Query 014642
Match_columns 421
No_of_seqs 146 out of 282
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 15:14:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eey_A Putative rRNA methylase 97.8 0.00018 6.3E-09 62.3 11.5 156 36-204 21-182 (197)
2 1ixk_A Methyltransferase; open 97.7 0.00038 1.3E-08 66.9 13.3 146 36-191 117-271 (315)
3 3cgg_A SAM-dependent methyltra 97.6 0.0005 1.7E-08 58.2 10.7 129 36-193 45-173 (195)
4 1yzh_A TRNA (guanine-N(7)-)-me 97.6 0.00075 2.6E-08 59.8 11.9 148 29-193 32-180 (214)
5 3dh0_A SAM dependent methyltra 97.5 0.001 3.5E-08 58.2 12.1 139 35-197 35-183 (219)
6 3evz_A Methyltransferase; NYSG 97.5 0.0011 3.9E-08 58.7 11.7 143 36-192 54-203 (230)
7 3mti_A RRNA methylase; SAM-dep 97.5 0.00079 2.7E-08 57.7 10.4 120 36-172 21-140 (185)
8 3lpm_A Putative methyltransfer 97.4 0.0011 3.8E-08 60.8 11.3 148 37-196 49-202 (259)
9 3kkz_A Uncharacterized protein 97.4 0.0021 7.1E-08 58.6 12.9 145 34-204 43-206 (267)
10 1g8a_A Fibrillarin-like PRE-rR 97.4 0.001 3.4E-08 59.2 10.3 135 35-196 71-213 (227)
11 2fca_A TRNA (guanine-N(7)-)-me 97.3 0.00099 3.4E-08 59.8 10.0 148 28-192 28-176 (213)
12 3f4k_A Putative methyltransfer 97.3 0.0025 8.6E-08 57.1 12.2 141 34-200 43-201 (257)
13 1ej0_A FTSJ; methyltransferase 97.3 0.00053 1.8E-08 56.5 7.1 117 35-171 20-140 (180)
14 2qm3_A Predicted methyltransfe 97.2 0.0033 1.1E-07 61.5 13.3 131 37-193 172-307 (373)
15 3bwc_A Spermidine synthase; SA 97.2 0.00075 2.6E-08 64.5 8.3 146 36-201 94-246 (304)
16 3ajd_A Putative methyltransfer 97.2 0.00049 1.7E-08 64.4 6.8 149 36-191 82-237 (274)
17 2pwy_A TRNA (adenine-N(1)-)-me 97.2 0.0017 5.9E-08 58.2 10.0 130 35-195 94-224 (258)
18 3hem_A Cyclopropane-fatty-acyl 97.2 0.0057 1.9E-07 56.9 13.7 138 36-197 71-245 (302)
19 3e23_A Uncharacterized protein 97.2 0.001 3.4E-08 58.3 7.9 135 32-198 38-185 (211)
20 2kw5_A SLR1183 protein; struct 97.2 0.0028 9.6E-08 54.9 10.5 139 31-198 24-174 (202)
21 2yxl_A PH0851 protein, 450AA l 97.2 0.0018 6E-08 65.3 10.5 149 35-191 257-415 (450)
22 2b3t_A Protein methyltransfera 97.1 0.0011 3.7E-08 61.5 8.3 140 36-191 108-259 (276)
23 4df3_A Fibrillarin-like rRNA/T 97.1 0.0031 1.1E-07 59.5 11.5 139 34-197 74-219 (233)
24 1kpg_A CFA synthase;, cyclopro 97.1 0.006 2E-07 56.0 12.9 129 36-196 63-229 (287)
25 3l8d_A Methyltransferase; stru 97.1 0.0068 2.3E-07 53.7 12.3 131 36-196 52-201 (242)
26 1fbn_A MJ fibrillarin homologu 97.0 0.004 1.4E-07 56.0 10.5 136 35-197 72-215 (230)
27 4dmg_A Putative uncharacterize 97.0 0.0023 7.7E-08 64.2 9.6 147 26-190 202-352 (393)
28 3e8s_A Putative SAM dependent 97.0 0.0052 1.8E-07 53.3 10.7 128 37-194 52-208 (227)
29 3k6r_A Putative transferase PH 97.0 0.0021 7.2E-08 62.0 8.9 127 34-190 122-252 (278)
30 2frn_A Hypothetical protein PH 97.0 0.0018 6.2E-08 60.8 8.1 126 36-191 124-253 (278)
31 3bus_A REBM, methyltransferase 96.9 0.019 6.7E-07 51.9 14.2 142 36-203 60-224 (273)
32 3h2b_A SAM-dependent methyltra 96.9 0.0093 3.2E-07 51.6 11.5 130 38-197 42-184 (203)
33 3dli_A Methyltransferase; PSI- 96.9 0.006 2.1E-07 54.6 10.5 133 32-197 36-186 (240)
34 1yb2_A Hypothetical protein TA 96.9 0.0016 5.4E-08 60.4 6.9 129 35-195 108-237 (275)
35 3m4x_A NOL1/NOP2/SUN family pr 96.9 0.0033 1.1E-07 64.6 9.6 148 36-192 104-260 (456)
36 1o54_A SAM-dependent O-methylt 96.9 0.0035 1.2E-07 57.9 9.0 128 36-195 111-239 (277)
37 3vc1_A Geranyl diphosphate 2-C 96.8 0.0065 2.2E-07 57.1 10.8 146 33-204 113-278 (312)
38 1wxx_A TT1595, hypothetical pr 96.8 0.0033 1.1E-07 61.8 8.9 157 29-201 202-363 (382)
39 1ve3_A Hypothetical protein PH 96.8 0.012 4.2E-07 51.3 11.4 106 36-169 37-144 (227)
40 1sqg_A SUN protein, FMU protei 96.8 0.006 2E-07 60.9 10.5 146 36-191 245-400 (429)
41 2ipx_A RRNA 2'-O-methyltransfe 96.8 0.0096 3.3E-07 53.3 10.7 136 35-197 75-219 (233)
42 1xxl_A YCGJ protein; structura 96.7 0.012 4.1E-07 52.9 11.4 134 35-195 19-174 (239)
43 3sm3_A SAM-dependent methyltra 96.7 0.013 4.6E-07 51.1 11.3 134 35-194 28-206 (235)
44 1dus_A MJ0882; hypothetical pr 96.7 0.011 3.8E-07 49.8 10.3 108 36-170 51-160 (194)
45 2o57_A Putative sarcosine dime 96.7 0.012 4.1E-07 54.2 11.3 135 34-196 79-235 (297)
46 2vdv_E TRNA (guanine-N(7)-)-me 96.7 0.0015 5E-08 59.6 5.1 141 30-186 31-191 (246)
47 3ujc_A Phosphoethanolamine N-m 96.7 0.0052 1.8E-07 54.9 8.4 137 35-197 53-208 (266)
48 3mb5_A SAM-dependent methyltra 96.7 0.0055 1.9E-07 55.2 8.6 131 36-197 92-224 (255)
49 3cc8_A Putative methyltransfer 96.7 0.029 9.8E-07 48.6 12.8 130 36-197 31-187 (230)
50 3grz_A L11 mtase, ribosomal pr 96.7 0.011 3.8E-07 51.5 10.2 126 36-194 59-184 (205)
51 4dzr_A Protein-(glutamine-N5) 96.6 0.0022 7.6E-08 55.2 5.3 145 36-191 29-188 (215)
52 3m6w_A RRNA methylase; rRNA me 96.6 0.0062 2.1E-07 62.8 9.5 147 36-192 100-256 (464)
53 2frx_A Hypothetical protein YE 96.6 0.01 3.5E-07 61.0 11.1 141 37-186 117-266 (479)
54 1y8c_A S-adenosylmethionine-de 96.6 0.01 3.5E-07 52.2 9.6 104 37-168 37-143 (246)
55 3ocj_A Putative exported prote 96.6 0.0058 2E-07 57.3 8.2 136 36-195 117-291 (305)
56 2fk8_A Methoxy mycolic acid sy 96.6 0.01 3.5E-07 55.5 9.8 103 36-169 89-196 (318)
57 2p7i_A Hypothetical protein; p 96.5 0.0056 1.9E-07 53.7 7.5 134 31-196 36-200 (250)
58 1vl5_A Unknown conserved prote 96.5 0.012 4.1E-07 53.2 9.8 131 36-195 36-190 (260)
59 1i9g_A Hypothetical protein RV 96.5 0.0084 2.9E-07 54.8 8.8 128 35-193 97-228 (280)
60 3dmg_A Probable ribosomal RNA 96.5 0.0026 8.8E-08 63.4 5.7 137 37-197 233-375 (381)
61 2b78_A Hypothetical protein SM 96.5 0.0034 1.2E-07 62.1 6.4 164 24-201 198-367 (385)
62 3g89_A Ribosomal RNA small sub 96.5 0.011 3.8E-07 54.9 9.5 134 36-196 79-213 (249)
63 3mgg_A Methyltransferase; NYSG 96.5 0.017 5.7E-07 52.5 10.6 136 35-195 35-198 (276)
64 2igt_A SAM dependent methyltra 96.5 0.0073 2.5E-07 58.8 8.6 141 37-190 153-299 (332)
65 3ckk_A TRNA (guanine-N(7)-)-me 96.4 0.0038 1.3E-07 57.5 6.0 137 38-190 47-190 (235)
66 2fhp_A Methylase, putative; al 96.4 0.0041 1.4E-07 52.8 5.7 119 34-173 41-160 (187)
67 3g5l_A Putative S-adenosylmeth 96.4 0.015 5.1E-07 52.2 9.6 132 37-197 44-218 (253)
68 3ou2_A SAM-dependent methyltra 96.4 0.044 1.5E-06 47.3 12.0 107 31-169 40-148 (218)
69 3bkx_A SAM-dependent methyltra 96.4 0.072 2.5E-06 48.2 13.9 138 35-195 41-219 (275)
70 1ri5_A MRNA capping enzyme; me 96.3 0.024 8.1E-07 51.6 10.4 137 36-196 63-251 (298)
71 3id6_C Fibrillarin-like rRNA/T 96.3 0.088 3E-06 49.3 14.4 138 35-198 74-219 (232)
72 1vlm_A SAM-dependent methyltra 96.3 0.013 4.6E-07 51.8 8.4 134 32-205 42-196 (219)
73 3dlc_A Putative S-adenosyl-L-m 96.3 0.012 3.9E-07 50.8 7.7 104 40-168 46-149 (219)
74 2ozv_A Hypothetical protein AT 96.2 0.0065 2.2E-07 56.3 6.5 147 37-194 36-193 (260)
75 1nkv_A Hypothetical protein YJ 96.2 0.017 5.7E-07 51.7 8.9 137 35-198 34-190 (256)
76 3g2m_A PCZA361.24; SAM-depende 96.2 0.012 4E-07 54.8 8.1 135 38-197 83-276 (299)
77 4dcm_A Ribosomal RNA large sub 96.2 0.0042 1.4E-07 61.5 5.4 136 38-193 223-366 (375)
78 1i1n_A Protein-L-isoaspartate 96.2 0.013 4.6E-07 51.7 8.1 108 35-172 75-187 (226)
79 3c0k_A UPF0064 protein YCCW; P 96.2 0.0039 1.3E-07 61.4 4.9 160 28-201 211-377 (396)
80 2zfu_A Nucleomethylin, cerebra 96.2 0.012 4.2E-07 51.4 7.5 115 32-192 62-176 (215)
81 2b25_A Hypothetical protein; s 96.2 0.023 7.9E-07 54.1 9.9 107 36-169 104-221 (336)
82 2as0_A Hypothetical protein PH 96.2 0.006 2.1E-07 59.9 6.0 149 29-190 208-361 (396)
83 2pjd_A Ribosomal RNA small sub 96.1 0.0038 1.3E-07 60.2 4.5 113 38-174 197-310 (343)
84 3dtn_A Putative methyltransfer 96.1 0.054 1.9E-06 47.8 11.7 108 35-168 42-149 (234)
85 3p9n_A Possible methyltransfer 96.1 0.045 1.5E-06 47.3 10.8 113 36-171 43-157 (189)
86 2ex4_A Adrenal gland protein A 96.1 0.012 4.2E-07 52.6 7.3 133 37-195 79-225 (241)
87 1xdz_A Methyltransferase GIDB; 96.1 0.02 6.8E-07 51.7 8.7 135 36-196 69-203 (240)
88 4fsd_A Arsenic methyltransfera 96.1 0.046 1.6E-06 53.4 11.8 139 36-194 82-250 (383)
89 3hnr_A Probable methyltransfer 96.1 0.051 1.7E-06 47.4 10.9 127 37-193 45-199 (220)
90 3d2l_A SAM-dependent methyltra 96.1 0.026 8.9E-07 49.8 9.1 104 35-167 31-137 (243)
91 2esr_A Methyltransferase; stru 96.0 0.011 3.7E-07 50.2 6.2 114 35-172 29-143 (177)
92 3hm2_A Precorrin-6Y C5,15-meth 96.0 0.041 1.4E-06 46.1 9.7 127 36-194 24-152 (178)
93 1l3i_A Precorrin-6Y methyltran 96.0 0.023 7.8E-07 47.8 8.0 122 35-189 31-154 (192)
94 1inl_A Spermidine synthase; be 96.0 0.01 3.4E-07 56.6 6.5 114 37-169 90-207 (296)
95 2nyu_A Putative ribosomal RNA 96.0 0.016 5.6E-07 49.7 7.2 116 35-170 20-148 (196)
96 4htf_A S-adenosylmethionine-de 96.0 0.025 8.6E-07 51.9 8.9 131 38-196 69-233 (285)
97 2r3s_A Uncharacterized protein 95.9 0.078 2.7E-06 49.6 12.3 135 36-195 164-323 (335)
98 1xtp_A LMAJ004091AAA; SGPP, st 95.9 0.016 5.3E-07 51.7 7.1 133 37-195 93-238 (254)
99 3bkw_A MLL3908 protein, S-aden 95.9 0.058 2E-06 47.5 10.4 103 36-167 42-144 (243)
100 3lcc_A Putative methyl chlorid 95.8 0.063 2.2E-06 47.7 10.7 135 39-198 68-210 (235)
101 1qzz_A RDMB, aclacinomycin-10- 95.8 0.11 3.9E-06 49.5 13.2 136 35-196 180-340 (374)
102 2b9e_A NOL1/NOP2/SUN domain fa 95.8 0.093 3.2E-06 50.8 12.4 148 36-191 101-261 (309)
103 3e05_A Precorrin-6Y C5,15-meth 95.8 0.26 8.7E-06 42.9 14.1 123 35-187 38-160 (204)
104 3i9f_A Putative type 11 methyl 95.8 0.067 2.3E-06 44.8 10.0 130 35-201 15-154 (170)
105 1jsx_A Glucose-inhibited divis 95.8 0.025 8.6E-07 49.0 7.5 125 37-196 65-189 (207)
106 3dxy_A TRNA (guanine-N(7)-)-me 95.7 0.014 4.6E-07 53.1 6.0 146 30-190 26-172 (218)
107 1nt2_A Fibrillarin-like PRE-rR 95.7 0.091 3.1E-06 47.3 11.3 136 35-197 55-197 (210)
108 2gpy_A O-methyltransferase; st 95.7 0.035 1.2E-06 49.5 8.4 106 36-166 53-159 (233)
109 2b2c_A Spermidine synthase; be 95.7 0.0077 2.6E-07 58.4 4.4 109 37-167 108-222 (314)
110 2p8j_A S-adenosylmethionine-de 95.7 0.028 9.5E-07 48.6 7.5 113 33-170 19-131 (209)
111 3duw_A OMT, O-methyltransferas 95.7 0.04 1.4E-06 48.6 8.6 111 34-166 55-166 (223)
112 2pt6_A Spermidine synthase; tr 95.6 0.0092 3.1E-07 57.8 4.7 112 37-169 116-232 (321)
113 3adn_A Spermidine synthase; am 95.6 0.045 1.5E-06 52.5 9.3 111 37-167 83-198 (294)
114 2pxx_A Uncharacterized protein 95.6 0.015 5.2E-07 50.0 5.4 121 36-170 41-162 (215)
115 2i7c_A Spermidine synthase; tr 95.6 0.0084 2.9E-07 56.7 4.1 110 37-167 78-192 (283)
116 3pfg_A N-methyltransferase; N, 95.5 0.071 2.4E-06 48.1 10.0 102 36-166 49-150 (263)
117 1uir_A Polyamine aminopropyltr 95.5 0.015 5.1E-07 55.9 5.8 111 37-167 77-195 (314)
118 3tma_A Methyltransferase; thum 95.5 0.19 6.4E-06 48.3 13.5 139 35-195 201-339 (354)
119 1ws6_A Methyltransferase; stru 95.5 0.028 9.7E-07 46.7 6.7 111 37-171 41-151 (171)
120 2xvm_A Tellurite resistance pr 95.5 0.039 1.3E-06 47.0 7.6 105 36-166 31-135 (199)
121 1mjf_A Spermidine synthase; sp 95.4 0.011 3.6E-07 55.8 4.2 107 37-167 75-193 (281)
122 2nxc_A L11 mtase, ribosomal pr 95.4 0.049 1.7E-06 50.2 8.6 123 36-194 119-243 (254)
123 2pbf_A Protein-L-isoaspartate 95.4 0.017 6E-07 51.0 5.3 110 35-170 78-196 (227)
124 3a27_A TYW2, uncharacterized p 95.4 0.02 6.8E-07 53.6 5.9 126 34-189 116-245 (272)
125 1x19_A CRTF-related protein; m 95.4 0.31 1.1E-05 46.6 14.3 135 35-195 188-348 (359)
126 3tfw_A Putative O-methyltransf 95.3 0.087 3E-06 48.2 10.0 109 34-166 60-169 (248)
127 3gwz_A MMCR; methyltransferase 95.3 0.21 7.1E-06 48.4 13.2 136 35-195 200-356 (369)
128 3tr6_A O-methyltransferase; ce 95.3 0.029 1E-06 49.4 6.4 110 34-166 61-173 (225)
129 3bxo_A N,N-dimethyltransferase 95.3 0.12 4E-06 45.4 10.3 100 36-167 39-141 (239)
130 2yvl_A TRMI protein, hypotheti 95.3 0.18 6.1E-06 44.8 11.6 103 36-169 90-192 (248)
131 3p2e_A 16S rRNA methylase; met 95.3 0.063 2.2E-06 48.9 8.8 145 37-198 24-188 (225)
132 3i53_A O-methyltransferase; CO 95.3 0.34 1.2E-05 45.7 14.1 135 36-196 168-322 (332)
133 2o07_A Spermidine synthase; st 95.2 0.026 8.8E-07 54.2 6.3 110 37-167 95-209 (304)
134 1iy9_A Spermidine synthase; ro 95.2 0.026 8.8E-07 53.2 6.1 110 37-167 75-189 (275)
135 2yxd_A Probable cobalt-precorr 95.2 0.2 6.8E-06 41.7 10.9 121 36-192 34-154 (183)
136 1tw3_A COMT, carminomycin 4-O- 95.2 0.17 5.7E-06 48.2 11.7 136 35-196 181-340 (360)
137 2plw_A Ribosomal RNA methyltra 95.1 0.088 3E-06 45.4 8.9 126 35-183 20-168 (201)
138 3gu3_A Methyltransferase; alph 95.1 0.21 7.2E-06 46.1 11.9 109 34-169 19-128 (284)
139 2ift_A Putative methylase HI07 95.1 0.096 3.3E-06 46.3 9.2 113 36-171 52-167 (201)
140 1wzn_A SAM-dependent methyltra 95.0 0.066 2.3E-06 47.8 8.0 106 37-168 41-146 (252)
141 2fpo_A Methylase YHHF; structu 94.9 0.07 2.4E-06 47.2 7.8 111 37-172 54-165 (202)
142 3njr_A Precorrin-6Y methylase; 94.9 0.36 1.2E-05 42.9 12.4 125 36-194 54-179 (204)
143 1xj5_A Spermidine synthase 1; 94.9 0.027 9.2E-07 55.2 5.4 113 36-167 119-235 (334)
144 1wy7_A Hypothetical protein PH 94.8 0.1 3.5E-06 45.3 8.5 128 37-196 49-176 (207)
145 3gjy_A Spermidine synthase; AP 94.8 0.015 5.1E-07 57.3 3.4 113 40-171 92-204 (317)
146 2yxe_A Protein-L-isoaspartate 94.7 0.19 6.6E-06 43.8 10.1 106 35-170 75-180 (215)
147 2avd_A Catechol-O-methyltransf 94.7 0.043 1.5E-06 48.5 5.8 111 33-166 65-178 (229)
148 2ip2_A Probable phenazine-spec 94.7 0.32 1.1E-05 45.7 12.0 133 35-194 166-321 (334)
149 3ofk_A Nodulation protein S; N 94.6 0.037 1.3E-06 48.3 5.0 108 36-170 50-157 (216)
150 3g5t_A Trans-aconitate 3-methy 94.5 0.21 7.1E-06 46.3 10.3 108 37-165 36-147 (299)
151 3u81_A Catechol O-methyltransf 94.5 0.31 1.1E-05 43.2 10.8 115 34-169 55-172 (221)
152 3ccf_A Cyclopropane-fatty-acyl 94.5 0.26 8.8E-06 45.1 10.6 101 36-169 56-156 (279)
153 2i62_A Nicotinamide N-methyltr 94.4 0.092 3.1E-06 46.8 7.3 148 37-196 56-240 (265)
154 2hnk_A SAM-dependent O-methylt 94.4 0.054 1.9E-06 48.7 5.8 110 35-167 58-181 (239)
155 3dr5_A Putative O-methyltransf 94.3 0.11 3.7E-06 47.2 7.7 102 39-165 58-161 (221)
156 2fyt_A Protein arginine N-meth 94.3 0.12 4.3E-06 49.9 8.6 105 35-164 62-168 (340)
157 3m70_A Tellurite resistance pr 94.3 0.079 2.7E-06 48.6 6.8 103 37-167 120-223 (286)
158 3mcz_A O-methyltransferase; ad 94.3 0.19 6.6E-06 47.6 9.6 133 38-192 180-336 (352)
159 3q7e_A Protein arginine N-meth 94.2 0.098 3.4E-06 50.7 7.6 106 36-164 65-170 (349)
160 2ih2_A Modification methylase 94.2 0.13 4.3E-06 49.9 8.3 131 37-187 39-186 (421)
161 3fpf_A Mtnas, putative unchara 94.2 0.63 2.1E-05 45.5 13.3 107 33-170 118-225 (298)
162 1dl5_A Protein-L-isoaspartate 94.1 0.17 5.9E-06 48.0 8.8 103 36-168 74-176 (317)
163 3bzb_A Uncharacterized protein 94.1 0.79 2.7E-05 42.7 13.2 138 36-195 78-237 (281)
164 3v97_A Ribosomal RNA large sub 94.0 0.1 3.4E-06 56.1 7.9 151 26-192 528-679 (703)
165 4e2x_A TCAB9; kijanose, tetron 94.0 0.1 3.5E-06 50.9 7.3 127 36-195 106-253 (416)
166 2yx1_A Hypothetical protein MJ 94.0 0.14 4.8E-06 49.5 8.1 102 36-171 194-295 (336)
167 3c3p_A Methyltransferase; NP_9 93.9 0.16 5.3E-06 44.6 7.6 104 36-166 55-159 (210)
168 3lst_A CALO1 methyltransferase 93.8 0.35 1.2E-05 46.3 10.4 132 35-194 182-335 (348)
169 3dou_A Ribosomal RNA large sub 93.7 0.2 6.7E-06 44.5 8.0 115 34-171 22-143 (191)
170 1sui_A Caffeoyl-COA O-methyltr 93.7 0.21 7.2E-06 45.9 8.4 110 34-166 76-189 (247)
171 1r18_A Protein-L-isoaspartate( 93.6 0.35 1.2E-05 42.9 9.5 106 35-170 82-197 (227)
172 4gek_A TRNA (CMO5U34)-methyltr 93.6 0.2 6.9E-06 46.8 8.2 110 36-169 69-180 (261)
173 3r0q_C Probable protein argini 93.6 0.089 3E-06 51.6 6.0 110 34-168 60-170 (376)
174 3g07_A 7SK snRNA methylphospha 93.5 0.14 4.7E-06 48.0 6.9 34 37-71 46-79 (292)
175 2cmg_A Spermidine synthase; tr 93.5 0.13 4.4E-06 48.4 6.7 96 37-167 72-171 (262)
176 3jwh_A HEN1; methyltransferase 93.5 0.3 1E-05 42.7 8.7 110 36-168 28-142 (217)
177 1o9g_A RRNA methyltransferase; 93.4 0.24 8.2E-06 44.7 8.2 120 37-166 51-213 (250)
178 3ntv_A MW1564 protein; rossman 93.4 0.31 1.1E-05 43.8 8.9 103 36-165 70-174 (232)
179 2avn_A Ubiquinone/menaquinone 93.4 0.1 3.5E-06 47.4 5.7 101 37-169 54-154 (260)
180 3dp7_A SAM-dependent methyltra 93.3 0.48 1.6E-05 45.8 10.6 107 36-167 178-287 (363)
181 3r3h_A O-methyltransferase, SA 93.3 0.06 2.1E-06 49.5 4.0 110 34-166 57-169 (242)
182 3cbg_A O-methyltransferase; cy 93.3 0.14 4.9E-06 46.1 6.5 108 36-166 71-181 (232)
183 2gs9_A Hypothetical protein TT 93.2 0.26 8.8E-06 42.7 7.8 100 37-170 36-135 (211)
184 2bm8_A Cephalosporin hydroxyla 93.1 0.28 9.6E-06 44.8 8.2 103 37-167 81-187 (236)
185 3mq2_A 16S rRNA methyltransfer 93.1 0.17 5.8E-06 44.3 6.5 141 36-198 26-187 (218)
186 1jg1_A PIMT;, protein-L-isoasp 92.9 0.46 1.6E-05 42.5 9.2 105 35-171 89-193 (235)
187 1g6q_1 HnRNP arginine N-methyl 92.9 0.22 7.6E-06 47.7 7.6 105 36-164 37-142 (328)
188 3c3y_A Pfomt, O-methyltransfer 92.9 0.14 4.7E-06 46.7 5.7 108 34-166 67-180 (237)
189 2ld4_A Anamorsin; methyltransf 92.9 0.37 1.3E-05 40.9 8.1 111 36-187 11-128 (176)
190 3q87_B N6 adenine specific DNA 92.9 0.49 1.7E-05 40.6 9.0 125 37-193 23-147 (170)
191 3jwg_A HEN1, methyltransferase 92.8 0.54 1.9E-05 41.0 9.4 110 36-168 28-142 (219)
192 2h00_A Methyltransferase 10 do 92.8 1.9 6.6E-05 38.7 13.2 150 37-195 65-238 (254)
193 1pjz_A Thiopurine S-methyltran 92.8 0.75 2.6E-05 40.5 10.3 135 36-196 21-177 (203)
194 3lbf_A Protein-L-isoaspartate 92.8 0.52 1.8E-05 40.8 9.1 103 35-170 75-177 (210)
195 2yqz_A Hypothetical protein TT 92.8 0.28 9.7E-06 43.6 7.5 107 34-168 36-142 (263)
196 3ege_A Putative methyltransfer 92.7 0.95 3.3E-05 41.0 11.1 125 36-196 33-179 (261)
197 3o4f_A Spermidine synthase; am 92.6 0.11 3.9E-06 50.7 5.1 114 37-166 83-197 (294)
198 1nv8_A HEMK protein; class I a 92.3 0.49 1.7E-05 44.7 8.9 117 37-169 123-251 (284)
199 2y1w_A Histone-arginine methyl 92.3 0.52 1.8E-05 45.5 9.3 107 37-169 50-157 (348)
200 2gb4_A Thiopurine S-methyltran 92.3 0.96 3.3E-05 42.0 10.7 134 37-195 68-227 (252)
201 3bgv_A MRNA CAP guanine-N7 met 92.2 0.78 2.7E-05 42.8 10.1 116 37-170 34-158 (313)
202 2p35_A Trans-aconitate 2-methy 92.0 0.74 2.5E-05 40.9 9.2 103 36-169 32-134 (259)
203 1ne2_A Hypothetical protein TA 91.9 0.66 2.3E-05 40.1 8.6 117 37-192 51-167 (200)
204 1zx0_A Guanidinoacetate N-meth 91.7 0.086 2.9E-06 47.2 2.8 109 36-166 59-169 (236)
205 1p91_A Ribosomal RNA large sub 91.5 0.28 9.5E-06 44.4 5.9 98 36-170 84-181 (269)
206 1uwv_A 23S rRNA (uracil-5-)-me 91.5 2.4 8.1E-05 42.4 13.2 137 36-205 285-422 (433)
207 3ggd_A SAM-dependent methyltra 91.0 0.53 1.8E-05 41.8 7.3 111 34-168 53-164 (245)
208 1vbf_A 231AA long hypothetical 90.9 0.74 2.5E-05 40.5 8.0 100 35-170 68-168 (231)
209 3c6k_A Spermine synthase; sper 90.7 0.11 3.6E-06 52.8 2.6 119 38-164 206-328 (381)
210 3m33_A Uncharacterized protein 90.6 0.9 3.1E-05 40.3 8.4 118 36-194 47-166 (226)
211 1fp1_D Isoliquiritigenin 2'-O- 90.6 0.73 2.5E-05 44.4 8.3 99 35-166 207-305 (372)
212 3iv6_A Putative Zn-dependent a 90.5 0.81 2.8E-05 43.4 8.4 109 35-171 43-152 (261)
213 2qfm_A Spermine synthase; sper 90.1 0.15 5.2E-06 51.3 3.2 119 37-169 188-316 (364)
214 3axs_A Probable N(2),N(2)-dime 90.0 0.22 7.7E-06 50.1 4.3 124 38-188 53-179 (392)
215 2aot_A HMT, histamine N-methyl 89.7 0.82 2.8E-05 42.3 7.6 116 37-169 52-174 (292)
216 2xyq_A Putative 2'-O-methyl tr 89.7 0.77 2.6E-05 44.3 7.6 127 35-193 61-195 (290)
217 2g72_A Phenylethanolamine N-me 89.3 3.6 0.00012 37.7 11.6 147 37-196 71-257 (289)
218 4a6d_A Hydroxyindole O-methylt 89.1 2.9 9.9E-05 40.4 11.2 135 34-194 176-333 (353)
219 2p41_A Type II methyltransfera 88.8 0.42 1.4E-05 46.0 5.0 112 34-170 79-194 (305)
220 3thr_A Glycine N-methyltransfe 88.7 0.25 8.6E-06 45.1 3.3 115 36-169 56-177 (293)
221 4fzv_A Putative methyltransfer 88.4 1.8 6.3E-05 43.0 9.5 120 52-180 163-297 (359)
222 3orh_A Guanidinoacetate N-meth 88.3 0.42 1.4E-05 43.4 4.4 109 36-165 59-168 (236)
223 2jjq_A Uncharacterized RNA met 87.9 2.8 9.6E-05 42.2 10.6 128 35-203 288-415 (425)
224 3tm4_A TRNA (guanine N2-)-meth 87.4 3 0.0001 40.7 10.2 136 35-196 215-353 (373)
225 1u2z_A Histone-lysine N-methyl 86.3 2.6 8.8E-05 43.0 9.4 112 36-166 241-358 (433)
226 3bt7_A TRNA (uracil-5-)-methyl 86.0 1.4 4.7E-05 43.0 6.9 134 38-205 214-359 (369)
227 2a14_A Indolethylamine N-methy 85.4 2.4 8.1E-05 38.8 7.8 145 37-196 55-239 (263)
228 1zg3_A Isoflavanone 4'-O-methy 84.6 3.1 0.00011 39.7 8.5 126 36-194 192-346 (358)
229 3b3j_A Histone-arginine methyl 84.5 1.5 5.2E-05 44.9 6.7 104 37-167 158-263 (480)
230 2dul_A N(2),N(2)-dimethylguano 83.9 1.2 4.2E-05 44.2 5.5 105 37-169 47-166 (378)
231 3kr9_A SAM-dependent methyltra 83.3 11 0.00038 35.0 11.5 124 37-192 15-140 (225)
232 3llv_A Exopolyphosphatase-rela 83.1 2.5 8.7E-05 34.6 6.3 73 38-125 6-79 (141)
233 1fp2_A Isoflavone O-methyltran 83.0 9.1 0.00031 36.3 11.0 100 35-167 186-288 (352)
234 3reo_A (ISO)eugenol O-methyltr 82.9 12 0.00042 36.0 12.1 128 35-195 201-355 (368)
235 2h1r_A Dimethyladenosine trans 82.7 4.6 0.00016 38.2 8.8 78 36-128 41-118 (299)
236 3gdh_A Trimethylguanosine synt 82.1 3.1 0.0001 36.8 6.9 79 37-129 78-157 (241)
237 3p9c_A Caffeic acid O-methyltr 81.1 21 0.00071 34.5 12.9 128 35-195 199-353 (364)
238 3s2e_A Zinc-containing alcohol 80.1 2.7 9.1E-05 39.8 6.1 98 35-166 164-262 (340)
239 4dvj_A Putative zinc-dependent 79.6 4.6 0.00016 38.9 7.7 96 37-166 171-269 (363)
240 3two_A Mannitol dehydrogenase; 78.9 9.3 0.00032 36.2 9.5 116 35-192 174-291 (348)
241 2f8l_A Hypothetical protein LM 78.5 5.1 0.00017 38.3 7.5 118 37-170 130-259 (344)
242 4hc4_A Protein arginine N-meth 77.0 5 0.00017 40.1 7.3 109 37-170 83-199 (376)
243 1pl8_A Human sorbitol dehydrog 76.5 7.5 0.00026 37.1 8.1 100 34-166 168-272 (356)
244 3gnl_A Uncharacterized protein 76.1 21 0.0007 33.8 10.9 124 37-192 21-146 (244)
245 3gru_A Dimethyladenosine trans 74.0 11 0.00038 36.2 8.6 77 36-127 49-125 (295)
246 3hp7_A Hemolysin, putative; st 73.8 30 0.001 33.4 11.6 127 37-194 85-231 (291)
247 3lec_A NADB-rossmann superfami 73.7 39 0.0013 31.5 12.0 130 37-197 21-152 (230)
248 4ej6_A Putative zinc-binding d 72.0 7.5 0.00026 37.5 6.9 100 34-166 179-283 (370)
249 2vdw_A Vaccinia virus capping 70.9 9.6 0.00033 36.2 7.3 107 38-168 49-170 (302)
250 4hg2_A Methyltransferase type 69.3 11 0.00039 34.9 7.3 103 31-168 32-136 (257)
251 1e3i_A Alcohol dehydrogenase, 68.6 16 0.00054 35.0 8.4 99 34-165 192-295 (376)
252 3uko_A Alcohol dehydrogenase c 68.3 21 0.00073 34.2 9.2 100 34-166 190-294 (378)
253 1p0f_A NADP-dependent alcohol 68.0 18 0.00063 34.5 8.7 99 35-166 189-292 (373)
254 1wma_A Carbonyl reductase [NAD 67.8 5.5 0.00019 35.2 4.6 78 37-123 3-89 (276)
255 1zq9_A Probable dimethyladenos 67.5 20 0.00069 33.5 8.6 78 36-128 27-105 (285)
256 3ijr_A Oxidoreductase, short c 66.8 30 0.001 32.0 9.6 122 38-167 47-182 (291)
257 2zig_A TTHA0409, putative modi 65.6 11 0.00038 35.4 6.4 103 93-197 19-138 (297)
258 3jv7_A ADH-A; dehydrogenase, n 65.4 7.4 0.00025 36.8 5.2 99 34-166 168-269 (345)
259 3ek2_A Enoyl-(acyl-carrier-pro 65.4 13 0.00043 33.3 6.5 80 33-124 9-100 (271)
260 3v2g_A 3-oxoacyl-[acyl-carrier 65.4 32 0.0011 31.5 9.5 121 38-166 31-164 (271)
261 1e3j_A NADP(H)-dependent ketos 65.2 17 0.00059 34.4 7.8 98 35-166 166-270 (352)
262 3jyn_A Quinone oxidoreductase; 64.6 14 0.00049 34.6 7.0 121 34-189 137-261 (325)
263 1f8f_A Benzyl alcohol dehydrog 64.3 13 0.00045 35.5 6.8 98 35-165 188-287 (371)
264 2qe6_A Uncharacterized protein 64.2 64 0.0022 29.8 11.4 110 38-170 78-199 (274)
265 2fzw_A Alcohol dehydrogenase c 63.6 21 0.00071 34.1 8.1 100 34-166 187-291 (373)
266 3goh_A Alcohol dehydrogenase, 63.3 9.3 0.00032 35.6 5.4 88 35-166 140-228 (315)
267 2jhf_A Alcohol dehydrogenase E 62.0 26 0.0009 33.4 8.5 100 34-166 188-292 (374)
268 1cdo_A Alcohol dehydrogenase; 61.6 27 0.00093 33.3 8.5 100 34-166 189-293 (374)
269 3r3s_A Oxidoreductase; structu 60.3 37 0.0013 31.4 9.0 123 38-167 49-185 (294)
270 3c85_A Putative glutathione-re 59.9 14 0.00046 31.6 5.5 74 38-125 39-114 (183)
271 3oig_A Enoyl-[acyl-carrier-pro 59.9 43 0.0015 29.9 9.1 121 38-167 7-147 (266)
272 3fwz_A Inner membrane protein 59.7 23 0.00079 29.1 6.7 74 38-126 7-81 (140)
273 3opn_A Putative hemolysin; str 59.4 31 0.001 31.4 8.1 126 37-193 37-182 (232)
274 3ip1_A Alcohol dehydrogenase, 59.3 24 0.00081 34.3 7.7 76 34-122 210-288 (404)
275 2wa2_A Non-structural protein 59.1 20 0.00067 33.9 6.9 114 35-174 80-198 (276)
276 1boo_A Protein (N-4 cytosine-s 57.4 18 0.0006 34.7 6.3 97 98-196 17-121 (323)
277 3htx_A HEN1; HEN1, small RNA m 57.0 1E+02 0.0034 35.0 12.9 110 37-168 721-835 (950)
278 1pqw_A Polyketide synthase; ro 56.8 14 0.00047 31.8 5.0 94 35-165 36-135 (198)
279 1piw_A Hypothetical zinc-type 56.5 14 0.00046 35.3 5.4 97 34-165 176-274 (360)
280 2oxt_A Nucleoside-2'-O-methylt 56.1 22 0.00075 33.3 6.6 116 34-175 71-191 (265)
281 3o38_A Short chain dehydrogena 56.0 13 0.00046 33.3 5.0 80 37-124 21-109 (266)
282 3s1s_A Restriction endonucleas 55.3 36 0.0012 38.1 9.1 129 37-171 321-469 (878)
283 3grk_A Enoyl-(acyl-carrier-pro 55.1 54 0.0019 30.3 9.1 121 37-166 30-168 (293)
284 4b7c_A Probable oxidoreductase 55.0 17 0.00057 34.1 5.6 98 34-166 146-247 (336)
285 4eez_A Alcohol dehydrogenase 1 54.2 25 0.00086 32.9 6.7 99 35-166 161-262 (348)
286 3l9w_A Glutathione-regulated p 53.9 15 0.00052 36.8 5.4 75 37-126 3-78 (413)
287 3is3_A 17BETA-hydroxysteroid d 53.6 99 0.0034 27.9 10.5 124 37-168 17-153 (270)
288 3fpc_A NADP-dependent alcohol 53.6 19 0.00064 34.2 5.8 100 34-166 163-265 (352)
289 4a2c_A Galactitol-1-phosphate 53.1 38 0.0013 31.6 7.8 100 35-167 158-260 (346)
290 2c0c_A Zinc binding alcohol de 53.0 18 0.0006 34.7 5.5 97 34-165 160-259 (362)
291 3fbg_A Putative arginate lyase 52.8 16 0.00055 34.6 5.2 94 37-165 150-246 (346)
292 2aef_A Calcium-gated potassium 52.4 23 0.00078 31.4 5.9 76 33-125 4-80 (234)
293 3nrc_A Enoyl-[acyl-carrier-pro 51.1 55 0.0019 29.8 8.4 74 38-124 26-111 (280)
294 3uog_A Alcohol dehydrogenase; 50.8 14 0.00048 35.4 4.4 98 34-166 186-286 (363)
295 3sju_A Keto reductase; short-c 50.1 20 0.00067 33.0 5.2 87 29-124 15-109 (279)
296 2dph_A Formaldehyde dismutase; 50.0 25 0.00087 34.0 6.2 112 34-165 182-297 (398)
297 3ldg_A Putative uncharacterize 49.0 1.1E+02 0.0039 30.1 10.8 103 64-193 258-360 (384)
298 3e8x_A Putative NAD-dependent 48.2 1.3E+02 0.0045 26.0 10.1 135 38-194 21-170 (236)
299 3k31_A Enoyl-(acyl-carrier-pro 47.5 58 0.002 30.1 8.0 117 38-166 30-167 (296)
300 3ksu_A 3-oxoacyl-acyl carrier 47.3 1.2E+02 0.0041 27.3 9.9 124 38-167 11-147 (262)
301 3h28_A Sulfide-quinone reducta 46.2 10 0.00034 36.9 2.7 43 86-128 206-256 (430)
302 3ius_A Uncharacterized conserv 46.2 50 0.0017 29.5 7.1 69 39-128 6-75 (286)
303 1uuf_A YAHK, zinc-type alcohol 46.0 26 0.00089 33.8 5.5 95 34-165 191-286 (369)
304 3bed_A PTS system, IIA compone 45.8 35 0.0012 29.0 5.7 58 39-101 6-70 (142)
305 2qy6_A UPF0209 protein YFCK; s 45.5 51 0.0017 30.8 7.3 136 38-192 61-232 (257)
306 3uwp_A Histone-lysine N-methyl 44.8 1.2E+02 0.004 31.4 10.3 119 36-179 172-298 (438)
307 2r6z_A UPF0341 protein in RSP 44.4 67 0.0023 29.8 7.9 84 37-126 83-171 (258)
308 3tqs_A Ribosomal RNA small sub 44.2 61 0.0021 30.1 7.6 93 36-153 28-120 (255)
309 1id1_A Putative potassium chan 44.2 61 0.0021 26.7 6.9 77 38-125 3-80 (153)
310 1zsy_A Mitochondrial 2-enoyl t 44.1 78 0.0027 30.0 8.5 100 34-166 164-269 (357)
311 3awd_A GOX2181, putative polyo 43.6 49 0.0017 29.2 6.5 78 38-124 13-98 (260)
312 2okc_A Type I restriction enzy 43.5 37 0.0013 33.7 6.3 122 37-170 171-310 (445)
313 1g0o_A Trihydroxynaphthalene r 43.4 96 0.0033 28.1 8.7 79 38-124 29-115 (283)
314 3sso_A Methyltransferase; macr 43.0 29 0.001 35.6 5.6 99 37-166 216-323 (419)
315 1ja9_A 4HNR, 1,3,6,8-tetrahydr 42.7 41 0.0014 29.8 5.9 80 37-124 20-107 (274)
316 3lyl_A 3-oxoacyl-(acyl-carrier 42.5 34 0.0012 30.2 5.4 77 38-123 5-89 (247)
317 1m6y_A S-adenosyl-methyltransf 42.4 22 0.00075 34.2 4.4 82 37-126 26-108 (301)
318 2vn8_A Reticulon-4-interacting 41.6 84 0.0029 30.0 8.3 96 35-165 181-278 (375)
319 3edm_A Short chain dehydrogena 41.3 1E+02 0.0035 27.7 8.4 79 38-124 8-94 (259)
320 3qiv_A Short-chain dehydrogena 40.9 35 0.0012 30.2 5.2 78 38-124 9-94 (253)
321 3ldu_A Putative methylase; str 40.7 1.5E+02 0.0052 29.0 10.2 102 64-194 259-362 (385)
322 4fs3_A Enoyl-[acyl-carrier-pro 40.6 1.3E+02 0.0043 27.3 9.0 78 37-125 5-95 (256)
323 3d7l_A LIN1944 protein; APC893 40.4 19 0.00065 30.6 3.2 33 39-72 4-36 (202)
324 3gaz_A Alcohol dehydrogenase s 40.0 51 0.0017 31.2 6.4 93 35-166 148-245 (343)
325 3k0b_A Predicted N6-adenine-sp 39.8 1.5E+02 0.005 29.3 10.0 104 64-194 265-368 (393)
326 4e3z_A Putative oxidoreductase 38.9 47 0.0016 29.9 5.8 88 28-123 16-111 (272)
327 2d8a_A PH0655, probable L-thre 38.6 47 0.0016 31.3 6.0 96 37-165 167-265 (348)
328 1tt7_A YHFP; alcohol dehydroge 38.1 43 0.0015 31.2 5.6 95 36-165 148-245 (330)
329 1xa0_A Putative NADPH dependen 37.4 31 0.0011 32.2 4.4 93 36-165 147-244 (328)
330 3o26_A Salutaridine reductase; 37.1 46 0.0016 29.9 5.4 79 37-124 11-99 (311)
331 1g60_A Adenine-specific methyl 37.0 46 0.0016 30.5 5.5 83 113-198 20-102 (260)
332 3sx6_A Sulfide-quinone reducta 36.9 14 0.00047 36.1 2.0 43 86-128 214-269 (437)
333 2cdc_A Glucose dehydrogenase g 36.8 63 0.0022 30.7 6.6 95 38-166 181-277 (366)
334 2hmt_A YUAA protein; RCK, KTN, 35.9 52 0.0018 25.9 5.0 74 38-126 6-80 (144)
335 2ae2_A Protein (tropinone redu 35.6 68 0.0023 28.7 6.3 78 38-124 9-95 (260)
336 3rkr_A Short chain oxidoreduct 35.3 38 0.0013 30.4 4.6 78 38-124 29-114 (262)
337 2b5w_A Glucose dehydrogenase; 35.3 65 0.0022 30.5 6.4 96 39-166 174-272 (357)
338 1yb1_A 17-beta-hydroxysteroid 35.2 41 0.0014 30.4 4.8 78 38-124 31-116 (272)
339 1gee_A Glucose 1-dehydrogenase 34.8 1.2E+02 0.0042 26.6 7.8 79 38-124 7-93 (261)
340 1kol_A Formaldehyde dehydrogen 34.2 64 0.0022 31.0 6.2 111 34-165 182-298 (398)
341 1yub_A Ermam, rRNA methyltrans 34.1 9.6 0.00033 34.4 0.3 108 36-167 28-145 (245)
342 4da9_A Short-chain dehydrogena 33.3 1.2E+02 0.0041 27.7 7.7 79 38-124 29-115 (280)
343 1wly_A CAAR, 2-haloacrylate re 33.1 50 0.0017 30.9 5.1 97 34-165 142-242 (333)
344 1af7_A Chemotaxis receptor met 32.9 43 0.0015 31.6 4.7 46 114-171 211-256 (274)
345 1v3u_A Leukotriene B4 12- hydr 32.8 73 0.0025 29.6 6.2 95 34-165 142-242 (333)
346 4dup_A Quinone oxidoreductase; 32.7 37 0.0013 32.3 4.2 97 35-166 165-264 (353)
347 1mio_B Nitrogenase molybdenum 32.0 47 0.0016 33.5 5.0 65 35-107 309-378 (458)
348 3slk_A Polyketide synthase ext 32.0 1.1E+02 0.0038 33.1 8.2 84 34-123 526-618 (795)
349 2pjd_A Ribosomal RNA small sub 31.2 74 0.0025 30.2 6.0 93 39-168 21-113 (343)
350 4iin_A 3-ketoacyl-acyl carrier 31.2 64 0.0022 29.1 5.4 79 38-124 29-115 (271)
351 3ucx_A Short chain dehydrogena 31.2 2.1E+02 0.0072 25.6 8.8 79 37-124 10-96 (264)
352 2pd4_A Enoyl-[acyl-carrier-pro 31.0 1.3E+02 0.0044 27.1 7.4 78 38-124 6-92 (275)
353 3h7a_A Short chain dehydrogena 30.9 83 0.0028 28.2 6.0 78 38-124 7-91 (252)
354 2eih_A Alcohol dehydrogenase; 30.8 42 0.0014 31.6 4.2 96 35-165 164-263 (343)
355 1qsg_A Enoyl-[acyl-carrier-pro 30.7 79 0.0027 28.3 5.9 75 38-124 9-95 (265)
356 3nx4_A Putative oxidoreductase 30.6 71 0.0024 29.5 5.7 90 40-166 149-240 (324)
357 2p91_A Enoyl-[acyl-carrier-pro 30.5 2E+02 0.0069 26.0 8.7 75 38-124 21-107 (285)
358 1xq1_A Putative tropinone redu 30.4 48 0.0016 29.5 4.3 78 38-124 14-100 (266)
359 4ibo_A Gluconate dehydrogenase 30.4 51 0.0018 30.1 4.6 78 38-124 26-111 (271)
360 3tjr_A Short chain dehydrogena 30.2 78 0.0027 29.3 5.9 79 37-124 30-116 (301)
361 1lnq_A MTHK channels, potassiu 30.1 38 0.0013 31.9 3.7 70 38-124 115-185 (336)
362 4a0s_A Octenoyl-COA reductase/ 30.0 69 0.0024 31.4 5.8 53 34-100 217-271 (447)
363 2j3h_A NADP-dependent oxidored 29.8 74 0.0025 29.7 5.7 96 35-165 153-253 (345)
364 1sby_A Alcohol dehydrogenase; 29.7 2.3E+02 0.0079 24.9 8.7 76 38-124 5-92 (254)
365 1jvb_A NAD(H)-dependent alcoho 29.4 88 0.003 29.4 6.2 98 34-165 167-269 (347)
366 2b4q_A Rhamnolipids biosynthes 29.2 68 0.0023 29.3 5.2 78 38-124 29-113 (276)
367 1pdo_A Mannose permease; phosp 29.2 46 0.0016 28.0 3.7 57 40-101 3-67 (135)
368 3tqh_A Quinone oxidoreductase; 29.0 60 0.0021 30.2 4.9 93 34-166 149-244 (321)
369 3gk3_A Acetoacetyl-COA reducta 28.8 76 0.0026 28.6 5.4 80 37-124 24-111 (269)
370 3pxx_A Carveol dehydrogenase; 28.7 3.1E+02 0.011 24.4 11.2 121 38-166 10-152 (287)
371 2pju_A Propionate catabolism o 28.7 91 0.0031 28.9 6.0 53 39-100 107-160 (225)
372 1h2b_A Alcohol dehydrogenase; 28.3 59 0.002 31.0 4.8 74 34-122 183-260 (359)
373 3lfh_A Manxa, phosphotransfera 28.2 1.4E+02 0.0047 25.7 6.7 55 40-99 5-68 (144)
374 2hcy_A Alcohol dehydrogenase 1 28.1 1.1E+02 0.0038 28.7 6.7 95 35-165 167-267 (347)
375 3u5t_A 3-oxoacyl-[acyl-carrier 28.1 3E+02 0.01 24.9 9.4 80 37-124 26-113 (267)
376 1qor_A Quinone oxidoreductase; 28.1 38 0.0013 31.6 3.3 97 34-165 137-237 (327)
377 3aek_A Light-independent proto 28.0 31 0.0011 34.6 2.9 38 35-72 304-343 (437)
378 1xu9_A Corticosteroid 11-beta- 28.0 58 0.002 29.5 4.5 78 37-123 27-113 (286)
379 4ggo_A Trans-2-enoyl-COA reduc 27.8 31 0.0011 35.2 2.8 87 37-123 49-147 (401)
380 3krt_A Crotonyl COA reductase; 27.7 59 0.002 32.2 4.8 98 34-166 225-343 (456)
381 4fn4_A Short chain dehydrogena 27.5 78 0.0027 29.6 5.4 77 38-123 7-91 (254)
382 4dcm_A Ribosomal RNA large sub 27.3 1.9E+02 0.0064 28.2 8.3 99 38-170 39-139 (375)
383 3a28_C L-2.3-butanediol dehydr 27.3 97 0.0033 27.6 5.8 78 38-124 2-89 (258)
384 3cvo_A Methyltransferase-like 27.1 3.6E+02 0.012 24.5 10.3 96 36-163 29-150 (202)
385 3fut_A Dimethyladenosine trans 27.0 1.4E+02 0.0049 28.0 7.2 77 36-128 46-122 (271)
386 3ipr_A PTS system, IIA compone 27.0 88 0.003 27.0 5.2 57 40-101 3-67 (150)
387 3uf0_A Short-chain dehydrogena 26.9 1.3E+02 0.0045 27.4 6.7 76 38-123 31-113 (273)
388 3svt_A Short-chain type dehydr 26.7 1.2E+02 0.004 27.5 6.3 78 38-124 11-99 (281)
389 3l77_A Short-chain alcohol deh 26.2 1.4E+02 0.0049 25.8 6.6 78 38-124 2-88 (235)
390 1ae1_A Tropinone reductase-I; 26.1 90 0.0031 28.2 5.4 78 38-124 21-107 (273)
391 4eso_A Putative oxidoreductase 26.1 1.2E+02 0.0041 27.2 6.3 76 38-124 8-90 (255)
392 2uvd_A 3-oxoacyl-(acyl-carrier 25.7 88 0.003 27.7 5.2 78 38-123 4-89 (246)
393 3gpi_A NAD-dependent epimerase 25.6 93 0.0032 27.8 5.4 68 38-124 3-71 (286)
394 2dq4_A L-threonine 3-dehydroge 25.4 83 0.0028 29.6 5.2 95 37-165 164-260 (343)
395 3v8b_A Putative dehydrogenase, 25.2 87 0.003 28.7 5.2 78 38-124 28-113 (283)
396 2jah_A Clavulanic acid dehydro 25.1 1.2E+02 0.004 27.0 5.9 78 38-124 7-92 (247)
397 3v2h_A D-beta-hydroxybutyrate 24.9 1.7E+02 0.0058 26.7 7.1 79 38-124 25-112 (281)
398 3if4_A Integron cassette prote 24.8 48 0.0016 28.4 3.0 43 148-190 17-95 (119)
399 3gaf_A 7-alpha-hydroxysteroid 24.7 1E+02 0.0035 27.6 5.5 76 38-124 12-97 (256)
400 3ioy_A Short-chain dehydrogena 24.5 85 0.0029 29.4 5.1 78 38-124 8-95 (319)
401 2ew8_A (S)-1-phenylethanol deh 24.5 1E+02 0.0035 27.4 5.4 76 38-124 7-90 (249)
402 1qam_A ERMC' methyltransferase 24.5 1.6E+02 0.0054 26.6 6.7 77 36-127 29-105 (244)
403 2gdz_A NAD+-dependent 15-hydro 24.4 2.8E+02 0.0095 24.6 8.3 77 38-123 7-93 (267)
404 2rhc_B Actinorhodin polyketide 24.3 95 0.0032 28.2 5.2 78 38-124 22-107 (277)
405 2wyu_A Enoyl-[acyl carrier pro 23.9 1.3E+02 0.0044 26.9 6.0 75 38-124 8-94 (261)
406 3icc_A Putative 3-oxoacyl-(acy 23.8 1.9E+02 0.0064 25.3 6.9 79 38-124 7-99 (255)
407 3r1i_A Short-chain type dehydr 23.8 80 0.0027 28.9 4.6 78 38-124 32-117 (276)
408 1oaa_A Sepiapterin reductase; 23.7 3.2E+02 0.011 24.1 8.5 77 38-123 6-99 (259)
409 3ll7_A Putative methyltransfer 23.6 75 0.0026 32.1 4.8 82 37-129 93-176 (410)
410 4dmm_A 3-oxoacyl-[acyl-carrier 23.5 1.2E+02 0.0042 27.5 5.8 79 38-124 28-114 (269)
411 3ctm_A Carbonyl reductase; alc 23.4 65 0.0022 28.9 3.9 76 38-124 34-119 (279)
412 3uzu_A Ribosomal RNA small sub 23.3 2.5E+02 0.0087 26.3 8.1 82 36-127 41-125 (279)
413 3v97_A Ribosomal RNA large sub 23.2 7E+02 0.024 26.5 12.4 107 64-196 258-367 (703)
414 3h8l_A NADH oxidase; membrane 23.1 83 0.0029 30.0 4.8 43 86-128 224-270 (409)
415 3oid_A Enoyl-[acyl-carrier-pro 22.7 1.2E+02 0.0042 27.2 5.6 80 37-124 3-90 (258)
416 3ic5_A Putative saccharopine d 22.6 2.1E+02 0.0071 21.5 6.2 73 38-126 5-79 (118)
417 3sc4_A Short chain dehydrogena 22.6 4.1E+02 0.014 24.1 9.2 83 38-124 9-101 (285)
418 2q5c_A NTRC family transcripti 22.4 73 0.0025 28.5 4.0 53 39-100 95-148 (196)
419 3mtq_A Putative phosphoenolpyr 22.3 57 0.002 28.8 3.2 45 35-81 17-68 (159)
420 1xg5_A ARPG836; short chain de 22.3 1.3E+02 0.0045 27.0 5.7 79 37-124 31-119 (279)
421 3afn_B Carbonyl reductase; alp 22.1 1.2E+02 0.0041 26.4 5.2 79 38-124 7-93 (258)
422 2qq5_A DHRS1, dehydrogenase/re 22.0 1E+02 0.0034 27.5 4.8 78 38-124 5-91 (260)
423 2zat_A Dehydrogenase/reductase 22.0 93 0.0032 27.7 4.6 78 38-124 14-99 (260)
424 3evf_A RNA-directed RNA polyme 21.9 1.7E+02 0.0057 28.5 6.6 111 34-169 71-186 (277)
425 1rjw_A ADH-HT, alcohol dehydro 21.8 1.5E+02 0.0051 27.8 6.2 96 35-165 162-259 (339)
426 3pi7_A NADH oxidoreductase; gr 21.7 90 0.0031 29.4 4.6 93 39-166 166-262 (349)
427 4iiu_A 3-oxoacyl-[acyl-carrier 21.5 99 0.0034 27.7 4.7 79 38-124 26-112 (267)
428 4g81_D Putative hexonate dehyd 21.5 1E+02 0.0035 28.7 4.9 78 38-124 9-94 (255)
429 2hq1_A Glucose/ribitol dehydro 21.5 1.2E+02 0.0042 26.3 5.2 78 38-124 5-91 (247)
430 3osu_A 3-oxoacyl-[acyl-carrier 21.5 1.4E+02 0.0049 26.3 5.7 79 38-124 4-90 (246)
431 3abi_A Putative uncharacterize 21.3 3.7E+02 0.013 25.6 8.9 125 38-205 16-140 (365)
432 1vj0_A Alcohol dehydrogenase, 21.2 59 0.002 31.3 3.3 99 35-166 193-297 (380)
433 1zk4_A R-specific alcohol dehy 21.2 80 0.0027 27.6 3.9 78 38-124 6-90 (251)
434 1geg_A Acetoin reductase; SDR 20.9 1.3E+02 0.0044 26.8 5.3 77 39-124 3-87 (256)
435 3iup_A Putative NADPH:quinone 20.9 60 0.0021 31.3 3.3 73 36-122 169-246 (379)
436 3t7c_A Carveol dehydrogenase; 20.9 1.8E+02 0.0062 26.7 6.4 80 37-124 27-125 (299)
437 3pk0_A Short-chain dehydrogena 20.7 1.3E+02 0.0044 27.1 5.3 77 38-123 10-95 (262)
438 3e9n_A Putative short-chain de 20.7 2.5E+02 0.0086 24.6 7.1 74 38-124 5-83 (245)
439 3rih_A Short chain dehydrogena 20.7 1.1E+02 0.0037 28.4 4.9 78 37-123 40-126 (293)
440 2bd0_A Sepiapterin reductase; 20.6 1.3E+02 0.0043 26.2 5.1 77 38-123 2-93 (244)
441 3tsc_A Putative oxidoreductase 20.6 1.5E+02 0.0051 26.7 5.7 80 37-124 10-109 (277)
442 3sx2_A Putative 3-ketoacyl-(ac 20.6 1.5E+02 0.005 26.7 5.7 79 38-124 13-110 (278)
443 1qgu_B Protein (nitrogenase mo 20.5 80 0.0027 32.6 4.3 67 34-108 356-428 (519)
444 4imr_A 3-oxoacyl-(acyl-carrier 20.3 1.3E+02 0.0044 27.5 5.2 78 38-124 33-117 (275)
445 1lss_A TRK system potassium up 20.2 1.9E+02 0.0064 22.5 5.6 73 38-125 4-78 (140)
446 3s55_A Putative short-chain de 20.1 1.6E+02 0.0053 26.6 5.7 79 38-124 10-107 (281)
447 1xkq_A Short-chain reductase f 20.0 1.1E+02 0.0038 27.6 4.8 78 38-124 6-94 (280)
No 1
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.80 E-value=0.00018 Score=62.35 Aligned_cols=156 Identities=10% Similarity=0.056 Sum_probs=95.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++.++...+++|.-.+ ++..+ .++.|++...-..-.-+...|+.++... ...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~ 92 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQ--DKAIA---NTTKKLTDLNLIDRVTLIKDGHQNMDKY---IDC 92 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSC--HHHHH---HHHHHHHHTTCGGGEEEECSCGGGGGGT---CCS
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCCeEEEECCHHHHhhh---ccC
Confidence 456799999999999999999988644567765544 33332 3555554432111134556687776532 237
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccH---HHHHH---hCCcEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHI---EELAR---KHSLLR 189 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI---~~LAa---~aGL~L 189 (421)
.||.|++|+|....... .+..+......+++.+..+|+++|.+.+....+.+...... ....+ ..++.+
T Consensus 93 ~fD~v~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v 167 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDH-----SISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIV 167 (197)
T ss_dssp CEEEEEEEESBCTTSCT-----TCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEE
T ss_pred CceEEEEcCCcccCccc-----ccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEE
Confidence 89999999977432111 11123334456999999999999999999877654332222 22222 235666
Q ss_pred EEEeeCCCCCCCCCc
Q 014642 190 LDCVQFRKEDYPGYS 204 (421)
Q Consensus 190 ~~~~~F~~~~YPGY~ 204 (421)
.....+....-|+|-
T Consensus 168 ~~~~~~~~~~~pp~~ 182 (197)
T 3eey_A 168 QRTDFINQANCPPIL 182 (197)
T ss_dssp EEEEETTCCSCCCEE
T ss_pred EEEEeccCccCCCeE
Confidence 666555554555443
No 2
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.72 E-value=0.00038 Score=66.94 Aligned_cols=146 Identities=18% Similarity=0.205 Sum_probs=100.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++..+....|+|.-.+. . .. ..+..|++.+.-.++.+ ..-|++++.. ...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~-~-~l---~~a~~~~~~~g~~~v~~-~~~D~~~~~~----~~~ 186 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDE-N-RL---RETRLNLSRLGVLNVIL-FHSSSLHIGE----LNV 186 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCH-H-HH---HHHHHHHHHHTCCSEEE-ESSCGGGGGG----GCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCH-H-HH---HHHHHHHHHhCCCeEEE-EECChhhccc----ccc
Confidence 4577999999999999999998875455777765542 2 22 23566766553334444 4558887653 235
Q ss_pred cccEEEEcCCCCCCCC--C-c-----ccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHhCC
Q 014642 116 KFDRIIFNFPHAGFHG--K-E-----EDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARKHS 186 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~G--k-E-----d~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~aG 186 (421)
.||+|+.|-|..|..- + . .....+.....+-..++..+..+|+|+|.+.++-|+-.|- +.-.|..+.++.+
T Consensus 187 ~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 187 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 7999999999877421 1 1 1223445556667899999999999999999988876654 4455667777888
Q ss_pred cEEEE
Q 014642 187 LLRLD 191 (421)
Q Consensus 187 L~L~~ 191 (421)
+.++.
T Consensus 267 ~~~~~ 271 (315)
T 1ixk_A 267 VELLP 271 (315)
T ss_dssp EEEEC
T ss_pred CEEec
Confidence 77663
No 3
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.58 E-value=0.0005 Score=58.17 Aligned_cols=129 Identities=19% Similarity=0.162 Sum_probs=90.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++. +.+++++-.+ .++.+ .+..++ .++.++ ..|+.++. +...
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~--~~~~~---~a~~~~-----~~~~~~-~~d~~~~~----~~~~ 106 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLD--PILID---YAKQDF-----PEARWV-VGDLSVDQ----ISET 106 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHC-----TTSEEE-ECCTTTSC----CCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCC--HHHHH---HHHHhC-----CCCcEE-EcccccCC----CCCC
Confidence 45779999999999999999986 3467776554 22222 122222 135443 44777653 3357
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
.||.|+.+.+-.... ...-+..++..+..+|+++|.+.++......+..-.+.++.+++|+.+.+..
T Consensus 107 ~~D~i~~~~~~~~~~-----------~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFL-----------AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp CEEEEEECCCCGGGS-----------CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred ceeEEEECCcHHhhc-----------ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeee
Confidence 899999985544321 1122467888999999999999999888776777788889999999988774
No 4
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.55 E-value=0.00075 Score=59.81 Aligned_cols=148 Identities=14% Similarity=0.162 Sum_probs=94.1
Q ss_pred ceeeeccCC-CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcC
Q 014642 29 EKWIMHYSS-KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMK 107 (421)
Q Consensus 29 ~K~i~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~ 107 (421)
..|...|.. +.+||=||=|.=.|+..||+.+. ..+++|.-.+ .+ ..+ .+..|+....-.++.+ ..-|+..+.
T Consensus 32 ~~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s-~~-~l~---~a~~~~~~~~~~~v~~-~~~d~~~~~ 104 (214)
T 1yzh_A 32 AKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQ-KS-VLS---YALDKVLEVGVPNIKL-LWVDGSDLT 104 (214)
T ss_dssp TTHHHHHTSCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESC-HH-HHH---HHHHHHHHHCCSSEEE-EECCSSCGG
T ss_pred cCHHHHcCCCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcC-HH-HHH---HHHHHHHHcCCCCEEE-EeCCHHHHH
Confidence 356655654 67999999999999999998874 4577776554 22 222 3555655443223444 455887764
Q ss_pred cccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCc
Q 014642 108 EHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSL 187 (421)
Q Consensus 108 ~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL 187 (421)
.. +....||.|+.|||..-.+.+. ...+.....|+..+..+|+++|.+++.... .++.. .+.++.+++|+
T Consensus 105 ~~--~~~~~~D~i~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~-~~~~~~~~~g~ 174 (214)
T 1yzh_A 105 DY--FEDGEIDRLYLNFSDPWPKKRH------EKRRLTYKTFLDTFKRILPENGEIHFKTDN-RGLFE-YSLVSFSQYGM 174 (214)
T ss_dssp GT--SCTTCCSEEEEESCCCCCSGGG------GGGSTTSHHHHHHHHHHSCTTCEEEEEESC-HHHHH-HHHHHHHHHTC
T ss_pred hh--cCCCCCCEEEEECCCCccccch------hhhccCCHHHHHHHHHHcCCCcEEEEEeCC-HHHHH-HHHHHHHHCCC
Confidence 32 3356799999999965321100 011223567899999999999999997532 22333 34455566789
Q ss_pred EEEEEe
Q 014642 188 LRLDCV 193 (421)
Q Consensus 188 ~L~~~~ 193 (421)
.+....
T Consensus 175 ~~~~~~ 180 (214)
T 1yzh_A 175 KLNGVW 180 (214)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 887664
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.52 E-value=0.001 Score=58.23 Aligned_cols=139 Identities=16% Similarity=0.236 Sum_probs=93.9
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++..+....+++.-.+ ++..+ .+..++....-.++. +...|+.++. +..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~-~~~~d~~~~~----~~~ 104 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQ--EEMVN---YAWEKVNKLGLKNVE-VLKSEENKIP----LPD 104 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESC--HHHHH---HHHHHHHHHTCTTEE-EEECBTTBCS----SCS
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCcEE-EEecccccCC----CCC
Confidence 3557799999999999999999987545566665443 22222 244444433222343 4455777654 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----------CcCcccHHHHHHh
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----------PFCKWHIEELARK 184 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------PY~sWnI~~LAa~ 184 (421)
..||.|+.+...-.. ++ ...+++.+..+|+|+|.+.|+-.... .++...+..+.++
T Consensus 105 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL---SE-----------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp SCEEEEEEESCGGGC---SS-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred CCeeEEEeehhhhhc---CC-----------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 789999998764332 11 25788889999999999988754321 1345678889999
Q ss_pred CCcEEEEEeeCCC
Q 014642 185 HSLLRLDCVQFRK 197 (421)
Q Consensus 185 aGL~L~~~~~F~~ 197 (421)
+||..++...+..
T Consensus 171 ~Gf~~~~~~~~~~ 183 (219)
T 3dh0_A 171 AGIRVGRVVEVGK 183 (219)
T ss_dssp TTCEEEEEEEETT
T ss_pred CCCEEEEEEeeCC
Confidence 9999999877653
No 6
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.46 E-value=0.0011 Score=58.73 Aligned_cols=143 Identities=17% Similarity=0.137 Sum_probs=90.3
Q ss_pred CCCCeEEEEecC-ChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEG-DFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEG-DFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++.+||=+|=| .=.++..|++.. +.+++|+-.+. + ..+ .++.|++...- .+.++ .-|+..+.. +..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~-~-~~~---~a~~~~~~~~~-~v~~~-~~d~~~~~~---~~~ 121 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDE-E-FFE---YARRNIERNNS-NVRLV-KSNGGIIKG---VVE 121 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCH-H-HHH---HHHHHHHHTTC-CCEEE-ECSSCSSTT---TCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCH-H-HHH---HHHHHHHHhCC-CcEEE-eCCchhhhh---ccc
Confidence 467899999999 999999999886 45777776653 2 222 35556544322 35443 456654433 234
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHH------HhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIR------MHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLL 188 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~------~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~ 188 (421)
..||.|+.|.|...... ++...... ....++..|++.+..+|+|+|.+.+.+..+. ...-.+.++.++.|+.
T Consensus 122 ~~fD~I~~npp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~~~l~~~g~~ 199 (230)
T 3evz_A 122 GTFDVIFSAPPYYDKPL-GRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-KLLNVIKERGIKLGYS 199 (230)
T ss_dssp SCEEEEEECCCCC----------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-HHHHHHHHHHHHTTCE
T ss_pred CceeEEEECCCCcCCcc-ccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-hHHHHHHHHHHHcCCc
Confidence 78999999998765311 10000000 1224458899999999999999999765542 2334567788899997
Q ss_pred EEEE
Q 014642 189 RLDC 192 (421)
Q Consensus 189 L~~~ 192 (421)
+...
T Consensus 200 ~~~~ 203 (230)
T 3evz_A 200 VKDI 203 (230)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6654
No 7
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.45 E-value=0.00079 Score=57.73 Aligned_cols=120 Identities=10% Similarity=0.054 Sum_probs=75.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++. +.+|+|.-.+ +++.+ .++.|++...-..+.++. -|+..+... ...
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s--~~~l~---~a~~~~~~~~~~~v~~~~-~~~~~l~~~---~~~ 88 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQ--EQALG---KTSQRLSDLGIENTELIL-DGHENLDHY---VRE 88 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESC--HHHHH---HHHHHHHHHTCCCEEEEE-SCGGGGGGT---CCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECC--HHHHH---HHHHHHHHcCCCcEEEEe-CcHHHHHhh---ccC
Confidence 45789999999999999999987 3467665443 33333 356666654333456665 566665433 257
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
.||.|++|+|+... +. ..+..+......+++.+..+|+|+|.+.|....+.+
T Consensus 89 ~fD~v~~~~~~~~~-~~----~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 140 (185)
T 3mti_A 89 PIRAAIFNLGYLPS-AD----KSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHD 140 (185)
T ss_dssp CEEEEEEEEC----------------CHHHHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred CcCEEEEeCCCCCC-cc----hhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 89999999876652 11 123334445567889999999999999999887654
No 8
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.40 E-value=0.0011 Score=60.84 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=93.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=+|=|.=.+++.|++... .+|+|.-.+. +..+ .++.|+....-.+-.-+...|+.++... +....
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~--~~~~---~a~~n~~~~~~~~~v~~~~~D~~~~~~~--~~~~~ 119 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQE--RLAD---MAKRSVAYNQLEDQIEIIEYDLKKITDL--IPKER 119 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSH--HHHH---HHHHHHHHTTCTTTEEEECSCGGGGGGT--SCTTC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCH--HHHH---HHHHHHHHCCCcccEEEEECcHHHhhhh--hccCC
Confidence 678999999999999999998742 3677666553 2222 3666665433222234556688876542 34578
Q ss_pred ccEEEEcCCCCCC--CCCc--ccHHHHHHh--HHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEE
Q 014642 117 FDRIIFNFPHAGF--HGKE--EDDEVIRMH--MSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRL 190 (421)
Q Consensus 117 FDrIIFNFPH~G~--~GkE--d~~~~I~~n--r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~ 190 (421)
||.||.|-|.... .+.. +..+.+..| ...+..|++.|..+|+++|.+.+.+. +...-.+..++++.|+...
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR---PERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC---TTTHHHHHHHHHHTTEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc---HHHHHHHHHHHHHCCCceE
Confidence 9999999996542 1111 111122222 24467899999999999999999653 3344567778888999988
Q ss_pred EEeeCC
Q 014642 191 DCVQFR 196 (421)
Q Consensus 191 ~~~~F~ 196 (421)
+..+..
T Consensus 197 ~~~~v~ 202 (259)
T 3lpm_A 197 RIQFVH 202 (259)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 776543
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.39 E-value=0.0021 Score=58.59 Aligned_cols=145 Identities=13% Similarity=0.074 Sum_probs=96.4
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
...+..+||=||=|.=.++..|++. ...+++++-.+. + ..+ .++.+++...-.+-.-+...|+.++. +.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~-~-~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~ 111 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLS-G-FID---IFNRNARQSGLQNRVTGIVGSMDDLP----FR 111 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCH-H-HHH---HHHHHHHHTTCTTTEEEEECCTTSCC----CC
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCH-H-HHH---HHHHHHHHcCCCcCcEEEEcChhhCC----CC
Confidence 3456789999999999999999987 244677765542 2 222 24344333211121334556777654 34
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC---CCC----cCcc----------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT---TAP----FCKW---------- 176 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~P----Y~sW---------- 176 (421)
...||.|+.+.+.--. + ...+++.+..+|+|+|.+.|+-.. ..+ ...|
T Consensus 112 ~~~fD~i~~~~~~~~~-~--------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI-G--------------FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTI 176 (267)
T ss_dssp TTCEEEEEESSCGGGT-C--------------HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEH
T ss_pred CCCEEEEEEcCCceec-C--------------HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCH
Confidence 5789999998764321 1 246889999999999998887532 211 1234
Q ss_pred -cHHHHHHhCCcEEEEEeeCCCCCC-CCCc
Q 014642 177 -HIEELARKHSLLRLDCVQFRKEDY-PGYS 204 (421)
Q Consensus 177 -nI~~LAa~aGL~L~~~~~F~~~~Y-PGY~ 204 (421)
.+.++.+++||.+++...+....| ..|.
T Consensus 177 ~~~~~~l~~aGf~~v~~~~~~~~~w~~~~~ 206 (267)
T 3kkz_A 177 PNQVAKIHKAGYLPVATFILPENCWTDHYF 206 (267)
T ss_dssp HHHHHHHHHTTEEEEEEEECCGGGTTTTTH
T ss_pred HHHHHHHHHCCCEEEEEEECCHhHHHHHHH
Confidence 577888999999999998887666 5554
No 10
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.37 E-value=0.001 Score=59.23 Aligned_cols=135 Identities=17% Similarity=0.114 Sum_probs=86.0
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..++.+||=+|=|.=.++..|++.++....+++. |...+..+ .+..|++.+ .++.++ ..|+.+......+ .
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~---~~~~~~~~~--~~v~~~-~~d~~~~~~~~~~-~ 141 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGI--EFSPRVLR---ELVPIVEER--RNIVPI-LGDATKPEEYRAL-V 141 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEE--ESCHHHHH---HHHHHHSSC--TTEEEE-ECCTTCGGGGTTT-C
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEE--ECCHHHHH---HHHHHHhcc--CCCEEE-EccCCCcchhhcc-c
Confidence 3467899999999999999999988654567665 43232222 233343322 355544 4577764321122 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC-----Cc---CcccHHHHHHhCC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-----PF---CKWHIEELARKHS 186 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-----PY---~sWnI~~LAa~aG 186 (421)
..||.|+.|.|+.. ....++..+..+|+|+|.+.++..... |. ....+.++ .++
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~- 203 (227)
T 1g8a_A 142 PKVDVIFEDVAQPT----------------QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY- 203 (227)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-
T ss_pred CCceEEEECCCCHh----------------HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-
Confidence 47999999988221 123567889999999999999864321 11 12356666 556
Q ss_pred cEEEEEeeCC
Q 014642 187 LLRLDCVQFR 196 (421)
Q Consensus 187 L~L~~~~~F~ 196 (421)
|.+++...+.
T Consensus 204 f~~~~~~~~~ 213 (227)
T 1g8a_A 204 FEVIERLNLE 213 (227)
T ss_dssp SEEEEEEECT
T ss_pred ceeeeEeccC
Confidence 9888887654
No 11
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.34 E-value=0.00099 Score=59.83 Aligned_cols=148 Identities=14% Similarity=0.248 Sum_probs=93.8
Q ss_pred cceeeeccCC-CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCc
Q 014642 28 EEKWIMHYSS-KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEM 106 (421)
Q Consensus 28 ~~K~i~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL 106 (421)
...|...|.. ..+||=||=|.=.++..||+.+. ..+++|.-.+ .+..+ .+..|++...-.++.++ ..|+.++
T Consensus 28 ~~~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s--~~~l~---~a~~~~~~~~~~nv~~~-~~d~~~l 100 (213)
T 2fca_A 28 KGKWNTVFGNDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELF--KSVIV---TAVQKVKDSEAQNVKLL-NIDADTL 100 (213)
T ss_dssp TTCHHHHHTSCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSC--HHHHH---HHHHHHHHSCCSSEEEE-CCCGGGH
T ss_pred CCCHHHHcCCCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEec--hHHHH---HHHHHHHHcCCCCEEEE-eCCHHHH
Confidence 4467666764 56899999999999999998863 5678776554 22222 24555544322234444 4588876
Q ss_pred CcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCC
Q 014642 107 KEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHS 186 (421)
Q Consensus 107 ~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aG 186 (421)
... +....||.|+.|||..-.+... ...+.+...|++.+..+|+|+|.|++.... ..+..|-++.+. ++|
T Consensus 101 ~~~--~~~~~~d~v~~~~~~p~~~~~~------~~~rl~~~~~l~~~~~~LkpgG~l~~~td~-~~~~~~~~~~~~-~~g 170 (213)
T 2fca_A 101 TDV--FEPGEVKRVYLNFSDPWPKKRH------EKRRLTYSHFLKKYEEVMGKGGSIHFKTDN-RGLFEYSLKSFS-EYG 170 (213)
T ss_dssp HHH--CCTTSCCEEEEESCCCCCSGGG------GGGSTTSHHHHHHHHHHHTTSCEEEEEESC-HHHHHHHHHHHH-HHT
T ss_pred Hhh--cCcCCcCEEEEECCCCCcCccc------cccccCcHHHHHHHHHHcCCCCEEEEEeCC-HHHHHHHHHHHH-HCC
Confidence 432 3456799999999854321110 012222468899999999999999987633 234555555554 458
Q ss_pred cEEEEE
Q 014642 187 LLRLDC 192 (421)
Q Consensus 187 L~L~~~ 192 (421)
+.+...
T Consensus 171 ~~~~~~ 176 (213)
T 2fca_A 171 LLLTYV 176 (213)
T ss_dssp CEEEEE
T ss_pred Cccccc
Confidence 877654
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.31 E-value=0.0025 Score=57.12 Aligned_cols=141 Identities=12% Similarity=0.054 Sum_probs=93.0
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
...+..+||=||=|.=.++..|++..+ ..++++-.+ ....+ .+..++....-.+-.-+...|+.++. +.
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~ 111 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLF--PDFIE---IFNENAVKANCADRVKGITGSMDNLP----FQ 111 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCTTSCS----SC
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChhhCC----CC
Confidence 445678999999999999999999874 367666554 22222 23344332211121344566777664 34
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC---CCC----cCcc----------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT---TAP----FCKW---------- 176 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~P----Y~sW---------- 176 (421)
...||.|+.+....-. + ...+++.+..+|+|+|.+.|+-.. ..+ ...|
T Consensus 112 ~~~fD~v~~~~~l~~~-~--------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (257)
T 3f4k_A 112 NEELDLIWSEGAIYNI-G--------------FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVI 176 (257)
T ss_dssp TTCEEEEEEESCSCCC-C--------------HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBH
T ss_pred CCCEEEEEecChHhhc-C--------------HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCH
Confidence 5789999999543321 1 236888999999999999887532 111 1112
Q ss_pred -cHHHHHHhCCcEEEEEeeCCCCCC
Q 014642 177 -HIEELARKHSLLRLDCVQFRKEDY 200 (421)
Q Consensus 177 -nI~~LAa~aGL~L~~~~~F~~~~Y 200 (421)
.+.++.+++||..++...+....|
T Consensus 177 ~~~~~~l~~aGf~~v~~~~~~~~~w 201 (257)
T 3f4k_A 177 PTCIDKMERAGYTPTAHFILPENCW 201 (257)
T ss_dssp HHHHHHHHHTTEEEEEEEECCGGGT
T ss_pred HHHHHHHHHCCCeEEEEEECChhhH
Confidence 456788899999999988887766
No 13
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.30 E-value=0.00053 Score=56.53 Aligned_cols=117 Identities=16% Similarity=0.153 Sum_probs=80.0
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc----c
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH----S 110 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~----~ 110 (421)
..+..+||=||-|.=.++..|++.++....+++.-.+. +.+ . .++.+ ...|+.++... .
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~-~------------~~~~~-~~~d~~~~~~~~~~~~ 82 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDP-I------------VGVDF-LQGDFRDELVMKALLE 82 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCC-C------------TTEEE-EESCTTSHHHHHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---ccc-c------------CcEEE-EEcccccchhhhhhhc
Confidence 45677999999999999999999886556888887665 111 1 24444 34577765310 0
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
.+....||.|+.|.|.-.. +.. ......+..+...+++.+..+|+++|.+.++.....
T Consensus 83 ~~~~~~~D~i~~~~~~~~~-~~~--~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 83 RVGDSKVQVVMSDMAPNMS-GTP--AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHTTCCEEEEEECCCCCCC-SCH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred cCCCCceeEEEECCCcccc-CCC--ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 0345789999999985432 111 122334456678999999999999999999876653
No 14
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.24 E-value=0.0033 Score=61.54 Aligned_cols=131 Identities=16% Similarity=0.132 Sum_probs=83.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCC-cCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATE-MKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATk-L~~~~~Lk~~ 115 (421)
+..+||=|| |+=.++..|++.. ....+++.-.+ .+.+ + -+++|++.+.-..+.++.+ |+.+ |... ...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~-~~~l-~---~a~~~~~~~g~~~v~~~~~-D~~~~l~~~---~~~ 240 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDID-ERLT-K---FIEKAANEIGYEDIEIFTF-DLRKPLPDY---ALH 240 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSC-HHHH-H---HHHHHHHHHTCCCEEEECC-CTTSCCCTT---TSS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECC-HHHH-H---HHHHHHHHcCCCCEEEEEC-hhhhhchhh---ccC
Confidence 467999999 9999999998763 23455554443 3333 2 3666766543113555444 8877 5321 135
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeE-EEEecC--CCCcCcccHHHHHH-hCCcEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEV-HVSHKT--TAPFCKWHIEELAR-KHSLLRLD 191 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeI-HVTLk~--g~PY~sWnI~~LAa-~aGL~L~~ 191 (421)
.||.||.|-|.... . +..|+..|..+|+|+|.+ .++... +.+-..+.+.++.. +.|+.+..
T Consensus 241 ~fD~Vi~~~p~~~~--------------~-~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 241 KFDTFITDPPETLE--------------A-IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp CBSEEEECCCSSHH--------------H-HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred CccEEEECCCCchH--------------H-HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhh
Confidence 79999999884321 1 378999999999999954 555554 32211156667776 88887765
Q ss_pred Ee
Q 014642 192 CV 193 (421)
Q Consensus 192 ~~ 193 (421)
..
T Consensus 306 ~~ 307 (373)
T 2qm3_A 306 II 307 (373)
T ss_dssp EE
T ss_pred hh
Confidence 43
No 15
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.22 E-value=0.00075 Score=64.53 Aligned_cols=146 Identities=13% Similarity=0.238 Sum_probs=90.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeecccCCcCcccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK----KLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr----~~Gv~VlhgVDATkL~~~~~ 111 (421)
.+..+||.||=|+=.++..|++.. ....|++.-.|. ++.+ -+++++..+. ...+.++ .-|+.++...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~a~~~~~~~~~~~~~~~v~~~-~~D~~~~~~~-- 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDG--EVME---QSKQHFPQISRSLADPRATVR-VGDGLAFVRQ-- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEE-ESCHHHHHHS--
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEEE-ECcHHHHHHh--
Confidence 356799999999999999999864 345787777663 2222 2344444432 2235554 3476654221
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHH-HHHHHhhHhccCCCCeEEEEecCC--CCcCcccHHHHHHhCCcE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLV-EGFFRNASGMLRPRGEVHVSHKTT--APFCKWHIEELARKHSLL 188 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL-~~FF~SA~~lL~~~GeIHVTLk~g--~PY~sWnI~~LAa~aGL~ 188 (421)
....+||.||.|.|.... . ...|. ..||+.+..+|+|+|.+.+..... .+...+.+.+..++.||.
T Consensus 165 ~~~~~fDvIi~d~~~~~~--~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~ 233 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAG--P---------ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFA 233 (304)
T ss_dssp SCTTCEEEEEEECC--------------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCS
T ss_pred ccCCceeEEEECCCCccc--c---------chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCC
Confidence 124789999999876431 0 12222 689999999999999998875321 112346677778888988
Q ss_pred EEEEeeCCCCCCC
Q 014642 189 RLDCVQFRKEDYP 201 (421)
Q Consensus 189 L~~~~~F~~~~YP 201 (421)
.++........||
T Consensus 234 ~v~~~~~~vP~yp 246 (304)
T 3bwc_A 234 SVQYALMHVPTYP 246 (304)
T ss_dssp EEEEEECCCTTST
T ss_pred cEEEEEeeccccc
Confidence 7776555433343
No 16
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.22 E-value=0.00049 Score=64.38 Aligned_cols=149 Identities=17% Similarity=0.153 Sum_probs=93.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++..+....|+|.-.+. +.+ + .++.|++.+.-.++.+ ..-|++++.........
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~-~~l-~---~~~~~~~~~g~~~v~~-~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISK-TRT-K---ALKSNINRMGVLNTII-INADMRKYKDYLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCH-HHH-H---HHHHHHHHTTCCSEEE-EESCHHHHHHHHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCH-HHH-H---HHHHHHHHhCCCcEEE-EeCChHhcchhhhhccc
Confidence 4577999999998889999998765445787766542 222 2 3555655433223444 44587776432110246
Q ss_pred cccEEEEcCCCCCCCCC---c--ccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHH-HHhCCcE
Q 014642 116 KFDRIIFNFPHAGFHGK---E--EDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEEL-ARKHSLL 188 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~Gk---E--d~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~L-Aa~aGL~ 188 (421)
.||+|+.|-|..|. |. . .....+.....+...++..|..+|+|+|.+.++.++-.|- +...|..+ .+..++.
T Consensus 156 ~fD~Vl~d~Pcs~~-g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~ 234 (274)
T 3ajd_A 156 FFDKILLDAPCSGN-IIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVE 234 (274)
T ss_dssp CEEEEEEEECCC-------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEE
T ss_pred cCCEEEEcCCCCCC-cccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcE
Confidence 79999999999884 21 0 0111222233456789999999999999999999987665 44555553 4556777
Q ss_pred EEE
Q 014642 189 RLD 191 (421)
Q Consensus 189 L~~ 191 (421)
++.
T Consensus 235 ~~~ 237 (274)
T 3ajd_A 235 LII 237 (274)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 17
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.21 E-value=0.0017 Score=58.22 Aligned_cols=130 Identities=13% Similarity=0.161 Sum_probs=87.1
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-KKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-r~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..+..+||-+|=|.=.++..|++.++.+.++++.-.+ ++..+ .++.|++.. ....+. +...|+.++ .+.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~g~~~v~-~~~~d~~~~----~~~ 163 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEAR--PHHLA---QAERNVRAFWQVENVR-FHLGKLEEA----ELE 163 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHCCCCCEE-EEESCGGGC----CCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCEE-EEECchhhc----CCC
Confidence 3567899999999999999999987655677776554 22222 355555543 212233 344577665 133
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
...||.|+.|.|.. ..++..+..+|+++|.+.+...... ....+.+..++.|+...+..
T Consensus 164 ~~~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 164 EAAYDGVALDLMEP-------------------WKVLEKAALALKPDRFLVAYLPNIT--QVLELVRAAEAHPFRLERVL 222 (258)
T ss_dssp TTCEEEEEEESSCG-------------------GGGHHHHHHHEEEEEEEEEEESCHH--HHHHHHHHHTTTTEEEEEEE
T ss_pred CCCcCEEEECCcCH-------------------HHHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceEEEE
Confidence 46899999987643 2577888999999999998875431 23455556667888877665
Q ss_pred eC
Q 014642 194 QF 195 (421)
Q Consensus 194 ~F 195 (421)
..
T Consensus 223 ~~ 224 (258)
T 2pwy_A 223 EV 224 (258)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 18
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.19 E-value=0.0057 Score=56.95 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=89.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L 112 (421)
.++.+||=||=|.=.++..|++.++ .++++.-++ .+.+ + .++.++. ..|. .-+..-|+.++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~~~~-~---~a~~~~~---~~~~~~~v~~~~~d~~~~------ 134 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLS-ENQY-A---HDKAMFD---EVDSPRRKEVRIQGWEEF------ 134 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECC-HHHH-H---HHHHHHH---HSCCSSCEEEEECCGGGC------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECC-HHHH-H---HHHHHHH---hcCCCCceEEEECCHHHc------
Confidence 4677999999999999999999885 567776654 2222 2 2444433 3342 22344577665
Q ss_pred ccCcccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC------------------
Q 014642 113 SKRKFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP------------------ 172 (421)
Q Consensus 113 k~~~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------ 172 (421)
...||.|+.+.. |+... ++. ...+-+..+|+.+..+|+|+|.+.|.......
T Consensus 135 -~~~fD~v~~~~~~~~~~d~--~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADG--AGD-----AGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRF 206 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCC--SSC-----CCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHH
T ss_pred -CCCccEEEEcchHHhcCcc--ccc-----cchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccch
Confidence 478999999854 44211 000 00122468899999999999998887643211
Q ss_pred --------------cCcccHHHHHHhCCcEEEEEeeCCC
Q 014642 173 --------------FCKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 173 --------------Y~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
.+.-.+..+++++||.+++...+..
T Consensus 207 ~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 207 IKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp HHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 0111567788889999998877654
No 19
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.17 E-value=0.001 Score=58.30 Aligned_cols=135 Identities=12% Similarity=0.050 Sum_probs=90.7
Q ss_pred eeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 32 IMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 32 i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
+....+..+||=||=|.=.++..|++. +.++++.-.+ .++.+ .+..++ ++.+. ..|+.++.
T Consensus 38 ~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~------~~~~~-~~d~~~~~---- 98 (211)
T 3e23_A 38 LGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGS--PELAA---EASRRL------GRPVR-TMLFHQLD---- 98 (211)
T ss_dssp HTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHH------TSCCE-ECCGGGCC----
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCC--HHHHH---HHHHhc------CCceE-EeeeccCC----
Confidence 344556789999999999999999986 3366665443 22222 133332 44433 45666664
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC------------cCcccHH
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP------------FCKWHIE 179 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------Y~sWnI~ 179 (421)
....||.|+.++...-. ...-+..+++.+..+|+|+|.+.|+...+.+ ++.-.+.
T Consensus 99 -~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHV------------PRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLR 165 (211)
T ss_dssp -CCSCEEEEEECSCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHH
T ss_pred -CCCcEEEEEecCchhhc------------CHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHH
Confidence 35789999998643221 1122467888999999999999999876542 2334677
Q ss_pred HHHHhCC-cEEEEEeeCCCC
Q 014642 180 ELARKHS-LLRLDCVQFRKE 198 (421)
Q Consensus 180 ~LAa~aG-L~L~~~~~F~~~ 198 (421)
.+.+++| |.+++.......
T Consensus 166 ~~l~~aG~f~~~~~~~~~~~ 185 (211)
T 3e23_A 166 ARYAEAGTWASVAVESSEGK 185 (211)
T ss_dssp HHHHHHCCCSEEEEEEEEEE
T ss_pred HHHHhCCCcEEEEEEeccCC
Confidence 8889999 999988765543
No 20
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.15 E-value=0.0028 Score=54.91 Aligned_cols=139 Identities=15% Similarity=0.143 Sum_probs=85.5
Q ss_pred eeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc
Q 014642 31 WIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS 110 (421)
Q Consensus 31 ~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~ 110 (421)
++....++ +||=||=|.=.++..|++. +.++++.-.+ ++..+ .+..++.... .++. +...|+.++.
T Consensus 24 ~~~~~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~-~~~~d~~~~~--- 89 (202)
T 2kw5_A 24 VANQIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQS--SVGLA---KAKQLAQEKG-VKIT-TVQSNLADFD--- 89 (202)
T ss_dssp HHHHSCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSS--HHHHH---HHHHHHHHHT-CCEE-EECCBTTTBS---
T ss_pred HHHhCCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECC--HHHHH---HHHHHHHhcC-CceE-EEEcChhhcC---
Confidence 34445566 9999999999999999876 3366666544 22222 2333433221 1333 3345777653
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC--------CC---cCcccHH
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT--------AP---FCKWHIE 179 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--------~P---Y~sWnI~ 179 (421)
+....||.|+.++.|.. ..-...+++.+..+|+|+|.+.++.... .| ...+...
T Consensus 90 -~~~~~fD~v~~~~~~~~--------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (202)
T 2kw5_A 90 -IVADAWEGIVSIFCHLP--------------SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLE 154 (202)
T ss_dssp -CCTTTCSEEEEECCCCC--------------HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHH
T ss_pred -CCcCCccEEEEEhhcCC--------------HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHH
Confidence 34578999999988763 1124578888999999999999886432 12 2233333
Q ss_pred HHHHhC-CcEEEEEeeCCCC
Q 014642 180 ELARKH-SLLRLDCVQFRKE 198 (421)
Q Consensus 180 ~LAa~a-GL~L~~~~~F~~~ 198 (421)
++.+.. ||.++....+...
T Consensus 155 ~l~~~l~Gf~v~~~~~~~~~ 174 (202)
T 2kw5_A 155 TLQSELPSLNWLIANNLERN 174 (202)
T ss_dssp HHHHHCSSSCEEEEEEEEEE
T ss_pred HHHHHhcCceEEEEEEEEee
Confidence 332221 8887777665543
No 21
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.15 E-value=0.0018 Score=65.34 Aligned_cols=149 Identities=12% Similarity=0.104 Sum_probs=96.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
-.++.+||=+|=|.=.++..|++..+....|+|.-.+. ... ..+..|++.+.-.++. +...|++++... +..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~--~~l---~~~~~~~~~~g~~~v~-~~~~D~~~~~~~--~~~ 328 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDK--MRM---KRLKDFVKRMGIKIVK-PLVKDARKAPEI--IGE 328 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH--HHH---HHHHHHHHHTTCCSEE-EECSCTTCCSSS--SCS
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCH--HHH---HHHHHHHHHcCCCcEE-EEEcChhhcchh--hcc
Confidence 34577999999999999999998875435787765552 222 2355565543222333 445688877532 334
Q ss_pred CcccEEEEcCCCCCCCC--C-cc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc-cHHHH-HHh
Q 014642 115 RKFDRIIFNFPHAGFHG--K-EE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW-HIEEL-ARK 184 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~G--k-Ed-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW-nI~~L-Aa~ 184 (421)
..||+|+.|-|..|..- + .+ ....+.....+-..++..+..+|+|||.+.++-|+-.|...- .|..+ .+.
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 67999999999988411 1 11 011233344455788999999999999999998887766444 44554 444
Q ss_pred CCcEEEE
Q 014642 185 HSLLRLD 191 (421)
Q Consensus 185 aGL~L~~ 191 (421)
.++.+..
T Consensus 409 ~~~~~~~ 415 (450)
T 2yxl_A 409 PEFKLVP 415 (450)
T ss_dssp SSCEECC
T ss_pred CCCEEee
Confidence 4777654
No 22
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.15 E-value=0.0011 Score=61.51 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=89.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++.+|++.++ ..+++|+-.+ +...+ -++.|++.+.-..+.++ .-|+.+. +...
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s--~~~l~---~a~~n~~~~~~~~v~~~-~~d~~~~-----~~~~ 175 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRM--PDAVS---LAQRNAQHLAIKNIHIL-QSDWFSA-----LAGQ 175 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSS--HHHHH---HHHHHHHHHTCCSEEEE-CCSTTGG-----GTTC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEEE-Ecchhhh-----cccC
Confidence 4567999999999999999998774 4577776554 22222 35667665532234443 3466542 2246
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHh------------HHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHH
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMH------------MSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELAR 183 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~n------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa 183 (421)
.||.||.|.|..+.. .......+..| -..+..++..+..+|+++|.+.+.+.. ...-.+.++.+
T Consensus 176 ~fD~Iv~npPy~~~~-~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~l~ 251 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQ-DPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---QQGEAVRQAFI 251 (276)
T ss_dssp CEEEEEECCCCBCTT-CHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS---SCHHHHHHHHH
T ss_pred CccEEEECCCCCCcc-ccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc---hHHHHHHHHHH
Confidence 799999999988741 11000001111 145678999999999999999987532 34456777888
Q ss_pred hCCcEEEE
Q 014642 184 KHSLLRLD 191 (421)
Q Consensus 184 ~aGL~L~~ 191 (421)
++|+..++
T Consensus 252 ~~Gf~~v~ 259 (276)
T 2b3t_A 252 LAGYHDVE 259 (276)
T ss_dssp HTTCTTCC
T ss_pred HCCCcEEE
Confidence 88886443
No 23
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.14 E-value=0.0031 Score=59.47 Aligned_cols=139 Identities=15% Similarity=0.082 Sum_probs=95.4
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
+..++++||=+|=|.=.|+..||+..|..-.|+|--+. ++..+ .+.++ .++.+-.+..-.|+........ .
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s--~~~~~---~l~~~---a~~~~ni~~V~~d~~~p~~~~~-~ 144 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFA--PRVMR---DLLTV---VRDRRNIFPILGDARFPEKYRH-L 144 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECC--HHHHH---HHHHH---STTCTTEEEEESCTTCGGGGTT-T
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCC--HHHHH---HHHHh---hHhhcCeeEEEEeccCcccccc-c
Confidence 45678999999999999999999998866678875443 33332 13222 2334433333457777665433 3
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC------Cc-CcccHHHHHHhCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA------PF-CKWHIEELARKHS 186 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------PY-~sWnI~~LAa~aG 186 (421)
...+|.|+-++||.+. ...++.+|..+|+|+|.+.|.++... |- ...+..+.-+++|
T Consensus 145 ~~~vDvVf~d~~~~~~----------------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~G 208 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQ----------------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGG 208 (233)
T ss_dssp CCCEEEEEECCCCTTH----------------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTT
T ss_pred cceEEEEEEeccCChh----------------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCC
Confidence 4679999999998862 13578899999999999999886542 11 1123444556789
Q ss_pred cEEEEEeeCCC
Q 014642 187 LLRLDCVQFRK 197 (421)
Q Consensus 187 L~L~~~~~F~~ 197 (421)
|.+.+...+++
T Consensus 209 F~l~e~i~L~p 219 (233)
T 4df3_A 209 LEIKDVVHLDP 219 (233)
T ss_dssp CCEEEEEECTT
T ss_pred CEEEEEEccCC
Confidence 99999988765
No 24
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.12 E-value=0.006 Score=55.99 Aligned_cols=129 Identities=17% Similarity=0.172 Sum_probs=84.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC----CEEEeecccCCcCcccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG----ASIIHGVDATEMKEHSE 111 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G----v~VlhgVDATkL~~~~~ 111 (421)
.++.+||=||=|.=.++..|++.++ .++++...+. +.+ + .+..+ +++.| +.+ ...|+.++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~-~~~-~---~a~~~---~~~~~~~~~~~~-~~~d~~~~~---- 127 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSK-NQA-N---HVQQL---VANSENLRSKRV-LLAGWEQFD---- 127 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCH-HHH-H---HHHHH---HHTCCCCSCEEE-EESCGGGCC----
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCH-HHH-H---HHHHH---HHhcCCCCCeEE-EECChhhCC----
Confidence 4567999999999999999998775 3676665542 222 2 13333 33333 333 344665542
Q ss_pred cccCcccEEEEcC--CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----------C-------
Q 014642 112 LSKRKFDRIIFNF--PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----------P------- 172 (421)
Q Consensus 112 Lk~~~FDrIIFNF--PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------P------- 172 (421)
..||.|+.+. -|++. ++ ...+|+.+..+|+|+|.+.|+..... |
T Consensus 128 ---~~fD~v~~~~~l~~~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (287)
T 1kpg_A 128 ---EPVDRIVSIGAFEHFGH---ER-----------YDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFAR 190 (287)
T ss_dssp ---CCCSEEEEESCGGGTCT---TT-----------HHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHH
T ss_pred ---CCeeEEEEeCchhhcCh---HH-----------HHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccc
Confidence 6799999884 45542 11 35788899999999999888653321 1
Q ss_pred ---------------cCcccHHHHHHhCCcEEEEEeeCC
Q 014642 173 ---------------FCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 173 ---------------Y~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
++.-.+..+.+++||.+++...+.
T Consensus 191 ~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 191 FLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp HHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred hhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 122356677888999998887654
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.07 E-value=0.0068 Score=53.66 Aligned_cols=131 Identities=16% Similarity=0.230 Sum_probs=87.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=||=|.=.++..|++. +.++++.-.+ ..+.+. +..+. ...++. +...|+.++. +...
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~~---~~~~~~-~~~~d~~~~~----~~~~ 115 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDIS--EVMIQK---GKERG---EGPDLS-FIKGDLSSLP----FENE 115 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHHH---HHTTT---CBTTEE-EEECBTTBCS----SCTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECC--HHHHHH---HHhhc---ccCCce-EEEcchhcCC----CCCC
Confidence 45779999999999999999987 3467666443 222221 11111 122343 4456777663 3467
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC-------------------CcCcc
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-------------------PFCKW 176 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------------PY~sW 176 (421)
.||.|+.+...--. .+ ...+++.+..+|+|+|.+.|+..... .++.+
T Consensus 116 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (242)
T 3l8d_A 116 QFEAIMAINSLEWT---EE-----------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPW 181 (242)
T ss_dssp CEEEEEEESCTTSS---SC-----------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHH
T ss_pred CccEEEEcChHhhc---cC-----------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHH
Confidence 89999987653322 11 13678889999999999999874321 13445
Q ss_pred cHHHHHHhCCcEEEEEeeCC
Q 014642 177 HIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 177 nI~~LAa~aGL~L~~~~~F~ 196 (421)
.+..+.+++||.+++...+.
T Consensus 182 ~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 182 EFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp HHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHcCCEEEEeeccc
Confidence 78999999999999987663
No 26
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.01 E-value=0.004 Score=56.00 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=86.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..++.+||=||=|.=.++..|++..+ ...++|.-.+. +.+ + .+..|.+.. .++.+ ..-|+........+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~-~~~-~---~a~~~~~~~--~~v~~-~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAP-RIM-R---ELLDACAER--ENIIP-ILGDANKPQEYANIV- 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCH-HHH-H---HHHHHTTTC--TTEEE-EECCTTCGGGGTTTS-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCH-HHH-H---HHHHHhhcC--CCeEE-EECCCCCcccccccC-
Confidence 34677999999999999999999876 45677765542 222 1 233343222 23333 345777633222233
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC-CCc-------CcccHHHHHHhCC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT-APF-------CKWHIEELARKHS 186 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY-------~sWnI~~LAa~aG 186 (421)
..||.|+.++|..+ ....+++.+..+|+|+|.+.|+++.. .+. ..-.+. +.+++|
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 142 EKVDVIYEDVAQPN----------------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGG 204 (230)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHT
T ss_pred ccEEEEEEecCChh----------------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCC
Confidence 67999996655433 13467888999999999999985431 111 113444 556789
Q ss_pred cEEEEEeeCCC
Q 014642 187 LLRLDCVQFRK 197 (421)
Q Consensus 187 L~L~~~~~F~~ 197 (421)
|.+.+..++++
T Consensus 205 f~~~~~~~~~~ 215 (230)
T 1fbn_A 205 FKIVDEVDIEP 215 (230)
T ss_dssp EEEEEEEECTT
T ss_pred CEEEEEEccCC
Confidence 99998877653
No 27
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.00 E-value=0.0023 Score=64.19 Aligned_cols=147 Identities=15% Similarity=0.058 Sum_probs=94.7
Q ss_pred cccceeeeccCC-CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccC
Q 014642 26 KEEEKWIMHYSS-KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDAT 104 (421)
Q Consensus 26 ~~~~K~i~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDAT 104 (421)
..+..++..+.. +.+||=+|=|.=.||+.+|+. | + .| |+.|..+...+ .++.|++.. .....+. .-|+.
T Consensus 202 r~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~-g-a-~V--~avDis~~al~---~a~~n~~~n-g~~~~~~-~~D~~ 271 (393)
T 4dmg_A 202 RENRRLFEAMVRPGERVLDVYSYVGGFALRAARK-G-A-YA--LAVDKDLEALG---VLDQAALRL-GLRVDIR-HGEAL 271 (393)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHT-T-C-EE--EEEESCHHHHH---HHHHHHHHH-TCCCEEE-ESCHH
T ss_pred HHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHc-C-C-eE--EEEECCHHHHH---HHHHHHHHh-CCCCcEE-EccHH
Confidence 334566777776 889999999999999999985 2 3 34 45564333333 366676543 2233444 55666
Q ss_pred CcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcC-cc--cHHHH
Q 014642 105 EMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFC-KW--HIEEL 181 (421)
Q Consensus 105 kL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~-sW--nI~~L 181 (421)
++-.. +... ||.||.|-|.... ++. .+..-......++..|..+|+|+|.+++..+...+.. .| .|.+.
T Consensus 272 ~~l~~--~~~~-fD~Ii~dpP~f~~-~~~----~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a 343 (393)
T 4dmg_A 272 PTLRG--LEGP-FHHVLLDPPTLVK-RPE----ELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRA 343 (393)
T ss_dssp HHHHT--CCCC-EEEEEECCCCCCS-SGG----GHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHH--hcCC-CCEEEECCCcCCC-CHH----HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 54222 1334 9999999997663 333 2444455667788999999999999998888876532 32 34456
Q ss_pred HHhCCcEEE
Q 014642 182 ARKHSLLRL 190 (421)
Q Consensus 182 Aa~aGL~L~ 190 (421)
+.++|..+.
T Consensus 344 ~~~~g~~~~ 352 (393)
T 4dmg_A 344 AADLGRRLR 352 (393)
T ss_dssp HHHHTCCEE
T ss_pred HHHhCCeEE
Confidence 666665443
No 28
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.99 E-value=0.0052 Score=53.26 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=85.2
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
...+||=||=|.=.++..|++. +.+++++-++ +.+ ++..++.+...+...|+.++.........+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR---GIEAVGVDGD--RTL----------VDAARAAGAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHH----------HHHHHHTCSSCEEECCHHHHHTTCSCCCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCC--HHH----------HHHHHHhcccccchhhHHhhcccccccCCC
Confidence 4579999999999999999987 3467665444 222 222233333334556777764443334567
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC------------------------
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP------------------------ 172 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------------ 172 (421)
||.|+.++... . ++ ...+++.+..+|+|+|.+.|+......
T Consensus 117 fD~v~~~~~l~-~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (227)
T 3e8s_A 117 YDLICANFALL-H---QD-----------IIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQP 181 (227)
T ss_dssp EEEEEEESCCC-S---SC-----------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCC
T ss_pred ccEEEECchhh-h---hh-----------HHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCccc
Confidence 99999998766 2 21 136788899999999999998643210
Q ss_pred -----cCcccHHHHHHhCCcEEEEEee
Q 014642 173 -----FCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 173 -----Y~sWnI~~LAa~aGL~L~~~~~ 194 (421)
++.-++..+.+++||.+++...
T Consensus 182 ~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 182 MPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp EEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 0122466788999999998765
No 29
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.98 E-value=0.0021 Score=61.97 Aligned_cols=127 Identities=14% Similarity=0.140 Sum_probs=84.9
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
....+.+||=+|=|-=.||+.+|+. | +..|+|.-.+.. . +..+++|++...=.+-...+.-||.++..
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~-g-~~~V~avD~np~-a----~~~~~~N~~~N~v~~~v~~~~~D~~~~~~----- 189 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVY-G-KAKVIAIEKDPY-T----FKFLVENIHLNKVEDRMSAYNMDNRDFPG----- 189 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHH-T-CCEEEEECCCHH-H----HHHHHHHHHHTTCTTTEEEECSCTTTCCC-----
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHh-c-CCeEEEEECCHH-H----HHHHHHHHHHcCCCCcEEEEeCcHHHhcc-----
Confidence 3456889998888888888888865 3 457887666532 1 23466777654333434567789887642
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC-CCcCccc---HHHHHHhCCcEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT-APFCKWH---IEELARKHSLLR 189 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY~sWn---I~~LAa~aGL~L 189 (421)
...||+||.|-|+... .|+..|..+|++||-||+-.... .-...|. ++++++..|+.+
T Consensus 190 ~~~~D~Vi~~~p~~~~------------------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 190 ENIADRILMGYVVRTH------------------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp CSCEEEEEECCCSSGG------------------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEECCCCcHH------------------HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 4679999999997641 47778889999999998853321 1123343 456788888765
Q ss_pred E
Q 014642 190 L 190 (421)
Q Consensus 190 ~ 190 (421)
.
T Consensus 252 ~ 252 (278)
T 3k6r_A 252 E 252 (278)
T ss_dssp E
T ss_pred E
Confidence 3
No 30
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.97 E-value=0.0018 Score=60.78 Aligned_cols=126 Identities=11% Similarity=0.042 Sum_probs=84.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.||+.||+... ..++|.-.+ .+..+ .++.|++...-.+..-+..-|+.++.. ..
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s--~~~~~---~a~~n~~~n~~~~~v~~~~~D~~~~~~-----~~ 191 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKD--PYTFK---FLVENIHLNKVEDRMSAYNMDNRDFPG-----EN 191 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCC--HHHHH---HHHHHHHHTTCTTTEEEECSCTTTCCC-----CS
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECC--HHHHH---HHHHHHHHcCCCceEEEEECCHHHhcc-----cC
Confidence 3478999999998899999998742 246555443 33332 355665532222223366678887654 57
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC--Cc--CcccHHHHHHhCCcEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA--PF--CKWHIEELARKHSLLRLD 191 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~--PY--~sWnI~~LAa~aGL~L~~ 191 (421)
.||.|+.|.|... ..|+..+..+|+|+|.+++..+... .. ..-.+.+.++++|+.+..
T Consensus 192 ~fD~Vi~~~p~~~------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 192 IADRILMGYVVRT------------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CEEEEEECCCSSG------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CccEEEECCchhH------------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 8999999998321 3577788889999999999776531 11 123567788899998776
No 31
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.91 E-value=0.019 Score=51.89 Aligned_cols=142 Identities=18% Similarity=0.177 Sum_probs=90.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.+..+||=||=|.=.++..|++.+ +.++++.-.+. +.+ + .+..++....-. .+. +...|+.++. +..
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~-~~~-~---~a~~~~~~~~~~~~~~-~~~~d~~~~~----~~~ 127 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISR-PQV-N---QANARATAAGLANRVT-FSYADAMDLP----FED 127 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCH-HHH-H---HHHHHHHHTTCTTTEE-EEECCTTSCC----SCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCH-HHH-H---HHHHHHHhcCCCcceE-EEECccccCC----CCC
Confidence 467899999999999999999876 35677765542 222 2 133333221111 233 3445777753 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC-CC---------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT-AP--------------------- 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~P--------------------- 172 (421)
..||.|+.+...--. .+ ...+|+.+..+|+|+|.+.|+-... .+
T Consensus 128 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (273)
T 3bus_A 128 ASFDAVWALESLHHM---PD-----------RGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSL 193 (273)
T ss_dssp TCEEEEEEESCTTTS---SC-----------HHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCC
T ss_pred CCccEEEEechhhhC---CC-----------HHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCC
Confidence 789999988653322 11 1478888999999999988875321 11
Q ss_pred cCcccHHHHHHhCCcEEEEEeeCCCCCCCCC
Q 014642 173 FCKWHIEELARKHSLLRLDCVQFRKEDYPGY 203 (421)
Q Consensus 173 Y~sWnI~~LAa~aGL~L~~~~~F~~~~YPGY 203 (421)
++.-.+..+.+++||.+++...+.....+.|
T Consensus 194 ~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~ 224 (273)
T 3bus_A 194 GGIDEYESDVRQAELVVTSTVDISAQARPSL 224 (273)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEECHHHHTTHH
T ss_pred CCHHHHHHHHHHcCCeEEEEEECcHhHHHHH
Confidence 1223566788899999998888764433333
No 32
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.90 E-value=0.0093 Score=51.63 Aligned_cols=130 Identities=13% Similarity=0.100 Sum_probs=88.0
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
..+||=||=|.=.++..|++. +.++++.-.+ .++.+ .+..+ ..++.+ ...|+.++. +....|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~---~a~~~-----~~~~~~-~~~d~~~~~----~~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPA--TRLVE---LARQT-----HPSVTF-HHGTITDLS----DSPKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCC--HHHHH---HHHHH-----CTTSEE-ECCCGGGGG----GSCCCE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCC--HHHHH---HHHHh-----CCCCeE-EeCcccccc----cCCCCe
Confidence 679999999999999999987 3367766443 22222 12222 114544 344776653 345789
Q ss_pred cEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC-------------cCcccHHHHHHh
Q 014642 118 DRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP-------------FCKWHIEELARK 184 (421)
Q Consensus 118 DrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-------------Y~sWnI~~LAa~ 184 (421)
|.|+.++..--. ..++ +..+++.+..+|+|+|.+.|+...... ++.-.+.++.++
T Consensus 104 D~v~~~~~l~~~-~~~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 171 (203)
T 3h2b_A 104 AGLLAWYSLIHM-GPGE-----------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALET 171 (203)
T ss_dssp EEEEEESSSTTC-CTTT-----------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHH
T ss_pred EEEEehhhHhcC-CHHH-----------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHH
Confidence 999997632221 1111 357888899999999999999876542 233467788899
Q ss_pred CCcEEEEEeeCCC
Q 014642 185 HSLLRLDCVQFRK 197 (421)
Q Consensus 185 aGL~L~~~~~F~~ 197 (421)
+||.+++...+..
T Consensus 172 ~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 172 AGFQVTSSHWDPR 184 (203)
T ss_dssp TTEEEEEEEECTT
T ss_pred CCCcEEEEEecCC
Confidence 9999999988775
No 33
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=96.89 E-value=0.006 Score=54.64 Aligned_cols=133 Identities=10% Similarity=0.109 Sum_probs=89.4
Q ss_pred eeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 32 IMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 32 i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
+....+..+||=||=|.=.++..|++. +.++++.-.+ .+.+ +..++. +.+ ...|+.++.. .
T Consensus 36 l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s-~~~~-----------~~a~~~-~~~-~~~d~~~~~~--~ 96 (240)
T 3dli_A 36 IPYFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDIN-EDMI-----------KFCEGK-FNV-VKSDAIEYLK--S 96 (240)
T ss_dssp GGGTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSC-HHHH-----------HHHHTT-SEE-ECSCHHHHHH--T
T ss_pred HhhhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECC-HHHH-----------HHHHhh-cce-eeccHHHHhh--h
Confidence 444566789999999999999999886 3367665443 2222 222222 433 3456655421 2
Q ss_pred cccCcccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----------------Cc
Q 014642 112 LSKRKFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----------------PF 173 (421)
Q Consensus 112 Lk~~~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------------PY 173 (421)
+....||.|+.+.- |+. ..-+..+|+.+..+|+|+|.+.|+..+.. ++
T Consensus 97 ~~~~~fD~i~~~~~l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLD--------------PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPV 162 (240)
T ss_dssp SCTTCBSEEEEESCGGGSC--------------GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCC
T ss_pred cCCCCeeEEEECCchhhCC--------------cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccC
Confidence 34588999998743 332 11145789999999999999999876532 23
Q ss_pred CcccHHHHHHhCCcEEEEEeeCCC
Q 014642 174 CKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 174 ~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
+...+..+.+++||.+++...|.+
T Consensus 163 ~~~~l~~~l~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 163 HPETLKFILEYLGFRDVKIEFFEE 186 (240)
T ss_dssp CHHHHHHHHHHHTCEEEEEEEECC
T ss_pred CHHHHHHHHHHCCCeEEEEEEecc
Confidence 445778899999999999988864
No 34
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.88 E-value=0.0016 Score=60.44 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=85.9
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-KKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-r~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..++.+||=+|=|.=.++..|++..+.+..+++.-.+ ++..+ .+++|++.. ....+.+ ...|+.+ .+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~g~~~v~~-~~~d~~~-----~~~ 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERD--EDNLK---KAMDNLSEFYDIGNVRT-SRSDIAD-----FIS 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSC--HHHHH---HHHHHHHTTSCCTTEEE-ECSCTTT-----CCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECC--HHHHH---HHHHHHHhcCCCCcEEE-EECchhc-----cCc
Confidence 3456799999999999999999886445567766554 22222 355555433 2112333 3447665 123
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
...||.|+.|.|+. ..+++.+..+|+|+|.+.+...... ...++.+..++.||...+..
T Consensus 177 ~~~fD~Vi~~~~~~-------------------~~~l~~~~~~LkpgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 177 DQMYDAVIADIPDP-------------------WNHVQKIASMMKPGSVATFYLPNFD--QSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp SCCEEEEEECCSCG-------------------GGSHHHHHHTEEEEEEEEEEESSHH--HHHHHHHHSGGGTEEEEEEE
T ss_pred CCCccEEEEcCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEEEE
Confidence 46899999977643 1678888999999999999875431 23455566677899888776
Q ss_pred eC
Q 014642 194 QF 195 (421)
Q Consensus 194 ~F 195 (421)
..
T Consensus 236 ~~ 237 (275)
T 1yb2_A 236 EL 237 (275)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 35
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.86 E-value=0.0033 Score=64.60 Aligned_cols=148 Identities=18% Similarity=0.159 Sum_probs=102.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|-=..|..||...+....|+|.-.+. +.+ ..+.+|++.+.-.++ .+..-|+.++... ...
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~-~rl----~~~~~n~~r~g~~nv-~v~~~Da~~l~~~---~~~ 174 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFP-KRA----KILSENIERWGVSNA-IVTNHAPAELVPH---FSG 174 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSH-HHH----HHHHHHHHHHTCSSE-EEECCCHHHHHHH---HTT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCH-HHH----HHHHHHHHHcCCCce-EEEeCCHHHhhhh---ccc
Confidence 4577999999999999999998876555788765542 222 236677766543233 4455688776532 146
Q ss_pred cccEEEEcCCCCCCCC--Ccc------cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHhCC
Q 014642 116 KFDRIIFNFPHAGFHG--KEE------DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARKHS 186 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~G--kEd------~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~aG 186 (421)
.||+|+.|=|..|..- +.. ....+.....+...++.+|..+|+|+|.+..+-|+-.|- +.-.|..+.++.+
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 8999999999988411 110 112344455667789999999999999999999988775 5567777888888
Q ss_pred cEEEEE
Q 014642 187 LLRLDC 192 (421)
Q Consensus 187 L~L~~~ 192 (421)
+.+...
T Consensus 255 ~~l~~~ 260 (456)
T 3m4x_A 255 VTIEEI 260 (456)
T ss_dssp EEEECC
T ss_pred CEEEec
Confidence 666544
No 36
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.86 E-value=0.0035 Score=57.91 Aligned_cols=128 Identities=18% Similarity=0.219 Sum_probs=83.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++.+||-+|=|.=.++.+|++.++.+.++++.-.+ ++..+ .++.|++.+.- ..+. +..-|+.+. +..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~-----~~~ 179 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKR--EEFAK---LAESNLTKWGLIERVT-IKVRDISEG-----FDE 179 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCC--HHHHH---HHHHHHHHTTCGGGEE-EECCCGGGC-----CSC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCCCEE-EEECCHHHc-----ccC
Confidence 456799999999999999999987655567665443 22222 35556544321 1233 344466554 334
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
..||.|+.|.|.. ..++..+..+|+++|.+.+...... ....+.+..++.|+...+...
T Consensus 180 ~~~D~V~~~~~~~-------------------~~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 180 KDVDALFLDVPDP-------------------WNYIDKCWEALKGGGRFATVCPTTN--QVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp CSEEEEEECCSCG-------------------GGTHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHSSEEEEEEEC
T ss_pred CccCEEEECCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCCHH--HHHHHHHHHHHCCCceeEEEE
Confidence 6799999987643 2567888899999999998875421 223455556678998777654
Q ss_pred C
Q 014642 195 F 195 (421)
Q Consensus 195 F 195 (421)
-
T Consensus 239 ~ 239 (277)
T 1o54_A 239 S 239 (277)
T ss_dssp C
T ss_pred E
Confidence 3
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.84 E-value=0.0065 Score=57.07 Aligned_cols=146 Identities=11% Similarity=0.091 Sum_probs=94.2
Q ss_pred eccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 33 MHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 33 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
....+..+||=||=|.=.++..|++.++ ..+++.-.+ ++..+ .++.|+....-.+-.-+..-|+.++. +
T Consensus 113 ~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~ 181 (312)
T 3vc1_A 113 GQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLS--AAQAD---FGNRRARELRIDDHVRSRVCNMLDTP----F 181 (312)
T ss_dssp CCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCTTSCC----C
T ss_pred ccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCC--HHHHH---HHHHHHHHcCCCCceEEEECChhcCC----C
Confidence 3355678999999999999999999873 466665443 22222 24445443321112334555777653 3
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC-CCc------------------
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT-APF------------------ 173 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY------------------ 173 (421)
....||.|+.+.-.--. . ...+|+.+..+|+|+|.+.|+-... ..+
T Consensus 182 ~~~~fD~V~~~~~l~~~------------~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV------------D---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNI 246 (312)
T ss_dssp CTTCEEEEEEESCGGGS------------C---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCC
T ss_pred CCCCEeEEEECCchhhC------------C---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCC
Confidence 45789999987542211 0 5678899999999999988765321 111
Q ss_pred -CcccHHHHHHhCCcEEEEEeeCCCCCCCCCc
Q 014642 174 -CKWHIEELARKHSLLRLDCVQFRKEDYPGYS 204 (421)
Q Consensus 174 -~sWnI~~LAa~aGL~L~~~~~F~~~~YPGY~ 204 (421)
+.-.+.++.+++||.+++...+.....|.+.
T Consensus 247 ~s~~~~~~~l~~aGf~~~~~~~~~~~~~~~w~ 278 (312)
T 3vc1_A 247 HSRREYLRAMADNRLVPHTIVDLTPDTLPYWE 278 (312)
T ss_dssp CBHHHHHHHHHTTTEEEEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEEEEeCCHHHHHHHH
Confidence 1224567888999999999988755444443
No 38
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.82 E-value=0.0033 Score=61.76 Aligned_cols=157 Identities=14% Similarity=0.108 Sum_probs=97.8
Q ss_pred ceeeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc
Q 014642 29 EKWIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE 108 (421)
Q Consensus 29 ~K~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~ 108 (421)
..++..+ .+.+||=+|=|.=.||+.||+. +..++|.-.+ .+..+ .++.|++...-.++ .++.-|+.++-.
T Consensus 202 ~~~~~~~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~n~~~n~~~~~-~~~~~d~~~~~~ 271 (382)
T 1wxx_A 202 RLYMERF-RGERALDVFSYAGGFALHLALG---FREVVAVDSS--AEALR---RAEENARLNGLGNV-RVLEANAFDLLR 271 (382)
T ss_dssp HHHGGGC-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESC--HHHHH---HHHHHHHHTTCTTE-EEEESCHHHHHH
T ss_pred HHHHHhc-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECC--HHHHH---HHHHHHHHcCCCCc-eEEECCHHHHHH
Confidence 4445555 6679999999999999999986 3456665444 22222 35666654322233 344557766432
Q ss_pred ccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-Ccc--cHHHHHHhC
Q 014642 109 HSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKW--HIEELARKH 185 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sW--nI~~LAa~a 185 (421)
...-...+||.||.|-|..+. +++ .+.........++..+..+|+|+|.+.++.+...+- +.| .+.+.+.+.
T Consensus 272 ~~~~~~~~fD~Ii~dpP~~~~-~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~ 346 (382)
T 1wxx_A 272 RLEKEGERFDLVVLDPPAFAK-GKK----DVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDA 346 (382)
T ss_dssp HHHHTTCCEEEEEECCCCSCC-STT----SHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred HHHhcCCCeeEEEECCCCCCC-Chh----HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 111124689999999998874 332 234455667788999999999999999998876542 222 233466677
Q ss_pred C--cEEEEEeeCCCCCCC
Q 014642 186 S--LLRLDCVQFRKEDYP 201 (421)
Q Consensus 186 G--L~L~~~~~F~~~~YP 201 (421)
| +.+++.. -.+.++|
T Consensus 347 g~~~~~i~~~-~~~~d~p 363 (382)
T 1wxx_A 347 HRLLRVVEKR-GQPFDHP 363 (382)
T ss_dssp TCCEEEEEEE-CCCTTSC
T ss_pred CCeEEEEEcC-CCCCCCC
Confidence 6 4444432 3444555
No 39
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.78 E-value=0.012 Score=51.30 Aligned_cols=106 Identities=20% Similarity=0.298 Sum_probs=71.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
....+||=||=|.=.++..|++... ++++.-.+ +++.+ .+..++.... .++.++ ..|+.++. +...
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~~~~ 102 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDIS--EDMIR---KAREYAKSRE-SNVEFI-VGDARKLS----FEDK 102 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESC--HHHHH---HHHHHHHHTT-CCCEEE-ECCTTSCC----SCTT
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECC--HHHHH---HHHHHHHhcC-CCceEE-ECchhcCC----CCCC
Confidence 3467999999999999999988742 67766554 33332 2444443322 345554 44777653 3457
Q ss_pred cccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 116 KFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.||.|+.|.| +... .-...+++.+..+|+|+|.+.|...+
T Consensus 103 ~~D~v~~~~~~~~~~~--------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEP--------------LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCH--------------HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCH--------------HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 8999999988 4321 11357889999999999999887654
No 40
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.77 E-value=0.006 Score=60.90 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=96.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++..+. ..|+|.-.+.. . ...+..|++.+.- .+. +...|++++... +...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~-~----l~~~~~~~~~~g~-~~~-~~~~D~~~~~~~--~~~~ 314 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQ-R----LSRVYDNLKRLGM-KAT-VKQGDGRYPSQW--CGEQ 314 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTT-T----HHHHHHHHHHTTC-CCE-EEECCTTCTHHH--HTTC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHH-H----HHHHHHHHHHcCC-CeE-EEeCchhhchhh--cccC
Confidence 45789999999999999999987643 57887766542 1 1234455544321 243 345688876432 3346
Q ss_pred cccEEEEcCCCCCCCC--C-cc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc-cHHH-HHHhC
Q 014642 116 KFDRIIFNFPHAGFHG--K-EE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW-HIEE-LARKH 185 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~G--k-Ed-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW-nI~~-LAa~a 185 (421)
.||+|+.|-|..|..- + .+ ....+.....+-..++.+|..+|+|||.+.++.|+-.|-..- .|.. +++..
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 8999999999988411 1 11 112344555667899999999999999999999887665444 3444 44555
Q ss_pred CcEEEE
Q 014642 186 SLLRLD 191 (421)
Q Consensus 186 GL~L~~ 191 (421)
++.+..
T Consensus 395 ~~~~~~ 400 (429)
T 1sqg_A 395 DAELCE 400 (429)
T ss_dssp TCEECS
T ss_pred CCEEeC
Confidence 777653
No 41
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.75 E-value=0.0096 Score=53.32 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=85.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
...+.+||=+|=|.=.++..|++.++....++|.-.. .+.+.. +.++.+.. .++.+ ...|+.+.... ....
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s-~~~i~~----~~~~a~~~--~~v~~-~~~d~~~~~~~-~~~~ 145 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS-HRSGRD----LINLAKKR--TNIIP-VIEDARHPHKY-RMLI 145 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC-HHHHHH----HHHHHHHC--TTEEE-ECSCTTCGGGG-GGGC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC-HHHHHH----HHHHhhcc--CCeEE-EEcccCChhhh-cccC
Confidence 3457799999999999999999988644567766443 222211 11222111 34443 45577764321 1234
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC-----C----cCcccHHHHHHhC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-----P----FCKWHIEELARKH 185 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-----P----Y~sWnI~~LAa~a 185 (421)
..||.|+.|.|... ....++..+..+|+|+|.+.|+..... + +..+ .++.+++
T Consensus 146 ~~~D~V~~~~~~~~----------------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~l~~~ 207 (233)
T 2ipx_A 146 AMVDVIFADVAQPD----------------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE--VKKMQQE 207 (233)
T ss_dssp CCEEEEEECCCCTT----------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH--HHTTGGG
T ss_pred CcEEEEEEcCCCcc----------------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH--HHHHHHC
Confidence 68999999988211 123566778899999999999876421 1 1222 3556788
Q ss_pred CcEEEEEeeCCC
Q 014642 186 SLLRLDCVQFRK 197 (421)
Q Consensus 186 GL~L~~~~~F~~ 197 (421)
||.+.+....++
T Consensus 208 Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 208 NMKPQEQLTLEP 219 (233)
T ss_dssp TEEEEEEEECTT
T ss_pred CCceEEEEecCC
Confidence 999998777653
No 42
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.74 E-value=0.012 Score=52.87 Aligned_cols=134 Identities=15% Similarity=0.179 Sum_probs=83.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++.. .++++.-.+ +.+.+ .+..++....-.++.+. ..|+.++. +..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~~-~~d~~~~~----~~~ 85 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDAT--KEMVE---VASSFAQEKGVENVRFQ-QGTAESLP----FPD 85 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESC--HHHHH---HHHHHHHHHTCCSEEEE-ECBTTBCC----SCT
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECC--HHHHH---HHHHHHHHcCCCCeEEE-ecccccCC----CCC
Confidence 3457799999999999999999874 256655443 33332 24444433321234443 44776653 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----------------------C
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----------------------P 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------------------P 172 (421)
..||.|+.++..--. .+ ...+++.+..+|+|+|.+.++-.... .
T Consensus 86 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (239)
T 1xxl_A 86 DSFDIITCRYAAHHF---SD-----------VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRE 151 (239)
T ss_dssp TCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCC
T ss_pred CcEEEEEECCchhhc---cC-----------HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCC
Confidence 789999998643222 11 24778889999999999988643221 1
Q ss_pred cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
++.-.+..+.+++||..+....+
T Consensus 152 ~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 152 SSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCcEEEEEee
Confidence 22224556667777777766554
No 43
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.74 E-value=0.013 Score=51.08 Aligned_cols=134 Identities=13% Similarity=0.131 Sum_probs=85.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-------EEEeecccCCcC
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA-------SIIHGVDATEMK 107 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv-------~VlhgVDATkL~ 107 (421)
..++.+||=||=|.=.++..|++. +.++++.-.+. .+.+ .++.+ ++..|. .-+...|+..+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~--~~~~---~a~~~---~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINS--EAIR---LAETA---ARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCH--HHHH---HHHHH---TTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCH--HHHH---HHHHH---HHhcCCccccCcceEEEEecccccC
Confidence 346789999999999999999987 34676665542 2222 12222 333443 234455666653
Q ss_pred cccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----------------
Q 014642 108 EHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA---------------- 171 (421)
Q Consensus 108 ~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~---------------- 171 (421)
+....||.|+.+....-.. +......+++.+..+|+|+|.+.++.....
T Consensus 97 ----~~~~~~D~v~~~~~l~~~~-----------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 161 (235)
T 3sm3_A 97 ----FHDSSFDFAVMQAFLTSVP-----------DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPI 161 (235)
T ss_dssp ----SCTTCEEEEEEESCGGGCC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHH
T ss_pred ----CCCCceeEEEEcchhhcCC-----------CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccc
Confidence 3457899999986544321 122234788889999999999988743211
Q ss_pred ----------------------CcCcccHHHHHHhCCcEEEEEee
Q 014642 172 ----------------------PFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 172 ----------------------PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.++.-.+.++.+++||.+++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 162 TKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp HCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 12334567788888888887754
No 44
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.72 E-value=0.011 Score=49.77 Aligned_cols=108 Identities=20% Similarity=0.284 Sum_probs=72.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~Lk 113 (421)
.+..+||=+|=|.=.++..|++. +.++++.-.+. +..+ .++.|+....-.+ +.+ ...|+.+. +.
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~--~~~~---~a~~~~~~~~~~~~~~~~-~~~d~~~~-----~~ 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE---VKSTTMADINR--RAIK---LAKENIKLNNLDNYDIRV-VHSDLYEN-----VK 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCH--HHHH---HHHHHHHHTTCTTSCEEE-EECSTTTT-----CT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCH--HHHH---HHHHHHHHcCCCccceEE-EECchhcc-----cc
Confidence 36779999999999999999887 45677776553 2222 2444544322112 333 34466553 22
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...||.|+.|.|.... ...+..+++.+..+|+++|.+.++....
T Consensus 117 ~~~~D~v~~~~~~~~~-------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRAG-------------KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTTC-------------HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cCCceEEEECCCcccc-------------hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 5689999999885431 2335678999999999999999988765
No 45
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.71 E-value=0.012 Score=54.22 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=87.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~L 112 (421)
...+..+||=||=|.=.++..|++.++ .++++.-.. .+ ..+ .+..++....- ..+.++ ..|+.++. +
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s-~~-~~~---~a~~~~~~~~~~~~~~~~-~~d~~~~~----~ 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIA-PV-QNK---RNEEYNNQAGLADNITVK-YGSFLEIP----C 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESC-HH-HHH---HHHHHHHHHTCTTTEEEE-ECCTTSCS----S
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCC-HH-HHH---HHHHHHHhcCCCcceEEE-EcCcccCC----C
Confidence 446678999999999999999999874 366665443 22 222 23334333221 124443 44777753 3
Q ss_pred ccCcccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC---CC---------------
Q 014642 113 SKRKFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT---AP--------------- 172 (421)
Q Consensus 113 k~~~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g---~P--------------- 172 (421)
....||.|+.++. |+.. ...+|+.+..+|+|+|.+.|+-... .+
T Consensus 147 ~~~~fD~v~~~~~l~~~~~----------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPD----------------KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHD 210 (297)
T ss_dssp CTTCEEEEEEESCGGGCSC----------------HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSS
T ss_pred CCCCEeEEEecchhhhcCC----------------HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCC
Confidence 4578999998854 3321 3578899999999999988875321 11
Q ss_pred -cCcccHHHHHHhCCcEEEEEeeCC
Q 014642 173 -FCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 173 -Y~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
.+.-.+.++.+++||.+++...+.
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCHHHHHHHHHHCCCeEEEEEECc
Confidence 012245678889999999887654
No 46
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.71 E-value=0.0015 Score=59.58 Aligned_cols=141 Identities=16% Similarity=0.281 Sum_probs=89.3
Q ss_pred eeeeccCC-----------CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh------
Q 014642 30 KWIMHYSS-----------KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK------ 92 (421)
Q Consensus 30 K~i~~Yss-----------~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~------ 92 (421)
.|...|.. +.+||=||=|.=.|++.||+... ..++++.-.+ +.+.+ .+.+|++.++.
T Consensus 31 ~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~~~ 104 (246)
T 2vdv_E 31 DWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIR--VQVTN---YVEDRIIALRNNTASKH 104 (246)
T ss_dssp CGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESC--HHHHH---HHHHHHHHHHHTC-CCS
T ss_pred CHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcC--HHHHH---HHHHHHHHHhhcccccc
Confidence 56666654 56899999999999999998863 3466665433 33332 35667766632
Q ss_pred --CCCEEEeecccCC-cCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 93 --LGASIIHGVDATE-MKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 93 --~Gv~VlhgVDATk-L~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.++. +...|+.+ |... +....+|.|+.+||-.-.+.+.. ..+.+...|+..+..+|++||.+.+....
T Consensus 105 ~~~nv~-~~~~D~~~~l~~~--~~~~~~d~v~~~~p~p~~k~~~~------~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 105 GFQNIN-VLRGNAMKFLPNF--FEKGQLSKMFFCFPDPHFKQRKH------KARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp TTTTEE-EEECCTTSCGGGT--SCTTCEEEEEEESCCCC------------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcEE-EEeccHHHHHHHh--ccccccCEEEEECCCcccccchh------HHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 1333 44568876 4432 34578999999999866432211 11222357888899999999999985533
Q ss_pred CCCcCcccHHHHHHhCC
Q 014642 170 TAPFCKWHIEELARKHS 186 (421)
Q Consensus 170 g~PY~sWnI~~LAa~aG 186 (421)
..|..|-.+.+.....
T Consensus 176 -~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 176 -KDLHEWMVKHLEEHPL 191 (246)
T ss_dssp -HHHHHHHHHHHHHSTT
T ss_pred -HHHHHHHHHHHHhCcC
Confidence 3466777666655443
No 47
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.68 E-value=0.0052 Score=54.89 Aligned_cols=137 Identities=12% Similarity=0.171 Sum_probs=87.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++.+ +.++++.-.+. +..+ .+..++... ..+ -+...|+.++. +..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~--~~~~---~a~~~~~~~--~~~-~~~~~d~~~~~----~~~ 118 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICS--NIVN---MANERVSGN--NKI-IFEANDILTKE----FPE 118 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCH--HHHH---HHHHTCCSC--TTE-EEEECCTTTCC----CCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCH--HHHH---HHHHHhhcC--CCe-EEEECccccCC----CCC
Confidence 3456799999999999999999987 34666665532 2221 122221111 123 33455777763 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC-------------------cCc
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP-------------------FCK 175 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-------------------Y~s 175 (421)
..||.|+.+...--. ...-...+++.+..+|+|+|.+.|+.....+ ++.
T Consensus 119 ~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (266)
T 3ujc_A 119 NNFDLIYSRDAILAL------------SLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITV 186 (266)
T ss_dssp TCEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCH
T ss_pred CcEEEEeHHHHHHhc------------ChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCH
Confidence 789999998532221 0122457888999999999998887643221 223
Q ss_pred ccHHHHHHhCCcEEEEEeeCCC
Q 014642 176 WHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 176 WnI~~LAa~aGL~L~~~~~F~~ 197 (421)
-.+..+.+++||..++...+..
T Consensus 187 ~~~~~~l~~~Gf~~~~~~~~~~ 208 (266)
T 3ujc_A 187 EEYADILTACNFKNVVSKDLSD 208 (266)
T ss_dssp HHHHHHHHHTTCEEEEEEECHH
T ss_pred HHHHHHHHHcCCeEEEEEeCCH
Confidence 3567788899999998877653
No 48
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.67 E-value=0.0055 Score=55.25 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=86.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=+|=|.=.++..|++..+.+..+++.-.+ ++..+ .++.|++...-.+-..+..-|+.+. +...
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~ 161 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIR--EDFAK---LAWENIKWAGFDDRVTIKLKDIYEG-----IEEE 161 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHTCTTTEEEECSCGGGC-----CCCC
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecC--HHHHH---HHHHHHHHcCCCCceEEEECchhhc-----cCCC
Confidence 457799999999999999999987656677776544 22322 3566665543223234455566643 3346
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCC--cEEEEEe
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHS--LLRLDCV 193 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aG--L~L~~~~ 193 (421)
.||.|+.|.|.. ..++..+..+|+++|.+.+...... ....+.+..++.| +...+..
T Consensus 162 ~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 162 NVDHVILDLPQP-------------------ERVVEHAAKALKPGGFFVAYTPCSN--QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp SEEEEEECSSCG-------------------GGGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHTGGGBSCCEEE
T ss_pred CcCEEEECCCCH-------------------HHHHHHHHHHcCCCCEEEEEECCHH--HHHHHHHHHHHcCCCccccEEE
Confidence 799999987733 2578888999999999988753321 2234556667777 7666665
Q ss_pred eCCC
Q 014642 194 QFRK 197 (421)
Q Consensus 194 ~F~~ 197 (421)
....
T Consensus 221 e~~~ 224 (255)
T 3mb5_A 221 NVLV 224 (255)
T ss_dssp CCCC
T ss_pred EEee
Confidence 5433
No 49
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.66 E-value=0.029 Score=48.64 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=85.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++. + .++++.-.+. ++ ++..++.... +...|+.++.. .+...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~--~~----------~~~~~~~~~~-~~~~d~~~~~~--~~~~~ 92 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFP--EA----------AEQAKEKLDH-VVLGDIETMDM--PYEEE 92 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSH--HH----------HHHHHTTSSE-EEESCTTTCCC--CSCTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCH--HH----------HHHHHHhCCc-EEEcchhhcCC--CCCCC
Confidence 46789999999999999999987 3 5666665442 22 2233333333 34457665422 23457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC------------------------
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA------------------------ 171 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------------------------ 171 (421)
.||.|+.+...--. .+ ...+++.+..+|+++|.+.++..+..
T Consensus 93 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T 3cc8_A 93 QFDCVIFGDVLEHL---FD-----------PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKT 158 (230)
T ss_dssp CEEEEEEESCGGGS---SC-----------HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTT
T ss_pred ccCEEEECChhhhc---CC-----------HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcc
Confidence 89999998643221 11 13788999999999999999864311
Q ss_pred ---CcCcccHHHHHHhCCcEEEEEeeCCC
Q 014642 172 ---PFCKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 172 ---PY~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
.++.-.+.++.+++||.+++...+..
T Consensus 159 ~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 159 HIRFFTFNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp CCCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred eEEEecHHHHHHHHHHcCCeEEEEEeccc
Confidence 12344677888999999888776553
No 50
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.66 E-value=0.011 Score=51.51 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=85.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++. + ..+++|.-.+ +...+ .++.|+....-.++.+ ..-|+.+. ...
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~------~~~ 124 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDIS--DESMT---AAEENAALNGIYDIAL-QKTSLLAD------VDG 124 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESC--HHHHH---HHHHHHHHTTCCCCEE-EESSTTTT------CCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEE-Eecccccc------CCC
Confidence 45679999999999999998874 3 3467666554 22222 2555554433223443 34566543 237
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.||.|+.|.|. ..+..+++.+..+|+++|.+.++.... .....+..+.+++|+.+.+...
T Consensus 125 ~fD~i~~~~~~-----------------~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 125 KFDLIVANILA-----------------EILLDLIPQLDSHLNEDGQVIFSGIDY--LQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp CEEEEEEESCH-----------------HHHHHHGGGSGGGEEEEEEEEEEEEEG--GGHHHHHHHHHHTTEEEEEEEE
T ss_pred CceEEEECCcH-----------------HHHHHHHHHHHHhcCCCCEEEEEecCc--ccHHHHHHHHHHcCCceEEeec
Confidence 89999999753 124688999999999999998864332 2455677888999999887654
No 51
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.62 E-value=0.0022 Score=55.16 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=75.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=+|=|.=.++..|++.. .+.++++.-.+.. ..+ .++.|+..... .+. +...|+.+.-........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~--~~~---~a~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMD--ALA---VARRNAERFGA-VVD-WAAADGIEWLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------------CCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHH--HHH---HHHHHHHHhCC-ceE-EEEcchHhhhhhhhhccC
Confidence 567799999999999999999885 3446776655432 221 23444443321 222 223344441000001137
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHH------------HhHHHHHHHHHhhHhccCCCCe-EEEEecCCCCcCcccHHHHH
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIR------------MHMSLVEGFFRNASGMLRPRGE-VHVSHKTTAPFCKWHIEELA 182 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~------------~nr~LL~~FF~SA~~lL~~~Ge-IHVTLk~g~PY~sWnI~~LA 182 (421)
.||.|+.|.|.............++ ....++..|++.+..+|+++|. +.+.+... ..-.+.++.
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~l 177 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QADEVARLF 177 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CHHHHHHHT
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cHHHHHHHH
Confidence 8999999999765321111001111 1123348899999999999999 77766432 223445555
Q ss_pred H--hCCcEEEE
Q 014642 183 R--KHSLLRLD 191 (421)
Q Consensus 183 a--~aGL~L~~ 191 (421)
+ +.|+..++
T Consensus 178 ~~~~~gf~~~~ 188 (215)
T 4dzr_A 178 APWRERGFRVR 188 (215)
T ss_dssp GGGGGGTEECC
T ss_pred HHhhcCCceEE
Confidence 6 66765443
No 52
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.61 E-value=0.0062 Score=62.76 Aligned_cols=147 Identities=17% Similarity=0.215 Sum_probs=100.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|-=..|..||+..+....|+|.-.+. +.+ ..+.+|++.+.-. +.++ .-|++++... ...
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~-~~l----~~a~~n~~r~G~~-v~~~-~~Da~~l~~~---~~~ 169 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDG-KRV----RGLLENVERWGAP-LAVT-QAPPRALAEA---FGT 169 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH-HHH----HHHHHHHHHHCCC-CEEE-CSCHHHHHHH---HCS
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCH-HHH----HHHHHHHHHcCCe-EEEE-ECCHHHhhhh---ccc
Confidence 3577999999999999999998876545677765442 222 2366677655332 4443 4587776432 246
Q ss_pred cccEEEEcCCCCCCCC--C-cc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHhC-
Q 014642 116 KFDRIIFNFPHAGFHG--K-EE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARKH- 185 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~G--k-Ed-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~a- 185 (421)
.||+|+.|=|..|..- + .+ ....+.....+-..++.+|..+|+|+|.+..+-|+-.|- +.-.|..+.++.
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC
Confidence 8999999999987410 1 11 123455556677889999999999999999998987665 556666666655
Q ss_pred CcEEEEE
Q 014642 186 SLLRLDC 192 (421)
Q Consensus 186 GL~L~~~ 192 (421)
++.+...
T Consensus 250 ~~~l~~~ 256 (464)
T 3m6w_A 250 EFRLEDA 256 (464)
T ss_dssp TEEEECC
T ss_pred CcEEEec
Confidence 6777654
No 53
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.61 E-value=0.01 Score=60.99 Aligned_cols=141 Identities=17% Similarity=0.144 Sum_probs=95.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
++.+||=+|=|-=++|..||+..+....|+|.-.+. +.+ ..+.+|++.+.-.++. +..-|++++... ....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~-~~l----~~~~~n~~r~g~~nv~-~~~~D~~~~~~~---~~~~ 187 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSA-SRV----KVLHANISRCGISNVA-LTHFDGRVFGAA---VPEM 187 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSH-HHH----HHHHHHHHHHTCCSEE-EECCCSTTHHHH---STTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH-HHH----HHHHHHHHHcCCCcEE-EEeCCHHHhhhh---cccc
Confidence 678999999999999999998876555788765552 222 2366677665433344 445688876432 2367
Q ss_pred ccEEEEcCCCCCCCC--C-cc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHhCC
Q 014642 117 FDRIIFNFPHAGFHG--K-EE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARKHS 186 (421)
Q Consensus 117 FDrIIFNFPH~G~~G--k-Ed-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~aG 186 (421)
||+|+.|=|..|..- + .+ ....+.....+-..++.+|..+|+|+|.+.++-|+-.|. +.-.|..+.++.+
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 999999999987411 1 11 123455555667789999999999999999998887664 3445556555443
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.60 E-value=0.01 Score=52.18 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=67.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++. +.++++.-.+ ..+.+ .+..++.... .++.++ ..|+.++. +. ..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s--~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~~-~~ 101 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLS--QEMLS---EAENKFRSQG-LKPRLA-CQDISNLN----IN-RK 101 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSC--HHHHH---HHHHHHHHTT-CCCEEE-CCCGGGCC----CS-CC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECC--HHHHH---HHHHHHhhcC-CCeEEE-ecccccCC----cc-CC
Confidence 4679999999999999999886 2356655443 23322 1333332211 135443 44776653 22 67
Q ss_pred ccEEEEcC---CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 117 FDRIIFNF---PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 117 FDrIIFNF---PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
||.|+.++ +|+.. ..-+..+++.+..+|+|+|.+.++..
T Consensus 102 fD~v~~~~~~l~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 102 FDLITCCLDSTNYIID-------------SDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp EEEEEECTTGGGGCCS-------------HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ceEEEEcCccccccCC-------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 99999976 55531 12245788999999999999988653
No 55
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.57 E-value=0.0058 Score=57.26 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=89.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L 112 (421)
.+..+||=||=|.=.++..||.....+.++++.-.+ +...+ .+..|+ +..|. .-+..-|+.++. +
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~----~ 184 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYD--PEALD---GATRLA---AGHALAGQITLHRQDAWKLD----T 184 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESC--HHHHH---HHHHHH---TTSTTGGGEEEEECCGGGCC----C
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECC--HHHHH---HHHHHH---HhcCCCCceEEEECchhcCC----c
Confidence 557899999999999999997443345567665543 22222 233333 33443 345566887764 2
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC--------------------
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP-------------------- 172 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-------------------- 172 (421)
. ..||.|+.|.+..-... ..-...|++.+..+|+|+|.+.|+.....|
T Consensus 185 ~-~~fD~v~~~~~~~~~~~-----------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~ 252 (305)
T 3ocj_A 185 R-EGYDLLTSNGLNIYEPD-----------DARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQL 252 (305)
T ss_dssp C-SCEEEEECCSSGGGCCC-----------HHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHH
T ss_pred c-CCeEEEEECChhhhcCC-----------HHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhh
Confidence 3 78999999876554311 222456888999999999999998744321
Q ss_pred ----------------cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 ----------------FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 ----------------Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
++.-.+.++.+++||..++....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 253 QQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECC
T ss_pred hhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcc
Confidence 12234667888999999988763
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.56 E-value=0.01 Score=55.50 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=67.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L 112 (421)
.++.+||=||=|.=.++..|++.++ .++++.-.+ .+.+ + .+..+ +++.|. .-+...|+.++.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~~~~-~---~a~~~---~~~~~~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLS-KNQH-A---RCEQV---LASIDTNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC-HHHH-H---HHHHH---HHTSCCSSCEEEEESCGGGCC-----
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECC-HHHH-H---HHHHH---HHhcCCCCceEEEECChHHCC-----
Confidence 4577999999999999999998874 367666554 2222 2 13333 333342 223345776652
Q ss_pred ccCcccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 113 SKRKFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 113 k~~~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
..||.|+.+.. |++. + -...+++.+..+|+|+|.+.|+...
T Consensus 154 --~~fD~v~~~~~l~~~~~---~-----------~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGH---E-----------NYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp --CCCSEEEEESCGGGTCG---G-----------GHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred --CCcCEEEEeChHHhcCH---H-----------HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 67999998853 3431 1 1457888899999999998887644
No 57
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.54 E-value=0.0056 Score=53.69 Aligned_cols=134 Identities=15% Similarity=0.221 Sum_probs=86.6
Q ss_pred eeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc
Q 014642 31 WIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS 110 (421)
Q Consensus 31 ~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~ 110 (421)
.+.++.+..+||=||=|.=.++..|++.. .++++.-.+ +++.+ .+..++. . ++.++. .|+.++
T Consensus 36 ~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s--~~~~~---~a~~~~~---~-~v~~~~-~d~~~~---- 98 (250)
T 2p7i_A 36 AFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEAS--EEAIS---HAQGRLK---D-GITYIH-SRFEDA---- 98 (250)
T ss_dssp HHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESC--HHHHH---HHHHHSC---S-CEEEEE-SCGGGC----
T ss_pred HHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCC--HHHHH---HHHHhhh---C-CeEEEE-ccHHHc----
Confidence 34555677899999999999999998763 267665443 22221 1222211 1 454443 477766
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhH-hccCCCCeEEEEecCCC------------------
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNAS-GMLRPRGEVHVSHKTTA------------------ 171 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~-~lL~~~GeIHVTLk~g~------------------ 171 (421)
+....||.|+.++-.--. .+ ...+++.+. .+|+|+|.+.|+..+..
T Consensus 99 -~~~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 163 (250)
T 2p7i_A 99 -QLPRRYDNIVLTHVLEHI---DD-----------PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSA 163 (250)
T ss_dssp -CCSSCEEEEEEESCGGGC---SS-----------HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTC
T ss_pred -CcCCcccEEEEhhHHHhh---cC-----------HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchh
Confidence 235789999998631111 11 147888899 99999999999875432
Q ss_pred ------------CcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 172 ------------PFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 172 ------------PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
.++.-.+..+.+++||.+++...+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 164 VTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSGIF 200 (250)
T ss_dssp CCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccccccccccCCHHHHHHHHHHCCCeEEEEeeeE
Confidence 1233367788899999998886543
No 58
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.53 E-value=0.012 Score=53.21 Aligned_cols=131 Identities=17% Similarity=0.219 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA--SIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv--~VlhgVDATkL~~~~~Lk 113 (421)
.+..+||=||=|.=.++..|++..+ .+++ .|.-+++.+ .+..++ ++.|. .-+...|+.++. +.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~g--vD~s~~~l~---~a~~~~---~~~~~~~v~~~~~d~~~l~----~~ 100 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVA--FDLTEDILK---VARAFI---EGNGHQQVEYVQGDAEQMP----FT 100 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEE--EESCHHHHH---HHHHHH---HHTTCCSEEEEECCC-CCC----SC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEE--EeCCHHHHH---HHHHHH---HhcCCCceEEEEecHHhCC----CC
Confidence 4567999999999999999998752 5555 453233332 133333 33332 223345777653 34
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC--C--------------------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT--A-------------------- 171 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--~-------------------- 171 (421)
...||.|+.++-.--. .| ...+|+.+..+|+|+|.+.++-... .
T Consensus 101 ~~~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHF---PN-----------PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHR 166 (260)
T ss_dssp TTCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCC
T ss_pred CCCEEEEEEhhhhHhc---CC-----------HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccC
Confidence 5789999998643222 11 2378888999999999998863211 1
Q ss_pred CcCcccHHHHHHhCCcEEEEEeeC
Q 014642 172 PFCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 172 PY~sWnI~~LAa~aGL~L~~~~~F 195 (421)
.++.-.+.++.+++||.+.....+
T Consensus 167 ~~~~~~~~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 167 AWKKSDWLKMLEEAGFELEELHCF 190 (260)
T ss_dssp CCBHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEEEe
Confidence 112224556777788887766554
No 59
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.51 E-value=0.0084 Score=54.79 Aligned_cols=128 Identities=17% Similarity=0.164 Sum_probs=82.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-H--hCCCEEEeecccCCcCcccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-K--KLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-r--~~Gv~VlhgVDATkL~~~~~ 111 (421)
..+..+||-+|=|.=+++.+|++..+...++++.-.+ ++..+ .+..|++.. . ...+.+ ...|+.++.
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~g~~~~~v~~-~~~d~~~~~---- 166 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQR--ADHAE---HARRNVSGCYGQPPDNWRL-VVSDLADSE---- 166 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHHTSCCTTEEE-ECSCGGGCC----
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCCcEEE-EECchHhcC----
Confidence 3457799999999999999999987655677766554 22222 355666554 2 123444 345776652
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHH-HHHhCCcEEE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEE-LARKHSLLRL 190 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~-LAa~aGL~L~ 190 (421)
+....||.|+.|.|+.- .++..+..+|+++|.+.+...+.. ....+.. +.+..++...
T Consensus 167 ~~~~~~D~v~~~~~~~~-------------------~~l~~~~~~L~pgG~l~~~~~~~~--~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 167 LPDGSVDRAVLDMLAPW-------------------EVLDAVSRLLVAGGVLMVYVATVT--QLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp CCTTCEEEEEEESSCGG-------------------GGHHHHHHHEEEEEEEEEEESSHH--HHHHHHHHHHHHSSBCCC
T ss_pred CCCCceeEEEECCcCHH-------------------HHHHHHHHhCCCCCEEEEEeCCHH--HHHHHHHHHHhcCCcCCc
Confidence 33567999999887331 568888999999999999876532 1222333 4433666554
Q ss_pred EEe
Q 014642 191 DCV 193 (421)
Q Consensus 191 ~~~ 193 (421)
+..
T Consensus 226 ~~~ 228 (280)
T 1i9g_A 226 RAW 228 (280)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 60
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.51 E-value=0.0026 Score=63.36 Aligned_cols=137 Identities=19% Similarity=0.233 Sum_probs=89.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=+|=|.=.++..|++. +..|++.-.+ +...+ .++.|++... ..+.++ .-|+.++.. ....
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis--~~al~---~A~~n~~~~~-~~v~~~-~~D~~~~~~----~~~~ 298 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDD--LASVL---SLQKGLEANA-LKAQAL-HSDVDEALT----EEAR 298 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESB--HHHHH---HHHHHHHHTT-CCCEEE-ECSTTTTSC----TTCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcC-CCeEEE-Ecchhhccc----cCCC
Confidence 4568999999999999999886 2367765544 22222 2555654332 235444 357666532 2478
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc------cHHHHHHhCCcEEE
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW------HIEELARKHSLLRL 190 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW------nI~~LAa~aGL~L~ 190 (421)
||.||.|.|.... +.. ....+..|++.+..+|+++|.+.|......+|..| +++.+ +..||.+.
T Consensus 299 fD~Ii~npp~~~~-~~~--------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~v~~l-~~~gF~Vl 368 (381)
T 3dmg_A 299 FDIIVTNPPFHVG-GAV--------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTL-KVAEYKVL 368 (381)
T ss_dssp EEEEEECCCCCTT-CSS--------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSCCEEE-EESSSEEE
T ss_pred eEEEEECCchhhc-ccc--------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhccEEEE-eCCCEEEE
Confidence 9999999996642 111 12446789999999999999999988776666443 33344 66777777
Q ss_pred EEeeCCC
Q 014642 191 DCVQFRK 197 (421)
Q Consensus 191 ~~~~F~~ 197 (421)
+......
T Consensus 369 ~a~~~~~ 375 (381)
T 3dmg_A 369 FAEKRGR 375 (381)
T ss_dssp EEECC--
T ss_pred EEEEecc
Confidence 7655443
No 61
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.49 E-value=0.0034 Score=62.13 Aligned_cols=164 Identities=15% Similarity=0.087 Sum_probs=98.8
Q ss_pred cccccceeeecc-CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEee
Q 014642 24 DEKEEEKWIMHY-SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL--GASIIHG 100 (421)
Q Consensus 24 ~~~~~~K~i~~Y-ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~Vlhg 100 (421)
+...+++++..+ ..+.+||=+|=|.=.||+.||+. + +..|++.-.+.. ..+ .|+.|++...-. .+. +..
T Consensus 198 ~~~~~~~~~~~~~~~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~~--al~---~A~~N~~~n~~~~~~v~-~~~ 269 (385)
T 2b78_A 198 DQRQVRNELINGSAAGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAKR--SRA---LSLAHFEANHLDMANHQ-LVV 269 (385)
T ss_dssp GGHHHHHHHHHTTTBTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCTT--HHH---HHHHHHHHTTCCCTTEE-EEE
T ss_pred cHHHHHHHHHHHhcCCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCHH--HHH---HHHHHHHHcCCCccceE-EEE
Confidence 334455677666 77889999999998999999875 2 346766655432 222 356666543211 233 344
Q ss_pred cccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc--CcccH
Q 014642 101 VDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF--CKWHI 178 (421)
Q Consensus 101 VDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY--~sWnI 178 (421)
-||.+.-......+.+||.||.|-|-.+. ++.. +......+..++..|..+|+|+|.|.++.+..... ..|++
T Consensus 270 ~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~-~~~~----~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 344 (385)
T 2b78_A 270 MDVFDYFKYARRHHLTYDIIIIDPPSFAR-NKKE----VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQ 344 (385)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCCC------C----CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCccEEEECCCCCCC-Chhh----HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHH
Confidence 57765321111124589999999998752 1111 11123345567788999999999999998776431 22343
Q ss_pred H-HHHHhCCcEEEEEeeCCCCCCC
Q 014642 179 E-ELARKHSLLRLDCVQFRKEDYP 201 (421)
Q Consensus 179 ~-~LAa~aGL~L~~~~~F~~~~YP 201 (421)
. +.|+++|..+++ ..-.+.|+|
T Consensus 345 i~~~~~~~g~~~~~-~~~~~~D~p 367 (385)
T 2b78_A 345 IEKGFGKQKHTYLD-LQQLPSDFA 367 (385)
T ss_dssp HHHHHTTCCCEEEE-EECCCTTSC
T ss_pred HHHHHHHcCCcEEE-eCCCCCCCC
Confidence 3 467788888444 444566676
No 62
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.49 E-value=0.011 Score=54.87 Aligned_cols=134 Identities=10% Similarity=0.029 Sum_probs=89.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
....+||=||=|.=..++.||..++ +..|+ ..|..+...+ -++.|++.+.-.+++++++ |+.++.... ....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~--~vD~s~~~~~---~a~~~~~~~~l~~v~~~~~-d~~~~~~~~-~~~~ 150 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-ELELV--LVDATRKKVA---FVERAIEVLGLKGARALWG-RAEVLAREA-GHRE 150 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-TCEEE--EEESCHHHHH---HHHHHHHHHTCSSEEEEEC-CHHHHTTST-TTTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-CCEEE--EEECCHHHHH---HHHHHHHHhCCCceEEEEC-cHHHhhccc-ccCC
Confidence 4577999999999999999998763 34554 4564443333 4677887775445665554 777664321 1236
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHhCCcEEEEEee
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.||.|+.+- +. + +..++..+..+|+++|.+.+.... .+. ..-.+...++..|+.+.+..+
T Consensus 151 ~fD~I~s~a--~~-----~-----------~~~ll~~~~~~LkpgG~l~~~~g~-~~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 151 AYARAVARA--VA-----P-----------LCVLSELLLPFLEVGGAAVAMKGP-RVEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp CEEEEEEES--SC-----C-----------HHHHHHHHGGGEEEEEEEEEEECS-CCHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred CceEEEECC--cC-----C-----------HHHHHHHHHHHcCCCeEEEEEeCC-CcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 899999862 11 1 347888899999999998765432 122 223455667788999999988
Q ss_pred CC
Q 014642 195 FR 196 (421)
Q Consensus 195 F~ 196 (421)
|.
T Consensus 212 ~~ 213 (249)
T 3g89_A 212 LQ 213 (249)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 63
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.49 E-value=0.017 Score=52.54 Aligned_cols=136 Identities=15% Similarity=0.214 Sum_probs=88.4
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..++.+||=||=|+=.++..|++.. .+..++++-.+ ..+.+ .+..++....-.+ ..+...|+.++. +..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~-~~~~~~d~~~~~----~~~ 103 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDIS--PESLE---KARENTEKNGIKN-VKFLQANIFSLP----FED 103 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESC--HHHHH---HHHHHHHHTTCCS-EEEEECCGGGCC----SCT
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECC--HHHHH---HHHHHHHHcCCCC-cEEEEcccccCC----CCC
Confidence 4567899999999999999999885 34567666544 22222 2334433322112 334445777654 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC-------------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT------------------------- 169 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------------------- 169 (421)
..||.|+.++...-. .+ ...+++.+..+|+|+|.+.++..+
T Consensus 104 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHL---QS-----------PEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQA 169 (276)
T ss_dssp TCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEechhhhc---CC-----------HHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHH
Confidence 789999998754332 11 136788889999999999987532
Q ss_pred ---CCCcCcccHHHHHHhCCcEEEEEeeC
Q 014642 170 ---TAPFCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 170 ---g~PY~sWnI~~LAa~aGL~L~~~~~F 195 (421)
+.++..=.+..+.+++||..++...+
T Consensus 170 ~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 170 YMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred hcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 11222235677889999999888755
No 64
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.47 E-value=0.0073 Score=58.85 Aligned_cols=141 Identities=14% Similarity=0.085 Sum_probs=85.0
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCccccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~Lk~ 114 (421)
+..+||=+|=|.=.||+.|++. + + .|+| .|.-....+ .++.|++...-.+ +. +..-|+.++........
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-g-a-~V~~--VD~s~~al~---~a~~n~~~~gl~~~~v~-~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-G-A-EVTH--VDASKKAIG---WAKENQVLAGLEQAPIR-WICEDAMKFIQREERRG 223 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T-C-EEEE--ECSCHHHHH---HHHHHHHHHTCTTSCEE-EECSCHHHHHHHHHHHT
T ss_pred CCCcEEEcccccCHHHHHHHHc-C-C-EEEE--EECCHHHHH---HHHHHHHHcCCCccceE-EEECcHHHHHHHHHhcC
Confidence 4569999999999999999875 2 2 5554 554333333 3666766543222 43 34457766432111114
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc---c-HHHHHHhCCcEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW---H-IEELARKHSLLRL 190 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW---n-I~~LAa~aGL~L~ 190 (421)
.+||.||.|-|..+. ++... +......+..++..|..+|+++|.+.++.......+.- + |.+.++++|+.+.
T Consensus 224 ~~fD~Ii~dPP~~~~-~~~~~---~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 224 STYDIILTDPPKFGR-GTHGE---VWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCBSEEEECCCSEEE-CTTCC---EEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCceEEEECCccccC-CchHH---HHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 689999999997663 21110 11123446788899999999999977776544332221 2 2335557788775
No 65
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.44 E-value=0.0038 Score=57.49 Aligned_cols=137 Identities=15% Similarity=0.205 Sum_probs=87.7
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh---C---CCEEEeecccCC-cCccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK---L---GASIIHGVDATE-MKEHS 110 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~---~---Gv~VlhgVDATk-L~~~~ 110 (421)
..+||=||=|.=.|+..||+.+. ..++++.-.. +.+.+ .|..+++.|+. . ++.+ ...||.+ |...
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis--~~~l~---~A~~~~~~l~~~~~~~~~nv~~-~~~d~~~~l~~~- 118 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFP-DTLILGLEIR--VKVSD---YVQDRIRALRAAPAGGFQNIAC-LRSNAMKHLPNF- 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGST-TSEEEEEESC--HHHHH---HHHHHHHHHHHSTTCCCTTEEE-EECCTTTCHHHH-
T ss_pred CCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECC--HHHHH---HHHHHHHHHHHHHhcCCCeEEE-EECcHHHhhhhh-
Confidence 45799999999999999998863 4577766544 33333 36667777753 2 2333 4558776 4321
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEE
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRL 190 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~ 190 (421)
+....||.|+.|||-.-.+.+. .+.|.+...|++.+..+|++||.++++... ..|-.|-++.+.+..++...
T Consensus 119 -~~~~~~D~v~~~~~dp~~k~~h------~krr~~~~~~l~~~~~~LkpGG~l~~~td~-~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 119 -FYKGQLTKMFFLFPDPHFKRTK------HKWRIISPTLLAEYAYVLRVGGLVYTITDV-LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp -CCTTCEEEEEEESCC-----------------CCCHHHHHHHHHHEEEEEEEEEEESC-HHHHHHHHHHHHTSTTEEEE
T ss_pred -CCCcCeeEEEEeCCCchhhhhh------hhhhhhhHHHHHHHHHHCCCCCEEEEEeCC-HHHHHHHHHHHHHCCCcccc
Confidence 3457899999999854431110 112222357899999999999999998654 34777888887766555443
No 66
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.43 E-value=0.0041 Score=52.76 Aligned_cols=119 Identities=17% Similarity=0.180 Sum_probs=72.3
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~L 112 (421)
....+.+||=+|=|.=.++..+++. + ..++++.-.+. ++.+ .++.|++...- ..+. ++.-|+.++......
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 112 (187)
T 2fhp_A 41 PYFDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNF--AALK---VIKENIAITKEPEKFE-VRKMDANRALEQFYE 112 (187)
T ss_dssp SCCSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHHHHHTCGGGEE-EEESCHHHHHHHHHH
T ss_pred hhcCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHhCCCcceE-EEECcHHHHHHHHHh
Confidence 4456789999999998898888874 2 35777776652 2222 35556655431 1233 445577664221111
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF 173 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY 173 (421)
....||.|+.|.|..-. + ...++.... +..+|+++|.+.+........
T Consensus 113 ~~~~fD~i~~~~~~~~~----~-------~~~~~~~l~--~~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 113 EKLQFDLVLLDPPYAKQ----E-------IVSQLEKML--ERQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp TTCCEEEEEECCCGGGC----C-------HHHHHHHHH--HTTCEEEEEEEEEEEETTCCC
T ss_pred cCCCCCEEEECCCCCch----h-------HHHHHHHHH--HhcccCCCCEEEEEeCCcccc
Confidence 25689999999993311 0 112222221 477999999999998776543
No 67
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.41 E-value=0.015 Score=52.18 Aligned_cols=132 Identities=9% Similarity=0.079 Sum_probs=85.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++.. ..+++++-.+ +++.+ .++.++. ..++ -+...|+.++. +....
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s--~~~~~---~a~~~~~---~~~~-~~~~~d~~~~~----~~~~~ 108 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLS--ERMLT---EAKRKTT---SPVV-CYEQKAIEDIA----IEPDA 108 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESC--HHHHH---HHHHHCC---CTTE-EEEECCGGGCC----CCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECC--HHHHH---HHHHhhc---cCCe-EEEEcchhhCC----CCCCC
Confidence 56799999999999999999873 2366666543 22222 1222222 2233 34456776653 34578
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC---------------C--------c
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA---------------P--------F 173 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~---------------P--------Y 173 (421)
||.|+.+...-.. ++ +..+++.+..+|+|+|.+.|+..... + |
T Consensus 109 fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (253)
T 3g5l_A 109 YNVVLSSLALHYI---AS-----------FDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRY 174 (253)
T ss_dssp EEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCT
T ss_pred eEEEEEchhhhhh---hh-----------HHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccc
Confidence 9999998743221 11 35788889999999999999843210 0 0
Q ss_pred --------------------CcccHHHHHHhCCcEEEEEeeCCC
Q 014642 174 --------------------CKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 174 --------------------~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
+.-.+..+.+++||.+++.....+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 175 FNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp TCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred cccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCC
Confidence 223477889999999999876554
No 68
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.35 E-value=0.044 Score=47.31 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=69.9
Q ss_pred eeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCc
Q 014642 31 WIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKE 108 (421)
Q Consensus 31 ~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~ 108 (421)
++.......+||=||=|.=.++..|++. +.++++.-.+ .+.. +..++.| -.-+...|+.++
T Consensus 40 ~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s--~~~~----------~~a~~~~~~~~~~~~~d~~~~-- 102 (218)
T 3ou2_A 40 RLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGS--AEMI----------AEAGRHGLDNVEFRQQDLFDW-- 102 (218)
T ss_dssp HHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESC--HHHH----------HHHGGGCCTTEEEEECCTTSC--
T ss_pred HHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCC--HHHH----------HHHHhcCCCCeEEEecccccC--
Confidence 3445667789999999999999999987 3466665443 2222 2222233 123344577665
Q ss_pred ccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 109 HSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
+....||.|+.++-.--. ....+..+++.+..+|+|+|.+.++...
T Consensus 103 ---~~~~~~D~v~~~~~l~~~------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 103 ---TPDRQWDAVFFAHWLAHV------------PDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp ---CCSSCEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---CCCCceeEEEEechhhcC------------CHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 245789999998632211 1234567889999999999999888543
No 69
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.35 E-value=0.072 Score=48.20 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=85.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCH-----HHHHHhhhhHHHHHHHHHhCC----CEEEeecccCC
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSY-----ETVVKKFKEARSNLDTLKKLG----ASIIHGVDATE 105 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~-----eeL~~KY~~a~~Nl~~Lr~~G----v~VlhgVDATk 105 (421)
..++.+||=||=|.=.++..|++.+|...++++.-.+.. +.+. .+..++ +..| +.++. .| .-
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~----~a~~~~---~~~~~~~~v~~~~-~d-~~ 111 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLG----QAWNHL---LAGPLGDRLTVHF-NT-NL 111 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHH----HHHHHH---HTSTTGGGEEEEC-SC-CT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHH----HHHHHH---HhcCCCCceEEEE-CC-hh
Confidence 356789999999999999999998865467888777642 1111 133333 2332 44433 34 11
Q ss_pred cCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC--------------
Q 014642 106 MKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-------------- 171 (421)
Q Consensus 106 L~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------- 171 (421)
......+....||.|+.+.+.--. .+ . ..+++.+..+++++|.+.++-....
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~---~~--------~---~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 177 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYF---AS--------A---NALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAM 177 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGS---SC--------H---HHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHH
T ss_pred hhccCCCCCCCEEEEEEccchhhC---CC--------H---HHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHH
Confidence 111223345789999998774322 11 0 1356667778888999888642211
Q ss_pred ------------CcCcc------cHHHHHHhCCcEEEEEeeC
Q 014642 172 ------------PFCKW------HIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 172 ------------PY~sW------nI~~LAa~aGL~L~~~~~F 195 (421)
+...| .+..+.+++||.+++...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 178 IQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 11112 5677888999999998877
No 70
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.29 E-value=0.024 Score=51.58 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=88.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L 112 (421)
.++.+||=||=|.=.++..|++. + ..++++.-.+ .+ ..+ .+..++ ...|. ..+...|+.++...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s-~~-~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~~--- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIA-EV-SIN---DARVRA---RNMKRRFKVFFRAQDSYGRHMD--- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESC-HH-HHH---HHHHHH---HTSCCSSEEEEEESCTTTSCCC---
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECC-HH-HHH---HHHHHH---HhcCCCccEEEEECCccccccC---
Confidence 46789999999988888888875 2 3366666544 22 222 133333 33332 23345577776321
Q ss_pred ccCcccEEEEcCC-CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC---------------------
Q 014642 113 SKRKFDRIIFNFP-HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT--------------------- 170 (421)
Q Consensus 113 k~~~FDrIIFNFP-H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--------------------- 170 (421)
....||.|+.++. |... .+..-+..+++.+..+|+|+|.+.|+..+.
T Consensus 130 ~~~~fD~v~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAF-----------STSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIEL 198 (298)
T ss_dssp CSSCEEEEEEESCGGGGG-----------SSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEEC
T ss_pred CCCCcCEEEECchhhhhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEe
Confidence 3578999999864 2211 123335678999999999999999886441
Q ss_pred -----CC------cC----------------cccHHHHHHhCCcEEEEEeeCC
Q 014642 171 -----AP------FC----------------KWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 171 -----~P------Y~----------------sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
-| |. .-.++.+++++||.+++...|.
T Consensus 199 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 199 EKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp CCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred CccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 02 11 1256789999999999998776
No 71
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.28 E-value=0.088 Score=49.25 Aligned_cols=138 Identities=11% Similarity=0.099 Sum_probs=87.0
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK-KLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..++++||=+|=|.=.++..||+..+....|+|.-+... .+ +. . ++..+ ..++.++. -||+.......+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~-~l-~~---l---~~~a~~r~nv~~i~-~Da~~~~~~~~~- 143 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPR-VV-RE---L---LLVAQRRPNIFPLL-ADARFPQSYKSV- 143 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHH-HH-HH---H---HHHHHHCTTEEEEE-CCTTCGGGTTTT-
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHH-HH-HH---H---HHHhhhcCCeEEEE-cccccchhhhcc-
Confidence 456889999999999999999998875557887655432 11 10 0 11111 23555544 588876432222
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC------CcCcc-cHHHHHHhCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA------PFCKW-HIEELARKHS 186 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------PY~sW-nI~~LAa~aG 186 (421)
...||+|+.|.|+.. .. .-+...+..+|+|+|.+.++++.+. |...- ++++..+++|
T Consensus 144 ~~~~D~I~~d~a~~~-------------~~---~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 144 VENVDVLYVDIAQPD-------------QT---DIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSN 207 (232)
T ss_dssp CCCEEEEEECCCCTT-------------HH---HHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTT
T ss_pred ccceEEEEecCCChh-------------HH---HHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCC
Confidence 357999999988621 11 1234556779999999999986542 33222 3445555779
Q ss_pred cEEEEEeeCCCC
Q 014642 187 LLRLDCVQFRKE 198 (421)
Q Consensus 187 L~L~~~~~F~~~ 198 (421)
|.+.+.....|-
T Consensus 208 f~~~~~~~l~p~ 219 (232)
T 3id6_C 208 FETIQIINLDPY 219 (232)
T ss_dssp EEEEEEEECTTT
T ss_pred CEEEEEeccCCC
Confidence 999999877653
No 72
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.28 E-value=0.013 Score=51.76 Aligned_cols=134 Identities=17% Similarity=0.179 Sum_probs=86.6
Q ss_pred eeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 32 IMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 32 i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
+..+.+..+||=||=|.=.++..|++. +..|-.+++.+ ..++.++.++. .|+..+.
T Consensus 42 l~~~~~~~~vLDiG~G~G~~~~~l~~~---------~~vD~s~~~~~----------~a~~~~~~~~~-~d~~~~~---- 97 (219)
T 1vlm_A 42 VKCLLPEGRGVEIGVGTGRFAVPLKIK---------IGVEPSERMAE----------IARKRGVFVLK-GTAENLP---- 97 (219)
T ss_dssp HHHHCCSSCEEEETCTTSTTHHHHTCC---------EEEESCHHHHH----------HHHHTTCEEEE-CBTTBCC----
T ss_pred HHHhCCCCcEEEeCCCCCHHHHHHHHH---------hccCCCHHHHH----------HHHhcCCEEEE-cccccCC----
Confidence 334444779999999988888888654 55664333332 22222666554 4776653
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC--------------C-----
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA--------------P----- 172 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~--------------P----- 172 (421)
+....||.|+.++..--. ++ ...+++.+..+|+|+|.+.++..... +
T Consensus 98 ~~~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFV---DD-----------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNA 163 (219)
T ss_dssp SCTTCEEEEEEESCGGGS---SC-----------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTC
T ss_pred CCCCCeeEEEEcchHhhc---cC-----------HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhccc
Confidence 345789999998652221 11 24688888899999999999864321 1
Q ss_pred --cCcccHHHHHHhCCcEEEEEeeCCCCCCCCCcc
Q 014642 173 --FCKWHIEELARKHSLLRLDCVQFRKEDYPGYSN 205 (421)
Q Consensus 173 --Y~sWnI~~LAa~aGL~L~~~~~F~~~~YPGY~h 205 (421)
++.-.+.++.+++||..++..... ..|+|..
T Consensus 164 ~~~~~~~l~~~l~~~Gf~~~~~~~~~--~~~p~~~ 196 (219)
T 1vlm_A 164 RFFSTEELMDLMRKAGFEEFKVVQTL--FKHPSEL 196 (219)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEEEC--CSCGGGC
T ss_pred ccCCHHHHHHHHHHCCCeEEEEeccc--CCCCCcc
Confidence 233467778889999998876654 2355553
No 73
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=96.25 E-value=0.012 Score=50.77 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=67.2
Q ss_pred eEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcccE
Q 014642 40 QILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDR 119 (421)
Q Consensus 40 rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FDr 119 (421)
+||=||=|.=.++..|++. .+.++++.-.+ ..+.+ .+..++....-.+-.-+...|+.++. +....||.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 114 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRALDFS--KHMNE---IALKNIADANLNDRIQIVQGDVHNIP----IEDNYADL 114 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECBTTBCS----SCTTCEEE
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEEEECC--HHHHH---HHHHHHHhccccCceEEEEcCHHHCC----CCcccccE
Confidence 9999999999999999987 23455554433 33332 24444443322212334556777754 34578999
Q ss_pred EEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 120 IIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 120 IIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
|+.+...--. ++ ...+++.+..+|+|+|.+.|+-.
T Consensus 115 v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 115 IVSRGSVFFW---ED-----------VATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp EEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECchHhhc---cC-----------HHHHHHHHHHhCCCCCEEEEEec
Confidence 9998743221 11 24588888999999999999743
No 74
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.24 E-value=0.0065 Score=56.32 Aligned_cols=147 Identities=15% Similarity=0.198 Sum_probs=84.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC----CEEEeecccCCcCcc---
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG----ASIIHGVDATEMKEH--- 109 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G----v~VlhgVDATkL~~~--- 109 (421)
+..+||=+|=|.=.+++.|++... +.+|++.-.+ +++.+ -++.|++.+...| +.| +..|+.++...
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~--~~~~~---~a~~n~~~~~~~~l~~~v~~-~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERS--QEMAE---FARRSLELPDNAAFSARIEV-LEADVTLRAKARVE 108 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESS--HHHHH---HHHHHTTSGGGTTTGGGEEE-EECCTTCCHHHHHH
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHhhhhCCCcceEEE-EeCCHHHHhhhhhh
Confidence 456999999999999999998863 3466666554 33332 3566665532233 444 45588776211
Q ss_pred cccccCcccEEEEcCCCCCCCCCc--ccHHHHHHh--HHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhC
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKE--EDDEVIRMH--MSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKH 185 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkE--d~~~~I~~n--r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~a 185 (421)
..+....||.||.|-|.....+.. +..+.+..| ...+..|++.+..+|+++|.+.+.+... ..-.+.+++++.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~~ 185 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---SVAEIIAACGSR 185 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---GHHHHHHHHTTT
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---HHHHHHHHHHhc
Confidence 113457899999998876532111 111111111 1126789999999999999999876432 222344555443
Q ss_pred CcEEEEEee
Q 014642 186 SLLRLDCVQ 194 (421)
Q Consensus 186 GL~L~~~~~ 194 (421)
+...+...
T Consensus 186 -~~~~~i~~ 193 (260)
T 2ozv_A 186 -FGGLEITL 193 (260)
T ss_dssp -EEEEEEEE
T ss_pred -CCceEEEE
Confidence 55555443
No 75
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.24 E-value=0.017 Score=51.71 Aligned_cols=137 Identities=14% Similarity=0.042 Sum_probs=84.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..+..+||=||=|.=.++..|++.++ .+++++ |-.++..+ .+..++....- ..+.+ ...|+.++..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gv--D~s~~~l~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~----- 100 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGI--DMSSLFTA---QAKRRAEELGVSERVHF-IHNDAAGYVA----- 100 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEE--ESCHHHHH---HHHHHHHHTTCTTTEEE-EESCCTTCCC-----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEE--eCCHHHHH---HHHHHHHhcCCCcceEE-EECChHhCCc-----
Confidence 35678999999999999999998873 456554 43233332 24444332211 12333 4457777642
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC--CCC-----------------cC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT--TAP-----------------FC 174 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~P-----------------Y~ 174 (421)
...||.|+.+..---. .+ ...+++.+..+|+|+|.+.|+-.. ..| ++
T Consensus 101 ~~~fD~V~~~~~~~~~---~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 101 NEKCDVAACVGATWIA---GG-----------FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp SSCEEEEEEESCGGGT---SS-----------SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred CCCCCEEEECCChHhc---CC-----------HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 5789999985432111 01 257788899999999999987421 111 12
Q ss_pred cccHHHHHHhCCcEEEEEeeCCCC
Q 014642 175 KWHIEELARKHSLLRLDCVQFRKE 198 (421)
Q Consensus 175 sWnI~~LAa~aGL~L~~~~~F~~~ 198 (421)
.-.+..+.+++||..++....+..
T Consensus 167 ~~~~~~~l~~aGf~~~~~~~~~~~ 190 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVEMVLADQE 190 (256)
T ss_dssp HHHHHHHHHTTTBCCCEEEECCHH
T ss_pred HHHHHHHHHHCCCeeEEEEeCCHH
Confidence 234667888899988776554433
No 76
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.23 E-value=0.012 Score=54.77 Aligned_cols=135 Identities=12% Similarity=0.152 Sum_probs=86.7
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH---hCCCEEEeecccCCcCccccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK---KLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr---~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+||=||=|.=.++..|++. +.++++.-++ .+ +.+ .++.++.... ...+. +..-|+.++.. .
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s-~~-~~~---~a~~~~~~~~~~~~~~v~-~~~~d~~~~~~-----~ 148 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL---GWEVTALELS-TS-VLA---AFRKRLAEAPADVRDRCT-LVQGDMSAFAL-----D 148 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT---TCCEEEEESC-HH-HHH---HHHHHHHTSCHHHHTTEE-EEECBTTBCCC-----S
T ss_pred CCcEEEEeccCCHHHHHHHHc---CCeEEEEECC-HH-HHH---HHHHHHhhcccccccceE-EEeCchhcCCc-----C
Confidence 349999999999999999987 3467766554 22 222 1333332211 01233 44557777642 4
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC----------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP---------------------- 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P---------------------- 172 (421)
..||.||+.+.-.... ...-+..+++.+..+|+|+|.+.|+......
T Consensus 149 ~~fD~v~~~~~~~~~~-----------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 217 (299)
T 3g2m_A 149 KRFGTVVISSGSINEL-----------DEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVL 217 (299)
T ss_dssp CCEEEEEECHHHHTTS-----------CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------C
T ss_pred CCcCEEEECCcccccC-----------CHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEE
Confidence 7899999653211110 1233567888999999999999998754320
Q ss_pred ----------------------------------cCcccHHHHHHhCCcEEEEEeeCCC
Q 014642 173 ----------------------------------FCKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 173 ----------------------------------Y~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
|+.-.++.+.+++||.+++..+|..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 276 (299)
T 3g2m_A 218 HVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFAS 276 (299)
T ss_dssp CEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECT
T ss_pred EEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCC
Confidence 1233577899999999999988763
No 77
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.22 E-value=0.0042 Score=61.52 Aligned_cols=136 Identities=16% Similarity=0.214 Sum_probs=84.6
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEE-EeecccCCcCcccccccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASI-IHGVDATEMKEHSELSKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~V-lhgVDATkL~~~~~Lk~~ 115 (421)
..+||=+|=|.=.|+..|++.. .+..|++.-.+ +...+ .++.|++...-.+ +.| ++.-|+.+ .+...
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s--~~al~---~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~~~ 291 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDES--PMAVA---SSRLNVETNMPEALDRCEFMINNALS-----GVEPF 291 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGGGEEEEECSTTT-----TCCTT
T ss_pred CCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECc--HHHHH---HHHHHHHHcCCCcCceEEEEechhhc-----cCCCC
Confidence 3699999999999999999886 34567766554 22332 3555655432111 112 23345544 23457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc------cHHHHHHhCCcEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW------HIEELARKHSLLR 189 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW------nI~~LAa~aGL~L 189 (421)
+||.|+.|.|.-.... + ...+...||+.+..+|+|+|.+.|......+|..| +++.+++..||.+
T Consensus 292 ~fD~Ii~nppfh~~~~-------~--~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg~~~~~a~~~~F~V 362 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHA-------L--TDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVV 362 (375)
T ss_dssp CEEEEEECCCC----------------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHSCCEEEEECSSEEE
T ss_pred CeeEEEECCCcccCcc-------c--CHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcCCEEEEeeCCCEEE
Confidence 8999999999543211 1 12234578999999999999999987766666543 3444555666666
Q ss_pred EEEe
Q 014642 190 LDCV 193 (421)
Q Consensus 190 ~~~~ 193 (421)
.+..
T Consensus 363 ~~~~ 366 (375)
T 4dcm_A 363 LKAV 366 (375)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6553
No 78
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.21 E-value=0.013 Score=51.74 Aligned_cols=108 Identities=12% Similarity=0.119 Sum_probs=72.4
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----HhCCCEEEeecccCCcCcc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-----KKLGASIIHGVDATEMKEH 109 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-----r~~Gv~VlhgVDATkL~~~ 109 (421)
..+..+||-||=|.=.++..|++..+...++++.-.+ +.+.+ .++.|+..+ ....+.+. ..|++...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~-- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVD---DSVNNVRKDDPTLLSSGRVQLV-VGDGRMGY-- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHH---HHHHHHHHHCTHHHHTSSEEEE-ESCGGGCC--
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHH---HHHHHHHhhcccccCCCcEEEE-ECCcccCc--
Confidence 4467899999999999999999887644577776554 23332 244555542 22344444 44776432
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
.....||+|+.+.|... ++..+..+|+|+|.+.++..+..+
T Consensus 147 --~~~~~fD~i~~~~~~~~--------------------~~~~~~~~LkpgG~lv~~~~~~~~ 187 (226)
T 1i1n_A 147 --AEEAPYDAIHVGAAAPV--------------------VPQALIDQLKPGGRLILPVGPAGG 187 (226)
T ss_dssp --GGGCCEEEEEECSBBSS--------------------CCHHHHHTEEEEEEEEEEESCTTS
T ss_pred --ccCCCcCEEEECCchHH--------------------HHHHHHHhcCCCcEEEEEEecCCC
Confidence 22467999999987632 224567899999999999987643
No 79
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.19 E-value=0.0039 Score=61.39 Aligned_cols=160 Identities=16% Similarity=0.094 Sum_probs=97.0
Q ss_pred cceeeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-C-CCEEEeecccCC
Q 014642 28 EEKWIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-L-GASIIHGVDATE 105 (421)
Q Consensus 28 ~~K~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~-Gv~VlhgVDATk 105 (421)
...++..+..+.+||=+|=|.=.||+.||+. | +..|+|.-.+. + ..+ .++.|++...- . .+. +..-|+.+
T Consensus 211 ~~~~l~~~~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s~-~-al~---~a~~n~~~ngl~~~~v~-~~~~D~~~ 282 (396)
T 3c0k_A 211 SRLATRRYVENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTSQ-E-ALD---IARQNVELNKLDLSKAE-FVRDDVFK 282 (396)
T ss_dssp HHHHHHHHCTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESCH-H-HHH---HHHHHHHHTTCCGGGEE-EEESCHHH
T ss_pred HHHHHHHhhCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECCH-H-HHH---HHHHHHHHcCCCccceE-EEECCHHH
Confidence 3456666677889999999988999999875 2 44676665542 2 222 35666654211 1 233 34457766
Q ss_pred cCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-Ccc-c-HHHHH
Q 014642 106 MKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKW-H-IEELA 182 (421)
Q Consensus 106 L~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sW-n-I~~LA 182 (421)
+.........+||.||.|-|..+. ++.+ +......+..++..+..+|+|+|.|.++.+....- +.| + |.+.+
T Consensus 283 ~~~~~~~~~~~fD~Ii~dpP~~~~-~~~~----~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~ 357 (396)
T 3c0k_A 283 LLRTYRDRGEKFDVIVMDPPKFVE-NKSQ----LMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAA 357 (396)
T ss_dssp HHHHHHHTTCCEEEEEECCSSTTT-CSSS----SSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCEEEECCCCCCC-ChhH----HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 532111124689999999998774 2221 11223445688888999999999999998876532 222 2 33466
Q ss_pred HhCC--cEEEEEeeCCCCCCC
Q 014642 183 RKHS--LLRLDCVQFRKEDYP 201 (421)
Q Consensus 183 a~aG--L~L~~~~~F~~~~YP 201 (421)
.+.| +.++... -.+.++|
T Consensus 358 ~~~g~~~~~i~~~-~~~~d~p 377 (396)
T 3c0k_A 358 IDAGRDVQFIEQF-RQAADHP 377 (396)
T ss_dssp HHHTCCEEEEEEE-ECCTTSC
T ss_pred HHcCCeEEEEEEC-CCCCCCC
Confidence 6677 4444443 2344555
No 80
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.16 E-value=0.012 Score=51.43 Aligned_cols=115 Identities=14% Similarity=0.183 Sum_probs=80.1
Q ss_pred eeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 32 IMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 32 i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
+.+..+..+||=||=|.=.++..|+ .++++.-.+.. ++.+. ..|+.++.
T Consensus 62 l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~-~~d~~~~~---- 110 (215)
T 2zfu_A 62 LRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVT-VCDMAQVP---- 110 (215)
T ss_dssp HHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEE-ESCTTSCS----
T ss_pred HhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEE-EeccccCC----
Confidence 4445667899999999888777773 46777766543 34433 34666643
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLD 191 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~ 191 (421)
+....||.|+.++..- . ++ ...+++.+..+|+|+|.+.|+-......+.-.+.++.+++||.++.
T Consensus 111 ~~~~~fD~v~~~~~l~-~---~~-----------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLM-G---TN-----------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp CCTTCEEEEEEESCCC-S---SC-----------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred CCCCCEeEEEEehhcc-c---cC-----------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 3457899999987642 1 11 2467888899999999999975543323455778899999999887
Q ss_pred E
Q 014642 192 C 192 (421)
Q Consensus 192 ~ 192 (421)
.
T Consensus 176 ~ 176 (215)
T 2zfu_A 176 K 176 (215)
T ss_dssp E
T ss_pred E
Confidence 5
No 81
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.15 E-value=0.023 Score=54.12 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=71.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH------h-----CCCEEEeecccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK------K-----LGASIIHGVDAT 104 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr------~-----~Gv~VlhgVDAT 104 (421)
.++.+||=||=|.=.++.+|++..|....|+|.-.+ ++..+ .++.|++.+. . ..+.++ ..|+.
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~ln~~~~~~~~v~~~-~~d~~ 177 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHD---LAKKNYKHWRDSWKLSHVEEWPDNVDFI-HKDIS 177 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHH---HHHHHHHHHHHHHTTTCSSCCCCCEEEE-ESCTT
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHH---HHHHHHHHhhcccccccccccCCceEEE-ECChH
Confidence 467899999999999999999987654567776443 33333 3667777653 1 234443 44777
Q ss_pred CcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 105 EMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 105 kL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
++.. .+....||.|+.|.|+.- .++..+..+|+|+|.+.+...+
T Consensus 178 ~~~~--~~~~~~fD~V~~~~~~~~-------------------~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 178 GATE--DIKSLTFDAVALDMLNPH-------------------VTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp CCC---------EEEEEECSSSTT-------------------TTHHHHGGGEEEEEEEEEEESS
T ss_pred Hccc--ccCCCCeeEEEECCCCHH-------------------HHHHHHHHhcCCCcEEEEEeCC
Confidence 6532 233467999999877432 1678889999999999877654
No 82
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.15 E-value=0.006 Score=59.94 Aligned_cols=149 Identities=11% Similarity=0.032 Sum_probs=94.7
Q ss_pred ceeeeccC-CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCc
Q 014642 29 EKWIMHYS-SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEM 106 (421)
Q Consensus 29 ~K~i~~Ys-s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL 106 (421)
.+++..+. .+.+||=+|=|.=.||+.||+. | +..++|.-.+. +.+ + .++.|++...-. ++. +..-|+.++
T Consensus 208 ~~~~~~~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~-~~l-~---~a~~n~~~n~~~~~v~-~~~~d~~~~ 279 (396)
T 2as0_A 208 RLALEKWVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSP-RAI-E---TAKENAKLNGVEDRMK-FIVGSAFEE 279 (396)
T ss_dssp HHHHGGGCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCH-HHH-H---HHHHHHHHTTCGGGEE-EEESCHHHH
T ss_pred HHHHHHHhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCH-HHH-H---HHHHHHHHcCCCccce-EEECCHHHH
Confidence 44455555 6789999999999999999976 3 44677766542 222 2 355665432111 233 334466654
Q ss_pred CcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-Ccc-c-HHHHHH
Q 014642 107 KEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKW-H-IEELAR 183 (421)
Q Consensus 107 ~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sW-n-I~~LAa 183 (421)
.....-...+||.||.|-|..+. ++. .+.........++..+..+|+|+|.+.++.+....- +.| + +.+.+.
T Consensus 280 ~~~~~~~~~~fD~Vi~dpP~~~~-~~~----~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~ 354 (396)
T 2as0_A 280 MEKLQKKGEKFDIVVLDPPAFVQ-HEK----DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGA 354 (396)
T ss_dssp HHHHHHTTCCEEEEEECCCCSCS-SGG----GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCCEEEECCCCCCC-CHH----HHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 22111124689999999998774 222 344455667889999999999999999998876532 222 2 335666
Q ss_pred hCCcEEE
Q 014642 184 KHSLLRL 190 (421)
Q Consensus 184 ~aGL~L~ 190 (421)
..|..+.
T Consensus 355 ~~~~~~~ 361 (396)
T 2as0_A 355 KAGKFLK 361 (396)
T ss_dssp HTTEEEE
T ss_pred HcCCeEE
Confidence 7776554
No 83
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.15 E-value=0.0038 Score=60.15 Aligned_cols=113 Identities=21% Similarity=0.326 Sum_probs=75.0
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
..+||=||=|.=.++..|++.. ...++++.-.+ ....+ .++.|+... ...+.+ +..|+... ....|
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s--~~~l~---~a~~~~~~~-~~~~~~-~~~d~~~~------~~~~f 262 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVS--APAVE---ASRATLAAN-GVEGEV-FASNVFSE------VKGRF 262 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESB--HHHHH---HHHHHHHHT-TCCCEE-EECSTTTT------CCSCE
T ss_pred CCeEEEecCccCHHHHHHHHHC-CCCEEEEEECC--HHHHH---HHHHHHHHh-CCCCEE-EEcccccc------ccCCe
Confidence 4689999999999999998875 23356655443 22222 244454331 122444 44555442 14689
Q ss_pred cEEEEcCCCC-CCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcC
Q 014642 118 DRIIFNFPHA-GFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFC 174 (421)
Q Consensus 118 DrIIFNFPH~-G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~ 174 (421)
|.|+.|.|.. |. ..+......|++.+..+|+|+|.+.|......||.
T Consensus 263 D~Iv~~~~~~~g~----------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 310 (343)
T 2pjd_A 263 DMIISNPPFHDGM----------QTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYP 310 (343)
T ss_dssp EEEEECCCCCSSS----------HHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHH
T ss_pred eEEEECCCcccCc----------cCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcH
Confidence 9999999953 32 23455678999999999999999999887766654
No 84
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.14 E-value=0.054 Score=47.81 Aligned_cols=108 Identities=14% Similarity=0.174 Sum_probs=69.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++.+. +.++++.-.+ +.+.+ .++.+ ++..+-.-+...|+.++.. .
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~---~a~~~---~~~~~~~~~~~~d~~~~~~----~- 107 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMS--EKMLE---IAKNR---FRGNLKVKYIEADYSKYDF----E- 107 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESC--HHHHH---HHHHH---TCSCTTEEEEESCTTTCCC----C-
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHh---hccCCCEEEEeCchhccCC----C-
Confidence 44568999999999999999999863 4566665543 22222 12222 2223322344557777642 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
..||.|+.++..--. . ..-...+++.+..+|+|+|.+.++-.
T Consensus 108 ~~fD~v~~~~~l~~~---~---------~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 108 EKYDMVVSALSIHHL---E---------DEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp SCEEEEEEESCGGGS---C---------HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCceEEEEeCccccC---C---------HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 789999999753332 1 11124678888999999999988753
No 85
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.13 E-value=0.045 Score=47.26 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=74.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..++.. + ...|+|.-.+ +++.+ .++.|++...-..+. +..-|+.++... +...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~~~--~~~~ 112 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESD--QRSAA---VIARNIEALGLSGAT-LRRGAVAAVVAA--GTTS 112 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECC--HHHHH---HHHHHHHHHTCSCEE-EEESCHHHHHHH--CCSS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECC--HHHHH---HHHHHHHHcCCCceE-EEEccHHHHHhh--ccCC
Confidence 46789999999998888877764 2 3457666554 23332 356666654332333 445677765322 2357
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHh--ccCCCCeEEEEecCCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASG--MLRPRGEVHVSHKTTA 171 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~--lL~~~GeIHVTLk~g~ 171 (421)
.||.|+.|.|.... ...+..++..+.. +|+|+|.+.|......
T Consensus 113 ~fD~i~~~~p~~~~-------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 113 PVDLVLADPPYNVD-------------SADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSEEEECCCTTSC-------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CccEEEECCCCCcc-------------hhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 89999999995542 1334566666666 9999999999887654
No 86
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.10 E-value=0.012 Score=52.62 Aligned_cols=133 Identities=15% Similarity=0.118 Sum_probs=84.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++.. ...+++.-.+ +.+.+ .++.++.......+ -+...|+..+. +....
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~-~~~~~d~~~~~----~~~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDIT--EDFLV---QAKTYLGEEGKRVR-NYFCCGLQDFT----PEPDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESC--HHHHH---HHHHHTGGGGGGEE-EEEECCGGGCC----CCSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCC--HHHHH---HHHHHhhhcCCceE-EEEEcChhhcC----CCCCC
Confidence 46799999999999999998775 3467665443 22222 13333322211112 24455766654 23468
Q ss_pred ccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC-------C-----cCcccHHHHH
Q 014642 117 FDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-------P-----FCKWHIEELA 182 (421)
Q Consensus 117 FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------P-----Y~sWnI~~LA 182 (421)
||.|+.++. |+. ...+..+++.+..+|+|+|.+.|+-.... . ++.-.+.++.
T Consensus 147 fD~v~~~~~l~~~~--------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 212 (241)
T 2ex4_A 147 YDVIWIQWVIGHLT--------------DQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRII 212 (241)
T ss_dssp EEEEEEESCGGGSC--------------HHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHH
T ss_pred EEEEEEcchhhhCC--------------HHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHH
Confidence 999999943 332 12246788999999999999988543211 0 1223567788
Q ss_pred HhCCcEEEEEeeC
Q 014642 183 RKHSLLRLDCVQF 195 (421)
Q Consensus 183 a~aGL~L~~~~~F 195 (421)
+++||.+++....
T Consensus 213 ~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 213 CSAGLSLLAEERQ 225 (241)
T ss_dssp HHTTCCEEEEEEC
T ss_pred HHcCCeEEEeeec
Confidence 9999999988765
No 87
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.08 E-value=0.02 Score=51.73 Aligned_cols=135 Identities=11% Similarity=0.051 Sum_probs=85.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|+.... +..++|. |..++..+ -++.|++.+.-.++.++.+ |+.++..... ...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~v--D~s~~~~~---~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~-~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIV--DSLNKRIT---FLEKLSEALQLENTTFCHD-RAETFGQRKD-VRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEE--ESCHHHHH---HHHHHHHHHTCSSEEEEES-CHHHHTTCTT-TTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEE--eCCHHHHH---HHHHHHHHcCCCCEEEEec-cHHHhccccc-ccC
Confidence 4678999999998888888887543 4456655 43333332 3556666654334666554 7766542111 136
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEeeC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~F 195 (421)
.||.|+.+. +. + +..+++.+..+|+|+|.+.+.......-..-.+.+..+..|+.+.+...|
T Consensus 141 ~fD~V~~~~--~~-----~-----------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 141 SYDIVTARA--VA-----R-----------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSF 202 (240)
T ss_dssp CEEEEEEEC--CS-----C-----------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CccEEEEec--cC-----C-----------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEE
Confidence 799999865 11 1 45889999999999999987632211111123445667889999888766
Q ss_pred C
Q 014642 196 R 196 (421)
Q Consensus 196 ~ 196 (421)
.
T Consensus 203 ~ 203 (240)
T 1xdz_A 203 K 203 (240)
T ss_dssp E
T ss_pred e
Confidence 4
No 88
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.06 E-value=0.046 Score=53.40 Aligned_cols=139 Identities=13% Similarity=0.111 Sum_probs=90.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh--------CCCEEEeecccCCcC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK--------LGASIIHGVDATEMK 107 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~--------~Gv~VlhgVDATkL~ 107 (421)
.+..+||=||=|.=.++..|++.++....++++-.. .+.+ + .+..|++.+.. .++.++ .-|+.++.
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s-~~~l-~---~a~~~~~~~~~~~~g~~~~~~v~~~-~~d~~~l~ 155 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDML-DNQL-E---VARKYVEYHAEKFFGSPSRSNVRFL-KGFIENLA 155 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECC-HHHH-H---HHHHTHHHHHHHHHSSTTCCCEEEE-ESCTTCGG
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECC-HHHH-H---HHHHHHHHhhhhcccccCCCceEEE-EccHHHhh
Confidence 356799999999999999999988655677776554 2222 2 24455554421 244444 34888764
Q ss_pred ccc--ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC--------------
Q 014642 108 EHS--ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA-------------- 171 (421)
Q Consensus 108 ~~~--~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~-------------- 171 (421)
... .+....||.|+.|+...-. .+ ...+++.+..+|+|+|.+.++-....
T Consensus 156 ~~~~~~~~~~~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 221 (383)
T 4fsd_A 156 TAEPEGVPDSSVDIVISNCVCNLS---TN-----------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILY 221 (383)
T ss_dssp GCBSCCCCTTCEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHH
T ss_pred hcccCCCCCCCEEEEEEccchhcC---CC-----------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHh
Confidence 321 3456789999999765432 11 24788899999999999988642211
Q ss_pred ------CcCcccHHHHHHhCCcEEEEEee
Q 014642 172 ------PFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 172 ------PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.+..-++.++.+++||..++...
T Consensus 222 ~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 222 GECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HTTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred hcccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 12223566788899997665543
No 89
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.06 E-value=0.051 Score=47.42 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=79.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++. +.++++.-.+ +.+.+ .+..++. .++.+ ...|+.++.. . ..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~----~~~~~-~~~d~~~~~~----~-~~ 106 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPS--REMRM---IAKEKLP----KEFSI-TEGDFLSFEV----P-TS 106 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSC--HHHHH---HHHHHSC----TTCCE-ESCCSSSCCC----C-SC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCC--HHHHH---HHHHhCC----CceEE-EeCChhhcCC----C-CC
Confidence 5679999999999999999986 3466665443 22222 1222222 24544 3457777632 2 78
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC------------------------
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP------------------------ 172 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P------------------------ 172 (421)
||.|+.+...--. .+ .-...+++.+..+|+|+|.+.|+...-.+
T Consensus 107 fD~v~~~~~l~~~---~~---------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (220)
T 3hnr_A 107 IDTIVSTYAFHHL---TD---------DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQ 174 (220)
T ss_dssp CSEEEEESCGGGS---CH---------HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred eEEEEECcchhcC---Ch---------HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcc
Confidence 9999999643322 10 11145788889999999999998532111
Q ss_pred ----cCcccHHHHHHhCCcEEEEEe
Q 014642 173 ----FCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 173 ----Y~sWnI~~LAa~aGL~L~~~~ 193 (421)
++.=.+.++.+++||.++...
T Consensus 175 ~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 175 TEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp HSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHCCCEEEEee
Confidence 011246678888999877664
No 90
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.05 E-value=0.026 Score=49.76 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=66.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.....+||=||=|.=.++..|++. .++++.-.+ +++.+ .++.++.... ..+.++ ..|+.++. +.
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~~- 94 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----YEVTGVDLS--EEMLE---IAQEKAMETN-RHVDFW-VQDMRELE----LP- 94 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESC--HHHHH---HHHHHHHHTT-CCCEEE-ECCGGGCC----CS-
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECC--HHHHH---HHHHhhhhcC-CceEEE-EcChhhcC----CC-
Confidence 345689999999999999999876 356555443 22322 2444443322 235444 44776653 22
Q ss_pred CcccEEEEcC---CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 115 RKFDRIIFNF---PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 115 ~~FDrIIFNF---PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
..||.|+.++ .|.. +..-+..+++.+..+|+|+|.+.++.
T Consensus 95 ~~fD~v~~~~~~~~~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQ-------------TEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp SCEEEEEECTTGGGGCC-------------SHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcC-------------CHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 6799999875 3432 12234678889999999999998854
No 91
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.00 E-value=0.011 Score=50.21 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=69.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk 113 (421)
..+..+||=+|=|.=.++..|++. + ..++++.-.+ +++.+ .++.|++...-. .+. +..-|+.+.-. ..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~~---~~ 97 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKN--RKAQA---IIQDNIIMTKAENRFT-LLKMEAERAID---CL 97 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCC--HHHHH---HHHHHHHTTTCGGGEE-EECSCHHHHHH---HB
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCceE-EEECcHHHhHH---hh
Confidence 456789999999999999999876 3 3467776554 22222 244554432111 133 33446665211 11
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
...||.|+.|.|... ....+++..+.. ..+|+++|.+.++......
T Consensus 98 ~~~fD~i~~~~~~~~-----------~~~~~~~~~l~~--~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 98 TGRFDLVFLDPPYAK-----------ETIVATIEALAA--KNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp CSCEEEEEECCSSHH-----------HHHHHHHHHHHH--TTCEEEEEEEEEEEETTCC
T ss_pred cCCCCEEEECCCCCc-----------chHHHHHHHHHh--CCCcCCCcEEEEEECCccc
Confidence 356999999988521 112333444433 5899999999998876543
No 92
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.00 E-value=0.041 Score=46.15 Aligned_cols=127 Identities=16% Similarity=0.074 Sum_probs=79.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE--EEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS--IIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~--VlhgVDATkL~~~~~Lk 113 (421)
.+..+||=||=|.=.++..|++.++ +..+++.-.+ ++..+ .++.|+. +.|.. |...-|+.. .....
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~--~~~~~---~a~~~~~---~~~~~~~~~~~~d~~~---~~~~~ 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEIS--EERRE---RILSNAI---NLGVSDRIAVQQGAPR---AFDDV 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSC--HHHHH---HHHHHHH---TTTCTTSEEEECCTTG---GGGGC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCC--HHHHH---HHHHHHH---HhCCCCCEEEecchHh---hhhcc
Confidence 4567999999999999999998873 4466665444 22322 2444544 33432 344455543 11111
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
...||.|+.+++.-. ..+++.+..+|+++|.+.++..... +...+..+-++.|+.+.+..
T Consensus 92 ~~~~D~i~~~~~~~~------------------~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA------------------PGVFAAAWKRLPVGGRLVANAVTVE--SEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CSCCSEEEECC-TTC------------------TTHHHHHHHTCCTTCEEEEEECSHH--HHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCCEEEECCcccH------------------HHHHHHHHHhcCCCCEEEEEeeccc--cHHHHHHHHHHcCCeeEEEE
Confidence 278999998876421 3678888899999999998776532 23344555566677666543
Q ss_pred e
Q 014642 194 Q 194 (421)
Q Consensus 194 ~ 194 (421)
.
T Consensus 152 ~ 152 (178)
T 3hm2_A 152 I 152 (178)
T ss_dssp E
T ss_pred e
Confidence 3
No 93
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.98 E-value=0.023 Score=47.75 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=80.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCC-cCccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATE-MKEHSEL 112 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATk-L~~~~~L 112 (421)
..+..+||-+|=|.=.++..|++.. ..+++.-.+. +..+ .+..|+....- ..+.+ ...|+.+ +..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~--~~~~---~a~~~~~~~~~~~~~~~-~~~d~~~~~~~---- 97 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNP--EAIS---TTEMNLQRHGLGDNVTL-MEGDAPEALCK---- 97 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCH--HHHH---HHHHHHHHTTCCTTEEE-EESCHHHHHTT----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCH--HHHH---HHHHHHHHcCCCcceEE-EecCHHHhccc----
Confidence 3467799999999999999998875 4677765542 2222 24445443321 12333 3346554 211
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLR 189 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L 189 (421)
...||.|+.+.|.- + +..+++.+..+|+++|.+.+.... +...+.+.++.++.|+.+
T Consensus 98 -~~~~D~v~~~~~~~--------------~---~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 98 -IPDIDIAVVGGSGG--------------E---LQEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGFDV 154 (192)
T ss_dssp -SCCEEEEEESCCTT--------------C---HHHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTCCC
T ss_pred -CCCCCEEEECCchH--------------H---HHHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCCce
Confidence 14799999986531 0 257888999999999999988754 235567788888888843
No 94
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.98 E-value=0.01 Score=56.61 Aligned_cols=114 Identities=19% Similarity=0.287 Sum_probs=71.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK----KLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr----~~Gv~VlhgVDATkL~~~~~L 112 (421)
...+||.||=|+=.++..|+++.+ ..+|++.-.|. ++.+ -+++|+..+. ...++++.+ |+.+.-..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~~~---~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~--- 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDG--LVIE---AARKYLKQTSCGFDDPRAEIVIA-NGAEYVRK--- 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEES-CHHHHGGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 457999999999999999998753 45788777663 2222 2445555442 234666555 66553111
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
...+||.||.|.|+.+. +.. .......||+.+..+|+|+|.+.+....
T Consensus 160 ~~~~fD~Ii~d~~~~~~-~~~--------~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 160 FKNEFDVIIIDSTDPTA-GQG--------GHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp CSSCEEEEEEEC-------------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCceEEEEcCCCccc-Cch--------hhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 24679999999875421 110 0112368999999999999999887543
No 95
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.96 E-value=0.016 Score=49.65 Aligned_cols=116 Identities=20% Similarity=0.174 Sum_probs=76.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCC--------CcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSA--------SNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEM 106 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~--------~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL 106 (421)
..++.+||-||=|.=.++..|++.++.. ..|+|.-.+... ...++.++-..|++.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------------~~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------------PLEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------------CCTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------------cCCCCeEEEeccCCCH
Confidence 3457899999999999999999987642 578877666421 0124554424566554
Q ss_pred Cccc----ccccCcccEEEEcC-CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 107 KEHS----ELSKRKFDRIIFNF-PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 107 ~~~~----~Lk~~~FDrIIFNF-PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
.... .+....||.|+.|+ ||+.+ .. .........++..+++.+..+|+|+|.+.++...+
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATG--FR--DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCS--CH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCC--Cc--ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 2110 12346899999998 45432 11 01122234566789999999999999999987665
No 96
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=95.96 E-value=0.025 Score=51.88 Aligned_cols=131 Identities=13% Similarity=0.171 Sum_probs=87.2
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~Lk~ 114 (421)
..+||=||=|.=.++..|++. +..++++-.+ +++.+ .+..++ +..|. .-+...|+.++.. +..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~---~~~ 134 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLS--AQMID---RAKQAA---EAKGVSDNMQFIHCAAQDVAS---HLE 134 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHH---HC-CCGGGEEEEESCGGGTGG---GCS
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECC--HHHHH---HHHHHH---HhcCCCcceEEEEcCHHHhhh---hcC
Confidence 569999999999999999987 3467766544 22222 133333 33343 2345567777652 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC------------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT------------------------ 170 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------------------------ 170 (421)
..||.|+.+...--. .+ ...+++.+..+|+|+|.+.|+..+.
T Consensus 135 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (285)
T 4htf_A 135 TPVDLILFHAVLEWV---AD-----------PRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKK 200 (285)
T ss_dssp SCEEEEEEESCGGGC---SC-----------HHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC-
T ss_pred CCceEEEECchhhcc---cC-----------HHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccc
Confidence 789999998654332 11 1468888999999999999876321
Q ss_pred -------CCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 171 -------APFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 171 -------~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
.+++.-.+..+.+++||.+++...+.
T Consensus 201 ~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 201 KRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp ---CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred cccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 11233467888999999999887764
No 97
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.94 E-value=0.078 Score=49.63 Aligned_cols=135 Identities=15% Similarity=0.140 Sum_probs=83.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.+..+||=||=|.=.++..|++.+. ...++++-.+ .+.+ .++.++....-. .+++. ..|+.++. +.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~---~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~----~~- 230 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA---SVLE---VAKENARIQGVASRYHTI-AGSAFEVD----YG- 230 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH---HHHH---HHHHHHHHHTCGGGEEEE-ESCTTTSC----CC-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH---HHHH---HHHHHHHhcCCCcceEEE-ecccccCC----CC-
Confidence 5678999999999999999999873 3456655443 3333 245555443211 24433 34666542 22
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC-----------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----------------------- 171 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----------------------- 171 (421)
..||.|+.+...-.. . ..-...+++.+..+|+|+|.+.|.-....
T Consensus 231 ~~~D~v~~~~~l~~~-~-----------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHF-D-----------VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNG 298 (335)
T ss_dssp SCEEEEEEESCGGGS-C-----------HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSC
T ss_pred CCCcEEEEcchhccC-C-----------HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCC
Confidence 239999996653322 1 11234677888899999998887643211
Q ss_pred -CcCcccHHHHHHhCCcEEEEEeeC
Q 014642 172 -PFCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 172 -PY~sWnI~~LAa~aGL~L~~~~~F 195 (421)
.++.=++.++.+++||..++..+.
T Consensus 299 ~~~t~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 299 DAYTFAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp CCCCHHHHHHHHHHTTCSEEEEECC
T ss_pred CcCCHHHHHHHHHHCCCCeeeEEEC
Confidence 111224566788899998887654
No 98
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=95.92 E-value=0.016 Score=51.70 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=83.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++.. ...+++.-.+ . .+.+ .++.++... ..+.+ ...|+.++. +....
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s-~-~~~~---~a~~~~~~~--~~~~~-~~~d~~~~~----~~~~~ 158 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPV-K-HMLE---EAKRELAGM--PVGKF-ILASMETAT----LPPNT 158 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESC-H-HHHH---HHHHHTTTS--SEEEE-EESCGGGCC----CCSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCC-H-HHHH---HHHHHhccC--CceEE-EEccHHHCC----CCCCC
Confidence 56799999999999999999875 3356665433 2 2222 133332221 22333 344776653 34578
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC--CC-----------cCcccHHHHHH
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT--AP-----------FCKWHIEELAR 183 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g--~P-----------Y~sWnI~~LAa 183 (421)
||.|+.++..--. ...-+..+++.+..+|+|+|.+.|+-... .+ ++.-.+.++.+
T Consensus 159 fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 226 (254)
T 1xtp_A 159 YDLIVIQWTAIYL------------TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFN 226 (254)
T ss_dssp EEEEEEESCGGGS------------CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHH
T ss_pred eEEEEEcchhhhC------------CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHH
Confidence 9999998752211 01124678888999999999998876311 11 12235677889
Q ss_pred hCCcEEEEEeeC
Q 014642 184 KHSLLRLDCVQF 195 (421)
Q Consensus 184 ~aGL~L~~~~~F 195 (421)
++||.+++....
T Consensus 227 ~aGf~~~~~~~~ 238 (254)
T 1xtp_A 227 ESGVRVVKEAFQ 238 (254)
T ss_dssp HHTCCEEEEEEC
T ss_pred HCCCEEEEeeec
Confidence 999999887654
No 99
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.85 E-value=0.058 Score=47.53 Aligned_cols=103 Identities=23% Similarity=0.274 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++. + ..++++.-.+ +++.+ .+..++ ...++.+ ...|+..+. +...
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s--~~~~~---~a~~~~---~~~~~~~-~~~d~~~~~----~~~~ 106 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLS--EKMLA---RARAAG---PDTGITY-ERADLDKLH----LPQD 106 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESC--HHHHH---HHHHTS---CSSSEEE-EECCGGGCC----CCTT
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCC--HHHHH---HHHHhc---ccCCceE-EEcChhhcc----CCCC
Confidence 35679999999999999999886 2 2367766554 22221 122221 1123443 345776653 3457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.||.|+.++..--. ++ ...+++.+..+|+|+|.+.|+.
T Consensus 107 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 107 SFDLAYSSLALHYV---ED-----------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp CEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEecccccc---ch-----------HHHHHHHHHHhcCcCcEEEEEe
Confidence 89999998753321 11 3478888999999999999876
No 100
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.85 E-value=0.063 Score=47.66 Aligned_cols=135 Identities=14% Similarity=0.133 Sum_probs=84.3
Q ss_pred CeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCccc
Q 014642 39 HQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFD 118 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FD 118 (421)
.+||=||=|.=.++..|++. +..++++-++ +...+ .+..++.......-.-+...|++++. ....||
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~fD 134 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP---ERFVVGLDIS--ESALA---KANETYGSSPKAEYFSFVKEDVFTWR-----PTELFD 134 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT---TEEEEEECSC--HHHHH---HHHHHHTTSGGGGGEEEECCCTTTCC-----CSSCEE
T ss_pred CCEEEeCCCCCHHHHHHHhC---CCeEEEEECC--HHHHH---HHHHHhhccCCCcceEEEECchhcCC-----CCCCee
Confidence 49999999999999999763 3456655443 22322 13333332111111234456777754 235899
Q ss_pred EEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC------CCc--CcccHHHHHHhCCcEEE
Q 014642 119 RIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT------APF--CKWHIEELARKHSLLRL 190 (421)
Q Consensus 119 rIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------~PY--~sWnI~~LAa~aGL~L~ 190 (421)
.|+.+....-. ..+ -...+++.+..+|+|+|.+.+..... .|+ +.=.+..+.+++||.++
T Consensus 135 ~v~~~~~l~~~-~~~-----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 135 LIFDYVFFCAI-EPE-----------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp EEEEESSTTTS-CGG-----------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred EEEEChhhhcC-CHH-----------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 99987654432 111 13578889999999999988865432 232 22256678889999999
Q ss_pred EEeeCCCC
Q 014642 191 DCVQFRKE 198 (421)
Q Consensus 191 ~~~~F~~~ 198 (421)
+.......
T Consensus 203 ~~~~~~~~ 210 (235)
T 3lcc_A 203 SVEENPHA 210 (235)
T ss_dssp EEEECTTC
T ss_pred EEEecCCc
Confidence 88776643
No 101
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.84 E-value=0.11 Score=49.47 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=83.8
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk 113 (421)
+++..+||=||=|.=.++..|++.+. ...++ ..|- ..+.+ .+..++....-. ++++ ...|+.+ . +.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~--~~D~-~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~---~--~~ 246 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRGT--LVEL-AGPAE---RARRRFADAGLADRVTV-AEGDFFK---P--LP 246 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEEE--EEEC-HHHHH---HHHHHHHHTTCTTTEEE-EECCTTS---C--CS
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEEE--EEeC-HHHHH---HHHHHHHhcCCCCceEE-EeCCCCC---c--CC
Confidence 45678999999999999999999873 33454 4565 44443 245554432111 2433 3346543 1 11
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec--C---C------------------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK--T---T------------------ 170 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk--~---g------------------ 170 (421)
..||.|+.+...--. . ..-...+++.+..+|+|+|.+.|.-. . .
T Consensus 247 -~~~D~v~~~~vl~~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (374)
T 1qzz_A 247 -VTADVVLLSFVLLNW---S---------DEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMG 313 (374)
T ss_dssp -CCEEEEEEESCGGGS---C---------HHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHS
T ss_pred -CCCCEEEEeccccCC---C---------HHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCC
Confidence 239999998754322 1 11124678888999999999887543 1 1
Q ss_pred -CCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 171 -APFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 171 -~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
..++.=++.++.+++||..++..+..
T Consensus 314 ~~~~~~~~~~~ll~~aGf~~~~~~~~~ 340 (374)
T 1qzz_A 314 GRVRTRDEVVDLAGSAGLALASERTSG 340 (374)
T ss_dssp CCCCCHHHHHHHHHTTTEEEEEEEEEC
T ss_pred CcCCCHHHHHHHHHHCCCceEEEEECC
Confidence 11122245667888999998887664
No 102
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.78 E-value=0.093 Score=50.80 Aligned_cols=148 Identities=8% Similarity=0.001 Sum_probs=92.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+++||=+|=|-=..|+.||+..+....|+|.-.+. +.+ ..+++|++.+.-.++.+ ..-|+.++..... ...
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~-~~l----~~~~~n~~r~g~~~v~~-~~~D~~~~~~~~~-~~~ 173 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDA-KRL----ASMATLLARAGVSCCEL-AEEDFLAVSPSDP-RYH 173 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCH-HHH----HHHHHHHHHTTCCSEEE-EECCGGGSCTTCG-GGT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCH-HHH----HHHHHHHHHcCCCeEEE-EeCChHhcCcccc-ccC
Confidence 4577999998888888899998775455788776652 222 23566665543223444 4558888754311 125
Q ss_pred cccEEEEcCCCCCCCC--C-ccc-------HHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCc-CcccHHHHHHh
Q 014642 116 KFDRIIFNFPHAGFHG--K-EED-------DEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPF-CKWHIEELARK 184 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~G--k-Ed~-------~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY-~sWnI~~LAa~ 184 (421)
.||+|+.|=|..|..- + .|. ...+.....+-...+..|..+|+ +|.+..+-|+-.|- +...|..+.++
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~ 252 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQ 252 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTT
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHh
Confidence 7999999999988521 1 010 01223334555678888988887 89988888876654 55677775544
Q ss_pred C-C-cEEEE
Q 014642 185 H-S-LLRLD 191 (421)
Q Consensus 185 a-G-L~L~~ 191 (421)
. + +.+..
T Consensus 253 ~~~~~~~~~ 261 (309)
T 2b9e_A 253 NPGAFRLAP 261 (309)
T ss_dssp STTTEEECC
T ss_pred CCCcEEEec
Confidence 3 5 76653
No 103
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.76 E-value=0.26 Score=42.86 Aligned_cols=123 Identities=16% Similarity=0.136 Sum_probs=80.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..++.+||=||=|.=.++..|++.. ...+++|.-.+ ++..+ .++.|++...-..+.+ ..-|+.+.-. ..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~~~----~~ 106 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERN--PQYLG---FIRDNLKKFVARNVTL-VEAFAPEGLD----DL 106 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECC--HHHHH---HHHHHHHHHTCTTEEE-EECCTTTTCT----TS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCC--HHHHH---HHHHHHHHhCCCcEEE-EeCChhhhhh----cC
Confidence 3457899999999999999999885 34567766554 22222 3556665543223333 3445543321 12
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCc
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSL 187 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL 187 (421)
..||.|+.+.+.-. +..+++.+..+|+++|.+.+...... +.-.+.++.++.|+
T Consensus 107 ~~~D~i~~~~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 107 PDPDRVFIGGSGGM-----------------LEEIIDAVDRRLKSEGVIVLNAVTLD--TLTKAVEFLEDHGY 160 (204)
T ss_dssp CCCSEEEESCCTTC-----------------HHHHHHHHHHHCCTTCEEEEEECBHH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCcC-----------------HHHHHHHHHHhcCCCeEEEEEecccc--cHHHHHHHHHHCCC
Confidence 56999999875421 34788999999999999999754421 23355667778887
No 104
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.76 E-value=0.067 Score=44.84 Aligned_cols=130 Identities=11% Similarity=0.112 Sum_probs=83.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++.. . ++++.-.+ .+..+. +..+ ..++.++.+ | ..+..
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s--~~~~~~---a~~~-----~~~v~~~~~-d-------~~~~~ 73 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDIN--VIALKE---VKEK-----FDSVITLSD-P-------KEIPD 73 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSC--HHHHHH---HHHH-----CTTSEEESS-G-------GGSCT
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCC--HHHHHH---HHHh-----CCCcEEEeC-C-------CCCCC
Confidence 3456799999999999999999876 2 66665554 222221 2222 224554433 3 23446
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC------C----cCcccHHHHHHh
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA------P----FCKWHIEELARK 184 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~------P----Y~sWnI~~LAa~ 184 (421)
..||.|+.+...--. ++ ...+++.+..+|+++|.+.++-.... | ++..++..+.+
T Consensus 74 ~~~D~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 138 (170)
T 3i9f_A 74 NSVDFILFANSFHDM---DD-----------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS- 138 (170)
T ss_dssp TCEEEEEEESCSTTC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-
T ss_pred CceEEEEEccchhcc---cC-----------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-
Confidence 789999998765432 11 24788888999999999998854332 1 12234555555
Q ss_pred CCcEEEEEeeCCCCCCC
Q 014642 185 HSLLRLDCVQFRKEDYP 201 (421)
Q Consensus 185 aGL~L~~~~~F~~~~YP 201 (421)
||.+++...+.+..|.
T Consensus 139 -Gf~~~~~~~~~~~~~~ 154 (170)
T 3i9f_A 139 -NFVVEKRFNPTPYHFG 154 (170)
T ss_dssp -TEEEEEEECSSTTEEE
T ss_pred -CcEEEEccCCCCceEE
Confidence 9999998877655443
No 105
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=95.75 E-value=0.025 Score=49.04 Aligned_cols=125 Identities=14% Similarity=0.044 Sum_probs=79.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
++.+||=||=|.=.++..|++.++ +.++++.-.+ +...+ .+..|+..+.-.++. +...|+.++. ....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~-----~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSL--GKRVR---FLRQVQHELKLENIE-PVQSRVEEFP-----SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESC--HHHHH---HHHHHHHHTTCSSEE-EEECCTTTSC-----CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCeE-EEecchhhCC-----ccCC
Confidence 467999999999999999998763 4466665443 22322 245555544322333 4556777654 2367
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
||.|+.|.- ++ +..++..+..+|+|+|.+.+..-. ...-.+.++.+ |+.+.+..+|.
T Consensus 133 ~D~i~~~~~-------~~-----------~~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~--g~~~~~~~~~~ 189 (207)
T 1jsx_A 133 FDGVISRAF-------AS-----------LNDMVSWCHHLPGEQGRFYALKGQ---MPEDEIALLPE--EYQVESVVKLQ 189 (207)
T ss_dssp EEEEECSCS-------SS-----------HHHHHHHHTTSEEEEEEEEEEESS---CCHHHHHTSCT--TEEEEEEEEEE
T ss_pred cCEEEEecc-------CC-----------HHHHHHHHHHhcCCCcEEEEEeCC---CchHHHHHHhc--CCceeeeeeec
Confidence 999998631 11 347888999999999999987532 22223333333 88888776664
No 106
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=95.73 E-value=0.014 Score=53.11 Aligned_cols=146 Identities=12% Similarity=0.118 Sum_probs=92.4
Q ss_pred eeeeccCC-CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc
Q 014642 30 KWIMHYSS-KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE 108 (421)
Q Consensus 30 K~i~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~ 108 (421)
.|...|.. ..+||=||=|.=.++..||+... ..++++.-.. ....+ .+..|++...-.++ -+...||..+-.
T Consensus 26 d~~~~f~~~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s--~~~l~---~a~~~~~~~~l~nv-~~~~~Da~~~l~ 98 (218)
T 3dxy_A 26 DFPALFGREAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVH--SPGVG---ACLASAHEEGLSNL-RVMCHDAVEVLH 98 (218)
T ss_dssp CHHHHHSSCCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSC--HHHHH---HHHHHHHHTTCSSE-EEECSCHHHHHH
T ss_pred CHHHHcCCCCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEec--HHHHH---HHHHHHHHhCCCcE-EEEECCHHHHHH
Confidence 34445554 56899999999999999998763 4567776443 22222 24455543322233 345668777421
Q ss_pred ccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcE
Q 014642 109 HSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLL 188 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~ 188 (421)
. .+....||.|+.|||-.-.+... ...+.+-..|++.+..+|+|||.++|.... .+|-.|-++.+.+..++.
T Consensus 99 ~-~~~~~~~d~v~~~~~~p~~~~~~------~~rr~~~~~~l~~~~r~LkpGG~l~i~td~-~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 99 K-MIPDNSLRMVQLFFPDPWHKARH------NKRRIVQVPFAELVKSKLQLGGVFHMATDW-EPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp H-HSCTTCEEEEEEESCCCCCSGGG------GGGSSCSHHHHHHHHHHEEEEEEEEEEESC-HHHHHHHHHHHHTSTTEE
T ss_pred H-HcCCCChheEEEeCCCCccchhh------hhhhhhhHHHHHHHHHHcCCCcEEEEEeCC-HHHHHHHHHHHHhCCCcc
Confidence 1 13467899999998765321111 011122246899999999999999998754 357778777777777765
Q ss_pred EE
Q 014642 189 RL 190 (421)
Q Consensus 189 L~ 190 (421)
..
T Consensus 171 ~~ 172 (218)
T 3dxy_A 171 NL 172 (218)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=95.71 E-value=0.091 Score=47.26 Aligned_cols=136 Identities=16% Similarity=0.121 Sum_probs=82.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..++.+||=||=|.=.++..|++..+ ...|+|.-.+. +.+ +. ..++.+. ..++..+. -|++.+.....+.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~-~~l-~~---~~~~a~~--~~~v~~~~-~d~~~~~~~~~~~- 124 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSA-KPF-EK---LLELVRE--RNNIIPLL-FDASKPWKYSGIV- 124 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCH-HHH-HH---HHHHHHH--CSSEEEEC-SCTTCGGGTTTTC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCH-HHH-HH---HHHHHhc--CCCeEEEE-cCCCCchhhcccc-
Confidence 35678999999999999999998876 44677655542 221 10 1111111 13454444 3777753322233
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHH-------HHhCCc
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEEL-------ARKHSL 187 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~L-------Aa~aGL 187 (421)
..||.|+.|.++.- -...+++.+..+|+|||.+.++++.+..-..+..+++ .+++ |
T Consensus 125 ~~fD~V~~~~~~~~----------------~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f 187 (210)
T 1nt2_A 125 EKVDLIYQDIAQKN----------------QIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-F 187 (210)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-S
T ss_pred cceeEEEEeccChh----------------HHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-c
Confidence 68999999954321 1235678899999999999999754311122222221 3445 9
Q ss_pred EEEEEeeCCC
Q 014642 188 LRLDCVQFRK 197 (421)
Q Consensus 188 ~L~~~~~F~~ 197 (421)
.+.+.....+
T Consensus 188 ~~~~~~~~~p 197 (210)
T 1nt2_A 188 KIVKHGSLMP 197 (210)
T ss_dssp EEEEEEECTT
T ss_pred EEeeeecCCC
Confidence 9999887653
No 108
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.69 E-value=0.035 Score=49.53 Aligned_cols=106 Identities=21% Similarity=0.212 Sum_probs=69.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.+..+||-||=|.=.++..|++.++ +.+|++.-.+ .+..+ .++.|++.+.-. .+.+ ...|+....... ...
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~-~~~ 124 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-EATIVSIERD--ERRYE---EAHKHVKALGLESRIEL-LFGDALQLGEKL-ELY 124 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCC--HHHHH---HHHHHHHHTTCTTTEEE-ECSCGGGSHHHH-TTS
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEE-EECCHHHHHHhc-ccC
Confidence 4567999999999999999999874 4567666544 23322 255555433211 2333 344666531110 014
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..||.|+.+.|... ...+++.+..+|+++|.|.++
T Consensus 125 ~~fD~I~~~~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQ-----------------YRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGGSC-----------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCHHH-----------------HHHHHHHHHHHcCCCeEEEEE
Confidence 67999999987431 357889999999999999886
No 109
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.68 E-value=0.0077 Score=58.43 Aligned_cols=109 Identities=18% Similarity=0.256 Sum_probs=67.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeecccCCc-Ccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGASIIHGVDATEM-KEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv~VlhgVDATkL-~~~~~ 111 (421)
...+||.||=|+=.++..|+++.+ ..+|++.-.|. ++.+ -+++|+..+ ....++++ .-|+.+. ..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~i~---~Ar~~~~~~~~~~~~~rv~~~-~~D~~~~l~~--- 177 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDE--MVID---VAKKFLPGMSCGFSHPKLDLF-CGDGFEFLKN--- 177 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCH--HHHH---HHHHHCTTTSGGGGCTTEEEE-CSCHHHHHHH---
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCH--HHHH---HHHHHHHHhccccCCCCEEEE-EChHHHHHHh---
Confidence 457999999999999999998753 45788777663 2222 234444332 22234443 3466552 21
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHH-HHHHHhhHhccCCCCeEEEEe
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLV-EGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL-~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|.|+.-. . ...|. ..||+.+..+|+|+|.+.+..
T Consensus 178 -~~~~fD~Ii~d~~~~~~--~---------~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 178 -HKNEFDVIITDSSDPVG--P---------AESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp -CTTCEEEEEECCC------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred -cCCCceEEEEcCCCCCC--c---------chhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 24689999999875421 1 12344 799999999999999998875
No 110
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.67 E-value=0.028 Score=48.56 Aligned_cols=113 Identities=12% Similarity=0.061 Sum_probs=69.5
Q ss_pred eccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 33 MHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 33 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
.+..+..+||=||=|.-.+++.++... +.++++.-.+ +++.+ .++.++.... ..+.++ ..|+.++. +
T Consensus 19 ~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~ 85 (209)
T 2p8j_A 19 NESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEIS--DLQLK---KAENFSRENN-FKLNIS-KGDIRKLP----F 85 (209)
T ss_dssp HHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECC--HHHHH---HHHHHHHHHT-CCCCEE-ECCTTSCC----S
T ss_pred hccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECC--HHHHH---HHHHHHHhcC-CceEEE-ECchhhCC----C
Confidence 345567899999999887765555443 3456654433 33333 2444443322 344443 44777653 3
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
....||.|+.+...... . ..-...+++.+..+|+|+|.+.++..+.
T Consensus 86 ~~~~fD~v~~~~~l~~~-~-----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHM-R-----------KNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CTTCEEEEEECSCGGGS-C-----------HHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCceeEEEEcChHHhC-C-----------HHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 45789999987542221 0 1224578888999999999999987653
No 111
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.66 E-value=0.04 Score=48.58 Aligned_cols=111 Identities=16% Similarity=0.127 Sum_probs=69.6
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
...+..+||=||=|.=.++..|++.++.+..|++.-.+. +..+ .++.|++...-.+-.-+..-|+.+.-....-.
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 129 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASE--KHAD---IARSNIERANLNDRVEVRTGLALDSLQQIENE 129 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCH--HHHH---HHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCH--HHHH---HHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence 345678999999999999999999875445676665542 2222 35556554322221234445665432111101
Q ss_pred -cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 114 -KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 114 -~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...||.|+.+.++.. ...+|..+..+|+|+|.|.+.
T Consensus 130 ~~~~fD~v~~d~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 130 KYEPFDFIFIDADKQN-----------------NPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp TCCCCSEEEECSCGGG-----------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCcCEEEEcCCcHH-----------------HHHHHHHHHHhcCCCcEEEEe
Confidence 157999999876321 237888999999999976664
No 112
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.64 E-value=0.0092 Score=57.81 Aligned_cols=112 Identities=20% Similarity=0.334 Sum_probs=72.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv~VlhgVDATkL~~~~~L 112 (421)
...+||.||=|+=.++..|+++.+ ..++++.-.|. + +.+ -+++|+..+ ....++++.+ |+.+.-..
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~-~-~l~---~ar~~~~~~~~~~~~~~v~~~~~-D~~~~l~~--- 185 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDE-T-VIE---VSKIYFKNISCGYEDKRVNVFIE-DASKFLEN--- 185 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCH-H-HHH---HHHHHCTTTSGGGGSTTEEEEES-CHHHHHHH---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCH-H-HHH---HHHHHHHhhccccCCCcEEEEEc-cHHHHHhh---
Confidence 457999999999999999998653 45788776663 2 222 244555442 2224555443 66542111
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHH-HHHHHhhHhccCCCCeEEEEecC
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLV-EGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL-~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
...+||.||.|.|+.- +. ...|. ..||+.+..+|+|+|.+.+....
T Consensus 186 ~~~~fDvIi~d~~~p~--~~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 VTNTYDVIIVDSSDPI--GP---------AETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CCSCEEEEEEECCCSS--SG---------GGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCceEEEECCcCCC--Cc---------chhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 1467999999986432 11 12233 68999999999999999887643
No 113
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.60 E-value=0.045 Score=52.49 Aligned_cols=111 Identities=17% Similarity=0.249 Sum_probs=70.0
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeecccCCcCcccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK-----KLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-----~~Gv~VlhgVDATkL~~~~~ 111 (421)
+..+||.||=|+-..++.|+++.+ ...|++.-.|.. +.+ -+++|+..+. ...++|+. -|+.+.-..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~--vi~---~ar~~~~~~~~~~~~~~rv~~~~-~D~~~~l~~-- 153 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAG--VVS---FCRQYLPNHNAGSYDDPRFKLVI-DDGVNFVNQ-- 153 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTT--HHH---HHHHHCHHHHSSCTTCTTCCEEC-SCSCC---C--
T ss_pred CCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHH--HHH---HHHHhhhhcccccccCCceEEEE-ChHHHHHhh--
Confidence 457999999999999999998753 457888777742 222 2445555542 23455554 466553221
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|.|..-. .. .......||+.+..+|+|+|.+.+..
T Consensus 154 -~~~~fDvIi~D~~~p~~--~~--------~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 -TSQTFDVIISDCTDPIG--PG--------ESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCCEEEEEECC--------------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cCCCccEEEECCCCccC--cc--------hhccHHHHHHHHHHhcCCCCEEEEec
Confidence 24789999999875321 10 11113689999999999999988875
No 114
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.57 E-value=0.015 Score=50.01 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=73.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||-||=|+=.++..|++.. ..++++.-.+. .+.+ .++.++.. ..++.++ ..|+.++. +...
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~--~~~v~~~D~s~--~~~~---~a~~~~~~--~~~i~~~-~~d~~~~~----~~~~ 106 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGG--FPNVTSVDYSS--VVVA---AMQACYAH--VPQLRWE-TMDVRKLD----FPSA 106 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTT--CCCEEEEESCH--HHHH---HHHHHTTT--CTTCEEE-ECCTTSCC----SCSS
T ss_pred CCCCeEEEECCCCcHHHHHHHHcC--CCcEEEEeCCH--HHHH---HHHHhccc--CCCcEEE-EcchhcCC----CCCC
Confidence 567899999999989999998763 22677766542 2222 13333322 1245554 45887762 3457
Q ss_pred cccEEEEcCCCCCCC-CCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 116 KFDRIIFNFPHAGFH-GKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~-GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
.||.|+.+.|.-... +..+.-..-..+..-+..+++.+..+|+|+|.+.+.....
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 899999886631100 0000000001244556789999999999999998876543
No 115
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=95.56 E-value=0.0084 Score=56.70 Aligned_cols=110 Identities=20% Similarity=0.293 Sum_probs=71.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv~VlhgVDATkL~~~~~L 112 (421)
+..+||.||=|+=+.+..|+++. ...++++.-.|.. +.+ -+++++..+ ....++|+. -|+.+.-..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~--~i~---~a~~~~~~~~~~~~~~~v~~~~-~D~~~~l~~--- 147 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDET--VIE---VSKIYFKNISCGYEDKRVNVFI-EDASKFLEN--- 147 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHH--HHH---HHHHHCTTTSGGGGSTTEEEEE-SCHHHHHHH---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHH--HHH---HHHHHhHHhccccCCCcEEEEE-CChHHHHHh---
Confidence 45799999999999999999764 3457887777632 222 133343322 223455544 466653211
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHH-HHHHHhhHhccCCCCeEEEEe
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLV-EGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL-~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|.+..-. . ...|. ..||+.+..+|+|+|.+.+..
T Consensus 148 ~~~~fD~Ii~d~~~~~~--~---------~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 148 VTNTYDVIIVDSSDPIG--P---------AETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCSCEEEEEEECCCTTT--G---------GGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCceEEEEcCCCCCC--c---------chhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 14689999998765421 1 12233 689999999999999998774
No 116
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.55 E-value=0.071 Score=48.14 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=66.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++.. .++++.-++ +++.+ .++.++. ++.++ ..|+.++.. ..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s--~~~~~---~a~~~~~-----~~~~~-~~d~~~~~~-----~~ 109 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF---GTVEGLELS--ADMLA---IARRRNP-----DAVLH-HGDMRDFSL-----GR 109 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESC--HHHHH---HHHHHCT-----TSEEE-ECCTTTCCC-----SC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECC--HHHHH---HHHhhCC-----CCEEE-ECChHHCCc-----cC
Confidence 345799999999999999998873 356665443 22222 1222221 55554 457777643 57
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.||.|+.++.-+... .+.+-+..+++.+..+|+|+|.+.|+
T Consensus 110 ~fD~v~~~~~~l~~~----------~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHL----------AGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CEEEEEECTTGGGGS----------CHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CcCEEEEcCchhhhc----------CCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 899999876322210 02234568899999999999999986
No 117
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.54 E-value=0.015 Score=55.88 Aligned_cols=111 Identities=16% Similarity=0.266 Sum_probs=73.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeecccCCc-Cccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK-----KLGASIIHGVDATEM-KEHS 110 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-----~~Gv~VlhgVDATkL-~~~~ 110 (421)
...+||.||=|+=.+++.|+++.+ ..+|++.-.|. ++.+ -+++++..+. ...++++. -|+.+. ..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~~~v~~~~-~D~~~~l~~-- 147 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDG--ELVE---VAKRHMPEWHQGAFDDPRAVLVI-DDARAYLER-- 147 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCH--HHHH---HHHHHCHHHHTTGGGCTTEEEEE-SCHHHHHHH--
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccccCCceEEEE-chHHHHHHh--
Confidence 457999999999999999998753 45777777663 2222 2445555532 23455544 477653 21
Q ss_pred ccccCcccEEEEcCCCCCCC-CCcccHHHHHHhHHH-HHHHHHhhHhccCCCCeEEEEe
Q 014642 111 ELSKRKFDRIIFNFPHAGFH-GKEEDDEVIRMHMSL-VEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~-GkEd~~~~I~~nr~L-L~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|.|+.... +. ...| ...||+.+..+|+|+|.+.+..
T Consensus 148 --~~~~fD~Ii~d~~~~~~~~~~---------~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 148 --TEERYDVVIIDLTDPVGEDNP---------ARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp --CCCCEEEEEEECCCCBSTTCG---------GGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred --cCCCccEEEECCCCcccccCc---------chhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 246799999998863200 10 1112 4689999999999999988864
No 118
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.54 E-value=0.19 Score=48.35 Aligned_cols=139 Identities=19% Similarity=0.144 Sum_probs=89.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
...+.+||=+|=|.=.++..+|...+....|++.-.|. .+.+ .|+.|++...-..+ -+..-|+.++... .
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~--~~i~---~a~~n~~~~g~~~i-~~~~~D~~~~~~~----~ 270 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDE--KRLG---LAREAALASGLSWI-RFLRADARHLPRF----F 270 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCH--HHHH---HHHHHHHHTTCTTC-EEEECCGGGGGGT----C
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCH--HHHH---HHHHHHHHcCCCce-EEEeCChhhCccc----c
Confidence 45677899888888888888887764456787765553 2222 35666554321123 3445688876432 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
..||.||.|-|.--..+. ......|...+++.+.++|+++|.+.+...+. ..+.++.+ .|+...++..
T Consensus 271 ~~~D~Ii~npPyg~r~~~------~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----~~~~~~~~-~g~~~~~~~~ 338 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGR------KEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----ALLKRALP-PGFALRHARV 338 (354)
T ss_dssp CCCSEEEECCCSCC----------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----HHHHHHCC-TTEEEEEEEE
T ss_pred CCCCEEEECCCCcCccCC------cccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----HHHHHHhh-cCcEEEEEEE
Confidence 458999999996432111 12345677889999999999999999875532 12344555 8888887765
Q ss_pred C
Q 014642 195 F 195 (421)
Q Consensus 195 F 195 (421)
+
T Consensus 339 l 339 (354)
T 3tma_A 339 V 339 (354)
T ss_dssp C
T ss_pred E
Confidence 5
No 119
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.50 E-value=0.028 Score=46.69 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=68.2
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
++.+||=+|=|.=.++..|++.. .++++.-.+ +++.+ .++.|+....- .+.++ .-|+.+......-...+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~--~~~~~---~a~~~~~~~~~-~~~~~-~~d~~~~~~~~~~~~~~ 110 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKD--PEAVR---LLKENVRRTGL-GARVV-ALPVEVFLPEAKAQGER 110 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCC--HHHHH---HHHHHHHHHTC-CCEEE-CSCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCC--HHHHH---HHHHHHHHcCC-ceEEE-eccHHHHHHhhhccCCc
Confidence 67899999999999999998863 235555443 33333 35556655432 45443 44666532111111347
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
||.|+.|.|..+ . ..+++..+.+ ..+|+|+|.+.++.....
T Consensus 111 ~D~i~~~~~~~~--~----------~~~~~~~~~~--~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 111 FTVAFMAPPYAM--D----------LAALFGELLA--SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp EEEEEECCCTTS--C----------TTHHHHHHHH--HTCEEEEEEEEEEEETTS
T ss_pred eEEEEECCCCch--h----------HHHHHHHHHh--hcccCCCcEEEEEeCCcc
Confidence 999999988652 1 1123333333 589999999999887654
No 120
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.48 E-value=0.039 Score=46.99 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=66.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++. +.++++.-.+ +...+ .+..++....-.++.+ ...|+.++. + ..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~-~~~d~~~~~----~-~~ 96 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKN--AMSIA---NVERIKSIENLDNLHT-RVVDLNNLT----F-DR 96 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHTCTTEEE-EECCGGGCC----C-CC
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHHhCCCCCcEE-EEcchhhCC----C-CC
Confidence 35679999999999999999986 3467666554 22222 2344443322123333 445777653 2 57
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.||.|+.+.+.--. ..+ -+..+++.+..+|+|+|.+.|.
T Consensus 97 ~~D~v~~~~~l~~~-~~~-----------~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 97 QYDFILSTVVLMFL-EAK-----------TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp CEEEEEEESCGGGS-CGG-----------GHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEEcchhhhC-CHH-----------HHHHHHHHHHHhcCCCeEEEEE
Confidence 89999999653321 111 1356888899999999996654
No 121
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.41 E-value=0.011 Score=55.82 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=69.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----------HhCCCEEEeecccCC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-----------KKLGASIIHGVDATE 105 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-----------r~~Gv~VlhgVDATk 105 (421)
...+||.||=|+=.++..|+++ + ..+|++.-.|.. +.+ -+++|+ .+ ....++|+. -||.+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~--~i~---~ar~~~-~~~~~l~~~~~~~~~~~v~~~~-~D~~~ 145 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDED--VIM---VSKDLI-KIDNGLLEAMLNGKHEKAKLTI-GDGFE 145 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHH--HHH---HHHHHT-CTTTTHHHHHHTTCCSSEEEEE-SCHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHH--HHH---HHHHHH-hhccccccccccCCCCcEEEEE-CchHH
Confidence 4579999999999999999987 4 557887777632 222 133444 22 122355554 36654
Q ss_pred cCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHH-HHHHHHhhHhccCCCCeEEEEe
Q 014642 106 MKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSL-VEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 106 L~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~L-L~~FF~SA~~lL~~~GeIHVTL 167 (421)
.-. . ..+||.||.|.|... +. ...| ...||+.+..+|+|+|.+.+..
T Consensus 146 ~l~---~-~~~fD~Ii~d~~~~~--~~---------~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 146 FIK---N-NRGFDVIIADSTDPV--GP---------AKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HHH---H-CCCEEEEEEECCCCC----------------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred Hhc---c-cCCeeEEEECCCCCC--Cc---------chhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 211 1 467999999998532 11 1112 3689999999999999988874
No 122
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.40 E-value=0.049 Score=50.21 Aligned_cols=123 Identities=15% Similarity=0.169 Sum_probs=82.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~Lk 113 (421)
.+..+||=+|=|.=.++.++++. + + +++|.-.+... + ..++.|+. ..| +.+.. -|+.+. +.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~~-v----~~a~~n~~---~~~~~v~~~~-~d~~~~-----~~ 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPMV-L----PQAEANAK---RNGVRPRFLE-GSLEAA-----LP 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGGG-H----HHHHHHHH---HTTCCCEEEE-SCHHHH-----GG
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHHH-H----HHHHHHHH---HcCCcEEEEE-CChhhc-----Cc
Confidence 45789999999999999988875 3 3 78887776422 1 12444543 334 33332 244331 23
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
...||.|+.|.+.- .+..++..+..+|+|+|.+.++-... ...-.+.++.+++||.+.+..
T Consensus 182 ~~~fD~Vv~n~~~~-----------------~~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 182 FGPFDLLVANLYAE-----------------LHAALAPRYREALVPGGRALLTGILK--DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp GCCEEEEEEECCHH-----------------HHHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEECCcHH-----------------HHHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHHHCCCEEEEEe
Confidence 46899999997531 24678888999999999998864322 234467778888999998764
Q ss_pred e
Q 014642 194 Q 194 (421)
Q Consensus 194 ~ 194 (421)
.
T Consensus 243 ~ 243 (254)
T 2nxc_A 243 A 243 (254)
T ss_dssp E
T ss_pred c
Confidence 3
No 123
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=95.39 E-value=0.017 Score=51.03 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=71.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhC----CCCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeecccCC
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFG----SASNICASSLDSYETVVKKFKEARSNLDTLK-----KLGASIIHGVDATE 105 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~g----s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-----~~Gv~VlhgVDATk 105 (421)
..+..+||-||=|.=.++..|++..+ ...++++.-.+ +++.+ .++.|+..+. ...+.+ ...|+.+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~~-~~~d~~~ 151 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVN---FSLENIKRDKPELLKIDNFKI-IHKNIYQ 151 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGSSTTEEE-EECCGGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHH---HHHHHHHHcCccccccCCEEE-EECChHh
Confidence 45678999999999999999998875 34467776554 33332 3556666543 223444 4457766
Q ss_pred cCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 106 MKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 106 L~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...........||.|+.+.+.-. ++..+..+|+++|.+.++.-.+
T Consensus 152 ~~~~~~~~~~~fD~I~~~~~~~~--------------------~~~~~~~~LkpgG~lv~~~~~~ 196 (227)
T 2pbf_A 152 VNEEEKKELGLFDAIHVGASASE--------------------LPEILVDLLAENGKLIIPIEED 196 (227)
T ss_dssp CCHHHHHHHCCEEEEEECSBBSS--------------------CCHHHHHHEEEEEEEEEEEEET
T ss_pred cccccCccCCCcCEEEECCchHH--------------------HHHHHHHhcCCCcEEEEEEccC
Confidence 42100023467999998876432 2356678999999999998764
No 124
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.37 E-value=0.02 Score=53.62 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=81.9
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
...++.+||=+|=|.=+||+.||+..+ +..++|.-.+ .+..+ .++.|++...-.++. +..-|+.++ ..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s--~~av~---~a~~n~~~n~l~~~~-~~~~d~~~~-~~---- 183 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKN--PTAYH---YLCENIKLNKLNNVI-PILADNRDV-EL---- 183 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECC--HHHHH---HHHHHHHHTTCSSEE-EEESCGGGC-CC----
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCEE-EEECChHHc-Cc----
Confidence 356678999999999999999998864 4467665443 33322 356666543222344 666788877 22
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC--cC-ccc-HHHHHHhCCcEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP--FC-KWH-IEELARKHSLLR 189 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P--Y~-sWn-I~~LAa~aGL~L 189 (421)
...||.||.|.|. + +..++..+..+|+|+|.|+++-..... .. ... +..+++..+..+
T Consensus 184 ~~~~D~Vi~d~p~-~-----------------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (272)
T 3a27_A 184 KDVADRVIMGYVH-K-----------------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKL 245 (272)
T ss_dssp TTCEEEEEECCCS-S-----------------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEE
T ss_pred cCCceEEEECCcc-c-----------------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCee
Confidence 4679999999996 2 124677788899999999988665421 11 122 344555556544
No 125
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.37 E-value=0.31 Score=46.61 Aligned_cols=135 Identities=13% Similarity=0.069 Sum_probs=83.9
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk 113 (421)
+++..+||=||=|.=.++..|++.+. ..+++ ..|- ..+.+ .+..++....-.+ +++ ..-|+.++. +.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~--~~D~-~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~----~~ 255 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDST--ILNL-PGAID---LVNENAAEKGVADRMRG-IAVDIYKES----YP 255 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEE--EEEC-GGGHH---HHHHHHHHTTCTTTEEE-EECCTTTSC----CC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeEE--EEec-HHHHH---HHHHHHHhcCCCCCEEE-EeCccccCC----CC
Confidence 45678999999999999999999873 33454 4565 44433 2444544321112 333 345776652 22
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe-cC--------------------CCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH-KT--------------------TAP 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL-k~--------------------g~P 172 (421)
.+|.|+.++..-.. ..+-...+++.+..+|+|+|.+.|.- .. +..
T Consensus 256 --~~D~v~~~~vlh~~------------~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (359)
T 1x19_A 256 --EADAVLFCRILYSA------------NEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFS 321 (359)
T ss_dssp --CCSEEEEESCGGGS------------CHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCC
T ss_pred --CCCEEEEechhccC------------CHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCc
Confidence 23999997654332 01234678899999999999986653 11 111
Q ss_pred ----cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 ----FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 ----Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
++.=++.++.+++||..++..+.
T Consensus 322 ~~~~~t~~e~~~ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 322 VLGFKEQARYKEILESLGYKDVTMVRK 348 (359)
T ss_dssp CCCCCCGGGHHHHHHHHTCEEEEEEEE
T ss_pred ccCCCCHHHHHHHHHHCCCceEEEEec
Confidence 23335667777888888777654
No 126
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.35 E-value=0.087 Score=48.18 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=69.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~L 112 (421)
...+..+||=||=|.=.+++.||+.++.+..|++.-.+ ++..+ .++.|++.+.-. .+. +..-|+.+.-... -
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~-~~~~d~~~~l~~~-~ 132 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEAD--AHHAQ---VARENLQLAGVDQRVT-LREGPALQSLESL-G 132 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEE-EEESCHHHHHHTC-C
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEE-EEEcCHHHHHHhc-C
Confidence 34567899999999999999999988645567665554 22222 355555543222 233 3445776532111 1
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
....||.|+.+.+... ...||..+..+|+|+|.|.+.
T Consensus 133 ~~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 133 ECPAFDLIFIDADKPN-----------------NPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp SCCCCSEEEECSCGGG-----------------HHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCeEEEEECCchHH-----------------HHHHHHHHHHhcCCCeEEEEe
Confidence 1358999999765221 135889999999999988775
No 127
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.34 E-value=0.21 Score=48.42 Aligned_cols=136 Identities=18% Similarity=0.135 Sum_probs=82.8
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++++. ...+ |.+|- ..+.+ .++.++....-.+-.-+..-|... . +..
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~--~~~D~-~~~~~---~a~~~~~~~~l~~~v~~~~~d~~~--~---~p~ 267 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFP-GLRG--TLLER-PPVAE---EARELLTGRGLADRCEILPGDFFE--T---IPD 267 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEE--EEEEC-HHHHH---HHHHHHHHTTCTTTEEEEECCTTT--C---CCS
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCC-CCeE--EEEcC-HHHHH---HHHHhhhhcCcCCceEEeccCCCC--C---CCC
Confidence 45678999999999999999999863 3344 55666 44443 244444332111112233445541 1 122
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC---------------------CCc
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT---------------------APF 173 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g---------------------~PY 173 (421)
.||.|+.+.-.--+ . ..-...+++.+..+|+|+|.+.|.-... ..+
T Consensus 268 -~~D~v~~~~vlh~~---~---------d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~ 334 (369)
T 3gwz_A 268 -GADVYLIKHVLHDW---D---------DDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAER 334 (369)
T ss_dssp -SCSEEEEESCGGGS---C---------HHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCB
T ss_pred -CceEEEhhhhhccC---C---------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccC
Confidence 79999987654332 1 1112467888899999999988753211 112
Q ss_pred CcccHHHHHHhCCcEEEEEeeC
Q 014642 174 CKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 174 ~sWnI~~LAa~aGL~L~~~~~F 195 (421)
+.=++.++.+++||.+++..+.
T Consensus 335 t~~e~~~ll~~aGf~~~~~~~~ 356 (369)
T 3gwz_A 335 SESEFAALLEKSGLRVERSLPC 356 (369)
T ss_dssp CHHHHHHHHHTTTEEEEEEEEC
T ss_pred CHHHHHHHHHHCCCeEEEEEEC
Confidence 2224567888899999988663
No 128
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.30 E-value=0.029 Score=49.37 Aligned_cols=110 Identities=11% Similarity=0.139 Sum_probs=69.3
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~L 112 (421)
...+..+||=||=|.=.++..|++.++.+..|++.-.+. +..+ .++.|++...-.+ +.+ ..-|+.+.-....-
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~ 134 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDE--KSTA---LAKEYWEKAGLSDKIGL-RLSPAKDTLAELIH 134 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCH--HHHH---HHHHHHHHTTCTTTEEE-EESCHHHHHHHHHT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCH--HHHH---HHHHHHHHCCCCCceEE-EeCCHHHHHHHhhh
Confidence 344677999999999999999999875455676665542 2222 3455554432222 333 33466443211100
Q ss_pred c--cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 S--KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 k--~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
. ...||.|+.+.|... ...+|+.+..+|+|+|.|.+.
T Consensus 135 ~~~~~~fD~v~~~~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 135 AGQAWQYDLIYIDADKAN-----------------TDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp TTCTTCEEEEEECSCGGG-----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCccEEEECCCHHH-----------------HHHHHHHHHHhcCCCcEEEEe
Confidence 1 168999998876221 235888899999999998874
No 129
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=95.30 E-value=0.12 Score=45.42 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++... ++++.-.+ .++.+. ++.++ .++.++ ..|+.++. + ..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s--~~~~~~---a~~~~-----~~~~~~-~~d~~~~~----~-~~ 99 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELS--EDMLTH---ARKRL-----PDATLH-QGDMRDFR----L-GR 99 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESC--HHHHHH---HHHHC-----TTCEEE-ECCTTTCC----C-SS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCC--HHHHHH---HHHhC-----CCCEEE-ECCHHHcc----c-CC
Confidence 4567999999999999999998753 56664332 223221 22221 245544 45777653 2 46
Q ss_pred cccEEEE---cCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 116 KFDRIIF---NFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 116 ~FDrIIF---NFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.||.|+. .+.|+.. ..-+..+++.+..+|+|+|.+.++.
T Consensus 100 ~~D~v~~~~~~~~~~~~-------------~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 100 KFSAVVSMFSSVGYLKT-------------TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CEEEEEECTTGGGGCCS-------------HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEEcCchHhhcCC-------------HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999994 2334421 1234678899999999999998874
No 130
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.29 E-value=0.18 Score=44.76 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=66.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||-+|=|.=.++..|++. +.++++.-.+. + ..+ .++.|+....-..-.....-|+.+.. +...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~-~-~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 157 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVE-E-FYK---TAQKNLKKFNLGKNVKFFNVDFKDAE----VPEG 157 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCH-H-HHH---HHHHHHHHTTCCTTEEEECSCTTTSC----CCTT
T ss_pred CCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCH-H-HHH---HHHHHHHHcCCCCcEEEEEcChhhcc----cCCC
Confidence 46789999999999999999987 44677765542 2 222 24555543311011223344555431 1346
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.||.|+.|.|.. ..+++.+..+|+++|.+.+....
T Consensus 158 ~~D~v~~~~~~~-------------------~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 158 IFHAAFVDVREP-------------------WHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CBSEEEECSSCG-------------------GGGHHHHHHHBCTTCEEEEEESS
T ss_pred cccEEEECCcCH-------------------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 799999987632 24577888999999999998754
No 131
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.27 E-value=0.063 Score=48.91 Aligned_cols=145 Identities=12% Similarity=0.078 Sum_probs=88.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEEeecccCCcCccccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA--SIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv--~VlhgVDATkL~~~~~Lk~ 114 (421)
++.+||=||=|.=.++..||+.. .+.++++.-..... +.+.=..+..+ +++.|. ..+..-|+..+.... .
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~-ml~~A~~A~~~---~~~~~~~~v~~~~~d~~~l~~~~---~ 95 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKEN-LFDISKKIIKK---PSKGGLSNVVFVIAAAESLPFEL---K 95 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGG-GHHHHHHHTSC---GGGTCCSSEEEECCBTTBCCGGG---T
T ss_pred CCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHH-HHHHHHHHHHH---HHHcCCCCeEEEEcCHHHhhhhc---c
Confidence 45689999999999999999764 34456665554333 22210011222 223332 345667888884321 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE--EecCC----------CC--cCcc----
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV--SHKTT----------AP--FCKW---- 176 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV--TLk~g----------~P--Y~sW---- 176 (421)
..+|.|..|||..- .....+.-...+|+.+..+|+|+|.+.| +..+. .| ...|
T Consensus 96 d~v~~i~~~~~~~~---------~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (225)
T 3p2e_A 96 NIADSISILFPWGT---------LLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSE 166 (225)
T ss_dssp TCEEEEEEESCCHH---------HHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSH
T ss_pred CeEEEEEEeCCCcH---------HhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchH
Confidence 67999999998321 0111111124688899999999999998 22221 11 2234
Q ss_pred cHHHHHHhCCcEEEEEeeCCCC
Q 014642 177 HIEELARKHSLLRLDCVQFRKE 198 (421)
Q Consensus 177 nI~~LAa~aGL~L~~~~~F~~~ 198 (421)
++..+.+++||.+.+...|+..
T Consensus 167 el~~~l~~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 167 QYKAELSNSGFRIDDVKELDNE 188 (225)
T ss_dssp HHHHHHHHHTCEEEEEEEECHH
T ss_pred HHHHHHHHcCCCeeeeeecCHH
Confidence 3777888999999999988854
No 132
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.26 E-value=0.34 Score=45.70 Aligned_cols=135 Identities=13% Similarity=0.043 Sum_probs=83.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
+...+||=||=|.=.++..|++.+. . +..|.+|- ..+.+ .+..++....- ..++ ...-|+. .. +.
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~--~~---~p- 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE-D--LSGTVLDL-QGPAS---AAHRRFLDTGLSGRAQ-VVVGSFF--DP---LP- 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-HHHHH---HHHHHHHHTTCTTTEE-EEECCTT--SC---CC-
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC-C--CeEEEecC-HHHHH---HHHHhhhhcCcCcCeE-EecCCCC--CC---CC-
Confidence 4567999999999999999999874 3 33455577 44443 24444433211 1132 2334553 11 11
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC---CC----------------cCc
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT---AP----------------FCK 175 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g---~P----------------Y~s 175 (421)
..||.|+.+.-.--+ . ..-...+++.+..+|+|+|.+.|.-... .| ++.
T Consensus 234 ~~~D~v~~~~vlh~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~ 301 (332)
T 3i53_A 234 AGAGGYVLSAVLHDW---D---------DLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSL 301 (332)
T ss_dssp CSCSEEEEESCGGGS---C---------HHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCH
T ss_pred CCCcEEEEehhhccC---C---------HHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCH
Confidence 279999987643322 1 1113467888889999999998864321 11 222
Q ss_pred ccHHHHHHhCCcEEEEEeeCC
Q 014642 176 WHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 176 WnI~~LAa~aGL~L~~~~~F~ 196 (421)
=++.++.+++||..++..+..
T Consensus 302 ~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 302 AELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp HHHHHHHHHTTEEEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEEECC
Confidence 246678889999999887654
No 133
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=95.22 E-value=0.026 Score=54.25 Aligned_cols=110 Identities=18% Similarity=0.280 Sum_probs=69.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeecccCC-cCcccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGASIIHGVDATE-MKEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv~VlhgVDATk-L~~~~~ 111 (421)
...+||.||=|+=.+++.|+++. ...+|++.-.|. ++.+ -+++|+..+ ....++++.+ ||.+ |..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~--- 164 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDE--DVIQ---VSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ--- 164 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT---
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh---
Confidence 45799999999999999999874 245677766653 2222 244555543 2334565543 6654 221
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|.|..-. .. .......||+.+..+|+|+|.+.+..
T Consensus 165 -~~~~fD~Ii~d~~~~~~--~~--------~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 165 -NQDAFDVIITDSSDPMG--PA--------ESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp -CSSCEEEEEEECC---------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred -CCCCceEEEECCCCCCC--cc--------hhhhHHHHHHHHHhccCCCeEEEEec
Confidence 24679999999885421 10 11123589999999999999988865
No 134
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.21 E-value=0.026 Score=53.23 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=73.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH----hCCCEEEeecccCC-cCcccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK----KLGASIIHGVDATE-MKEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr----~~Gv~VlhgVDATk-L~~~~~ 111 (421)
...+||.||=|+=..+..|+++.+ ...|++--.|. ++.+ -+++|+..+. .-.++|+.+ ||.+ |..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~--~~v~---~ar~~~~~~~~~~~~~rv~v~~~-D~~~~l~~--- 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDG--KVIE---YSKKFLPSIAGKLDDPRVDVQVD-DGFMHIAK--- 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCH--HHHH---HHHHHCHHHHTTTTSTTEEEEES-CSHHHHHT---
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 457999999999999999998753 45777776663 2222 2455665542 234666555 7665 222
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+||.||.|-|.... ... ......||+.+..+|+|+|.+.+..
T Consensus 145 -~~~~fD~Ii~d~~~~~~--~~~--------~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 145 -SENQYDVIMVDSTEPVG--PAV--------NLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp -CCSCEEEEEESCSSCCS--CCC--------CCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred -CCCCeeEEEECCCCCCC--cch--------hhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 14689999999887321 110 0012479999999999999998875
No 135
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.19 E-value=0.2 Score=41.72 Aligned_cols=121 Identities=11% Similarity=0.061 Sum_probs=78.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++ .+.+++++-.+. .+.+ .+..|++...-..+.+ ...|+.+ .+...
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~~~-~~~d~~~-----~~~~~ 99 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLD--GAIE---VTKQNLAKFNIKNCQI-IKGRAED-----VLDKL 99 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSH--HHHH---HHHHHHHHTTCCSEEE-EESCHHH-----HGGGC
T ss_pred CCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCH--HHHH---HHHHHHHHcCCCcEEE-EECCccc-----cccCC
Confidence 4567999999999999999998 345777765552 2222 2444544322112333 3445544 23346
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
.||.|+.+.| . + +..+++.+..+ ++|.+.++... +.....+.++.++.|+.+...
T Consensus 100 ~~D~i~~~~~--~-----~-----------~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 100 EFNKAFIGGT--K-----N-----------IEKIIEILDKK--KINHIVANTIV--LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CCSEEEECSC--S-----C-----------HHHHHHHHHHT--TCCEEEEEESC--HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECCc--c-----c-----------HHHHHHHHhhC--CCCEEEEEecc--cccHHHHHHHHHHcCCeEEEE
Confidence 8999999999 1 1 23566666767 99999998754 335566788888888776654
No 136
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.18 E-value=0.17 Score=48.21 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=82.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk 113 (421)
+++..+||=||=|.=.++..|++.+. . +.++..|- ..+.+ .+..|+....-. .++++ .-|+.+ . +.
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~-~--~~~~~~D~-~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~---~--~~ 247 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP-H--VSATVLEM-AGTVD---TARSYLKDEGLSDRVDVV-EGDFFE---P--LP 247 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-TTHHH---HHHHHHHHTTCTTTEEEE-ECCTTS---C--CS
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC-C--CEEEEecC-HHHHH---HHHHHHHhcCCCCceEEE-eCCCCC---C--CC
Confidence 45678999999999999999998863 3 34445554 33332 244554432211 34443 346643 1 11
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC----C-C-C---------------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT----T-A-P--------------- 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~----g-~-P--------------- 172 (421)
..||.|+.++..--. . ..-...+++.+..+|+|+|.+.|.-.. . . +
T Consensus 248 -~~~D~v~~~~vl~~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (360)
T 1tw3_A 248 -RKADAIILSFVLLNW---P---------DHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGG 314 (360)
T ss_dssp -SCEEEEEEESCGGGS---C---------HHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSC
T ss_pred -CCccEEEEcccccCC---C---------HHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCC
Confidence 239999987753322 0 111246788888999999998876433 1 1 1
Q ss_pred --cCcccHHHHHHhCCcEEEEEeeCC
Q 014642 173 --FCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 173 --Y~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
++.=++.++.+++||.+++..+..
T Consensus 315 ~~~t~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 315 ALRTREKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp CCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHCCCeEEEEEeCC
Confidence 112245567888999988887654
No 137
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=95.15 E-value=0.088 Score=45.35 Aligned_cols=126 Identities=11% Similarity=0.031 Sum_probs=80.9
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc----
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGS-ASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH---- 109 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~---- 109 (421)
..+..+||=||=|.=.++..|++.++. ...|+|.-+.... ...++.++. -|++++...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------------~~~~v~~~~-~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------------PIPNVYFIQ-GEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------------CCTTCEEEE-CCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------------CCCCceEEE-ccccchhhhhhcc
Confidence 345679999999999999999998753 4578887665521 012566554 377665410
Q ss_pred -----------------cccccCcccEEEEcCC-CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 110 -----------------SELSKRKFDRIIFNFP-HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 110 -----------------~~Lk~~~FDrIIFNFP-H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
..+....||.|+.|.+ |.. |.. .........+....++.+..+|+|+|.+.++...+.
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~--g~~--~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI--GNK--IDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCCC--SCH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCC--CCc--ccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 0034468999999974 432 111 112223345677889999999999999999776643
Q ss_pred CcCcccHHHHHH
Q 014642 172 PFCKWHIEELAR 183 (421)
Q Consensus 172 PY~sWnI~~LAa 183 (421)
+.+.+....+
T Consensus 159 --~~~~l~~~l~ 168 (201)
T 2plw_A 159 --QTNNLKTYLK 168 (201)
T ss_dssp --THHHHHHHHH
T ss_pred --CHHHHHHHHH
Confidence 3344444433
No 138
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=95.11 E-value=0.21 Score=46.10 Aligned_cols=109 Identities=17% Similarity=0.113 Sum_probs=71.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASII-HGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vl-hgVDATkL~~~~~L 112 (421)
...+..+||=||=|.=.++..|++.++.+.+++++-++. ..+ + .+..++ +..+..|- ..-|+.++..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~-~~~-~---~a~~~~---~~~~~~v~~~~~d~~~~~~---- 86 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE-TLL-A---EARELF---RLLPYDSEFLEGDATEIEL---- 86 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH-HHH-H---HHHHHH---HSSSSEEEEEESCTTTCCC----
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH-HHH-H---HHHHHH---HhcCCceEEEEcchhhcCc----
Confidence 345678999999999999999999886556787775542 222 1 133332 33443333 3346666432
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
...||.|+.+...--. .+ ...+++.+..+|+|+|.+.+.-.+
T Consensus 87 -~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 -NDKYDIAICHAFLLHM---TT-----------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -SSCEEEEEEESCGGGC---SS-----------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCCeeEEEECChhhcC---CC-----------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 3589999998753321 11 137788888999999999877654
No 139
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.11 E-value=0.096 Score=46.27 Aligned_cols=113 Identities=19% Similarity=0.246 Sum_probs=66.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh--CCCEEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK--LGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~--~Gv~VlhgVDATkL~~~~~Lk 113 (421)
.++.+||=+|=|.=.+++.++... ...|+|.-.+ +++.+ .++.|++...- ..+. +..-|+.++... +.
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~v~-~~~~d~~~~~~~--~~ 121 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELD--KTVAN---QLKKNLQTLKCSSEQAE-VINQSSLDFLKQ--PQ 121 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSC--HHHHH---HHHHHHHHTTCCTTTEE-EECSCHHHHTTS--CC
T ss_pred cCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECC--HHHHH---HHHHHHHHhCCCccceE-EEECCHHHHHHh--hc
Confidence 356799999888888888766542 3456665444 33333 35566654321 1333 344476654321 22
Q ss_pred cCc-ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 114 KRK-FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 114 ~~~-FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
... ||.|+.|.|.. . .+ ...++..+.+ ..+|+|+|.+.++.....
T Consensus 122 ~~~~fD~I~~~~~~~-~---~~-------~~~~l~~~~~--~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F---NL-------AEQAISLLCE--NNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCCSS-S---CH-------HHHHHHHHHH--TTCEEEEEEEEEEEESSS
T ss_pred cCCCCCEEEECCCCC-C---cc-------HHHHHHHHHh--cCccCCCcEEEEEECCCC
Confidence 467 99999999932 1 11 1223333322 568999999999887654
No 140
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.04 E-value=0.066 Score=47.80 Aligned_cols=106 Identities=17% Similarity=0.264 Sum_probs=67.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++. +.++++.-.+ +++.+ .++.++... ...+.++ ..|+.++.. ...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~---~a~~~~~~~-~~~v~~~-~~d~~~~~~-----~~~ 105 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGLDLH--EEMLR---VARRKAKER-NLKIEFL-QGDVLEIAF-----KNE 105 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHT-TCCCEEE-ESCGGGCCC-----CSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHHhc-CCceEEE-ECChhhccc-----CCC
Confidence 4579999999999999999886 3356555443 23332 244444322 1234443 447777542 257
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
||.|+.++...... +..-+..+++.+..+|+|+|.+.++..
T Consensus 106 fD~v~~~~~~~~~~-----------~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMYF-----------DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGGS-----------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcC-----------CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 99999765433211 123356888999999999999988764
No 141
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=94.93 E-value=0.07 Score=47.22 Aligned_cols=111 Identities=16% Similarity=0.183 Sum_probs=65.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
++.+||=+|=|.=.+++.|+... ...|+|.-.+ +++.+ .++.|++...-..++++ .-|+.++.. .....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s--~~~l~---~a~~~~~~~~~~~v~~~-~~D~~~~~~---~~~~~ 122 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMD--RAVSQ---QLIKNLATLKAGNARVV-NSNAMSFLA---QKGTP 122 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSC--HHHHH---HHHHHHHHTTCCSEEEE-CSCHHHHHS---SCCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECC--HHHHH---HHHHHHHHcCCCcEEEE-ECCHHHHHh---hcCCC
Confidence 56799999888888888776552 2356655443 33333 35556554322233433 446655211 12468
Q ss_pred ccEEEEcCC-CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 117 FDRIIFNFP-HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 117 FDrIIFNFP-H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
||.|+.|.| |.+. ...++..+.+ ..+|+|+|.+.|+......
T Consensus 123 fD~V~~~~p~~~~~------------~~~~l~~l~~--~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 123 HNIVFVDPPFRRGL------------LEETINLLED--NGWLADEALIYVESEVENG 165 (202)
T ss_dssp EEEEEECCSSSTTT------------HHHHHHHHHH--TTCEEEEEEEEEEEEGGGC
T ss_pred CCEEEECCCCCCCc------------HHHHHHHHHh--cCccCCCcEEEEEECCCcc
Confidence 999999999 4321 1223333332 3479999999998876543
No 142
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.91 E-value=0.36 Score=42.85 Aligned_cols=125 Identities=12% Similarity=0.041 Sum_probs=81.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++.+||=||=|.=.++..||+. +..|+|.-.+ ++..+ .++.|++.+.-. ++.++ .-|+.+.-. ..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~~~-~~d~~~~~~----~~ 120 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPR--ADRIE---NIQKNIDTYGLSPRMRAV-QGTAPAALA----DL 120 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEE-ESCTTGGGT----TS
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCCEEEE-eCchhhhcc----cC
Confidence 45789999999999999999987 3467665444 23322 355665554322 34443 346665211 12
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
..||.|+.+. +. + .. ++..+..+|+|+|.+.++..+. -+...+.++.++.|+.+.+...
T Consensus 121 ~~~D~v~~~~---~~------------~---~~-~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 121 PLPEAVFIGG---GG------------S---QA-LYDRLWEWLAPGTRIVANAVTL--ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp CCCSEEEECS---CC------------C---HH-HHHHHHHHSCTTCEEEEEECSH--HHHHHHHHHHHHHCSEEEEEEE
T ss_pred CCCCEEEECC---cc------------c---HH-HHHHHHHhcCCCcEEEEEecCc--ccHHHHHHHHHhCCCcEEEEEe
Confidence 4699999775 21 1 23 7888889999999999987653 3445666677777877776543
No 143
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.88 E-value=0.027 Score=55.15 Aligned_cols=113 Identities=16% Similarity=0.260 Sum_probs=73.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCCEEEeecccCCcCcccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv~VlhgVDATkL~~~~~ 111 (421)
....+||.||=|+=.++..|+++.+ ..+|++.-.+. + +.+ -++.|+..+ ....++++. -|+.+.-. .
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~-~-~l~---~Ar~~~~~~~~gl~~~rv~~~~-~D~~~~l~--~ 189 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDK-M-VVD---VSKQFFPDVAIGYEDPRVNLVI-GDGVAFLK--N 189 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCH-H-HHH---HHHHHCHHHHGGGGSTTEEEEE-SCHHHHHH--T
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCH-H-HHH---HHHHHHHhhccccCCCcEEEEE-CCHHHHHH--h
Confidence 3457999999999999999998753 45787776663 2 222 245555544 223455544 46655311 1
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
+....||.||.|.++.-. .. .......||+.+..+|+++|.+.+..
T Consensus 190 ~~~~~fDlIi~d~~~p~~--~~--------~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIG--PA--------KELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp SCTTCEEEEEECCCCTTS--GG--------GGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCccEEEECCCCccC--cc--------hhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 124689999999875321 11 11113689999999999999988764
No 144
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=94.83 E-value=0.1 Score=45.27 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=75.2
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
++.+||=+|=|.=.++..|++. + ..+++|.-.+. ...+ .++.|++...- ++.++ .-|+.++. ..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~-~~~~~-~~d~~~~~-------~~ 112 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDK--EAVD---VLIENLGEFKG-KFKVF-IGDVSEFN-------SR 112 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHTGGGTT-SEEEE-ESCGGGCC-------CC
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHcCC-CEEEE-ECchHHcC-------CC
Confidence 4679999999999999999876 3 33577665542 2222 24444432211 34444 34777652 37
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
||.|+.|.|..-. .. .+...|++.+..+| |.+.+.... .+-..-.+.+++++.|+.+.....++
T Consensus 113 ~D~v~~~~p~~~~-~~-----------~~~~~~l~~~~~~l---~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~ 176 (207)
T 1wy7_A 113 VDIVIMNPPFGSQ-RK-----------HADRPFLLKAFEIS---DVVYSIHLA-KPEVRRFIEKFSWEHGFVVTHRLTTK 176 (207)
T ss_dssp CSEEEECCCCSSS-ST-----------TTTHHHHHHHHHHC---SEEEEEEEC-CHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEEcCCCccc-cC-----------CchHHHHHHHHHhc---CcEEEEEeC-CcCCHHHHHHHHHHCCCeEEEEEEEe
Confidence 9999999995432 11 11235566666676 556554421 22233346667788898776554433
No 145
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=94.81 E-value=0.015 Score=57.26 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=71.5
Q ss_pred eEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcccE
Q 014642 40 QILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDR 119 (421)
Q Consensus 40 rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FDr 119 (421)
+||.||=|+-++++.|++.+. ...|++.-+| .++.+. +++++.....-.++|++ -||.+.-.. +...+||.
T Consensus 92 rVLdIG~G~G~la~~la~~~p-~~~v~~VEid--p~vi~~---Ar~~~~~~~~~rv~v~~-~Da~~~l~~--~~~~~fDv 162 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYP-QSRNTVVELD--AELARL---SREWFDIPRAPRVKIRV-DDARMVAES--FTPASRDV 162 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHST-TCEEEEEESC--HHHHHH---HHHHSCCCCTTTEEEEE-SCHHHHHHT--CCTTCEEE
T ss_pred EEEEEECCcCHHHHHHHHHCC-CcEEEEEECC--HHHHHH---HHHhccccCCCceEEEE-CcHHHHHhh--ccCCCCCE
Confidence 899999999999999999774 4467666555 333321 33333221122355443 466654221 23478999
Q ss_pred EEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 120 IIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 120 IIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
||.|.+...... . ......||+.+..+|+++|.+.+.+.+..
T Consensus 163 Ii~D~~~~~~~~-~---------~L~t~efl~~~~r~LkpgGvlv~~~~~~~ 204 (317)
T 3gjy_A 163 IIRDVFAGAITP-Q---------NFTTVEFFEHCHRGLAPGGLYVANCGDHS 204 (317)
T ss_dssp EEECCSTTSCCC-G---------GGSBHHHHHHHHHHEEEEEEEEEEEEECT
T ss_pred EEECCCCccccc-h---------hhhHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 999965432111 0 11125899999999999999988886543
No 146
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=94.74 E-value=0.19 Score=43.77 Aligned_cols=106 Identities=13% Similarity=0.060 Sum_probs=68.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
-.+..+||-||=|.=.++..|++..+...++++.-.+ +++.+ .++.++..+.-.++.+ ..-|+...- ...
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~~----~~~ 144 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI--PELAE---KAERTLRKLGYDNVIV-IVGDGTLGY----EPL 144 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHTCTTEEE-EESCGGGCC----GGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHcCCCCeEE-EECCcccCC----CCC
Confidence 3457799999999999999999987544567766544 23332 2455555443223333 334553211 124
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
..||.|+.+++.-... ..+..+|+++|.+.++..++
T Consensus 145 ~~fD~v~~~~~~~~~~--------------------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP--------------------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CCEEEEEESSBBSSCC--------------------HHHHHTEEEEEEEEEEESSS
T ss_pred CCeeEEEECCchHHHH--------------------HHHHHHcCCCcEEEEEECCC
Confidence 6799999997644320 25678999999999998765
No 147
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.70 E-value=0.043 Score=48.46 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=69.8
Q ss_pred eccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccc
Q 014642 33 MHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 33 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~ 111 (421)
.......+||=||=|.=.++..|++.++.+.+|++.-.+.. ..+ .++.|++...- ..+.++. -|+.+.-....
T Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~--~~~---~a~~~~~~~g~~~~i~~~~-~d~~~~~~~~~ 138 (229)
T 2avd_A 65 ARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ--PPE---LGRPLWRQAEAEHKIDLRL-KPALETLDELL 138 (229)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH--HHH---HHHHHHHHTTCTTTEEEEE-SCHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH--HHH---HHHHHHHHCCCCCeEEEEE-cCHHHHHHHHH
Confidence 34456789999999999999999998754567877766542 111 24445443211 1233433 35543211110
Q ss_pred ccc--CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 LSK--RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 Lk~--~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
-.. ..||.|+.+.|... ...+|+.+..+|+++|.|.+.
T Consensus 139 ~~~~~~~~D~v~~d~~~~~-----------------~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 139 AAGEAGTFDVAVVDADKEN-----------------CSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HTTCTTCEEEEEECSCSTT-----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCCCCccEEEECCCHHH-----------------HHHHHHHHHHHcCCCeEEEEE
Confidence 011 68999999877221 246888899999999998873
No 148
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.66 E-value=0.32 Score=45.74 Aligned_cols=133 Identities=17% Similarity=0.161 Sum_probs=81.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk 113 (421)
+++ .+||=||=|.=.++..|++.+. ...+++ .|- ..+.+ .++.++....- ..++++. -|+.+ . +.
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~--~D~-~~~~~---~a~~~~~~~~~~~~v~~~~-~d~~~---~--~~ 231 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEP-SARGVM--LDR-EGSLG---VARDNLSSLLAGERVSLVG-GDMLQ---E--VP 231 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEE--EEC-TTCTH---HHHHHTHHHHHTTSEEEEE-SCTTT---C--CC
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEE--eCc-HHHHH---HHHHHHhhcCCCCcEEEec-CCCCC---C--CC
Confidence 455 8999999999999999998873 335554 454 32222 24444443321 2344443 35544 1 12
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC---C-CC-----------------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT---T-AP----------------- 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g-~P----------------- 172 (421)
..||.|+.+...--. . ..-...+++.+..+|+|+|.+.|.-.. . .|
T Consensus 232 -~~~D~v~~~~vl~~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDL---D---------EAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGR 298 (334)
T ss_dssp -SSCSEEEEESCGGGC---C---------HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCC
T ss_pred -CCCCEEEEchhccCC---C---------HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCc
Confidence 569999987654322 0 111257788889999999998887321 1 11
Q ss_pred -cCcccHHHHHHhCCcEEEEEee
Q 014642 173 -FCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 173 -Y~sWnI~~LAa~aGL~L~~~~~ 194 (421)
++.=++.++.+++||..++..+
T Consensus 299 ~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 299 HRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceeEEEE
Confidence 1122445677888998887765
No 149
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.58 E-value=0.037 Score=48.25 Aligned_cols=108 Identities=14% Similarity=0.134 Sum_probs=71.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++.. .++++.-.+ +++.+ .+..++. ..+-.-++..|+.++. ...
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s--~~~~~---~a~~~~~---~~~~~~~~~~d~~~~~-----~~~ 113 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVM--PRAIG---RACQRTK---RWSHISWAATDILQFS-----TAE 113 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESC--HHHHH---HHHHHTT---TCSSEEEEECCTTTCC-----CSC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECC--HHHHH---HHHHhcc---cCCCeEEEEcchhhCC-----CCC
Confidence 345689999999999999999873 356665443 22222 1333322 2333345566887775 247
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
.||.|+.+...--.. +...+..+++.+..+|+|+|.+.|+....
T Consensus 114 ~fD~v~~~~~l~~~~-----------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 114 LFDLIVVAEVLYYLE-----------DMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CEEEEEEESCGGGSS-----------SHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CccEEEEccHHHhCC-----------CHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999985433220 12345678999999999999999976544
No 150
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.53 E-value=0.21 Score=46.29 Aligned_cols=108 Identities=20% Similarity=0.205 Sum_probs=71.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH--hCCCEEEeecccCCcCccc--cc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK--KLGASIIHGVDATEMKEHS--EL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr--~~Gv~VlhgVDATkL~~~~--~L 112 (421)
+..+||=||=|.=.++..|++.+....+++++-.. .+.+ + .++.+++... ..++ -+...|+.++.... .+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s-~~~~-~---~a~~~~~~~~~~~~~v-~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS-ATMI-K---TAEVIKEGSPDTYKNV-SFKISSSDDFKFLGADSV 109 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC-HHHH-H---HHHHHHHHCC-CCTTE-EEEECCTTCCGGGCTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC-HHHH-H---HHHHHHHhccCCCCce-EEEEcCHHhCCccccccc
Confidence 57899999999999999999876446678777554 2222 2 2444544431 1133 34456887765221 11
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..+.||.|+.++..--. + ...+++.+..+|+|+|.+.|
T Consensus 110 ~~~~fD~V~~~~~l~~~----~-----------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF----D-----------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TSSCEEEEEEESCGGGS----C-----------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh----C-----------HHHHHHHHHHhcCCCcEEEE
Confidence 23789999998642221 1 35788999999999999887
No 151
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.46 E-value=0.31 Score=43.20 Aligned_cols=115 Identities=8% Similarity=0.062 Sum_probs=72.0
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccc-
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSE- 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~- 111 (421)
...+..+||=||=|.=..+..||+.++.+..|++.-.+ ++..+ .++.|++.+.-. .+++ ..-|+.+.-....
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~l~~~~~ 128 (221)
T 3u81_A 55 REYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAA---ITQQMLNFAGLQDKVTI-LNGASQDLIPQLKK 128 (221)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEEE-EESCHHHHGGGTTT
T ss_pred HhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHH---HHHHHHHHcCCCCceEE-EECCHHHHHHHHHH
Confidence 34467899999999999999999987545567766554 23322 366676654322 2444 4446655322111
Q ss_pred -cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 112 -LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 112 -Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.....||.|+.+.++... .-...++..+ .+|+|+|.|.+.-..
T Consensus 129 ~~~~~~fD~V~~d~~~~~~--------------~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 129 KYDVDTLDMVFLDHWKDRY--------------LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TSCCCCCSEEEECSCGGGH--------------HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred hcCCCceEEEEEcCCcccc--------------hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 112689999998654321 1123567777 899999998775443
No 152
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.46 E-value=0.26 Score=45.07 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=66.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++ . +.+++++-.. .+ +.+. +..++ .++.+. ..|+.++. + ..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~-~--~~~v~gvD~s-~~-~~~~---a~~~~-----~~~~~~-~~d~~~~~----~-~~ 116 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ-S--GAEVLGTDNA-AT-MIEK---ARQNY-----PHLHFD-VADARNFR----V-DK 116 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH-T--TCEEEEEESC-HH-HHHH---HHHHC-----TTSCEE-ECCTTTCC----C-SS
T ss_pred CCCCEEEEecCCCCHHHHHHHh-C--CCeEEEEECC-HH-HHHH---HHhhC-----CCCEEE-ECChhhCC----c-CC
Confidence 4567999999999999999998 2 3467766543 22 2221 22222 245444 34777654 2 36
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.||.|+.++..--. .+ ...+++.+..+|+|+|.+.++...
T Consensus 117 ~fD~v~~~~~l~~~---~d-----------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 117 PLDAVFSNAMLHWV---KE-----------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp CEEEEEEESCGGGC---SC-----------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CcCEEEEcchhhhC---cC-----------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 89999998754322 11 236788899999999999987654
No 153
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=94.43 E-value=0.092 Score=46.85 Aligned_cols=148 Identities=11% Similarity=0.078 Sum_probs=85.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCH--HHHHHhhhhH---------HHHHHHHHhC------------
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSY--ETVVKKFKEA---------RSNLDTLKKL------------ 93 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~--eeL~~KY~~a---------~~Nl~~Lr~~------------ 93 (421)
+..+||=||=|.=.++..|++.. ..+|+++-+... +.+.++.... ..-+..++..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 45689999999877777777653 236776655321 1111111110 0001111111
Q ss_pred -CCEEEeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 94 -GASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 94 -Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
.+.-+...|++++.....+....||.||.++-.-. +..+..-+..+++.+..+|+|+|.+.++...+..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~----------~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~ 203 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA----------ACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS 203 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh----------hcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc
Confidence 13135567888765322233478999998864221 1112233567888899999999998887643321
Q ss_pred -------------cCcccHHHHHHhCCcEEEEEeeCC
Q 014642 173 -------------FCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 173 -------------Y~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
++.=.+.++.+++||.+++...+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 204 YYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp EEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred eEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 122267788899999999887654
No 154
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.38 E-value=0.054 Score=48.70 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=68.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCccc---
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHS--- 110 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~--- 110 (421)
..+..+||-||=|.=.+++.|++.++.+.+|++.-.+. ++.+ .++.|++...-.+ +.+ ..-|+...-...
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~---~a~~~~~~~g~~~~v~~-~~~d~~~~~~~~~~~ 131 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSE--EWTN---VARKYWKENGLENKIFL-KLGSALETLQVLIDS 131 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCH--HHHH---HHHHHHHHTTCGGGEEE-EESCHHHHHHHHHHC
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCH--HHHH---HHHHHHHHcCCCCCEEE-EECCHHHHHHHHHhh
Confidence 34578999999999999999999876455777765542 2222 2444544321111 333 334654421100
Q ss_pred --------ccc-c-CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 111 --------ELS-K-RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 111 --------~Lk-~-~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.+. . ..||.|+.++. .++ +..+|+.+..+|+++|.|.+.-
T Consensus 132 ~~~~~~~~~f~~~~~~fD~I~~~~~------~~~-----------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 132 KSAPSWASDFAFGPSSIDLFFLDAD------KEN-----------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SSCCGGGTTTCCSTTCEEEEEECSC------GGG-----------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccccccCCCCCcCEEEEeCC------HHH-----------HHHHHHHHHHHcCCCeEEEEEc
Confidence 011 1 68999999843 111 2378899999999999998864
No 155
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.32 E-value=0.11 Score=47.25 Aligned_cols=102 Identities=6% Similarity=0.095 Sum_probs=66.5
Q ss_pred CeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEeecccCCcCcccccccCc
Q 014642 39 HQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL--GASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
.+||=||=|.=..++.||++++.+..|++.-.+ ++..+ .++.|++...-. .++++ .-||.++-.. +....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~g~~~~~i~~~-~gda~~~l~~--~~~~~ 129 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPE--SEHQR---QAKALFREAGYSPSRVRFL-LSRPLDVMSR--LANDS 129 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSC--HHHHH---HHHHHHHHTTCCGGGEEEE-CSCHHHHGGG--SCTTC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCcCcEEEE-EcCHHHHHHH--hcCCC
Confidence 399999999999999999988655567665554 33322 355665543211 23333 3466554221 22478
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
||.|+.+.+... ...||+.+..+|+|||.|.+
T Consensus 130 fD~V~~d~~~~~-----------------~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 130 YQLVFGQVSPMD-----------------LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEEEEECCCTTT-----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred cCeEEEcCcHHH-----------------HHHHHHHHHHHcCCCcEEEE
Confidence 999998753211 23588899999999999887
No 156
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.32 E-value=0.12 Score=49.89 Aligned_cols=105 Identities=18% Similarity=0.153 Sum_probs=70.1
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..++.+||=||=|.=.++..|++. | +..++|.-.+. +.+ .++.|++...- ..+++ ..-|+.++. +.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~---~~~---~a~~~~~~~~~~~~i~~-~~~d~~~~~----~~ 128 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE---ILY---QAMDIIRLNKLEDTITL-IKGKIEEVH----LP 128 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST---HHH---HHHHHHHHTTCTTTEEE-EESCTTTSC----CS
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH---HHH---HHHHHHHHcCCCCcEEE-EEeeHHHhc----CC
Confidence 356789999999998899999886 3 45788877652 332 25555543221 12333 455777652 34
Q ss_pred cCcccEEEEcC-CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEE
Q 014642 114 KRKFDRIIFNF-PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVH 164 (421)
Q Consensus 114 ~~~FDrIIFNF-PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIH 164 (421)
..+||.||.|. ++... +...+..++..+..+|+|+|.+.
T Consensus 129 ~~~~D~Ivs~~~~~~l~------------~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 129 VEKVDVIISEWMGYFLL------------FESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CSCEEEEEECCCBTTBT------------TTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcEEEEEEcCchhhcc------------CHHHHHHHHHHHHhhcCCCcEEE
Confidence 57899999987 44432 22345678888899999999876
No 157
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.30 E-value=0.079 Score=48.57 Aligned_cols=103 Identities=15% Similarity=0.080 Sum_probs=66.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk~~ 115 (421)
+..+||=||=|.=.++..|++. +.++++.-.+ +...+ .++.++. ..|.. -+...|+.++.. ..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s--~~~~~---~a~~~~~---~~~~~~~~~~~d~~~~~~-----~~ 183 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHN--ENSIA---FLNETKE---KENLNISTALYDINAANI-----QE 183 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHH---HTTCCEEEEECCGGGCCC-----CS
T ss_pred CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHH---HcCCceEEEEeccccccc-----cC
Confidence 5679999999999999999987 3366665443 22222 2333433 33432 233456666542 57
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.||.|+.+.+..-. +...+..+++.+..+|+++|.+.|..
T Consensus 184 ~fD~i~~~~~~~~~------------~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFMFL------------NRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGGGS------------CGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEEccchhhC------------CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 89999998754321 11224578899999999999966543
No 158
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.27 E-value=0.19 Score=47.63 Aligned_cols=133 Identities=13% Similarity=0.130 Sum_probs=80.4
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
..+||=||=|.=.++..|++.+. . +..|.+|-. ++.+ .++.++....-.+-.-+..-|+.+... .....|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~~-~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~~ 249 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-Q--LTGQIWDLP-TTRD---AARKTIHAHDLGGRVEFFEKNLLDARN---FEGGAA 249 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-T--CEEEEEECG-GGHH---HHHHHHHHTTCGGGEEEEECCTTCGGG---GTTCCE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-C--CeEEEEECH-HHHH---HHHHHHHhcCCCCceEEEeCCcccCcc---cCCCCc
Confidence 67999999999999999999874 2 344556653 2332 244444332111112334456655431 123559
Q ss_pred cEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC------------------------CCCc
Q 014642 118 DRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT------------------------TAPF 173 (421)
Q Consensus 118 DrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------------------g~PY 173 (421)
|.|+.+.-.--. . ..-...+++.+..+|+|+|.+.|.-.. +..+
T Consensus 250 D~v~~~~vlh~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (352)
T 3mcz_A 250 DVVMLNDCLHYF---D---------AREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELH 317 (352)
T ss_dssp EEEEEESCGGGS---C---------HHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCC
T ss_pred cEEEEecccccC---C---------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcC
Confidence 999997643322 1 111457888899999999998875321 1112
Q ss_pred CcccHHHHHHhCCcEEEEE
Q 014642 174 CKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 174 ~sWnI~~LAa~aGL~L~~~ 192 (421)
+.=++.++.+++||.+++.
T Consensus 318 t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 318 PTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHCCCceeee
Confidence 2224667888999998883
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.22 E-value=0.098 Score=50.71 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=70.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=||=|.=.++..|+++ | ...++|.-.. + +.+ .+..+++...-.+..-+..-|+.++. +...
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s--~-~l~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 132 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS--S-ISD---YAVKIVKANKLDHVVTIIKGKVEEVE----LPVE 132 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS--T-HHH---HHHHHHHHTTCTTTEEEEESCTTTCC----CSSS
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH--H-HHH---HHHHHHHHcCCCCcEEEEECcHHHcc----CCCC
Confidence 45679999999999999999987 3 4578887666 2 222 24444443322232345566777763 3457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVH 164 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIH 164 (421)
+||.||.|.+...... ...+..++..+..+|+|+|.+.
T Consensus 133 ~fD~Iis~~~~~~l~~-----------~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFY-----------ESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp CEEEEEECCCBBTBTB-----------TCCHHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEEEccccccccC-----------chhHHHHHHHHHHhCCCCCEEc
Confidence 8999999976444312 1224577888889999999975
No 160
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.21 E-value=0.13 Score=49.91 Aligned_cols=131 Identities=16% Similarity=0.073 Sum_probs=83.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
...+||=+|=|.=.|+.++++.++...+|+|.-.|.... + -+ .++.+ +.-|+.... ...+
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~--~---~a---------~~~~~-~~~D~~~~~-----~~~~ 98 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL--D---LP---------PWAEG-ILADFLLWE-----PGEA 98 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC--C---CC---------TTEEE-EESCGGGCC-----CSSC
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH--H---hC---------CCCcE-EeCChhhcC-----ccCC
Confidence 456999999999999999998875456888887775321 0 01 23443 344665532 2368
Q ss_pred ccEEEEcCCCCCCCCCcc----cHHHHHH-h----------HHHHHHHHHhhHhccCCCCeEEEEecCCCCc--CcccHH
Q 014642 117 FDRIIFNFPHAGFHGKEE----DDEVIRM-H----------MSLVEGFFRNASGMLRPRGEVHVSHKTTAPF--CKWHIE 179 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd----~~~~I~~-n----------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY--~sWnI~ 179 (421)
||.||.|=|..+...... .....+. . ..+...|++.+..+|+++|.+.+.+.++--. ..=.+.
T Consensus 99 fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr 178 (421)
T 2ih2_A 99 FDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLR 178 (421)
T ss_dssp EEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHH
T ss_pred CCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHH
Confidence 999999999887532100 0011111 1 1256689999999999999998888664110 112466
Q ss_pred HHHHhCCc
Q 014642 180 ELARKHSL 187 (421)
Q Consensus 180 ~LAa~aGL 187 (421)
++..+.++
T Consensus 179 ~~l~~~~~ 186 (421)
T 2ih2_A 179 EFLAREGK 186 (421)
T ss_dssp HHHHHHSE
T ss_pred HHHHhcCC
Confidence 66666776
No 161
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.19 E-value=0.63 Score=45.55 Aligned_cols=107 Identities=16% Similarity=0.261 Sum_probs=69.9
Q ss_pred eccCCCCeEEEEecCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 33 MHYSSKHQILLVGEGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 33 ~~Yss~~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
....+.++||-||=|.-.++..+ |+.. +..|++.-.+ +++.+ .|+.+++.+.-..++++ .-||.++.
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis--~~~l~---~Ar~~~~~~gl~~v~~v-~gDa~~l~---- 185 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIE--PDIAE---LSRKVIEGLGVDGVNVI-TGDETVID---- 185 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESS--HHHHH---HHHHHHHHHTCCSEEEE-ESCGGGGG----
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECC--HHHHH---HHHHHHHhcCCCCeEEE-ECchhhCC----
Confidence 34567899999999998888554 4443 3466666554 33333 36666665432234433 45776652
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...||.|+.+.- .++ ...+|+.+..+|+|||.+.+....+
T Consensus 186 --d~~FDvV~~~a~------~~d-----------~~~~l~el~r~LkPGG~Lvv~~~~~ 225 (298)
T 3fpf_A 186 --GLEFDVLMVAAL------AEP-----------KRRVFRNIHRYVDTETRIIYRTYTG 225 (298)
T ss_dssp --GCCCSEEEECTT------CSC-----------HHHHHHHHHHHCCTTCEEEEEECCG
T ss_pred --CCCcCEEEECCC------ccC-----------HHHHHHHHHHHcCCCcEEEEEcCcc
Confidence 478999987432 111 2478888999999999999986544
No 162
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.08 E-value=0.17 Score=47.98 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=67.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++++||=||=|.=.++..|++..+...++++.-.+. + ..+ .++.|++.+.-.++.++ .-|+.++.. ...
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~-~-~~~---~a~~~~~~~g~~~v~~~-~~d~~~~~~----~~~ 143 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSR-K-ICE---IAKRNVERLGIENVIFV-CGDGYYGVP----EFS 143 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCH-H-HHH---HHHHHHHHTTCCSEEEE-ESCGGGCCG----GGC
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCH-H-HHH---HHHHHHHHcCCCCeEEE-ECChhhccc----cCC
Confidence 4678999999999999999998865334677776652 2 222 35555544322234443 447765421 236
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.||+|+.+.+.-.. . ..+..+|+|+|.+.|...
T Consensus 144 ~fD~Iv~~~~~~~~-~-------------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 144 PYDVIFVTVGVDEV-P-------------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CEEEEEECSBBSCC-C-------------------HHHHHHEEEEEEEEEEBC
T ss_pred CeEEEEEcCCHHHH-H-------------------HHHHHhcCCCcEEEEEEC
Confidence 79999999775543 1 245669999999999853
No 163
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=94.06 E-value=0.79 Score=42.72 Aligned_cols=138 Identities=12% Similarity=0.153 Sum_probs=81.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHH-----HHHHh-----CCCEEEeecccCC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNL-----DTLKK-----LGASIIHGVDATE 105 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl-----~~Lr~-----~Gv~VlhgVDATk 105 (421)
..+.+||=||=|.=.++++|++. + ...|+|+-+-+.+.+. .++.|+ +...- ..+.+. ..|..+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~----~a~~n~~~N~~~~~~~~~~~~~~v~~~-~~~~~~ 150 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILN----SLESNIREHTANSCSSETVKRASPKVV-PYRWGD 150 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHH----HHHHHHHTTCC----------CCCEEE-ECCTTS
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHH----HHHHHHHHhhhhhcccccCCCCCeEEE-EecCCC
Confidence 35679999999998899988875 3 3478888872233332 244555 22110 134443 223222
Q ss_pred cCcccc--cccCcccEEEE-cCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccC---C--CCeEEEEecCCCCc---C
Q 014642 106 MKEHSE--LSKRKFDRIIF-NFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLR---P--RGEVHVSHKTTAPF---C 174 (421)
Q Consensus 106 L~~~~~--Lk~~~FDrIIF-NFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~---~--~GeIHVTLk~g~PY---~ 174 (421)
...... +....||.||. +-+|.- ..+..+++.+..+|+ + +|.+.|......|. .
T Consensus 151 ~~~~~~~~~~~~~fD~Ii~~dvl~~~---------------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~ 215 (281)
T 3bzb_A 151 SPDSLQRCTGLQRFQVVLLADLLSFH---------------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER 215 (281)
T ss_dssp CTHHHHHHHSCSSBSEEEEESCCSCG---------------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------
T ss_pred ccHHHHhhccCCCCCEEEEeCcccCh---------------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh
Confidence 111110 13478999997 433321 114467778888999 9 99998877665442 3
Q ss_pred cccHHHHHHhCC-cEEEEEeeC
Q 014642 175 KWHIEELARKHS-LLRLDCVQF 195 (421)
Q Consensus 175 sWnI~~LAa~aG-L~L~~~~~F 195 (421)
.-.+.+++++.| |.+......
T Consensus 216 ~~~~~~~l~~~G~f~v~~~~~~ 237 (281)
T 3bzb_A 216 DLAFFRLVNADGALIAEPWLSP 237 (281)
T ss_dssp CTHHHHHHHHSTTEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEEeccc
Confidence 456777888999 998877543
No 164
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=94.03 E-value=0.1 Score=56.10 Aligned_cols=151 Identities=16% Similarity=0.068 Sum_probs=90.7
Q ss_pred cccceeeeccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccC
Q 014642 26 KEEEKWIMHYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDAT 104 (421)
Q Consensus 26 ~~~~K~i~~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDAT 104 (421)
..+.+++..+.++.+||=+|=|.=.||+.+++. | +..|+| .|.-+...+ .++.|++...-. .-..+..-|+.
T Consensus 528 r~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~a--VD~s~~al~---~a~~N~~~ngl~~~~v~~i~~D~~ 600 (703)
T 3v97_A 528 RIARRMLGQMSKGKDFLNLFSYTGSATVHAGLG-G-ARSTTT--VDMSRTYLE---WAERNLRLNGLTGRAHRLIQADCL 600 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEESCTTCHHHHHHHHT-T-CSEEEE--EESCHHHHH---HHHHHHHHTTCCSTTEEEEESCHH
T ss_pred HHHHHHHHHhcCCCcEEEeeechhHHHHHHHHC-C-CCEEEE--EeCCHHHHH---HHHHHHHHcCCCccceEEEecCHH
Confidence 345566777778899999999988899998873 2 444555 443233332 366676532211 11234556776
Q ss_pred CcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHh
Q 014642 105 EMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARK 184 (421)
Q Consensus 105 kL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~ 184 (421)
+.-.. ...+||.||.|-|..+. ++.. ..+.........++..|..+|+|+|.+.++.+.....- + .+.-.+
T Consensus 601 ~~l~~---~~~~fD~Ii~DPP~f~~-~~~~--~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~--~-~~~l~~ 671 (703)
T 3v97_A 601 AWLRE---ANEQFDLIFIDPPTFSN-SKRM--EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRM--D-LDGLAK 671 (703)
T ss_dssp HHHHH---CCCCEEEEEECCCSBC----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCC--C-HHHHHH
T ss_pred HHHHh---cCCCccEEEECCccccC-Cccc--hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccccc--C-HHHHHH
Confidence 63111 24689999999998874 2210 01112345567788889999999999998877633211 1 344456
Q ss_pred CCcEEEEE
Q 014642 185 HSLLRLDC 192 (421)
Q Consensus 185 aGL~L~~~ 192 (421)
.|+.+...
T Consensus 672 ~g~~~~~i 679 (703)
T 3v97_A 672 LGLKAQEI 679 (703)
T ss_dssp TTEEEEEC
T ss_pred cCCceeee
Confidence 77765443
No 165
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=94.00 E-value=0.1 Score=50.87 Aligned_cols=127 Identities=11% Similarity=0.128 Sum_probs=82.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEee----cccCCcCcccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHG----VDATEMKEHSE 111 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vlhg----VDATkL~~~~~ 111 (421)
.+..+||=||=|+=.++..|++. +.++++.-.. +.+ ++..++.|..+... .|+..+ .
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s--~~~----------~~~a~~~~~~~~~~~~~~~~~~~l----~ 166 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPS--SGV----------AAKAREKGIRVRTDFFEKATADDV----R 166 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCC--HHH----------HHHHHTTTCCEECSCCSHHHHHHH----H
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCC--HHH----------HHHHHHcCCCcceeeechhhHhhc----c
Confidence 35679999999999999999875 2356655442 222 22334445544331 223222 2
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC------CC-----------cC
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT------AP-----------FC 174 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g------~P-----------Y~ 174 (421)
+....||.|+.++-.--. .| ...||+.+..+|+|+|.+.++.... .. ++
T Consensus 167 ~~~~~fD~I~~~~vl~h~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHI---PY-----------VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp HHHCCEEEEEEESCGGGC---TT-----------HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred cCCCCEEEEEECChHHhc---CC-----------HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 345789999998652221 11 4688999999999999999975431 00 12
Q ss_pred cccHHHHHHhCCcEEEEEeeC
Q 014642 175 KWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 175 sWnI~~LAa~aGL~L~~~~~F 195 (421)
.-.+..+++++||.+++...+
T Consensus 233 ~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEEc
Confidence 226888999999999988775
No 166
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=93.97 E-value=0.14 Score=49.48 Aligned_cols=102 Identities=22% Similarity=0.228 Sum_probs=70.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+.+||=+|=|.=.||+. |+ + +..++|.-.+ .+..+ .++.|++...-.+-..++.-|+.++. .
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s--~~ai~---~a~~n~~~n~l~~~v~~~~~D~~~~~-------~ 257 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDIN--PHAIE---LLKKNIKLNKLEHKIIPILSDVREVD-------V 257 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEESCGGGCC-------C
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEECChHHhc-------C
Confidence 4677999999999999988 77 3 4566665444 22222 35667654332122344556776653 6
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
.||.|+.|-|+.+. .|+..+..+|+++|.+++.-+...
T Consensus 258 ~fD~Vi~dpP~~~~------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 258 KGNRVIMNLPKFAH------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CEEEEEECCTTTGG------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CCcEEEECCcHhHH------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 79999999997751 677788899999999999877654
No 167
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=93.91 E-value=0.16 Score=44.56 Aligned_cols=104 Identities=12% Similarity=0.103 Sum_probs=67.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
....+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .++.|++...-. .+.++ .-|+.++-.. + .
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~~~--~-~ 125 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVE---HARRMLHDNGLIDRVELQ-VGDPLGIAAG--Q-R 125 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHSGGGGEEEE-ESCHHHHHTT--C-C
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHCCCCceEEEE-EecHHHHhcc--C-C
Confidence 456799999999999999999887545567665544 22222 355565543221 23333 3466543211 2 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
. ||.|+.+.+... ...+|+.+..+|+|+|.|.+.
T Consensus 126 ~-fD~v~~~~~~~~-----------------~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 D-IDILFMDCDVFN-----------------GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp S-EEEEEEETTTSC-----------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred C-CCEEEEcCChhh-----------------hHHHHHHHHHhcCCCeEEEEE
Confidence 4 999999854221 246888999999999998773
No 168
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.77 E-value=0.35 Score=46.28 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=81.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++++. ++.+|.+|-.+.+.++ +++...-.+-.-+..-|+. .. +.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p---~~~~~~~D~~~~~~~~------~~~~~~~~~~v~~~~~d~~--~~---~p- 246 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP---GLQGVLLDRAEVVARH------RLDAPDVAGRWKVVEGDFL--RE---VP- 246 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT---TEEEEEEECHHHHTTC------CCCCGGGTTSEEEEECCTT--TC---CC-
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC---CCEEEEecCHHHhhcc------cccccCCCCCeEEEecCCC--CC---CC-
Confidence 45677999999999999999999874 4566777764433211 1110011111223344554 11 12
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC----CC------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT----AP------------------ 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----~P------------------ 172 (421)
.||.|+.++-.--. . ..-...+++.+..+|+|+|.+.|.-... .|
T Consensus 247 -~~D~v~~~~vlh~~---~---------d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~ 313 (348)
T 3lst_A 247 -HADVHVLKRILHNW---G---------DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQE 313 (348)
T ss_dssp -CCSEEEEESCGGGS---C---------HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCC
T ss_pred -CCcEEEEehhccCC---C---------HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcC
Confidence 79999998653222 1 1113467888999999999998854211 11
Q ss_pred cCcccHHHHHHhCCcEEEEEee
Q 014642 173 FCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 173 Y~sWnI~~LAa~aGL~L~~~~~ 194 (421)
++.=++.++.+++||..++..+
T Consensus 314 ~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 314 RTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCceEEEEE
Confidence 1222456788899999998876
No 169
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=93.69 E-value=0.2 Score=44.48 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=79.6
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc-
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L- 112 (421)
.+.++.+||=+|=|.=.+|..|++. +..|+|.-+.... + ..++.++ ..|+++......+
T Consensus 22 ~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~----------~~~v~~~-~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 22 VVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------E----------IAGVRFI-RCDIFKETIFDDID 81 (191)
T ss_dssp CSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------C----------CTTCEEE-ECCTTSSSHHHHHH
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------c----------CCCeEEE-EccccCHHHHHHHH
Confidence 3456889999999999999999987 4578888776421 0 1266654 4588775432111
Q ss_pred ---c---cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 113 ---S---KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 113 ---k---~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
. ..+||.|+-|-|-... |... ........|+...+..|..+|+|+|.+.+.+..+.
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~-g~~~--~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVS-GIPS--RDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCC-SCHH--HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHhhcccCCcceEEecCCCcCCC-CCcc--cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 1 1489999999764432 3221 12233456778889999999999999999998875
No 170
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=93.66 E-value=0.21 Score=45.95 Aligned_cols=110 Identities=7% Similarity=0.013 Sum_probs=69.0
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~L 112 (421)
......+||=||=|.=..++.||+++..+..|++.-.+.. ..+ -++.|++...- ..++++ .-||.+.-....-
T Consensus 76 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~--~~~---~a~~~~~~~g~~~~i~~~-~gda~~~l~~l~~ 149 (247)
T 1sui_A 76 KLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE--NYE---LGLPVIKKAGVDHKIDFR-EGPALPVLDEMIK 149 (247)
T ss_dssp HHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH--HHH---HHHHHHHHTTCGGGEEEE-ESCHHHHHHHHHH
T ss_pred HhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH--HHH---HHHHHHHHcCCCCCeEEE-ECCHHHHHHHHHh
Confidence 3345679999999999999999998754456776665542 221 34555543211 123333 3466543111000
Q ss_pred ---ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 ---SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 ---k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
....||.|+.+.+... ...||+.+..+|+|||.|.+.
T Consensus 150 ~~~~~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 150 DEKNHGSYDFIFVDADKDN-----------------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp SGGGTTCBSEEEECSCSTT-----------------HHHHHHHHHHHBCTTCCEEEE
T ss_pred ccCCCCCEEEEEEcCchHH-----------------HHHHHHHHHHhCCCCeEEEEe
Confidence 1468999999855211 246888899999999999874
No 171
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=93.61 E-value=0.35 Score=42.88 Aligned_cols=106 Identities=15% Similarity=0.136 Sum_probs=68.9
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCC-----CCcEEeccccCHHHHHHhhhhHHHHHHHHH-----hCCCEEEeecccC
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGS-----ASNICASSLDSYETVVKKFKEARSNLDTLK-----KLGASIIHGVDAT 104 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs-----~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-----~~Gv~VlhgVDAT 104 (421)
..++.+||-||=|.=.++..|++..+. ...+++.-.+ +++.+ .++.|+..+. ...+.+. .-|+.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~ 155 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ--AELVR---RSKANLNTDDRSMLDSGQLLIV-EGDGR 155 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESC--HHHHH---HHHHHHHHHHHHHHHHTSEEEE-ESCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcC--HHHHH---HHHHHHHhcCccccCCCceEEE-ECCcc
Confidence 355789999999999999999987642 1356665443 33333 2555655543 3445544 34665
Q ss_pred CcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 105 EMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 105 kL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
+. . .....||+|+.+.+.... ...+..+|+++|.+.+++...
T Consensus 156 ~~--~--~~~~~fD~I~~~~~~~~~--------------------~~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 156 KG--Y--PPNAPYNAIHVGAAAPDT--------------------PTELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp GC--C--GGGCSEEEEEECSCBSSC--------------------CHHHHHTEEEEEEEEEEESCS
T ss_pred cC--C--CcCCCccEEEECCchHHH--------------------HHHHHHHhcCCCEEEEEEecC
Confidence 41 1 123679999998764321 245778999999999998763
No 172
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=93.60 E-value=0.2 Score=46.83 Aligned_cols=110 Identities=17% Similarity=0.260 Sum_probs=69.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGS-ASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk 113 (421)
.++.+||=||=|.=.++++|++.++. +.+|| ..|--+++++ .|+.+++..... .+.++ .-|+.++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~--gvD~s~~ml~---~A~~~~~~~~~~~~v~~~-~~D~~~~~------ 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKII--AIDNSPAMIE---RCRRHIDAYKAPTPVDVI-EGDIRDIA------ 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEE--EEESCHHHHH---HHHHHHHTSCCSSCEEEE-ESCTTTCC------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEE--EEECCHHHHH---HHHHHHHhhccCceEEEe-eccccccc------
Confidence 45789999999999999999998742 33555 4564344443 255555443322 24444 34777653
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
-..||.|+.||=.- + .. ..-...+|+.+..+|+|||.+.|+-..
T Consensus 137 ~~~~d~v~~~~~l~-~--~~---------~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 IENASMVVLNFTLQ-F--LE---------PSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CCSEEEEEEESCGG-G--SC---------HHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccccccceeeeeee-e--cC---------chhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 24599999987311 1 00 001135677888899999998887543
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.58 E-value=0.089 Score=51.62 Aligned_cols=110 Identities=19% Similarity=0.182 Sum_probs=70.9
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
+..++.+||=||=|.=.++..|+++ | +..|+|.-.. +.+ + .++.+++...-.+...+..-|+.++.. .
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s--~~~-~---~a~~~~~~~~~~~~v~~~~~d~~~~~~----~ 127 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT--KMA-D---HARALVKANNLDHIVEVIEGSVEDISL----P 127 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS--TTH-H---HHHHHHHHTTCTTTEEEEESCGGGCCC----S
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH--HHH-H---HHHHHHHHcCCCCeEEEEECchhhcCc----C
Confidence 3456789999999999999999987 3 4478887665 222 2 234444332212223445567776642 2
Q ss_pred cCcccEEEEcC-CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 114 KRKFDRIIFNF-PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 114 ~~~FDrIIFNF-PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.+||.||.|. +|... . ...+..+++.+..+|+|+|.+.++..
T Consensus 128 -~~~D~Iv~~~~~~~l~-~-----------e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLL-R-----------ESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp -SCEEEEEECCCBTTBT-T-----------TCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred -CcceEEEEcChhhccc-c-----------hHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 7899999987 34432 1 12255678888899999998865543
No 174
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=93.48 E-value=0.14 Score=47.96 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=28.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEecccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLD 71 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlD 71 (421)
...+||=||=|+=.++..|++.++ +..|+++-.+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis 79 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDID 79 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCC
Confidence 467999999999999999999985 4578887766
No 175
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=93.48 E-value=0.13 Score=48.45 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=64.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHH----HHHhCCCEEEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLD----TLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~----~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
...+||.||=|+=.+++.|+++ + ..|++.-.|. ++.+. +++++. .+..-.++++.+ ||.+.-
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~--~~i~~---ar~~~~~~~~~~~~~rv~~~~~-D~~~~~----- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADE--KILDS---FISFFPHFHEVKNNKNFTHAKQ-LLDLDI----- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCH--HHHGG---GTTTSTTHHHHHTCTTEEEESS-GGGSCC-----
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCH--HHHHH---HHHHHHhhccccCCCeEEEEec-hHHHHH-----
Confidence 3579999999999999999987 5 5787777763 22221 222222 233335666543 666532
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.+||.||-+.+. . . +||+.+..+|+|+|.+.+..
T Consensus 138 --~~fD~Ii~d~~d-------p----~--------~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 138 --KKYDLIFCLQEP-------D----I--------HRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp --CCEEEEEESSCC-------C----H--------HHHHHHHTTEEEEEEEEEEE
T ss_pred --hhCCEEEECCCC-------h----H--------HHHHHHHHhcCCCcEEEEEc
Confidence 679999998431 0 1 19999999999999988864
No 176
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=93.45 E-value=0.3 Score=42.69 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----HhCCCEEEeecccCCcCccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-----KKLGASIIHGVDATEMKEHS 110 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-----r~~Gv~VlhgVDATkL~~~~ 110 (421)
.+..+||=||=|.=.++..|++..+ ..++++.-.+ .+ +.+ .+..++... ....+.++. -|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s-~~-~~~---~a~~~~~~~~~~~~~~~~v~~~~-~d~~~~~--- 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVS-YR-SLE---IAQERLDRLRLPRNQWERLQLIQ-GALTYQD--- 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESC-HH-HHH---HHHHHHTTCCCCHHHHTTEEEEE-CCTTSCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECC-HH-HHH---HHHHHHHHhcCCcccCcceEEEe-CCccccc---
Confidence 3567999999999999999998653 3467766554 22 222 233333211 011344443 3665433
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.....||.|+.+...--. ...-+..+++.+..+|+|+|.+.++..
T Consensus 98 -~~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 98 -KRFHGYDAATVIEVIEHL------------DLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp -GGGCSCSEEEEESCGGGC------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -ccCCCcCEEeeHHHHHcC------------CHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 234789999988643321 122346788899999999997766654
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=93.44 E-value=0.24 Score=44.75 Aligned_cols=120 Identities=18% Similarity=0.160 Sum_probs=68.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHH-------------------------
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTL------------------------- 90 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L------------------------- 90 (421)
...+||=+|=|.=.|+..|++.. ..+.+|+|+-.+. +.+. .|+.|+...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~-~~l~----~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDP-APLE----LAAKNLALLSPAGLTARELERREQSERFGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCH-HHHH----HHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCH-HHHH----HHHHHHHHhhhccccccchhhhhhhhhcccccch
Confidence 35689999988888999998772 1245687776653 2221 122222211
Q ss_pred -------------HhCC---CEEEeecccCCcCccccc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhh
Q 014642 91 -------------KKLG---ASIIHGVDATEMKEHSEL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNA 153 (421)
Q Consensus 91 -------------r~~G---v~VlhgVDATkL~~~~~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA 153 (421)
...| -..+..-|+.+......+ ....||.|+.|.|.......+. .....++..|++.+
T Consensus 126 ~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~-----~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 126 EAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG-----QVPGQPVAGLLRSL 200 (250)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS-----CCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc-----cccccHHHHHHHHH
Confidence 0111 001344565542110000 2347999999999776421110 01235667899999
Q ss_pred HhccCCCCeEEEE
Q 014642 154 SGMLRPRGEVHVS 166 (421)
Q Consensus 154 ~~lL~~~GeIHVT 166 (421)
..+|+|+|.+.++
T Consensus 201 ~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 201 ASALPAHAVIAVT 213 (250)
T ss_dssp HHHSCTTCEEEEE
T ss_pred HHhcCCCcEEEEe
Confidence 9999999999984
No 178
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.42 E-value=0.31 Score=43.81 Aligned_cols=103 Identities=21% Similarity=0.209 Sum_probs=67.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCc-ccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKE-HSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~-~~~Lk 113 (421)
....+||=||=|.=.++..||+.+. +..|++.-.+ ++..+ .++.|++...-. .+. +..-|+.+.-. . +
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~--~- 139 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERN--ETMIQ---YAKQNLATYHFENQVR-IIEGNALEQFENV--N- 139 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEE-EEESCGGGCHHHH--T-
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEE-EEECCHHHHHHhh--c-
Confidence 4678999999999999999998543 4567665554 22222 355555443211 233 34457765321 1 1
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
...||.|+.+.+... +..||+.+..+|+|+|.|.+
T Consensus 140 ~~~fD~V~~~~~~~~-----------------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 140 DKVYDMIFIDAAKAQ-----------------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TSCEEEEEEETTSSS-----------------HHHHHHHHGGGEEEEEEEEE
T ss_pred cCCccEEEEcCcHHH-----------------HHHHHHHHHHhcCCCeEEEE
Confidence 478999998854221 34689999999999999877
No 179
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=93.41 E-value=0.1 Score=47.41 Aligned_cols=101 Identities=14% Similarity=0.208 Sum_probs=66.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++. +.++++.-.+ +++.+. +..+.. + ++...|+.++. +....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~~---a~~~~~-----~--~~~~~d~~~~~----~~~~~ 114 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPS--KEMLEV---AREKGV-----K--NVVEAKAEDLP----FPSGA 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHHHHH---HHHHTC-----S--CEEECCTTSCC----SCTTC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCC--HHHHHH---HHhhcC-----C--CEEECcHHHCC----CCCCC
Confidence 5679999999999999999876 2366665443 222221 222211 2 25666887764 34578
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
||.|+.+++-... .+ + ...+++.+..+|+|+|.+.++..+
T Consensus 115 fD~v~~~~~~~~~--~~--------~---~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 115 FEAVLALGDVLSY--VE--------N---KDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp EEEEEECSSHHHH--CS--------C---HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEEEEcchhhhc--cc--------c---HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999987542110 00 1 467889999999999999998765
No 180
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.30 E-value=0.48 Score=45.78 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L 112 (421)
....+||=||=|.=.++..|++.+. ++-.|.+|. .++.+ .+..++ ++.|. .-+..-|+.+... .+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~--~~ 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK---EVEVTIVDL-PQQLE---MMRKQT---AGLSGSERIHGHGANLLDRDV--PF 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST---TCEEEEEEC-HHHHH---HHHHHH---TTCTTGGGEEEEECCCCSSSC--CC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC---CCEEEEEeC-HHHHH---HHHHHH---HhcCcccceEEEEccccccCC--CC
Confidence 4567999999999999999999873 345667776 44443 244443 33342 2233446654320 12
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
. ..||.|+.++-.--. . ..-...+++.+...|+|+|.|.|.-
T Consensus 246 p-~~~D~v~~~~vlh~~---~---------~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 246 P-TGFDAVWMSQFLDCF---S---------EEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp C-CCCSEEEEESCSTTS---C---------HHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred C-CCcCEEEEechhhhC---C---------HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 679999997643222 0 1123467888999999999988753
No 181
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=93.30 E-value=0.06 Score=49.48 Aligned_cols=110 Identities=13% Similarity=0.149 Sum_probs=71.0
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~L 112 (421)
...+..+||=||=|.=..++.||+.++.+..|++.-.+.. ....++.|++.+.-. .+++ ..-||.++-....-
T Consensus 57 ~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~-----~~~~a~~~~~~~g~~~~i~~-~~gda~~~l~~~~~ 130 (242)
T 3r3h_A 57 RLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEG-----WTKHAHPYWREAKQEHKIKL-RLGPALDTLHSLLN 130 (242)
T ss_dssp HHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCS-----SCCCSHHHHHHTTCTTTEEE-EESCHHHHHHHHHH
T ss_pred hhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEE-EEcCHHHHHHHHhh
Confidence 3445689999999999999999998764567877766542 123355565543222 2333 33466553211100
Q ss_pred --ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 --SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 --k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
....||.|+.+.++.. ...||+.+..+|+|||.|.+.
T Consensus 131 ~~~~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 131 EGGEHQFDFIFIDADKTN-----------------YLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp HHCSSCEEEEEEESCGGG-----------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCCEeEEEEcCChHH-----------------hHHHHHHHHHhcCCCeEEEEE
Confidence 0368999999876211 234788899999999998883
No 182
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.26 E-value=0.14 Score=46.13 Aligned_cols=108 Identities=17% Similarity=0.157 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
....+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .++.|++...-. .+.++ .-|+...-.......
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~~g~~~~i~~~-~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQD--PNATA---IAKKYWQKAGVAEKISLR-LGPALATLEQLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEEEE-ESCHHHHHHHHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEE-EcCHHHHHHHHHhcC
Confidence 456799999999999999999987544566665444 22222 245555443211 23333 345543211111112
Q ss_pred --CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 --RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 --~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..||.|+.+.+. ++ ...+|..+..+|+|+|.|.+.
T Consensus 145 ~~~~fD~V~~d~~~------~~-----------~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 145 PLPEFDLIFIDADK------RN-----------YPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp SCCCEEEEEECSCG------GG-----------HHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCcCEEEECCCH------HH-----------HHHHHHHHHHHcCCCeEEEEe
Confidence 679999988651 11 246888899999999999884
No 183
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.22 E-value=0.26 Score=42.73 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=64.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..| + ..++++.-.+ +++.+ .+..++ .++.++. .|+.++. +....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s--~~~~~---~a~~~~-----~~~~~~~-~d~~~~~----~~~~~ 95 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPS--EAMLA---VGRRRA-----PEATWVR-AWGEALP----FPGES 95 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCC--HHHHH---HHHHHC-----TTSEEEC-CCTTSCC----SCSSC
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCC--HHHHH---HHHHhC-----CCcEEEE-cccccCC----CCCCc
Confidence 5679999999988888777 2 2256665443 22222 122222 3565544 4777653 34578
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
||.|+.++..--. ++ ...+++.+..+|+|+|.+.|+....
T Consensus 96 fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 96 FDVVLLFTTLEFV---ED-----------VERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEEEEESCTTTC---SC-----------HHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEEEcChhhhc---CC-----------HHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9999998653322 11 2478888999999999999987654
No 184
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=93.12 E-value=0.28 Score=44.82 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=68.3
Q ss_pred CCCeEEEEecCChhHHHHHHHh---hCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQK---FGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~---~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
+..+||=||=|.=..+..||+. .+.+..|+|.-.+..- .+ .++ .+ ..+++++.+ |+.++..-..+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~--l~---~a~----~~-~~~v~~~~g-D~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR--CQ---IPA----SD-MENITLHQG-DCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT--CC---CCG----GG-CTTEEEEEC-CSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH--HH---HHh----cc-CCceEEEEC-cchhHHHHHhhc
Confidence 4579999999999999999987 4445678877665421 11 111 11 235777666 888752111223
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHh-ccCCCCeEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASG-MLRPRGEVHVSH 167 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~-lL~~~GeIHVTL 167 (421)
...||.|+.+..|.. +..+|..+.. +|+++|.+.+.-
T Consensus 150 ~~~fD~I~~d~~~~~-----------------~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNAHAN-----------------TFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESSCSS-----------------HHHHHHHHHHHTCCTTCEEEECS
T ss_pred cCCCCEEEECCchHh-----------------HHHHHHHHHHhhCCCCCEEEEEe
Confidence 347999999887621 2357777885 999999999864
No 185
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.10 E-value=0.17 Score=44.33 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=86.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCcccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~Lk 113 (421)
.++.+||=||=|.=.++..|++.+ .+.++++.-.+. +.+..--..+.. .++..| -..+...|+.++.. .
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~-~~l~~~~~~a~~---~~~~~~~~~v~~~~~d~~~l~~----~ 96 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADK-SRMEKISAKAAA---KPAKGGLPNLLYLWATAERLPP----L 96 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCG-GGGHHHHHHHTS---CGGGTCCTTEEEEECCSTTCCS----C
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCH-HHHHHHHHHHHH---hhhhcCCCceEEEecchhhCCC----C
Confidence 456799999999999999999875 345677665543 211110001111 122233 22344568887653 2
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHH---HHHHHhhHhccCCCCeEEEEecCCC-----------C--cCcc-
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLV---EGFFRNASGMLRPRGEVHVSHKTTA-----------P--FCKW- 176 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL---~~FF~SA~~lL~~~GeIHVTLk~g~-----------P--Y~sW- 176 (421)
... |.|+..+|... .++..+ ..+++.+..+|+|+|.+.++..... | ...|
T Consensus 97 ~~~-d~v~~~~~~~~------------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (218)
T 3mq2_A 97 SGV-GELHVLMPWGS------------LLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSA 163 (218)
T ss_dssp CCE-EEEEEESCCHH------------HHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHH
T ss_pred CCC-CEEEEEccchh------------hhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHH
Confidence 344 88887777432 122233 6788999999999999999864321 1 0111
Q ss_pred --cHHHHHHhCCcEEEEEeeCCCC
Q 014642 177 --HIEELARKHSLLRLDCVQFRKE 198 (421)
Q Consensus 177 --nI~~LAa~aGL~L~~~~~F~~~ 198 (421)
.+..+.+++|+.+.+...++.+
T Consensus 164 ~~~l~~~l~~aGf~i~~~~~~~~~ 187 (218)
T 3mq2_A 164 DEWLAPRYAEAGWKLADCRYLEPE 187 (218)
T ss_dssp HHHHHHHHHHTTEEEEEEEEECHH
T ss_pred HHHHHHHHHHcCCCceeeeccchh
Confidence 2666888999999998777654
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=92.94 E-value=0.46 Score=42.49 Aligned_cols=105 Identities=16% Similarity=0.097 Sum_probs=66.0
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||-||=|.=.++..|++..+ .++++.-.+ +++.+ .++.|+..+.-.++.+ ...|+ ... . ...
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~-~~~-~--~~~ 156 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERI--PELVE---FAKRNLERAGVKNVHV-ILGDG-SKG-F--PPK 156 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESC--HHHHH---HHHHHHHHTTCCSEEE-EESCG-GGC-C--GGG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCC--HHHHH---HHHHHHHHcCCCCcEE-EECCc-ccC-C--CCC
Confidence 35677999999999999999999875 467766544 22222 2555554432223333 33455 111 1 123
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
..||.||.+.+.... ...+..+|+++|.+.|+..++.
T Consensus 157 ~~fD~Ii~~~~~~~~--------------------~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKI--------------------PEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSC--------------------CHHHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHH--------------------HHHHHHhcCCCcEEEEEEecCC
Confidence 469999998764432 0145679999999999987653
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=92.92 E-value=0.22 Score=47.70 Aligned_cols=105 Identities=16% Similarity=0.144 Sum_probs=68.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk~ 114 (421)
.++.+||=||=|.=.+|..|+++ | ...++|.-.+. +.+ .++.+++...-.+ +++ ..-|+.++. +..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s~---~~~---~a~~~~~~~~~~~~i~~-~~~d~~~~~----~~~ 103 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMSS---IIE---MAKELVELNGFSDKITL-LRGKLEDVH----LPF 103 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESST---HHH---HHHHHHHHTTCTTTEEE-EESCTTTSC----CSS
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChHH---HHH---HHHHHHHHcCCCCCEEE-EECchhhcc----CCC
Confidence 45679999999998899988886 3 45788877752 222 2445544322112 344 445776653 334
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVH 164 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIH 164 (421)
.+||.||.+.+..+... ...+..++..+..+|+|+|.+.
T Consensus 104 ~~~D~Ivs~~~~~~l~~-----------~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 104 PKVDIIISEWMGYFLLY-----------ESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBST-----------TCCHHHHHHHHHHHEEEEEEEE
T ss_pred CcccEEEEeCchhhccc-----------HHHHHHHHHHHHhhcCCCeEEE
Confidence 78999999977443211 1224567788889999999986
No 188
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=92.89 E-value=0.14 Score=46.66 Aligned_cols=108 Identities=11% Similarity=0.022 Sum_probs=68.9
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHS 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~ 110 (421)
...+..+||=||=|.=..++.||++++.+..|++.-.+ ++..+ -++.|++. .|. .-+..-||.+.-...
T Consensus 67 ~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~---~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD--REAYE---IGLPFIRK---AGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC--HHHHH---HHHHHHHH---TTCGGGEEEEESCHHHHHHHH
T ss_pred HhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHH---cCCCCcEEEEEcCHHHHHHHH
Confidence 34566799999999999999999987545567766554 22222 35555543 342 223334665432111
Q ss_pred cc---ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 111 EL---SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 111 ~L---k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.- ....||.|+.+.++. ....||+.+..+|+|||.|.+.
T Consensus 139 ~~~~~~~~~fD~I~~d~~~~-----------------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDADKP-----------------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHSTTCTTCEEEEEECSCGG-----------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred HhccCCCCCcCEEEECCchH-----------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 00 146899999874321 1257889999999999998874
No 189
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=92.87 E-value=0.37 Score=40.86 Aligned_cols=111 Identities=12% Similarity=0.139 Sum_probs=64.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++++||.||.|. ...|.-+++.+. +++++ .. .+.+ ...|++++... .+...
T Consensus 11 ~~g~~vL~~~~g~-------------------v~vD~s~~ml~~---a~~~~---~~-~~~~-~~~d~~~~~~~-~~~~~ 62 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-------------------SPVEALKGLVDK---LQALT---GN-EGRV-SVENIKQLLQS-AHKES 62 (176)
T ss_dssp CTTSEEEEEECTT-------------------SCHHHHHHHHHH---HHHHT---TT-TSEE-EEEEGGGGGGG-CCCSS
T ss_pred CCCCEEEEecCCc-------------------eeeeCCHHHHHH---HHHhc---cc-CcEE-EEechhcCccc-cCCCC
Confidence 4678999999985 124433333321 22221 11 3544 34577776421 12457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC----CcCcc---cHHHHHHhCCc
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA----PFCKW---HIEELARKHSL 187 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~----PY~sW---nI~~LAa~aGL 187 (421)
.||.|+.++-..-. .++ +..+++.+..+|+|+|.+.+...... +...+ .+..+.+++||
T Consensus 63 ~fD~V~~~~~l~~~--~~~-----------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 63 SFDIILSGLVPGST--TLH-----------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CEEEEEECCSTTCC--CCC-----------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CEeEEEECChhhhc--ccC-----------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 89999987632211 011 14688889999999999999654221 11122 35567788999
No 190
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.87 E-value=0.49 Score=40.55 Aligned_cols=125 Identities=10% Similarity=0.063 Sum_probs=75.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+..+||=||=|.=.++..|++.. +++|.-.+ +++.+. ..++.++ .-|+.+ .+....
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s--~~~~~~------------~~~~~~~-~~d~~~-----~~~~~~ 78 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLN--IRALES------------HRGGNLV-RADLLC-----SINQES 78 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESC--HHHHHT------------CSSSCEE-ECSTTT-----TBCGGG
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECC--HHHHhc------------ccCCeEE-ECChhh-----hcccCC
Confidence 35699999999999999998764 56665544 222222 2345443 345544 123478
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
||.|+.|.|..-....+. ...-.....++..+++.+ |+|.+.+..... ...-.+.++.+++|+......
T Consensus 79 fD~i~~n~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l-----pgG~l~~~~~~~--~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI-IGGGYLGREVIDRFVDAV-----TVGMLYLLVIEA--NRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp CSEEEECCCCBTTCCCTT-TBCCGGGCHHHHHHHHHC-----CSSEEEEEEEGG--GCHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEECCCCccCCcccc-ccCCcchHHHHHHHHhhC-----CCCEEEEEEecC--CCHHHHHHHHHHCCCcEEEEE
Confidence 999999999764211100 000001234555555544 999998876432 234567778889999877654
No 191
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.85 E-value=0.54 Score=41.00 Aligned_cols=110 Identities=11% Similarity=0.092 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-----HhCCCEEEeecccCCcCccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-----KKLGASIIHGVDATEMKEHS 110 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-----r~~Gv~VlhgVDATkL~~~~ 110 (421)
.+..+||=||=|.=.++..|++..+ ..++++.-.+ +++.+ .+++++... ...++.++ .-|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~--- 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVS--YSVLE---RAKDRLKIDRLPEMQRKRISLF-QSSLVYRD--- 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESC--HHHHH---HHHHHHTGGGSCHHHHTTEEEE-ECCSSSCC---
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECC--HHHHH---HHHHHHHhhccccccCcceEEE-eCcccccc---
Confidence 3567999999999999999998653 3567666554 22222 233333211 11144444 34664432
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.....||.|+.+...--. ...-+..+++.+..+|+|+|.+.++..
T Consensus 98 -~~~~~fD~V~~~~~l~~~------------~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 98 -KRFSGYDAATVIEVIEHL------------DENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp -GGGTTCSEEEEESCGGGC------------CHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred -cccCCCCEEEEHHHHHhC------------CHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 335789999987543221 112256789999999999996666544
No 192
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=92.84 E-value=1.9 Score=38.66 Aligned_cols=150 Identities=11% Similarity=0.112 Sum_probs=80.0
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCC-cCcccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATE-MKEHSELS- 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATk-L~~~~~Lk- 113 (421)
+..+||=+|=|.=.++..|++... +..++|.-.+ +++.+ .|+.|++...-.+ +.++ .-|+.+ +.....-.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s--~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVD--DMCFN---YAKKNVEQNNLSDLIKVV-KVPQKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEE-ECCTTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHHcCCCccEEEE-Ecchhhhhhhhhhccc
Confidence 466999999998888888887753 3466666554 22322 3566665432212 4444 447766 22221111
Q ss_pred cCcccEEEEcCCCCCCCCC-cc-cHHHHHH---h----------------HHHHHHHHHhhHhccCCCCeEEEEecCCCC
Q 014642 114 KRKFDRIIFNFPHAGFHGK-EE-DDEVIRM---H----------------MSLVEGFFRNASGMLRPRGEVHVSHKTTAP 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~Gk-Ed-~~~~I~~---n----------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~P 172 (421)
...||.||.|-|....... .. ..+.+.. . -.++..++..+..+|+++|.++..+-..
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~-- 215 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKK-- 215 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESST--
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCCh--
Confidence 2589999999887653100 00 0001110 0 1223344444556677778776554322
Q ss_pred cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
...=.+.++.+++|+.-++...+
T Consensus 216 ~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 216 CSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp TSHHHHHHHHHHTTCSEEEEEEE
T ss_pred hHHHHHHHHHHHcCCCceEEEEE
Confidence 11124667888899877666544
No 193
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=92.82 E-value=0.75 Score=40.53 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=77.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH------------HhCCCEEEeeccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL------------KKLGASIIHGVDA 103 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L------------r~~Gv~VlhgVDA 103 (421)
.+..+||-||=|.=-++..||+. | ..|+|.-+ |++.+ +. +..+.... ...+++++ .-|+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~-S~~~l-~~---a~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~d~ 91 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAEL-SEAAV-ER---YFTERGEQPHITSQGDFKVYAAPGIEIW-CGDF 91 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEE-CHHHH-HH---HHHHHCSCSEEEEETTEEEEECSSSEEE-EECC
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeC-CHHHH-HH---HHHHccCCcccccccccccccCCccEEE-ECcc
Confidence 35679999999999999999986 3 35555433 33333 22 32221100 01245444 3477
Q ss_pred CCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCe-EEEEecC------CCCcCcc
Q 014642 104 TEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGE-VHVSHKT------TAPFCKW 176 (421)
Q Consensus 104 TkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~Ge-IHVTLk~------g~PY~sW 176 (421)
.++... ....||.|+.++-..-. +......+++.+..+|+|+|. +.+++.- +.|+. +
T Consensus 92 ~~l~~~---~~~~fD~v~~~~~l~~l------------~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~-~ 155 (203)
T 1pjz_A 92 FALTAR---DIGHCAAFYDRAAMIAL------------PADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFS-V 155 (203)
T ss_dssp SSSTHH---HHHSEEEEEEESCGGGS------------CHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCC-C
T ss_pred ccCCcc---cCCCEEEEEECcchhhC------------CHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCC-C
Confidence 776421 12679999976533221 122345788999999999998 5555432 23332 3
Q ss_pred cHHHH---HHhCCcEEEEEeeCC
Q 014642 177 HIEEL---ARKHSLLRLDCVQFR 196 (421)
Q Consensus 177 nI~~L---Aa~aGL~L~~~~~F~ 196 (421)
..+++ .+. |+.+......+
T Consensus 156 ~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 156 PQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp CHHHHHHTSCS-SEEEEEEEESS
T ss_pred CHHHHHHHhcC-CcEEEEecccc
Confidence 33443 333 78776655544
No 194
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.78 E-value=0.52 Score=40.85 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=66.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
..+..+||=||=|.=.++..|++. +.++++.-.+ +++.+ .++.|+..+.-.++. +..-|+.+... ..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~~----~~ 141 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERI--KGLQW---QARRRLKNLDLHNVS-TRHGDGWQGWQ----AR 141 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESC--HHHHH---HHHHHHHHTTCCSEE-EEESCGGGCCG----GG
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecC--HHHHH---HHHHHHHHcCCCceE-EEECCcccCCc----cC
Confidence 356789999999999999999987 3567776555 33332 255555443222233 33446655321 24
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
..||.|+.+.+..... ..+..+|+|+|.+.+++.++
T Consensus 142 ~~~D~i~~~~~~~~~~--------------------~~~~~~L~pgG~lv~~~~~~ 177 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIP--------------------TALMTQLDEGGILVLPVGEE 177 (210)
T ss_dssp CCEEEEEESSBCSSCC--------------------THHHHTEEEEEEEEEEECSS
T ss_pred CCccEEEEccchhhhh--------------------HHHHHhcccCcEEEEEEcCC
Confidence 7899999974332210 03567999999999999873
No 195
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=92.77 E-value=0.28 Score=43.58 Aligned_cols=107 Identities=14% Similarity=0.152 Sum_probs=67.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
...+..+||=||=|.=.++..|++. +.+++++-.+ .++.+ .+..++ .-...++.+ ...|+.++. +.
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~-~~~~~~~~~-~~~d~~~~~----~~ 101 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDAD--AAMLE---VFRQKI-AGVDRKVQV-VQADARAIP----LP 101 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESC--HHHHH---HHHHHT-TTSCTTEEE-EESCTTSCC----SC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECC--HHHHH---HHHHHh-hccCCceEE-EEcccccCC----CC
Confidence 3456789999999999999999876 2467666544 22222 133333 000113333 445776653 34
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
...||.|+.++..--. .+ ...+++.+..+|+|+|.+.++..
T Consensus 102 ~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~ 142 (263)
T 2yqz_A 102 DESVHGVIVVHLWHLV---PD-----------WPKVLAEAIRVLKPGGALLEGWD 142 (263)
T ss_dssp TTCEEEEEEESCGGGC---TT-----------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCeeEEEECCchhhc---CC-----------HHHHHHHHHHHCCCCcEEEEEec
Confidence 5789999998653322 11 24678888999999999998843
No 196
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=92.70 E-value=0.95 Score=41.05 Aligned_cols=125 Identities=17% Similarity=0.226 Sum_probs=79.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.+..+||=||=|.=.++..|++. +.+++++-+.. .+.+ ..++. ++.+ ..-|++++. +..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~--~~~~----------~a~~~~~~~~-~~~d~~~~~----~~~ 92 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSI--VMRQ----------QAVVHPQVEW-FTGYAENLA----LPD 92 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCH--HHHH----------SSCCCTTEEE-ECCCTTSCC----SCT
T ss_pred CCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCH--HHHH----------HHHhccCCEE-EECchhhCC----CCC
Confidence 56789999999999999999972 35677665542 2222 11111 3433 345776653 345
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCC-cCcc-----------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAP-FCKW----------------- 176 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~P-Y~sW----------------- 176 (421)
+.||.|+.++..--. ++ ...+++.+..+|+ +|.+.|.-..... ...|
T Consensus 93 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (261)
T 3ege_A 93 KSVDGVISILAIHHF---SH-----------LEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLP 157 (261)
T ss_dssp TCBSEEEEESCGGGC---SS-----------HHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCC
T ss_pred CCEeEEEEcchHhhc---cC-----------HHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCC
Confidence 789999998753221 11 2478888999999 9977666544211 1222
Q ss_pred ---cHHHHHHhCCcEEEEEeeCC
Q 014642 177 ---HIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 177 ---nI~~LAa~aGL~L~~~~~F~ 196 (421)
.+. +.+++||..++...+.
T Consensus 158 ~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 158 LDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp HHHHHH-HHHHHHCSEEEEEECC
T ss_pred CHHHHH-HHHHcCCCceeEEEec
Confidence 244 7888899887776664
No 197
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=92.61 E-value=0.11 Score=50.67 Aligned_cols=114 Identities=15% Similarity=0.278 Sum_probs=75.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCH-HHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSY-ETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~-eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
+-++||+||=||-+-++.++++. +...|+.--+|.. -++.++|= ..-|-..+..-.++|+++ ||.+.-.. ..+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~l-p~~~~~~~~dpRv~v~~~-Dg~~~l~~---~~~ 156 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYL-PNHNAGSYDDPRFKLVID-DGVNFVNQ---TSQ 156 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHC-HHHHTTGGGCTTEEEEES-CTTTTTSC---SSC
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcC-ccccccccCCCcEEEEec-hHHHHHhh---ccc
Confidence 35699999999999999999875 3557888888732 23334441 111222344556777765 66654332 347
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+||.||-+-+.....+. ...-..||+.|+..|+|+|-+.+-
T Consensus 157 ~yDvIi~D~~dp~~~~~----------~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 157 TFDVIISDCTDPIGPGE----------SLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp CEEEEEESCCCCCCTTC----------CSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred cCCEEEEeCCCcCCCch----------hhcCHHHHHHHHHHhCCCCEEEEe
Confidence 89999999887543221 112358999999999999887654
No 198
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=92.32 E-value=0.49 Score=44.66 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=73.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk~~ 115 (421)
...+||=+|=|.=.++.+|++. ...+++|+-.+ .+.+ + -++.|++.+.-.+ +. ++.-|+.+. +. .
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis-~~al-~---~A~~n~~~~~l~~~v~-~~~~D~~~~-----~~-~ 188 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVS-SKAV-E---IARKNAERHGVSDRFF-VRKGEFLEP-----FK-E 188 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESC-HHHH-H---HHHHHHHHTTCTTSEE-EEESSTTGG-----GG-G
T ss_pred CCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECC-HHHH-H---HHHHHHHHcCCCCceE-EEECcchhh-----cc-c
Confidence 4569999999999999999988 35578776554 3333 2 3666766543222 33 344466552 11 3
Q ss_pred cc---cEEEEcCCCCCCCCCcccHHHHH--HhHHHH-----HHHHHhhH-hccCCCCeEEEEecC
Q 014642 116 KF---DRIIFNFPHAGFHGKEEDDEVIR--MHMSLV-----EGFFRNAS-GMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~F---DrIIFNFPH~G~~GkEd~~~~I~--~nr~LL-----~~FF~SA~-~lL~~~GeIHVTLk~ 169 (421)
+| |.||.|-|..+... .....++ -+..|. ..|++.+. ..|+++|.+.+.+-.
T Consensus 189 ~f~~~D~IvsnPPyi~~~~--~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSA--HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp GTTTCCEEEECCCCBCGGG--SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ccCCCCEEEEcCCCCCccc--ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 68 99999999887411 0000111 011111 26888888 999999999987644
No 199
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.31 E-value=0.52 Score=45.52 Aligned_cols=107 Identities=21% Similarity=0.167 Sum_probs=68.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
++.+||=||=|.=.++..++++ + ...|+|.-... .+ + .++.+++...- ..+++ ..-|+.++. + ..
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~--~~-~---~a~~~~~~~~l~~~v~~-~~~d~~~~~----~-~~ 115 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST--MA-Q---HAEVLVKSNNLTDRIVV-IPGKVEEVS----L-PE 115 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST--HH-H---HHHHHHHHTTCTTTEEE-EESCTTTCC----C-SS
T ss_pred CcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH--HH-H---HHHHHHHHcCCCCcEEE-EEcchhhCC----C-CC
Confidence 5679999999999999999886 3 45788877752 22 2 24445443221 12444 445776653 2 25
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
+||.||.+.+.... ..++ +..+|..+..+|+|+|.+.++..+
T Consensus 116 ~~D~Ivs~~~~~~~-~~~~-----------~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 116 QVDIIISEPMGYML-FNER-----------MLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp CEEEEEECCCBTTB-TTTS-----------HHHHHHHGGGGEEEEEEEESCEEE
T ss_pred ceeEEEEeCchhcC-ChHH-----------HHHHHHHHHhhcCCCeEEEEecCc
Confidence 79999999763321 1111 345566788999999998765433
No 200
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=92.28 E-value=0.96 Score=41.99 Aligned_cols=134 Identities=12% Similarity=0.038 Sum_probs=75.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHH---------HH--------HhCCCEEEe
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLD---------TL--------KKLGASIIH 99 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~---------~L--------r~~Gv~Vlh 99 (421)
+..+||-||=|+=-++..||+. +..||| .|--+++.+. |..... .. ...++.+ .
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~---G~~V~g--vD~S~~~i~~---a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~ 138 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR---GHTVVG--VEISEIGIRE---FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISL-Y 138 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT---TCEEEE--ECSCHHHHHH---HHHHTTCCEEEEECTTSTTCEEEEETTSSEEE-E
T ss_pred CCCeEEEeCCCCcHHHHHHHHC---CCeEEE--EECCHHHHHH---HHHhcccccccccccccccccccccCCCceEE-E
Confidence 5679999999999999999976 335555 4532333332 211110 00 0122333 3
Q ss_pred ecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEE-EEecC------CCC
Q 014642 100 GVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVH-VSHKT------TAP 172 (421)
Q Consensus 100 gVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIH-VTLk~------g~P 172 (421)
.-|+.++... ....||.|+.+.-.... +......+++.+..+|+|||.+. +|+.- |.|
T Consensus 139 ~~D~~~l~~~---~~~~FD~V~~~~~l~~l------------~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~ 203 (252)
T 2gb4_A 139 CCSIFDLPRA---NIGKFDRIWDRGALVAI------------NPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPP 203 (252)
T ss_dssp ESCTTTGGGG---CCCCEEEEEESSSTTTS------------CGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSS
T ss_pred ECccccCCcc---cCCCEEEEEEhhhhhhC------------CHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCC
Confidence 4477776431 12689999976543332 11123578899999999999985 66642 333
Q ss_pred cCcccHHHHHHh--CCcEEEEEeeC
Q 014642 173 FCKWHIEELARK--HSLLRLDCVQF 195 (421)
Q Consensus 173 Y~sWnI~~LAa~--aGL~L~~~~~F 195 (421)
+. +..+++.+. .+|.+.....+
T Consensus 204 ~~-~~~~el~~~l~~~f~v~~~~~~ 227 (252)
T 2gb4_A 204 FY-VPSAELKRLFGTKCSMQCLEEV 227 (252)
T ss_dssp CC-CCHHHHHHHHTTTEEEEEEEEE
T ss_pred CC-CCHHHHHHHhhCCeEEEEEecc
Confidence 32 443433322 24777665433
No 201
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=92.21 E-value=0.78 Score=42.78 Aligned_cols=116 Identities=15% Similarity=0.128 Sum_probs=72.0
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-----C--CCEEEeecccCCcCcc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-----L--GASIIHGVDATEMKEH 109 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-----~--Gv~VlhgVDATkL~~~ 109 (421)
+..+||=||=|.=.++..|++. ....++++-.+ .+ +.+ .+..++..... . .+ -+...|+..+...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s-~~-~l~---~a~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIA-DV-SVK---QCQQRYEDMKNRRDSEYIFSA-EFITADSSKELLI 105 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESC-HH-HHH---HHHHHHHHHHSSSCC-CCCEE-EEEECCTTTSCST
T ss_pred CCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCC-HH-HHH---HHHHHHHHhhhcccccccceE-EEEEecccccchh
Confidence 5679999999988888888874 24567776544 22 222 24444444321 1 22 3345677776422
Q ss_pred ccc--ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 110 SEL--SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 110 ~~L--k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
..+ ....||.|+.++-.--. -.+..-+..+|+.+..+|+|+|.+.++..+.
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~----------~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYS----------FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGG----------GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred hhcccCCCCEEEEEEecchhhc----------cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 123 23589999998742110 0122335689999999999999999987664
No 202
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=91.97 E-value=0.74 Score=40.87 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||=||=|.=.++..|++.+. +.+++++-.+. .+.+ .+..+ ..++.++ ..|+.++. ...
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~--~~~~---~a~~~-----~~~~~~~-~~d~~~~~-----~~~ 94 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDD--DMLE---KAADR-----LPNTNFG-KADLATWK-----PAQ 94 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCH--HHHH---HHHHH-----STTSEEE-ECCTTTCC-----CSS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCH--HHHH---HHHHh-----CCCcEEE-ECChhhcC-----ccC
Confidence 4567999999999999999998873 45777775542 2222 12222 1245443 45777764 246
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
.||.|+.++..--. .+ ...+++.+..+|+|+|.+.++...
T Consensus 95 ~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 95 KADLLYANAVFQWV---PD-----------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp CEEEEEEESCGGGS---TT-----------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred CcCEEEEeCchhhC---CC-----------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 89999998753322 11 246888899999999999998754
No 203
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=91.89 E-value=0.66 Score=40.09 Aligned_cols=117 Identities=15% Similarity=0.165 Sum_probs=68.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
...+||=+|=|.=.|+..|++. + ...+++.-.+. ++.+ .++.|+. ++.++. -|+.++. ..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~-----~~~~~~-~d~~~~~-------~~ 110 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDP--DAIE---TAKRNCG-----GVNFMV-ADVSEIS-------GK 110 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCH--HHHH---HHHHHCT-----TSEEEE-CCGGGCC-------CC
T ss_pred CCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHhcC-----CCEEEE-CcHHHCC-------CC
Confidence 4679999999999999999876 3 33576665542 2222 2444443 565544 4776652 57
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
||.||.|-|..-... .....|++.+..+| |.|.+.... .....+.+++...| .+...
T Consensus 111 ~D~v~~~~p~~~~~~------------~~~~~~l~~~~~~~---g~~~~~~~~---~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 111 YDTWIMNPPFGSVVK------------HSDRAFIDKAFETS---MWIYSIGNA---KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp EEEEEECCCC-------------------CHHHHHHHHHHE---EEEEEEEEG---GGHHHHHHHHHHHE-EEEEE
T ss_pred eeEEEECCCchhccC------------chhHHHHHHHHHhc---CcEEEEEcC---chHHHHHHHHHHCC-CEEEE
Confidence 999999988433210 01135566666666 556666532 22223556667777 54433
No 204
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=91.74 E-value=0.086 Score=47.18 Aligned_cols=109 Identities=16% Similarity=0.174 Sum_probs=68.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk~ 114 (421)
....+||=||=|.=.++..|++.. ..++++ .|-.+++.+. ++.+. +..|..| +..-|+.++.. .+..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~g--vD~s~~~l~~---a~~~~---~~~~~~v~~~~~d~~~~~~--~~~~ 126 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWI--IECNDGVFQR---LRDWA---PRQTHKVIPLKGLWEDVAP--TLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--EEEEEE--EECCHHHHHH---HHHHG---GGCSSEEEEEESCHHHHGG--GSCT
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--CCeEEE--EcCCHHHHHH---HHHHH---HhcCCCeEEEecCHHHhhc--ccCC
Confidence 356799999999999999997642 235665 4533333332 33332 3344433 23456666521 2345
Q ss_pred CcccEEEE-cCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 RKFDRIIF-NFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 ~~FDrIIF-NFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..||.|+. +|+.... ..+......+++.+..+|+|+|.+.+.
T Consensus 127 ~~fD~V~~d~~~~~~~----------~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 127 GHFDGILYDTYPLSEE----------TWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TCEEEEEECCCCCBGG----------GTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CceEEEEECCcccchh----------hhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 78999999 6664110 013445567899999999999998765
No 205
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.46 E-value=0.28 Score=44.38 Aligned_cols=98 Identities=13% Similarity=0.193 Sum_probs=64.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+..+||-||=|.=.++..|++.++ +..+++.-.+ +...+ .+..+. .++.+ ...|+..+. +...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~---~a~~~~-----~~~~~-~~~d~~~~~----~~~~ 147 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVS--KVAIK---AAAKRY-----PQVTF-CVASSHRLP----FSDT 147 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESC--HHHHH---HHHHHC-----TTSEE-EECCTTSCS----BCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCC--HHHHH---HHHHhC-----CCcEE-EEcchhhCC----CCCC
Confidence 4577999999999999999998863 4467776543 22222 122221 13433 344776653 3457
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
.||.|+.++.. .+++.+..+|+|+|.+.+.....
T Consensus 148 ~fD~v~~~~~~---------------------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 148 SMDAIIRIYAP---------------------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CEEEEEEESCC---------------------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ceeEEEEeCCh---------------------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 89999987651 13677888999999998876543
No 206
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=91.45 E-value=2.4 Score=42.35 Aligned_cols=137 Identities=16% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+.+||=+|=|.=.|++.||+. +..++|.-.+ .+ ..+ .|+.|++...-.++. ++.-|+.+.-....+...
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s-~~-al~---~A~~n~~~~~~~~v~-f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGV-PA-LVE---KGQQNARLNGLQNVT-FYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESC-HH-HHH---HHHHHHHHTTCCSEE-EEECCTTSCCSSSGGGTT
T ss_pred CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCC-HH-HHH---HHHHHHHHcCCCceE-EEECCHHHHhhhhhhhcC
Confidence 34678999999988899999876 3467766554 22 222 366666432211333 344577663322223456
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcc-cHHHHHHhCCcEEEEEee
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKW-HIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sW-nI~~LAa~aGL~L~~~~~ 194 (421)
.||.||.|-|-.|. . ...+.|. -+++++-|+|+- + |.... ++. +-.+.|+.+....+
T Consensus 356 ~fD~Vv~dPPr~g~---~------~~~~~l~---------~~~p~~ivyvsc-~--p~tlard~~-~l~~~Gy~~~~~~~ 413 (433)
T 1uwv_A 356 GFDKVLLDPARAGA---A------GVMQQII---------KLEPIRIVYVSC-N--PATLARDSE-ALLKAGYTIARLAM 413 (433)
T ss_dssp CCSEEEECCCTTCC---H------HHHHHHH---------HHCCSEEEEEES-C--HHHHHHHHH-HHHHTTCEEEEEEE
T ss_pred CCCEEEECCCCccH---H------HHHHHHH---------hcCCCeEEEEEC-C--hHHHHhhHH-HHHHCCcEEEEEEE
Confidence 89999999999984 1 1112222 156666666653 2 22111 222 22457999999999
Q ss_pred CCCCCCCCCcc
Q 014642 195 FRKEDYPGYSN 205 (421)
Q Consensus 195 F~~~~YPGY~h 205 (421)
|| .||.=.|
T Consensus 414 ~d--~Fp~t~H 422 (433)
T 1uwv_A 414 LD--MFPHTGH 422 (433)
T ss_dssp EC--CSTTSSC
T ss_pred ec--cCCCCCe
Confidence 87 5774433
No 207
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=91.04 E-value=0.53 Score=41.78 Aligned_cols=111 Identities=12% Similarity=0.053 Sum_probs=68.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
+..++.+||=||=|.=.++..|++... ++++.-.+ +.+.+. +..++ ...++.+ ...|+.++.....+.
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s--~~~~~~---a~~~~---~~~~~~~-~~~d~~~~~~~~~~~ 120 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVS--KSALEI---AAKEN---TAANISY-RLLDGLVPEQAAQIH 120 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESC--HHHHHH---HHHHS---CCTTEEE-EECCTTCHHHHHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECC--HHHHHH---HHHhC---cccCceE-EECcccccccccccc
Confidence 345678999999999999999998753 67776544 222221 22222 1223443 345777764332221
Q ss_pred -cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 114 -KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 114 -~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
...||.|+.+.-+.-. ..+ -...+++.+..+|+|+|.+.|.-.
T Consensus 121 ~~~~~d~v~~~~~~~~~-~~~-----------~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 121 SEIGDANIYMRTGFHHI-PVE-----------KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHCSCEEEEESSSTTS-CGG-----------GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cccCccEEEEcchhhcC-CHH-----------HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2359999998654432 111 135788888999999999776654
No 208
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=90.95 E-value=0.74 Score=40.48 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=64.3
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk 113 (421)
..+..+||=||=|.=.++..|++.. .++++.-.+ +++.+ .+..++ +.. ++.++ ..|+.+.. ..
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~--~~~~~---~a~~~~---~~~~~v~~~-~~d~~~~~----~~ 131 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEIN--EKMYN---YASKLL---SYYNNIKLI-LGDGTLGY----EE 131 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESC--HHHHH---HHHHHH---TTCSSEEEE-ESCGGGCC----GG
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCC--HHHHH---HHHHHH---hhcCCeEEE-ECCccccc----cc
Confidence 3567799999999999999999874 467776554 22222 233333 333 34443 34665521 12
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...||.|+.+.+.-.. . ..+..+|+++|.+.++..+.
T Consensus 132 ~~~fD~v~~~~~~~~~---~-----------------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTL---L-----------------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GCCEEEEEESSBBSSC---C-----------------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHH---H-----------------HHHHHHcCCCcEEEEEEcCC
Confidence 4689999999764332 0 13667999999999997654
No 209
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=90.74 E-value=0.11 Score=52.81 Aligned_cols=119 Identities=15% Similarity=0.201 Sum_probs=68.7
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCH-HHHHHhh-hhH-HHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSY-ETVVKKF-KEA-RSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~-eeL~~KY-~~a-~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++||++|=||-+-++.++++. ...|++--+|.. -++.++| |.. ....+..+.-.++|+++ ||-+--+...-..
T Consensus 206 pkrVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~-Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIE-DCIPVLKRYAKEG 282 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEES-CHHHHHHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehH-HHHHHHHhhhhcc
Confidence 4699999999999999998853 367877777732 2333444 211 11111122223455543 5543221111134
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHH-hHHHHHHHHHhhHhccCCCCeEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRM-HMSLVEGFFRNASGMLRPRGEVH 164 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~-nr~LL~~FF~SA~~lL~~~GeIH 164 (421)
++||.||-+.+.....+. .... ....-..||+.|+..|+++|-+.
T Consensus 283 ~~yDvIIvDl~D~~~s~~-----p~g~a~~Lft~eFy~~~~~~L~p~GVlv 328 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTS-----PEEDSTWEFLRLILDLSMKVLKQDGKYF 328 (381)
T ss_dssp CCEEEEEEECCSSCCCCC---------CHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CceeEEEECCCCCcccCc-----ccCcchHHHHHHHHHHHHHhcCCCCEEE
Confidence 689999999776432110 0112 23446799999999999998653
No 210
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=90.65 E-value=0.9 Score=40.30 Aligned_cols=118 Identities=13% Similarity=0.073 Sum_probs=76.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccC-CcCcccccc-
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDAT-EMKEHSELS- 113 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDAT-kL~~~~~Lk- 113 (421)
.+..+||=||=|.=.++..|++. +..++++-.+ ..+.+ .+..+ ..++.++ ..|+. .+ .+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~-----~~~~~~~-~~d~~~~~----~~~~ 108 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFS--PELLK---LARAN-----APHADVY-EWNGKGEL----PAGL 108 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESC--HHHHH---HHHHH-----CTTSEEE-ECCSCSSC----CTTC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHh-----CCCceEE-Ecchhhcc----CCcC
Confidence 45789999999999999999987 3467776554 22222 12223 2245443 34653 22 233
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
...||.|+.|.. ...+++.+..+|+|+|.+... +...+.-.+..+.+++|+......
T Consensus 109 ~~~fD~v~~~~~--------------------~~~~l~~~~~~LkpgG~l~~~---~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 109 GAPFGLIVSRRG--------------------PTSVILRLPELAAPDAHFLYV---GPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp CCCEEEEEEESC--------------------CSGGGGGHHHHEEEEEEEEEE---ESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEeCCC--------------------HHHHHHHHHHHcCCCcEEEEe---CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 578999999821 125677888999999998821 112344467788889999877654
Q ss_pred e
Q 014642 194 Q 194 (421)
Q Consensus 194 ~ 194 (421)
.
T Consensus 166 ~ 166 (226)
T 3m33_A 166 H 166 (226)
T ss_dssp E
T ss_pred e
Confidence 3
No 211
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=90.57 E-value=0.73 Score=44.43 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=65.1
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++.+. ++.++.+|- ..+.+. +.. + .+++++. -|+.+ . +.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~---~~~~~~~D~-~~~~~~---a~~----~--~~v~~~~-~d~~~-~----~~- 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYP---LIKGINFDL-PQVIEN---APP----L--SGIEHVG-GDMFA-S----VP- 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTT---CCC----C--TTEEEEE-CCTTT-C----CC-
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCC---CCeEEEeCh-HHHHHh---hhh----c--CCCEEEe-CCccc-C----CC-
Confidence 45678999999999999999999863 456677786 444432 111 1 2444443 36654 1 22
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
. ||.|+.++-.--. . ..-...+++.+..+|+|+|.+.|.
T Consensus 267 ~-~D~v~~~~~lh~~---~---------d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 267 Q-GDAMILKAVCHNW---S---------DEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp C-EEEEEEESSGGGS---C---------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCEEEEecccccC---C---------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 9999998653221 1 111347788899999999998876
No 212
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=90.49 E-value=0.81 Score=43.42 Aligned_cols=109 Identities=9% Similarity=0.087 Sum_probs=66.8
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~Lk 113 (421)
-.++.+||=||=|.=.++..|++. +..|+|.-.+ +.+.+ .+++|+.. . ...+|+.++... ....
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S--~~ml~---~Ar~~~~~---~----~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER---GASVTVFDFS--QRMCD---DLAEALAD---R----CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHTSS---S----CCEEEECCTTSCCCGGG
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHHHHh---c----cceeeeeeccccccccc
Confidence 345789999999999999999986 2467765443 33332 23333321 1 234555554330 0111
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
...||.|+.|+..--. . ..-+...++....+| |+|.+.++.+.+.
T Consensus 108 ~~~fD~Vv~~~~l~~~-~-----------~~~~~~~l~~l~~lL-PGG~l~lS~~~g~ 152 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRF-T-----------TEEARRACLGMLSLV-GSGTVRASVKLGF 152 (261)
T ss_dssp TTCCSEEEEESCGGGS-C-----------HHHHHHHHHHHHHHH-TTSEEEEEEEBSC
T ss_pred CCCccEEEEhhhhHhC-C-----------HHHHHHHHHHHHHhC-cCcEEEEEeccCc
Confidence 4689999998652211 0 112345677777889 9999999998764
No 213
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=90.10 E-value=0.15 Score=51.29 Aligned_cols=119 Identities=12% Similarity=0.165 Sum_probs=69.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh--------CCCEEEeecccCCcCc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK--------LGASIIHGVDATEMKE 108 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~--------~Gv~VlhgVDATkL~~ 108 (421)
...+||.+|=|+-.+++.++++. +..|++--.| +++.+ -+++|+..+.. -.++|+++ ||.+.-.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID--~~vie---~Ar~~~~~l~~~~l~dp~~~rv~vi~~-Da~~~L~ 259 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEID--QMVID---GCKKYMRKTCGDVLDNLKGDCYQVLIE-DCIPVLK 259 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESC--HHHHH---HHHHHCCC----CCSSSEETTEEEEES-CHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECC--HHHHH---HHHHHHHHhccccccccCCCcEEEEEC-cHHHHHH
Confidence 35799999999999999998763 3567766555 23332 24455443321 14666655 7776432
Q ss_pred ccccccCcccEEEEcCCC--CCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 109 HSELSKRKFDRIIFNFPH--AGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH--~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
...-...+||.||-+-|. .|. +.. .. .-++.+...++.|..+|+|+|-+.+-.+.
T Consensus 260 ~~~~~~~~fDvII~D~~d~P~~~-~p~----~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 260 RYAKEGREFDYVINDLTAVPIST-SPE----ED-STWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCC-C---------CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred hhhccCCCceEEEECCCCcccCc-Cch----hh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 110024789999999986 231 110 00 11233333333348999999988776544
No 214
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=90.04 E-value=0.22 Score=50.10 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=76.7
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCc-cccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKE-HSELSK 114 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~-~~~Lk~ 114 (421)
+.+||=++=|.=.||+-+|+..+.+..|+|--.+ .+.. ..+++|++...-.+ +. +..-||.++-. .. .
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~--~~av---~~~~~N~~~Ngl~~~~v~-v~~~Da~~~l~~~~---~ 123 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDIS--SKAI---EIMKENFKLNNIPEDRYE-IHGMEANFFLRKEW---G 123 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSC--HHHH---HHHHHHHHHTTCCGGGEE-EECSCHHHHHHSCC---S
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECC--HHHH---HHHHHHHHHhCCCCceEE-EEeCCHHHHHHHhh---C
Confidence 5789888888888888888765323456665554 2222 24677776543222 44 44558776532 21 3
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLL 188 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~ 188 (421)
..||+|+.| | .|. ...|+..|.++|+++|-|++|..+..+.+.+.+...-++.|..
T Consensus 124 ~~fD~V~lD-P-~g~----------------~~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~~~~~rkYg~~ 179 (392)
T 3axs_A 124 FGFDYVDLD-P-FGT----------------PVPFIESVALSMKRGGILSLTATDTAPLSGTYPKTCMRRYMAR 179 (392)
T ss_dssp SCEEEEEEC-C-SSC----------------CHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSB
T ss_pred CCCcEEEEC-C-CcC----------------HHHHHHHHHHHhCCCCEEEEEecchhhhccccHHHHHHHhCCc
Confidence 579999999 5 231 1258889999999999999998665433333344443444433
No 215
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=89.72 E-value=0.82 Score=42.27 Aligned_cols=116 Identities=13% Similarity=0.145 Sum_probs=64.2
Q ss_pred CCCeEEEEecCChhHHHHHHHhh---CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEE-eecccCCcCcc--
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF---GSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASII-HGVDATEMKEH-- 109 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~---gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~Vl-hgVDATkL~~~-- 109 (421)
+..+||=||=|.=.++..|++.+ .....+..|..|.-+++.+. ++..+...... ++.+. ...|+..+...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~---a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAK---YKELVAKTSNLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHH---HHHHHHTCSSCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHH---HHHHHHhccCCCcceEEEEecchhhhhhhhc
Confidence 35699999988877776554332 12334445777755555543 33333211111 22322 23344333210
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
..+....||.|+.++=.--. +| +..+++.+..+|+|||.+.|....
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~---~d-----------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYV---KD-----------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGC---SC-----------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCceeEEEEeeeeeec---CC-----------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 01235789999988533221 11 246788888999999999987644
No 216
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=89.71 E-value=0.77 Score=44.35 Aligned_cols=127 Identities=14% Similarity=0.095 Sum_probs=79.1
Q ss_pred cCCCCeEEEEecC------ChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc
Q 014642 35 YSSKHQILLVGEG------DFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE 108 (421)
Q Consensus 35 Yss~~rILLVGEG------DFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~ 108 (421)
..++.+||=+|=| .=| ..+++..+....|+|.-+... + .++++...-|++++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-----~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-----SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-----CSSSEEEESCGGGCCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-----CCCEEEEECccccCCc
Confidence 4567899999993 244 334555553457888766554 1 2566613347776542
Q ss_pred ccccccCcccEEEEcCCCC--CCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCC
Q 014642 109 HSELSKRKFDRIIFNFPHA--GFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHS 186 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~--G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aG 186 (421)
...||.|+-|.++. |... .+. .....++...++.+..+|+|+|.+.+....+... -.+.++.++.|
T Consensus 121 -----~~~fD~Vvsn~~~~~~g~~~-~d~----~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~~G 188 (290)
T 2xyq_A 121 -----ANKWDLIISDMYDPRTKHVT-KEN----DSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFS 188 (290)
T ss_dssp -----SSCEEEEEECCCCCC---CC-SCC----CCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEE
T ss_pred -----cCcccEEEEcCCcccccccc-ccc----cchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHHcC
Confidence 26799999996532 2211 110 1123456788999999999999999977665322 26667777777
Q ss_pred cEEEEEe
Q 014642 187 LLRLDCV 193 (421)
Q Consensus 187 L~L~~~~ 193 (421)
+.-++..
T Consensus 189 F~~v~~~ 195 (290)
T 2xyq_A 189 WWTAFVT 195 (290)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 7655544
No 217
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=89.33 E-value=3.6 Score=37.68 Aligned_cols=147 Identities=10% Similarity=0.123 Sum_probs=82.0
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHH---Hhhh---------hHHHHHHHHHhCC----------
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVV---KKFK---------EARSNLDTLKKLG---------- 94 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~---~KY~---------~a~~Nl~~Lr~~G---------- 94 (421)
+..+||=||=|.=.++..+++.. +.+|+++-+. .+.+. ++.. ....|+..++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFL-EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSC-HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCC-HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 45799999988766544344432 3478777663 33332 1111 0113444443211
Q ss_pred ---CEEEeecccCC-cCcc-cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 95 ---ASIIHGVDATE-MKEH-SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 95 ---v~VlhgVDATk-L~~~-~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
+.-+...|+++ +... ..+....||.|+.|+-.-. +...-.=+..+|+.+..+|+|||.+.++-..
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~----------~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA----------VSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh----------hcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 12233457776 3211 1233467999999973211 0000122457889999999999998886311
Q ss_pred C-------------CCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 170 T-------------APFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 170 g-------------~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
. .+++.=.+.++.+++||.+++...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 218 EESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp SCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 1 11233356678889999998887654
No 218
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=89.07 E-value=2.9 Score=40.36 Aligned_cols=135 Identities=12% Similarity=0.068 Sum_probs=80.8
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
.++...+||=||=|.=.++.+|++++. ++.+|.+|..+.+. .++.++..--.-+++++- -|.-+ . .
T Consensus 176 ~~~~~~~v~DvGgG~G~~~~~l~~~~p---~~~~~~~dlp~v~~----~a~~~~~~~~~~rv~~~~-gD~~~---~-~-- 241 (353)
T 4a6d_A 176 DLSVFPLMCDLGGGAGALAKECMSLYP---GCKITVFDIPEVVW----TAKQHFSFQEEEQIDFQE-GDFFK---D-P-- 241 (353)
T ss_dssp CGGGCSEEEEETCTTSHHHHHHHHHCS---SCEEEEEECHHHHH----HHHHHSCC--CCSEEEEE-SCTTT---S-C--
T ss_pred CcccCCeEEeeCCCCCHHHHHHHHhCC---CceeEeccCHHHHH----HHHHhhhhcccCceeeec-Ccccc---C-C--
Confidence 356667999999999999999999984 46678888755442 244443321122344432 24432 1 1
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC----C-CC----------------
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT----T-AP---------------- 172 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~----g-~P---------------- 172 (421)
...+|.|++..=.-.+ .| +=....++++.+.|+|+|.|.|.=.- + .|
T Consensus 242 ~~~~D~~~~~~vlh~~---~d---------~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g 309 (353)
T 4a6d_A 242 LPEADLYILARVLHDW---AD---------GKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG 309 (353)
T ss_dssp CCCCSEEEEESSGGGS---CH---------HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC
T ss_pred CCCceEEEeeeecccC---CH---------HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC
Confidence 2347988875422111 11 11235677888899999998886421 1 12
Q ss_pred --cCcccHHHHHHhCCcEEEEEee
Q 014642 173 --FCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 173 --Y~sWnI~~LAa~aGL~L~~~~~ 194 (421)
++.=+.++|.+++||..++..+
T Consensus 310 ~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 310 QERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHCCCceEEEEE
Confidence 1111356788899999887754
No 219
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=88.76 E-value=0.42 Score=45.96 Aligned_cols=112 Identities=10% Similarity=0.016 Sum_probs=69.5
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccc---cCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSL---DSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSl---DS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~ 110 (421)
...++.+||=||=|-=.||..|++. + .|+|.-. .+...+ . .-. ++.+...++.++-++|++.+.
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~-~-~~~----~~~~~~~~v~~~~~~D~~~l~--- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHE-E-PIP----MSTYGWNLVRLQSGVDVFFIP--- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSC-C-CCC----CCSTTGGGEEEECSCCTTTSC---
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHH-H-HHH----hhhcCCCCeEEEeccccccCC---
Confidence 3456789999998888889999886 2 5766322 111111 0 000 011111357777777888764
Q ss_pred ccccCcccEEEEcCCC-CCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 111 ELSKRKFDRIIFNFPH-AGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH-~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...||.|+-|.+. +|. ....+...+ ..+..+..+|+|||.+.+....+
T Consensus 146 ---~~~fD~V~sd~~~~~g~--------~~~d~~~~l-~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 146 ---PERCDTLLCDIGESSPN--------PTVEAGRTL-RVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ---CCCCSEEEECCCCCCSS--------HHHHHHHHH-HHHHHHHHHCCTTCEEEEEESCC
T ss_pred ---cCCCCEEEECCccccCc--------chhhHHHHH-HHHHHHHHHhCCCCEEEEEeCCC
Confidence 2579999999864 342 111232223 47788889999999888877665
No 220
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=88.75 E-value=0.25 Score=45.12 Aligned_cols=115 Identities=19% Similarity=0.167 Sum_probs=70.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh----CCCEEEeecccCCcCcccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK----LGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~----~Gv~VlhgVDATkL~~~~~ 111 (421)
.+..+||=||=|.=.++..|++. +.+++++-.+ .+.+ + .+..++..... ..+ .+...|+..+....
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s-~~~l-~---~a~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~- 125 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDAS-DKML-K---YALKERWNRRKEPAFDKW-VIEEANWLTLDKDV- 125 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESC-HHHH-H---HHHHHHHHTTTSHHHHTC-EEEECCGGGHHHHS-
T ss_pred cCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECC-HHHH-H---HHHHhhhhccccccccee-eEeecChhhCcccc-
Confidence 35679999999999999999986 2367666554 2222 2 13333321111 123 33445666654221
Q ss_pred cccCcccEEEEc---CCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 112 LSKRKFDRIIFN---FPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 112 Lk~~~FDrIIFN---FPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
+....||.|+.+ +-|+.... ........+++.+..+|+|+|.+.++..+
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSK---------GDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSS---------SSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccc---------cCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 345789999986 33443100 01233467889999999999999998765
No 221
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=88.38 E-value=1.8 Score=43.02 Aligned_cols=120 Identities=16% Similarity=0.175 Sum_probs=72.5
Q ss_pred HHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-----CCEEEeecccCCcCcccccccCcccEEEEcCCC
Q 014642 52 SFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-----GASIIHGVDATEMKEHSELSKRKFDRIIFNFPH 126 (421)
Q Consensus 52 SlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-----Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH 126 (421)
|..||... ....|+|.-.+. . +.....+|++.+--. ....+...|++++.. +....||+|+-+=|+
T Consensus 163 T~~la~~~-~~~~l~A~D~~~-~----R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~---~~~~~fD~VLlDaPC 233 (359)
T 4fzv_A 163 TLALLQTG-CCRNLAANDLSP-S----RIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE---LEGDTYDRVLVDVPC 233 (359)
T ss_dssp HHHHHHTT-CEEEEEEECSCH-H----HHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH---HSTTCEEEEEEECCC
T ss_pred HHHHHHhc-CCCcEEEEcCCH-H----HHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch---hccccCCEEEECCcc
Confidence 34444432 233577654442 2 122345666665321 123456678877653 245789999999999
Q ss_pred CCC---C-CCcc------cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHH
Q 014642 127 AGF---H-GKEE------DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEE 180 (421)
Q Consensus 127 ~G~---~-GkEd------~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~ 180 (421)
.|. . .++. ....+.....|=...+.+|..+|+|||.|.=+-|+=.|-..-.+++
T Consensus 234 Sg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 234 TTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp CCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHH
T ss_pred CCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHH
Confidence 982 1 1111 2233433344445678899999999999999999988876555554
No 222
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=88.28 E-value=0.42 Score=43.39 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=68.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk~ 114 (421)
.++.+||=||=|.=..+..|++.. +.++|+.-.+ .++.++ ++++ .+..+..+ ++..||..+.. .+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~--~~~~~~---a~~~---~~~~~~~~~~~~~~a~~~~~--~~~~ 126 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECN--DGVFQR---LRDW---APRQTHKVIPLKGLWEDVAP--TLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECC--HHHHHH---HHHH---GGGCSSEEEEEESCHHHHGG--GSCT
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCC--HHHHHH---HHHH---HhhCCCceEEEeehHHhhcc--cccc
Confidence 456799999999999999998764 3466654333 344332 3332 23344332 34456665543 2346
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..||.|+|+=..... ...|..-...||+.+..+|+|||.+..
T Consensus 127 ~~FD~i~~D~~~~~~---------~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 127 GHFDGILYDTYPLSE---------ETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp TCEEEEEECCCCCBG---------GGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred cCCceEEEeeeeccc---------chhhhcchhhhhhhhhheeCCCCEEEE
Confidence 789999997332221 112444567889999999999998754
No 223
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=87.93 E-value=2.8 Score=42.20 Aligned_cols=128 Identities=22% Similarity=0.261 Sum_probs=77.0
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
...+.+||=+|=|.=.|++.||+. +..++|.-.+ ++..+ .|+.|++... ..+ -+..-|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s--~~ai~---~A~~n~~~ng-l~v-~~~~~d~~~~~~------ 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSN--EFAIE---MARRNVEINN-VDA-EFEVASDREVSV------ 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHT-CCE-EEEECCTTTCCC------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcC-CcE-EEEECChHHcCc------
Confidence 345679999999998999999875 3467665544 23332 3566664322 223 344457776532
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
..||.||.|-|..|. ...++.. .. .|+|+|-|.|+..... -.-++..| . |.+.+..+
T Consensus 352 ~~fD~Vv~dPPr~g~------------~~~~~~~----l~-~l~p~givyvsc~p~t--larDl~~l---~-y~l~~~~~ 408 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGL------------HPRLVKR----LN-REKPGVIVYVSCNPET--FARDVKML---D-YRIDEIVA 408 (425)
T ss_dssp TTCSEEEECCCTTCS------------CHHHHHH----HH-HHCCSEEEEEESCHHH--HHHHHHHS---S-CCEEEEEE
T ss_pred cCCCEEEEcCCccch------------HHHHHHH----HH-hcCCCcEEEEECChHH--HHhHHhhC---e-EEEEEEEE
Confidence 179999999998774 1112221 11 2799998888753211 11122222 2 88888888
Q ss_pred CCCCCCCCC
Q 014642 195 FRKEDYPGY 203 (421)
Q Consensus 195 F~~~~YPGY 203 (421)
|| .||.=
T Consensus 409 ~D--mFP~T 415 (425)
T 2jjq_A 409 LD--MFPHT 415 (425)
T ss_dssp EC--CSTTS
T ss_pred EC--cCCCC
Confidence 88 57743
No 224
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=87.37 E-value=3 Score=40.72 Aligned_cols=136 Identities=18% Similarity=0.076 Sum_probs=83.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCcccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSE 111 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~ 111 (421)
...+.+||=+|=|.=.++..+|... ....|++.-.+. +.+ + .|+.|++. .|+ .-+..-|+.++..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~-~~l-~---~A~~n~~~---~gl~~~i~~~~~D~~~~~~--- 282 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYR-KHL-I---GAEMNALA---AGVLDKIKFIQGDATQLSQ--- 282 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCH-HHH-H---HHHHHHHH---TTCGGGCEEEECCGGGGGG---
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCH-HHH-H---HHHHHHHH---cCCCCceEEEECChhhCCc---
Confidence 3456789988888888888888764 223677766653 222 2 35666543 343 2344568887642
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLD 191 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~ 191 (421)
....||.||.|.|.--..|... ....|...|++.+..+| +|.+.+... +.-.++++..+.|+...+
T Consensus 283 -~~~~fD~Ii~npPyg~r~~~~~------~~~~ly~~~~~~l~r~l--~g~~~~i~~-----~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 283 -YVDSVDFAISNLPYGLKIGKKS------MIPDLYMKFFNELAKVL--EKRGVFITT-----EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp -TCSCEEEEEEECCCC------C------CHHHHHHHHHHHHHHHE--EEEEEEEES-----CHHHHHHHHHHTTEEEEE
T ss_pred -ccCCcCEEEECCCCCcccCcch------hHHHHHHHHHHHHHHHc--CCeEEEEEC-----CHHHHHHHHHHcCCEEEE
Confidence 2368999999999643222111 23456678888888888 455444433 223455677788999988
Q ss_pred EeeCC
Q 014642 192 CVQFR 196 (421)
Q Consensus 192 ~~~F~ 196 (421)
+.++.
T Consensus 349 ~~~~~ 353 (373)
T 3tm4_A 349 HRVIG 353 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 86653
No 225
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=86.32 E-value=2.6 Score=43.04 Aligned_cols=112 Identities=7% Similarity=-0.024 Sum_probs=63.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHH----hhhhHHHHHHHHH--hCCCEEEeecccCCcCcc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVK----KFKEARSNLDTLK--KLGASIIHGVDATEMKEH 109 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~----KY~~a~~Nl~~Lr--~~Gv~VlhgVDATkL~~~ 109 (421)
.++++||=||=|.=++++.||+..+. ..+++--.+. ++.+ ....++.|++.+. -..+.++.+ |+......
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~--~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g-D~~~~~~~ 316 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMD--DASDLTILQYEELKKRCKLYGMRLNNVEFSLK-KSFVDNNR 316 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCH--HHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES-SCSTTCHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCH--HHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc-Cccccccc
Confidence 46789999999999999999998753 3566555442 2222 1112244444322 113444443 22211100
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+......||+|+.|....+ + . +...++.+...|++||.|.+.
T Consensus 317 ~~~~~~~FDvIvvn~~l~~----~----d-------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFLFD----E----D-------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHGGGCSEEEECCTTCC----H----H-------HHHHHHHHHTTCCTTCEEEES
T ss_pred cccccCCCCEEEEeCcccc----c----c-------HHHHHHHHHHhCCCCeEEEEe
Confidence 0001367999999854422 1 1 123456677899999998886
No 226
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=86.04 E-value=1.4 Score=42.96 Aligned_cols=134 Identities=17% Similarity=0.216 Sum_probs=79.6
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc-------
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS------- 110 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~------- 110 (421)
..+||=+|=|.=.||++||+. +..|+|.-.+ .+..+ .++.|++...-.++.+ ..-||.++....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~--~~ai~---~a~~n~~~ng~~~v~~-~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIA--KPSVA---AAQYNIAANHIDNVQI-IRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCC--HHHHH---HHHHHHHHTTCCSEEE-ECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHHHHHcCCCceEE-EECCHHHHHHHHhhccccc
Confidence 468988888888888889874 2467766554 22322 4666765321113433 344776542110
Q ss_pred -----ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhC
Q 014642 111 -----ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKH 185 (421)
Q Consensus 111 -----~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~a 185 (421)
.+....||.||.|=|-.|. +. .+.++|+++|.|....|+.. .-.-++..|..
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~------------~~--------~~~~~l~~~g~ivyvsc~p~-t~ard~~~l~~-- 341 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGL------------DS--------ETEKMVQAYPRILYISCNPE-TLCKNLETLSQ-- 341 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCC------------CH--------HHHHHHTTSSEEEEEESCHH-HHHHHHHHHHH--
T ss_pred cccccccccCCCCEEEECcCcccc------------HH--------HHHHHHhCCCEEEEEECCHH-HHHHHHHHHhh--
Confidence 0112379999999998763 11 12334557888877777632 11234555653
Q ss_pred CcEEEEEeeCCCCCCCCCcc
Q 014642 186 SLLRLDCVQFRKEDYPGYSN 205 (421)
Q Consensus 186 GL~L~~~~~F~~~~YPGY~h 205 (421)
||.+.+..+|| .||.=.|
T Consensus 342 ~y~~~~~~~~D--~FP~T~H 359 (369)
T 3bt7_A 342 THKVERLALFD--QFPYTHH 359 (369)
T ss_dssp HEEEEEEEEEC--CSTTSSC
T ss_pred CcEEEEEEeec--cCCCCCc
Confidence 69999999998 4884333
No 227
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=85.36 E-value=2.4 Score=38.75 Aligned_cols=145 Identities=12% Similarity=0.114 Sum_probs=81.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccC--HHHHHHhhhh---------HHH----------HHH----HHH
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDS--YETVVKKFKE---------ARS----------NLD----TLK 91 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS--~eeL~~KY~~---------a~~----------Nl~----~Lr 91 (421)
++.+||=||=|.=-++..++.. + ..+|+|+=+.. .+.+.++... ... +++ .++
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-h-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 4578999999995566555543 2 23688765542 1222111100 000 011 111
Q ss_pred hCCCEEEeecccCCcCcccccccCcccEEEEcCC--CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 92 KLGASIIHGVDATEMKEHSELSKRKFDRIIFNFP--HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 92 ~~Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFP--H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
. .++-+.-.|+++...-..+....||.|+-+|= |+.. +..=+...++++..+|+|||.+.++-..
T Consensus 133 ~-~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~------------~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 133 A-AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC------------SLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp H-HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS------------SHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred h-hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC------------CHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1 23324556777743211122458999999872 2221 1122456888899999999999888532
Q ss_pred CC-------------CcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 170 TA-------------PFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 170 g~-------------PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
.. +++.=.+.++.+++||.+++...+.
T Consensus 200 ~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 200 RLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp SCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred cCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 21 1122246778888999999887664
No 228
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=84.65 E-value=3.1 Score=39.74 Aligned_cols=126 Identities=12% Similarity=0.144 Sum_probs=78.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
+...+||=||=|.=.++..|++++. ++..|.+|-. .+.+. +.. + .++++.. .|+.+ . +.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~~-~~~~~---a~~----~--~~v~~~~-~d~~~-~----~~-- 250 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP---HLKCTVFDQP-QVVGN---LTG----N--ENLNFVG-GDMFK-S----IP-- 250 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT---TSEEEEEECH-HHHSS---CCC----C--SSEEEEE-CCTTT-C----CC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC---CCeEEEeccH-HHHhh---ccc----C--CCcEEEe-CccCC-C----CC--
Confidence 5668999999999999999999873 3455667763 44332 111 1 2444443 35554 1 22
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCC---CCeEEEEecC----CC-----------------
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRP---RGEVHVSHKT----TA----------------- 171 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~---~GeIHVTLk~----g~----------------- 171 (421)
.||.|+.++..--. . ..-...+++.+..+|+| +|.|.|.-.. +.
T Consensus 251 ~~D~v~~~~vlh~~---~---------d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~ 318 (358)
T 1zg3_A 251 SADAVLLKWVLHDW---N---------DEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLT 318 (358)
T ss_dssp CCSEEEEESCGGGS---C---------HHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcccccCC---C---------HHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhc
Confidence 39999998764332 1 11134678888999999 9998875321 11
Q ss_pred -----CcCcccHHHHHHhCCcEEEEEee
Q 014642 172 -----PFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 172 -----PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.++.=++.++.+++||..++..+
T Consensus 319 ~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 319 MFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 01111445677788988887765
No 229
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=84.54 E-value=1.5 Score=44.85 Aligned_cols=104 Identities=22% Similarity=0.214 Sum_probs=65.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
+..+||=||=|.=.++..|++. + +..|+|.-.. + +.+ .|+.|++...- ..++++ .-|+.++. + ..
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s--~-~l~---~A~~~~~~~gl~~~v~~~-~~d~~~~~----~-~~ 223 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAS--T-MAQ---HAEVLVKSNNLTDRIVVI-PGKVEEVS----L-PE 223 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECH--H-HHH---HHHHHHHHTTCTTTEEEE-ESCTTTCC----C-SS
T ss_pred CCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcH--H-HHH---HHHHHHHHcCCCCcEEEE-ECchhhCc----c-CC
Confidence 5679999999998899988874 2 4578887664 2 222 35556554321 124444 44666642 2 25
Q ss_pred cccEEEEcCC-CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 116 KFDRIIFNFP-HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 116 ~FDrIIFNFP-H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
+||.||.|-| +... +..+ ...+..+..+|+|+|.+.++.
T Consensus 224 ~fD~Ivs~~~~~~~~------------~e~~-~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 224 QVDIIISEPMGYMLF------------NERM-LESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CEEEEECCCCHHHHT------------CHHH-HHHHHHGGGGEEEEEEEESCE
T ss_pred CeEEEEEeCchHhcC------------cHHH-HHHHHHHHHhcCCCCEEEEEe
Confidence 7999999977 2221 1122 334557889999999987654
No 230
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=83.86 E-value=1.2 Score=44.20 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=70.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH--------------hC-CCEEEeec
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK--------------KL-GASIIHGV 101 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr--------------~~-Gv~VlhgV 101 (421)
.+.+||=+|=|.=.+++.+|+..+ +..|+|--.+ ++.. .-++.|++.+. .. ++.| ..-
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~--~~av---~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v-~~~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDIS--EDAY---ELMKRNVMLNFDGELRESKGRAILKGEKTIVI-NHD 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESC--HHHH---HHHHHHHHHHCCSCCEECSSEEEEESSSEEEE-EES
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECC--HHHH---HHHHHHHHHhcccccccccccccccCCCceEE-EcC
Confidence 567999999999999999998865 3457665554 2222 24678887761 11 2333 444
Q ss_pred ccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC
Q 014642 102 DATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT 169 (421)
Q Consensus 102 DATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~ 169 (421)
||.++-... ...||.|+.| | .|. ...|+.+|..+|+++|.|+||..+
T Consensus 120 Da~~~~~~~---~~~fD~I~lD-P-~~~----------------~~~~l~~a~~~lk~gG~l~vt~td 166 (378)
T 2dul_A 120 DANRLMAER---HRYFHFIDLD-P-FGS----------------PMEFLDTALRSAKRRGILGVTATD 166 (378)
T ss_dssp CHHHHHHHS---TTCEEEEEEC-C-SSC----------------CHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cHHHHHHhc---cCCCCEEEeC-C-CCC----------------HHHHHHHHHHhcCCCCEEEEEeec
Confidence 776653221 3579999966 5 232 137888999999999999999744
No 231
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=83.32 E-value=11 Score=34.99 Aligned_cols=124 Identities=11% Similarity=0.126 Sum_probs=81.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk~~ 115 (421)
++.+||=||=|.=..+.+||+.. ....++|+-.+. ..+ ..|..|++...-.+ +.+..+ |+-. .+...
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~-~al----~~A~~N~~~~gl~~~i~~~~~-d~l~-----~l~~~ 82 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVE-GPY----QSAVKNVEAHGLKEKIQVRLA-NGLA-----AFEET 82 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSH-HHH----HHHHHHHHHTTCTTTEEEEEC-SGGG-----GCCGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCH-HHH----HHHHHHHHHcCCCceEEEEEC-chhh-----hcccC
Confidence 45689999999999999999863 344677776663 222 24667765543222 333333 4321 12222
Q ss_pred -cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 116 -KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 116 -~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
.||.|+.. |- | ..++..++..+...|+++|.+.+...++. -.+.+...++||.+.+.
T Consensus 83 ~~~D~Ivia----G~-G-----------g~~i~~Il~~~~~~L~~~~~lVlq~~~~~----~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 83 DQVSVITIA----GM-G-----------GRLIARILEEGLGKLANVERLILQPNNRE----DDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp GCCCEEEEE----EE-C-----------HHHHHHHHHHTGGGCTTCCEEEEEESSCH----HHHHHHHHHTTEEEEEE
T ss_pred cCCCEEEEc----CC-C-----------hHHHHHHHHHHHHHhCCCCEEEEECCCCH----HHHHHHHHHCCCEEEEE
Confidence 69998862 32 2 35678899999999999999988777542 34566677889887765
No 232
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=83.09 E-value=2.5 Score=34.56 Aligned_cols=73 Identities=11% Similarity=0.206 Sum_probs=46.7
Q ss_pred CCeEEEEecCChhHHHHHHHhhC-CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFG-SASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~g-s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
..+|+++|=|.+ ..+|++.+. .+..+++...+. +.++.+++.|+.++++ |+++......+.-..
T Consensus 6 ~~~v~I~G~G~i--G~~la~~L~~~g~~V~~id~~~------------~~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAA--GVGLVRELTAAGKKVLAVDKSK------------EKIELLEDEGFDAVIA-DPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHH--HHHHHHHHHHTTCCEEEEESCH------------HHHHHHHHTTCEEEEC-CTTCHHHHHHSCCTT
T ss_pred CCEEEEECCCHH--HHHHHHHHHHCCCeEEEEECCH------------HHHHHHHHCCCcEEEC-CCCCHHHHHhCCccc
Confidence 468999999874 555554441 245677765441 2356677788887765 887754332223357
Q ss_pred ccEEEEcCC
Q 014642 117 FDRIIFNFP 125 (421)
Q Consensus 117 FDrIIFNFP 125 (421)
.|.||.--|
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998666
No 233
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=83.00 E-value=9.1 Score=36.35 Aligned_cols=100 Identities=14% Similarity=0.237 Sum_probs=63.5
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++.+. . +-.|.+|- ..+.+. +.. ..++++. .-|+.+ . +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~~---a~~------~~~v~~~-~~d~~~---~--~p- 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-K--LKCIVFDR-PQVVEN---LSG------SNNLTYV-GGDMFT---S--IP- 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-T--CEEEEEEC-HHHHTT---CCC------BTTEEEE-ECCTTT---C--CC-
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-C--CeEEEeeC-HHHHhh---ccc------CCCcEEE-eccccC---C--CC-
Confidence 45678999999999999999999874 2 33556666 444432 111 1234433 335543 1 11
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCC---CCeEEEEe
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRP---RGEVHVSH 167 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~---~GeIHVTL 167 (421)
.||.|+.++-.--. . ..-...+++.+..+|+| +|.|.|.-
T Consensus 246 -~~D~v~~~~~lh~~---~---------d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 246 -NADAVLLKYILHNW---T---------DKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp -CCSEEEEESCGGGS---C---------HHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred -CccEEEeehhhccC---C---------HHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 29999998753322 1 11134778889999999 99988763
No 234
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=82.86 E-value=12 Score=36.05 Aligned_cols=128 Identities=18% Similarity=0.239 Sum_probs=78.2
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++.+. ++..|.+|- ..+.+.-. . ..+++++ .-|+.+ . +..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~a~---~------~~~v~~~-~~d~~~--~---~p~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYP---SINAINFDL-PHVIQDAP---A------FSGVEHL-GGDMFD--G---VPK 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTTCC---C------CTTEEEE-ECCTTT--C---CCC
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCC---CCEEEEEeh-HHHHHhhh---h------cCCCEEE-ecCCCC--C---CCC
Confidence 55678999999999999999999874 344566776 44433211 1 1234333 335543 1 112
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC--CCC--------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT--TAP-------------------- 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~P-------------------- 172 (421)
. |.|+..+-.-.. . ..-...+++.+..+|+|+|.|.|.=.. ..+
T Consensus 262 ~--D~v~~~~vlh~~-~-----------~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 327 (368)
T 3reo_A 262 G--DAIFIKWICHDW-S-----------DEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN 327 (368)
T ss_dssp C--SEEEEESCGGGB-C-----------HHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS
T ss_pred C--CEEEEechhhcC-C-----------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc
Confidence 2 999987754322 0 112346788899999999998885322 111
Q ss_pred -----cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 -----FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 -----Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
+..=+++++.+++||..++..+-
T Consensus 328 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 328 PGGKERTEKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp SBCCCCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCccCCHHHHHHHHHHCCCeeeEEEEe
Confidence 11113567778888888877554
No 235
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=82.68 E-value=4.6 Score=38.22 Aligned_cols=78 Identities=21% Similarity=0.173 Sum_probs=49.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=||=|.=.++..|++. +..|+|.-.|. .+.+ .++.|+....-.+++++. -|+.++.. .
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~--~~~~---~a~~~~~~~~~~~v~~~~-~D~~~~~~------~ 105 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDS--RMIS---EVKKRCLYEGYNNLEVYE-GDAIKTVF------P 105 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCH--HHHH---HHHHHHHHTTCCCEEC-----CCSSCC------C
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCH--HHHH---HHHHHHHHcCCCceEEEE-CchhhCCc------c
Confidence 45679999999999999999876 34788776663 2222 344555422112344443 47776532 3
Q ss_pred cccEEEEcCCCCC
Q 014642 116 KFDRIIFNFPHAG 128 (421)
Q Consensus 116 ~FDrIIFNFPH~G 128 (421)
.||.||.|.|.-.
T Consensus 106 ~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 106 KFDVCTANIPYKI 118 (299)
T ss_dssp CCSEEEEECCGGG
T ss_pred cCCEEEEcCCccc
Confidence 7999999999875
No 236
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=82.05 E-value=3.1 Score=36.81 Aligned_cols=79 Identities=15% Similarity=0.039 Sum_probs=51.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+.+||=+|=|.=.++..|++. +..|+|.-++ +.+.+ .+..|++.+.- ..+. +..-|+.++. ...
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~-----~~~ 143 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT---GMRVIAIDID--PVKIA---LARNNAEVYGIADKIE-FICGDFLLLA-----SFL 143 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTCGGGEE-EEESCHHHHG-----GGC
T ss_pred CCCEEEECccccCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcCCCcCeE-EEECChHHhc-----ccC
Confidence 6789999999999999999986 2467766554 22332 24555543321 1233 3445777664 246
Q ss_pred cccEEEEcCCCCCC
Q 014642 116 KFDRIIFNFPHAGF 129 (421)
Q Consensus 116 ~FDrIIFNFPH~G~ 129 (421)
.||.|+.|.|..+.
T Consensus 144 ~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 144 KADVVFLSPPWGGP 157 (241)
T ss_dssp CCSEEEECCCCSSG
T ss_pred CCCEEEECCCcCCc
Confidence 89999999998763
No 237
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=81.10 E-value=21 Score=34.46 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=77.7
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
++...+||=||=|.=.++..|++++. ++..|.+|- .++.+. +.. ..++++ ..-|+.+ . +..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p---~~~~~~~D~-~~~~~~---a~~------~~~v~~-~~~D~~~-~----~p~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP---TIKGVNFDL-PHVISE---APQ------FPGVTH-VGGDMFK-E----VPS 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTT---CCC------CTTEEE-EECCTTT-C----CCC
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC---CCeEEEecC-HHHHHh---hhh------cCCeEE-EeCCcCC-C----CCC
Confidence 56678999999999999999999874 344567776 333332 111 123433 3335554 1 112
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC--CCC--------------------
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT--TAP-------------------- 172 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~--g~P-------------------- 172 (421)
. |.|+..+-.-.. . .+-...+++++...|+|+|.+.|.=.. ..+
T Consensus 260 ~--D~v~~~~vlh~~-~-----------d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~ 325 (364)
T 3p9c_A 260 G--DTILMKWILHDW-S-----------DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHN 325 (364)
T ss_dssp C--SEEEEESCGGGS-C-----------HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHC
T ss_pred C--CEEEehHHhccC-C-----------HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcc
Confidence 2 999876543221 0 112347788899999999998875321 111
Q ss_pred -----cCcccHHHHHHhCCcEEEEEeeC
Q 014642 173 -----FCKWHIEELARKHSLLRLDCVQF 195 (421)
Q Consensus 173 -----Y~sWnI~~LAa~aGL~L~~~~~F 195 (421)
+..=++.++.+++||..++..+.
T Consensus 326 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 326 PGGRERYEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp SSCCCCBHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCccCCHHHHHHHHHHCCCceEEEEEc
Confidence 11113567788889888877654
No 238
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.06 E-value=2.7 Score=39.80 Aligned_cols=98 Identities=16% Similarity=0.287 Sum_probs=60.9
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
-..+++||+.|=|.. .++..||++.| .+|+||+... ++++.++++|+...++-+..++.+...-.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDD------------AKLNLARRLGAEVAVNARDTDPAAWLQKE 229 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCH------------HHHHHHHHcCCCEEEeCCCcCHHHHHHHh
Confidence 456889999998874 44555577775 3899986542 24567788998766544333322211001
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+|.||.+- |. ..-+..+.++|+++|.|.+.
T Consensus 230 ~g~~d~vid~~---g~-----------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 230 IGGAHGVLVTA---VS-----------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp HSSEEEEEESS---CC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEEeC---CC-----------------HHHHHHHHHHhccCCEEEEe
Confidence 23789888763 32 12356677889999987654
No 239
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=79.63 E-value=4.6 Score=38.93 Aligned_cols=96 Identities=15% Similarity=0.219 Sum_probs=59.9
Q ss_pred CCCeEEEEe-cCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc-ccccc
Q 014642 37 SKHQILLVG-EGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE-HSELS 113 (421)
Q Consensus 37 s~~rILLVG-EGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~-~~~Lk 113 (421)
++++||++| -|.. .++..||++++ +.+|+||+.+. +.++.++++|+...+.-+. .+.+ -..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~------------~~~~~~~~lGad~vi~~~~-~~~~~v~~~~ 236 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRP------------ETQEWVKSLGAHHVIDHSK-PLAAEVAALG 236 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSH------------HHHHHHHHTTCSEEECTTS-CHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCH------------HHHHHHHHcCCCEEEeCCC-CHHHHHHHhc
Confidence 567899999 7775 45556677754 45899997652 2356678899876554321 1111 11223
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+|.|+= .+|. ..-+..+.++|+++|.|.+.
T Consensus 237 ~~g~Dvvid---~~g~-----------------~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 237 LGAPAFVFS---TTHT-----------------DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCCEEEEEE---CSCH-----------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCceEEEE---CCCc-----------------hhhHHHHHHHhcCCCEEEEE
Confidence 467896654 2442 13456677899999998754
No 240
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.94 E-value=9.3 Score=36.23 Aligned_cols=116 Identities=10% Similarity=0.103 Sum_probs=69.3
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
-.++++||++|=|.. .++..||++.| .+|+||+...+ +++.++++|+...+ -|...+.
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~v~-~~~~~~~------ 232 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEH------------KKQDALSMGVKHFY-TDPKQCK------ 232 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSST------------THHHHHHTTCSEEE-SSGGGCC------
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHH------------HHHHHHhcCCCeec-CCHHHHh------
Confidence 456889999998764 45556677775 37999875532 24567788987655 3333322
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC-CCcCcccHHHHHHhCCcEEEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT-APFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g-~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
. .+|.|+=. +|. + ..+..+.++|+++|.|.+.=..+ .+....+...+....++.+...
T Consensus 233 ~-~~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~ 291 (348)
T 3two_A 233 E-ELDFIIST---IPT---H--------------YDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGS 291 (348)
T ss_dssp S-CEEEEEEC---CCS---C--------------CCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEEC
T ss_pred c-CCCEEEEC---CCc---H--------------HHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEE
Confidence 1 68887643 332 1 12455778999999977652222 2333344444443456666654
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=78.45 E-value=5.1 Score=38.26 Aligned_cols=118 Identities=15% Similarity=0.171 Sum_probs=67.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCC----CcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSA----SNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~----~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
...+||=+|=|.=.|+.++++..... .+|++.-.+.. . +.-|+.|+... ...+.+..+ |+... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~--~---~~~a~~n~~~~-g~~~~i~~~-D~l~~-----~ 197 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDL--L---ISLALVGADLQ-RQKMTLLHQ-DGLAN-----L 197 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHH--H---HHHHHHHHHHH-TCCCEEEES-CTTSC-----C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHH--H---HHHHHHHHHhC-CCCceEEEC-CCCCc-----c
Confidence 34578777777777777777765321 45666665532 2 22355565532 224544433 54331 1
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHH--------hHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRM--------HMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~--------nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
...+||.||-|-|. |....++ .... +..+-..|+..+..+|+++|.+.+.+.++
T Consensus 198 ~~~~fD~Ii~NPPf-g~~~~~~---~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 198 LVDPVDVVISDLPV-GYYPDDE---NAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CCCCEEEEEEECCC-SEESCHH---HHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ccCCccEEEECCCC-CCcCchh---hhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 24679999999993 2111110 0000 01123468999999999999998888554
No 242
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=77.05 E-value=5 Score=40.11 Aligned_cols=109 Identities=17% Similarity=0.243 Sum_probs=66.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk~~ 115 (421)
++++||=||-|-=-.|+-.|++ | +..|+|--... +.+ .|+.+++.-.-.+ ++|+++ |++.+.. ..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-G-A~~V~ave~s~---~~~---~a~~~~~~n~~~~~i~~i~~-~~~~~~l-----pe 148 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-G-ARRVYAVEASA---IWQ---QAREVVRFNGLEDRVHVLPG-PVETVEL-----PE 148 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST---THH---HHHHHHHHTTCTTTEEEEES-CTTTCCC-----SS
T ss_pred CCCEEEEeCCCccHHHHHHHHh-C-CCEEEEEeChH---HHH---HHHHHHHHcCCCceEEEEee-eeeeecC-----Cc
Confidence 4678999999987666655654 3 56788876542 222 2444443322112 555554 7776642 26
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCe-------EEEEecCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGE-------VHVSHKTT 170 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~Ge-------IHVTLk~g 170 (421)
+||.||-+-=..+.. +..+|..++....++|+|+|. +++...+.
T Consensus 149 ~~DvivsE~~~~~l~-----------~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~ 199 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLL-----------HESMLSSVLHARTKWLKEGGLLLPASAELFIVPISD 199 (376)
T ss_dssp CEEEEECCCCBTTBT-----------TTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred cccEEEeeccccccc-----------ccchhhhHHHHHHhhCCCCceECCccceEEEEEecc
Confidence 799999875444331 233466777777789998875 55655554
No 243
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=76.54 E-value=7.5 Score=37.10 Aligned_cols=100 Identities=18% Similarity=0.299 Sum_probs=58.7
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecc---cCCcCc-
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVD---ATEMKE- 108 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVD---ATkL~~- 108 (421)
...++++||++|=|.. .++..||+++| ..+|++|..+. +.++.++++|+...+..+ ..++.+
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSA------------TRLSKAKEIGADLVLQISKESPQEIARK 234 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCSEEEECSSCCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHhCCCEEEcCcccccchHHHH
Confidence 3456889999997653 35556677775 34788886542 235567788986544333 111111
Q ss_pred ccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 109 HSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
-..+....+|.||=. +|. + ..+..+.++|+++|.|.+.
T Consensus 235 i~~~~~~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 235 VEGQLGCKPEVTIEC---TGA---E--------------ASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp HHHHHTSCCSEEEEC---SCC---H--------------HHHHHHHHHSCTTCEEEEC
T ss_pred HHHHhCCCCCEEEEC---CCC---h--------------HHHHHHHHHhcCCCEEEEE
Confidence 011112569988643 332 1 1345677899999987653
No 244
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=76.10 E-value=21 Score=33.75 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=81.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccc-c
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELS-K 114 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk-~ 114 (421)
++.+||=||=|.=-.+.+||+.. ....++|+-.+. ..+ ..|..|++...-.+ +.|.. -|+-.. +. .
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~-~al----~~A~~N~~~~gl~~~I~v~~-gD~l~~-----~~~~ 88 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVD-GPF----QSAQKQVRSSGLTEQIDVRK-GNGLAV-----IEKK 88 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSH-HHH----HHHHHHHHHTTCTTTEEEEE-CSGGGG-----CCGG
T ss_pred CCCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCH-HHH----HHHHHHHHHcCCCceEEEEe-cchhhc-----cCcc
Confidence 35689999999999999999863 344677776663 222 24677765432212 33333 233322 12 2
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
..||.||. +|- | ..++..++..+...|+++|.+.+.-.++. -.+.+...+.||.+.+.
T Consensus 89 ~~~D~Ivi----agm-G-----------g~lI~~IL~~~~~~L~~~~~lIlq~~~~~----~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 89 DAIDTIVI----AGM-G-----------GTLIRTILEEGAAKLAGVTKLILQPNIAA----WQLREWSEQNNWLITSE 146 (244)
T ss_dssp GCCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGTTCCEEEEEESSCH----HHHHHHHHHHTEEEEEE
T ss_pred ccccEEEE----eCC-c-----------hHHHHHHHHHHHHHhCCCCEEEEEcCCCh----HHHHHHHHHCCCEEEEE
Confidence 36999886 442 2 35788899999999999999998876653 35666677788887654
No 245
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=74.03 E-value=11 Score=36.20 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=53.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++++||=||=|.=.++..|++. +..|+|.-.|.. +. ..++.++. ...+++|+.+ |+.++. +...
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~--li---~~a~~~~~--~~~~v~vi~g-D~l~~~----~~~~ 113 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKS--LE---PYANKLKE--LYNNIEIIWG-DALKVD----LNKL 113 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGG--GH---HHHHHHHH--HCSSEEEEES-CTTTSC----GGGS
T ss_pred CCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHH--HH---HHHHHHhc--cCCCeEEEEC-chhhCC----cccC
Confidence 45789999999999999999987 357888887742 11 12344444 2234555554 888764 2335
Q ss_pred cccEEEEcCCCC
Q 014642 116 KFDRIIFNFPHA 127 (421)
Q Consensus 116 ~FDrIIFNFPH~ 127 (421)
.||.||-|.|--
T Consensus 114 ~fD~Iv~NlPy~ 125 (295)
T 3gru_A 114 DFNKVVANLPYQ 125 (295)
T ss_dssp CCSEEEEECCGG
T ss_pred CccEEEEeCccc
Confidence 799999999954
No 246
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=73.82 E-value=30 Score=33.39 Aligned_cols=127 Identities=10% Similarity=0.048 Sum_probs=80.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+.+||=||=|.=.|+..|++. | +..|+|.=... +.|.. .+++ ..+.++-..|+..+... .+...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~-~mL~~----------a~r~~~rv~~~~~~ni~~l~~~-~l~~~ 150 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGT-NQLVW----------KLRQDDRVRSMEQYNFRYAEPV-DFTEG 150 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSS-SCSCH----------HHHTCTTEEEECSCCGGGCCGG-GCTTC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCH-HHHHH----------HHHhCcccceecccCceecchh-hCCCC
Confidence 3569999999999999999886 3 45787765442 22211 1332 23444555666665432 23334
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC---CC------------Cc----Ccc
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT---TA------------PF----CKW 176 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~---g~------------PY----~sW 176 (421)
.||.|+.+.-... +...|..+..+|+|+|.+.+..+. .. |. ..-
T Consensus 151 ~fD~v~~d~sf~s-----------------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~ 213 (291)
T 3hp7_A 151 LPSFASIDVSFIS-----------------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLE 213 (291)
T ss_dssp CCSEEEECCSSSC-----------------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHH
T ss_pred CCCEEEEEeeHhh-----------------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHH
Confidence 5999999864332 145777888899999999887432 10 10 112
Q ss_pred cHHHHHHhCCcEEEEEee
Q 014642 177 HIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 177 nI~~LAa~aGL~L~~~~~ 194 (421)
++.++++.+||.+.....
T Consensus 214 ~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 214 TVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEE
Confidence 356788899999888643
No 247
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=73.74 E-value=39 Score=31.53 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=85.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk~~ 115 (421)
++.+||=||=|.=-.+.+|++.. ....++|+-.+. ..+ ..|+.|++...-.+ +.|..+ |+-+.-. ...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~-~al----~~A~~N~~~~gl~~~I~~~~g-D~l~~~~----~~~ 89 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVN-GPY----QSALKNVSEHGLTSKIDVRLA-NGLSAFE----EAD 89 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSH-HHH----HHHHHHHHHTTCTTTEEEEEC-SGGGGCC----GGG
T ss_pred CCCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCH-HHH----HHHHHHHHHcCCCCcEEEEEC-chhhccc----ccc
Confidence 45689999999999999999863 345688876663 222 24777876543222 455444 4433211 123
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE-ee
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC-VQ 194 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~-~~ 194 (421)
.||.||. +|- | -.++..++..+...|+++|.+.+.-..+ .-.+.+...++||.+.+. .-
T Consensus 90 ~~D~Ivi----aGm-G-----------g~lI~~IL~~~~~~l~~~~~lIlqp~~~----~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 90 NIDTITI----CGM-G-----------GRLIADILNNDIDKLQHVKTLVLQPNNR----EDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp CCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCEEEE----eCC-c-----------hHHHHHHHHHHHHHhCcCCEEEEECCCC----hHHHHHHHHHCCCEEEEEEEE
Confidence 7999885 342 2 3567889999999999999888877554 345667778889988764 34
Q ss_pred CCC
Q 014642 195 FRK 197 (421)
Q Consensus 195 F~~ 197 (421)
++.
T Consensus 150 ~e~ 152 (230)
T 3lec_A 150 TEN 152 (230)
T ss_dssp EC-
T ss_pred EEC
Confidence 443
No 248
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=71.96 E-value=7.5 Score=37.52 Aligned_cols=100 Identities=17% Similarity=0.256 Sum_probs=60.2
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
...++++||++|-|.. .++..||++.| +..|++|.... +.++.++++|+...++.+..++.+. ..
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQA------------TKRRLAEEVGATATVDPSAGDVVEAIAG 245 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence 3456889999998764 34555677775 34788875442 2345667788876554433332211 11
Q ss_pred ---cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 ---LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 ---Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+....+|.|+=. +|. ...+..+..+|+++|.|.+.
T Consensus 246 ~~~~~~gg~Dvvid~---~G~-----------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVPGGVDVVIEC---AGV-----------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp TTSSSTTCEEEEEEC---SCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred hhhccCCCCCEEEEC---CCC-----------------HHHHHHHHHHhccCCEEEEE
Confidence 223478877642 442 13456677899999997653
No 249
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=70.90 E-value=9.6 Score=36.15 Aligned_cols=107 Identities=17% Similarity=0.200 Sum_probs=58.4
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-------EEEe-eccc------
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA-------SIIH-GVDA------ 103 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv-------~Vlh-gVDA------ 103 (421)
+.+||=||=|.=..+..+++.. ..+||++=.. .+.| + .|+...... +. .+-| -.|+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S-~~~l-~---~A~~~~~~~---~~~~~~~~~~~~f~~~d~~~d~~~ 118 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE--IALLVATDPD-ADAI-A---RGNERYNKL---NSGIKTKYYKFDYIQETIRSDTFV 118 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT--CSEEEEEESC-HHHH-H---HHHHHHHHH---CC----CCCEEEEEECCTTSSSHH
T ss_pred CCeEEEEecCCcHhHHHHHhcC--CCeEEEEECC-HHHH-H---HHHHHHHhc---cccccccccccchhhhhcccchhh
Confidence 5799999988654444555432 3467665443 3333 2 133322222 22 1212 2333
Q ss_pred CCcCcccccccCcccEEEEcCC-CCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 104 TEMKEHSELSKRKFDRIIFNFP-HAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 104 TkL~~~~~Lk~~~FDrIIFNFP-H~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.+|.+ .+....||.|+..|= |-.+ ..+ + +..+++++..+|+|||.+.++..
T Consensus 119 ~~l~~--~~~~~~FD~V~~~~~lhy~~-~~~--------~---~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 119 SSVRE--VFYFGKFNIIDWQFAIHYSF-HPR--------H---YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp HHHHT--TCCSSCEEEEEEESCGGGTC-STT--------T---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhc--cccCCCeeEEEECchHHHhC-CHH--------H---HHHHHHHHHHHcCCCCEEEEEeC
Confidence 12211 123468999998872 1111 111 2 25889999999999999988764
No 250
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=69.33 E-value=11 Score=34.94 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=65.7
Q ss_pred eeeccCC-CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCc
Q 014642 31 WIMHYSS-KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKE 108 (421)
Q Consensus 31 ~i~~Yss-~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~ 108 (421)
||..+.. ..+||=||=|.=.++..|++.. .+|+|+-.. .+.+ + ..++ .++.++ .-|+.++.
T Consensus 32 ~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s-~~ml-~----------~a~~~~~v~~~-~~~~e~~~- 94 (257)
T 4hg2_A 32 WLGEVAPARGDALDCGCGSGQASLGLAEFF---ERVHAVDPG-EAQI-R----------QALRHPRVTYA-VAPAEDTG- 94 (257)
T ss_dssp HHHHHSSCSSEEEEESCTTTTTHHHHHTTC---SEEEEEESC-HHHH-H----------TCCCCTTEEEE-ECCTTCCC-
T ss_pred HHHHhcCCCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCc-HHhh-h----------hhhhcCCceee-hhhhhhhc-
Confidence 4444444 4689999999989999998764 478776443 3332 2 1122 244443 34676653
Q ss_pred ccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 109 HSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 109 ~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
+..+.||.|+.+.-.- -.+ ...|++.+..+|+|||.+.|.-.
T Consensus 95 ---~~~~sfD~v~~~~~~h---~~~------------~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 95 ---LPPASVDVAIAAQAMH---WFD------------LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp ---CCSSCEEEEEECSCCT---TCC------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ccCCcccEEEEeeehh---Hhh------------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 5578999999864321 111 13588889999999999876543
No 251
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=68.57 E-value=16 Score=35.01 Aligned_cols=99 Identities=19% Similarity=0.155 Sum_probs=58.7
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc--CCcCcc-
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA--TEMKEH- 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA--TkL~~~- 109 (421)
....+++||++|-|.. .++..||++.| +..|+||....+ +++.++++|+...+..+. .++.+.
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~v 258 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGE------------KFPKAKALGATDCLNPRELDKPVQDVI 258 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCcEEEccccccchHHHHH
Confidence 3456889999997754 35556677775 347888865421 245667789865443321 112111
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHV 165 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHV 165 (421)
..+....+|.||=. +|. ...+..+.++|+++ |.|.+
T Consensus 259 ~~~~~~g~Dvvid~---~G~-----------------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 259 TELTAGGVDYSLDC---AGT-----------------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HHHHTSCBSEEEES---SCC-----------------HHHHHHHHHTBCTTTCEEEE
T ss_pred HHHhCCCccEEEEC---CCC-----------------HHHHHHHHHHhhcCCCEEEE
Confidence 11122379988643 342 13356677899999 98764
No 252
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=68.34 E-value=21 Score=34.20 Aligned_cols=100 Identities=19% Similarity=0.198 Sum_probs=60.9
Q ss_pred ccCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecc--cCCcCc-c
Q 014642 34 HYSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVD--ATEMKE-H 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVD--ATkL~~-~ 109 (421)
...++++||++|-|..- ++..||++.| +.+|+|+....+ .++.++++|+......+ ...+.+ -
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i 256 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSK------------KYETAKKFGVNEFVNPKDHDKPIQEVI 256 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTT------------HHHHHHTTTCCEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCcEEEccccCchhHHHHH
Confidence 34568899999988653 4455577776 447999875532 25567788987654433 112211 1
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVT 166 (421)
..+....+|.||=. +|. ...+..+.++|+++ |.|.+.
T Consensus 257 ~~~~~gg~D~vid~---~g~-----------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTDGGVDYSFEC---IGN-----------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp HHHTTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhcCCCCCEEEEC---CCC-----------------HHHHHHHHHHhhccCCEEEEE
Confidence 11223479988643 442 13466788899996 887654
No 253
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=68.00 E-value=18 Score=34.53 Aligned_cols=99 Identities=18% Similarity=0.072 Sum_probs=59.2
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc--CCcCcc-c
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA--TEMKEH-S 110 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA--TkL~~~-~ 110 (421)
...+++||++|-|.. .++..||++.| +..|++|..+.+ .++.++++|+...+..+. .++.+. .
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKD------------KFPKAIELGATECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHH------------HHHHHHHcCCcEEEecccccchHHHHHH
Confidence 456789999997764 35566678876 347888865421 244667789865543321 112111 1
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEE
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVS 166 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVT 166 (421)
.+....+|.||=. +|. ...+..+.++|+++ |.|.+.
T Consensus 256 ~~t~gg~Dvvid~---~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 256 EKTNGGVDYAVEC---AGR-----------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp HHTTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHhCCCCCEEEEC---CCC-----------------HHHHHHHHHHHhcCCCEEEEE
Confidence 1122479988743 332 12356677899999 987543
No 254
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=67.75 E-value=5.5 Score=35.21 Aligned_cols=78 Identities=17% Similarity=0.276 Sum_probs=45.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhhC--CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFG--SASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~g--s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk 113 (421)
++++||+.|=..+ .-.+|++.+. .+.+|++++.+.. . ....+++|+..|.. ..+.+|.++......+-
T Consensus 3 ~~k~vlITGasgg-IG~~~a~~L~~~~g~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 73 (276)
T 1wma_A 3 GIHVALVTGGNKG-IGLAIVRDLCRLFSGDVVLTARDVT-R-------GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR 73 (276)
T ss_dssp CCCEEEESSCSSH-HHHHHHHHHHHHSSSEEEEEESSHH-H-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHhcCCeEEEEeCChH-H-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence 3568999985543 4455554432 2568888887632 1 22345566665543 35678888765432211
Q ss_pred ------cCcccEEEEc
Q 014642 114 ------KRKFDRIIFN 123 (421)
Q Consensus 114 ------~~~FDrIIFN 123 (421)
...+|.||.|
T Consensus 74 ~~~~~~~g~id~li~~ 89 (276)
T 1wma_A 74 DFLRKEYGGLDVLVNN 89 (276)
T ss_dssp HHHHHHHSSEEEEEEC
T ss_pred HHHHHhcCCCCEEEEC
Confidence 1378988876
No 255
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=67.49 E-value=20 Score=33.49 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++++||=||=|.=.++..|++.. .+|+|.-.|. .+.+ .+..++..... ..++++ .-|+.++..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~~-~~D~~~~~~------ 91 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDP--RLVA---ELHKRVQGTPVASKLQVL-VGDVLKTDL------ 91 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCH--HHHH---HHHHHHTTSTTGGGEEEE-ESCTTTSCC------
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCH--HHHH---HHHHHHHhcCCCCceEEE-Ecceecccc------
Confidence 457799999999999999999873 3788777663 2222 23333321110 124444 458877632
Q ss_pred CcccEEEEcCCCCC
Q 014642 115 RKFDRIIFNFPHAG 128 (421)
Q Consensus 115 ~~FDrIIFNFPH~G 128 (421)
..||.|+.|.|.-.
T Consensus 92 ~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 PFFDTCVANLPYQI 105 (285)
T ss_dssp CCCSEEEEECCGGG
T ss_pred hhhcEEEEecCccc
Confidence 26999999999876
No 256
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=66.80 E-value=30 Score=32.00 Aligned_cols=122 Identities=14% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++|+.+ ..+.+|+.+..+..... +...+.+++.|.. ..+.+|.++......+
T Consensus 47 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 47 GKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDA-------NETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 568999996653 344444443 13568888888765322 1233455666654 4567899887653222
Q ss_pred ---ccCcccEEEEcCCCCCCCC------CcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 ---SKRKFDRIIFNFPHAGFHG------KEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 ---k~~~FDrIIFNFPH~G~~G------kEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+.|.+|.|==.....+ .++-.+.+..|-.=.....+.+...++.+|.|...-
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 1257899998832111101 111123343343223334455556667778765543
No 257
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=65.58 E-value=11 Score=35.44 Aligned_cols=103 Identities=17% Similarity=0.229 Sum_probs=63.3
Q ss_pred CCCEEEeecccCCcCcccccccCcccEEEEcCCCCCCCC---CcccHHHHHHhHHH---HHHHHHhhHhccCCCCeEEEE
Q 014642 93 LGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHG---KEEDDEVIRMHMSL---VEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 93 ~Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~G---kEd~~~~I~~nr~L---L~~FF~SA~~lL~~~GeIHVT 166 (421)
+|-..++.-|+.+.-. .+....||.||.|=|-..... ..++...+..+... +...+..|..+|+++|.|.|.
T Consensus 19 ~~~~~i~~gD~~~~l~--~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 19 FGVHRLHVGDAREVLA--SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp --CEEEEESCHHHHHT--TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCEEEECcHHHHHh--hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3444556668877322 234578999999999864211 11122233334333 467888999999999999998
Q ss_pred ecCCC----CcCcc-------cHHHHHHhCCcEEEEEeeCCC
Q 014642 167 HKTTA----PFCKW-------HIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 167 Lk~g~----PY~sW-------nI~~LAa~aGL~L~~~~~F~~ 197 (421)
+-+.. .+..+ .|..+..+.|+.+.......+
T Consensus 97 ~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 97 VGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp ECCEEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred ECCCccccccCCcccccccHHHHHHHHHHcCCeeeccEEEeC
Confidence 86532 11111 466778889999888766554
No 258
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=65.40 E-value=7.4 Score=36.80 Aligned_cols=99 Identities=16% Similarity=0.250 Sum_probs=61.4
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc-ccc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE-HSE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~-~~~ 111 (421)
.-.++++||++|-|.. .++..||++.| +.+|+||.... ++++.++++|+.....-+. ++.+ -..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~------------~~~~~~~~lGa~~~i~~~~-~~~~~v~~ 233 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDD------------DRLALAREVGADAAVKSGA-GAADAIRE 233 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCH------------HHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCH------------HHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence 3456889999998864 34555677775 56899985542 2466778889876544332 1111 111
Q ss_pred c-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 L-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+ .+..+|.|+= .+|. ...+..+.++|+++|.|.+.
T Consensus 234 ~t~g~g~d~v~d---~~G~-----------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 234 LTGGQGATAVFD---FVGA-----------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp HHGGGCEEEEEE---SSCC-----------------HHHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCCeEEEE---CCCC-----------------HHHHHHHHHHHhcCCEEEEE
Confidence 1 2347887664 2442 12566778899999987654
No 259
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.39 E-value=13 Score=33.26 Aligned_cols=80 Identities=13% Similarity=0.276 Sum_probs=46.3
Q ss_pred eccCCCCeEEEEecC---Ch--hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeecccCCc
Q 014642 33 MHYSSKHQILLVGEG---DF--SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK-KLGASIIHGVDATEM 106 (421)
Q Consensus 33 ~~Yss~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-~~Gv~VlhgVDATkL 106 (421)
.....+++||+.|=+ .. ..+..|++. +.+|+++..+.. ..+.+++|. +.|....+.+|.++.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~---G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE---GAELAFTYVGDR---------FKDRITEFAAEFGSELVFPCDVADD 76 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSGG---------GHHHHHHHHHHTTCCCEEECCTTCH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc---CCCEEEEecchh---------hHHHHHHHHHHcCCcEEEECCCCCH
Confidence 345567899999953 33 333344433 457888877631 112233442 334456678899887
Q ss_pred Cccccc------ccCcccEEEEcC
Q 014642 107 KEHSEL------SKRKFDRIIFNF 124 (421)
Q Consensus 107 ~~~~~L------k~~~FDrIIFNF 124 (421)
.....+ ...+.|.+|.|=
T Consensus 77 ~~v~~~~~~~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 77 AQIDALFASLKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 654322 125789888874
No 260
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=65.36 E-value=32 Score=31.48 Aligned_cols=121 Identities=12% Similarity=0.129 Sum_probs=65.1
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+ +...++|++.|.. +.+.+|.++......+
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 102 (271)
T 3v2g_A 31 GKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERA-------QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE 102 (271)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 568999996652 344444443 13567888766654433 2345667776654 4577898887643222
Q ss_pred ---ccCcccEEEEcCCCCCCCC-----CcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 ---SKRKFDRIIFNFPHAGFHG-----KEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 ---k~~~FDrIIFNFPH~G~~G-----kEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+.|.+|.|==-..... .++-.+.+..|-.=.....+.+.+.|+.+|.|...
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1247899888732211111 11112333333222233345556667777886654
No 261
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=65.20 E-value=17 Score=34.45 Aligned_cols=98 Identities=18% Similarity=0.232 Sum_probs=58.0
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc-CCcCcc-cc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA-TEMKEH-SE 111 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA-TkL~~~-~~ 111 (421)
..++++||++|=|.. .++..||+++| ..|++|..+. +.++.++++|+...+..+- .++.+. ..
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~~~~~~~~~~~i~~ 231 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSP------------RRLEVAKNCGADVTLVVDPAKEEESSIIE 231 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEECCTTTSCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCH------------HHHHHHHHhCCCEEEcCcccccHHHHHHH
Confidence 456889999997653 34556677775 3588886432 2345677889875554431 222111 11
Q ss_pred c-c---cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 L-S---KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 L-k---~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+ . +..+|.||-+ +|. . .-+..+..+|+++|.|.+.
T Consensus 232 ~~~~~~g~g~D~vid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 232 RIRSAIGDLPNVTIDC---SGN---E--------------KCITIGINITRTGGTLMLV 270 (352)
T ss_dssp HHHHHSSSCCSEEEEC---SCC---H--------------HHHHHHHHHSCTTCEEEEC
T ss_pred HhccccCCCCCEEEEC---CCC---H--------------HHHHHHHHHHhcCCEEEEE
Confidence 1 1 3579988753 342 0 1355677889999987653
No 262
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=64.59 E-value=14 Score=34.58 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=70.3
Q ss_pred ccCCCCeEEEEe-cCChhHHH-HHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-c
Q 014642 34 HYSSKHQILLVG-EGDFSFSF-ALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-S 110 (421)
Q Consensus 34 ~Yss~~rILLVG-EGDFSFSl-SLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~ 110 (421)
...++++||++| -|..--+. .|+++.| .++++|+.+. + .++.++++|+...++.+..++.+. .
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~-~-----------~~~~~~~~Ga~~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSP-E-----------KAAHAKALGAWETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSH-H-----------HHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCH-H-----------HHHHHHHcCCCEEEeCCCccHHHHHH
Confidence 345688999999 67665443 3467765 4899987542 1 244566778766554433332221 0
Q ss_pred c-cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEE
Q 014642 111 E-LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLR 189 (421)
Q Consensus 111 ~-Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L 189 (421)
. ..+..+|.||-+ +|. ..+..+..+|+++|.|.+.=..+.+...++...+..+..+.+
T Consensus 203 ~~~~~~g~Dvvid~---~g~------------------~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T 3jyn_A 203 ELTDGKKCPVVYDG---VGQ------------------DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYV 261 (325)
T ss_dssp HHTTTCCEEEEEES---SCG------------------GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEE
T ss_pred HHhCCCCceEEEEC---CCh------------------HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEE
Confidence 1 123579977653 342 134556778999998776544333444566666655544444
No 263
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=64.27 E-value=13 Score=35.54 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=58.9
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SEL 112 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~L 112 (421)
..++++||++|-|.. .++..||++.| +..|+|+..+. +.++.++++|+...+..+..++.+. ..+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVE------------SRLELAKQLGATHVINSKTQDPVAAIKEI 254 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCH------------HHHHHHHHcCCCEEecCCccCHHHHHHHh
Confidence 456789999997753 35666778876 33688886542 1345567778865544433222111 111
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
....+|.||-. +|. ...+..+.++|+++|.|.+
T Consensus 255 ~~gg~D~vid~---~g~-----------------~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 255 TDGGVNFALES---TGS-----------------PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TTSCEEEEEEC---SCC-----------------HHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEE
Confidence 22379987643 332 1345667789999998755
No 264
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=64.22 E-value=64 Score=29.84 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=64.7
Q ss_pred CCeEEEEecCC---hhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-----
Q 014642 38 KHQILLVGEGD---FSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH----- 109 (421)
Q Consensus 38 ~~rILLVGEGD---FSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~----- 109 (421)
..+||=||=|. =.++..+++.. .+..|++.-++ ..+++ .++.++ ...+-.-+...|+.++...
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~s--p~~l~---~Ar~~~---~~~~~v~~~~~D~~~~~~~~~~~~ 148 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDID--PMVLT---HGRALL---AKDPNTAVFTADVRDPEYILNHPD 148 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESS--HHHHH---HHHHHH---TTCTTEEEEECCTTCHHHHHHSHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECC--hHHHH---HHHHhc---CCCCCeEEEEeeCCCchhhhccch
Confidence 46899998876 45565555544 34566655444 33333 233343 2233334455688764311
Q ss_pred --cccccCcccEEEEcC--CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 110 --SELSKRKFDRIIFNF--PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 110 --~~Lk~~~FDrIIFNF--PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
..+....||.|+.++ -|+.. + -....|+.+..+|+|||.+.|+....
T Consensus 149 ~~~~~d~~~~d~v~~~~vlh~~~d---~-----------~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 149 VRRMIDFSRPAAIMLVGMLHYLSP---D-----------VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHCCTTSCCEEEETTTGGGSCT---T-----------THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred hhccCCCCCCEEEEEechhhhCCc---H-----------HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 012224799999885 23321 0 13467888889999999999998764
No 265
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=63.62 E-value=21 Score=34.07 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=57.9
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc--CCcCcc-
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA--TEMKEH- 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA--TkL~~~- 109 (421)
....+++||++|-|.. .++..||++.| +..|+||....+ +++.++++|+...+..+. ..+.+.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~~~~v 253 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKD------------KFARAKEFGATECINPQDFSKPIQEVL 253 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHHTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCceEeccccccccHHHHH
Confidence 3456789999997754 34556677776 347888865421 244556678765433321 112111
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVT 166 (421)
..+....+|.||=. +|. ...+..+.++|+++ |.|.+.
T Consensus 254 ~~~~~~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 254 IEMTDGGVDYSFEC---IGN-----------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp HHHTTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEEC---CCc-----------------HHHHHHHHHhhccCCcEEEEE
Confidence 11122479988743 332 12356677899999 987553
No 266
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=63.31 E-value=9.3 Score=35.62 Aligned_cols=88 Identities=15% Similarity=0.206 Sum_probs=55.8
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk 113 (421)
..++++||+.|=|.. .++..||++.| .+++||+ ..+ +++.++++|+...++ |+. .+
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~------------~~~~~~~lGa~~v~~-d~~------~v- 196 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASL------------SQALAAKRGVRHLYR-EPS------QV- 196 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSC------------CHHHHHHHTEEEEES-SGG------GC-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-Chh------------hHHHHHHcCCCEEEc-CHH------Hh-
Confidence 456899999999765 56666788886 3899998 321 245567789876653 422 22
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+|.|+ +. +|. + . +..+.++|+++|.+.+.
T Consensus 197 ~~g~Dvv~-d~--~g~---~--------------~-~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 197 TQKYFAIF-DA--VNS---Q--------------N-AAALVPSLKANGHIICI 228 (315)
T ss_dssp CSCEEEEE-CC---------------------------TTGGGEEEEEEEEEE
T ss_pred CCCccEEE-EC--CCc---h--------------h-HHHHHHHhcCCCEEEEE
Confidence 56788765 42 442 1 1 24567789999987665
No 267
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=61.97 E-value=26 Score=33.43 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=58.2
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc--CCcCcc-
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA--TEMKEH- 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA--TkL~~~- 109 (421)
....+++||++|-|.. .++..||++.| ...|+||....+ +++.++++|+...+..+. ..+.+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKD------------KFAKAKEVGATECVNPQDYKKPIQEVL 254 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCceEecccccchhHHHHH
Confidence 3456789999997753 34555677765 337888865421 244667789865443321 112111
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVT 166 (421)
..+....+|.||=. +|. ...+..+.++|+++ |.|.+.
T Consensus 255 ~~~~~~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 255 TEMSNGGVDFSFEV---IGR-----------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp HHHTTSCBSEEEEC---SCC-----------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred HHHhCCCCcEEEEC---CCC-----------------HHHHHHHHHHhhcCCcEEEEe
Confidence 11122479988643 342 12356677899999 987643
No 268
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=61.62 E-value=27 Score=33.34 Aligned_cols=100 Identities=18% Similarity=0.170 Sum_probs=58.5
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeeccc--CCcCcc-
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDA--TEMKEH- 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDA--TkL~~~- 109 (421)
....+++||++|-|.. .++..||++.| +..|+||+.+.+ +++.++++|+...+..+. ..+.+.
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPD------------KFEKAKVFGATDFVNPNDHSEPISQVL 255 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCCEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHH------------HHHHHHHhCCceEEeccccchhHHHHH
Confidence 3456789999997653 34555677775 337888865421 244567789865443321 112111
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVT 166 (421)
..+....+|.||=+ +|. ...+..+.++|+++ |.|.+.
T Consensus 256 ~~~~~~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 256 SKMTNGGVDFSLEC---VGN-----------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp HHHHTSCBSEEEEC---SCC-----------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred HHHhCCCCCEEEEC---CCC-----------------HHHHHHHHHHhhcCCcEEEEE
Confidence 11112479988743 342 13356778899999 987653
No 269
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=60.33 E-value=37 Score=31.38 Aligned_cols=123 Identities=10% Similarity=0.072 Sum_probs=63.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+..+..++. .+...+.+++.|.. ..+.+|.++......+
T Consensus 49 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 49 DRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEED------AQQVKALIEECGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHH------HHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhH------HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 568999996542 344444443 13567888877633221 12223445566654 4567888886543222
Q ss_pred ---ccCcccEEEEcCCCCCCCC-Ccc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 ---SKRKFDRIIFNFPHAGFHG-KEE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 ---k~~~FDrIIFNFPH~G~~G-kEd-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
...+.|.+|.|==..+..+ .++ -.+.+..|-.=.....+.+...++.+|.|...-
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 1257899988843222111 111 123333332223334445556677778866543
No 270
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=59.94 E-value=14 Score=31.58 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=44.2
Q ss_pred CCeEEEEecCChhHHHHHH-HhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc-ccC
Q 014642 38 KHQILLVGEGDFSFSFALS-QKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL-SKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L-k~~ 115 (421)
+.+|+++|=|.+--.++.. ...+ +..+++...+. +.++.|++.|+.++++ |+++...-..+ .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~------------~~~~~~~~~g~~~~~g-d~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE------------EAAQQHRSEGRNVISG-DATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH------------HHHHHHHHTTCCEEEC-CTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH------------HHHHHHHHCCCCEEEc-CCCCHHHHHhccCCC
Confidence 5689999999876555432 2220 34677665442 1245577789988776 77654321122 235
Q ss_pred cccEEEEcCC
Q 014642 116 KFDRIIFNFP 125 (421)
Q Consensus 116 ~FDrIIFNFP 125 (421)
..|.||.--|
T Consensus 105 ~ad~vi~~~~ 114 (183)
T 3c85_A 105 HVKLVLLAMP 114 (183)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEEeCC
Confidence 6899998655
No 271
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=59.93 E-value=43 Score=29.93 Aligned_cols=121 Identities=13% Similarity=0.115 Sum_probs=60.4
Q ss_pred CCeEEEEecCCh-hHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCC--CEEEeecccCCcCccccc
Q 014642 38 KHQILLVGEGDF-SFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTL-KKLG--ASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 38 ~~rILLVGEGDF-SFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-r~~G--v~VlhgVDATkL~~~~~L 112 (421)
++++|+.|=+.+ -.-+++|+.+ ..+.+|+.+..+.. ..+.+++| ++.+ -...+.+|.++......+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 77 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER---------LEKSVHELAGTLDRNDSIILPCDVTNDAEIETC 77 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGG---------GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchH---------HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHH
Confidence 568999997654 2344444433 12567888876531 11112222 2232 245677899987654322
Q ss_pred c------cCcccEEEEcCCCCC----CCCCcc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 S------KRKFDRIIFNFPHAG----FHGKEE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 k------~~~FDrIIFNFPH~G----~~GkEd-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
- ..+.|.||.|=--.. .....+ -...+..|-.-.....+.+.+.++++|.|...-
T Consensus 78 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 78 FASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 1 257898888743222 001011 112233332223334455566777778765543
No 272
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=59.68 E-value=23 Score=29.12 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=47.1
Q ss_pred CCeEEEEecCChhHHHHHH-HhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALS-QKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
..+|+++|=|.+-.+++-. ... +..+++...|. +.++.|++.|+.+++| |+++...-....-..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~------------~~~~~~~~~g~~~i~g-d~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSR------------TRVDELRERGVRAVLG-NAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH------------HHHHHHHHTTCEEEES-CTTSHHHHHHTTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCH------------HHHHHHHHcCCCEEEC-CCCCHHHHHhcCccc
Confidence 4689999999876655542 222 45677665552 2355677789998776 777654322223357
Q ss_pred ccEEEEcCCC
Q 014642 117 FDRIIFNFPH 126 (421)
Q Consensus 117 FDrIIFNFPH 126 (421)
.|.||.-.|.
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 8999886654
No 273
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=59.45 E-value=31 Score=31.43 Aligned_cols=126 Identities=11% Similarity=0.099 Sum_probs=77.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.+.+||=||=|.=.|+..|++. | +..++|.=... +.|.. .+++. .+.+.-..|+..+... .+...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~-~ml~~----------a~~~~~~~~~~~~~~~~~~~~~-~~~~~ 102 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGT-NQLAW----------KIRSDERVVVMEQFNFRNAVLA-DFEQG 102 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSC-CCCCH----------HHHTCTTEEEECSCCGGGCCGG-GCCSC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCH-HHHHH----------HHHhCccccccccceEEEeCHh-HcCcC
Confidence 3569999999999999999987 3 34677765443 11110 12221 2334444455444321 22223
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecC------------C---CCc----Ccc
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKT------------T---APF----CKW 176 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~------------g---~PY----~sW 176 (421)
.||.+.|+...... ..+|..+..+|+|+|.+.+..+. | .|. ..-
T Consensus 103 ~~d~~~~D~v~~~l-----------------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~ 165 (232)
T 3opn_A 103 RPSFTSIDVSFISL-----------------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIE 165 (232)
T ss_dssp CCSEEEECCSSSCG-----------------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHH
T ss_pred CCCEEEEEEEhhhH-----------------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHH
Confidence 47888888765541 46888899999999999987421 1 011 112
Q ss_pred cHHHHHHhCCcEEEEEe
Q 014642 177 HIEELARKHSLLRLDCV 193 (421)
Q Consensus 177 nI~~LAa~aGL~L~~~~ 193 (421)
++.++++++||.+....
T Consensus 166 ~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 166 KVLKTATQLGFSVKGLT 182 (232)
T ss_dssp HHHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEE
Confidence 46678889999988764
No 274
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=59.30 E-value=24 Score=34.35 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=45.4
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
....+++||++|-|.. .++..||++.| ...|+||.... +.++.++++|+...+.-+..++.+. ..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSE------------VRRNLAKELGADHVIDPTKENFVEAVLD 276 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEEcCCCCCHHHHHHH
Confidence 3456889999998764 34555677775 44788886442 2355667789876554433332211 11
Q ss_pred c-ccCcccEEEE
Q 014642 112 L-SKRKFDRIIF 122 (421)
Q Consensus 112 L-k~~~FDrIIF 122 (421)
+ .++.+|.||=
T Consensus 277 ~t~g~g~D~vid 288 (404)
T 3ip1_A 277 YTNGLGAKLFLE 288 (404)
T ss_dssp HTTTCCCSEEEE
T ss_pred HhCCCCCCEEEE
Confidence 1 2357998763
No 275
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=59.08 E-value=20 Score=33.87 Aligned_cols=114 Identities=13% Similarity=0.156 Sum_probs=68.6
Q ss_pred cCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEe-ecccCCcCcccc
Q 014642 35 YSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL--GASIIH-GVDATEMKEHSE 111 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~Vlh-gVDATkL~~~~~ 111 (421)
..++.+||=||=|.=.||..|++. ..|+|.-+... +.. +.++....+.. ++.++. ..|++.|.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m--~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTL--GTS----GHEKPRLVETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECC--CCT----TSCCCCCCCCTTGGGEEEECSCCGGGCC----
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchh--hhh----hhhchhhhhhcCCCeEEEeccCcHhhCC----
Confidence 456789999999999999999987 26777655431 100 00000000111 344442 45887753
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCC--eEEEEecCCCCcC
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRG--EVHVSHKTTAPFC 174 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~G--eIHVTLk~g~PY~ 174 (421)
...||.|+.|+.+... .. .+. +...+. .+..+..+|+|+| .+.+.... |+.
T Consensus 146 --~~~fD~Vvsd~~~~~~--~~----~~d-~~~~l~-~L~~~~r~LkpGG~~~~v~~~~~--~~~ 198 (276)
T 2wa2_A 146 --PFQADTVLCDIGESNP--TA----AVE-ASRTLT-VLNVISRWLEYNQGCGFCVKVLN--PYS 198 (276)
T ss_dssp --CCCCSEEEECCCCCCS--CH----HHH-HHHHHH-HHHHHHHHHHHSTTCEEEEEESC--CCS
T ss_pred --CCCcCEEEECCCcCCC--ch----hhh-HHHHHH-HHHHHHHHhccCCCcEEEEEeCC--CCc
Confidence 4689999999985532 11 111 111122 6788888999999 88887665 554
No 276
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=57.35 E-value=18 Score=34.72 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=60.8
Q ss_pred EeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC----CCc
Q 014642 98 IHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT----APF 173 (421)
Q Consensus 98 lhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g----~PY 173 (421)
++.-|+.+.-. .+..+.||.|+.+=|--......-.+.....--..+...+..+..+|+++|.|.|.+.+. .|+
T Consensus 17 ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~ 94 (323)
T 1boo_A 17 MYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPA 94 (323)
T ss_dssp EEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEE
T ss_pred EEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcc
Confidence 34446655321 244678999999988754211111111223334567888999999999999999998764 233
Q ss_pred C---ccc-HHHHHHhCCcEEEEEeeCC
Q 014642 174 C---KWH-IEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 174 ~---sWn-I~~LAa~aGL~L~~~~~F~ 196 (421)
. .|. +..+....|+.+.......
T Consensus 95 ~~~~~~~~i~~~~~~~Gf~~~~~iiW~ 121 (323)
T 1boo_A 95 RSIYNFRVLIRMIDEVGFFLAEDFYWF 121 (323)
T ss_dssp ECCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred cccchHHHHHHHHHhCCCEEEEEEEEe
Confidence 2 233 2245578999988776654
No 277
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=56.95 E-value=1e+02 Score=34.95 Aligned_cols=110 Identities=14% Similarity=0.019 Sum_probs=70.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh---CCC--EEEeecccCCcCcccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK---LGA--SIIHGVDATEMKEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~---~Gv--~VlhgVDATkL~~~~~ 111 (421)
...+||=||=|.=.++..|++..+...+|++.-++ .+ +.+ .|..++..... .|. .-+..-|++++..
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS-~e-mLe---~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--- 792 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDIS-PK-GLA---RAAKMLHVKLNKEACNVKSATLYDGSILEFDS--- 792 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESC-HH-HHH---HHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECC-HH-HHH---HHHHHhhhccchhhcCCCceEEEECchHhCCc---
Confidence 57799999999999999999876433567665544 33 332 24455544321 232 2344557777643
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
....||.|+.+.----. ....+..|++.+..+|+|+ .+.|+..
T Consensus 793 -~d~sFDlVV~~eVLeHL------------~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 793 -RLHDVDIGTCLEVIEHM------------EEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp -TSCSCCEEEEESCGGGS------------CHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred -ccCCeeEEEEeCchhhC------------ChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 35789999996432111 1233567889999999998 7777654
No 278
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=56.76 E-value=14 Score=31.79 Aligned_cols=94 Identities=15% Similarity=0.239 Sum_probs=54.2
Q ss_pred cCCCCeEEEEe-cCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc-
Q 014642 35 YSSKHQILLVG-EGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE- 111 (421)
Q Consensus 35 Yss~~rILLVG-EGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~- 111 (421)
..++++||++| -|..-.+.+. ++..| .+|++++.+. + .++.++++|+.... |.++-.....
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~--d~~~~~~~~~~ 99 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSD-A-----------KREMLSRLGVEYVG--DSRSVDFADEI 99 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSH-H-----------HHHHHHTTCCSEEE--ETTCSTHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCH-H-----------HHHHHHHcCCCEEe--eCCcHHHHHHH
Confidence 45678999999 5766544433 45554 4788887642 1 12345567876543 4433211111
Q ss_pred ---cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 112 ---LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 112 ---Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
.....+|.||-| +|. ..+..+.++|+++|.|.+
T Consensus 100 ~~~~~~~~~D~vi~~---~g~------------------~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 100 LELTDGYGVDVVLNS---LAG------------------EAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp HHHTTTCCEEEEEEC---CCT------------------HHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEEC---Cch------------------HHHHHHHHHhccCCEEEE
Confidence 123469998865 342 125567788999997654
No 279
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=56.48 E-value=14 Score=35.34 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=58.2
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccC-CcCcccc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDAT-EMKEHSE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDAT-kL~~~~~ 111 (421)
....+++||++|-|.. .++..||++.| ..|+||+.+.+ .++.++++|+...+..+.. ++.+ .
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~v~~~~~~~~~~~--~ 239 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSR------------KREDAMKMGADHYIATLEEGDWGE--K 239 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSST------------THHHHHHHTCSEEEEGGGTSCHHH--H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH------------HHHHHHHcCCCEEEcCcCchHHHH--H
Confidence 3456889999998764 34556677776 36999886432 1345566787765544332 2211 1
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
+. ..+|.||=.-+..+. ..+..+.++|+++|.|.+
T Consensus 240 ~~-~~~D~vid~~g~~~~------------------~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 240 YF-DTFDLIVVCASSLTD------------------IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp SC-SCEEEEEECCSCSTT------------------CCTTTGGGGEEEEEEEEE
T ss_pred hh-cCCCEEEECCCCCcH------------------HHHHHHHHHhcCCCEEEE
Confidence 22 479988765443100 113456778899998654
No 280
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=56.09 E-value=22 Score=33.25 Aligned_cols=116 Identities=9% Similarity=0.076 Sum_probs=70.2
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCEEEe-ecccCCcCccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL--GASIIH-GVDATEMKEHS 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~Vlh-gVDATkL~~~~ 110 (421)
...++.+||=||=|.=.||..|++. ..|+|.=+... +.. +..+-...+.. ++.++. ..|++.|.
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m--~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--- 137 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTL--GVG----GHEVPRITESYGWNIVKFKSRVDIHTLP--- 137 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECC--CCS----SCCCCCCCCBTTGGGEEEECSCCTTTSC---
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchh--hhh----hhhhhhhhhccCCCeEEEecccCHhHCC---
Confidence 3456789999999999999999886 36777655431 100 00000000111 355442 45888764
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCC--eEEEEecCCCCcCc
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRG--EVHVSHKTTAPFCK 175 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~G--eIHVTLk~g~PY~s 175 (421)
...||.|+.|+.+... .. .+. +...+. .+..+..+|+|+| .+.+.... |+..
T Consensus 138 ---~~~fD~V~sd~~~~~~--~~----~~d-~~~~l~-~L~~~~r~LkpGG~~~fv~kv~~--~~~~ 191 (265)
T 2oxt_A 138 ---VERTDVIMCDVGESSP--KW----SVE-SERTIK-ILELLEKWKVKNPSADFVVKVLC--PYSV 191 (265)
T ss_dssp ---CCCCSEEEECCCCCCS--CH----HHH-HHHHHH-HHHHHHHHHHHCTTCEEEEEESC--TTSH
T ss_pred ---CCCCcEEEEeCcccCC--cc----chh-HHHHHH-HHHHHHHHhccCCCeEEEEEeCC--CCCh
Confidence 4689999999985532 11 111 111122 6788888999999 88887766 5543
No 281
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=56.02 E-value=13 Score=33.34 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=49.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~L- 112 (421)
++++||+.|=.++-.-++|++.+ ..+.+|++++.+.. ...+.+++|++.+ -...+.+|.++......+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER--------RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH--------HHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence 35689999974454555555544 23568988887642 1234456676654 345677899887653222
Q ss_pred -----ccCcccEEEEcC
Q 014642 113 -----SKRKFDRIIFNF 124 (421)
Q Consensus 113 -----k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 93 ~~~~~~~g~id~li~~A 109 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHHhCCCcEEEECC
Confidence 124789888873
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=55.33 E-value=36 Score=38.10 Aligned_cols=129 Identities=11% Similarity=0.048 Sum_probs=70.2
Q ss_pred CCCeEEEEecCChhHHHHHHHhhC--CCCcEEeccccCHHHHHHhhhhHHHHHHH-HHhCCC--EEEeecccCCcCcccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFG--SASNICASSLDSYETVVKKFKEARSNLDT-LKKLGA--SIIHGVDATEMKEHSE 111 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~g--s~~nLvATSlDS~eeL~~KY~~a~~Nl~~-Lr~~Gv--~VlhgVDATkL~~~~~ 111 (421)
.+.+||=.|=|.=+|..++++.++ ...+|++.-.|....-..+ ...|+.. .-..|+ ..+.+-|...+. .
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK---~RlNL~lN~LlhGi~~~~I~~dD~L~~~---~ 394 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLS---IRLGLLFPQLVSSNNAPTITGEDVCSLN---P 394 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHH---HHHHTTSTTTCBTTBCCEEECCCGGGCC---G
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHH---HHHHHHHhhhhcCCCcceEEecchhccc---c
Confidence 456777555555566777777653 2356888877754211110 1223221 001122 123333333321 1
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHH-HHh--------------HHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVI-RMH--------------MSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I-~~n--------------r~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
....+||.||-|=|-.+........... ... ..+...|+..|..+|+++|.+-+-+.++-
T Consensus 395 ~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~ 469 (878)
T 3s1s_A 395 EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQY 469 (878)
T ss_dssp GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHH
T ss_pred cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHH
Confidence 2347899999999997643321111111 000 12456799999999999999988887763
No 283
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.10 E-value=54 Score=30.30 Aligned_cols=121 Identities=11% Similarity=0.190 Sum_probs=61.6
Q ss_pred CCCeEEEEecCCh-hHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeecccCCcCccccc-
Q 014642 37 SKHQILLVGEGDF-SFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLK-KLGASIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 37 s~~rILLVGEGDF-SFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-~~Gv~VlhgVDATkL~~~~~L- 112 (421)
++++||+.|=+.+ -.-+++|+.+ ..+.+|+++..+. ... +.++++. +.|..+.+.+|.++......+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~--~~~-------~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD--ALK-------KRVEPLAEELGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH--HHH-------HHHHHHHHHHTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH--HHH-------HHHHHHHHhcCCceEEECCCCCHHHHHHHH
Confidence 3568999997654 2333444333 1256788887662 111 1223332 235556778899987654332
Q ss_pred -----ccCcccEEEEcCCCCC----CCC-----CcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 -----SKRKFDRIIFNFPHAG----FHG-----KEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 -----k~~~FDrIIFNFPH~G----~~G-----kEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+.|.+|.|==-.. ... .++-...+..|-.-.....+.+...++.+|.|...
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~i 168 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTL 168 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEE
Confidence 1257899998732111 000 11112333334333333444555566667775543
No 284
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=55.02 E-value=17 Score=34.14 Aligned_cols=98 Identities=8% Similarity=0.107 Sum_probs=58.8
Q ss_pred ccCCCCeEEEEec-CChhH-HHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH-HhCCCEEEeecccCCcCcc-
Q 014642 34 HYSSKHQILLVGE-GDFSF-SFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL-KKLGASIIHGVDATEMKEH- 109 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L-r~~Gv~VlhgVDATkL~~~- 109 (421)
...++++||++|= |..-- +..|+++.| .+|++|+.+. +.++.+ +++|+...++.+...+.+.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~~~~ 211 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGA------------EKCRFLVEELGFDGAIDYKNEDLAAGL 211 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCCSEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCCEEEECCCHHHHHHH
Confidence 3467889999998 66543 334456654 4899987542 135566 7889866554433332221
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..+..+.+|.||- .+|. ..+..+..+|+++|.|.+.
T Consensus 212 ~~~~~~~~d~vi~---~~g~------------------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 212 KRECPKGIDVFFD---NVGG------------------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHCTTCEEEEEE---SSCH------------------HHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCceEEEE---CCCc------------------chHHHHHHHHhhCCEEEEE
Confidence 1112357997654 2341 1356677899999987653
No 285
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=54.15 E-value=25 Score=32.92 Aligned_cols=99 Identities=15% Similarity=0.245 Sum_probs=60.7
Q ss_pred cCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccc
Q 014642 35 YSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SEL 112 (421)
Q Consensus 35 Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~L 112 (421)
..++++||++|=|.- .++..++++.+ +.+|+||+-.. +.++.++++|+....+-...+..+. ..+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~------------~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQ------------DKLNLAKKIGADVTINSGDVNPVDEIKKI 227 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCH------------HHHHHHHHTTCSEEEEC-CCCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcH------------HHhhhhhhcCCeEEEeCCCCCHHHHhhhh
Confidence 456889999998865 45555566654 56899986542 2356778889876654433332211 111
Q ss_pred -ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 113 -SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 113 -k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.+..+|.++.. +|. ..-+..+..+|+++|.+.+.
T Consensus 228 t~g~g~d~~~~~---~~~-----------------~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 228 TGGLGVQSAIVC---AVA-----------------RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp TTSSCEEEEEEC---CSC-----------------HHHHHHHHHTEEEEEEEEEC
T ss_pred cCCCCceEEEEe---ccC-----------------cchhheeheeecCCceEEEE
Confidence 24567887764 232 12355667789999997664
No 286
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=53.91 E-value=15 Score=36.77 Aligned_cols=75 Identities=21% Similarity=0.327 Sum_probs=47.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
...+|+++|=|.|...++- .+ ..+..+|+-..|. +.++.+++.|+.|++| |||+...-....-.
T Consensus 3 ~~~~viIiG~Gr~G~~va~--~L~~~g~~vvvId~d~------------~~v~~~~~~g~~vi~G-Dat~~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGR--LLLSSGVKMVVLDHDP------------DHIETLRKFGMKVFYG-DATRMDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECCSHHHHHHHH--HHHHTTCCEEEEECCH------------HHHHHHHHTTCCCEES-CTTCHHHHHHTTTT
T ss_pred CCCeEEEECCCHHHHHHHH--HHHHCCCCEEEEECCH------------HHHHHHHhCCCeEEEc-CCCCHHHHHhcCCC
Confidence 3468999999996665553 32 1245676665542 2356677889998887 99887543223345
Q ss_pred cccEEEEcCCC
Q 014642 116 KFDRIIFNFPH 126 (421)
Q Consensus 116 ~FDrIIFNFPH 126 (421)
..|.||--.|.
T Consensus 68 ~A~~viv~~~~ 78 (413)
T 3l9w_A 68 KAEVLINAIDD 78 (413)
T ss_dssp TCSEEEECCSS
T ss_pred ccCEEEECCCC
Confidence 67888775553
No 287
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=53.61 E-value=99 Score=27.89 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=64.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc--
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-- 112 (421)
+++++|+.|=+. -.-+++|+.+ ..+.+|+++...+.+.+ +...++|++.|.. ..+.+|.++......+
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDA-------EKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 356889998654 3344555443 13568888766655433 2345567776654 4567899887653222
Q ss_pred ----ccCcccEEEEcCCCCCCCCC-----cccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 113 ----SKRKFDRIIFNFPHAGFHGK-----EEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 113 ----k~~~FDrIIFNFPH~G~~Gk-----Ed~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
...+.|.+|.|==....... ++-.+.+..|-.=.....+.+.+.++++|.|...--
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 12478988876322111111 111223333322222233445556666888665543
No 288
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=53.56 E-value=19 Score=34.19 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=61.0
Q ss_pred ccCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 34 HYSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
...++++||++|-|..- ++..||++.| +..|+|++.+. +.++.++++|+...+..+..++.+. ..
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRK------------HCCDIALEYGATDIINYKNGDIVEQILK 229 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCH------------HHHHHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCH------------HHHHHHHHhCCceEEcCCCcCHHHHHHH
Confidence 34568999999987643 4555567765 44788886542 2355677889876655544433221 11
Q ss_pred c-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 L-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+ .++.+|.|+ + .+|. . ..+..+.++|+++|.+.+.
T Consensus 230 ~t~g~g~D~v~-d--~~g~---~--------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVV-I--AGGD---V--------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEE-E--CSSC---T--------------THHHHHHHHEEEEEEEEEC
T ss_pred HcCCCCCCEEE-E--CCCC---h--------------HHHHHHHHHHhcCCEEEEe
Confidence 1 235799876 3 2342 1 2356677889999987643
No 289
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=53.09 E-value=38 Score=31.64 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=58.6
Q ss_pred cCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccc
Q 014642 35 YSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SEL 112 (421)
Q Consensus 35 Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~L 112 (421)
-.++++||+.|=|.-- ++..+|++.| +..+++++-.. +.++.++++|+...++.+-....+. ..+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~------------~k~~~a~~lGa~~~i~~~~~~~~~~~~~~ 224 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISS------------EKLALAKSFGAMQTFNSSEMSAPQMQSVL 224 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechH------------HHHHHHHHcCCeEEEeCCCCCHHHHHHhh
Confidence 3567899999987654 4445577776 44566654432 2356778899876655443332221 112
Q ss_pred cc-CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 113 SK-RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 113 k~-~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
.. ..+|.| ++. +|. ...+..|.++|+++|.|.+.-
T Consensus 225 ~~~~g~d~v-~d~--~G~-----------------~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 225 RELRFNQLI-LET--AGV-----------------PQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGGCSSEEE-EEC--SCS-----------------HHHHHHHHHHCCTTCEEEECC
T ss_pred cccCCcccc-ccc--ccc-----------------cchhhhhhheecCCeEEEEEe
Confidence 22 445554 443 442 134566778999999987643
No 290
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=53.03 E-value=18 Score=34.75 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=58.7
Q ss_pred ccCCCCeEEEEe-cCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc-
Q 014642 34 HYSSKHQILLVG-EGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS- 110 (421)
Q Consensus 34 ~Yss~~rILLVG-EGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~- 110 (421)
....+++||++| -|..- .+..||+..| .+|++|+... +.++.++++|+...+..+...+.+..
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSD------------EKSAFLKSLGCDRPINYKTEPVGTVLK 225 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCH------------HHHHHHHHcCCcEEEecCChhHHHHHH
Confidence 345688999999 57664 4445567765 4799987642 12455677898766554433322111
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
.+....+|.||-+ +|. ..+..+.++|+++|.|.+
T Consensus 226 ~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 226 QEYPEGVDVVYES---VGG------------------AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp HHCTTCEEEEEEC---SCT------------------HHHHHHHHHEEEEEEEEE
T ss_pred HhcCCCCCEEEEC---CCH------------------HHHHHHHHHHhcCCEEEE
Confidence 1123568988765 342 124566778899997654
No 291
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=52.85 E-value=16 Score=34.64 Aligned_cols=94 Identities=14% Similarity=0.360 Sum_probs=57.3
Q ss_pred CCCeEEEE-ecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc-ccccc
Q 014642 37 SKHQILLV-GEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE-HSELS 113 (421)
Q Consensus 37 s~~rILLV-GEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~-~~~Lk 113 (421)
++++||++ |-|..- ++..||+..| .+|++|+.+. ++++.++++|+......+. .+.+ -..+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 214 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRN------------ETIEWTKKMGADIVLNHKE-SLLNQFKTQG 214 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSH------------HHHHHHHHHTCSEEECTTS-CHHHHHHHHT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHhcCCcEEEECCc-cHHHHHHHhC
Confidence 67899999 677764 4444567665 4899997642 2456677788875544332 1111 11123
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
.+.+|.|+ |. +|. ...+..+..+|+++|.|..
T Consensus 215 ~~g~Dvv~-d~--~g~-----------------~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 215 IELVDYVF-CT--FNT-----------------DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp CCCEEEEE-ES--SCH-----------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCccEEE-EC--CCc-----------------hHHHHHHHHHhccCCEEEE
Confidence 45789665 42 341 1345677789999999853
No 292
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=52.44 E-value=23 Score=31.44 Aligned_cols=76 Identities=13% Similarity=0.303 Sum_probs=42.0
Q ss_pred eccCCCCeEEEEecCChhHHHHHHHhhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc
Q 014642 33 MHYSSKHQILLVGEGDFSFSFALSQKFGS-ASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 33 ~~Yss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
.++....+|+++|-|. +...|++.+.. +. +++...|.. .++.++ .|+.+++| |+++...-..
T Consensus 4 ~~~~~~~~viI~G~G~--~G~~la~~L~~~g~-v~vid~~~~------------~~~~~~-~~~~~i~g-d~~~~~~l~~ 66 (234)
T 2aef_A 4 IDVAKSRHVVICGWSE--STLECLRELRGSEV-FVLAEDENV------------RKKVLR-SGANFVHG-DPTRVSDLEK 66 (234)
T ss_dssp ------CEEEEESCCH--HHHHHHHHSTTSEE-EEEESCGGG------------HHHHHH-TTCEEEES-CTTCHHHHHH
T ss_pred CCCCCCCEEEEECCCh--HHHHHHHHHHhCCe-EEEEECCHH------------HHHHHh-cCCeEEEc-CCCCHHHHHh
Confidence 3455567899999985 55667766632 33 554433321 234555 78888765 8876543222
Q ss_pred cccCcccEEEEcCC
Q 014642 112 LSKRKFDRIIFNFP 125 (421)
Q Consensus 112 Lk~~~FDrIIFNFP 125 (421)
..-...|.||.-.|
T Consensus 67 a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 67 ANVRGARAVIVDLE 80 (234)
T ss_dssp TTCTTCSEEEECCS
T ss_pred cCcchhcEEEEcCC
Confidence 22356899987543
No 293
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=51.09 E-value=55 Score=29.77 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=44.7
Q ss_pred CCeEEEEecCCh-----hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccc
Q 014642 38 KHQILLVGEGDF-----SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSE 111 (421)
Q Consensus 38 ~~rILLVGEGDF-----SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~ 111 (421)
+++||+.|=+.+ ..++.|++. +.+|+.++.+.. .+.+++|.+. +-...+.+|.++......
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~~----------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 92 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE---GAELAFTYVGQF----------KDRVEKLCAEFNPAAVLPCDVISDQEIKD 92 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT---TCEEEEEECTTC----------HHHHHHHHGGGCCSEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc---CCEEEEeeCchH----------HHHHHHHHHhcCCceEEEeecCCHHHHHH
Confidence 568999995433 445555543 467888887751 1234455433 334567789988765332
Q ss_pred c------ccCcccEEEEcC
Q 014642 112 L------SKRKFDRIIFNF 124 (421)
Q Consensus 112 L------k~~~FDrIIFNF 124 (421)
+ ...+.|.||.|=
T Consensus 93 ~~~~~~~~~g~id~li~nA 111 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHHHHHCSSCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 2 125789999884
No 294
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=50.84 E-value=14 Score=35.38 Aligned_cols=98 Identities=21% Similarity=0.297 Sum_probs=57.7
Q ss_pred ccCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 34 HYSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
...++++||++|-|..- .+..||++.| .++++|+.+. ++++.++++|+...++-+..++.+. ..
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSR------------EKLDRAFALGADHGINRLEEDWVERVYA 251 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCc------------hhHHHHHHcCCCEEEcCCcccHHHHHHH
Confidence 34568899999977543 3444567665 4899986542 2455677889865554222222211 11
Q ss_pred c-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 L-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+ .+..+|.|+=+ +|. + -+..+.++|+++|.|.+.
T Consensus 252 ~~~g~g~D~vid~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 252 LTGDRGADHILEI---AGG---A---------------GLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp HHTTCCEEEEEEE---TTS---S---------------CHHHHHHHEEEEEEEEEE
T ss_pred HhCCCCceEEEEC---CCh---H---------------HHHHHHHHhhcCCEEEEE
Confidence 1 23579977654 332 1 144567789999987654
No 295
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=50.05 E-value=20 Score=32.95 Aligned_cols=87 Identities=13% Similarity=0.134 Sum_probs=47.2
Q ss_pred ceeeeccCCCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCc
Q 014642 29 EKWIMHYSSKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEM 106 (421)
Q Consensus 29 ~K~i~~Yss~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL 106 (421)
..+..+-..++++|+.|=+.+ .-+++|+.+ ..+.+|++++.+. +. .+..+++|++.|.. ..+.+|.++.
T Consensus 15 ~~~~~~m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 15 VPRGSHMSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDA-KN-------VSAAVDGLRAAGHDVDGSSCDVTST 85 (279)
T ss_dssp ----------CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCcccccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEECCCCCH
Confidence 344444556778999996543 344444443 1356788888763 22 33456677777654 4566788876
Q ss_pred Cccccc------ccCcccEEEEcC
Q 014642 107 KEHSEL------SKRKFDRIIFNF 124 (421)
Q Consensus 107 ~~~~~L------k~~~FDrIIFNF 124 (421)
.....+ ...+.|.+|.|=
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECC
Confidence 543222 125789888874
No 296
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=49.96 E-value=25 Score=34.01 Aligned_cols=112 Identities=14% Similarity=0.240 Sum_probs=60.0
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCc-Ccc-c
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEM-KEH-S 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL-~~~-~ 110 (421)
....+++||++|=|.. .++..||++.| +..|+||+.+. +.++.++++|+.+ ...+..++ .+. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~-i~~~~~~~~~~~~~ 247 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNP------------ERLKLLSDAGFET-IDLRNSAPLRDQID 247 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHTTTCEE-EETTSSSCHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCH------------HHHHHHHHcCCcE-EcCCCcchHHHHHH
Confidence 3457889999997764 56777788886 44799987542 2355678889963 22222221 111 1
Q ss_pred cc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 111 EL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 111 ~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
.+ .+..+|.||-. +|........ .+. +. --..-+..+.++|+++|.|.+
T Consensus 248 ~~~~g~g~Dvvid~---~g~~~~~~~~-~~~-~~-~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 248 QILGKPEVDCGVDA---VGFEAHGLGD-EAN-TE-TPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp HHHSSSCEEEEEEC---SCTTCBCSGG-GTT-SB-CTTHHHHHHHHHEEEEEEEEC
T ss_pred HHhCCCCCCEEEEC---CCCccccccc-ccc-cc-ccHHHHHHHHHHHhcCCEEEE
Confidence 11 23469988654 3321000000 000 00 000135667778999998754
No 297
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=49.05 E-value=1.1e+02 Score=30.15 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=54.2
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhH
Q 014642 64 NICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHM 143 (421)
Q Consensus 64 nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr 143 (421)
.|++.-.| ..+.+ -|..|++...-.+..-+..-|+.++.. ...||.||.|=|---..|.+. . -.
T Consensus 258 ~v~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~l~~-----~~~fD~Iv~NPPYG~rl~~~~---~---l~ 321 (384)
T 3ldg_A 258 DISGFDFD--GRMVE---IARKNAREVGLEDVVKLKQMRLQDFKT-----NKINGVLISNPPYGERLLDDK---A---VD 321 (384)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCGGGCCC-----CCCSCEEEECCCCTTTTSCHH---H---HH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHHCCc-----cCCcCEEEECCchhhccCCHH---H---HH
Confidence 35555444 23332 366776544322234566678888753 247999999999754333211 1 12
Q ss_pred HHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEe
Q 014642 144 SLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCV 193 (421)
Q Consensus 144 ~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~ 193 (421)
.|...+.+..+. -++|.+.|-.-+.+ +.+..|+.-.++.
T Consensus 322 ~ly~~lg~~lk~--~~g~~~~iit~~~~---------l~~~~g~~~~~~~ 360 (384)
T 3ldg_A 322 ILYNEMGETFAP--LKTWSQFILTNDTD---------FEQKFGRKADKKR 360 (384)
T ss_dssp HHHHHHHHHHTT--CTTSEEEEEESCTT---------HHHHHTSCCSEEE
T ss_pred HHHHHHHHHHhh--CCCcEEEEEECCHH---------HHHHhCCCcccee
Confidence 233333322222 24888777665543 5555565544443
No 298
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=48.20 E-value=1.3e+02 Score=26.05 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=68.1
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-EEEeecccCCcCcccccccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA-SIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv-~VlhgVDATkL~~~~~Lk~~ 115 (421)
+++||+.|=..|- -.+|++.+ ..+.+|++++.+... ++.|...++ .+ +..|.+ ..... .-.
T Consensus 21 ~~~ilVtGatG~i-G~~l~~~L~~~G~~V~~~~R~~~~------------~~~~~~~~~~~~-~~~Dl~--~~~~~-~~~ 83 (236)
T 3e8x_A 21 GMRVLVVGANGKV-ARYLLSELKNKGHEPVAMVRNEEQ------------GPELRERGASDI-VVANLE--EDFSH-AFA 83 (236)
T ss_dssp CCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESSGGG------------HHHHHHTTCSEE-EECCTT--SCCGG-GGT
T ss_pred CCeEEEECCCChH-HHHHHHHHHhCCCeEEEEECChHH------------HHHHHhCCCceE-EEcccH--HHHHH-HHc
Confidence 5789999975543 23333332 235689998876421 234555677 55 455776 22111 124
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE-EecCC-CC---------c--CcccHHHHH
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV-SHKTT-AP---------F--CKWHIEELA 182 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV-TLk~g-~P---------Y--~sWnI~~LA 182 (421)
..|.||.|-.-.. .++-...++.|-.-...+++.|.+. ..|.|.. +-..+ .| | ..+.++.+.
T Consensus 84 ~~D~vi~~ag~~~---~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~ 158 (236)
T 3e8x_A 84 SIDAVVFAAGSGP---HTGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDEL 158 (236)
T ss_dssp TCSEEEECCCCCT---TSCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCC---CCCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHH
Confidence 6899998865333 2333344444533333444444321 1244433 32211 11 1 234556666
Q ss_pred HhCCcEEEEEee
Q 014642 183 RKHSLLRLDCVQ 194 (421)
Q Consensus 183 a~aGL~L~~~~~ 194 (421)
+..|+.+.-.++
T Consensus 159 ~~~gi~~~~lrp 170 (236)
T 3e8x_A 159 KRSSLDYTIVRP 170 (236)
T ss_dssp HHSSSEEEEEEE
T ss_pred HHCCCCEEEEeC
Confidence 666766655544
No 299
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=47.51 E-value=58 Score=30.10 Aligned_cols=117 Identities=9% Similarity=0.131 Sum_probs=60.3
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHH-HHhCCCEEEeecccCCcCcccc
Q 014642 38 KHQILLVGEG---DF--SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDT-LKKLGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 38 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~-Lr~~Gv~VlhgVDATkL~~~~~ 111 (421)
++++|+.|=+ .. ..++.|++. +.+|+++..+... .+.+++ +++.|..+.+.+|.++......
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 97 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSETF---------KKRVDPLAESLGVKLTVPCDVSDAESVDN 97 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGG---------HHHHHHHHHHHTCCEEEECCTTCHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChHH---------HHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 5689999965 22 334444433 5678888776321 111222 2333545778889998765433
Q ss_pred cc------cCcccEEEEcCCCCCC----C-----CCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 LS------KRKFDRIIFNFPHAGF----H-----GKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 Lk------~~~FDrIIFNFPH~G~----~-----GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+- ..+.|.+|.|==.... . ..++-.+.+..|-.-.....+.+...++.+|.|...
T Consensus 98 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~i 167 (296)
T 3k31_A 98 MFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTL 167 (296)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 21 2578999887422110 0 011112333334333333445555666667776554
No 300
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=47.25 E-value=1.2e+02 Score=27.33 Aligned_cols=124 Identities=17% Similarity=0.171 Sum_probs=65.2
Q ss_pred CCeEEEEecCChhHHHHHHHhhC-CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKFG-SASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~g-s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.. .-+++|+.+. .+.+|+.+.....+. ...++..++|+..|..+ .+.+|.++......+-
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDS-----DTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGH-----HHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 467899886543 5566666652 356788875532211 11334466777777765 4578998876543321
Q ss_pred ----cCcccEEEEcCCCCCCCCCcc-----cHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEe
Q 014642 114 ----KRKFDRIIFNFPHAGFHGKEE-----DDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSH 167 (421)
Q Consensus 114 ----~~~FDrIIFNFPH~G~~GkEd-----~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTL 167 (421)
..+.|.+|.|==-......++ -.+.+..|-.-.....+.+.+.|+.+|.|...-
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 257898888732211111111 122333332222333444555555667765543
No 301
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=46.20 E-value=10 Score=36.95 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=28.7
Q ss_pred HHHHHHhCCCEEEeecccCCcCccc-cc-------ccCcccEEEEcCCCCC
Q 014642 86 NLDTLKKLGASIIHGVDATEMKEHS-EL-------SKRKFDRIIFNFPHAG 128 (421)
Q Consensus 86 Nl~~Lr~~Gv~VlhgVDATkL~~~~-~L-------k~~~FDrIIFNFPH~G 128 (421)
-.+.|++.|++|+.+..++++.... .+ ..-.+|.||+--+..+
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 3467899999999887776665421 11 1246899999655554
No 302
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=46.15 E-value=50 Score=29.48 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=43.5
Q ss_pred CeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 39 HQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
.+||++| +.| -..+|++.+ ..+.+|++++.+.. ..+.|...|+.++. .|.+++. -..+
T Consensus 6 ~~ilVtG-aG~-iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~~~~~~~~~~~-~D~~d~~------~~~~ 64 (286)
T 3ius_A 6 GTLLSFG-HGY-TARVLSRALAPQGWRIIGTSRNPD------------QMEAIRASGAEPLL-WPGEEPS------LDGV 64 (286)
T ss_dssp CEEEEET-CCH-HHHHHHHHHGGGTCEEEEEESCGG------------GHHHHHHTTEEEEE-SSSSCCC------CTTC
T ss_pred CcEEEEC-CcH-HHHHHHHHHHHCCCEEEEEEcChh------------hhhhHhhCCCeEEE-ecccccc------cCCC
Confidence 5899999 533 244455444 23568999887642 13345556776554 5888865 2568
Q ss_pred cEEEEcCCCCC
Q 014642 118 DRIIFNFPHAG 128 (421)
Q Consensus 118 DrIIFNFPH~G 128 (421)
|.||.+-....
T Consensus 65 d~vi~~a~~~~ 75 (286)
T 3ius_A 65 THLLISTAPDS 75 (286)
T ss_dssp CEEEECCCCBT
T ss_pred CEEEECCCccc
Confidence 99998665443
No 303
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=46.01 E-value=26 Score=33.78 Aligned_cols=95 Identities=16% Similarity=0.273 Sum_probs=54.2
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
...++++||++|-|.. .++..||++.| ..|+||....+ .++.++++|+...+..+..+.. ..+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~--~~~ 254 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEA------------KREAAKALGADEVVNSRNADEM--AAH 254 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGG------------GHHHHHHHTCSEEEETTCHHHH--HTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEeccccHHHH--HHh
Confidence 3457899999998753 34555677765 35888875421 2345566787654433211110 111
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. ..+|.||-. +|. . .-+..+.++|+++|.|.+
T Consensus 255 ~-~g~Dvvid~---~g~---~--------------~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 255 L-KSFDFILNT---VAA---P--------------HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp T-TCEEEEEEC---CSS---C--------------CCHHHHHTTEEEEEEEEE
T ss_pred h-cCCCEEEEC---CCC---H--------------HHHHHHHHHhccCCEEEE
Confidence 2 468887643 332 1 113456678999998654
No 304
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=45.76 E-value=35 Score=29.02 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=39.3
Q ss_pred CeEEEEecCChhHHHHHHHh----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHhCCCEEEeec
Q 014642 39 HQILLVGEGDFSFSFALSQK----FGSASNICASSLD---SYETVVKKFKEARSNLDTLKKLGASIIHGV 101 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---S~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgV 101 (421)
-.|++|+=|+ ||.+|+.. +|...++.|-++. +.+++.+|..+ -++.+...|+.|+-++
T Consensus 6 i~iiivsHG~--~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~~---~i~~~~~~gvliLtDl 70 (142)
T 3bed_A 6 PKLILMSHGR--MAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLAA---ILKEAGNVPTLVLADL 70 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHHH---HHHHHCSCCEEEEESS
T ss_pred ccEEEEcChH--HHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHH---HHHhcCCCCEEEEEEC
Confidence 4799999997 88888754 3655678777764 44566666544 4666655577676554
No 305
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=45.46 E-value=51 Score=30.84 Aligned_cols=136 Identities=13% Similarity=0.166 Sum_probs=71.7
Q ss_pred CCeEEEEecCC-hhHHHHHHHh--h---CCC-----CcEEecccc--CHHHHHH---hhhhHHHHHHHHHhC--------
Q 014642 38 KHQILLVGEGD-FSFSFALSQK--F---GSA-----SNICASSLD--SYETVVK---KFKEARSNLDTLKKL-------- 93 (421)
Q Consensus 38 ~~rILLVGEGD-FSFSlSLa~~--~---gs~-----~nLvATSlD--S~eeL~~---KY~~a~~Nl~~Lr~~-------- 93 (421)
..+||=||=|- ++|...+... + ... .++|+.-.+ +.++|.+ .||....-.+.|-+.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 45899999886 7776655421 1 321 356665544 3344443 355433323333211
Q ss_pred -------C-CE-EEeecccCCc-CcccccccCcccEEEEc-CCCCCCCCCcccHHHHHHhHHH-HHHHHHhhHhccCCCC
Q 014642 94 -------G-AS-IIHGVDATEM-KEHSELSKRKFDRIIFN-FPHAGFHGKEEDDEVIRMHMSL-VEGFFRNASGMLRPRG 161 (421)
Q Consensus 94 -------G-v~-VlhgVDATkL-~~~~~Lk~~~FDrIIFN-FPH~G~~GkEd~~~~I~~nr~L-L~~FF~SA~~lL~~~G 161 (421)
| ++ -++--||.++ .+........||.|+++ |.-. .|-+| -..||.....+|+++|
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-------------~~p~lw~~~~l~~l~~~L~pGG 207 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-------------KNPDMWTQNLFNAMARLARPGG 207 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-------------TCGGGCCHHHHHHHHHHEEEEE
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-------------cChhhcCHHHHHHHHHHcCCCc
Confidence 1 22 1444577663 32211112379999997 3211 12222 2468888999999988
Q ss_pred eEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 162 EVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 162 eIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
.+. |-... . .+...-..+|+.+.+.
T Consensus 208 ~l~-tysaa----~-~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 208 TLA-TFTSA----G-FVRRGLQEAGFTMQKR 232 (257)
T ss_dssp EEE-ESCCB----H-HHHHHHHHHTEEEEEE
T ss_pred EEE-EEeCC----H-HHHHHHHHCCCEEEeC
Confidence 766 42211 1 2445555689998765
No 306
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=44.84 E-value=1.2e+02 Score=31.43 Aligned_cols=119 Identities=13% Similarity=0.110 Sum_probs=67.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH----HhCCC---E-EEeecccCCcC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL----KKLGA---S-IIHGVDATEMK 107 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L----r~~Gv---~-VlhgVDATkL~ 107 (421)
.++++||=||=|.=..++.||...+ ...+++--++. ++.+ -|+.|++.+ +..|. . -+..-|+.++.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~--~~le---lAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKAD--IPAK---YAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCH--HHHH---HHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCH--HHHH---HHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 4678999999888888888887764 33466655542 2222 244455433 22332 2 23445777764
Q ss_pred cccccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHH
Q 014642 108 EHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIE 179 (421)
Q Consensus 108 ~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~ 179 (421)
... .-..||.|+.|.+... . ..++.| ......|+|||.|.+ +..-.| ..|.|.
T Consensus 246 ~~d--~~~~aDVVf~Nn~~F~----p------dl~~aL-----~Ei~RvLKPGGrIVs-sE~f~p-~d~~i~ 298 (438)
T 3uwp_A 246 WRE--RIANTSVIFVNNFAFG----P------EVDHQL-----KERFANMKEGGRIVS-SKPFAP-LNFRIN 298 (438)
T ss_dssp HHH--HHHTCSEEEECCTTCC----H------HHHHHH-----HHHHTTSCTTCEEEE-SSCSSC-TTCCCC
T ss_pred ccc--ccCCccEEEEcccccC----c------hHHHHH-----HHHHHcCCCCcEEEE-eecccC-CCCCCC
Confidence 211 1146999999977532 1 122222 233468999999864 443333 345443
No 307
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=44.45 E-value=67 Score=29.81 Aligned_cols=84 Identities=18% Similarity=0.054 Sum_probs=47.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCH--HHHHHhhhhHHHHHHHHHhCC-CEEEeecccCCcCcccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSY--ETVVKKFKEARSNLDTLKKLG-ASIIHGVDATEMKEHSELS 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~--eeL~~KY~~a~~Nl~~Lr~~G-v~VlhgVDATkL~~~~~Lk 113 (421)
.+.+||=+|=|.=.+|..||+. + ..|++.-.+.. +-+......+..|++...-.+ ++++ .-|+.++-.. +.
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~-g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~-~~d~~~~l~~--~~ 156 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL-G--LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLH-FGNAAEQMPA--LV 156 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT-T--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEE-ESCHHHHHHH--HH
T ss_pred CcCeEEEeeCccCHHHHHHHHh-C--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEE-ECCHHHHHHh--hh
Confidence 4578998888888888888875 2 36776666541 111111223455554433223 4444 4566653211 22
Q ss_pred c--CcccEEEEcCCC
Q 014642 114 K--RKFDRIIFNFPH 126 (421)
Q Consensus 114 ~--~~FDrIIFNFPH 126 (421)
. ..||.|++|-|.
T Consensus 157 ~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred ccCCCccEEEECCCC
Confidence 2 679999999554
No 308
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=44.25 E-value=61 Score=30.14 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=58.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++++||=||=|.=.++..|++.. ..|+|.-.|.. +.+ .+++++.. ..+++++ .-|+.++.-.......
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~--~~~---~~~~~~~~--~~~v~~i-~~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRD--LVA---FLQKKYNQ--QKNITIY-QNDALQFDFSSVKTDK 96 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHH--HHH---HHHHHHTT--CTTEEEE-ESCTTTCCGGGSCCSS
T ss_pred CCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHH--HHH---HHHHHHhh--CCCcEEE-EcchHhCCHHHhccCC
Confidence 356799999999999999999763 47888777632 222 23344432 1245554 4588887532222246
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhh
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNA 153 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA 153 (421)
.|| ||-|.|.-= -..+|.+++...
T Consensus 97 ~~~-vv~NlPY~i-------------s~~il~~ll~~~ 120 (255)
T 3tqs_A 97 PLR-VVGNLPYNI-------------STPLLFHLFSQI 120 (255)
T ss_dssp CEE-EEEECCHHH-------------HHHHHHHHHHTG
T ss_pred CeE-EEecCCccc-------------CHHHHHHHHhCC
Confidence 788 999999632 235666776643
No 309
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=44.17 E-value=61 Score=26.70 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
..+||++|=|.+.-.++ +.+ ..+..+++...+..+.+ +.+..+...|+.+++| |+++........-..
T Consensus 3 ~~~vlI~G~G~vG~~la--~~L~~~g~~V~vid~~~~~~~--------~~~~~~~~~~~~~i~g-d~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGHSILAINTI--LQLNQRGQNVTVISNLPEDDI--------KQLEQRLGDNADVIPG-DSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECCSHHHHHHH--HHHHHTTCCEEEEECCCHHHH--------HHHHHHHCTTCEEEES-CTTSHHHHHHHTTTT
T ss_pred CCcEEEECCCHHHHHHH--HHHHHCCCCEEEEECCChHHH--------HHHHHhhcCCCeEEEc-CCCCHHHHHHcChhh
Confidence 46899999887765444 332 12456777766543211 1233444568888875 777654322222356
Q ss_pred ccEEEEcCC
Q 014642 117 FDRIIFNFP 125 (421)
Q Consensus 117 FDrIIFNFP 125 (421)
.|.||.--|
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 898887654
No 310
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=44.08 E-value=78 Score=29.99 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=55.8
Q ss_pred ccCCCCeEEEEec-CCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecc---cCCcCc
Q 014642 34 HYSSKHQILLVGE-GDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVD---ATEMKE 108 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVD---ATkL~~ 108 (421)
...++++||++|- |.. +++..||+..| ..+|+|+-.+. +..+.++.++++|+...++.+ ...+.+
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~--------~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRP--------DIQKLSDRLKSLGAEHVITEEELRRPEMKN 233 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCS--------CHHHHHHHHHHTTCSEEEEHHHHHSGGGGG
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCcc--------chHHHHHHHHhcCCcEEEecCcchHHHHHH
Confidence 3457889999997 655 46667788875 35565553221 112234567788987554432 122221
Q ss_pred cccccc-CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 109 HSELSK-RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 109 ~~~Lk~-~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
. ... ..+|.|| +. +|. .. . ..+.++|+++|.|.+.
T Consensus 234 ~--~~~~~~~Dvvi-d~--~g~-------------~~----~-~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 234 F--FKDMPQPRLAL-NC--VGG-------------KS----S-TELLRQLARGGTMVTY 269 (357)
T ss_dssp T--TSSSCCCSEEE-ES--SCH-------------HH----H-HHHHTTSCTTCEEEEC
T ss_pred H--HhCCCCceEEE-EC--CCc-------------HH----H-HHHHHhhCCCCEEEEE
Confidence 1 111 1488765 32 442 01 1 2356799999987653
No 311
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=43.58 E-value=49 Score=29.16 Aligned_cols=78 Identities=13% Similarity=0.187 Sum_probs=45.7
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-c-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-S- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-k- 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+.. . .....+.|++.|.. ..+.+|.++......+ .
T Consensus 13 ~k~vlItGasgg-iG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 13 NRVAIVTGGAQN-IGLACVTALAEAGARVIIADLDEA-M-------ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 568999987654 344454443 13568888877632 1 22345566666643 3567888876543221 1
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 84 ~~~~~~~id~vi~~A 98 (260)
T 3awd_A 84 VHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 14689998873
No 312
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=43.49 E-value=37 Score=33.74 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=67.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhhC------------CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC---CCEEEeec
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFG------------SASNICASSLDSYETVVKKFKEARSNLDTLKKL---GASIIHGV 101 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~g------------s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~---Gv~VlhgV 101 (421)
.+.+||=.|=|.=+|..++++.+. ...++++.-.+.. . +.-|..|+. |... .+.|.++
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~--~---~~lA~~nl~-l~g~~~~~~~i~~g- 243 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPL--V---VTLASMNLY-LHGIGTDRSPIVCE- 243 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHH--H---HHHHHHHHH-HTTCCSSCCSEEEC-
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHH--H---HHHHHHHHH-HhCCCcCCCCEeeC-
Confidence 356888777777777777776541 1245776665532 1 223445543 2222 2333332
Q ss_pred ccCCcCcccccccCcccEEEEcCCCCCCCCCccc--HHHHH-HhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 102 DATEMKEHSELSKRKFDRIIFNFPHAGFHGKEED--DEVIR-MHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 102 DATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~--~~~I~-~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
|+-.... ..+||.||-|-|..+....+.. ..... .....-..|++.+..+|+++|.+-+.+.++
T Consensus 244 D~l~~~~-----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 244 DSLEKEP-----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp CTTTSCC-----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCCCcc-----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 4433321 2489999999998874321110 00000 000112378888889999999988777554
No 313
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=43.43 E-value=96 Score=28.11 Aligned_cols=79 Identities=14% Similarity=0.167 Sum_probs=46.2
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|+++..+..+.+ +...++|++.|.. ..+.+|.++......+
T Consensus 29 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESA-------EEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHH
Confidence 567888886653 344555443 13568888887764322 2234556666654 4467788876543221
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 101 ~~~~~g~iD~lv~~A 115 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNS 115 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 114689888773
No 314
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=43.00 E-value=29 Score=35.59 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=62.5
Q ss_pred CCCeEEEEecC-------ChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc
Q 014642 37 SKHQILLVGEG-------DFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH 109 (421)
Q Consensus 37 s~~rILLVGEG-------DFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~ 109 (421)
+..+||=||=| .. .|+.+++.+.....|++.-++... . ....++++ .--|++++..-
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG-~Sl~la~~~fP~a~V~GVDiSp~m----~----------~~~~rI~f-v~GDa~dlpf~ 279 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGG-GSLRMWKSFFPRGQIYGLDIMDKS----H----------VDELRIRT-IQGDQNDAEFL 279 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCC-HHHHHHHHHCTTCEEEEEESSCCG----G----------GCBTTEEE-EECCTTCHHHH
T ss_pred CCCEEEEEecCCCcCCCCCH-HHHHHHHHhCCCCEEEEEECCHHH----h----------hcCCCcEE-EEecccccchh
Confidence 35799999998 23 466777665345578887766431 1 11224444 45688876422
Q ss_pred cccc--cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 110 SELS--KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 110 ~~Lk--~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..+. ...||.||.|-=|. . .+ ...+|+.+..+|+|||.+.|.
T Consensus 280 ~~l~~~d~sFDlVisdgsH~-----------~-~d---~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGSHI-----------N-AH---VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHHHHHHCCEEEEEECSCCC-----------H-HH---HHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhcccCCccEEEECCccc-----------c-hh---HHHHHHHHHHhcCCCeEEEEE
Confidence 1111 47899999874332 0 01 246889999999999998885
No 315
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=42.75 E-value=41 Score=29.84 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=46.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccc-c
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSEL-S 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~L-k 113 (421)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++..+.+.+ +...++|++.|..+ .+.+|.++......+ .
T Consensus 20 ~~k~vlItGasgg-iG~~la~~l~~~G~~v~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGAGRG-IGRGIAIELGRRGASVVVNYGSSSKAA-------EEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEcCCchHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 3568999997654 334444433 12467888877544333 22345667666543 467888876542221 1
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 92 ~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHSCEEEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13689888764
No 316
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=42.45 E-value=34 Score=30.15 Aligned_cols=77 Identities=10% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|+++..+.. . .+...++|++.|.. ..+.+|.++......+
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 5 EKVALVTGASRG-IGFEVAHALASKGATVVGTATSQA-S-------AEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 467899985543 334444433 12568888877532 1 23345567776654 4567888886643222
Q ss_pred ---ccCcccEEEEc
Q 014642 113 ---SKRKFDRIIFN 123 (421)
Q Consensus 113 ---k~~~FDrIIFN 123 (421)
...+.|.||.|
T Consensus 76 ~~~~~~~id~li~~ 89 (247)
T 3lyl_A 76 IKAENLAIDILVNN 89 (247)
T ss_dssp HHHTTCCCSEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 12578988877
No 317
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=42.43 E-value=22 Score=34.16 Aligned_cols=82 Identities=21% Similarity=0.192 Sum_probs=50.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc-ccccC
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS-ELSKR 115 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~-~Lk~~ 115 (421)
++.+||=+|=|.=.+|..|++.++ +..|+|.-.| .+.+ + .++.|++... ..++++ .-|+..|.... .+...
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d-~~al-~---~A~~~~~~~g-~~v~~v-~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVD-SEVL-R---IAEEKLKEFS-DRVSLF-KVSYREADFLLKTLGIE 97 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESC-HHHH-H---HHHHHTGGGT-TTEEEE-ECCGGGHHHHHHHTTCS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECC-HHHH-H---HHHHHHHhcC-CcEEEE-ECCHHHHHHHHHhcCCC
Confidence 567899988888888999998874 4567665544 2322 2 2555554322 234444 44777764321 11125
Q ss_pred cccEEEEcCCC
Q 014642 116 KFDRIIFNFPH 126 (421)
Q Consensus 116 ~FDrIIFNFPH 126 (421)
.||.|++|.|.
T Consensus 98 ~~D~Vl~D~gv 108 (301)
T 1m6y_A 98 KVDGILMDLGV 108 (301)
T ss_dssp CEEEEEEECSC
T ss_pred CCCEEEEcCcc
Confidence 79999999984
No 318
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=41.59 E-value=84 Score=29.99 Aligned_cols=96 Identities=18% Similarity=0.252 Sum_probs=57.2
Q ss_pred cCCCCeEEEEe-cCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 35 YSSKHQILLVG-EGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 35 Yss~~rILLVG-EGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
..++++||+.| -|..- ++..||++.| .+|+||+ +.+ +++.++++|+......+..++.+.. .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~G--a~Vi~~~--~~~-----------~~~~~~~lGa~~v~~~~~~~~~~~~-~ 244 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVC--SQD-----------ASELVRKLGADDVIDYKSGSVEEQL-K 244 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEE--CGG-----------GHHHHHHTTCSEEEETTSSCHHHHH-H
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEe--ChH-----------HHHHHHHcCCCEEEECCchHHHHHH-h
Confidence 45678999999 67654 4555677765 4789886 221 1345678898765544332222110 1
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
....+|.||-+ +|. + . .-+..+..+|+++|.|.+
T Consensus 245 ~~~g~D~vid~---~g~---~-----~--------~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 245 SLKPFDFILDN---VGG---S-----T--------ETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp TSCCBSEEEES---SCT---T-----H--------HHHGGGGBCSSSCCEEEE
T ss_pred hcCCCCEEEEC---CCC---h-----h--------hhhHHHHHhhcCCcEEEE
Confidence 12469988654 342 1 0 124567788999998754
No 319
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=41.33 E-value=1e+02 Score=27.70 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=47.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++++.+ ..+.+|+.++..+.+. ....+++|++.|.. ..+.+|.++......+-
T Consensus 8 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 8 NRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEG-------AATAVAEIEKLGRSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHH-------HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 568999996653 344455443 1256788774443332 23345677776644 45678988876533221
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 80 ~~~~~g~id~lv~nA 94 (259)
T 3edm_A 80 AADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHCSEEEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 24789988874
No 320
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=40.87 E-value=35 Score=30.20 Aligned_cols=78 Identities=14% Similarity=0.256 Sum_probs=46.4
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+. -.-.+||+.+ ..+.+|+++..+. +. .+...++|++.|.. ..+.+|.++......+-
T Consensus 9 ~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 9 NKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINA-EA-------AEAVAKQIVADGGTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCH-HH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 56889998554 3344454443 1356788887753 22 23345566666654 45678888876432221
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 80 ~~~~~g~id~li~~A 94 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 24789998874
No 321
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=40.66 E-value=1.5e+02 Score=29.02 Aligned_cols=102 Identities=17% Similarity=0.091 Sum_probs=51.3
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhH
Q 014642 64 NICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHM 143 (421)
Q Consensus 64 nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr 143 (421)
.|++.-.| ..+.+ -|+.|++...-.+..-+..-|+.++.. ...||.||.|=|-.-..+ ..
T Consensus 259 ~V~GvDid--~~ai~---~Ar~Na~~~gl~~~i~~~~~D~~~l~~-----~~~~D~Iv~NPPyg~rl~----------~~ 318 (385)
T 3ldu_A 259 KIYGYDID--EESID---IARENAEIAGVDEYIEFNVGDATQFKS-----EDEFGFIITNPPYGERLE----------DK 318 (385)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHHTCGGGEEEEECCGGGCCC-----SCBSCEEEECCCCCCSHH----------HH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChhhcCc-----CCCCcEEEECCCCcCccC----------CH
Confidence 46655444 22322 366676544211223345567777643 257999999999543211 11
Q ss_pred HHHHHHHHhhHhccC--CCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 144 SLVEGFFRNASGMLR--PRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 144 ~LL~~FF~SA~~lL~--~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.-+..+++...++|+ ++|.+.|-..+.. +.+..|+...++.+
T Consensus 319 ~~l~~ly~~lg~~lk~~~g~~~~iit~~~~---------l~~~~g~~~~~~~~ 362 (385)
T 3ldu_A 319 DSVKQLYKELGYAFRKLKNWSYYLITSYED---------FEYEFGQKADKKRK 362 (385)
T ss_dssp HHHHHHHHHHHHHHHTSBSCEEEEEESCTT---------HHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEEEECCHH---------HHHhhCCCcccceE
Confidence 122333433333333 4777776654432 55555554444433
No 322
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=40.58 E-value=1.3e+02 Score=27.26 Aligned_cols=78 Identities=12% Similarity=0.159 Sum_probs=46.4
Q ss_pred CCCeEEEEecC-----ChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCcc
Q 014642 37 SKHQILLVGEG-----DFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEH 109 (421)
Q Consensus 37 s~~rILLVGEG-----DFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~ 109 (421)
+++.+|+.|=+ .+..++.|+++ +.+|+.+..+.+ .+ ++-.+.+++.| -...+.+|.++-.+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~-~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKER-SR-------KELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGG-GH-------HHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHH-HH-------HHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 35788999853 25555555553 568888877632 11 22234455543 234567899886654
Q ss_pred ccc------ccCcccEEEEcCC
Q 014642 110 SEL------SKRKFDRIIFNFP 125 (421)
Q Consensus 110 ~~L------k~~~FDrIIFNFP 125 (421)
..+ ...+.|.+|.|--
T Consensus 74 ~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 74 INGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEeccc
Confidence 322 2367999998843
No 323
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=40.36 E-value=19 Score=30.62 Aligned_cols=33 Identities=18% Similarity=0.364 Sum_probs=21.5
Q ss_pred CeEEEEecCChhHHHHHHHhhCCCCcEEeccccC
Q 014642 39 HQILLVGEGDFSFSFALSQKFGSASNICASSLDS 72 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS 72 (421)
.+||+.|=+.+ .-.+|++.+..+.+|++++.+.
T Consensus 4 M~vlVtGasg~-iG~~~~~~l~~g~~V~~~~r~~ 36 (202)
T 3d7l_A 4 MKILLIGASGT-LGSAVKERLEKKAEVITAGRHS 36 (202)
T ss_dssp CEEEEETTTSH-HHHHHHHHHTTTSEEEEEESSS
T ss_pred cEEEEEcCCcH-HHHHHHHHHHCCCeEEEEecCc
Confidence 47999996654 3455555443456788887764
No 324
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=39.97 E-value=51 Score=31.18 Aligned_cols=93 Identities=17% Similarity=0.294 Sum_probs=55.5
Q ss_pred cCCCCeEEEEe-cCChhH-HHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecc-cCCcCcc-c
Q 014642 35 YSSKHQILLVG-EGDFSF-SFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVD-ATEMKEH-S 110 (421)
Q Consensus 35 Yss~~rILLVG-EGDFSF-SlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVD-ATkL~~~-~ 110 (421)
..++++||++| -|..-- +..||++.| .+|+|| .+.+ .++.++++|+.. || ..++.+. .
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~G--a~Vi~~--~~~~-----------~~~~~~~lGa~~---i~~~~~~~~~~~ 209 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARG--ARVFAT--ARGS-----------DLEYVRDLGATP---IDASREPEDYAA 209 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEE--ECHH-----------HHHHHHHHTSEE---EETTSCHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC--CEEEEE--eCHH-----------HHHHHHHcCCCE---eccCCCHHHHHH
Confidence 45688999999 676544 344567665 489998 4432 245677789876 44 2222111 0
Q ss_pred -ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 111 -ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 111 -~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
...+..+|.|+=+ +|. ..+..+..+|+++|.|.+.
T Consensus 210 ~~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 210 EHTAGQGFDLVYDT---LGG------------------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp HHHTTSCEEEEEES---SCT------------------HHHHHHHHHEEEEEEEEES
T ss_pred HHhcCCCceEEEEC---CCc------------------HHHHHHHHHHhcCCeEEEE
Confidence 1123579976542 442 1345666789999987654
No 325
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=39.82 E-value=1.5e+02 Score=29.35 Aligned_cols=104 Identities=11% Similarity=0.035 Sum_probs=52.2
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHHHhH
Q 014642 64 NICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHM 143 (421)
Q Consensus 64 nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr 143 (421)
.|++.-.| ..+.+ -|..|++...-.+..-+..-|+.++.. ...||.||.|=|---..|. ...-.
T Consensus 265 ~V~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~~~~-----~~~fD~Iv~NPPYg~rl~~------~~~l~ 328 (393)
T 3k0b_A 265 NIIGGDID--ARLIE---IAKQNAVEAGLGDLITFRQLQVADFQT-----EDEYGVVVANPPYGERLED------EEAVR 328 (393)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHTTCTTCSEEEECCGGGCCC-----CCCSCEEEECCCCCCSHHH------HHHHH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHhCCC-----CCCCCEEEECCCCccccCC------chhHH
Confidence 35555444 33332 366676543222212355668877643 2479999999996332110 11122
Q ss_pred HHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEee
Q 014642 144 SLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQ 194 (421)
Q Consensus 144 ~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~ 194 (421)
.|...+-+..+. + ++|.+.|-.-+.. +.+..|+.-.++.+
T Consensus 329 ~ly~~lg~~lk~-~-~g~~~~iit~~~~---------l~~~~g~~~~~~~~ 368 (393)
T 3k0b_A 329 QLYREMGIVYKR-M-PTWSVYVLTSYEL---------FEEVYGKKATKKRK 368 (393)
T ss_dssp HHHHHHHHHHHT-C-TTCEEEEEECCTT---------HHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHhc-C-CCCEEEEEECCHH---------HHHHhCCCcccceE
Confidence 233333333333 2 4888777655443 55555555444433
No 326
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=38.94 E-value=47 Score=29.93 Aligned_cols=88 Identities=11% Similarity=0.146 Sum_probs=46.6
Q ss_pred cceeeeccCCCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCC
Q 014642 28 EEKWIMHYSSKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATE 105 (421)
Q Consensus 28 ~~K~i~~Yss~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATk 105 (421)
+..+....++.++||+.|=+. -.-++||+.+ ..+.+|+.+.-.+.+.+ +...+.+++.|..+ .+.+|.++
T Consensus 16 ~n~~~~~m~~~k~vlITGas~-gIG~a~a~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~ 87 (272)
T 4e3z_A 16 ENLYFQSMSDTPVVLVTGGSR-GIGAAVCRLAARQGWRVGVNYAANREAA-------DAVVAAITESGGEAVAIPGDVGN 87 (272)
T ss_dssp --------CCSCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTC
T ss_pred hhhhhhhccCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCChhHH-------HHHHHHHHhcCCcEEEEEcCCCC
Confidence 334444555667899988554 3455555544 23567766644444332 22345566666554 56778888
Q ss_pred cCcccccc------cCcccEEEEc
Q 014642 106 MKEHSELS------KRKFDRIIFN 123 (421)
Q Consensus 106 L~~~~~Lk------~~~FDrIIFN 123 (421)
......+- ..+.|.||.|
T Consensus 88 ~~~v~~~~~~~~~~~g~id~li~n 111 (272)
T 4e3z_A 88 AADIAAMFSAVDRQFGRLDGLVNN 111 (272)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEC
Confidence 65432221 1478988877
No 327
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=38.56 E-value=47 Score=31.31 Aligned_cols=96 Identities=18% Similarity=0.303 Sum_probs=56.4
Q ss_pred CCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccc-c
Q 014642 37 SKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SEL-S 113 (421)
Q Consensus 37 s~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~L-k 113 (421)
++++||++|=|..- .+..||++.| ..+|+||..+.+ .++.++++|+....+.+..++.+. ..+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~------------~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSDF------------RRELAKKVGADYVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHH------------HHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHH------------HHHHHHHhCCCEEECCCCcCHHHHHHHHcC
Confidence 67899999987543 3444567665 337998876521 244566778865544333332211 011 2
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
+..+|.||-+ +|. ...+..+.++|+++|.|.+
T Consensus 234 g~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 234 GNGVDVFLEF---SGA-----------------PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp TSCEEEEEEC---SCC-----------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEE
Confidence 3469988754 332 1235666778899997654
No 328
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=38.12 E-value=43 Score=31.20 Aligned_cols=95 Identities=23% Similarity=0.291 Sum_probs=53.8
Q ss_pred CCCC-eEEEEec-CChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc
Q 014642 36 SSKH-QILLVGE-GDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL 112 (421)
Q Consensus 36 ss~~-rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L 112 (421)
..++ +||++|= |..- ++..||++.| ..+++|+...+ .++.++++|+...++.+-..-.....+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~------------~~~~~~~lGa~~v~~~~~~~~~~~~~~ 213 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNRE------------AADYLKQLGASEVISREDVYDGTLKAL 213 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSS------------THHHHHHHTCSEEEEHHHHCSSCCCSS
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEEECCCchHHHHHHh
Confidence 3444 8999997 7664 4555677776 36888776421 234555678765544321110111122
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
....+|.||-+ +|. + -+..+.++|+++|.|.+
T Consensus 214 ~~~~~d~vid~---~g~---~---------------~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 214 SKQQWQGAVDP---VGG---K---------------QLASLLSKIQYGGSVAV 245 (330)
T ss_dssp CCCCEEEEEES---CCT---H---------------HHHHHHTTEEEEEEEEE
T ss_pred hcCCccEEEEC---CcH---H---------------HHHHHHHhhcCCCEEEE
Confidence 33568877643 342 1 14456778999998754
No 329
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=37.36 E-value=31 Score=32.16 Aligned_cols=93 Identities=22% Similarity=0.301 Sum_probs=53.3
Q ss_pred CCCC-eEEEEec-CChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcC-c-cc
Q 014642 36 SSKH-QILLVGE-GDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMK-E-HS 110 (421)
Q Consensus 36 ss~~-rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~-~-~~ 110 (421)
..++ +||++|- |..- ++..||++.| .++++|+-..+ .++.++++|+....+. ++.. + ..
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~------------~~~~~~~lGa~~~i~~--~~~~~~~~~ 210 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKRG--YTVEASTGKAA------------EHDYLRVLGAKEVLAR--EDVMAERIR 210 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCTT------------CHHHHHHTTCSEEEEC--C--------
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHCC--CEEEEEECCHH------------HHHHHHHcCCcEEEec--CCcHHHHHH
Confidence 3444 8999997 7654 4555677776 36888876421 2445667888655433 2221 1 11
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
.+....+|.||-+ +|. + -+..+.++|+++|.|.+
T Consensus 211 ~~~~~~~d~vid~---~g~---~---------------~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 211 PLDKQRWAAAVDP---VGG---R---------------TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp -CCSCCEEEEEEC---STT---T---------------THHHHHHTEEEEEEEEE
T ss_pred HhcCCcccEEEEC---CcH---H---------------HHHHHHHhhccCCEEEE
Confidence 2234578987654 342 1 14456678899998754
No 330
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=37.11 E-value=46 Score=29.94 Aligned_cols=79 Identities=16% Similarity=0.275 Sum_probs=47.4
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCc-Cccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEM-KEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL-~~~~~L 112 (421)
.+++||+.|=+.+ .-+++|+.+ ..+.+|++++.+.. ...+.+++|++.+ -...+.+|.++. .....+
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVT--------KGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 3568899986543 334444433 13568999988742 1234466777664 346678899987 432222
Q ss_pred ------ccCcccEEEEcC
Q 014642 113 ------SKRKFDRIIFNF 124 (421)
Q Consensus 113 ------k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 82 ~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHSSCCEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 125799888874
No 331
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=37.05 E-value=46 Score=30.54 Aligned_cols=83 Identities=7% Similarity=0.091 Sum_probs=53.2
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDC 192 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~ 192 (421)
...+||.|+.+=|---....-+.......-..++...+..+..+|+++|.|.|.+.+ +..-.+..+..+.|+.+...
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d---~~~~~~~~~~~~~gf~~~~~ 96 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP---FNCAFICQYLVSKGMIFQNW 96 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH---HHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc---HHHHHHHHHHHhhccceeEE
Confidence 346899999999975320000000012233457788888889999999999998732 22223444566789988887
Q ss_pred eeCCCC
Q 014642 193 VQFRKE 198 (421)
Q Consensus 193 ~~F~~~ 198 (421)
......
T Consensus 97 iiW~K~ 102 (260)
T 1g60_A 97 ITWDKR 102 (260)
T ss_dssp EEECCC
T ss_pred EEEEec
Confidence 766654
No 332
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=36.88 E-value=14 Score=36.14 Aligned_cols=43 Identities=12% Similarity=0.052 Sum_probs=27.6
Q ss_pred HHHHHHhCCCEEEeecccCCcCccc-cc------------ccCcccEEEEcCCCCC
Q 014642 86 NLDTLKKLGASIIHGVDATEMKEHS-EL------------SKRKFDRIIFNFPHAG 128 (421)
Q Consensus 86 Nl~~Lr~~Gv~VlhgVDATkL~~~~-~L------------k~~~FDrIIFNFPH~G 128 (421)
-.+.|++.|++|+.+...+++.... .+ ..-.+|.|++=-|..|
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 3467899999999876665554321 01 1246899998666555
No 333
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=36.76 E-value=63 Score=30.75 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=55.2
Q ss_pred CCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
+++||++|=|..- ++..||++.| .+|++|+.+..+ .++++.++++|+... + +. ++.+...-....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~---------~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPT---------EVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCC---------HHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccc---------hHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCC
Confidence 7899999976653 3444567765 389999775410 123455667788765 3 22 222110001256
Q ss_pred ccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHH-HhhHhccCCCCeEEEE
Q 014642 117 FDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFF-RNASGMLRPRGEVHVS 166 (421)
Q Consensus 117 FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF-~SA~~lL~~~GeIHVT 166 (421)
+|.||-+- |. . ..+ +.+.++|+++|.|.+.
T Consensus 247 ~d~vid~~---g~---~--------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 247 FDVIIDAT---GA---D--------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEEEECC---CC---C--------------THHHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECC---CC---h--------------HHHHHHHHHHHhcCCEEEEE
Confidence 99887653 32 1 023 6677888999986543
No 334
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=35.86 E-value=52 Score=25.88 Aligned_cols=74 Identities=20% Similarity=0.354 Sum_probs=39.9
Q ss_pred CCeEEEEecCChhHHHHHH-HhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALS-QKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
.++|+++|=|..-..++.. ... +..+++...+. + .++.+++.|..++. .|.++......+....
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~-~-----------~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE-E-----------KVNAYASYATHAVI-ANATEENELLSLGIRN 70 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH-H-----------HHHTTTTTCSEEEE-CCTTCHHHHHTTTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH-H-----------HHHHHHHhCCEEEE-eCCCCHHHHHhcCCCC
Confidence 4579999987665544432 222 34566654431 1 23445566776543 4555432211112356
Q ss_pred ccEEEEcCCC
Q 014642 117 FDRIIFNFPH 126 (421)
Q Consensus 117 FDrIIFNFPH 126 (421)
.|.||..-|.
T Consensus 71 ~d~vi~~~~~ 80 (144)
T 2hmt_A 71 FEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEECCCC
Confidence 8999987653
No 335
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=35.61 E-value=68 Score=28.67 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=45.3
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk-- 113 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .....++|++.|..+ .+.+|.++......+-
T Consensus 9 ~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 9 GCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQ-KE-------LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 568999986653 233444333 1256788887753 22 223355666667654 4567888765432221
Q ss_pred ----c-CcccEEEEcC
Q 014642 114 ----K-RKFDRIIFNF 124 (421)
Q Consensus 114 ----~-~~FDrIIFNF 124 (421)
. .+.|.+|.|=
T Consensus 80 ~~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 80 VANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHHTTTCCCEEEECC
T ss_pred HHHHcCCCCCEEEECC
Confidence 1 5789988873
No 336
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=35.30 E-value=38 Score=30.43 Aligned_cols=78 Identities=14% Similarity=0.207 Sum_probs=47.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-++||+.+ ..+.+|++++.+. +. .+...++|++.|.. ..+.+|.++......+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 29 GQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDV-EK-------LRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCH-HH-------HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 568899985543 455555544 2356799887763 22 23345567766655 4567898887654322
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 100 ~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 125789988874
No 337
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=35.27 E-value=65 Score=30.52 Aligned_cols=96 Identities=17% Similarity=0.288 Sum_probs=57.1
Q ss_pred CeEEEEecCChh-HH-HHHH-HhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 39 HQILLVGEGDFS-FS-FALS-QKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 39 ~rILLVGEGDFS-FS-lSLa-~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
++||++|=|..- ++ ..|| ++.| ..+|+||+.+.+.. ..++.++++|+... +.+..++.+-..+ ..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~~---------~~~~~~~~lGa~~v-~~~~~~~~~i~~~-~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRPD---------PTIDIIEELDATYV-DSRQTPVEDVPDV-YE 241 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSSC---------HHHHHHHHTTCEEE-ETTTSCGGGHHHH-SC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCcccH---------HHHHHHHHcCCccc-CCCccCHHHHHHh-CC
Confidence 899999987644 44 5667 7665 33499998754200 12456778898766 4433333221112 23
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.+|.||=. +|. . ..+..+.++|+++|.|.+.
T Consensus 242 g~Dvvid~---~g~---~--------------~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEA---TGF---P--------------KHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEEC---SCC---H--------------HHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEEC---CCC---h--------------HHHHHHHHHHhcCCEEEEE
Confidence 78887643 342 0 2356677889999987553
No 338
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.18 E-value=41 Score=30.42 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=46.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+. +. .....++|++.|.. ..+.+|.++......+
T Consensus 31 ~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 31 GEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINK-HG-------LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCH-HH-------HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence 468999996654 445555443 1256788887753 22 22334566666644 4567888876543221
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
....+|.||.|=
T Consensus 102 ~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 102 VKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHTCCCSEEEECC
T ss_pred HHHHCCCCcEEEECC
Confidence 124789988874
No 339
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=34.75 E-value=1.2e+02 Score=26.57 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=45.7
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-c-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-S- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-k- 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++..+.+.+ ....++|+..|.. ..+.+|.++......+ .
T Consensus 7 ~k~vlITGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVVITGSSTG-LGKSMAIRFATEKAKVVVNYRSKEDEA-------NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEcCCChHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 467899986543 244444433 12467888887444332 2334556666655 3567888876543221 1
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 79 ~~~~~g~id~li~~A 93 (261)
T 1gee_A 79 AIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 14789998874
No 340
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=34.18 E-value=64 Score=30.99 Aligned_cols=111 Identities=16% Similarity=0.234 Sum_probs=60.4
Q ss_pred ccCCCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcC---cc
Q 014642 34 HYSSKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMK---EH 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~---~~ 109 (421)
...++++||++|=|.. .++..||++.| +..|+++.... +.++.++++|+.+ ||.++-. +.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~---i~~~~~~~~~~~ 245 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNP------------ARLAHAKAQGFEI---ADLSLDTPLHEQ 245 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCEE---EETTSSSCHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCH------------HHHHHHHHcCCcE---EccCCcchHHHH
Confidence 3467899999997764 46677788876 44688885532 2466778899973 4443311 11
Q ss_pred -ccc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 110 -SEL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 110 -~~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..+ .+..+|.||=.- |........ .-.|..--..-+..+.++|+++|.|.+
T Consensus 246 v~~~t~g~g~Dvvid~~---G~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 246 IAALLGEPEVDCAVDAV---GFEARGHGH--EGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp HHHHHSSSCEEEEEECC---CTTCBCSST--TGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHhCCCCCCEEEECC---CCccccccc--ccccccchHHHHHHHHHHHhcCCEEEE
Confidence 111 234699876532 321000000 000000001235667789999998754
No 341
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=34.06 E-value=9.6 Score=34.44 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=64.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=+|=|.=.++..|++.. .+++|.-.|..- ...+..|+. ...+++++ .-|+.++... ...
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~-----~~~a~~~~~--~~~~v~~~-~~D~~~~~~~---~~~ 93 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHL-----FNLSSEKLK--LNTRVTLI-HQDILQFQFP---NKQ 93 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSS-----SSSSSCTTT--TCSEEEEC-CSCCTTTTCC---CSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHH-----HHHHHHHhc--cCCceEEE-ECChhhcCcc---cCC
Confidence 456789999988888888888763 578888776421 111222332 11234444 4488776421 135
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHH------HHH----HhhHhccCCCCeEEEEe
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVE------GFF----RNASGMLRPRGEVHVSH 167 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~------~FF----~SA~~lL~~~GeIHVTL 167 (421)
.| .||.|.|.... . .+ -..++. .+| +.|..+|+++|.+.|..
T Consensus 94 ~f-~vv~n~Py~~~---~----~~--~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 94 RY-KIVGNIPYHLS---T----QI--IKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EE-EEEEECCSSSC---H----HH--HHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred Cc-EEEEeCCcccc---H----HH--HHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 78 89999998763 1 11 122221 233 55778888888765543
No 342
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=33.29 E-value=1.2e+02 Score=27.66 Aligned_cols=79 Identities=18% Similarity=0.286 Sum_probs=48.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+ +..+++|+..|.. ..+.+|.++......+-
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGV-------APVIAELSGLGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHH-------HHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 567899986543 334444443 13568888876555433 2345667776654 45678999876543321
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 101 ~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 101 VVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHSCCCEEEEEC
T ss_pred HHHHcCCCCEEEECC
Confidence 24789999884
No 343
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=33.10 E-value=50 Score=30.90 Aligned_cols=97 Identities=16% Similarity=0.283 Sum_probs=55.4
Q ss_pred ccCCCCeEEEEec-CChhHHHH-HHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-c
Q 014642 34 HYSSKHQILLVGE-GDFSFSFA-LSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-S 110 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDFSFSlS-La~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~ 110 (421)
...++++||++|= |..--+.+ +++..| .+|++|+.+.+ .++.++++|+.....++..++.+. .
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~Vi~~~~~~~------------~~~~~~~~g~~~~~d~~~~~~~~~i~ 207 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHLG--ATVIGTVSTEE------------KAETARKLGCHHTINYSTQDFAEVVR 207 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCCEEEECCCHHHHHHHH
Confidence 3456789999994 77655443 356654 48999876531 133445567765544332222111 0
Q ss_pred c-cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 111 E-LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 111 ~-Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. .....+|.||-| +|. + .+..+.++|+++|.|.+
T Consensus 208 ~~~~~~~~d~vi~~---~g~---~---------------~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 208 EITGGKGVDVVYDS---IGK---D---------------TLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp HHHTTCCEEEEEEC---SCT---T---------------THHHHHHTEEEEEEEEE
T ss_pred HHhCCCCCeEEEEC---CcH---H---------------HHHHHHHhhccCCEEEE
Confidence 1 123469988865 342 1 24556778999997644
No 344
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=32.88 E-value=43 Score=31.60 Aligned_cols=46 Identities=22% Similarity=0.344 Sum_probs=31.5
Q ss_pred cCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCC
Q 014642 114 KRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTA 171 (421)
Q Consensus 114 ~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~ 171 (421)
...||.|+... + .|..........++.....|+|||.+.+.+.++.
T Consensus 211 ~~~fDlI~crn--v----------liyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~~ 256 (274)
T 1af7_A 211 PGPFDAIFCRN--V----------MIYFDKTTQEDILRRFVPLLKPDGLLFAGHSENF 256 (274)
T ss_dssp CCCEEEEEECS--S----------GGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCCC
T ss_pred CCCeeEEEECC--c----------hHhCCHHHHHHHHHHHHHHhCCCcEEEEEecccc
Confidence 35799999842 1 1222334446677777889999999999777654
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=32.80 E-value=73 Score=29.64 Aligned_cols=95 Identities=14% Similarity=0.250 Sum_probs=54.6
Q ss_pred ccCCCCeEEEEec-CChhHHHH-HHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc---
Q 014642 34 HYSSKHQILLVGE-GDFSFSFA-LSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE--- 108 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDFSFSlS-La~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~--- 108 (421)
....+++||++|= |..-.+.+ +++..| .+|++++.+. + .++.++++|+.... |.++...
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~--d~~~~~~~~~ 205 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSD-E-----------KIAYLKQIGFDAAF--NYKTVNSLEE 205 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSH-H-----------HHHHHHHTTCSEEE--ETTSCSCHHH
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCH-H-----------HHHHHHhcCCcEEE--ecCCHHHHHH
Confidence 3456789999997 65544333 345554 4899887642 1 23345667875443 4443111
Q ss_pred c-cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 109 H-SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 109 ~-~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. ..+....+|.||-|- |. ..+..+.++|+++|.|.+
T Consensus 206 ~~~~~~~~~~d~vi~~~---g~------------------~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNV---GG------------------EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp HHHHHCTTCEEEEEESS---CH------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhCCCCeEEEECC---Ch------------------HHHHHHHHHHhcCCEEEE
Confidence 1 011124799888663 31 124567788999998754
No 346
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=32.74 E-value=37 Score=32.28 Aligned_cols=97 Identities=15% Similarity=0.244 Sum_probs=57.4
Q ss_pred cCCCCeEEEE-ecCChhHHHH-HHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 35 YSSKHQILLV-GEGDFSFSFA-LSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 35 Yss~~rILLV-GEGDFSFSlS-La~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
..++++||+. |-|..--+.+ +|+..| .+|++|+.+.+ .++.++++|+......+..++.+. ..
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTG------------KCEACERLGAKRGINYRSEDFAAVIKA 230 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCCEEEeCCchHHHHHHHH
Confidence 4567899999 5676654443 456664 47999876531 244566678876554433332221 11
Q ss_pred cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 112 LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 112 Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+....+|.||=+ +|. + .+..+..+|+++|.|.+.
T Consensus 231 ~~~~g~Dvvid~---~g~---~---------------~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 231 ETGQGVDIILDM---IGA---A---------------YFERNIASLAKDGCLSII 264 (353)
T ss_dssp HHSSCEEEEEES---CCG---G---------------GHHHHHHTEEEEEEEEEC
T ss_pred HhCCCceEEEEC---CCH---H---------------HHHHHHHHhccCCEEEEE
Confidence 124679977653 342 1 245567789999986554
No 347
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=32.04 E-value=47 Score=33.47 Aligned_cols=65 Identities=15% Similarity=0.312 Sum_probs=35.8
Q ss_pred cCCCCeEEEEecCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHH-HHHhCC---CEEEeecccCCcC
Q 014642 35 YSSKHQILLVGEGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLD-TLKKLG---ASIIHGVDATEMK 107 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~-~Lr~~G---v~VlhgVDATkL~ 107 (421)
+-.+.++++.||++..++++- .+.+|-..-.++|...+.+ |. +-++ .|+..| +.|+.+.|...|.
T Consensus 309 ~l~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~-----~~---~~~~~ll~~~~~~~~~v~~~~d~~~l~ 378 (458)
T 1mio_B 309 YLQGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMK-----FQ---KEIDAMLAEAGIEGSKVKVEGDFFDVH 378 (458)
T ss_dssp HHTTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHH-----HH---HHHHHHHHTTTCCSCEEEESCBHHHHH
T ss_pred HcCCCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHH-----HH---HHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence 336789999999987776652 2445432223334433322 21 1222 244433 5788877776654
No 348
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=32.01 E-value=1.1e+02 Score=33.13 Aligned_cols=84 Identities=11% Similarity=0.194 Sum_probs=52.0
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhC--C-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eecccCCcCcc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFG--S-ASNICASSLDSYETVVKKFKEARSNLDTLKKLGASII-HGVDATEMKEH 109 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~g--s-~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vl-hgVDATkL~~~ 109 (421)
.++++..+|++|=+ =-.-+++|+.+- . +.+|+.++..... -+.+++.+++|++.|++|. +.+|+++....
T Consensus 526 ~~~~~~~~lItGg~-~GlG~aiA~~la~~~Ga~~vvl~~R~~~~-----~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v 599 (795)
T 3slk_A 526 VWDAAGTVLVTGGT-GALGAEVARHLVIERGVRNLVLVSRRGPA-----ASGAAELVAQLTAYGAEVSLQACDVADRETL 599 (795)
T ss_dssp CCCTTSEEEEETTT-SHHHHHHHHHHHHTSSCCEEEEEESSGGG-----STTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred ccccccceeeccCC-CCcHHHHHHHHHHHcCCcEEEEeccCccc-----hHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence 36778899999843 234444544431 2 3478888886321 1235567889999998764 57899886543
Q ss_pred ccc-----ccCcccEEEEc
Q 014642 110 SEL-----SKRKFDRIIFN 123 (421)
Q Consensus 110 ~~L-----k~~~FDrIIFN 123 (421)
..+ ...+.|.||-|
T Consensus 600 ~~~~~~~~~~~~id~lVnn 618 (795)
T 3slk_A 600 AKVLASIPDEHPLTAVVHA 618 (795)
T ss_dssp HHHHHTSCTTSCEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEC
Confidence 221 11267877766
No 349
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=31.19 E-value=74 Score=30.16 Aligned_cols=93 Identities=16% Similarity=0.235 Sum_probs=59.5
Q ss_pred CeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCccc
Q 014642 39 HQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKFD 118 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~FD 118 (421)
++||++||..=.++.+|+. ....++..++.+...+. .|+ |..|.++.+.... ....||
T Consensus 21 ~~~l~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~~~~~~------~~~~~~ 78 (343)
T 2pjd_A 21 SRILFAGDLQDDLPARLDT---AASRAHTQQFHHWQVLS-------RQM------GDNARFSLVATAD------DVADCD 78 (343)
T ss_dssp CEEEEEECCCSSHHHHSCC---SEEEEEESBHHHHHHHH-------HHH------GGGEEECSSCCHH------HHTTCS
T ss_pred CeEEEEcCCCChhhhhhhh---CCCEEEECCHHHHHHHH-------hhc------CCceEeccCCCcc------ccCCCC
Confidence 5899999998777777752 12334444444433332 122 7777777654321 123589
Q ss_pred EEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEec
Q 014642 119 RIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHK 168 (421)
Q Consensus 119 rIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk 168 (421)
.|+.-.|-. +.++..-+..+...+.++++|.+.=.
T Consensus 79 ~~~~~~pk~---------------~~~~~~~l~~~~~~~~~~~~~~~~g~ 113 (343)
T 2pjd_A 79 TLIYYWPKN---------------KPEAQFQLMNLLSLLPVGTDIFVVGE 113 (343)
T ss_dssp EEEEECCSS---------------HHHHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred EEEEECCCC---------------hHHHHHHHHHHHHhCCCCCEEEEEEe
Confidence 999988853 34555667778889999999988653
No 350
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=31.18 E-value=64 Score=29.09 Aligned_cols=79 Identities=13% Similarity=0.165 Sum_probs=47.7
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-++||+.+ ..+.+|++++.++.+.+ +...+.+++.|.. ..+.+|.++......+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 100 (271)
T 4iin_A 29 GKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVA-------DALKNELEEKGYKAAVIKFDAASESDFIEAIQT 100 (271)
T ss_dssp CCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 568899986653 344454443 23568988888665432 2234456666644 4567888886643222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 101 ~~~~~g~id~li~nA 115 (271)
T 4iin_A 101 IVQSDGGLSYLVNNA 115 (271)
T ss_dssp HHHHHSSCCEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 125789998884
No 351
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.16 E-value=2.1e+02 Score=25.56 Aligned_cols=79 Identities=15% Similarity=0.262 Sum_probs=47.8
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc--
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-- 112 (421)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+.++.+. +. .++..++|++.|.. ..+.+|.++......+
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTV-ER-------LEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD 80 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4578999997653 334444433 1256788887752 22 23345667776654 4567899887654322
Q ss_pred ----ccCcccEEEEcC
Q 014642 113 ----SKRKFDRIIFNF 124 (421)
Q Consensus 113 ----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 81 ~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 81 ETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHHcCCCcEEEECC
Confidence 125789999884
No 352
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=31.02 E-value=1.3e+02 Score=27.14 Aligned_cols=78 Identities=14% Similarity=0.300 Sum_probs=43.3
Q ss_pred CCeEEEEecC-ChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCccccc--
Q 014642 38 KHQILLVGEG-DFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 38 ~~rILLVGEG-DFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~L-- 112 (421)
+++||+.|=+ +=-.-+++++.+ ..+.+|++++.+.. + .+.+++|++ .|....+.+|.++......+
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES--L-------EKRVRPIAQELNSPYVYELDVSKEEHFKSLYN 76 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT--T-------HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH--H-------HHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHH
Confidence 4689999964 111334444433 23567888887642 1 123444443 24335567888876543222
Q ss_pred ----ccCcccEEEEcC
Q 014642 113 ----SKRKFDRIIFNF 124 (421)
Q Consensus 113 ----k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 77 ~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHTSCEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124789988874
No 353
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=30.92 E-value=83 Score=28.24 Aligned_cols=78 Identities=17% Similarity=0.362 Sum_probs=47.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|++++.+.. ..+...++|++.|.. ..+.+|.++......+-
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGE--------KLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHH
Confidence 567899987653 344555443 13568888877532 123345567776765 45678988876543221
Q ss_pred ---cCcccEEEEcC
Q 014642 114 ---KRKFDRIIFNF 124 (421)
Q Consensus 114 ---~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 78 ~~~~g~id~lv~nA 91 (252)
T 3h7a_A 78 ADAHAPLEVTIFNV 91 (252)
T ss_dssp HHHHSCEEEEEECC
T ss_pred HHhhCCceEEEECC
Confidence 15789888873
No 354
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=30.77 E-value=42 Score=31.60 Aligned_cols=96 Identities=15% Similarity=0.262 Sum_probs=54.6
Q ss_pred cCCCCeEEEEec-CChhH-HHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 35 YSSKHQILLVGE-GDFSF-SFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 35 Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
..++++||++|- |..-- +..++++.| .+|++|..+.+ .++.++++|+....+.+..++.+. ..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~------------~~~~~~~~ga~~~~d~~~~~~~~~~~~ 229 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSED------------KLRRAKALGADETVNYTHPDWPKEVRR 229 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEEEETTSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHhcCCCEEEcCCcccHHHHHHH
Confidence 456789999998 66544 444566665 48999876421 233445568765433322221111 01
Q ss_pred c-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 112 L-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 112 L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
+ ....+|.||-+-. + . .+..+.++|+++|.|.+
T Consensus 230 ~~~~~~~d~vi~~~g--~---~----------------~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 230 LTGGKGADKVVDHTG--A---L----------------YFEGVIKATANGGRIAI 263 (343)
T ss_dssp HTTTTCEEEEEESSC--S---S----------------SHHHHHHHEEEEEEEEE
T ss_pred HhCCCCceEEEECCC--H---H----------------HHHHHHHhhccCCEEEE
Confidence 1 2357999887643 1 1 14556678889997654
No 355
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=30.70 E-value=79 Score=28.30 Aligned_cols=75 Identities=15% Similarity=0.322 Sum_probs=42.0
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-CCEEEeecccCCcCcccc
Q 014642 38 KHQILLVGEG---DF--SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKL-GASIIHGVDATEMKEHSE 111 (421)
Q Consensus 38 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-Gv~VlhgVDATkL~~~~~ 111 (421)
+++||+.|=+ .. ..+..|++. +.+|++++.+. .+ .+.+++|.+. |....+.+|.++......
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~--~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 76 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQND--KL-------KGRVEEFAAQLGSDIVLQCDVAEDASIDT 76 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESST--TT-------HHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEcCcH--HH-------HHHHHHHHHhcCCcEEEEccCCCHHHHHH
Confidence 4679999964 33 333333332 56788887764 11 1234444432 333567789888654322
Q ss_pred c------ccCcccEEEEcC
Q 014642 112 L------SKRKFDRIIFNF 124 (421)
Q Consensus 112 L------k~~~FDrIIFNF 124 (421)
+ ...+.|.||.|=
T Consensus 77 ~~~~~~~~~g~iD~lv~~A 95 (265)
T 1qsg_A 77 MFAELGKVWPKFDGFVHSI 95 (265)
T ss_dssp HHHHHHTTCSSEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 124689888874
No 356
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=30.59 E-value=71 Score=29.53 Aligned_cols=90 Identities=24% Similarity=0.294 Sum_probs=55.4
Q ss_pred eEEEEec-CCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 40 QILLVGE-GDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 40 rILLVGE-GDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
+||+.|- |.. .++..||++.| .+|+||+-..+ +++.++++|+...++. ++......+....+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~vi~~--~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRES------------THGYLKSLGANRILSR--DEFAESRPLEKQLW 212 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGG------------GHHHHHHHTCSEEEEG--GGSSCCCSSCCCCE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCCEEEec--CCHHHHHhhcCCCc
Confidence 4999997 655 45556678775 37999875421 3456667788655433 33222223445678
Q ss_pred cEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 118 DRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 118 DrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
|.| |+. +|. ..+..+.++|+++|.|.+.
T Consensus 213 d~v-~d~--~g~------------------~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 213 AGA-IDT--VGD------------------KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp EEE-EES--SCH------------------HHHHHHHHTEEEEEEEEEC
T ss_pred cEE-EEC--CCc------------------HHHHHHHHHHhcCCEEEEE
Confidence 865 553 441 1356677899999987654
No 357
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=30.53 E-value=2e+02 Score=25.95 Aligned_cols=75 Identities=11% Similarity=0.259 Sum_probs=42.7
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccc
Q 014642 38 KHQILLVGEG---DF--SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 38 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~ 111 (421)
+++||+.|=+ .. ..+..|++. +.+|++++.+.. + .+.+++|++ .|....+.+|.++......
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE---GAQLAFTYATPK--L-------EKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT---TCEEEEEESSGG--G-------HHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCHH--H-------HHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 5689999964 32 333334432 567888877642 1 123444543 2433556788887654322
Q ss_pred c------ccCcccEEEEcC
Q 014642 112 L------SKRKFDRIIFNF 124 (421)
Q Consensus 112 L------k~~~FDrIIFNF 124 (421)
+ ...+.|.||.|=
T Consensus 89 ~~~~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 2 124789998874
No 358
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=30.42 E-value=48 Score=29.47 Aligned_cols=78 Identities=22% Similarity=0.261 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-c-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-S- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-k- 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+. +.+ +..+++|++.|.. ..+.+|.++......+ .
T Consensus 14 ~k~vlITGasgg-iG~~la~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (266)
T 1xq1_A 14 AKTVLVTGGTKG-IGHAIVEEFAGFGAVIHTCARNE-YEL-------NECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84 (266)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 467999987664 344444443 1246788887653 222 2335566666644 3456788775432222 1
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
..+.|.||.|=
T Consensus 85 ~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 85 VSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHTTCCSEEEEEC
T ss_pred HHHHhCCCCcEEEECC
Confidence 15689999884
No 359
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.41 E-value=51 Score=30.12 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=47.1
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ --+++|+.+ ..+.+|+.+..+. + ..+..+++|++.|.. ..+.+|.++......+
T Consensus 26 gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~-~-------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 96 (271)
T 4ibo_A 26 GRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDP-S-------RVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR 96 (271)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCH-H-------HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH-H-------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 568888885542 334444443 1356888887653 2 233456777777654 4567788887653222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 97 ~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 97 LDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHTCCCCEEEECC
T ss_pred HHHHCCCCCEEEECC
Confidence 124789988873
No 360
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=30.18 E-value=78 Score=29.29 Aligned_cols=79 Identities=15% Similarity=0.192 Sum_probs=48.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS- 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk- 113 (421)
++++||+.|=+.+ .-++||+.+ ..+.+|++++.+. +. .+...++|+..|.. ..+.+|.++......+-
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQ-PA-------LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCH-HH-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 3568999997653 344555443 1356888888763 22 23345667776654 45678998876543221
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 101 ~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 101 EAFRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHHHSSCSEEEECC
T ss_pred HHHHhCCCCCEEEECC
Confidence 24789888873
No 361
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=30.06 E-value=38 Score=31.92 Aligned_cols=70 Identities=14% Similarity=0.306 Sum_probs=43.5
Q ss_pred CCeEEEEecCChhHHHHHHHhhC-CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFG-SASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~g-s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
..+|+++|-|.+. ..+++.+. .+. +++...|. +.++ |++.|+.+++| |+++...-....-..
T Consensus 115 ~~~viI~G~G~~g--~~l~~~L~~~g~-v~vid~~~------------~~~~-~~~~~~~~i~g-d~~~~~~L~~a~i~~ 177 (336)
T 1lnq_A 115 SRHVVICGWSEST--LECLRELRGSEV-FVLAEDEN------------VRKK-VLRSGANFVHG-DPTRVSDLEKANVRG 177 (336)
T ss_dssp -CEEEEESCCHHH--HHHHTTGGGSCE-EEEESCGG------------GHHH-HHHTTCEEEES-CTTSHHHHHHTCSTT
T ss_pred cCCEEEECCcHHH--HHHHHHHHhCCc-EEEEeCCh------------hhhh-HHhCCcEEEEe-CCCCHHHHHhcChhh
Confidence 5689999998765 55666552 233 55543332 1244 56689999887 888765432233467
Q ss_pred ccEEEEcC
Q 014642 117 FDRIIFNF 124 (421)
Q Consensus 117 FDrIIFNF 124 (421)
.|.||---
T Consensus 178 a~~vi~~~ 185 (336)
T 1lnq_A 178 ARAVIVDL 185 (336)
T ss_dssp EEEEEECC
T ss_pred ccEEEEcC
Confidence 88888743
No 362
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=29.97 E-value=69 Score=31.36 Aligned_cols=53 Identities=15% Similarity=0.294 Sum_probs=34.0
Q ss_pred ccCCCCeEEEEec-CChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEee
Q 014642 34 HYSSKHQILLVGE-GDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHG 100 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vlhg 100 (421)
....+++||+.|- |..- .+..||++.| .++++|.. +.+ .++.++++|+.....
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~-~~~-----------~~~~~~~lGa~~~i~ 271 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVS-SAQ-----------KEAAVRALGCDLVIN 271 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SHH-----------HHHHHHHTTCCCEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeC-CHH-----------HHHHHHhcCCCEEEe
Confidence 3456889999997 7654 3445567664 47787763 322 345667889865543
No 363
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=29.78 E-value=74 Score=29.72 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=55.9
Q ss_pred cCCCCeEEEEec-CChhHH-HHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCEEEeecccC-CcCcc-
Q 014642 35 YSSKHQILLVGE-GDFSFS-FALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLK-KLGASIIHGVDAT-EMKEH- 109 (421)
Q Consensus 35 Yss~~rILLVGE-GDFSFS-lSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-~~Gv~VlhgVDAT-kL~~~- 109 (421)
...+++||++|= |..-.+ ..++++.| .+|++|+.+. +.++.++ ++|+....++.-. .+.+.
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~------------~~~~~~~~~~g~~~~~d~~~~~~~~~~~ 218 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSK------------EKVDLLKTKFGFDDAFNYKEESDLTAAL 218 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTSCCSEEEETTSCSCSHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCceEEecCCHHHHHHHH
Confidence 456789999996 655433 34456655 4799887642 1245565 6788655433211 22111
Q ss_pred cccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 110 SELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 110 ~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..+....+|.||-| +|. ..+..+.++|+++|.|.+
T Consensus 219 ~~~~~~~~d~vi~~---~g~------------------~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 219 KRCFPNGIDIYFEN---VGG------------------KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HHHCTTCEEEEEES---SCH------------------HHHHHHHTTEEEEEEEEE
T ss_pred HHHhCCCCcEEEEC---CCH------------------HHHHHHHHHHhcCCEEEE
Confidence 11123569988866 331 125667788999998765
No 364
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=29.67 E-value=2.3e+02 Score=24.90 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=40.3
Q ss_pred CCeEEEEecCChhHHHHHHHhhC-CCCc-EEeccccCHHHHHHhhhhHHHHHHHHHhC--CCE-EEeecccCCc-Ccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFG-SASN-ICASSLDSYETVVKKFKEARSNLDTLKKL--GAS-IIHGVDATEM-KEHSE 111 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~g-s~~n-LvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~-VlhgVDATkL-~~~~~ 111 (421)
+++||++|=+. -.-++|++.+. .+.+ |++++.+...+ .+++|++. |.. ..+.+|.++. .....
T Consensus 5 ~k~vlVtGas~-gIG~~~a~~l~~~G~~~v~~~~r~~~~~----------~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~ 73 (254)
T 1sby_A 5 NKNVIFVAALG-GIGLDTSRELVKRNLKNFVILDRVENPT----------ALAELKAINPKVNITFHTYDVTVPVAESKK 73 (254)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTCCSEEEEEESSCCHH----------HHHHHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEECCCC-hHHHHHHHHHHHCCCcEEEEEecCchHH----------HHHHHHHhCCCceEEEEEEecCCChHHHHH
Confidence 46899998654 34455555441 2444 77777664221 12223322 333 3567888876 43211
Q ss_pred c------ccCcccEEEEcC
Q 014642 112 L------SKRKFDRIIFNF 124 (421)
Q Consensus 112 L------k~~~FDrIIFNF 124 (421)
+ .....|.||.|=
T Consensus 74 ~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 74 LLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 1 114689888774
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=29.36 E-value=88 Score=29.43 Aligned_cols=98 Identities=14% Similarity=0.262 Sum_probs=56.2
Q ss_pred ccCCCCeEEEEecC-Chh-HHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCc-c
Q 014642 34 HYSSKHQILLVGEG-DFS-FSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKE-H 109 (421)
Q Consensus 34 ~Yss~~rILLVGEG-DFS-FSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~-~ 109 (421)
...++++||++|=| ..- .+..+++.. | .+|+++..+.+ .++.++++|+.........+..+ -
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~ 232 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREE------------AVEAAKRAGADYVINASMQDPLAEI 232 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHH------------HHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHH------------HHHHHHHhCCCEEecCCCccHHHHH
Confidence 34567899999987 443 334445666 5 47888875421 13344556776554332221100 1
Q ss_pred ccccc-CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 110 SELSK-RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 110 ~~Lk~-~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..+.. ..+|.||-| +|. ..-+..+.++|+++|.|.+
T Consensus 233 ~~~~~~~~~d~vi~~---~g~-----------------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 233 RRITESKGVDAVIDL---NNS-----------------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp HHHTTTSCEEEEEES---CCC-----------------HHHHTTGGGGEEEEEEEEE
T ss_pred HHHhcCCCceEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEE
Confidence 11222 479988765 342 1246778889999998754
No 366
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=29.18 E-value=68 Score=29.31 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=45.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc----
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL---- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L---- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .++..++|++.|-...+.+|.++......+
T Consensus 29 ~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 29 GRIALVTGGSRG-IGQMIAQGLLEAGARVFICARDA-EA-------CADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCH-HH-------HHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHH
Confidence 568999986543 344444443 1256788887753 22 223455666666445567888876543222
Q ss_pred --ccCcccEEEEcC
Q 014642 113 --SKRKFDRIIFNF 124 (421)
Q Consensus 113 --k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 100 ~~~~g~iD~lvnnA 113 (276)
T 2b4q_A 100 GELSARLDILVNNA 113 (276)
T ss_dssp HHHCSCCSEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 124789998874
No 367
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=29.17 E-value=46 Score=27.99 Aligned_cols=57 Identities=19% Similarity=0.267 Sum_probs=37.5
Q ss_pred eEEEEecCChhHHHHHHHh----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHh-CCCEEEeec
Q 014642 40 QILLVGEGDFSFSFALSQK----FGSASNICASSLD---SYETVVKKFKEARSNLDTLKK-LGASIIHGV 101 (421)
Q Consensus 40 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---S~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgV 101 (421)
.|++++=|+ ||.+|+.. +|...++.|-++. +.+++.+|..+ -++++.. .|+.|+-++
T Consensus 3 ~iii~sHG~--~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~~~~~i~~---~i~~~~~~~gvliLtDl 67 (135)
T 1pdo_A 3 AIVIGTHGW--AAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNA---QLAKLDTTKGVLFLVDT 67 (135)
T ss_dssp EEEEECSBT--HHHHHHHHHHHHHCCCSSEEEECBCTTCCHHHHHHHHHH---HHTTSCCTTCEEEEESS
T ss_pred eEEEEeChH--HHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHHHHHHHHH---HHHhcCCCCCEEEEEEC
Confidence 689999997 88888754 3666788888774 56677666443 3444433 356555444
No 368
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=29.05 E-value=60 Score=30.23 Aligned_cols=93 Identities=17% Similarity=0.207 Sum_probs=56.6
Q ss_pred ccCCCCeEEEEe-cCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCC-cCccc
Q 014642 34 HYSSKHQILLVG-EGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATE-MKEHS 110 (421)
Q Consensus 34 ~Yss~~rILLVG-EGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATk-L~~~~ 110 (421)
...++++||++| -|..- ++..||+..| ..+++|+ +.+ +++.++++|+...++.+..+ +.+.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~--~~~-----------~~~~~~~lGa~~~i~~~~~~~~~~~- 212 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA--SKR-----------NHAFLKALGAEQCINYHEEDFLLAI- 212 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE--CHH-----------HHHHHHHHTCSEEEETTTSCHHHHC-
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe--ccc-----------hHHHHHHcCCCEEEeCCCcchhhhh-
Confidence 346788999997 78764 4455577775 3788886 322 14456778987554433332 2221
Q ss_pred ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 111 ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 111 ~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.+.+|.|+= .+|. .-+..+.++|+++|.|.+.
T Consensus 213 ---~~g~D~v~d---~~g~------------------~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 213 ---STPVDAVID---LVGG------------------DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp ---CSCEEEEEE---SSCH------------------HHHHHHGGGEEEEEEEEEC
T ss_pred ---ccCCCEEEE---CCCc------------------HHHHHHHHhccCCCEEEEe
Confidence 146887654 2442 1124567899999987653
No 369
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=28.82 E-value=76 Score=28.58 Aligned_cols=80 Identities=18% Similarity=0.197 Sum_probs=46.9
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS- 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk- 113 (421)
+++++|+.|=+.+ .-++|++.+ ..+.+|+.+...+.+.+. ..++.++..|.. ..+.+|.++......+-
T Consensus 24 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (269)
T 3gk3_A 24 AKRVAFVTGGMGG-LGAAISRRLHDAGMAVAVSHSERNDHVS-------TWLMHERDAGRDFKAYAVDVADFESCERCAE 95 (269)
T ss_dssp CCCEEEETTTTSH-HHHHHHHHHHTTTCEEEEEECSCHHHHH-------HHHHHHHTTTCCCEEEECCTTCHHHHHHHHH
T ss_pred cCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCchHHHH-------HHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3567888886542 344444443 235678888766554332 234555665543 45678988876533221
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
..+.|.||.|=
T Consensus 96 ~~~~~~g~id~li~nA 111 (269)
T 3gk3_A 96 KVLADFGKVDVLINNA 111 (269)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 24789988873
No 370
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.69 E-value=3.1e+02 Score=24.36 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=61.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEecccc-----------CHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLD-----------SYETVVKKFKEARSNLDTLKKLGAS-IIHGVDAT 104 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlD-----------S~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDAT 104 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+..+ +.+.+ +....+++..|.. ..+.+|.+
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDL-------EEAGLEVEKTGRKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHH-------HHHHHHHHHTTSCEEEEECCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHH-------HHHHHHHHhcCCceEEEEccCC
Confidence 568899997652 334444433 125678877654 12222 2234455666654 45678988
Q ss_pred CcCccccc------ccCcccEEEEcCCCCCCC---CCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 105 EMKEHSEL------SKRKFDRIIFNFPHAGFH---GKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 105 kL~~~~~L------k~~~FDrIIFNFPH~G~~---GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
+......+ ...+.|.+|.|==..... ..++-.+.+..|-.=.....+.+...|..+|.|...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 87653222 124789988873222211 112222333333222233344455566677776544
No 371
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.68 E-value=91 Score=28.90 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=42.1
Q ss_pred CeEEEEecCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEee
Q 014642 39 HQILLVGEGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHG 100 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vlhg 100 (421)
.+|-+||=+|....+.. ...++ .+|.--++++++++. .-|++|++.|+.|+-|
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~--~~i~~~~~~~~ee~~-------~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFN--LRLDQRSYITEEDAR-------GQINELKANGTEAVVG 160 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHT--CCEEEEEESSHHHHH-------HHHHHHHHTTCCEEEE
T ss_pred CcEEEEeCchhhhHHHHHHHHhC--CceEEEEeCCHHHHH-------HHHHHHHHCCCCEEEC
Confidence 48999999999888664 45554 567777889887764 4589999999998887
No 372
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=28.31 E-value=59 Score=30.95 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=44.2
Q ss_pred ccCCCCeEEEEecCChh-HHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-c
Q 014642 34 HYSSKHQILLVGEGDFS-FSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-S 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFS-FSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~ 110 (421)
....+++||++|-|..- ++..||++. | .+|+||+... ++++.++++|+...++.+.. +.+. .
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~-~~~~v~ 247 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVKE------------EKLKLAERLGADHVVDARRD-PVKQVM 247 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESSH------------HHHHHHHHTTCSEEEETTSC-HHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCCH------------HHHHHHHHhCCCEEEeccch-HHHHHH
Confidence 34568899999987543 445567777 5 3799987542 23566778898655443322 1111 1
Q ss_pred ccc-cCcccEEEE
Q 014642 111 ELS-KRKFDRIIF 122 (421)
Q Consensus 111 ~Lk-~~~FDrIIF 122 (421)
.+. +..+|.||=
T Consensus 248 ~~~~g~g~Dvvid 260 (359)
T 1h2b_A 248 ELTRGRGVNVAMD 260 (359)
T ss_dssp HHTTTCCEEEEEE
T ss_pred HHhCCCCCcEEEE
Confidence 122 346888764
No 373
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=28.19 E-value=1.4e+02 Score=25.69 Aligned_cols=55 Identities=24% Similarity=0.381 Sum_probs=37.8
Q ss_pred eEEEEecCChhHHHHHHHh----hCCCCcEEeccc---cCHHHHHHhhhhHHHHHHHH-H-hCCCEEEe
Q 014642 40 QILLVGEGDFSFSFALSQK----FGSASNICASSL---DSYETVVKKFKEARSNLDTL-K-KLGASIIH 99 (421)
Q Consensus 40 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSl---DS~eeL~~KY~~a~~Nl~~L-r-~~Gv~Vlh 99 (421)
.|++++=|+ ||.+|+.. +|...++.|-++ ++.+++.+++.++ ++.+ . ..|+.|+-
T Consensus 5 giii~sHG~--~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~---i~~~~~~~~gvliLt 68 (144)
T 3lfh_A 5 FVLIITHGD--FGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKI---IKEKLQEDKEIIIVV 68 (144)
T ss_dssp EEEEEEETT--HHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHH---HHHHHTTTCEEEEEE
T ss_pred eEEEEeCcH--HHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHH---HHHhhCCCCcEEEEE
Confidence 699999997 78888764 366668888877 4667787765544 6666 3 23454543
No 374
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=28.15 E-value=1.1e+02 Score=28.70 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=54.4
Q ss_pred cCCCCeEEEEec-CChhH-HHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccC---CcCcc
Q 014642 35 YSSKHQILLVGE-GDFSF-SFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDAT---EMKEH 109 (421)
Q Consensus 35 Yss~~rILLVGE-GDFSF-SlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDAT---kL~~~ 109 (421)
..++++||++|= |..-. +..+++..| .+|+++..+... ++.++++|+.... |.+ .+.+.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~------------~~~~~~~g~~~~~--d~~~~~~~~~~ 230 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGK------------EELFRSIGGEVFI--DFTKEKDIVGA 230 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTH------------HHHHHHTTCCEEE--ETTTCSCHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHH------------HHHHHHcCCceEE--ecCccHhHHHH
Confidence 456789999998 54433 333455554 489998765321 2345567876444 443 22111
Q ss_pred c-ccccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 110 S-ELSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 110 ~-~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. .+....+|.||-|- |. ...+..+.++|+++|.|.+
T Consensus 231 ~~~~~~~~~D~vi~~~---g~-----------------~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 231 VLKATDGGAHGVINVS---VS-----------------EAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp HHHHHTSCEEEEEECS---SC-----------------HHHHHHHTTSEEEEEEEEE
T ss_pred HHHHhCCCCCEEEECC---Cc-----------------HHHHHHHHHHHhcCCEEEE
Confidence 0 11112799988763 32 0245667788999998654
No 375
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.11 E-value=3e+02 Score=24.87 Aligned_cols=80 Identities=9% Similarity=0.124 Sum_probs=44.6
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS- 113 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk- 113 (421)
+++++|+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+ +...++++..|.. ..+.+|.++......+-
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 26 TNKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAA-------EEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp -CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 3568999986653 334444333 12457777644333322 2234456666654 45678988876543221
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 98 ~~~~~~g~iD~lvnnA 113 (267)
T 3u5t_A 98 TAEEAFGGVDVLVNNA 113 (267)
T ss_dssp HHHHHHSCEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 25789888873
No 376
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=28.11 E-value=38 Score=31.57 Aligned_cols=97 Identities=14% Similarity=0.208 Sum_probs=55.1
Q ss_pred ccCCCCeEEEEe-cCChhHHHH-HHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-c
Q 014642 34 HYSSKHQILLVG-EGDFSFSFA-LSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-S 110 (421)
Q Consensus 34 ~Yss~~rILLVG-EGDFSFSlS-La~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~ 110 (421)
....+++||++| -|..-.+.+ +++..| .+|++|+.+. + .++.++++|+......+..++.+. .
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~-~-----------~~~~~~~~g~~~~~~~~~~~~~~~~~ 202 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTA-Q-----------KAQSALKAGAWQVINYREEDLVERLK 202 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSH-H-----------HHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCH-H-----------HHHHHHHcCCCEEEECCCccHHHHHH
Confidence 345678999999 576544333 356665 4799987652 1 133445567765543332222111 0
Q ss_pred c-cccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 111 E-LSKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 111 ~-Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. .....+|.||-|- |. ..+..+.++|+++|.|.+
T Consensus 203 ~~~~~~~~D~vi~~~---g~------------------~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 203 EITGGKKVRVVYDSV---GR------------------DTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp HHTTTCCEEEEEECS---CG------------------GGHHHHHHTEEEEEEEEE
T ss_pred HHhCCCCceEEEECC---ch------------------HHHHHHHHHhcCCCEEEE
Confidence 1 1234699988763 31 124667778999998654
No 377
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=28.05 E-value=31 Score=34.61 Aligned_cols=38 Identities=11% Similarity=0.242 Sum_probs=24.2
Q ss_pred cCCCCeEEEEecCChhHHHH--HHHhhCCCCcEEeccccC
Q 014642 35 YSSKHQILLVGEGDFSFSFA--LSQKFGSASNICASSLDS 72 (421)
Q Consensus 35 Yss~~rILLVGEGDFSFSlS--La~~~gs~~nLvATSlDS 72 (421)
+-.++++.+.||+++.++++ |.+.+|-..-.++|.+-+
T Consensus 304 ~l~Gkrv~i~g~~~~~~~l~~~L~~elG~~vv~~~~~~~~ 343 (437)
T 3aek_A 304 TLTGKSLFMFPDSQLEIPLARFLARECGMKTTEIATPFLH 343 (437)
T ss_dssp HHTTCEEEECSSSSCHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred HhCCCEEEEEcCchHHHHHHHHHHHHcCCEEEEEEecCCC
Confidence 33478999999999877766 335565433444454444
No 378
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=28.02 E-value=58 Score=29.55 Aligned_cols=78 Identities=13% Similarity=0.213 Sum_probs=44.5
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC--EEEeecccCCcCccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA--SIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv--~VlhgVDATkL~~~~~L- 112 (421)
++++||+.|=+.+ .-++|++.+ ..+.+|++++.+. +.+ +...++|++.|. ...+.+|.++......+
T Consensus 27 ~~k~vlITGasgg-IG~~la~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~ 97 (286)
T 1xu9_A 27 QGKKVIVTGASKG-IGREMAYHLAKMGAHVVVTARSK-ETL-------QKVVSHCLELGAASAHYIAGTMEDMTFAEQFV 97 (286)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCH-HHH-------HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 3578999996543 344444433 1256899988753 222 122344555453 34567888876543221
Q ss_pred -----ccCcccEEEEc
Q 014642 113 -----SKRKFDRIIFN 123 (421)
Q Consensus 113 -----k~~~FDrIIFN 123 (421)
.....|.||.|
T Consensus 98 ~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 98 AQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHTSCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 12479999988
No 379
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=27.77 E-value=31 Score=35.24 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=56.1
Q ss_pred CCCeEEEEec-CChhHHHHHHHhhCCCCcEEeccccCHHHHH----HhhhhHHHHHHHHHhCCC-EEEeecccCCcCccc
Q 014642 37 SKHQILLVGE-GDFSFSFALSQKFGSASNICASSLDSYETVV----KKFKEARSNLDTLKKLGA-SIIHGVDATEMKEHS 110 (421)
Q Consensus 37 s~~rILLVGE-GDFSFSlSLa~~~gs~~nLvATSlDS~eeL~----~KY~~a~~Nl~~Lr~~Gv-~VlhgVDATkL~~~~ 110 (421)
..+++|++|= ..+.-|.+++-+++.+.++++.+++.+..-. ..+.+.....+++++.|. .+.+..|+++-....
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 4578899984 4677666666665456789999997543211 112234455567777765 467899998854432
Q ss_pred cc------ccCcccEEEEc
Q 014642 111 EL------SKRKFDRIIFN 123 (421)
Q Consensus 111 ~L------k~~~FDrIIFN 123 (421)
.+ ..++.|.+|.|
T Consensus 129 ~vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEe
Confidence 21 24789999998
No 380
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=27.66 E-value=59 Score=32.17 Aligned_cols=98 Identities=18% Similarity=0.270 Sum_probs=58.2
Q ss_pred ccCCCCeEEEEec-CChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcC----
Q 014642 34 HYSSKHQILLVGE-GDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMK---- 107 (421)
Q Consensus 34 ~Yss~~rILLVGE-GDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~---- 107 (421)
....+++||++|- |..- ++..||++.| .++|+++- +. ++++.++++|+.........++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~-~~-----------~~~~~~~~lGa~~vi~~~~~d~~~~~~ 290 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVS-SP-----------QKAEICRAMGAEAIIDRNAEGYRFWKD 290 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SH-----------HHHHHHHHHTCCEEEETTTTTCCSEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEEC-CH-----------HHHHHHHhhCCcEEEecCcCccccccc
Confidence 3456889999998 7654 4455567765 47777763 32 24667788898765443332221
Q ss_pred --------------ccccc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 108 --------------EHSEL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 108 --------------~~~~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
.-..+ .+..+|.|| + .+|. ..+..+..+|+++|.|.+.
T Consensus 291 ~~~~~~~~~~~~~~~i~~~t~g~g~Dvvi-d--~~G~------------------~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 291 ENTQDPKEWKRFGKRIRELTGGEDIDIVF-E--HPGR------------------ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp TTEECHHHHHHHHHHHHHHHTSCCEEEEE-E--CSCH------------------HHHHHHHHHEEEEEEEEES
T ss_pred ccccchHHHHHHHHHHHHHhCCCCCcEEE-E--cCCc------------------hhHHHHHHHhhCCcEEEEE
Confidence 00011 235788665 4 2441 1356677789999987653
No 381
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=27.49 E-value=78 Score=29.56 Aligned_cols=77 Identities=19% Similarity=0.342 Sum_probs=48.9
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEE-eecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASII-HGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vl-hgVDATkL~~~~~L--- 112 (421)
++.+|+.|=+. =--+++|+.| ..+.+|+.+..+ ++. .++..++|++.|.+++ +.+|.++-.....+
T Consensus 7 gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~-~~~-------~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 7 NKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELL-EDR-------LNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESC-HHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECC-HHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 56778877443 3344444443 135688887765 332 3445778888887654 78899987765433
Q ss_pred ---ccCcccEEEEc
Q 014642 113 ---SKRKFDRIIFN 123 (421)
Q Consensus 113 ---k~~~FDrIIFN 123 (421)
+-.+.|.+|-|
T Consensus 78 ~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 78 TFETYSRIDVLCNN 91 (254)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 23689999988
No 382
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=27.31 E-value=1.9e+02 Score=28.23 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=56.9
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH--HhCCCEEEeecccCCcCcccccccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL--KKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L--r~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+||+|||+-==.+++|+.. ....+..|+-++.. .+.|++.- ...+++.+-. +.. -..
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~-------~~~n~~~~~~~~~~~~~~~~-----~~~----~~~ 99 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH---KPYSIGDSYISELA-------TRENLRLNGIDESSVKFLDS-----TAD----YPQ 99 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHH-------HHHHHHHTTCCGGGSEEEET-----TSC----CCS
T ss_pred CCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHH-------HHHHHHHcCCCccceEeccc-----ccc----ccc
Confidence 358999999876677777643 22333334433322 23454331 1111232211 111 136
Q ss_pred cccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCC
Q 014642 116 KFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTT 170 (421)
Q Consensus 116 ~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g 170 (421)
.+|.|+.-.|- +..++..-+..+...|+++++|.+.-.++
T Consensus 100 ~~~~v~~~lpk---------------~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 100 QPGVVLIKVPK---------------TLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp SCSEEEEECCS---------------CHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred CCCEEEEEcCC---------------CHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 79999998772 34456666777888899999996665544
No 383
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=27.25 E-value=97 Score=27.61 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=45.4
Q ss_pred CCeEEEEecCCh---hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDF---SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDF---SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L- 112 (421)
+++||+.|=+.+ ..+..|++. +.+|++++.+.... ...+..++|++.|.. ..+.+|.++......+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 72 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD---GFDIAVADLPQQEE------QAAETIKLIEAADQKAVFVGLDVTDKANFDSAI 72 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECGGGHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcchH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 357899986643 344444443 45788887764321 122345566665543 4567898886543222
Q ss_pred -----ccCcccEEEEcC
Q 014642 113 -----SKRKFDRIIFNF 124 (421)
Q Consensus 113 -----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 73 ~~~~~~~g~iD~lv~nA 89 (258)
T 3a28_C 73 DEAAEKLGGFDVLVNNA 89 (258)
T ss_dssp HHHHHHHTCCCEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 124789888874
No 384
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=27.11 E-value=3.6e+02 Score=24.49 Aligned_cols=96 Identities=14% Similarity=0.054 Sum_probs=55.0
Q ss_pred CCCCeEEEEecCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC----E-EEeecccCCc---
Q 014642 36 SSKHQILLVGEGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA----S-IIHGVDATEM--- 106 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv----~-VlhgVDATkL--- 106 (421)
.+.++||=+|=| +|..+ |+.. +..||+.-.| ++..+ .+.+|++ +.|. + .++-.||...
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~~~--~g~VvtvE~d--~~~~~---~ar~~l~---~~g~~~~~~I~~~~gda~~~~~w 95 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAELP--GKHVTSVESD--RAWAR---MMKAWLA---ANPPAEGTEVNIVWTDIGPTGDW 95 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHTST--TCEEEEEESC--HHHHH---HHHHHHH---HSCCCTTCEEEEEECCCSSBCGG
T ss_pred hCCCEEEEECch---HHHHHHHHcC--CCEEEEEeCC--HHHHH---HHHHHHH---HcCCCCCCceEEEEeCchhhhcc
Confidence 356799999998 45444 5532 3466665554 33332 3555654 4453 2 2455677543
Q ss_pred ------------Cccc----cc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeE
Q 014642 107 ------------KEHS----EL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEV 163 (421)
Q Consensus 107 ------------~~~~----~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeI 163 (421)
.... .+ ....||.|+-+ |. + + ..++..+..+|++||.|
T Consensus 96 g~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfID----g~--k----~---------~~~~~~~l~~l~~GG~I 150 (202)
T 3cvo_A 96 GHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVD----GR--F----R---------VGCALATAFSITRPVTL 150 (202)
T ss_dssp GCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEEC----SS--S----H---------HHHHHHHHHHCSSCEEE
T ss_pred cccccchhhhhHHHHhhhhhccccCCCCCEEEEe----CC--C----c---------hhHHHHHHHhcCCCeEE
Confidence 1110 11 13679999987 32 1 1 15555677899999988
No 385
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=27.02 E-value=1.4e+02 Score=28.00 Aligned_cols=77 Identities=17% Similarity=0.090 Sum_probs=51.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++ +||=||=|.=.++..|++.. ..|+|.-.|.. +.+ .+++++. ...++|+++ |+.++.... ..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~--~~~---~l~~~~~---~~~v~vi~~-D~l~~~~~~---~~ 109 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLR--LRP---VLEETLS---GLPVRLVFQ-DALLYPWEE---VP 109 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGG--GHH---HHHHHTT---TSSEEEEES-CGGGSCGGG---SC
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHH--HHH---HHHHhcC---CCCEEEEEC-ChhhCChhh---cc
Confidence 346 99999999999999999863 47999888742 111 1222332 234666554 887775321 13
Q ss_pred cccEEEEcCCCCC
Q 014642 116 KFDRIIFNFPHAG 128 (421)
Q Consensus 116 ~FDrIIFNFPH~G 128 (421)
.||.||-|.|.--
T Consensus 110 ~~~~iv~NlPy~i 122 (271)
T 3fut_A 110 QGSLLVANLPYHI 122 (271)
T ss_dssp TTEEEEEEECSSC
T ss_pred CccEEEecCcccc
Confidence 6899999999764
No 386
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=26.96 E-value=88 Score=26.96 Aligned_cols=57 Identities=16% Similarity=0.336 Sum_probs=38.4
Q ss_pred eEEEEecCChhHHHHHHHh----hCCCCcEEecccc---CHHHHHHhhhhHHHHHHHHHh-CCCEEEeec
Q 014642 40 QILLVGEGDFSFSFALSQK----FGSASNICASSLD---SYETVVKKFKEARSNLDTLKK-LGASIIHGV 101 (421)
Q Consensus 40 rILLVGEGDFSFSlSLa~~----~gs~~nLvATSlD---S~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgV 101 (421)
.|++|+=| +||.+|+.. +|...++.|-++. +.+++.++..+ -++.+.. .|+.|+-++
T Consensus 3 giii~sHg--~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i~~---~i~~~~~~~gvlvLtDl 67 (150)
T 3ipr_A 3 GIVIATHG--ALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQIKT---AIENVQQGDGVLVMVDL 67 (150)
T ss_dssp EEEEEEET--THHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHHHH---HHHHHCSSSCEEEEESS
T ss_pred EEEEEECc--HHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHHH---HHHhcCCCCCEEEEEeC
Confidence 68999999 788888754 3665678777763 56777776544 3666644 466665444
No 387
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.86 E-value=1.3e+02 Score=27.36 Aligned_cols=76 Identities=14% Similarity=0.257 Sum_probs=46.1
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+++..+. ...+..++|++.|..+ .+.+|.++......+.
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (273)
T 3uf0_A 31 GRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTD---------GVKEVADEIADGGGSAEAVVADLADLEGAANVAEE 100 (273)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESST---------HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHH---------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 568999997653 334444433 1256788887332 1234566777777654 4568888876543331
Q ss_pred ---cCcccEEEEc
Q 014642 114 ---KRKFDRIIFN 123 (421)
Q Consensus 114 ---~~~FDrIIFN 123 (421)
..+.|.+|.|
T Consensus 101 ~~~~g~iD~lv~n 113 (273)
T 3uf0_A 101 LAATRRVDVLVNN 113 (273)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHhcCCCcEEEEC
Confidence 2578988887
No 388
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=26.74 E-value=1.2e+02 Score=27.51 Aligned_cols=78 Identities=13% Similarity=0.222 Sum_probs=46.2
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---E-EEeecccCCcCccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---S-IIHGVDATEMKEHSEL 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~-VlhgVDATkL~~~~~L 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|+.+..+. +. ..+..++|++.|. . ..+.+|.++......+
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (281)
T 3svt_A 11 DRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNP-DK-------LAGAVQELEALGANGGAIRYEPTDITNEDETARA 81 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence 568999996653 233444333 1256788887653 22 2334667777664 4 4567898887643222
Q ss_pred ------ccCcccEEEEcC
Q 014642 113 ------SKRKFDRIIFNF 124 (421)
Q Consensus 113 ------k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 82 ~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 82 VDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 125789888873
No 389
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=26.18 E-value=1.4e+02 Score=25.85 Aligned_cols=78 Identities=13% Similarity=0.214 Sum_probs=44.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHH-hCCCE-EEeecccCCcCcccccc-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLK-KLGAS-IIHGVDATEMKEHSELS- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr-~~Gv~-VlhgVDATkL~~~~~Lk- 113 (421)
+++||+.|=+. -.-+++++.+ ..+.+|+.++.+. +.+ +...++|. ..|.. ..+.+|.++......+-
T Consensus 2 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (235)
T 3l77_A 2 MKVAVITGASR-GIGEAIARALARDGYALALGARSV-DRL-------EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72 (235)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence 46789998654 3455555554 1356788887763 222 22233443 33444 45678998876533221
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 73 ~~~~~~g~id~li~~A 88 (235)
T 3l77_A 73 KVLERFGDVDVVVANA 88 (235)
T ss_dssp -HHHHHSSCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 14789888774
No 390
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=26.13 E-value=90 Score=28.22 Aligned_cols=78 Identities=15% Similarity=0.219 Sum_probs=45.4
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ ++..++|++.|.. ..+.+|.++......+-
T Consensus 21 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 21 GTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNE-KEL-------DECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 568999996543 234444433 1256788887763 222 2335566666654 34667888765432221
Q ss_pred ----c-CcccEEEEcC
Q 014642 114 ----K-RKFDRIIFNF 124 (421)
Q Consensus 114 ----~-~~FDrIIFNF 124 (421)
. .+.|.+|.|=
T Consensus 92 ~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHTTSCCCEEEECC
T ss_pred HHHHcCCCCcEEEECC
Confidence 1 5789998884
No 391
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.12 E-value=1.2e+02 Score=27.18 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=42.4
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccc----
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSEL---- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~L---- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+..+. +.+ ++..+++. +-...+.+|.++......+
T Consensus 8 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 8 GKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNE-SNI-------ARIREEFG--PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHG--GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHhC--CcceEEEccCCCHHHHHHHHHHH
Confidence 568899986543 444555444 1356888887752 222 11222231 2235567898887654322
Q ss_pred --ccCcccEEEEcC
Q 014642 113 --SKRKFDRIIFNF 124 (421)
Q Consensus 113 --k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 77 ~~~~g~id~lv~nA 90 (255)
T 4eso_A 77 GQTLGAIDLLHINA 90 (255)
T ss_dssp HHHHSSEEEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 125789888773
No 392
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=25.66 E-value=88 Score=27.68 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=44.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|+++...+.+.+ ++..++|++.|.. ..+.+|.++......+-
T Consensus 4 ~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 4 GKVALVTGASRG-IGRAIAIDLAKQGANVVVNYAGNEQKA-------NEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 467888885543 334444433 13568888877444333 2234566666654 34677888765432221
Q ss_pred ----cCcccEEEEc
Q 014642 114 ----KRKFDRIIFN 123 (421)
Q Consensus 114 ----~~~FDrIIFN 123 (421)
....|.+|.|
T Consensus 76 ~~~~~g~id~lv~n 89 (246)
T 2uvd_A 76 TVDVFGQVDILVNN 89 (246)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 1478999877
No 393
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.61 E-value=93 Score=27.82 Aligned_cols=68 Identities=10% Similarity=0.224 Sum_probs=40.2
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCc
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRK 116 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~ 116 (421)
..+||++| ..| -..+|++.+ ..+..|++++..... + ..++.++ ..|.++......+-...
T Consensus 3 ~~~ilVtG-aG~-iG~~l~~~L~~~g~~V~~~~r~~~~---------------~-~~~~~~~-~~Dl~d~~~~~~~~~~~ 63 (286)
T 3gpi_A 3 LSKILIAG-CGD-LGLELARRLTAQGHEVTGLRRSAQP---------------M-PAGVQTL-IADVTRPDTLASIVHLR 63 (286)
T ss_dssp CCCEEEEC-CSH-HHHHHHHHHHHTTCCEEEEECTTSC---------------C-CTTCCEE-ECCTTCGGGCTTGGGGC
T ss_pred CCcEEEEC-CCH-HHHHHHHHHHHCCCEEEEEeCCccc---------------c-ccCCceE-EccCCChHHHHHhhcCC
Confidence 46899999 655 344555444 235689988876421 1 2455544 55777655433222346
Q ss_pred ccEEEEcC
Q 014642 117 FDRIIFNF 124 (421)
Q Consensus 117 FDrIIFNF 124 (421)
+|.||.+-
T Consensus 64 ~d~vih~a 71 (286)
T 3gpi_A 64 PEILVYCV 71 (286)
T ss_dssp CSEEEECH
T ss_pred CCEEEEeC
Confidence 99999764
No 394
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=25.39 E-value=83 Score=29.55 Aligned_cols=95 Identities=19% Similarity=0.258 Sum_probs=53.3
Q ss_pred CCCeEEEEecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccccc
Q 014642 37 SKHQILLVGEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SELSK 114 (421)
Q Consensus 37 s~~rILLVGEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~Lk~ 114 (421)
++++||++|=|.. .++..||++.| ..+|+||+...+ .++.++++ +...++.+..++.+. ..+.+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~~------------~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~ 229 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASG-AGPILVSDPNPY------------RLAFARPY-ADRLVNPLEEDLLEVVRRVTG 229 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCHH------------HHGGGTTT-CSEEECTTTSCHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHH------------HHHHHHHh-HHhccCcCccCHHHHHHHhcC
Confidence 6789999998764 34555667765 337999876421 23344555 543333322222111 11114
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
..+|.||-. +|. ...+..+.++|+++|.|.+
T Consensus 230 ~g~D~vid~---~g~-----------------~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 230 SGVEVLLEF---SGN-----------------EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp SCEEEEEEC---SCC-----------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEEC---CCC-----------------HHHHHHHHHHHhcCCEEEE
Confidence 568988754 332 1235667778899997654
No 395
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=25.19 E-value=87 Score=28.73 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=47.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+++..+. +. .++..++|++.|.. +.+.+|.++......+
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 28 SPVALITGAGSG-IGRATALALAADGVTVGALGRTR-TE-------VEEVADEIVGAGGQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSH-HH-------HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 457899986542 344454443 1356888887653 22 23445667766654 4577898886543222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 99 ~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 99 LVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 125799998884
No 396
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=25.06 E-value=1.2e+02 Score=27.04 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=45.2
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ --+++++.+ ..+.+|++++.+. +.+ +...++|++.|.. ..+.+|.++......+
T Consensus 7 ~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 7 GKVALITGASSG-IGEATARALAAEGAAVAIAARRV-EKL-------RALGDELTAAGAKVHVLELDVADRQGVDAAVAS 77 (247)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCH-HHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 467999986643 334444433 1256788887763 222 2234566666654 4567898886543222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
.....|.+|.|=
T Consensus 78 ~~~~~g~id~lv~nA 92 (247)
T 2jah_A 78 TVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124789998873
No 397
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.90 E-value=1.7e+02 Score=26.67 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=46.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC-C-CEEEeecccCCcCccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKL-G-ASIIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~-G-v~VlhgVDATkL~~~~~L-- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+. ...++|++. + -...+.+|.++......+
T Consensus 25 ~k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 96 (281)
T 3v2h_A 25 TKTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIR-------TVTDEVAGLSSGTVLHHPADMTKPSEIADMMA 96 (281)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHH-------HHHHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHH-------HHHHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence 468899996543 344444443 135689988886654432 234456654 3 345567888886543222
Q ss_pred ----ccCcccEEEEcC
Q 014642 113 ----SKRKFDRIIFNF 124 (421)
Q Consensus 113 ----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 97 ~~~~~~g~iD~lv~nA 112 (281)
T 3v2h_A 97 MVADRFGGADILVNNA 112 (281)
T ss_dssp HHHHHTSSCSEEEECC
T ss_pred HHHHHCCCCCEEEECC
Confidence 125789988873
No 398
>3if4_A Integron cassette protein HFX_CASS5; integron cassette protein mobIle metagenome structural genomics PSI-2 protein structure initiative midwest center for structural genomics; HET: MSE; 2.18A {Unidentified}
Probab=24.78 E-value=48 Score=28.44 Aligned_cols=43 Identities=19% Similarity=0.466 Sum_probs=27.8
Q ss_pred HHHHhhHhc------cCCCCeEEEEecCCC-C---------------------------cCcc--cHHHHHHhCCcEEE
Q 014642 148 GFFRNASGM------LRPRGEVHVSHKTTA-P---------------------------FCKW--HIEELARKHSLLRL 190 (421)
Q Consensus 148 ~FF~SA~~l------L~~~GeIHVTLk~g~-P---------------------------Y~sW--nI~~LAa~aGL~L~ 190 (421)
-+|+|-.+= +...|+||||+.... | |..| +|-+.|++.|..|+
T Consensus 17 ~~~~~mk~e~ia~IEvd~~Grihv~p~~s~FpYIYREAmEV~Wd~~~k~lhSP~PREWsy~~W~~qI~~aA~~qg~~Lv 95 (119)
T 3if4_A 17 LYFQGMKQEFVAAIEIDGTGRIHVTPGESQFPYIYREAMEVSWNESTRSLHSPVPREWSYAQWLQQIFAAASEQGVKLV 95 (119)
T ss_dssp ---CCCEEEEEEEEEECTTSCEEEEESSCCCTTGGGGCSSCEEETTTTEEECCCCCCCCHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhHHhHHHHHHHeeeccCCcEEEeeCCCcCceeeeeheeeeeccCcccccCCCCccccHHHHHHHHHHHHHhcCceEE
Confidence 367664431 245799999996642 2 3345 78889999998876
No 399
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=24.68 E-value=1e+02 Score=27.61 Aligned_cols=76 Identities=12% Similarity=0.177 Sum_probs=46.1
Q ss_pred CCeEEEEecCCh---hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDF---SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDF---SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L- 112 (421)
++++|+.|=+.+ ..++.|+++ +.+|+.+..+.. . .+...++|++.|.. ..+.+|.++......+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 80 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKA---GASVVVTDLKSE-G-------AEAVAAAIRQAGGKAIGLECNVTDEQHREAVI 80 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHH---TCEEEEEESSHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHH-H-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 467888886653 334444443 467888877532 1 23455667777654 4467898887653222
Q ss_pred -----ccCcccEEEEcC
Q 014642 113 -----SKRKFDRIIFNF 124 (421)
Q Consensus 113 -----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 81 ~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 81 KAALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 124789988873
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=24.49 E-value=85 Score=29.41 Aligned_cols=78 Identities=10% Similarity=0.123 Sum_probs=46.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~L- 112 (421)
+++||+.|=+.+ ..++|++.+ ..+.+|++++.+.. . .+..+++|+..|. ...+.+|.++......+
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~ 78 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQD-S-------IDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence 468999996643 345555544 23568999887632 1 2233455655553 45677899887643222
Q ss_pred -----ccCcccEEEEcC
Q 014642 113 -----SKRKFDRIIFNF 124 (421)
Q Consensus 113 -----k~~~FDrIIFNF 124 (421)
.....|.||.|=
T Consensus 79 ~~~~~~~g~id~lv~nA 95 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNA 95 (319)
T ss_dssp HHHHHHTCCEEEEEECC
T ss_pred HHHHHhCCCCCEEEECC
Confidence 125689888773
No 401
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=24.48 E-value=1e+02 Score=27.36 Aligned_cols=76 Identities=13% Similarity=0.238 Sum_probs=44.4
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ --+++++.+ ..+.+|++++.+..+.+.+ .|++.|.. ..+.+|.++......+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~----------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (249)
T 2ew8_A 7 DKLAVITGGANG-IGRAIAERFAVEGADIAIADLVPAPEAEA----------AIRNLGRRVLTVKCDVSQPGDVEAFGKQ 75 (249)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCHHHHH----------HHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCCchhHHHH----------HHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 467999996654 344454443 1356898888775232221 34455543 4467888876543222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 76 ~~~~~g~id~lv~nA 90 (249)
T 2ew8_A 76 VISTFGRCDILVNNA 90 (249)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 125789988874
No 402
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=24.45 E-value=1.6e+02 Score=26.62 Aligned_cols=77 Identities=19% Similarity=0.336 Sum_probs=49.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
.++.+||=||=|.=.++..|++.. ..++|.-.|. ++.+ .+++|+.. ..+++++. -|+.++... ...
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~--~~~~---~a~~~~~~--~~~v~~~~-~D~~~~~~~---~~~ 94 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDH--KLCK---TTENKLVD--HDNFQVLN-KDILQFKFP---KNQ 94 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCH--HHHH---HHHHHTTT--CCSEEEEC-CCGGGCCCC---SSC
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCH--HHHH---HHHHhhcc--CCCeEEEE-ChHHhCCcc---cCC
Confidence 457799999999999999999873 4687776663 2222 23344332 12455544 488776421 123
Q ss_pred cccEEEEcCCCC
Q 014642 116 KFDRIIFNFPHA 127 (421)
Q Consensus 116 ~FDrIIFNFPH~ 127 (421)
.| .||-|.|.-
T Consensus 95 ~~-~vv~nlPy~ 105 (244)
T 1qam_A 95 SY-KIFGNIPYN 105 (244)
T ss_dssp CC-EEEEECCGG
T ss_pred Ce-EEEEeCCcc
Confidence 45 799999985
No 403
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.40 E-value=2.8e+02 Score=24.62 Aligned_cols=77 Identities=9% Similarity=0.108 Sum_probs=42.2
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--C-CEEEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKL--G-ASIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--G-v~VlhgVDATkL~~~~~L- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+.. .+ ....++|++. + -...+.+|.++......+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~-~~-------~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (267)
T 2gdz_A 7 GKVALVTGAAQG-IGRAFAEALLLKGAKVALVDWNLE-AG-------VQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 77 (267)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-HH-------HHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCCc-HHHHHHHHHHHCCCEEEEEECCHH-HH-------HHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence 468999996653 233444333 12568888877632 11 1223445442 2 234567888876543221
Q ss_pred c-----cCcccEEEEc
Q 014642 113 S-----KRKFDRIIFN 123 (421)
Q Consensus 113 k-----~~~FDrIIFN 123 (421)
. ..+.|.||.|
T Consensus 78 ~~~~~~~g~id~lv~~ 93 (267)
T 2gdz_A 78 RKVVDHFGRLDILVNN 93 (267)
T ss_dssp HHHHHHHSCCCEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 1 1468988877
No 404
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=24.33 E-value=95 Score=28.20 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=45.1
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ +...++|++.|.. ..+.+|.++......+
T Consensus 22 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 22 SEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGE-EGL-------RTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp SCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 468999986653 234444333 1256788887763 222 2334566666644 4467888876543221
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
.....|.||.|=
T Consensus 93 ~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 93 VVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHTCSCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 124789988874
No 405
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=23.90 E-value=1.3e+02 Score=26.87 Aligned_cols=75 Identities=17% Similarity=0.308 Sum_probs=42.4
Q ss_pred CCeEEEEecC---Ch--hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccc
Q 014642 38 KHQILLVGEG---DF--SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSE 111 (421)
Q Consensus 38 ~~rILLVGEG---DF--SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~ 111 (421)
+++||+.|=+ .. ..+..|++. +.+|++++.+.. + .+.+++|.+ .|....+.+|.++......
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 75 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEA---GAEVALSYQAER--L-------RPEAEKLAEALGGALLFRADVTQDEELDA 75 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHH---TCEEEEEESCGG--G-------HHHHHHHHHHTTCCEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCCHH--H-------HHHHHHHHHhcCCcEEEECCCCCHHHHHH
Confidence 4689999964 32 333334443 457888876542 1 123444443 2434567789888654322
Q ss_pred cc------cCcccEEEEcC
Q 014642 112 LS------KRKFDRIIFNF 124 (421)
Q Consensus 112 Lk------~~~FDrIIFNF 124 (421)
+- ..+.|.||.|=
T Consensus 76 ~~~~~~~~~g~iD~lv~~A 94 (261)
T 2wyu_A 76 LFAGVKEAFGGLDYLVHAI 94 (261)
T ss_dssp HHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 21 14789888774
No 406
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=23.85 E-value=1.9e+02 Score=25.30 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=45.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++++.+ ..+.+++.+.-.+.+.+ +..+++|++.|..+ .+.+|.++......+-
T Consensus 7 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (255)
T 3icc_A 7 GKVALVTGASRG-IGRAIAKRLANDGALVAIHYGNRKEEA-------EETVYEIQSNGGSAFSIGANLESLHGVEALYSS 78 (255)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCSHHH-------HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEeCCchHHH-------HHHHHHHHhcCCceEEEecCcCCHHHHHHHHHH
Confidence 567888886542 344555443 12457777644443332 33466777777654 5678888876432221
Q ss_pred ----------cCcccEEEEcC
Q 014642 114 ----------KRKFDRIIFNF 124 (421)
Q Consensus 114 ----------~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 79 ~~~~~~~~~~~~~id~lv~nA 99 (255)
T 3icc_A 79 LDNELQNRTGSTKFDILINNA 99 (255)
T ss_dssp HHHHHHHHHSSSCEEEEEECC
T ss_pred HHHHhcccccCCcccEEEECC
Confidence 13489988884
No 407
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.77 E-value=80 Score=28.90 Aligned_cols=78 Identities=12% Similarity=0.152 Sum_probs=46.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+.+ .-+++++.+ ..+.+|+.++.+.. ..+...++|++.|.. ..+.+|.++......+-
T Consensus 32 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 32 GKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSD--------ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 568999997653 233444433 12567888877532 123345566766543 45678988876543221
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 103 ~~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 103 MTGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 24789999873
No 408
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=23.67 E-value=3.2e+02 Score=24.08 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=42.3
Q ss_pred CCeEEEEecCChhHHHHHHHhhC----CCCcEEeccccCHHHHHHhhhhHHHHHHHHHhC--CCE-EEeecccCCcCccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFG----SASNICASSLDSYETVVKKFKEARSNLDTLKKL--GAS-IIHGVDATEMKEHS 110 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~g----s~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~--Gv~-VlhgVDATkL~~~~ 110 (421)
++++|+.|=+.+ .-+++++.+. .+.+|++++.+. +. .....++|++. |.. ..+.+|.++.....
T Consensus 6 ~k~~lVTGas~g-IG~~ia~~l~~~~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 76 (259)
T 1oaa_A 6 CAVCVLTGASRG-FGRALAPQLARLLSPGSVMLVSARSE-SM-------LRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76 (259)
T ss_dssp SEEEEESSCSSH-HHHHHHHHHHTTBCTTCEEEEEESCH-HH-------HHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred CcEEEEeCCCCh-HHHHHHHHHHHhhcCCCeEEEEeCCH-HH-------HHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence 346788886543 3444554442 367899987753 22 22334455543 444 45678988865432
Q ss_pred cc--------ccCccc--EEEEc
Q 014642 111 EL--------SKRKFD--RIIFN 123 (421)
Q Consensus 111 ~L--------k~~~FD--rIIFN 123 (421)
.+ ...++| .+|.|
T Consensus 77 ~~~~~~~~~~~~g~~d~~~lvnn 99 (259)
T 1oaa_A 77 RLLSAVRELPRPEGLQRLLLINN 99 (259)
T ss_dssp HHHHHHHHSCCCTTCCEEEEEEC
T ss_pred HHHHHHHhccccccCCccEEEEC
Confidence 21 123577 66665
No 409
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=23.62 E-value=75 Score=32.13 Aligned_cols=82 Identities=18% Similarity=0.028 Sum_probs=50.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHH--HhCCCEEEeecccCCcCccccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTL--KKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~L--r~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.+.+||=+|=|-=.+|.+|++. +..++|.-.+ ..+.+ -++.|++.+ .-..+++ ..-|+.+.-.. +..
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s--~~~l~---~Ar~N~~~~~~gl~~i~~-i~~Da~~~L~~--~~~ 161 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERN--DETAV---AARHNIPLLLNEGKDVNI-LTGDFKEYLPL--IKT 161 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESC--HHHHH---HHHHHHHHHSCTTCEEEE-EESCGGGSHHH--HHH
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHhHHHhccCCCcEEE-EECcHHHhhhh--ccC
Confidence 4689998988877888888875 3466666555 33333 367787765 2112333 44577663111 123
Q ss_pred CcccEEEEcCCCCCC
Q 014642 115 RKFDRIIFNFPHAGF 129 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~ 129 (421)
..||.|+.|-|--+.
T Consensus 162 ~~fDvV~lDPPrr~~ 176 (410)
T 3ll7_A 162 FHPDYIYVDPARRSG 176 (410)
T ss_dssp HCCSEEEECCEEC--
T ss_pred CCceEEEECCCCcCC
Confidence 579999999998874
No 410
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.51 E-value=1.2e+02 Score=27.47 Aligned_cols=79 Identities=13% Similarity=0.178 Sum_probs=46.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++|+.+ ..+.+|+.+...+.+.+ +...++|++.|.. ..+.+|.++......+
T Consensus 28 ~k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~ 99 (269)
T 4dmm_A 28 DRIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAA-------DEVVAAIAAAGGEAFAVKADVSQESEVEALFAA 99 (269)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 567888886542 344444443 13567888777655433 2334566666654 4567898887653222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 100 ~~~~~g~id~lv~nA 114 (269)
T 4dmm_A 100 VIERWGRLDVLVNNA 114 (269)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124789988874
No 411
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=23.39 E-value=65 Score=28.91 Aligned_cols=76 Identities=13% Similarity=0.042 Sum_probs=42.3
Q ss_pred CCeEEEEecCCh---hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDF---SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDF---SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L- 112 (421)
+++||+.|=+.+ ..+..|++. +.+|++++.+... .....+.++..|.. ..+.+|.++......+
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 102 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQA---GADVAIWYNSHPA--------DEKAEHLQKTYGVHSKAYKCNISDPKSVEETI 102 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHH---TCEEEEEESSSCC--------HHHHHHHHHHHCSCEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHH--------HHHHHHHHHhcCCcceEEEeecCCHHHHHHHH
Confidence 568999986543 445555543 4578887765421 11112233433433 4567888876543221
Q ss_pred c-----cCcccEEEEcC
Q 014642 113 S-----KRKFDRIIFNF 124 (421)
Q Consensus 113 k-----~~~FDrIIFNF 124 (421)
. ..++|.||.|=
T Consensus 103 ~~~~~~~g~id~li~~A 119 (279)
T 3ctm_A 103 SQQEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHHHSCCSEEEECG
T ss_pred HHHHHHhCCCCEEEECC
Confidence 1 14689999874
No 412
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=23.34 E-value=2.5e+02 Score=26.30 Aligned_cols=82 Identities=17% Similarity=0.136 Sum_probs=51.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHhhCC-CCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccccccc
Q 014642 36 SSKHQILLVGEGDFSFSFALSQKFGS-ASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSK 114 (421)
Q Consensus 36 ss~~rILLVGEGDFSFSlSLa~~~gs-~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~ 114 (421)
.++++||=||=|.=.++..|++.... ..+|+|.-.|. ++.+ .++++. ..++.+++ -|+.++.-......
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~--~~l~---~a~~~~----~~~v~~i~-~D~~~~~~~~~~~~ 110 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDR--DLIG---RLEQRF----GELLELHA-GDALTFDFGSIARP 110 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH--HHHH---HHHHHH----GGGEEEEE-SCGGGCCGGGGSCS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH--HHHH---HHHHhc----CCCcEEEE-CChhcCChhHhccc
Confidence 45789999999999999999987532 23488877763 2222 233341 23455554 48888753221111
Q ss_pred --CcccEEEEcCCCC
Q 014642 115 --RKFDRIIFNFPHA 127 (421)
Q Consensus 115 --~~FDrIIFNFPH~ 127 (421)
...++||-|.|--
T Consensus 111 ~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 111 GDEPSLRIIGNLPYN 125 (279)
T ss_dssp SSSCCEEEEEECCHH
T ss_pred ccCCceEEEEccCcc
Confidence 1346899999953
No 413
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=23.17 E-value=7e+02 Score=26.53 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=56.1
Q ss_pred cEEeccccCHHHHHHhhhhHHHHHHHHHhCCC---EEEeecccCCcCcccccccCcccEEEEcCCCCCCCCCcccHHHHH
Q 014642 64 NICASSLDSYETVVKKFKEARSNLDTLKKLGA---SIIHGVDATEMKEHSELSKRKFDRIIFNFPHAGFHGKEEDDEVIR 140 (421)
Q Consensus 64 nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv---~VlhgVDATkL~~~~~Lk~~~FDrIIFNFPH~G~~GkEd~~~~I~ 140 (421)
.|++.-.|. +.+ + -|+.|++ ..|+ .-+..-|+.++... .....||.||.|=|--...|.+. .
T Consensus 258 ~i~G~Did~-~av-~---~A~~N~~---~agv~~~i~~~~~D~~~~~~~--~~~~~~d~Iv~NPPYG~Rlg~~~---~-- 322 (703)
T 3v97_A 258 HFYGSDSDA-RVI-Q---RARTNAR---LAGIGELITFEVKDVAQLTNP--LPKGPYGTVLSNPPYGERLDSEP---A-- 322 (703)
T ss_dssp CEEEEESCH-HHH-H---HHHHHHH---HTTCGGGEEEEECCGGGCCCS--CTTCCCCEEEECCCCCC---CCH---H--
T ss_pred cEEEEECCH-HHH-H---HHHHHHH---HcCCCCceEEEECChhhCccc--cccCCCCEEEeCCCccccccchh---H--
Confidence 566655553 222 2 2556654 3454 35566788776432 11237999999988732222221 1
Q ss_pred HhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEeeCC
Q 014642 141 MHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQFR 196 (421)
Q Consensus 141 ~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~F~ 196 (421)
-..|...+-. ..+.+.++|.+.|-..+. ++.+..|+...++.++.
T Consensus 323 -l~~ly~~l~~-~lk~~~~g~~~~ilt~~~---------~l~~~~glk~~k~~~l~ 367 (703)
T 3v97_A 323 -LIALHSLLGR-IMKNQFGGWNLSLFSASP---------DLLSCLQLRADKQYKAK 367 (703)
T ss_dssp -HHHHHHHHHH-HHHHHCTTCEEEEEESCH---------HHHHTTCCCEEEEEEEE
T ss_pred -HHHHHHHHHH-HHHhhCCCCeEEEEeCCH---------HHHHHhCCCcccceeee
Confidence 1223333322 222344799988775543 36677777766665543
No 414
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=23.08 E-value=83 Score=29.97 Aligned_cols=43 Identities=23% Similarity=0.328 Sum_probs=28.3
Q ss_pred HHHHHHhCCCEEEeecccCCcCccc-ccc---cCcccEEEEcCCCCC
Q 014642 86 NLDTLKKLGASIIHGVDATEMKEHS-ELS---KRKFDRIIFNFPHAG 128 (421)
Q Consensus 86 Nl~~Lr~~Gv~VlhgVDATkL~~~~-~Lk---~~~FDrIIFNFPH~G 128 (421)
-.+.|++.|++++.+...+++.... .+. ...+|.||+--|..+
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCc
Confidence 3556889999999987666665421 111 246999999755443
No 415
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.69 E-value=1.2e+02 Score=27.19 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=46.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc--
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-- 112 (421)
++++||+.|=+.+ .-+++++.+ ..+.+|+.+.-.+.+.+ +...++|++.|.. ..+.+|.++......+
T Consensus 3 ~~k~vlVTGas~g-IG~aia~~l~~~G~~vv~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (258)
T 3oid_A 3 QNKCALVTGSSRG-VGKAAAIRLAENGYNIVINYARSKKAA-------LETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ 74 (258)
T ss_dssp CCCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEecCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4568898886543 344444443 23567777633333322 3345667777654 4567898887653222
Q ss_pred ----ccCcccEEEEcC
Q 014642 113 ----SKRKFDRIIFNF 124 (421)
Q Consensus 113 ----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 75 ~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 75 QIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 125789988873
No 416
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.63 E-value=2.1e+02 Score=21.49 Aligned_cols=73 Identities=22% Similarity=0.358 Sum_probs=40.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCC-CcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSA-SNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~-~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+||++|=|..--+ +++.+ ..+ ..|++...+. +.++.+...|+.+ +.+|.++......+ -.
T Consensus 5 ~~~v~I~G~G~iG~~--~~~~l~~~g~~~v~~~~r~~------------~~~~~~~~~~~~~-~~~d~~~~~~~~~~-~~ 68 (118)
T 3ic5_A 5 RWNICVVGAGKIGQM--IAALLKTSSNYSVTVADHDL------------AALAVLNRMGVAT-KQVDAKDEAGLAKA-LG 68 (118)
T ss_dssp CEEEEEECCSHHHHH--HHHHHHHCSSEEEEEEESCH------------HHHHHHHTTTCEE-EECCTTCHHHHHHH-TT
T ss_pred cCeEEEECCCHHHHH--HHHHHHhCCCceEEEEeCCH------------HHHHHHHhCCCcE-EEecCCCHHHHHHH-Hc
Confidence 358999998765433 33322 123 5687776642 1234445667765 44576654322111 14
Q ss_pred cccEEEEcCCC
Q 014642 116 KFDRIIFNFPH 126 (421)
Q Consensus 116 ~FDrIIFNFPH 126 (421)
..|.||..-|.
T Consensus 69 ~~d~vi~~~~~ 79 (118)
T 3ic5_A 69 GFDAVISAAPF 79 (118)
T ss_dssp TCSEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 68998887653
No 417
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=22.58 E-value=4.1e+02 Score=24.05 Aligned_cols=83 Identities=8% Similarity=0.102 Sum_probs=47.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHH--HHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYE--TVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~e--eL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L- 112 (421)
++++|+.|=+.. .-+++|+.+ ..+.+|++++.+... ++.+ ..++..++++..|.. ..+.+|.++......+
T Consensus 9 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 9 GKTMFISGGSRG-IGLAIAKRVAADGANVALVAKSAEPHPKLPG---TIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHTTTCEEEEEESCCSCCSSSCC---CHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECChhhhhhhhH---HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 567899986543 444555444 235688888876431 1100 123344556666655 4566798887653322
Q ss_pred -----ccCcccEEEEcC
Q 014642 113 -----SKRKFDRIIFNF 124 (421)
Q Consensus 113 -----k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 85 ~~~~~~~g~id~lvnnA 101 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNA 101 (285)
T ss_dssp HHHHHHHSCCSEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 124789888873
No 418
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.37 E-value=73 Score=28.53 Aligned_cols=53 Identities=9% Similarity=0.078 Sum_probs=41.0
Q ss_pred CeEEEEecCChhHHHHH-HHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEee
Q 014642 39 HQILLVGEGDFSFSFAL-SQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHG 100 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSL-a~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~Vlhg 100 (421)
.+|-+||=+|....+.. ...+ +.+|.--++++++++. +-+++|++.|+.|+-|
T Consensus 95 ~kIavvg~~~~~~~~~~~~~ll--~~~i~~~~~~~~~e~~-------~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 95 NELALIAYKHSIVDKHEIEAML--GVKIKEFLFSSEDEIT-------TLISKVKTENIKIVVS 148 (196)
T ss_dssp SEEEEEEESSCSSCHHHHHHHH--TCEEEEEEECSGGGHH-------HHHHHHHHTTCCEEEE
T ss_pred CcEEEEeCcchhhHHHHHHHHh--CCceEEEEeCCHHHHH-------HHHHHHHHCCCeEEEC
Confidence 38999999998887665 4555 4567777888876663 4689999999998887
No 419
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=22.32 E-value=57 Score=28.83 Aligned_cols=45 Identities=11% Similarity=0.313 Sum_probs=29.8
Q ss_pred cCCC-CeEEEEecCChhHHHHHHHh----hCCCCcEEeccc--cCHHHHHHhhh
Q 014642 35 YSSK-HQILLVGEGDFSFSFALSQK----FGSASNICASSL--DSYETVVKKFK 81 (421)
Q Consensus 35 Yss~-~rILLVGEGDFSFSlSLa~~----~gs~~nLvATSl--DS~eeL~~KY~ 81 (421)
|... ..|++++=|+ ||.+|+.. +|...++.|-++ |+.+++.+|+.
T Consensus 17 ~~~~~~~iII~sHG~--~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~~ 68 (159)
T 3mtq_A 17 FQGMKRHYIFASHGS--FANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQVE 68 (159)
T ss_dssp CSSCCEEEEEEEETT--HHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHHH
T ss_pred hhccCceEEEEeCcH--HHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHHH
Confidence 4444 3699999998 78888764 366567877665 44345655533
No 420
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=22.28 E-value=1.3e+02 Score=27.00 Aligned_cols=79 Identities=13% Similarity=0.114 Sum_probs=44.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CE-EEeecccCCcCccccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--AS-IIHGVDATEMKEHSEL 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~-VlhgVDATkL~~~~~L 112 (421)
++++||+.|=+.+ ..++|++.+ ..+.+|++++.+. +.+ ....++|++.| .. ..+.+|.++......+
T Consensus 31 ~~k~vlVTGasgg-IG~~la~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 101 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQQGLKVVGCARTV-GNI-------EELAAECKSAGYPGTLIPYRCDLSNEEDILSM 101 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEECCh-HHH-------HHHHHHHHhcCCCceEEEEEecCCCHHHHHHH
Confidence 3568999986553 234444433 1256788887753 222 22344566655 33 4567888876543221
Q ss_pred c------cCcccEEEEcC
Q 014642 113 S------KRKFDRIIFNF 124 (421)
Q Consensus 113 k------~~~FDrIIFNF 124 (421)
- ...+|.||.|=
T Consensus 102 ~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 102 FSAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHHCCCSEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 1 14689888774
No 421
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=22.08 E-value=1.2e+02 Score=26.41 Aligned_cols=79 Identities=13% Similarity=0.215 Sum_probs=44.3
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-c-
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-S- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-k- 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+..+. .....++|+..|.. ..+..|.++......+ .
T Consensus 7 ~k~vlVTGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (258)
T 3afn_B 7 GKRVLITGSSQG-IGLATARLFARAGAKVGLHGRKAPAN-------IDETIASMRADGGDAAFFAADLATSEACQQLVDE 78 (258)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCCTT-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEECCCchhh-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 467899886554 233444433 1256788887763221 22234456665654 3566788876543221 1
Q ss_pred ----cCcccEEEEcC
Q 014642 114 ----KRKFDRIIFNF 124 (421)
Q Consensus 114 ----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 79 ~~~~~g~id~vi~~A 93 (258)
T 3afn_B 79 FVAKFGGIDVLINNA 93 (258)
T ss_dssp HHHHHSSCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13789998874
No 422
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=22.01 E-value=1e+02 Score=27.53 Aligned_cols=78 Identities=13% Similarity=0.212 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ ....++|++.|.. ..+.+|.++......+
T Consensus 5 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (260)
T 2qq5_A 5 GQVCVVTGASRG-IGRGIALQLCKAGATVYITGRHL-DTL-------RVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ 75 (260)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence 467888885543 444555443 1356788887653 222 2234456555654 3567888886543221
Q ss_pred ---c-cCcccEEEEcC
Q 014642 113 ---S-KRKFDRIIFNF 124 (421)
Q Consensus 113 ---k-~~~FDrIIFNF 124 (421)
. ..+.|.+|.|=
T Consensus 76 ~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 76 VDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHTTCCCEEEECC
T ss_pred HHHhcCCCceEEEECC
Confidence 0 35789998885
No 423
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=21.96 E-value=93 Score=27.68 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ +...++|++.|..+ .+.+|.++......+
T Consensus 14 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 14 NKVALVTASTDG-IGLAIARRLAQDGAHVVVSSRKQ-ENV-------DRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 467899986653 234444433 1256888887763 222 22345666666543 456788876543221
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
.....|.||.|=
T Consensus 85 ~~~~~g~iD~lv~~A 99 (260)
T 2zat_A 85 AVNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124789998874
No 424
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=21.91 E-value=1.7e+02 Score=28.45 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=60.2
Q ss_pred ccCCCCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEe-ecccCCcCccc
Q 014642 34 HYSSKHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIH-GVDATEMKEHS 110 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~Vlh-gVDATkL~~~~ 110 (421)
...+..+||=+|=|-=+||.-.++..+ ...++|...- .++..+ |-. .+..| +.++. ++|+.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVG--vDl~~~-pi~------~~~~g~~ii~~~~~~dv~------ 134 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLG--RDGHEK-PMN------VQSLGWNIITFKDKTDIH------ 134 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCC--CTTCCC-CCC------CCBTTGGGEEEECSCCTT------
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEe--ccCccc-ccc------cCcCCCCeEEEeccceeh------
Confidence 455677898899888888886665432 1233332221 001000 000 01112 11111 22322
Q ss_pred ccccCcccEEEEcC-CCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCC-CeEEEEecC
Q 014642 111 ELSKRKFDRIIFNF-PHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPR-GEVHVSHKT 169 (421)
Q Consensus 111 ~Lk~~~FDrIIFNF-PH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~-GeIHVTLk~ 169 (421)
.+....||.|+-+. |++|. . .+..-+.+-. +.-|.++|+|+ |...+-+.+
T Consensus 135 ~l~~~~~DlVlsD~apnsG~---~----~~D~~rs~~L--L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGESSSS---S----VTEGERTVRV--LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp TSCCCCCSEEEECCCCCCSC---H----HHHHHHHHHH--HHHHHHHHTTCCSEEEEEESC
T ss_pred hcCCCCccEEEecCccCcCc---h----HHHHHHHHHH--HHHHHHHhCCCCCeEEEEecC
Confidence 34567899999997 77553 1 1222222211 77789999999 999998888
No 425
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=21.85 E-value=1.5e+02 Score=27.80 Aligned_cols=96 Identities=17% Similarity=0.254 Sum_probs=56.2
Q ss_pred cCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-ccc
Q 014642 35 YSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SEL 112 (421)
Q Consensus 35 Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~L 112 (421)
...+++||++|=|..- .+..||++.| .+|++|+.+. +.++.++++|+....+.+..++.+. ..+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~d~~~~~~~~~~~~~ 227 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGD------------EKLELAKELGADLVVNPLKEDAAKFMKEK 227 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCH------------HHHHHHHHTTCSEEECTTTSCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHHCCCCEEecCCCccHHHHHHHH
Confidence 4568899999988743 3444566665 4899988652 1244567788865443322122111 011
Q ss_pred ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEE
Q 014642 113 SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHV 165 (421)
Q Consensus 113 k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHV 165 (421)
. ..+|.||-+ +|. . .-+..+.++|+++|.|.+
T Consensus 228 ~-~~~d~vid~---~g~---~--------------~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 228 V-GGVHAAVVT---AVS---K--------------PAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp H-SSEEEEEES---SCC---H--------------HHHHHHHHHEEEEEEEEE
T ss_pred h-CCCCEEEEC---CCC---H--------------HHHHHHHHHhhcCCEEEE
Confidence 1 468988754 342 0 134566778899997654
No 426
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=21.66 E-value=90 Score=29.38 Aligned_cols=93 Identities=11% Similarity=0.125 Sum_probs=52.4
Q ss_pred CeEEEE-ecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCccc-cc-cc
Q 014642 39 HQILLV-GEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHS-EL-SK 114 (421)
Q Consensus 39 ~rILLV-GEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~-~L-k~ 114 (421)
++||+. |-|..- .+..||++.| .+|++|+...+ .++.++++|+....+.+..++.+.. .+ .+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G--a~Vi~~~~~~~------------~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~ 231 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG--FRPIVTVRRDE------------QIALLKDIGAAHVLNEKAPDFEATLREVMKA 231 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESCGG------------GHHHHHHHTCSEEEETTSTTHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCCEEEECCcHHHHHHHHHHhcC
Confidence 455554 777664 4445577776 38999976432 2445667788755544433322210 11 12
Q ss_pred CcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 115 RKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 115 ~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..+|.|+=+ +|. ..+..+..+|+++|.|.+.
T Consensus 232 ~g~D~vid~---~g~------------------~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 232 EQPRIFLDA---VTG------------------PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp HCCCEEEES---SCH------------------HHHHHHHHHSCTTCEEEEC
T ss_pred CCCcEEEEC---CCC------------------hhHHHHHhhhcCCCEEEEE
Confidence 468977542 442 0124566789999987654
No 427
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=21.52 E-value=99 Score=27.68 Aligned_cols=79 Identities=13% Similarity=0.204 Sum_probs=45.3
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-EEEeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA-SIIHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv-~VlhgVDATkL~~~~~L--- 112 (421)
+++||+.|=+.+ .-++|++.+ ..+.+|+.+...+.+.+ ++.+++|++.|. ...+.+|.++......+
T Consensus 26 ~k~vlVTGas~g-IG~~la~~l~~~G~~v~i~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 26 SRSVLVTGASKG-IGRAIARQLAADGFNIGVHYHRDAAGA-------QETLNAIVANGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp CCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 467899986543 344555443 13456755444443332 334666766654 35567898887653222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 98 ~~~~~g~id~li~nA 112 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNA 112 (267)
T ss_dssp HHHHHCCCSEEEECC
T ss_pred HHHHhCCccEEEECC
Confidence 125789998873
No 428
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=21.48 E-value=1e+02 Score=28.75 Aligned_cols=78 Identities=17% Similarity=0.233 Sum_probs=48.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~L--- 112 (421)
++.+|+.|=+- -.-+++|+.| ..+.+|+.+..+. +. .++.+++|++.|.++ .+.+|.++-.....+
T Consensus 9 gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~-~~-------~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 9 GKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRA-TL-------LAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCH-HH-------HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCH-HH-------HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence 56677777443 3444444444 2356899887753 33 234577888887664 467888886654322
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
+..+.|.+|-|=
T Consensus 80 ~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 80 LDAEGIHVDILINNA 94 (255)
T ss_dssp HHHTTCCCCEEEECC
T ss_pred HHHHCCCCcEEEECC
Confidence 236789999884
No 429
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.46 E-value=1.2e+02 Score=26.31 Aligned_cols=78 Identities=15% Similarity=0.225 Sum_probs=42.7
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEec-cccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc-c
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICAS-SLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL-S 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvAT-SlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L-k 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|+++ ..+. +. .....+.|++.|.. ..+.+|.++......+ .
T Consensus 5 ~~~vlItGasgg-iG~~~a~~l~~~G~~V~~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (247)
T 2hq1_A 5 GKTAIVTGSSRG-LGKAIAWKLGNMGANIVLNGSPAS-TS-------LDATAEEFKAAGINVVVAKGDVKNPEDVENMVK 75 (247)
T ss_dssp TCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECTTC-SH-------HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CcEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCcCH-HH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467899986644 233444333 124578877 3332 11 12234556666644 4567888876543221 1
Q ss_pred -----cCcccEEEEcC
Q 014642 114 -----KRKFDRIIFNF 124 (421)
Q Consensus 114 -----~~~FDrIIFNF 124 (421)
....|.||.|=
T Consensus 76 ~~~~~~~~~d~vi~~A 91 (247)
T 2hq1_A 76 TAMDAFGRIDILVNNA 91 (247)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 14789988873
No 430
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=21.45 E-value=1.4e+02 Score=26.33 Aligned_cols=79 Identities=13% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKEHSEL--- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~~~~L--- 112 (421)
++++|+.|=+.+ .-+++++.+ ..+.+|+.+...+.+.+ +...++|++.|..+ .+.+|.++......+
T Consensus 4 ~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 75 (246)
T 3osu_A 4 TKSALVTGASRG-IGRSIALQLAEEGYNVAVNYAGSKEKA-------EAVVEEIKAKGVDSFAIQANVADADEVKAMIKE 75 (246)
T ss_dssp SCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 457888886643 234444433 13567887766655433 23355677776554 567888886653222
Q ss_pred ---ccCcccEEEEcC
Q 014642 113 ---SKRKFDRIIFNF 124 (421)
Q Consensus 113 ---k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 76 ~~~~~g~id~lv~nA 90 (246)
T 3osu_A 76 VVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124789988874
No 431
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=21.33 E-value=3.7e+02 Score=25.59 Aligned_cols=125 Identities=18% Similarity=0.313 Sum_probs=70.2
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccccCcc
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELSKRKF 117 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk~~~F 117 (421)
..|||++|=|.. ...+++.+....+|+....+. ++++.+++... -..+|+++...-..+ -...
T Consensus 16 ~mkilvlGaG~v--G~~~~~~L~~~~~v~~~~~~~------------~~~~~~~~~~~--~~~~d~~d~~~l~~~-~~~~ 78 (365)
T 3abi_A 16 HMKVLILGAGNI--GRAIAWDLKDEFDVYIGDVNN------------ENLEKVKEFAT--PLKVDASNFDKLVEV-MKEF 78 (365)
T ss_dssp CCEEEEECCSHH--HHHHHHHHTTTSEEEEEESCH------------HHHHHHTTTSE--EEECCTTCHHHHHHH-HTTC
T ss_pred ccEEEEECCCHH--HHHHHHHHhcCCCeEEEEcCH------------HHHHHHhccCC--cEEEecCCHHHHHHH-HhCC
Confidence 348999998765 455566664444565544332 23444544332 246788765432221 2457
Q ss_pred cEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEEecCCCCcCcccHHHHHHhCCcEEEEEeeCCC
Q 014642 118 DRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVSHKTTAPFCKWHIEELARKHSLLRLDCVQFRK 197 (421)
Q Consensus 118 DrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVTLk~g~PY~sWnI~~LAa~aGL~L~~~~~F~~ 197 (421)
|.||-=-|-. .|-.++..-.++ |.=.|++.. .+-..+.+.+.|+++|..++-..-|+
T Consensus 79 DvVi~~~p~~-------------~~~~v~~~~~~~--------g~~yvD~s~-~~~~~~~l~~~a~~~g~~~i~~~G~~- 135 (365)
T 3abi_A 79 ELVIGALPGF-------------LGFKSIKAAIKS--------KVDMVDVSF-MPENPLELRDEAEKAQVTIVFDAGFA- 135 (365)
T ss_dssp SEEEECCCGG-------------GHHHHHHHHHHH--------TCEEEECCC-CSSCGGGGHHHHHHTTCEEECCCBTT-
T ss_pred CEEEEecCCc-------------ccchHHHHHHhc--------CcceEeeec-cchhhhhhhhhhccCCceeeecCCCC-
Confidence 9887533211 244444443333 444455543 33466889999999999888766555
Q ss_pred CCCCCCcc
Q 014642 198 EDYPGYSN 205 (421)
Q Consensus 198 ~~YPGY~h 205 (421)
||-.|
T Consensus 136 ---PG~~~ 140 (365)
T 3abi_A 136 ---PGLSN 140 (365)
T ss_dssp ---TBHHH
T ss_pred ---CchHH
Confidence 55544
No 432
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=21.22 E-value=59 Score=31.28 Aligned_cols=99 Identities=19% Similarity=0.305 Sum_probs=57.7
Q ss_pred cCCCCeEEEEecCChh-HHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecc---cCCcCcc-
Q 014642 35 YSSKHQILLVGEGDFS-FSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVD---ATEMKEH- 109 (421)
Q Consensus 35 Yss~~rILLVGEGDFS-FSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVD---ATkL~~~- 109 (421)
...+++||++|-|..- ++..||++.| +.+|+||+... +.++.++++|+...+..+ ..++.+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSP------------NRLKLAEEIGADLTLNRRETSVEERRKAI 259 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCH------------HHHHHHHHcCCcEEEeccccCcchHHHHH
Confidence 4567899999966543 4455567764 35899987542 235567788987554443 1111110
Q ss_pred ccc-ccCcccEEEEcCCCCCCCCCcccHHHHHHhHHHHHHHHHhhHhccCCCCeEEEE
Q 014642 110 SEL-SKRKFDRIIFNFPHAGFHGKEEDDEVIRMHMSLVEGFFRNASGMLRPRGEVHVS 166 (421)
Q Consensus 110 ~~L-k~~~FDrIIFNFPH~G~~GkEd~~~~I~~nr~LL~~FF~SA~~lL~~~GeIHVT 166 (421)
..+ .+..+|.||=+ +|. . ..+..+.++|+++|.|.+.
T Consensus 260 ~~~~~g~g~Dvvid~---~g~--~---------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 260 MDITHGRGADFILEA---TGD--S---------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp HHHTTTSCEEEEEEC---SSC--T---------------THHHHHHHHEEEEEEEEEC
T ss_pred HHHhCCCCCcEEEEC---CCC--H---------------HHHHHHHHHHhcCCEEEEE
Confidence 011 23469987644 332 1 1345667789999986543
No 433
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=21.19 E-value=80 Score=27.57 Aligned_cols=78 Identities=10% Similarity=0.119 Sum_probs=43.0
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccccc---
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSELS--- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~Lk--- 113 (421)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+. +.+ +...++++..+-...+.+|.++......+-
T Consensus 6 ~k~vlVtGasgg-iG~~~a~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 6 GKVAIITGGTLG-IGLAIATKFVEEGAKVMITGRHS-DVG-------EKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHhhccCceEEEECCCCCHHHHHHHHHHH
Confidence 467899986653 344444443 1256788887753 221 122334443333445678888765432211
Q ss_pred ---cCcccEEEEcC
Q 014642 114 ---KRKFDRIIFNF 124 (421)
Q Consensus 114 ---~~~FDrIIFNF 124 (421)
..++|.||.|=
T Consensus 77 ~~~~~~id~li~~A 90 (251)
T 1zk4_A 77 EKAFGPVSTLVNNA 90 (251)
T ss_dssp HHHHSSCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 14689988874
No 434
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.93 E-value=1.3e+02 Score=26.77 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=44.5
Q ss_pred CeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCE-EEeecccCCcCccccc----
Q 014642 39 HQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGAS-IIHGVDATEMKEHSEL---- 112 (421)
Q Consensus 39 ~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDATkL~~~~~L---- 112 (421)
++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ +...++|++.|.. ..+.+|.++......+
T Consensus 3 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 73 (256)
T 1geg_A 3 KVALVTGAGQG-IGKAIALRLVKDGFAVAIADYND-ATA-------KAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA 73 (256)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 57899986654 344454443 1256788887753 222 2234556665643 4567898876543222
Q ss_pred --ccCcccEEEEcC
Q 014642 113 --SKRKFDRIIFNF 124 (421)
Q Consensus 113 --k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 74 ~~~~g~id~lv~nA 87 (256)
T 1geg_A 74 RKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHTTCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 124789988874
No 435
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=20.90 E-value=60 Score=31.26 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=43.4
Q ss_pred CCCCeEEEE--ecCCh-hHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcc-cc
Q 014642 36 SSKHQILLV--GEGDF-SFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEH-SE 111 (421)
Q Consensus 36 ss~~rILLV--GEGDF-SFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~-~~ 111 (421)
.++++||++ |-|.. ..+..||++.| .+|+||.... ++++.++++|+...++.+..++.+. ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~~~~~~~~~~v~~ 234 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQ------------EQADLLKAQGAVHVCNAASPTFMQDLTE 234 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSH------------HHHHHHHHTTCSCEEETTSTTHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCH------------HHHHHHHhCCCcEEEeCCChHHHHHHHH
Confidence 467899999 66665 45556678876 3789886431 2466778899875554433332221 01
Q ss_pred c-ccCcccEEEE
Q 014642 112 L-SKRKFDRIIF 122 (421)
Q Consensus 112 L-k~~~FDrIIF 122 (421)
+ .++.+|.|+=
T Consensus 235 ~t~~~g~d~v~d 246 (379)
T 3iup_A 235 ALVSTGATIAFD 246 (379)
T ss_dssp HHHHHCCCEEEE
T ss_pred HhcCCCceEEEE
Confidence 1 2346897653
No 436
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=20.87 E-value=1.8e+02 Score=26.69 Aligned_cols=80 Identities=13% Similarity=0.163 Sum_probs=47.7
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccC-----------HHHHHHhhhhHHHHHHHHHhCCCE-EEeeccc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDS-----------YETVVKKFKEARSNLDTLKKLGAS-IIHGVDA 103 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS-----------~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDA 103 (421)
+++++|+.|=+.. .-+++|+.+ ..+.+|+++..+. .+. ..+.+++|+..|.. +.+.+|.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv 98 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDD-------LAETVRQVEALGRRIIASQVDV 98 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHH-------HHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHH-------HHHHHHHHHhcCCceEEEECCC
Confidence 3568999997652 334444433 1356788776541 222 23346677777654 4578899
Q ss_pred CCcCccccc------ccCcccEEEEcC
Q 014642 104 TEMKEHSEL------SKRKFDRIIFNF 124 (421)
Q Consensus 104 TkL~~~~~L------k~~~FDrIIFNF 124 (421)
++......+ ...+.|.+|.|=
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 887654322 125789988873
No 437
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.72 E-value=1.3e+02 Score=27.08 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=46.5
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSEL-- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~L-- 112 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.++.+.. . .+...++|++.| -...+.+|.++......+
T Consensus 10 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (262)
T 3pk0_A 10 GRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRSTA-D-------IDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80 (262)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHH
Confidence 567888885542 334444443 13568888877632 2 234566777765 345678899887654322
Q ss_pred ----ccCcccEEEEc
Q 014642 113 ----SKRKFDRIIFN 123 (421)
Q Consensus 113 ----k~~~FDrIIFN 123 (421)
...+.|.+|.|
T Consensus 81 ~~~~~~g~id~lvnn 95 (262)
T 3pk0_A 81 RAVEEFGGIDVVCAN 95 (262)
T ss_dssp HHHHHHSCCSEEEEC
T ss_pred HHHHHhCCCCEEEEC
Confidence 12478999887
No 438
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=20.67 E-value=2.5e+02 Score=24.55 Aligned_cols=74 Identities=12% Similarity=0.130 Sum_probs=41.0
Q ss_pred CCeEEEEecCChhHHHHHHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEEEeecccCCcCcccc----c-
Q 014642 38 KHQILLVGEGDFSFSFALSQKFGSASNICASSLDSYETVVKKFKEARSNLDTLKKLGASIIHGVDATEMKEHSE----L- 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~VlhgVDATkL~~~~~----L- 112 (421)
+++||+.|=+.+ .-++||+.+..+.+|++++.+. +. ++.+.+..-......|.++...... +
T Consensus 5 ~k~vlITGas~g-IG~~~a~~l~~g~~v~~~~r~~-~~-----------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (245)
T 3e9n_A 5 KKIAVVTGATGG-MGIEIVKDLSRDHIVYALGRNP-EH-----------LAALAEIEGVEPIESDIVKEVLEEGGVDKLK 71 (245)
T ss_dssp -CEEEEESTTSH-HHHHHHHHHTTTSEEEEEESCH-HH-----------HHHHHTSTTEEEEECCHHHHHHTSSSCGGGT
T ss_pred CCEEEEEcCCCH-HHHHHHHHHhCCCeEEEEeCCH-HH-----------HHHHHhhcCCcceecccchHHHHHHHHHHHH
Confidence 467899996653 4566666664456788887653 21 2233333333455667665422111 1
Q ss_pred ccCcccEEEEcC
Q 014642 113 SKRKFDRIIFNF 124 (421)
Q Consensus 113 k~~~FDrIIFNF 124 (421)
...+.|.||.|=
T Consensus 72 ~~~~id~lv~~A 83 (245)
T 3e9n_A 72 NLDHVDTLVHAA 83 (245)
T ss_dssp TCSCCSEEEECC
T ss_pred hcCCCCEEEECC
Confidence 124789998873
No 439
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.65 E-value=1.1e+02 Score=28.41 Aligned_cols=78 Identities=18% Similarity=0.222 Sum_probs=47.3
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCC--CEEEeecccCCcCccccc-
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLG--ASIIHGVDATEMKEHSEL- 112 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~G--v~VlhgVDATkL~~~~~L- 112 (421)
++++||+.|=+.+ .-+++|+.+ ..+.+|+.+..+.. ..+...++|++.| -...+.+|.++......+
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~ 110 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPR--------ELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA 110 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHH--------HHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence 3568888886653 334444433 13568888877632 2334566777765 345578899887653222
Q ss_pred -----ccCcccEEEEc
Q 014642 113 -----SKRKFDRIIFN 123 (421)
Q Consensus 113 -----k~~~FDrIIFN 123 (421)
...+.|.+|.|
T Consensus 111 ~~~~~~~g~iD~lvnn 126 (293)
T 3rih_A 111 RTVVDAFGALDVVCAN 126 (293)
T ss_dssp HHHHHHHSCCCEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 12578988877
No 440
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=20.60 E-value=1.3e+02 Score=26.21 Aligned_cols=77 Identities=18% Similarity=0.239 Sum_probs=42.8
Q ss_pred CCeEEEEecCCh---hHHHHHHHhhCCCC-----cEEeccccCHHHHHHhhhhHHHHHHHHHhCCCEE-EeecccCCcCc
Q 014642 38 KHQILLVGEGDF---SFSFALSQKFGSAS-----NICASSLDSYETVVKKFKEARSNLDTLKKLGASI-IHGVDATEMKE 108 (421)
Q Consensus 38 ~~rILLVGEGDF---SFSlSLa~~~gs~~-----nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv~V-lhgVDATkL~~ 108 (421)
+++||+.|=+.+ ..+..|++. |... +|++++.+. +.+ +...++|+..|..+ .+.+|.++...
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTA-ADL-------EKISLECRAEGALTDTITADISDMAD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCH-HHH-------HHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCH-HHH-------HHHHHHHHccCCeeeEEEecCCCHHH
Confidence 357899996654 333444433 2111 788887653 222 22344566666553 56788887654
Q ss_pred cccc------ccCcccEEEEc
Q 014642 109 HSEL------SKRKFDRIIFN 123 (421)
Q Consensus 109 ~~~L------k~~~FDrIIFN 123 (421)
...+ .....|.||.|
T Consensus 73 v~~~~~~~~~~~g~id~li~~ 93 (244)
T 2bd0_A 73 VRRLTTHIVERYGHIDCLVNN 93 (244)
T ss_dssp HHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 3221 12478999877
No 441
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=20.56 E-value=1.5e+02 Score=26.72 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=46.1
Q ss_pred CCCeEEEEecCChhHHHHHHHhh-CCCCcEEecccc------------CHHHHHHhhhhHHHHHHHHHhCCCE-EEeecc
Q 014642 37 SKHQILLVGEGDFSFSFALSQKF-GSASNICASSLD------------SYETVVKKFKEARSNLDTLKKLGAS-IIHGVD 102 (421)
Q Consensus 37 s~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlD------------S~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVD 102 (421)
+++++|+.|=+.. .-+++|+.+ ..+.+|+++..+ +.+.+ ++.++.++..|.. +.+.+|
T Consensus 10 ~~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D 81 (277)
T 3tsc_A 10 EGRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDL-------SETVRLVEAANRRIVAAVVD 81 (277)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHH-------HHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHH-------HHHHHHHHhcCCeEEEEECC
Confidence 3568899996542 334444433 135678887653 33332 2345566666654 456788
Q ss_pred cCCcCcccccc------cCcccEEEEcC
Q 014642 103 ATEMKEHSELS------KRKFDRIIFNF 124 (421)
Q Consensus 103 ATkL~~~~~Lk------~~~FDrIIFNF 124 (421)
.++......+- ..+.|.+|.|=
T Consensus 82 ~~~~~~v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 82 TRDFDRLRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 88876533221 25789988873
No 442
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=20.56 E-value=1.5e+02 Score=26.65 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=45.3
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccC-----------HHHHHHhhhhHHHHHHHHHhCCCE-EEeecccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDS-----------YETVVKKFKEARSNLDTLKKLGAS-IIHGVDAT 104 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS-----------~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDAT 104 (421)
++++|+.|=+.+ --+++|+.+ ..+.+|+++..+. .+.+ ....+.++..|.. ..+.+|.+
T Consensus 13 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~ 84 (278)
T 3sx2_A 13 GKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEEL-------AATVKLVEDIGSRIVARQADVR 84 (278)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHH-------HHHHHHHHHHTCCEEEEECCTT
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHH-------HHHHHHHHhcCCeEEEEeCCCC
Confidence 568999996543 333444333 1356788877652 3332 2234455555544 55678998
Q ss_pred CcCcccccc------cCcccEEEEcC
Q 014642 105 EMKEHSELS------KRKFDRIIFNF 124 (421)
Q Consensus 105 kL~~~~~Lk------~~~FDrIIFNF 124 (421)
+......+- ..+.|.+|.|=
T Consensus 85 ~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 85 DRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 876543221 24789988874
No 443
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=20.49 E-value=80 Score=32.58 Aligned_cols=67 Identities=12% Similarity=0.267 Sum_probs=37.4
Q ss_pred ccCCCCeEEEEecCChhHHHH-HHHhhCCCCcEEeccccCHHHHHHhhhhHHHHHHH-HHhC----CCEEEeecccCCcC
Q 014642 34 HYSSKHQILLVGEGDFSFSFA-LSQKFGSASNICASSLDSYETVVKKFKEARSNLDT-LKKL----GASIIHGVDATEMK 107 (421)
Q Consensus 34 ~Yss~~rILLVGEGDFSFSlS-La~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~-Lr~~----Gv~VlhgVDATkL~ 107 (421)
.|-.+.+|++.||.++.++++ +...+|-..-.++|...+.+ |. +-+++ |+.. ++.|+.+.|...|.
T Consensus 356 ~~l~Gkrv~i~gd~~~~~~la~~L~ElGm~vv~v~~~~~~~~-----~~---~~~~~ll~~~~~~~~~~v~~~~d~~~l~ 427 (519)
T 1qgu_B 356 TWLHGKKFGLYGDPDFVMGLTRFLLELGCEPTVILSHNANKR-----WQ---KAMNKMLDASPYGRDSEVFINCDLWHFR 427 (519)
T ss_dssp HHHTTCEEEEESCHHHHHHHHHHHHHTTCEEEEEEETTCCHH-----HH---HHHHHHHHHSTTCTTCEEEESCCHHHHH
T ss_pred HHcCCCEEEEECCchHHHHHHHHHHHCCCEEEEEEeCCCCHH-----HH---HHHHHHHHhcCCCCCCEEEECCCHHHHH
Confidence 345678999999998877755 23455533223344433322 11 11222 3332 57788887777664
Q ss_pred c
Q 014642 108 E 108 (421)
Q Consensus 108 ~ 108 (421)
+
T Consensus 428 ~ 428 (519)
T 1qgu_B 428 S 428 (519)
T ss_dssp H
T ss_pred H
Confidence 3
No 444
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=20.27 E-value=1.3e+02 Score=27.49 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=44.9
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC-EEEeecccCCcCcccccc--
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA-SIIHGVDATEMKEHSELS-- 113 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv-~VlhgVDATkL~~~~~Lk-- 113 (421)
++++|+.|=+. ---+++|+.+ ..+.+|++++.+.. ......++|++.|. ...+..|.++......+-
T Consensus 33 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 33 GRTALVTGSSR-GIGAAIAEGLAGAGAHVILHGVKPG--------STAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSTT--------TTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCHH--------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 46788888543 2334444433 12568888887542 12233455665554 355678888876543221
Q ss_pred ---cCcccEEEEcC
Q 014642 114 ---KRKFDRIIFNF 124 (421)
Q Consensus 114 ---~~~FDrIIFNF 124 (421)
..+.|.+|.|=
T Consensus 104 ~~~~g~iD~lvnnA 117 (275)
T 4imr_A 104 AEAIAPVDILVINA 117 (275)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 15789988873
No 445
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=20.21 E-value=1.9e+02 Score=22.50 Aligned_cols=73 Identities=21% Similarity=0.290 Sum_probs=37.5
Q ss_pred CCeEEEEecCChhHHHHHH-HhhCCCCcEEeccccCHHHHHHhhhhHHHHHHHHHh-CCCEEEeecccCCcCcccccccC
Q 014642 38 KHQILLVGEGDFSFSFALS-QKFGSASNICASSLDSYETVVKKFKEARSNLDTLKK-LGASIIHGVDATEMKEHSELSKR 115 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa-~~~gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~-~Gv~VlhgVDATkL~~~~~Lk~~ 115 (421)
..+|+++|=|..-..++-. .. .+.++++...+ .+ .++.+++ .|+.++.+ |+++........-.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~-~~-----------~~~~~~~~~~~~~~~~-d~~~~~~l~~~~~~ 68 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDID-KD-----------ICKKASAEIDALVING-DCTKIKTLEDAGIE 68 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESC-HH-----------HHHHHHHHCSSEEEES-CTTSHHHHHHTTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECC-HH-----------HHHHHHHhcCcEEEEc-CCCCHHHHHHcCcc
Confidence 4689999998876554432 11 23566655432 11 2333443 47765543 55443211111124
Q ss_pred cccEEEEcCC
Q 014642 116 KFDRIIFNFP 125 (421)
Q Consensus 116 ~FDrIIFNFP 125 (421)
..|.||.--|
T Consensus 69 ~~d~vi~~~~ 78 (140)
T 1lss_A 69 DADMYIAVTG 78 (140)
T ss_dssp TCSEEEECCS
T ss_pred cCCEEEEeeC
Confidence 6899888754
No 446
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=20.10 E-value=1.6e+02 Score=26.59 Aligned_cols=79 Identities=14% Similarity=0.149 Sum_probs=46.8
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccC-----------HHHHHHhhhhHHHHHHHHHhCCCE-EEeecccC
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDS-----------YETVVKKFKEARSNLDTLKKLGAS-IIHGVDAT 104 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS-----------~eeL~~KY~~a~~Nl~~Lr~~Gv~-VlhgVDAT 104 (421)
++++|+.|=+.+ .-+++|+.+ ..+.+|+.+..+. .+.+ ...++.+++.|.. ..+.+|.+
T Consensus 10 ~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 10 GKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDL-------AETVALVEKTGRRCISAKVDVK 81 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHH-------HHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHH-------HHHHHHHHhcCCeEEEEeCCCC
Confidence 568999996653 344444443 1356788877652 2222 2345566666654 45678988
Q ss_pred CcCccccc------ccCcccEEEEcC
Q 014642 105 EMKEHSEL------SKRKFDRIIFNF 124 (421)
Q Consensus 105 kL~~~~~L------k~~~FDrIIFNF 124 (421)
+......+ ...+.|.+|.|=
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nA 107 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNA 107 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 87653222 124789888774
No 447
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.01 E-value=1.1e+02 Score=27.62 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=44.9
Q ss_pred CCeEEEEecCChhHHHHHHHhh-CCCCcEEeccccCHHHHHHhhhhHHHHHHHHHhCCC----EEEeecccCCcCccccc
Q 014642 38 KHQILLVGEGDFSFSFALSQKF-GSASNICASSLDSYETVVKKFKEARSNLDTLKKLGA----SIIHGVDATEMKEHSEL 112 (421)
Q Consensus 38 ~~rILLVGEGDFSFSlSLa~~~-gs~~nLvATSlDS~eeL~~KY~~a~~Nl~~Lr~~Gv----~VlhgVDATkL~~~~~L 112 (421)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .++..++|++.|. ...+.+|.++......+
T Consensus 6 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 76 (280)
T 1xkq_A 6 NKTVIITGSSNG-IGRTTAILFAQEGANVTITGRSS-ER-------LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76 (280)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHH
Confidence 467888886553 334444433 1256888887753 22 2233455666554 35567898886543222
Q ss_pred ------ccCcccEEEEcC
Q 014642 113 ------SKRKFDRIIFNF 124 (421)
Q Consensus 113 ------k~~~FDrIIFNF 124 (421)
...+.|.+|.|=
T Consensus 77 ~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 77 INSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 124789998884
Done!