Query 014644
Match_columns 421
No_of_seqs 450 out of 1811
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 15:16:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014644.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014644hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 4.4E-44 1.5E-48 348.8 40.4 372 30-421 56-565 (611)
2 3ow8_A WD repeat-containing pr 100.0 1.1E-43 3.6E-48 318.3 35.1 284 29-421 28-319 (321)
3 1vyh_C Platelet-activating fac 100.0 1.9E-43 6.5E-48 327.7 35.2 279 30-421 105-409 (410)
4 2ynn_A Coatomer subunit beta'; 100.0 3.3E-42 1.1E-46 306.5 35.1 279 31-421 11-300 (304)
5 3dw8_B Serine/threonine-protei 100.0 1.2E-41 4E-46 319.7 39.3 373 29-421 24-444 (447)
6 1got_B GT-beta; complex (GTP-b 100.0 1.2E-41 4.1E-46 307.8 34.3 281 30-420 52-340 (340)
7 1nr0_A Actin interacting prote 100.0 4.2E-41 1.4E-45 327.8 37.2 345 30-421 144-609 (611)
8 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.2E-41 3.1E-45 302.6 34.8 292 25-421 6-333 (345)
9 3iz6_a 40S ribosomal protein R 100.0 2.8E-41 9.7E-46 310.1 30.8 293 30-421 63-373 (380)
10 2ymu_A WD-40 repeat protein; u 100.0 4.4E-40 1.5E-44 319.1 40.2 314 30-420 259-577 (577)
11 3frx_A Guanine nucleotide-bind 100.0 2.5E-40 8.6E-45 296.4 34.9 282 30-421 14-315 (319)
12 4gqb_B Methylosome protein 50; 100.0 5.1E-41 1.7E-45 303.2 30.0 294 30-421 27-329 (344)
13 2pbi_B Guanine nucleotide-bind 100.0 3.3E-40 1.1E-44 299.9 35.2 284 30-420 61-354 (354)
14 4ery_A WD repeat-containing pr 100.0 1.3E-39 4.3E-44 291.1 37.2 281 30-421 20-310 (312)
15 4g56_B MGC81050 protein; prote 100.0 6.6E-41 2.3E-45 304.7 29.1 290 30-421 39-341 (357)
16 2xzm_R RACK1; ribosome, transl 100.0 1.5E-39 5.1E-44 294.5 37.0 287 30-420 18-337 (343)
17 1erj_A Transcriptional repress 100.0 4.1E-39 1.4E-43 297.0 36.1 299 26-420 57-386 (393)
18 2ymu_A WD-40 repeat protein; u 100.0 1.1E-38 3.8E-43 309.2 40.2 315 30-421 218-537 (577)
19 2hes_X YDR267CP; beta-propelle 100.0 3.3E-39 1.1E-43 290.5 32.5 284 31-421 12-326 (330)
20 2pm9_A Protein WEB1, protein t 100.0 7.7E-40 2.6E-44 304.3 24.7 338 29-421 8-412 (416)
21 1r5m_A SIR4-interacting protei 100.0 4.7E-38 1.6E-42 292.7 34.0 334 24-421 36-423 (425)
22 3vl1_A 26S proteasome regulato 100.0 9.7E-38 3.3E-42 290.6 32.4 329 34-421 57-417 (420)
23 4gqb_B Methylosome protein 50; 100.0 1.5E-37 5.3E-42 280.4 31.4 246 30-382 79-329 (344)
24 2ynn_A Coatomer subunit beta'; 100.0 1.4E-37 4.6E-42 276.7 29.9 247 128-421 4-257 (304)
25 1gxr_A ESG1, transducin-like e 100.0 1E-36 3.5E-41 274.8 34.8 326 26-420 2-334 (337)
26 3zwl_B Eukaryotic translation 100.0 2.8E-36 9.5E-41 275.4 37.9 294 24-420 23-343 (369)
27 4aow_A Guanine nucleotide-bind 100.0 1.6E-36 5.5E-41 274.0 35.5 283 30-421 35-335 (340)
28 3dm0_A Maltose-binding peripla 100.0 6.8E-37 2.3E-41 302.8 33.2 286 30-421 379-691 (694)
29 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-37 4.6E-42 294.7 26.8 333 30-421 130-515 (524)
30 3ow8_A WD repeat-containing pr 100.0 8E-37 2.7E-41 273.6 30.1 239 30-381 77-318 (321)
31 4e54_B DNA damage-binding prot 100.0 1.4E-36 4.9E-41 283.9 30.9 288 31-421 117-428 (435)
32 1vyh_C Platelet-activating fac 100.0 1.3E-36 4.5E-41 281.7 30.3 238 31-381 148-408 (410)
33 1k8k_C P40, ARP2/3 complex 41 100.0 3.3E-36 1.1E-40 275.5 32.5 284 32-420 7-358 (372)
34 3mkq_A Coatomer beta'-subunit; 100.0 9E-36 3.1E-40 300.4 38.7 325 30-421 10-384 (814)
35 2pm7_B Protein transport prote 100.0 1.3E-35 4.3E-40 263.1 33.5 249 30-420 6-282 (297)
36 3ei3_B DNA damage-binding prot 100.0 2.1E-35 7.2E-40 271.5 34.4 280 30-421 70-380 (383)
37 3k26_A Polycomb protein EED; W 100.0 1.2E-35 4E-40 271.0 31.6 289 30-421 15-364 (366)
38 3sfz_A APAF-1, apoptotic pepti 100.0 4.3E-35 1.5E-39 308.3 39.5 294 29-380 611-909 (1249)
39 1pgu_A Actin interacting prote 100.0 1.6E-34 5.5E-39 282.0 40.2 338 30-421 60-612 (615)
40 1sq9_A Antiviral protein SKI8; 100.0 9.8E-36 3.3E-40 274.9 29.9 293 30-421 13-393 (397)
41 2oaj_A Protein SNI1; WD40 repe 100.0 5.8E-35 2E-39 294.8 37.6 348 27-420 92-658 (902)
42 3dwl_C Actin-related protein 2 100.0 1.5E-36 5E-41 278.6 22.3 287 32-421 10-377 (377)
43 3i2n_A WD repeat-containing pr 100.0 1.7E-35 5.8E-40 269.1 29.0 284 30-420 15-350 (357)
44 3sfz_A APAF-1, apoptotic pepti 100.0 2.5E-35 8.6E-40 310.0 33.8 340 30-421 740-1205(1249)
45 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-35 1.6E-39 295.4 33.6 355 27-420 11-516 (902)
46 4g56_B MGC81050 protein; prote 100.0 4.6E-35 1.6E-39 266.2 29.9 247 28-381 89-340 (357)
47 1got_B GT-beta; complex (GTP-b 100.0 1.1E-34 3.8E-39 262.1 31.4 247 128-421 46-299 (340)
48 3bg1_A Protein SEC13 homolog; 100.0 2.9E-35 1E-39 263.1 26.1 246 30-380 10-289 (316)
49 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-34 1.3E-38 268.5 34.8 306 30-420 115-439 (445)
50 3odt_A Protein DOA1; ubiquitin 100.0 7E-34 2.4E-38 253.6 32.9 271 30-421 15-294 (313)
51 1gxr_A ESG1, transducin-like e 100.0 1E-33 3.5E-38 255.1 34.4 284 25-380 43-333 (337)
52 3gre_A Serine/threonine-protei 100.0 1.1E-34 3.7E-39 271.5 28.6 337 30-420 60-437 (437)
53 3v7d_B Cell division control p 100.0 8.3E-34 2.8E-38 267.6 33.3 289 30-421 118-419 (464)
54 2pm9_A Protein WEB1, protein t 100.0 5.7E-34 1.9E-38 264.7 31.7 301 26-382 60-412 (416)
55 3frx_A Guanine nucleotide-bind 100.0 5.9E-34 2E-38 254.9 29.9 242 128-420 8-264 (319)
56 2hes_X YDR267CP; beta-propelle 100.0 8.6E-35 2.9E-39 261.7 24.5 252 31-382 56-326 (330)
57 3f3f_A Nucleoporin SEH1; struc 100.0 8.5E-34 2.9E-38 256.6 31.1 296 30-420 8-334 (351)
58 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.3E-34 2.2E-38 257.6 29.5 267 30-337 58-337 (345)
59 3iz6_a 40S ribosomal protein R 100.0 1.9E-34 6.4E-39 264.7 26.3 259 117-421 49-327 (380)
60 2j04_A TAU60, YPL007P, hypothe 100.0 2.8E-34 9.7E-39 265.7 27.5 298 31-412 13-349 (588)
61 1erj_A Transcriptional repress 100.0 1.4E-33 4.7E-38 260.1 31.7 248 34-381 124-386 (393)
62 4h5i_A Guanine nucleotide-exch 100.0 1.3E-33 4.4E-38 257.3 28.5 311 33-399 14-358 (365)
63 2xzm_R RACK1; ribosome, transl 100.0 4E-33 1.4E-37 252.3 31.5 242 128-421 12-283 (343)
64 3bg1_A Protein SEC13 homolog; 100.0 7.3E-35 2.5E-39 260.5 19.3 249 131-420 6-290 (316)
65 4aez_A CDC20, WD repeat-contai 100.0 5.5E-33 1.9E-37 256.9 32.4 275 31-421 89-378 (401)
66 4ery_A WD repeat-containing pr 100.0 6.3E-33 2.2E-37 247.6 31.7 243 31-382 63-310 (312)
67 2pbi_B Guanine nucleotide-bind 100.0 5.1E-33 1.8E-37 252.4 31.3 249 128-421 55-313 (354)
68 1yfq_A Cell cycle arrest prote 100.0 3.8E-33 1.3E-37 252.2 28.8 270 31-415 9-314 (342)
69 4a11_B DNA excision repair pro 100.0 1.7E-32 5.8E-37 253.9 32.5 337 30-420 40-402 (408)
70 1pgu_A Actin interacting prote 100.0 1.5E-32 5.1E-37 268.1 32.4 315 30-420 15-363 (615)
71 3jrp_A Fusion protein of prote 100.0 8.2E-33 2.8E-37 253.4 28.6 256 30-336 8-288 (379)
72 4gga_A P55CDC, cell division c 100.0 9.4E-32 3.2E-36 250.2 34.2 278 36-382 108-393 (420)
73 1r5m_A SIR4-interacting protei 100.0 1.6E-32 5.6E-37 255.3 29.2 279 31-382 106-423 (425)
74 3mmy_A MRNA export factor; mRN 100.0 4E-32 1.4E-36 247.7 30.4 273 30-414 36-336 (368)
75 4ggc_A P55CDC, cell division c 100.0 4.5E-31 1.5E-35 236.0 36.1 277 36-420 28-312 (318)
76 2aq5_A Coronin-1A; WD40 repeat 100.0 7.9E-33 2.7E-37 256.0 24.7 241 135-420 78-339 (402)
77 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-32 2.5E-36 252.2 31.4 267 31-421 131-412 (435)
78 4gq1_A NUP37; propeller, trans 100.0 4.4E-32 1.5E-36 249.9 25.4 260 135-420 86-386 (393)
79 2xyi_A Probable histone-bindin 100.0 1.7E-31 5.8E-36 249.1 29.1 284 21-420 116-407 (430)
80 3dwl_C Actin-related protein 2 100.0 7.9E-33 2.7E-37 253.7 19.6 240 135-420 8-278 (377)
81 3vl1_A 26S proteasome regulato 100.0 1.1E-30 3.6E-35 243.0 34.3 286 35-381 98-416 (420)
82 3v7d_B Cell division control p 100.0 1.3E-30 4.4E-35 245.8 34.3 274 31-417 160-456 (464)
83 3dm0_A Maltose-binding peripla 100.0 5E-31 1.7E-35 260.9 32.3 259 30-334 427-692 (694)
84 4aez_A CDC20, WD repeat-contai 100.0 1.3E-30 4.3E-35 241.1 32.0 251 30-344 131-389 (401)
85 3jrp_A Fusion protein of prote 100.0 2.4E-31 8.1E-36 243.7 26.8 250 128-420 2-284 (379)
86 4h5i_A Guanine nucleotide-exch 100.0 9.2E-32 3.1E-36 245.1 23.8 255 31-336 71-344 (365)
87 3mkq_A Coatomer beta'-subunit; 100.0 5.9E-31 2E-35 265.3 31.4 275 91-420 14-299 (814)
88 3k26_A Polycomb protein EED; W 100.0 7.1E-31 2.4E-35 239.3 28.2 260 31-381 67-363 (366)
89 3jro_A Fusion protein of prote 100.0 8.3E-32 2.9E-36 268.0 23.7 254 30-336 6-286 (753)
90 4aow_A Guanine nucleotide-bind 100.0 5.3E-30 1.8E-34 231.3 33.3 253 30-336 83-338 (340)
91 4gga_A P55CDC, cell division c 100.0 3.3E-30 1.1E-34 239.7 31.5 255 113-421 124-393 (420)
92 3i2n_A WD repeat-containing pr 100.0 7.5E-31 2.6E-35 238.4 25.8 251 24-382 56-351 (357)
93 2j04_B YDR362CP, TAU91; beta p 100.0 6.9E-31 2.3E-35 248.7 26.2 291 77-410 132-460 (524)
94 1k8k_C P40, ARP2/3 complex 41 100.0 9.6E-31 3.3E-35 239.2 25.8 239 135-420 5-271 (372)
95 3lrv_A PRE-mRNA-splicing facto 100.0 8.8E-31 3E-35 236.9 25.1 234 45-336 46-293 (343)
96 4e54_B DNA damage-binding prot 100.0 1.8E-30 6E-35 242.7 27.1 253 28-382 159-428 (435)
97 4a11_B DNA excision repair pro 100.0 2.5E-30 8.7E-35 239.2 27.7 261 115-421 24-363 (408)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-29 4.5E-34 237.8 32.3 233 135-412 99-373 (450)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 5.6E-30 1.9E-34 236.8 28.4 247 30-380 78-338 (402)
100 1sq9_A Antiviral protein SKI8; 100.0 3.9E-30 1.3E-34 237.4 26.4 258 30-336 59-396 (397)
101 3zwl_B Eukaryotic translation 100.0 3.2E-29 1.1E-33 228.5 31.8 247 31-336 72-347 (369)
102 4gq1_A NUP37; propeller, trans 100.0 8.9E-31 3.1E-35 241.2 20.3 260 45-380 99-385 (393)
103 3ei3_B DNA damage-binding prot 100.0 9.7E-30 3.3E-34 233.7 26.3 244 128-421 64-337 (383)
104 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-28 4.1E-33 223.8 33.0 249 30-336 16-272 (355)
105 2pm7_B Protein transport prote 100.0 8.3E-30 2.9E-34 225.6 24.3 213 30-336 50-286 (297)
106 3gre_A Serine/threonine-protei 100.0 9.3E-30 3.2E-34 238.0 25.3 278 27-332 105-437 (437)
107 3dw8_B Serine/threonine-protei 100.0 8.6E-29 3E-33 232.0 31.1 300 7-333 67-444 (447)
108 3jro_A Fusion protein of prote 100.0 1.4E-29 4.8E-34 252.0 24.5 245 135-421 6-283 (753)
109 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.3E-28 2.1E-32 226.2 33.1 264 31-377 157-430 (445)
110 4ggc_A P55CDC, cell division c 100.0 2.8E-28 9.6E-33 217.8 28.1 247 30-336 64-316 (318)
111 3bws_A Protein LP49; two-domai 100.0 4.1E-28 1.4E-32 226.5 29.7 284 26-420 115-429 (433)
112 3odt_A Protein DOA1; ubiquitin 100.0 6.3E-28 2.2E-32 214.9 29.3 238 128-421 9-253 (313)
113 2w18_A PALB2, fancn, partner a 100.0 5.9E-28 2E-32 210.3 28.0 283 35-381 41-354 (356)
114 1yfq_A Cell cycle arrest prote 100.0 1.8E-28 6.2E-33 221.5 23.4 239 135-421 8-280 (342)
115 2j04_A TAU60, YPL007P, hypothe 100.0 2E-28 6.8E-33 226.8 22.9 258 92-420 17-294 (588)
116 1p22_A F-BOX/WD-repeat protein 100.0 9.7E-28 3.3E-32 224.2 27.2 231 31-382 171-412 (435)
117 1l0q_A Surface layer protein; 100.0 2.1E-26 7.1E-31 212.0 31.9 228 140-421 33-273 (391)
118 2w18_A PALB2, fancn, partner a 100.0 4.1E-27 1.4E-31 205.0 24.9 245 9-333 74-355 (356)
119 3lrv_A PRE-mRNA-splicing facto 100.0 3.1E-27 1.1E-31 213.6 24.9 257 100-419 46-329 (343)
120 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-26 3.8E-31 217.9 29.3 241 31-358 100-365 (450)
121 3mmy_A MRNA export factor; mRN 100.0 7.8E-27 2.7E-31 212.6 26.6 245 128-421 30-302 (368)
122 1l0q_A Surface layer protein; 100.0 4.2E-25 1.4E-29 203.3 34.4 314 27-412 25-366 (391)
123 3f3f_A Nucleoporin SEH1; struc 100.0 6E-26 2.1E-30 204.9 26.6 223 31-337 55-339 (351)
124 2xyi_A Probable histone-bindin 100.0 3.6E-26 1.2E-30 213.1 25.7 213 30-336 178-411 (430)
125 3vu4_A KMHSV2; beta-propeller 99.9 7.3E-26 2.5E-30 205.4 24.3 235 128-421 10-269 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.9E-25 6.6E-30 206.8 26.4 312 33-406 62-410 (415)
127 2ecf_A Dipeptidyl peptidase IV 99.9 7.9E-25 2.7E-29 218.3 32.6 335 33-420 36-456 (741)
128 1nir_A Nitrite reductase; hemo 99.9 1.4E-23 4.9E-28 200.2 34.0 319 44-421 146-512 (543)
129 3bws_A Protein LP49; two-domai 99.9 1.5E-23 5.1E-28 195.6 28.2 237 139-421 123-388 (433)
130 1xfd_A DIP, dipeptidyl aminope 99.9 1.8E-23 6.2E-28 207.9 27.5 333 33-412 16-428 (723)
131 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-23 6.6E-28 207.1 26.0 333 35-421 27-433 (706)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-21 3.5E-26 181.7 30.6 245 47-358 143-408 (415)
133 2ojh_A Uncharacterized protein 99.9 4E-23 1.4E-27 182.0 19.7 229 136-413 39-291 (297)
134 1k32_A Tricorn protease; prote 99.9 1.2E-21 4.1E-26 202.1 29.1 319 35-421 246-635 (1045)
135 1k32_A Tricorn protease; prote 99.9 2.6E-21 8.9E-26 199.6 31.6 344 30-419 49-498 (1045)
136 3u4y_A Uncharacterized protein 99.9 1.1E-20 3.9E-25 169.5 30.2 231 46-336 9-253 (331)
137 1ri6_A Putative isomerase YBHE 99.9 4.5E-21 1.5E-25 172.8 25.2 243 136-420 35-305 (343)
138 3vgz_A Uncharacterized protein 99.9 5.1E-20 1.7E-24 166.7 32.3 247 29-336 36-304 (353)
139 1nir_A Nitrite reductase; hemo 99.9 3E-20 1E-24 177.3 31.1 274 98-421 145-456 (543)
140 3o4h_A Acylamino-acid-releasin 99.9 3E-21 1E-25 187.0 23.6 265 33-420 21-312 (582)
141 1ri6_A Putative isomerase YBHE 99.9 7.4E-20 2.5E-24 164.8 31.1 264 24-334 28-307 (343)
142 2ojh_A Uncharacterized protein 99.9 1.1E-20 3.6E-25 166.4 25.0 236 29-375 37-292 (297)
143 1pby_B Quinohemoprotein amine 99.9 6.6E-21 2.2E-25 171.3 24.0 233 140-421 35-308 (337)
144 2ecf_A Dipeptidyl peptidase IV 99.9 8.9E-21 3E-25 189.1 26.7 288 91-420 37-410 (741)
145 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-20 7.1E-25 185.9 27.2 287 93-420 19-390 (723)
146 1z68_A Fibroblast activation p 99.9 1.1E-19 3.6E-24 180.6 27.6 326 38-420 20-440 (719)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 6E-20 2.1E-24 170.5 22.8 224 33-336 36-279 (434)
148 3u4y_A Uncharacterized protein 99.8 2.2E-18 7.5E-23 154.5 29.5 253 33-336 40-305 (331)
149 3hfq_A Uncharacterized protein 99.8 4.7E-18 1.6E-22 153.5 31.6 242 55-335 14-271 (347)
150 2z3z_A Dipeptidyl aminopeptida 99.8 5.7E-19 2E-23 175.0 27.5 263 34-358 82-411 (706)
151 3hfq_A Uncharacterized protein 99.8 1.2E-18 4.2E-23 157.3 26.9 268 23-335 29-317 (347)
152 4a5s_A Dipeptidyl peptidase 4 99.8 1.8E-18 6.3E-23 172.0 29.0 327 33-413 16-435 (740)
153 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-19 4.3E-24 168.3 17.7 172 138-334 36-222 (434)
154 3scy_A Hypothetical bacterial 99.8 4.7E-17 1.6E-21 147.8 32.8 220 25-334 42-290 (361)
155 1jmx_B Amine dehydrogenase; ox 99.8 6.4E-18 2.2E-22 152.5 25.7 288 44-421 8-323 (349)
156 1pby_B Quinohemoprotein amine 99.8 1.5E-17 5.2E-22 149.2 25.0 251 35-346 35-320 (337)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.1E-17 2.8E-21 146.4 28.9 260 34-336 40-342 (365)
158 3pe7_A Oligogalacturonate lyas 99.8 1.6E-17 5.6E-22 152.3 24.5 269 39-419 41-378 (388)
159 3vgz_A Uncharacterized protein 99.8 9.8E-17 3.4E-21 145.0 27.6 249 27-326 82-335 (353)
160 1z68_A Fibroblast activation p 99.8 5E-18 1.7E-22 168.6 20.0 261 113-420 35-388 (719)
161 3o4h_A Acylamino-acid-releasin 99.8 4.1E-18 1.4E-22 165.0 17.5 227 137-420 20-273 (582)
162 3azo_A Aminopeptidase; POP fam 99.8 1.6E-16 5.5E-21 156.3 26.2 228 147-420 87-366 (662)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.8E-15 6E-20 137.6 28.6 270 49-357 4-316 (365)
164 1jmx_B Amine dehydrogenase; ox 99.7 3.5E-16 1.2E-20 141.0 21.7 220 35-344 44-333 (349)
165 1q7f_A NHL, brain tumor CG1071 99.7 3E-14 1E-18 124.7 31.9 246 31-420 27-277 (286)
166 4a5s_A Dipeptidyl peptidase 4 99.7 3E-15 1E-19 148.9 26.4 274 95-412 21-381 (740)
167 3scy_A Hypothetical bacterial 99.7 1.6E-14 5.4E-19 131.0 28.9 175 137-336 48-243 (361)
168 3fvz_A Peptidyl-glycine alpha- 99.7 4.8E-14 1.6E-18 126.1 29.8 283 33-420 23-319 (329)
169 3c5m_A Oligogalacturonate lyas 99.7 4.2E-16 1.4E-20 143.1 15.9 217 143-412 85-369 (396)
170 3azo_A Aminopeptidase; POP fam 99.7 3.6E-15 1.2E-19 146.6 21.6 206 137-380 128-363 (662)
171 3pe7_A Oligogalacturonate lyas 99.7 2.5E-15 8.7E-20 137.6 19.3 241 128-421 21-327 (388)
172 2xdw_A Prolyl endopeptidase; a 99.7 3.6E-14 1.2E-18 140.5 28.5 240 135-420 121-411 (710)
173 2dg1_A DRP35, lactonase; beta 99.7 3.3E-14 1.1E-18 127.4 24.8 230 135-413 41-299 (333)
174 3e5z_A Putative gluconolactona 99.6 1.5E-13 5.2E-18 120.9 26.0 236 135-420 24-283 (296)
175 2bkl_A Prolyl endopeptidase; m 99.6 4.1E-14 1.4E-18 139.7 24.6 238 135-420 117-394 (695)
176 2oiz_A Aromatic amine dehydrog 99.6 4.6E-13 1.6E-17 121.2 28.6 304 45-406 13-360 (361)
177 2z2n_A Virginiamycin B lyase; 99.6 1.1E-11 3.7E-16 108.9 33.2 274 33-420 14-292 (299)
178 2gop_A Trilobed protease; beta 99.6 4.7E-13 1.6E-17 120.5 24.7 207 140-412 60-318 (347)
179 2dg1_A DRP35, lactonase; beta 99.6 4.2E-12 1.4E-16 113.6 30.3 229 32-358 43-290 (333)
180 3c5m_A Oligogalacturonate lyas 99.6 6.1E-13 2.1E-17 121.9 23.7 250 38-336 85-385 (396)
181 1q7f_A NHL, brain tumor CG1071 99.6 3.9E-12 1.3E-16 111.2 27.2 160 137-336 119-281 (286)
182 3e5z_A Putative gluconolactona 99.6 2.7E-12 9.2E-17 112.9 25.7 230 32-377 26-279 (296)
183 2oiz_A Aromatic amine dehydrog 99.6 1.8E-12 6.2E-17 117.2 25.0 255 114-421 31-332 (361)
184 1yr2_A Prolyl oligopeptidase; 99.5 9E-13 3.1E-17 131.0 23.8 237 135-420 159-438 (741)
185 2xdw_A Prolyl endopeptidase; a 99.5 5.2E-12 1.8E-16 125.0 27.8 261 32-337 123-416 (710)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2E-11 7E-16 108.1 28.3 203 35-336 19-257 (314)
187 1qks_A Cytochrome CD1 nitrite 99.5 1.2E-10 4E-15 111.0 34.3 317 45-421 165-536 (567)
188 1rwi_B Serine/threonine-protei 99.5 2.3E-11 7.9E-16 105.2 24.9 230 140-420 25-261 (270)
189 3dsm_A Uncharacterized protein 99.5 2.4E-11 8.1E-16 108.4 25.2 232 140-421 45-300 (328)
190 3fvz_A Peptidyl-glycine alpha- 99.5 7.7E-12 2.6E-16 111.7 21.8 217 33-335 90-322 (329)
191 3no2_A Uncharacterized protein 99.5 9.8E-11 3.4E-15 101.5 27.3 226 45-323 3-231 (276)
192 1rwi_B Serine/threonine-protei 99.5 4.6E-11 1.6E-15 103.3 25.1 238 35-336 25-265 (270)
193 2qc5_A Streptogramin B lactona 99.5 5.6E-10 1.9E-14 97.9 32.4 274 33-420 19-297 (300)
194 2bkl_A Prolyl endopeptidase; m 99.4 7.4E-12 2.5E-16 123.6 21.8 225 31-358 118-373 (695)
195 2gop_A Trilobed protease; beta 99.4 6.3E-11 2.2E-15 106.5 24.2 246 34-348 59-341 (347)
196 3dsm_A Uncharacterized protein 99.4 2E-10 6.7E-15 102.5 26.5 179 139-358 84-277 (328)
197 3dr2_A Exported gluconolactona 99.4 2.6E-10 8.8E-15 100.6 25.5 234 136-420 42-303 (305)
198 1yr2_A Prolyl oligopeptidase; 99.4 8.3E-11 2.8E-15 116.9 23.4 256 32-336 161-442 (741)
199 3no2_A Uncharacterized protein 99.4 8.9E-10 3.1E-14 95.4 26.8 186 113-343 14-202 (276)
200 2z2n_A Virginiamycin B lyase; 99.3 3.3E-09 1.1E-13 92.9 29.5 236 135-420 11-252 (299)
201 1qks_A Cytochrome CD1 nitrite 99.3 3.7E-09 1.3E-13 100.7 30.5 263 113-420 176-474 (567)
202 3g4e_A Regucalcin; six bladed 99.3 3.1E-09 1E-13 93.3 25.5 230 36-324 15-261 (297)
203 1xip_A Nucleoporin NUP159; bet 99.3 1.6E-10 5.5E-15 103.8 16.2 189 35-321 39-230 (388)
204 2ghs_A AGR_C_1268P; regucalcin 99.3 7.8E-09 2.7E-13 92.0 27.0 158 139-334 90-259 (326)
205 3iuj_A Prolyl endopeptidase; h 99.3 9.1E-10 3.1E-14 108.5 22.9 237 135-420 125-402 (693)
206 3g4e_A Regucalcin; six bladed 99.2 4.7E-09 1.6E-13 92.1 24.9 228 136-412 10-260 (297)
207 3sjl_D Methylamine dehydrogena 99.2 1.2E-08 4.1E-13 91.4 27.6 238 144-421 83-361 (386)
208 2qe8_A Uncharacterized protein 99.2 9.6E-09 3.3E-13 92.1 26.6 180 136-336 64-279 (343)
209 3hrp_A Uncharacterized protein 99.2 2.3E-08 7.8E-13 91.8 29.5 270 35-333 132-408 (409)
210 1xip_A Nucleoporin NUP159; bet 99.2 2.2E-10 7.6E-15 102.9 15.5 150 140-336 39-192 (388)
211 2mad_H Methylamine dehydrogena 99.2 6.2E-08 2.1E-12 87.6 30.7 236 143-421 70-348 (373)
212 3iuj_A Prolyl endopeptidase; h 99.2 4E-09 1.4E-13 103.9 24.7 255 31-336 126-406 (693)
213 2qc5_A Streptogramin B lactona 99.2 3.5E-08 1.2E-12 86.3 28.3 235 136-420 17-257 (300)
214 3hrp_A Uncharacterized protein 99.2 8.5E-09 2.9E-13 94.6 25.0 236 139-419 131-406 (409)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.1E-08 7E-13 88.5 23.6 159 139-336 117-300 (314)
216 2mad_H Methylamine dehydrogena 99.1 2.3E-07 7.9E-12 83.9 30.2 254 38-336 70-351 (373)
217 3c75_H MADH, methylamine dehyd 99.1 1.3E-07 4.5E-12 86.2 26.4 258 42-343 79-409 (426)
218 3dr2_A Exported gluconolactona 99.1 8.5E-08 2.9E-12 84.4 23.8 231 34-329 45-301 (305)
219 3sjl_D Methylamine dehydrogena 99.0 6.7E-07 2.3E-11 80.1 28.4 261 38-344 82-371 (386)
220 2ghs_A AGR_C_1268P; regucalcin 99.0 2.8E-07 9.5E-12 81.9 23.9 219 45-324 59-291 (326)
221 2hz6_A Endoplasmic reticulum t 98.9 1.2E-09 4.3E-14 98.8 6.2 181 45-337 7-194 (369)
222 3c75_H MADH, methylamine dehyd 98.9 9E-07 3.1E-11 80.7 25.0 256 114-421 99-400 (426)
223 2qe8_A Uncharacterized protein 98.9 6.2E-07 2.1E-11 80.3 22.3 215 32-329 65-315 (343)
224 1fwx_A Nitrous oxide reductase 98.8 1.8E-06 6.1E-11 80.8 23.7 291 50-380 18-414 (595)
225 2ece_A 462AA long hypothetical 98.8 4.9E-06 1.7E-10 75.2 25.1 195 115-323 165-399 (462)
226 1mda_H Methylamine dehydrogena 98.8 8.4E-07 2.9E-11 79.5 19.7 77 253-347 269-357 (368)
227 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2E-05 6.9E-10 71.3 28.6 316 47-420 53-375 (376)
228 2iwa_A Glutamine cyclotransfer 98.7 9.9E-06 3.4E-10 68.6 23.2 169 128-336 10-182 (266)
229 1yiq_A Quinohemoprotein alcoho 98.7 3E-05 1E-09 76.0 30.0 196 143-358 239-528 (689)
230 2ece_A 462AA long hypothetical 98.7 6.3E-06 2.2E-10 74.5 22.8 158 145-335 88-289 (462)
231 1yiq_A Quinohemoprotein alcoho 98.7 2.5E-05 8.5E-10 76.5 29.0 332 47-410 70-534 (689)
232 2iwa_A Glutamine cyclotransfer 98.7 1.4E-05 4.9E-10 67.6 23.3 158 151-336 77-238 (266)
233 1npe_A Nidogen, entactin; glyc 98.7 6.3E-05 2.1E-09 64.4 27.6 174 139-358 79-261 (267)
234 1kb0_A Quinohemoprotein alcoho 98.6 2.3E-05 7.8E-10 76.7 26.4 196 143-358 247-530 (677)
235 2hz6_A Endoplasmic reticulum t 98.6 3.9E-08 1.3E-12 88.9 5.1 142 149-338 8-152 (369)
236 3nol_A Glutamine cyclotransfer 98.6 3.3E-05 1.1E-09 64.7 22.2 166 128-336 32-202 (262)
237 1npe_A Nidogen, entactin; glyc 98.6 9.8E-05 3.4E-09 63.2 25.9 157 139-336 36-199 (267)
238 4a2l_A BT_4663, two-component 98.5 0.00094 3.2E-08 66.8 35.8 247 138-420 262-523 (795)
239 3hxj_A Pyrrolo-quinoline quino 98.5 6E-06 2E-10 73.1 17.6 21 47-68 30-50 (330)
240 1kb0_A Quinohemoprotein alcoho 98.5 7.5E-05 2.6E-09 73.0 26.8 199 191-410 246-536 (677)
241 1mda_H Methylamine dehydrogena 98.4 1.2E-05 4.2E-10 71.9 17.7 79 193-291 269-359 (368)
242 3nol_A Glutamine cyclotransfer 98.4 3.7E-05 1.3E-09 64.4 19.3 206 24-324 31-244 (262)
243 1fwx_A Nitrous oxide reductase 98.4 2.2E-05 7.7E-10 73.5 19.7 147 148-336 99-309 (595)
244 2xe4_A Oligopeptidase B; hydro 98.4 4.6E-05 1.6E-09 75.6 21.7 118 136-277 170-304 (751)
245 3nok_A Glutaminyl cyclase; bet 98.4 7.4E-05 2.5E-09 62.6 19.0 166 128-336 44-211 (268)
246 2p4o_A Hypothetical protein; p 98.3 0.0013 4.3E-08 57.5 29.6 162 140-334 73-241 (306)
247 3hxj_A Pyrrolo-quinoline quino 98.3 0.00011 3.9E-09 64.8 21.3 211 150-419 107-320 (330)
248 2fp8_A Strictosidine synthase; 98.3 0.00039 1.4E-08 61.2 24.4 163 139-335 19-216 (322)
249 3mbr_X Glutamine cyclotransfer 98.3 0.00054 1.8E-08 56.8 23.2 167 128-336 10-180 (243)
250 3qqz_A Putative uncharacterize 98.3 0.00063 2.1E-08 57.2 24.0 175 135-334 23-203 (255)
251 2fp8_A Strictosidine synthase; 98.3 0.00047 1.6E-08 60.7 24.7 255 36-336 21-314 (322)
252 3mbr_X Glutamine cyclotransfer 98.3 0.00056 1.9E-08 56.7 22.4 143 151-323 76-222 (243)
253 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00059 2E-08 61.5 24.5 152 150-344 188-345 (376)
254 3nok_A Glutaminyl cyclase; bet 98.2 0.00027 9.3E-09 59.2 19.1 203 26-322 45-253 (268)
255 3qqz_A Putative uncharacterize 98.2 0.0019 6.6E-08 54.2 26.3 176 140-333 71-251 (255)
256 4a2l_A BT_4663, two-component 98.1 0.0088 3E-07 59.8 33.7 245 138-420 309-568 (795)
257 3v65_B Low-density lipoprotein 98.1 0.0045 1.5E-07 56.0 29.1 162 139-344 159-326 (386)
258 1kv9_A Type II quinohemoprotei 98.1 0.003 1E-07 61.6 27.3 84 192-285 234-340 (668)
259 2xe4_A Oligopeptidase B; hydro 98.1 0.00037 1.3E-08 69.1 20.9 113 189-336 175-305 (751)
260 1kv9_A Type II quinohemoprotei 98.0 0.004 1.4E-07 60.7 26.8 183 143-345 234-497 (668)
261 1k3i_A Galactose oxidase precu 97.9 0.007 2.4E-07 59.0 26.0 73 141-221 245-325 (656)
262 3v9f_A Two-component system se 97.8 0.03 1E-06 55.8 30.3 248 138-420 257-521 (781)
263 3v64_C Agrin; beta propeller, 97.8 0.015 5.1E-07 51.7 31.6 157 139-338 116-278 (349)
264 3amr_A 3-phytase; beta-propell 97.8 0.0093 3.2E-07 52.2 22.2 150 158-334 98-262 (355)
265 2ad6_A Methanol dehydrogenase 97.8 0.027 9.1E-07 53.8 27.6 59 268-344 444-502 (571)
266 2ism_A Putative oxidoreductase 97.7 0.024 8.3E-07 50.4 24.6 114 139-265 31-152 (352)
267 4hw6_A Hypothetical protein, I 97.7 0.031 1.1E-06 51.2 25.0 155 139-335 139-304 (433)
268 2p4o_A Hypothetical protein; p 97.7 0.014 4.9E-07 50.7 21.8 151 142-326 120-279 (306)
269 3tc9_A Hypothetical hydrolase; 97.7 0.025 8.5E-07 51.9 24.2 72 140-219 227-301 (430)
270 3sov_A LRP-6, low-density lipo 97.7 0.026 8.7E-07 49.4 28.4 156 140-338 80-241 (318)
271 2ad6_A Methanol dehydrogenase 97.6 0.049 1.7E-06 51.9 28.6 85 192-286 239-343 (571)
272 3tc9_A Hypothetical hydrolase; 97.6 0.0036 1.2E-07 57.5 17.2 154 140-335 138-301 (430)
273 3v9f_A Two-component system se 97.6 0.08 2.7E-06 52.7 33.4 239 138-420 312-565 (781)
274 2p9w_A MAL S 1 allergenic prot 97.5 0.012 4.2E-07 51.0 18.3 175 140-335 14-215 (334)
275 3p5b_L Low density lipoprotein 97.5 0.057 1.9E-06 48.9 30.0 161 137-339 157-324 (400)
276 3v65_B Low-density lipoprotein 97.5 0.059 2E-06 48.6 25.9 172 142-358 80-256 (386)
277 3v64_C Agrin; beta propeller, 97.4 0.058 2E-06 47.9 25.7 174 140-358 35-213 (349)
278 4hw6_A Hypothetical protein, I 97.4 0.075 2.6E-06 48.7 27.1 182 140-334 229-432 (433)
279 3m0c_C LDL receptor, low-densi 97.3 0.15 5.2E-06 50.4 31.4 163 137-342 469-639 (791)
280 1w6s_A Methanol dehydrogenase 97.3 0.12 4.2E-06 49.3 27.0 55 268-339 453-507 (599)
281 3sre_A PON1, serum paraoxonase 97.3 0.05 1.7E-06 48.1 20.0 166 140-336 51-253 (355)
282 1k3i_A Galactose oxidase precu 97.3 0.019 6.4E-07 56.0 18.8 113 143-277 190-323 (656)
283 1flg_A Protein (quinoprotein e 97.3 0.15 5E-06 48.8 29.4 59 268-344 466-524 (582)
284 1ijq_A LDL receptor, low-densi 97.2 0.098 3.4E-06 45.6 31.4 158 139-338 77-241 (316)
285 3das_A Putative oxidoreductase 97.2 0.11 3.6E-06 45.8 26.3 116 138-265 31-157 (347)
286 3kya_A Putative phosphatase; s 97.2 0.15 5.3E-06 47.1 25.1 160 140-334 140-340 (496)
287 3m0c_C LDL receptor, low-densi 97.1 0.19 6.5E-06 49.7 24.5 168 152-358 397-568 (791)
288 1n7d_A LDL receptor, low-densi 97.1 0.01 3.4E-07 58.2 15.4 155 140-336 454-615 (699)
289 3sov_A LRP-6, low-density lipo 97.1 0.12 4.1E-06 45.1 23.0 166 152-358 6-176 (318)
290 3pbp_A Nucleoporin NUP82; beta 97.1 0.1 3.4E-06 46.9 19.9 164 146-331 28-208 (452)
291 2xbg_A YCF48-like protein; pho 97.1 0.13 4.3E-06 45.2 29.6 229 139-419 80-318 (327)
292 3kya_A Putative phosphatase; s 97.1 0.029 1E-06 51.9 16.8 116 189-334 140-277 (496)
293 1ijq_A LDL receptor, low-densi 97.0 0.17 5.7E-06 44.1 26.1 167 152-358 3-174 (316)
294 2p9w_A MAL S 1 allergenic prot 96.9 0.079 2.7E-06 46.0 17.2 122 141-277 65-215 (334)
295 3amr_A 3-phytase; beta-propell 96.9 0.19 6.6E-06 44.0 22.5 147 150-334 40-209 (355)
296 3a9g_A Putative uncharacterize 96.9 0.076 2.6E-06 47.2 17.4 113 139-265 29-152 (354)
297 3pbp_A Nucleoporin NUP82; beta 96.8 0.25 8.5E-06 44.4 21.1 117 196-336 29-159 (452)
298 3p5b_L Low density lipoprotein 96.8 0.28 9.7E-06 44.3 28.9 159 138-336 111-278 (400)
299 4a0p_A LRP6, LRP-6, low-densit 96.8 0.42 1.4E-05 46.0 30.8 154 139-337 80-239 (628)
300 1flg_A Protein (quinoprotein e 96.8 0.41 1.4E-05 45.6 30.2 30 257-287 331-364 (582)
301 3s94_A LRP-6, low-density lipo 96.7 0.45 1.5E-05 45.7 25.3 154 139-337 84-245 (619)
302 1n7d_A LDL receptor, low-densi 96.6 0.028 9.7E-07 55.0 13.9 157 139-335 406-571 (699)
303 1cru_A Protein (soluble quinop 96.5 0.22 7.5E-06 45.8 18.3 118 139-266 27-162 (454)
304 2xzh_A Clathrin heavy chain 1; 96.5 0.37 1.3E-05 41.6 24.8 239 44-336 75-333 (365)
305 2xbg_A YCF48-like protein; pho 96.5 0.4 1.4E-05 41.9 28.1 160 136-333 160-320 (327)
306 1w6s_A Methanol dehydrogenase 96.4 0.74 2.5E-05 44.0 30.8 85 192-286 245-350 (599)
307 3ei3_A DNA damage-binding prot 96.3 1.3 4.4E-05 46.0 32.8 40 29-68 549-593 (1158)
308 2g8s_A Glucose/sorbosone dehyd 96.3 0.2 7E-06 44.4 16.3 117 140-265 19-147 (353)
309 3sre_A PON1, serum paraoxonase 95.9 0.86 2.9E-05 40.2 25.0 137 113-276 138-297 (355)
310 4a0p_A LRP6, LRP-6, low-densit 95.8 1.4 4.9E-05 42.3 28.5 156 139-336 37-198 (628)
311 1tl2_A L10, protein (tachylect 95.7 0.65 2.2E-05 37.6 16.8 113 188-329 41-157 (236)
312 3s25_A Hypothetical 7-bladed b 95.7 0.6 2.1E-05 40.2 16.0 133 147-336 22-177 (302)
313 1tl2_A L10, protein (tachylect 95.6 0.71 2.4E-05 37.4 15.0 111 140-271 42-157 (236)
314 1bpo_A Protein (clathrin); cla 95.5 1.4 4.8E-05 39.7 27.2 239 44-336 74-332 (494)
315 2ism_A Putative oxidoreductase 95.3 1.4 4.9E-05 38.8 24.0 26 35-63 32-57 (352)
316 2xzh_A Clathrin heavy chain 1; 94.8 1.9 6.4E-05 37.4 22.3 147 159-350 49-202 (365)
317 3a9g_A Putative uncharacterize 94.7 2.1 7.1E-05 37.8 24.4 30 35-68 30-59 (354)
318 2g8s_A Glucose/sorbosone dehyd 93.9 3.2 0.00011 36.6 25.1 28 35-64 19-46 (353)
319 3s94_A LRP-6, low-density lipo 93.8 4.9 0.00017 38.5 35.0 104 308-419 395-506 (619)
320 2wg3_C Hedgehog-interacting pr 93.3 4.9 0.00017 36.9 19.0 60 139-198 14-79 (463)
321 1xi4_A Clathrin heavy chain; a 93.3 3.8 0.00013 43.0 17.0 205 44-287 74-298 (1630)
322 3s25_A Hypothetical 7-bladed b 93.0 1 3.5E-05 38.7 11.1 137 145-335 110-255 (302)
323 1bpo_A Protein (clathrin); cla 92.2 6.5 0.00022 35.6 24.3 148 158-350 47-201 (494)
324 1xi4_A Clathrin heavy chain; a 90.3 11 0.00039 39.6 16.5 127 192-352 70-203 (1630)
325 2vpj_A Kelch-like protein 12; 88.6 10 0.00035 32.1 19.1 22 315-336 253-279 (301)
326 2be1_A Serine/threonine-protei 88.1 7.5 0.00026 33.9 12.0 23 201-223 112-134 (339)
327 3ei3_A DNA damage-binding prot 86.9 32 0.0011 35.8 29.8 246 37-336 330-592 (1158)
328 3sbq_A Nitrous-oxide reductase 86.3 22 0.00076 33.3 20.5 72 248-335 323-408 (638)
329 3das_A Putative oxidoreductase 83.5 22 0.00076 31.1 27.1 32 35-68 33-64 (347)
330 4gq2_M Nucleoporin NUP120; bet 81.9 47 0.0016 33.7 18.2 34 189-223 237-270 (950)
331 2xn4_A Kelch-like protein 2; s 81.8 22 0.00077 29.9 20.2 22 315-336 251-277 (302)
332 3sbq_A Nitrous-oxide reductase 81.3 2.7 9.2E-05 39.2 6.1 79 140-220 324-409 (638)
333 4gq2_M Nucleoporin NUP120; bet 79.6 35 0.0012 34.6 14.3 40 139-179 236-276 (950)
334 3qhy_B Beta-lactamase inhibito 79.0 28 0.00095 29.3 19.7 108 140-280 25-132 (282)
335 2wg3_C Hedgehog-interacting pr 78.8 30 0.001 31.7 12.5 29 248-276 14-44 (463)
336 3ii7_A Kelch-like protein 7; p 66.7 57 0.0019 27.4 20.9 22 315-336 247-273 (306)
337 2uvk_A YJHT; unknown function, 63.1 74 0.0025 27.4 17.5 25 314-338 315-345 (357)
338 4a9v_A PHOX; hydrolase, beta-p 60.5 52 0.0018 31.0 9.6 62 248-324 476-550 (592)
339 3zwu_A Alkaline phosphatase PH 60.1 49 0.0017 31.3 9.6 60 249-323 477-549 (592)
340 1zgk_A Kelch-like ECH-associat 59.6 78 0.0027 26.6 21.3 28 45-72 23-54 (308)
341 1cru_A Protein (soluble quinop 58.7 1.1E+02 0.0037 27.9 29.5 36 35-72 28-63 (454)
342 4fhn_B Nucleoporin NUP120; pro 57.5 74 0.0025 33.1 11.3 40 140-180 239-279 (1139)
343 2be1_A Serine/threonine-protei 56.4 35 0.0012 29.7 7.4 106 201-337 11-132 (339)
344 2vpj_A Kelch-like protein 12; 54.7 93 0.0032 25.9 18.8 22 315-336 159-185 (301)
345 2woz_A Kelch repeat and BTB do 54.6 97 0.0033 26.1 16.9 24 197-221 157-186 (318)
346 4fhn_B Nucleoporin NUP120; pro 53.3 37 0.0013 35.3 8.3 34 189-223 239-272 (1139)
347 3ott_A Two-component system se 51.6 1.8E+02 0.0062 28.3 28.4 120 139-277 419-545 (758)
348 3q6k_A 43.2 kDa salivary prote 50.7 1.3E+02 0.0045 26.5 18.8 156 160-335 124-306 (381)
349 3ii7_A Kelch-like protein 7; p 49.5 1.1E+02 0.0039 25.4 19.5 64 149-221 55-129 (306)
350 3f7f_A Nucleoporin NUP120; nuc 47.2 1.9E+02 0.0066 28.1 11.3 37 34-74 222-258 (729)
351 1zgk_A Kelch-like ECH-associat 38.4 1.7E+02 0.0059 24.4 16.2 64 149-221 168-242 (308)
352 2zwa_A Leucine carboxyl methyl 37.1 2.9E+02 0.01 26.6 21.6 65 149-221 451-524 (695)
353 4a9v_A PHOX; hydrolase, beta-p 36.1 2E+02 0.0067 27.2 9.3 60 139-206 476-548 (592)
354 3zwu_A Alkaline phosphatase PH 31.6 1.8E+02 0.0062 27.5 8.5 58 141-206 478-548 (592)
355 4asc_A Kelch repeat and BTB do 30.8 2.3E+02 0.008 23.6 21.2 20 49-70 7-26 (315)
356 2xn4_A Kelch-like protein 2; s 30.3 2.3E+02 0.0079 23.4 19.0 22 315-336 204-230 (302)
357 4hvt_A Ritya.17583.B, post-pro 28.3 4.2E+02 0.014 25.7 21.6 32 141-173 131-169 (711)
358 3f7f_A Nucleoporin NUP120; nuc 26.7 70 0.0024 31.0 4.8 28 314-342 229-256 (729)
359 3qhy_B Beta-lactamase inhibito 24.1 3.1E+02 0.01 22.7 15.7 146 139-336 102-247 (282)
360 3q6k_A 43.2 kDa salivary prote 23.7 3.8E+02 0.013 23.6 23.0 127 139-277 152-306 (381)
361 2uvk_A YJHT; unknown function, 21.3 3.8E+02 0.013 22.7 17.3 12 210-221 168-179 (357)
362 4asc_A Kelch repeat and BTB do 21.0 3.6E+02 0.012 22.4 19.1 22 315-336 196-222 (315)
363 2zwa_A Leucine carboxyl methyl 20.5 5.8E+02 0.02 24.5 15.8 158 148-337 396-579 (695)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.4e-44 Score=348.77 Aligned_cols=372 Identities=14% Similarity=0.129 Sum_probs=267.7
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCce-eEEeeecCCCCCccccccccccccee--------------
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVSSENTLLAEKNFM-------------- 94 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~-------------- 94 (421)
.+|.+.|++++| +|++++||+|+.|++|+|||+.+++ ........+.++|.+++|.+....+.
T Consensus 56 ~~h~~~v~~~~~--spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 56 TEHSHQTTVAKT--SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp CCCSSCEEEEEE--CTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred cCCCCceEEEEE--CCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 489999999999 7999999999999999999997544 22222334677888888887654433
Q ss_pred ------------------eccCCCCce-eeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEE
Q 014644 95 ------------------NEHNPPSFA-HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS 155 (421)
Q Consensus 95 ------------------~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s 155 (421)
++.++++.. .+++++. ++.+++|+.... +++..+ .+|...|++++|+|++++|++
T Consensus 134 wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~--D~~v~lwd~~~~---~~~~~l-~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD--DNTVAIFEGPPF---KFKSTF-GEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp TTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEET--TSCEEEEETTTB---EEEEEE-CCCSSCEEEEEECTTSSEEEE
T ss_pred eeCCCCcceecCCCCCceEEEECCCCCeEEEEEeC--CCeEEEEECCCC---eEeeee-ccccCceEEEEECCCCCEEEE
Confidence 233333333 2444443 568999998766 778888 899999999999999999999
Q ss_pred E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccch-------
Q 014644 156 A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSA------- 227 (421)
Q Consensus 156 ~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~------- 227 (421)
+ .|++|++||+. .++....+........+|.+.|.+++|+|++ .+|++++.|++|++||+++++......
T Consensus 208 ~s~D~~i~lwd~~-~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~ 285 (611)
T 1nr0_A 208 TGGDGTIVLYNGV-DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIED 285 (611)
T ss_dssp EETTSCEEEEETT-TCCEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGG
T ss_pred EECCCcEEEEECC-CCcEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccc
Confidence 9 99999999998 4555544311111123799999999999999 999999999999999998865431110
Q ss_pred ---------------------hhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 228 ---------------------RILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 228 ---------------------~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
+.++. ........+.+|...|.+++|+|+|++|++++. +.|++||+.+ ++....+
T Consensus 286 ~~~~~~~~~~~l~s~s~d~~i~~~~~--~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-~~~~~~~ 362 (611)
T 1nr0_A 286 QQLGIIWTKQALVSISANGFINFVNP--ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-GISNRVF 362 (611)
T ss_dssp CEEEEEECSSCEEEEETTCCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEECS
T ss_pred eeEEEEEcCCEEEEEeCCCcEEEEeC--CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC-Cceeeec
Confidence 00000 000011234678999999999999999999876 9999999975 4432221
Q ss_pred -eeccCccccccc------------------------------------------ccCCC--------------------
Q 014644 286 -KIHEHLRPKLCD------------------------------------------LYNND-------------------- 302 (421)
Q Consensus 286 -~~~~~~~~~~~~------------------------------------------~~~~~-------------------- 302 (421)
.+|...+..+.. .+..+
T Consensus 363 ~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~ 442 (611)
T 1nr0_A 363 PDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 442 (611)
T ss_dssp SCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE
T ss_pred ccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCce
Confidence 111111000000 00000
Q ss_pred ----cceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-
Q 014644 303 ----SIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA- 377 (421)
Q Consensus 303 ----~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~- 377 (421)
.-..+.+++|+|||++|++|+.|+.|++||+.++........+|...+.+++|+|+ ++ +|++++.|+.
T Consensus 443 ~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspd--g~-----~las~s~d~~v 515 (611)
T 1nr0_A 443 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN--GA-----FLVATDQSRKV 515 (611)
T ss_dssp EEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTT--SS-----EEEEEETTSCE
T ss_pred eeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCC--CC-----EEEEEcCCCCE
Confidence 00124689999999999999999999999998653222233789999999999999 44 8999999999
Q ss_pred ccCCCC---Ccccc-cc-ccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 378 HENSSS---GHHEL-SY-NLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 378 ~iw~~~---~~~~~-~~-~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
++|+.. +.... .. .|...|.+++|+||+++||+|+ ++.+++|+.
T Consensus 516 ~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 516 IPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp EEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 999432 22222 22 4899999999999999999999 566999974
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=318.26 Aligned_cols=284 Identities=16% Similarity=0.179 Sum_probs=239.8
Q ss_pred cccccccEEEEEEEEc--CCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 29 SLEIEEKINRVRWCAA--PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~--~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
..+|.+.|.+++|.+. +++.+|++|+.|++|+|||+.++..
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~------------------------------------- 70 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL------------------------------------- 70 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------------------------------------
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------------------------------------
Confidence 3589999999999543 2477999999999999999876441
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
.+...+ .+|...|.+++|++++.+++++ .|++|++||+. .++.+..+ ..
T Consensus 71 ---------------------~~~~~l-~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~-~~~~~~~~-------~~ 120 (321)
T 3ow8_A 71 ---------------------DLQWSL-EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQIKSI-------DA 120 (321)
T ss_dssp ---------------------EEEEEE-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEE-------EC
T ss_pred ---------------------eeeeee-ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC-CCCEEEEE-------eC
Confidence 222334 7999999999999999999999 99999999998 55555554 56
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
|...+.+++|+|++ ++|++++.|+.|++||++.++.. ..+.. +...+.+++|+|+|++|+++
T Consensus 121 ~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~----~~~~~-------------~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 121 GPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKE----YSLDT-------------RGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp CTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEE----EEEEC-------------SSSCEEEEEECTTSSEEEEE
T ss_pred CCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCcee----EEecC-------------CCceEEEEEECCCCCEEEEE
Confidence 77889999999999 99999999999999999886533 22222 36689999999999999998
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+. +.|++||+++ ++.+..+.+|...+ .+++|+|++++|++|+.||.|++||++++ .....+.
T Consensus 183 ~~dg~i~iwd~~~-~~~~~~~~~h~~~v---------------~~l~~spd~~~l~s~s~dg~i~iwd~~~~-~~~~~~~ 245 (321)
T 3ow8_A 183 AIDGIINIFDIAT-GKLLHTLEGHAMPI---------------RSLTFSPDSQLLVTASDDGYIKIYDVQHA-NLAGTLS 245 (321)
T ss_dssp ETTSCEEEEETTT-TEEEEEECCCSSCC---------------CEEEECTTSCEEEEECTTSCEEEEETTTC-CEEEEEC
T ss_pred cCCCeEEEEECCC-CcEEEEEcccCCce---------------eEEEEcCCCCEEEEEcCCCeEEEEECCCc-ceeEEEc
Confidence 76 9999999986 88888898888765 79999999999999999999999999987 6678899
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
+|...+..++|+|+ ...|++++.|+. ++|+ .+..+....+|...|.+++|+|+++.|++++ ++.+++|+
T Consensus 246 ~h~~~v~~~~~sp~-------~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 246 GHASWVLNVAFCPD-------DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp CCSSCEEEEEECTT-------SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCCceEEEEECCC-------CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 99999999999998 338999999999 9993 4455666778999999999999999999998 55699997
Q ss_pred C
Q 014644 421 A 421 (421)
Q Consensus 421 ~ 421 (421)
.
T Consensus 319 ~ 319 (321)
T 3ow8_A 319 C 319 (321)
T ss_dssp C
T ss_pred C
Confidence 4
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-43 Score=327.69 Aligned_cols=279 Identities=14% Similarity=0.233 Sum_probs=242.4
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|..+|++++| +|++.+|++|+.|++|+|||+.+++
T Consensus 105 ~gh~~~V~~~~~--~p~~~~l~s~s~Dg~i~vwd~~~~~----------------------------------------- 141 (410)
T 1vyh_C 105 SGHRSPVTRVIF--HPVFSVMVSASEDATIKVWDYETGD----------------------------------------- 141 (410)
T ss_dssp ECCSSCEEEEEE--CSSSSEEEEEESSSCEEEEETTTCC-----------------------------------------
T ss_pred cccCCcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCc-----------------------------------------
Confidence 489999999999 7899999999999999999998754
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
+.+.+ .+|.+.|.+++|+|++++|++| .|++|++||+. ..+++.. +.+|..
T Consensus 142 -------------------~~~~l-~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~-~~~~~~~-------~~~h~~ 193 (410)
T 1vyh_C 142 -------------------FERTL-KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ-GFECIRT-------MHGHDH 193 (410)
T ss_dssp -------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-SSCEEEC-------CCCCSS
T ss_pred -------------------EEEEE-eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeEE-------EcCCCC
Confidence 22334 7899999999999999999999 99999999998 5555543 478999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.|.+++|+|++ .+|++++.|++|++||++++... ..+.. |...|.++.++|++.+|++++.
T Consensus 194 ~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 194 NVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCV----KTFTG-------------HREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp CEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEE----EEEEC-------------CSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEE----EEEeC-------------CCccEEEEEECCCCCEEEEEcCC
Confidence 99999999999 99999999999999999987543 33444 4788999999999999999876
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC--------------------CCEEEEeeCCCe
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD--------------------GLHFATGSYSNL 327 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--------------------~~~l~~~s~dg~ 327 (421)
+.|++||+++ ++....+.+|...+ .+++|+|+ +.+|++|+.|+.
T Consensus 256 ~~v~vwd~~~-~~~~~~~~~h~~~v---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 256 QTVRVWVVAT-KECKAELREHRHVV---------------ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp SCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred CeEEEEECCC-CceeeEecCCCceE---------------EEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 9999999986 78888888888765 78999986 678999999999
Q ss_pred EEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccC
Q 014644 328 LRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPT 404 (421)
Q Consensus 328 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd 404 (421)
|++||+.++ .....+.+|...+..+.|+|+ + .+|++|+.|+. ++|+ .++.+....+|...|++++|+|+
T Consensus 320 i~iwd~~~~-~~~~~~~~h~~~v~~v~~~~~--g-----~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~ 391 (410)
T 1vyh_C 320 IKMWDVSTG-MCLMTLVGHDNWVRGVLFHSG--G-----KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 391 (410)
T ss_dssp EEEEETTTT-EEEEEEECCSSCEEEEEECSS--S-----SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSS
T ss_pred EEEEECCCC-ceEEEEECCCCcEEEEEEcCC--C-----CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCC
Confidence 999999987 677889999999999999988 3 38999999999 9993 44556667789999999999999
Q ss_pred CCeEEEec-CCceEEEeC
Q 014644 405 TNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 405 ~~~la~~~-~~~~~i~~~ 421 (421)
+++||+|+ ++.|++|+.
T Consensus 392 ~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 392 APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSCEEEEETTSEEEEEC-
T ss_pred CCEEEEEeCCCcEEEEeC
Confidence 99999999 566999973
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.3e-42 Score=306.53 Aligned_cols=279 Identities=15% Similarity=0.135 Sum_probs=231.8
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|.+.|++++| +|++.+|++++.||+|+|||++++.
T Consensus 11 ~h~~~V~~~~f--sp~~~~l~s~~~dg~v~lWd~~~~~------------------------------------------ 46 (304)
T 2ynn_A 11 NRSDRVKGIDF--HPTEPWVLTTLYSGRVELWNYETQV------------------------------------------ 46 (304)
T ss_dssp EECSCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTE------------------------------------------
T ss_pred CCCCceEEEEE--CCCCCEEEEEcCCCcEEEEECCCCc------------------------------------------
Confidence 68999999999 7999999999999999999998754
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
+++.+ ..|...|.+++|+|++++|++| .|++|++||+. .++.+..+ .+|...
T Consensus 47 ------------------~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~-~~~~~~~~-------~~h~~~ 99 (304)
T 2ynn_A 47 ------------------EVRSI-QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-TGEKVVDF-------EAHPDY 99 (304)
T ss_dssp ------------------EEEEE-ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-TCCEEEEE-------ECCSSC
T ss_pred ------------------eeEEe-eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-CCcEEEEE-------eCCCCc
Confidence 22334 6788899999999999999999 99999999998 45555444 789999
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC-
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY- 267 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~- 267 (421)
|.+++|+|++ .+|++++.|++|++||++++... ...+. +|...|.+++|+| ++.+|++++.
T Consensus 100 v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~---~~~~~-------------~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 100 IRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWAL---EQTFE-------------GHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp EEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEE---EEEEC-------------CCCSCEEEEEECTTCTTEEEEEETT
T ss_pred EEEEEEcCCC-CEEEEECCCCeEEEEECCCCcch---hhhhc-------------ccCCcEEEEEECCCCCCEEEEEeCC
Confidence 9999999999 99999999999999999875322 12333 3588999999999 6788998875
Q ss_pred CeEEEEECCCCCcceeEEe-eccCcccccccccCCCcceeeeEEEEcC--CCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 268 MNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSG--DGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+.|++||++. ..+...+. ++...+ ..++|+| ++++|++|+.|+.|++||++++ .....+.
T Consensus 163 ~~v~iwd~~~-~~~~~~~~~~~~~~v---------------~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~ 225 (304)
T 2ynn_A 163 RTVKVWSLGQ-STPNFTLTTGQERGV---------------NYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLE 225 (304)
T ss_dssp SEEEEEETTC-SSCSEEEECCCTTCE---------------EEEEECCSTTCCEEEEEETTSEEEEEETTTT-EEEEEEE
T ss_pred CeEEEEECCC-CCccceeccCCcCcE---------------EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC-ccceeeC
Confidence 9999999986 55444443 333322 5677776 7889999999999999999987 7788999
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccCCC--eEEEecCCceEEE
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPTTN--LIACANGNSLFFH 419 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd~~--~la~~~~~~~~i~ 419 (421)
+|...+..++|+|+ ...|++|+.|+. ++|+ ..+.......+...+.+++|+|++. +||+|+++++.+|
T Consensus 226 ~h~~~v~~~~~~p~-------~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~ 298 (304)
T 2ynn_A 226 GHMSNVSFAVFHPT-------LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (304)
T ss_dssp CCSSCEEEEEECSS-------SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred CCCCCEEEEEECCC-------CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEE
Confidence 99999999999998 348999999999 9993 3455556667788999999999985 5899999999988
Q ss_pred eC
Q 014644 420 YA 421 (421)
Q Consensus 420 ~~ 421 (421)
..
T Consensus 299 ~~ 300 (304)
T 2ynn_A 299 SL 300 (304)
T ss_dssp EC
T ss_pred Ee
Confidence 63
No 5
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=319.66 Aligned_cols=373 Identities=39% Similarity=0.677 Sum_probs=270.3
Q ss_pred cccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCcee---------EEeeec-CCCCCcccccccccccceeeccC
Q 014644 29 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKV---------KKIKEM-DHFPFVSSENTLLAEKNFMNEHN 98 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~---------~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ 98 (421)
.+.|.+.|++++| +|++++||+|+.||.|+|||+.+++. ...... .|..+...+........+.++.+
T Consensus 24 ~~~~~~~V~~v~~--s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 24 DVAEADIISTVEF--NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CCCGGGSEEEEEE--CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccccCcEEEEEE--CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 3567899999999 78999999999999999999987651 111111 23210000000000134555555
Q ss_pred CCCc--eeeeecccccccceeEEeecccce------------------------------------eeeeeeecCCCCcc
Q 014644 99 PPSF--AHGYHLEWTENMATKIANVGNSVH------------------------------------ARCQKVYPHAHDFN 140 (421)
Q Consensus 99 ~~~~--~~~~~g~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~h~~~ 140 (421)
.++. ..+..++. ++.+++|++..... ..+.+.+..+|...
T Consensus 102 ~~~~~~~~l~s~s~--d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 102 LPQKNAAQFLLSTN--DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CCCCSSSEEEEEEC--SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred cCCCCcceEEEeCC--CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 5554 45555544 67899999876321 12233444789999
Q ss_pred eEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcc
Q 014644 141 INSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQS 220 (421)
Q Consensus 141 v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~ 220 (421)
|.+++|+|++++|++|.|++|++||++..++.+..+..++..+.+|...|.+++|+|+++.+|++++.||.|++||++++
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 99999999999999999999999999855667776666666778999999999999997689999999999999999987
Q ss_pred cccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccC
Q 014644 221 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYN 300 (421)
Q Consensus 221 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
.........+..| ..+.....+..|...|.+++|+|+|++|++++++.|++||+++.++++..+.+|......++..++
T Consensus 260 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 260 ALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSSCTTCEEECCC------CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred ccccceeeEeccC-CCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccccccccccc
Confidence 7533333455553 223334445556679999999999999999877999999998658888899999877766666777
Q ss_pred CCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCcccC
Q 014644 301 NDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHEN 380 (421)
Q Consensus 301 ~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw 380 (421)
.++++++..++|+|++++|++|+.||.|++||+.++ ....+.++..+.......+.+ .+..++....
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--- 405 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK--RDITLEASRENNKPRTVLKPR--------KVCASGKRKK--- 405 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC--CEEEEECCSTTCCTTCBCCCC--------CEECSSCCCT---
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC--cceeeeecccccccccccCCc--------cccccCCccc---
Confidence 788877778999999999999999999999999976 334677777665544433321 2222222211
Q ss_pred CCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 381 SSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 381 ~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
.+......++...|..++|||++++||+++.+++++|++
T Consensus 406 --~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 406 --DEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp --TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred --ccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 122233446678899999999999999999999999974
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-41 Score=307.81 Aligned_cols=281 Identities=14% Similarity=0.136 Sum_probs=233.1
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| ++++++|++|+.||+|++||+.+++
T Consensus 52 ~gH~~~v~~~~~--s~d~~~l~s~s~Dg~v~iWd~~~~~----------------------------------------- 88 (340)
T 1got_B 52 RGHLAKIYAMHW--GTDSRLLLSASQDGKLIIWDSYTTN----------------------------------------- 88 (340)
T ss_dssp CCCSSCEEEEEE--CTTSSEEEEEETTTEEEEEETTTCC-----------------------------------------
T ss_pred cCCCCceEEEEE--CCCCCEEEEEeCCCcEEEEECCCCC-----------------------------------------
Confidence 379999999999 7999999999999999999987754
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
++..+ ..|...|.+++|+|++++|+++ .|+.|++|++.......... ..+.+|..
T Consensus 89 -------------------~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~----~~~~~h~~ 144 (340)
T 1got_B 89 -------------------KVHAI-PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVS----RELAGHTG 144 (340)
T ss_dssp -------------------EEEEE-ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEE----EEEECCSS
T ss_pred -------------------cceEe-ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeE----EEecCCCc
Confidence 12223 5788899999999999999999 99999999998443222211 12378999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.|.++.|++++ .+++++.|++|++||+++++.. ..+.. |...|.+++|+|+++++++++.
T Consensus 145 ~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 145 YLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQT----TTFTG-------------HTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp CEEEEEEEETT--EEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCC--cEEEEECCCcEEEEECCCCcEE----EEEcC-------------CCCceEEEEECCCCCEEEEEeCC
Confidence 99999999986 4889999999999999987543 33334 4789999999999999999875
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe--c
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE--A 345 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~--~ 345 (421)
+.|++||+++ +.....+.+|...+ .+++|+|++++|++|+.||.|++||++++ .....+. .
T Consensus 206 ~~v~~wd~~~-~~~~~~~~~h~~~v---------------~~v~~~p~~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~ 268 (340)
T 1got_B 206 ASAKLWDVRE-GMCRQTFTGHESDI---------------NAICFFPNGNAFATGSDDATCRLFDLRAD-QELMTYSHDN 268 (340)
T ss_dssp SCEEEEETTT-CSEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCTT
T ss_pred CcEEEEECCC-CeeEEEEcCCcCCE---------------EEEEEcCCCCEEEEEcCCCcEEEEECCCC-cEEEEEccCC
Confidence 9999999986 88888888888755 79999999999999999999999999976 3333333 2
Q ss_pred CCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 346 GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
+...+..++|+|+ + .+|++|+.|+. ++|+ .........+|...|.+++|+|++.+||+|+ ++.|+||+
T Consensus 269 ~~~~v~~~~~s~~--g-----~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKS--G-----RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTT--S-----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCC--C-----CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 3347889999998 3 48999999999 9993 4455566778999999999999999999999 55699996
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.2e-41 Score=327.77 Aligned_cols=345 Identities=14% Similarity=0.098 Sum_probs=255.9
Q ss_pred ccccccEEEEEEEEcCCCC-eEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~-~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...|++++| +|++. .|++|+.|++|++||..+++..... ..|.. .+.++.+++++.+++++
T Consensus 144 ~gh~~~v~~v~f--~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~------------~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 144 TGQARAMNSVDF--KPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTK------------FVHSVRYNPDGSLFAST 208 (611)
T ss_dssp CCCSSCEEEEEE--CSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSS------------CEEEEEECTTSSEEEEE
T ss_pred cCCCCCceEEEE--CCCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccC------------ceEEEEECCCCCEEEEE
Confidence 479999999999 68876 6999999999999998877633222 22444 45566666777777777
Q ss_pred ccccccceeEEeecccceeeeeeeecC------CCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecC--
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPH------AHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK-- 179 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~-- 179 (421)
+. ++.+++|+..++ +++..+.. +|.+.|.+++|+|++++|+++ .|++|++||+. .+++...+...
T Consensus 209 s~--D~~i~lwd~~~g---~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~-~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 209 GG--DGTIVLYNGVDG---TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA-TLKVEKTIPVGTR 282 (611)
T ss_dssp ET--TSCEEEEETTTC---CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEEECCSS
T ss_pred EC--CCcEEEEECCCC---cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCC-CCceeeeecCCCC
Confidence 76 678999998876 55555522 799999999999999999999 99999999998 44444332110
Q ss_pred ----------------------------------CCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCccccccc
Q 014644 180 ----------------------------------PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDH 225 (421)
Q Consensus 180 ----------------------------------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 225 (421)
...+.+|...|.+++|+|++ ++|++++.|++|++||+.++.....
T Consensus 283 ~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEC
T ss_pred ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEECCCCceeee
Confidence 01235799999999999999 9999999999999999987643210
Q ss_pred c---------------------------hhhhcccc---------------------ccCCCcc----------------
Q 014644 226 S---------------------------ARILRDAA---------------------ESHGSKS---------------- 241 (421)
Q Consensus 226 ~---------------------------~~~~~~h~---------------------~~~~~~~---------------- 241 (421)
. ++.+.... ..+....
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 0 00010000 0000000
Q ss_pred -cccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcc--eeEEeeccCcccccccccCCCcceeeeEEEEcCCCC
Q 014644 242 -FFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 317 (421)
Q Consensus 242 -~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 317 (421)
....|...+.+++|+|||++|++|+. ++|++||+.. +.. +.. .+|...+ .+++|+|+|+
T Consensus 442 ~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~-~~~~~~~~-~~h~~~v---------------~~v~fspdg~ 504 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG-ASVSEVKT-IVHPAEI---------------TSVAFSNNGA 504 (611)
T ss_dssp EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET-TEEEEEEE-EECSSCE---------------EEEEECTTSS
T ss_pred eeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccC-Cceeeeec-cCCCCce---------------EEEEECCCCC
Confidence 00013456789999999999999976 9999999975 432 223 4566544 7999999999
Q ss_pred EEEEeeCCCeEEEEecCCCCCceeE--EecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC--C-cc-cccc
Q 014644 318 HFATGSYSNLLRIFSHGVGSAGGIT--VEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS--G-HH-ELSY 390 (421)
Q Consensus 318 ~l~~~s~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~--~-~~-~~~~ 390 (421)
+|++++.|++|++|++.+....... +.+|...|.+++|+|+ ++ +|++|+.|+. ++|+.. + .. ....
T Consensus 505 ~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspd--g~-----~lasgs~D~~v~lW~~~~~~~~~~~~~~ 577 (611)
T 1nr0_A 505 FLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD--NV-----RLATGSLDNSVIVWNMNKPSDHPIIIKG 577 (611)
T ss_dssp EEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT--SS-----EEEEEETTSCEEEEETTCTTSCCEEETT
T ss_pred EEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCC--CC-----EEEEEECCCcEEEEECCCcccccchhhc
Confidence 9999999999999999873233332 4459999999999999 44 8999999999 999432 2 22 3456
Q ss_pred cc-ccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 391 NL-SSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 391 ~~-~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
+| ...|.+++|+||++ |++++ ++.+++|+.
T Consensus 578 ~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 578 AHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp SSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred cCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 78 78999999999999 77777 667999984
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-41 Score=302.58 Aligned_cols=292 Identities=17% Similarity=0.250 Sum_probs=228.0
Q ss_pred cccccc-cccc-cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCc
Q 014644 25 DYLKSL-EIEE-KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 102 (421)
Q Consensus 25 ~~~~~~-~h~~-~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 102 (421)
..+..+ +|.+ .|.+++| +|++++||+|+.|++|+|||+.++...
T Consensus 6 ~~~~~~~~h~~~~v~~l~~--sp~g~~las~~~D~~i~iw~~~~~~~~-------------------------------- 51 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAW--NPAGTLLASCGGDRRIRIWGTEGDSWI-------------------------------- 51 (345)
T ss_dssp EEEEEECCSTTSCEEEEEE--CTTSSCEEEEETTSCEEEEEEETTEEE--------------------------------
T ss_pred EEeeeecCCCCCcEEEEEE--CCCCCEEEEEcCCCeEEEEEcCCCcce--------------------------------
Confidence 334433 5776 8999999 799999999999999999998775411
Q ss_pred eeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCc-eeeeeeecCC
Q 014644 103 AHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD-QCFNIVDMKP 180 (421)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~-~~~~~~~~~~ 180 (421)
+...+..+|...|.+++|+|++++|+++ .|++|++|++.... +++..
T Consensus 52 --------------------------~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~----- 100 (345)
T 3fm0_A 52 --------------------------CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT----- 100 (345)
T ss_dssp --------------------------EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE-----
T ss_pred --------------------------eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE-----
Confidence 1111226899999999999999999999 99999999987332 23333
Q ss_pred CCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC
Q 014644 181 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 260 (421)
Q Consensus 181 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (421)
+.+|...|.+++|+|++ ++|++++.|++|++||++.+... ..... +..|...|.+++|+|+++
T Consensus 101 --~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~-~~~~~-------------~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 101 --LEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEY-ECVSV-------------LNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp --ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCE-EEEEE-------------ECCCCSCEEEEEECSSSS
T ss_pred --ccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCe-EEEEE-------------ecCcCCCeEEEEECCCCC
Confidence 37899999999999999 99999999999999999875321 01122 234578999999999999
Q ss_pred EEEEecC-CeEEEEECCCCCc--ceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC
Q 014644 261 HLLSRDY-MNLKLWDIRMDST--PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 261 ~l~~~~~-~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
+|++++. +.|++||++. +. +...+.+|...+ .+++|+|+|++|++|+.|++|+||+.....
T Consensus 164 ~l~s~s~d~~i~~w~~~~-~~~~~~~~~~~h~~~v---------------~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEE-DDWVCCATLEGHESTV---------------WSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp CEEEEETTSCEEEEEEET-TEEEEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred EEEEEeCCCcEEEEEecC-CCEEEEEEecCCCCce---------------EEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 9999876 9999999975 43 345677777755 899999999999999999999999974321
Q ss_pred C--------------ceeEEec-CCCCccceeeecCCcccccccceeeeecccCc-ccCCCC--C----cc-----cccc
Q 014644 338 A--------------GGITVEA-GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS--G----HH-----ELSY 390 (421)
Q Consensus 338 ~--------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~--~----~~-----~~~~ 390 (421)
. ....+.+ |...+..++|+++ ...|++++.|+. ++|... . .. ....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-------~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQL-------TGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTT-------TCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETT
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecC-------CCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecc
Confidence 1 1223333 8889999999988 348999999999 999321 1 11 1124
Q ss_pred ccccCeEEEEEccCCC-eEEEec-CCceEEEeC
Q 014644 391 NLSSKLLHLAWHPTTN-LIACAN-GNSLFFHYA 421 (421)
Q Consensus 391 ~~~~~v~~~~~spd~~-~la~~~-~~~~~i~~~ 421 (421)
+|...|++++|+|+++ +||+++ ++.+++|+.
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 7889999999999985 899888 566999973
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.8e-41 Score=310.08 Aligned_cols=293 Identities=14% Similarity=0.148 Sum_probs=234.0
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +|++++|++|+.|++|+|||+.+++
T Consensus 63 ~gH~~~V~~~~~--sp~~~~l~s~s~D~~v~iWd~~~~~----------------------------------------- 99 (380)
T 3iz6_a 63 QGHSGKVYSLDW--TPEKNWIVSASQDGRLIVWNALTSQ----------------------------------------- 99 (380)
T ss_dssp CCCSSCEEEEEE--CTTSSCEEEEETTSEEEEEETTTTE-----------------------------------------
T ss_pred cccccEEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCc-----------------------------------------
Confidence 479999999999 7899999999999999999988754
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
+...+ ..|...|.+++|+|++++|++| .|+.+++|++.......... .....+.+|.+
T Consensus 100 -------------------~~~~~-~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~-~~~~~~~gh~~ 158 (380)
T 3iz6_a 100 -------------------KTHAI-KLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNM-PVSRVLTGHKG 158 (380)
T ss_dssp -------------------EEEEE-ECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSS-TTCCBCCCCSS
T ss_pred -------------------cceEE-ecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCc-cceeeccCCCc
Confidence 22233 6788899999999999999999 99999999997321110000 00124578999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~ 267 (421)
.|.++.|+|++...|++++.|++|++||+++++.. ..+.. ....+|...|.+++|+| ++.+|++|+.
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~----~~~~~--------~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI----SIFGS--------EFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE----EEECC--------CSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE----EEeec--------ccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 99999999986578999999999999999987643 22211 01134578999999987 7889999875
Q ss_pred -CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecC
Q 014644 268 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAG 346 (421)
Q Consensus 268 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~ 346 (421)
+.|++||++..+..+..+.+|...+ .+++|+|++++|++|+.||+|++||++++ .....+..+
T Consensus 227 D~~v~~wd~~~~~~~~~~~~~h~~~v---------------~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~~ 290 (380)
T 3iz6_a 227 DTTVRLWDLRITSRAVRTYHGHEGDI---------------NSVKFFPDGQRFGTGSDDGTCRLFDMRTG-HQLQVYNRE 290 (380)
T ss_dssp TSCEEEEETTTTCCCCEEECCCSSCC---------------CEEEECTTSSEEEEECSSSCEEEEETTTT-EEEEEECCC
T ss_pred CCeEEEEECCCCCcceEEECCcCCCe---------------EEEEEecCCCeEEEEcCCCeEEEEECCCC-cEEEEeccc
Confidence 9999999986567888898888865 79999999999999999999999999987 445555443
Q ss_pred C-------CCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccc----cccccCeEEEEEccCCCeEEEec
Q 014644 347 K-------NENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELS----YNLSSKLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 347 ~-------~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~----~~~~~~v~~~~~spd~~~la~~~ 412 (421)
. ..+..++|+|+ + .+|++|+.|+. ++|+ .++..... .+|...|++++|+||+++||+|+
T Consensus 291 ~~~~~~~~~~v~~~~~s~~--g-----~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSIS--G-----RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp CSSSCCSSCSCSEEEECSS--S-----SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred ccccccccCceEEEEECCC--C-----CEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 3 24788999998 4 48999999999 9994 33333332 47889999999999999999999
Q ss_pred -CCceEEEeC
Q 014644 413 -GNSLFFHYA 421 (421)
Q Consensus 413 -~~~~~i~~~ 421 (421)
++.++||+.
T Consensus 364 ~D~~i~iW~~ 373 (380)
T 3iz6_a 364 WDKNLKIWAF 373 (380)
T ss_dssp TTSCEEEEEC
T ss_pred CCCCEEEEec
Confidence 567999973
No 10
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-40 Score=319.12 Aligned_cols=314 Identities=18% Similarity=0.239 Sum_probs=259.4
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|...|++++| +|++.++++++.|++|++||........+. .+.. .+.++.++++...++.++
T Consensus 259 ~~~~~~v~~v~~--~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~--~h~~------------~v~~~~~~~~~~~l~t~~ 322 (577)
T 2ymu_A 259 TGHSSSVNGVAF--RPDGQTIASASDDKTVKLWNRNGQLLQTLT--GHSS------------SVWGVAFSPDGQTIASAS 322 (577)
T ss_dssp CCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTSCEEEEEC--CCSS------------CEEEEEECTTSSEEEEEE
T ss_pred ecCCCCEEEEEE--cCCCCEEEEEeCCCEEEEEeCCCcEEEEEe--cCCC------------CeEEEEECCCCCEEEEEe
Confidence 368999999999 799999999999999999997654433332 2344 445555666666666665
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
. ++.+++|+... ..+..+ .+|...|.+++|+|++++|+++ .|+.|++||.. ++.+..+ .+|..
T Consensus 323 ~--d~~i~~w~~~~----~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~--~~~~~~~-------~~~~~ 386 (577)
T 2ymu_A 323 D--DKTVKLWNRNG----QHLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTL-------TGHSS 386 (577)
T ss_dssp T--TSCEEEEETTS----CEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--CCEEEEE-------ECCSS
T ss_pred C--CCeEEEEeCCC----CeeEEE-eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC--CCEEEEe-------cCCCC
Confidence 4 56789999764 445566 7999999999999999999999 99999999975 4555544 67899
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.|.+++|+|++ ++|++++.|+.|++||... +.. ..+. +|...|.+++|+||+++|++++.
T Consensus 387 ~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~~-~~~----~~~~-------------~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 387 SVRGVAFSPDG-QTIASASDDKTVKLWNRNG-QLL----QTLT-------------GHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp CEEEEEECTTS-SCEEEEETTSEEEEECTTC-CEE----EEEE-------------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEECCCC-CEEEEEeCCCEEEEEeCCC-CEE----EEec-------------CCCCCeEEEEECCCCCEEEEEcCC
Confidence 99999999999 9999999999999999643 221 2333 34789999999999999999876
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
+.|++||.. ++.+..+.+|...+ .+++|+|++++|++++.|+.|++||.. ......+.+|.
T Consensus 448 ~~v~~w~~~--~~~~~~~~~~~~~v---------------~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~h~ 508 (577)
T 2ymu_A 448 KTVKLWNRN--GQLLQTLTGHSSSV---------------RGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHS 508 (577)
T ss_dssp SEEEEEETT--SCEEEEEECCSSCE---------------EEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEECCS
T ss_pred CEEEEEECC--CCEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeCCC
Confidence 999999974 67788888887755 799999999999999999999999964 36788899999
Q ss_pred CCccceeeecCCcccccccceeeeecccCc-ccCC-CCCccccccccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS-SSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~-~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
..|..++|+|+ ++ +|++++.|+. ++|+ .++.+....+|...|++++|+||+++|++++ ++.|++|+
T Consensus 509 ~~v~~l~~s~d--g~-----~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 509 SSVRGVAFSPD--GQ-----TIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECTT--SS-----CEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCC--CC-----EEEEEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999998 44 8999999999 9994 4455666779999999999999999999988 55699996
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-40 Score=296.35 Aligned_cols=282 Identities=13% Similarity=0.159 Sum_probs=226.7
Q ss_pred ccccccEEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|.+.|++++| +++ +++|++|+.|++|++|++.......
T Consensus 14 ~gH~~~V~~l~~--~~~~~~~l~s~s~D~~v~~W~~~~~~~~~------------------------------------- 54 (319)
T 3frx_A 14 EGHNGWVTSLAT--SAGQPNLLLSASRDKTLISWKLTGDDQKF------------------------------------- 54 (319)
T ss_dssp CCCSSCEEEEEE--CSSCTTEEEEEETTSEEEEEEEEEETTEE-------------------------------------
T ss_pred ccccceEEEEEc--cCCCccEEEEecCCccEEEecCCCCCccc-------------------------------------
Confidence 378999999999 565 5899999999999999986432000
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
..+++.+ .+|...|.+++|+|++++|+++ .|++|++||+. .++.+..+ .+|.
T Consensus 55 ------------------~~~~~~~-~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~-~~~~~~~~-------~~h~ 107 (319)
T 3frx_A 55 ------------------GVPVRSF-KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA-TGETYQRF-------VGHK 107 (319)
T ss_dssp ------------------EEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE-------ECCS
T ss_pred ------------------cccceEE-eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC-CCCeeEEE-------ccCC
Confidence 1445566 8999999999999999999999 99999999998 55655544 7899
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC------CCE
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND------GQH 261 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~------~~~ 261 (421)
..|.+++|+|++ .+|++++.|++|++||++.... ..+. +|...+.++.|+|+ +..
T Consensus 108 ~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~~~-----~~~~-------------~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 108 SDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQCL-----ATLL-------------GHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp SCEEEEEECTTS-CEEEEEETTSCEEEEETTSCEE-----EEEC-------------CCSSCEEEEEECCC------CCE
T ss_pred CcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeE-----EEEe-------------ccCCcEEEEEEccCCCCCCCccE
Confidence 999999999999 9999999999999999975321 2233 34788999999985 447
Q ss_pred EEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCce
Q 014644 262 LLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGG 340 (421)
Q Consensus 262 l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~ 340 (421)
+++++. +.|++||+++ .+....+.+|...+ .+++|+|++++|++|+.||.|++||+.++ ...
T Consensus 169 l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v---------------~~~~~sp~g~~l~s~~~dg~i~iwd~~~~-~~~ 231 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQ-FQIEADFIGHNSNI---------------NTLTASPDGTLIASAGKDGEIMLWNLAAK-KAM 231 (319)
T ss_dssp EEEEETTSCEEEEETTT-TEEEEEECCCCSCE---------------EEEEECTTSSEEEEEETTCEEEEEETTTT-EEE
T ss_pred EEEEeCCCEEEEEECCc-chhheeecCCCCcE---------------EEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEE
Confidence 888765 9999999986 77778888888765 79999999999999999999999999987 555
Q ss_pred eEEecCCCCccceeeecCCcccccccceeeeecccCcccCCCCC--ccc--------cccccccCeEEEEEccCCCeEEE
Q 014644 341 ITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSG--HHE--------LSYNLSSKLLHLAWHPTTNLIAC 410 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~--~~~--------~~~~~~~~v~~~~~spd~~~la~ 410 (421)
..+.. ..++..++|+|+ + ..|+++..++.++|.... ... ....+...+.+++|+|||++|++
T Consensus 232 ~~~~~-~~~v~~~~~sp~--~-----~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 232 YTLSA-QDEVFSLAFSPN--R-----YWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp EEEEC-CSCEEEEEECSS--S-----SEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred EEecC-CCcEEEEEEcCC--C-----CEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 55654 468999999998 3 378888777668883221 111 12234667999999999999999
Q ss_pred ec-CCceEEEeC
Q 014644 411 AN-GNSLFFHYA 421 (421)
Q Consensus 411 ~~-~~~~~i~~~ 421 (421)
|+ ++.|++|+.
T Consensus 304 g~~Dg~i~vWd~ 315 (319)
T 3frx_A 304 GYTDNVIRVWQV 315 (319)
T ss_dssp EETTSCEEEEEE
T ss_pred eecCceEEEEEE
Confidence 98 556999973
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=303.16 Aligned_cols=294 Identities=11% Similarity=0.123 Sum_probs=220.5
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeec-CCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
..|+..|.+++| +|+|.+|++++ |+++|+||..... .... ..+.
T Consensus 27 ~~~~~~v~~~~f--s~dG~~l~~~s-d~~~r~Wd~~~~~---~~~~~~~~~----------------------------- 71 (344)
T 4gqb_B 27 ACMERQLEAARY--RSDGALLLGAS-SLSGRCWAGSLWL---FKDPCAAPN----------------------------- 71 (344)
T ss_dssp SSCCSEEEEEEE--CTTSCEEEEEE-CCSSSCCCEEEEE---ESSGGGTTC-----------------------------
T ss_pred ccccCCEEEEEE--CCCCCEEEEEe-CCceEEeeceeee---eccccccCC-----------------------------
Confidence 356788999999 79999988777 8899999843211 1000 0000
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
...+... ..|...|.+++|+|++ .|++| .||+|+|||++++ +...... ..+.+|.
T Consensus 72 -----------------~~~~~~~--~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~-~~~~~~~---~~~~~H~ 127 (344)
T 4gqb_B 72 -----------------EGFCSAG--VQTEAGVADLTWVGER-GILVASDSGAVELWELDEN-ETLIVSK---FCKYEHD 127 (344)
T ss_dssp -----------------GGGCSEE--EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTT-SSCEEEE---EEEECCS
T ss_pred -----------------cceeeee--eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCC-CceeEee---ccccCCC
Confidence 0011111 2466789999999986 56666 9999999999844 3332221 1235899
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEEEec
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSRD 266 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~ 266 (421)
..|++++|+|++ ++|++++.|++|++||+.+++.. ..+.. |...|.+++|+|++. +|++++
T Consensus 128 ~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~----~~~~~-------------h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 128 DIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVL----SSYRA-------------HAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCEEEEEECSSCTTEEEEEE
T ss_pred CCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEE----EEEcC-------------cCCceEEEEecCCCCCceeeec
Confidence 999999999999 99999999999999999987644 44444 488999999999985 677776
Q ss_pred C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC-CCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 267 Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD-GLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 267 ~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
. ++|++||+++ +++...+..+.... .+.+++|+|+ +++|++|+.||.|++||++++ .....+.
T Consensus 190 ~D~~v~iwd~~~-~~~~~~~~~~~~~~-------------~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-~~~~~~~ 254 (344)
T 4gqb_B 190 EDNRILLWDTRC-PKPASQIGCSAPGY-------------LPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-SCVLSSA 254 (344)
T ss_dssp TTSCEEEEETTS-SSCEEECC----CC-------------CEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEE
T ss_pred cccccccccccc-cceeeeeecceeec-------------cceeeeecCCCCcceEEeccCCcEEEEECCCC-cEEEEEc
Confidence 5 9999999987 77776654332211 1268999995 678999999999999999987 6788899
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCc-ccCCC-CCccccccccccCeEEEEEccCCC-eEEEec-CCceEEEe
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS-SGHHELSYNLSSKLLHLAWHPTTN-LIACAN-GNSLFFHY 420 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~-~~~~~~~~~~~~~v~~~~~spd~~-~la~~~-~~~~~i~~ 420 (421)
+|...|.+++|+|+ +. .+|++|+.|+. ++|+. .+.+....+|...|++++|+|+++ +|++++ ++.|++|+
T Consensus 255 ~h~~~v~~v~fsp~--g~----~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 255 VHSQCVTGLVFSPH--SV----PFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp CCSSCEEEEEECSS--SS----CCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEEccC--CC----eEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 99999999999997 32 27899999999 99943 344556678999999999999987 466777 67799997
Q ss_pred C
Q 014644 421 A 421 (421)
Q Consensus 421 ~ 421 (421)
.
T Consensus 329 v 329 (344)
T 4gqb_B 329 V 329 (344)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.3e-40 Score=299.86 Aligned_cols=284 Identities=13% Similarity=0.137 Sum_probs=231.0
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +|++.+|++|+.|++|+|||..+++.
T Consensus 61 ~gH~~~V~~~~~--s~d~~~l~s~s~Dg~v~vWd~~~~~~---------------------------------------- 98 (354)
T 2pbi_B 61 KGHGNKVLCMDW--CKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------------------- 98 (354)
T ss_dssp ECCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCE----------------------------------------
T ss_pred cCCCCeEEEEEE--CCCCCEEEEEeCCCeEEEEECCCCCc----------------------------------------
Confidence 389999999999 78999999999999999999876541
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
...+ ..|...|.+++|+|++.+|+++ .|+.+++|++......... .....+.+|..
T Consensus 99 --------------------~~~~-~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~--~~~~~~~~h~~ 155 (354)
T 2pbi_B 99 --------------------EHAV-TMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA--AKKKSVAMHTN 155 (354)
T ss_dssp --------------------EEEE-ECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG--GGCEEEEECSS
T ss_pred --------------------ceEE-ecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccc--ccceeeeccCC
Confidence 1122 4577789999999999999999 9999999998632110000 00012367999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC--CCCEEEEec
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN--DGQHLLSRD 266 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~ 266 (421)
.|.+++|+|++ ..|++++.|++|++||+++++.. ..+.. |...|.+++|+| +|.+|++++
T Consensus 156 ~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 156 YLSACSFTNSD-MQILTASGDGTCALWDVESGQLL----QSFHG-------------HGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp CEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEE----EEEEC-------------CSSCEEEEEECCCSSCCEEEEEE
T ss_pred cEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEE----EEEcC-------------CCCCeEEEEEEeCCCCCEEEEEe
Confidence 99999999998 99999999999999999987643 34444 478899999987 478999987
Q ss_pred C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec
Q 014644 267 Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA 345 (421)
Q Consensus 267 ~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~ 345 (421)
. +.|++||+++ ++++..+.+|...+ .+++|+|++.+|++|+.|++|++||++.. .....+..
T Consensus 218 ~Dg~v~~wd~~~-~~~~~~~~~h~~~v---------------~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~ 280 (354)
T 2pbi_B 218 CDKKAMVWDMRS-GQCVQAFETHESDV---------------NSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSK 280 (354)
T ss_dssp TTSCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECC
T ss_pred CCCeEEEEECCC-CcEEEEecCCCCCe---------------EEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcC
Confidence 5 9999999997 88888888888765 79999999999999999999999999876 33444443
Q ss_pred C--CCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccCCCeEEEec-CCceEEE
Q 014644 346 G--KNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFH 419 (421)
Q Consensus 346 ~--~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~ 419 (421)
+ ...+..+.|+|+ + .+|++|+.|+. ++|+ .+..+....+|...|++++|+||+++||+|+ ++.+++|
T Consensus 281 ~~~~~~~~~~~~s~~--g-----~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 281 ESIIFGASSVDFSLS--G-----RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp TTCCSCEEEEEECTT--S-----SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCcccceeEEEEeCC--C-----CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 3 346778899988 3 48999999999 9993 4555666778999999999999999999999 5569999
Q ss_pred e
Q 014644 420 Y 420 (421)
Q Consensus 420 ~ 420 (421)
+
T Consensus 354 ~ 354 (354)
T 2pbi_B 354 A 354 (354)
T ss_dssp C
T ss_pred C
Confidence 5
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-39 Score=291.12 Aligned_cols=281 Identities=22% Similarity=0.328 Sum_probs=230.6
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +|++++|++++.|+.|++|++.+++
T Consensus 20 ~gh~~~v~~~~~--s~~~~~l~s~~~dg~i~iw~~~~~~----------------------------------------- 56 (312)
T 4ery_A 20 AGHTKAVSSVKF--SPNGEWLASSSADKLIKIWGAYDGK----------------------------------------- 56 (312)
T ss_dssp CCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCC-----------------------------------------
T ss_pred cccCCcEEEEEE--CCCCCEEEEeeCCCeEEEEeCCCcc-----------------------------------------
Confidence 478999999999 7899999999999999999987754
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
..+.+ .+|...|.+++|+|++++|+++ .|+.|++||++ .++.+..+ .+|..
T Consensus 57 -------------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~-------~~~~~ 108 (312)
T 4ery_A 57 -------------------FEKTI-SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS-SGKCLKTL-------KGHSN 108 (312)
T ss_dssp -------------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCEEEEE-------ECCSS
T ss_pred -------------------cchhh-ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC-CCcEEEEE-------cCCCC
Confidence 22234 6899999999999999999999 99999999998 45555544 67999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.|.+++|+|++ .+|++++.|+.|++||+++++.. ..+.. |...|.+++|+|++++|++++.
T Consensus 109 ~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~----~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 109 YVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCL----KTLPA-------------HSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp CEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEE----EEECC-------------CSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEE----EEecC-------------CCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999 99999999999999999886543 33333 4778999999999999999876
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
+.|++||+++ ++.+..+..+... .+..++|+|++++|++++.||.|++||+.++ .....+.+|.
T Consensus 171 ~~i~~wd~~~-~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~ 234 (312)
T 4ery_A 171 GLCRIWDTAS-GQCLKTLIDDDNP--------------PVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKTYTGHK 234 (312)
T ss_dssp SCEEEEETTT-CCEEEEECCSSCC--------------CEEEEEECTTSSEEEEEETTTEEEEEETTTT-EEEEEECSSC
T ss_pred CcEEEEECCC-CceeeEEeccCCC--------------ceEEEEECCCCCEEEEEcCCCeEEEEECCCC-cEEEEEEecC
Confidence 9999999986 6666555432221 1268999999999999999999999999987 6677788887
Q ss_pred CCcccee--eecCCcccccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEec---CCceEEE
Q 014644 348 NENRKPI--LQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACAN---GNSLFFH 419 (421)
Q Consensus 348 ~~~~~~~--~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~---~~~~~i~ 419 (421)
.....+. +.+. . ..+|++|+.|+. ++| ..++......+|...|.+++|+|++++|++++ ++.+++|
T Consensus 235 ~~~~~~~~~~~~~--~----~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 235 NEKYCIFANFSVT--G----GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp CSSSCCCEEEECS--S----SCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEEeC--C----CcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 7655443 3322 1 238999999999 999 44555666778999999999999999999886 6679999
Q ss_pred eC
Q 014644 420 YA 421 (421)
Q Consensus 420 ~~ 421 (421)
+.
T Consensus 309 ~~ 310 (312)
T 4ery_A 309 KS 310 (312)
T ss_dssp EC
T ss_pred cC
Confidence 74
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.6e-41 Score=304.70 Aligned_cols=290 Identities=11% Similarity=0.110 Sum_probs=219.5
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeC------CCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCce
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTN------DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 103 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~------d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 103 (421)
..|+..|++|+| +|||++||+|+. |++|++|+..++....
T Consensus 39 ~~H~~~V~~v~f--SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~-------------------------------- 84 (357)
T 4g56_B 39 ACMEVQIGAVRY--RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE-------------------------------- 84 (357)
T ss_dssp -CCCSEEEEEEE--CSSSCEEEEEECSSSSSCCEEEEEESSCC---CG--------------------------------
T ss_pred ccccCCEEEEEE--CCCCCEEEEEcCCCCccccCeEEEEECCCCCcce--------------------------------
Confidence 469999999999 799999999998 5667777665543100
Q ss_pred eeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCC
Q 014644 104 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
...... .+|...|.+++|+|++++|+++.|++|+|||+.+ ++..... ....
T Consensus 85 ------------------------~~~~~~-~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~-~~~~~~~---~~~~ 135 (357)
T 4g56_B 85 ------------------------SLCTAG-VQTEAGVTDVAWVSEKGILVASDSGAVELWEILE-KESLLVN---KFAK 135 (357)
T ss_dssp ------------------------GGCSEE-EECSSCEEEEEEETTTEEEEEETTSCEEEC---------CCC---CEEE
T ss_pred ------------------------eEeccc-CCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccc-cceeEEE---eecc
Confidence 111112 4788899999999999777666999999999984 3322211 0122
Q ss_pred CccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EE
Q 014644 184 DDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HL 262 (421)
Q Consensus 184 ~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 262 (421)
.+|...|.+++|+|++ ++|++++.|++|++||+++++.. ..+.. |...|.+++|+|++. ++
T Consensus 136 ~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~----~~~~~-------------h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVL----KSYNA-------------HSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp CCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCEEEEEECTTCSSCE
T ss_pred CCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEE----EEEcC-------------CCCCEEEEEEccCCCcee
Confidence 5799999999999999 99999999999999999987643 33344 478999999999875 66
Q ss_pred EEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC-CCEEEEeeCCCeEEEEecCCCCCce
Q 014644 263 LSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD-GLHFATGSYSNLLRIFSHGVGSAGG 340 (421)
Q Consensus 263 ~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~ 340 (421)
++++. +.|++||+++ +++...+..+.... .+.+++|+|+ +.+|++|+.|+.|++||++++ ...
T Consensus 198 ~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~-------------~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~-~~~ 262 (357)
T 4g56_B 198 LSCGEDGRILLWDTRK-PKPATRIDFCASDT-------------IPTSVTWHPEKDDTFACGDETGNVSLVNIKNP-DSA 262 (357)
T ss_dssp EEEETTSCEEECCTTS-SSCBCBCCCTTCCS-------------CEEEEEECTTSTTEEEEEESSSCEEEEESSCG-GGC
T ss_pred eeeccCCceEEEECCC-Cceeeeeeeccccc-------------cccchhhhhcccceEEEeecccceeEEECCCC-cEe
Confidence 67654 9999999986 66555444322211 1268999997 578999999999999999987 678
Q ss_pred eEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC-CCccccccccccCeEEEEEcc-CCCeEEEec-CCce
Q 014644 341 ITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS-SGHHELSYNLSSKLLHLAWHP-TTNLIACAN-GNSL 416 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~-~~~~~~~~~~~~~v~~~~~sp-d~~~la~~~-~~~~ 416 (421)
..+.+|...+..++|+|+ +. .+|++|+.|+. ++|+. .+......+|...|++++|+| |+.+||+++ ++.|
T Consensus 263 ~~~~~~~~~v~~l~~sp~--~~----~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYH--SS----PFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp EEECCCSSCEEEEEECSS--SS----CCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EEEeccceeEEEEEEcCC--CC----CEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE
Confidence 889999999999999987 22 27899999999 99943 334455668999999999999 799999988 6679
Q ss_pred EEEeC
Q 014644 417 FFHYA 421 (421)
Q Consensus 417 ~i~~~ 421 (421)
++|+.
T Consensus 337 ~iW~~ 341 (357)
T 4g56_B 337 LHHHL 341 (357)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99974
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-39 Score=294.49 Aligned_cols=287 Identities=14% Similarity=0.144 Sum_probs=222.1
Q ss_pred ccccccEEEEEEEE----cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 30 LEIEEKINRVRWCA----APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 30 ~~h~~~V~~v~~~~----~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
.+|.+.|++++|.+ .+++.+|++|+.|++|++||+.+.+....
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~--------------------------------- 64 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY--------------------------------- 64 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB---------------------------------
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc---------------------------------
Confidence 37999999999822 23789999999999999999876431000
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 184 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 184 (421)
...+...+ .+|...|.+++|+|++.+|+++ .|++|++||++ .++.+..+ .
T Consensus 65 --------------------~~~~~~~l-~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~-~~~~~~~~-------~ 115 (343)
T 2xzm_R 65 --------------------FGIPHKAL-TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLR-TGTTYKRF-------V 115 (343)
T ss_dssp --------------------SEEEEEEE-CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETT-SSCEEEEE-------E
T ss_pred --------------------cccccchh-ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-CCcEEEEE-------c
Confidence 01344556 8999999999999999999999 99999999998 45555544 7
Q ss_pred ccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC-----
Q 014644 185 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG----- 259 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~----- 259 (421)
+|...|.+++|+|++ .+|++++.|++|++||+...... . ... ...|...+.+++|+|++
T Consensus 116 ~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~----~-~~~----------~~~~~~~v~~~~~~~~~~~~~~ 179 (343)
T 2xzm_R 116 GHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKF----S-SAE----------KENHSDWVSCVRYSPIMKSANK 179 (343)
T ss_dssp CCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEE----E-CCT----------TTSCSSCEEEEEECCCCCSCSC
T ss_pred CCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCcee----e-eec----------ccCCCceeeeeeeccccccccc
Confidence 899999999999999 99999999999999999743211 1 110 12347789999999987
Q ss_pred -----CEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 260 -----QHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 260 -----~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
.++++++. +.|++||.. .+....+.+|...+ .+++|+|+|++|++|+.||.|++||+
T Consensus 180 ~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v---------------~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 180 VQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNV---------------NHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCE---------------EEEEECTTSSEEEEEETTCEEEEEES
T ss_pred cCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccc---------------eEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 68888865 999999953 66677788887755 79999999999999999999999999
Q ss_pred CCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC--CCccc--c-----------ccccccCeE
Q 014644 334 GVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SGHHE--L-----------SYNLSSKLL 397 (421)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~--~-----------~~~~~~~v~ 397 (421)
.........+ .+...+..++|+|+ +. +++++ .|+. ++|+. ..... . ..+|...|.
T Consensus 243 ~~~~~~~~~~-~~~~~v~~v~~sp~--~~-----~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 313 (343)
T 2xzm_R 243 LNLTYPQREF-DAGSTINQIAFNPK--LQ-----WVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCT 313 (343)
T ss_dssp SCCSSCSEEE-ECSSCEEEEEECSS--SC-----EEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEE
T ss_pred CCCcccceee-cCCCcEEEEEECCC--CC-----EEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceE
Confidence 6543444443 34567999999988 33 66655 4555 99932 22111 1 125778899
Q ss_pred EEEEccCCCeEEEec-CCceEEEe
Q 014644 398 HLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 398 ~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
+++|+|++++||+|+ ++.+++|+
T Consensus 314 ~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 314 SLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp EEEECSSSCCEEEEETTSEEEEEE
T ss_pred EEEECCCCCeEEEecCCceEEEEE
Confidence 999999999999998 55699997
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.1e-39 Score=297.02 Aligned_cols=299 Identities=16% Similarity=0.197 Sum_probs=230.1
Q ss_pred ccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 26 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 26 ~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
..+.++|...|++++| +|++++||+|+ |+++++|++.+++.......+....
T Consensus 57 ~~~~~~h~~~V~~v~f--spdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~------------------------- 108 (393)
T 1erj_A 57 LHKSLDHTSVVCCVKF--SNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN------------------------- 108 (393)
T ss_dssp EEEEEECSSCCCEEEE--CTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------------------------------
T ss_pred eEEecCCCCEEEEEEE--CCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc-------------------------
Confidence 3455689999999999 79999999876 7899999999877332211100000
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 184 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 184 (421)
.+... ...... ..+...|++++|+|++++|++| .|++|++||+. .++....+ .
T Consensus 109 -------------~~~~~----~~~~~~-~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~-~~~~~~~~-------~ 162 (393)
T 1erj_A 109 -------------KDPEN----LNTSSS-PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE-NRKIVMIL-------Q 162 (393)
T ss_dssp ------------------------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEE-------C
T ss_pred -------------ccccc----cccccc-CCCceeEEEEEECCCCCEEEEEcCCCeEEEEECC-CCcEEEEE-------c
Confidence 00000 000001 2445569999999999999999 99999999998 55555544 7
Q ss_pred ccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEE
Q 014644 185 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLL 263 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 263 (421)
+|...|.+++|+|++ ..|++++.|++|++||+++++.. ..+.. ...+..++|+| ++++|+
T Consensus 163 ~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~----~~~~~--------------~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 163 GHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCS----LTLSI--------------EDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE----EEEEC--------------SSCEEEEEECSTTCCEEE
T ss_pred cCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeE----EEEEc--------------CCCcEEEEEECCCCCEEE
Confidence 899999999999999 99999999999999999987643 22222 45789999999 899999
Q ss_pred EecC-CeEEEEECCCCCcceeEE-------eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC
Q 014644 264 SRDY-MNLKLWDIRMDSTPVATF-------KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 264 ~~~~-~~i~i~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~ 335 (421)
+++. +.|++||+++ +..+..+ .+|...+ .+++|+|++++|++|+.||.|++||+++
T Consensus 224 ~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v---------------~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 224 AGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSV---------------YSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEETTSCEEEEETTT-CCEEEEEC------CCCSSCE---------------EEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCE---------------EEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 9876 9999999986 6666655 3344433 7999999999999999999999999986
Q ss_pred CC-----------CceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEE
Q 014644 336 GS-----------AGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAW 401 (421)
Q Consensus 336 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~ 401 (421)
.. .....+.+|...+..++++++ ..+|++|+.|+. ++| ..+..+....+|...|.+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-------~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN-------DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGG-------GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCC-------CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 42 234577899999999999988 348999999999 999 445566667789999999998
Q ss_pred cc------CCCeEEEec-CCceEEEe
Q 014644 402 HP------TTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 402 sp------d~~~la~~~-~~~~~i~~ 420 (421)
+| ++++||+|+ ++.++||+
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECc
Confidence 86 688999998 55699997
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-38 Score=309.25 Aligned_cols=315 Identities=18% Similarity=0.234 Sum_probs=258.7
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|...|.+++| +|++.+|++++.|+.|++||.....+..+. .+.. .+.++.+.++...+..++
T Consensus 218 ~~~~~~v~~~~~--s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~--~~~~------------~v~~v~~~~d~~~l~~~~ 281 (577)
T 2ymu_A 218 TGHSSSVRGVAF--SPDGQTIASASDDKTVKLWNRNGQLLQTLT--GHSS------------SVNGVAFRPDGQTIASAS 281 (577)
T ss_dssp ECCSSCEEEEEE--CTTSSCEEEEETTSCEEEECTTSCEEEEEC--CCSS------------CEEEEEECTTSSEEEEEE
T ss_pred ecCCCCEEEEEE--CCCCCEEEEEeCCCEEEEEeCCCCEEEEEe--cCCC------------CEEEEEEcCCCCEEEEEe
Confidence 368899999999 799999999999999999997654443332 2334 444555566666666665
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
. ++.+++|+... ++++.+ .+|...|.+++|+|+++.|+++ .|++|++||.. .. ....+ .+|..
T Consensus 282 ~--d~~i~~w~~~~----~~~~~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~-~~~~~-------~~~~~ 345 (577)
T 2ymu_A 282 D--DKTVKLWNRNG----QLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQ-HLQTL-------TGHSS 345 (577)
T ss_dssp T--TSCEEEEETTS----CEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SC-EEEEE-------CCCSS
T ss_pred C--CCEEEEEeCCC----cEEEEE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CC-eeEEE-------eCCCC
Confidence 4 56789998643 566777 8999999999999999999999 99999999987 33 33333 67889
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.+.+++|+|++ ..|++++.|+.|++||... +.. ..+. .|...|.+++|+|+|++|++++.
T Consensus 346 ~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~~-~~~----~~~~-------------~~~~~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 346 SVWGVAFSPDG-QTIASASDDKTVKLWNRNG-QLL----QTLT-------------GHSSSVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp CEEEEEECTTS-SEEEEEETTSEEEEEETTC-CEE----EEEE-------------CCSSCEEEEEECTTSSCEEEEETT
T ss_pred CEEEEEECCCC-CEEEEEeCCCEEEEEcCCC-CEE----EEec-------------CCCCCeEEEEECCCCCEEEEEeCC
Confidence 99999999999 9999999999999999643 221 2233 34789999999999999999876
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
+.|++||.. ++.+..+.+|...+ .+++|+|++++|++++.|+.|++||+. ......+.+|.
T Consensus 407 ~~v~~~~~~--~~~~~~~~~~~~~v---------------~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~ 467 (577)
T 2ymu_A 407 KTVKLWNRN--GQLLQTLTGHSSSV---------------WGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTGHS 467 (577)
T ss_dssp SEEEEECTT--CCEEEEEECCSSCE---------------EEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEECCS
T ss_pred CEEEEEeCC--CCEEEEecCCCCCe---------------EEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcCCC
Confidence 999999964 67788888888755 799999999999999999999999975 36778899999
Q ss_pred CCccceeeecCCcccccccceeeeecccCc-ccC-CCCCccccccccccCeEEEEEccCCCeEEEecC-CceEEEeC
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN-SSSGHHELSYNLSSKLLHLAWHPTTNLIACANG-NSLFFHYA 421 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw-~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~-~~~~i~~~ 421 (421)
.++..++|+|+ + .+|++++.|+. ++| ..++.+....+|...|++++|+||+++||+++. +.+++|+.
T Consensus 468 ~~v~~~~~spd--~-----~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 468 SSVRGVAFSPD--G-----QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp SCEEEEEECTT--S-----CEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCEEEEEEcCC--C-----CEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 99999999998 3 38999999999 999 444556667789999999999999999999985 56999973
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-39 Score=290.48 Aligned_cols=284 Identities=14% Similarity=0.144 Sum_probs=214.2
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|++.|.+++| +++ +|++|+.|++|+|||+..+..
T Consensus 12 ~h~~~v~~~~~--s~~--~las~~~D~~i~lw~~~~~~~----------------------------------------- 46 (330)
T 2hes_X 12 LYKEKIWSFDF--SQG--ILATGSTDRKIKLVSVKYDDF----------------------------------------- 46 (330)
T ss_dssp CCSSCEEEEEE--ETT--EEEEEESSSCEEEEECSSSCC-----------------------------------------
T ss_pred cCCCceeeecc--CCC--EEEEEcCCCEEEEEEecCCCe-----------------------------------------
Confidence 68999999999 455 999999999999999976431
Q ss_pred ccccceeEEeecccceeeeeeeec-CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC------ceeeeeeecCCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYP-HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS------DQCFNIVDMKPSN 182 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~------~~~~~~~~~~~~~ 182 (421)
.....+. .+|...|.+++|+|++++|+++ .|++|++||+... .+....
T Consensus 47 -----------------~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~------- 102 (330)
T 2hes_X 47 -----------------TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI------- 102 (330)
T ss_dssp -----------------EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEE-------
T ss_pred -----------------EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEE-------
Confidence 1111121 3499999999999999999999 9999999998521 122332
Q ss_pred CCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 183 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 183 ~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
+.+|...|.+++|+|++ ++|++++.|++|++||++......+....+ .+|...|.+++|+|++.+|
T Consensus 103 ~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~-------------~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVL-------------QEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp EC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEE-------------CCCSSCEEEEEECSSSSEE
T ss_pred EcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEe-------------ccCCCceEEEEECCCCCEE
Confidence 37899999999999999 999999999999999996432111111223 3458899999999999999
Q ss_pred EEecC-CeEEEEECCCCC--cceeEEeeccCcccccccccCCCcceeeeEEEEcCC--CCEEEEeeCCCeEEEEecCCCC
Q 014644 263 LSRDY-MNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD--GLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 263 ~~~~~-~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
++++. ++|++||... + +++..+.+|...+ .+++|+|+ +.+|++|+.|++|++||+..+.
T Consensus 169 ~s~s~D~~i~iW~~~~-~~~~~~~~~~~h~~~v---------------~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 169 ASSSYDDTVRIWKDYD-DDWECVAVLNGHEGTV---------------WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDD 232 (330)
T ss_dssp EEEETTSCEEEEEEET-TEEEEEEEECCCSSCE---------------EEEEECCSSSSCEEEEEETTSCEEEEEEEEEC
T ss_pred EEEcCCCeEEEEECCC-CCeeEEEEccCCCCcE---------------EEEEecCCCCeeEEEEEeCCCeEEEEEecCCC
Confidence 99876 9999999875 4 5677888888765 79999998 7789999999999999987542
Q ss_pred -------CceeEEec-CCCCccceeeecCCcccccccceeeeecccCc-ccCCCCC----ccc-ccccccc-CeEEEEEc
Q 014644 338 -------AGGITVEA-GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG----HHE-LSYNLSS-KLLHLAWH 402 (421)
Q Consensus 338 -------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~----~~~-~~~~~~~-~v~~~~~s 402 (421)
.....+.. |...+..++|++. ..|++++.|+. ++|+... ... ...+|.. .|.+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--------~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~ 304 (330)
T 2hes_X 233 EDDQQEWVCEAILPDVHKRQVYNVAWGFN--------GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWL 304 (330)
T ss_dssp TTSCEEEEEEEECCSCCSSCEEEEEECTT--------SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC
T ss_pred ccccceeEEeeecccccccceEEEEEcCC--------CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEe
Confidence 12333444 8999999999854 27999999999 9994321 111 2346766 89999999
Q ss_pred c--CCCeEEEec-CCceEEEeC
Q 014644 403 P--TTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 403 p--d~~~la~~~-~~~~~i~~~ 421 (421)
| ++++||+|+ ++.++||+.
T Consensus 305 ~~~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 305 ELNGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp -----CCEEEEETTSEEEEEEC
T ss_pred cCCCceEEEEecCCCcEEEEEe
Confidence 9 789999998 556999974
No 20
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-40 Score=304.31 Aligned_cols=338 Identities=12% Similarity=0.141 Sum_probs=258.3
Q ss_pred cccccccEEEEEEEEcCCCC-eEEEE----------eCCCcEEEeecCCcee-EEeeecCCCCCcccccccccccceeec
Q 014644 29 SLEIEEKINRVRWCAAPNGS-MFILS----------TNDKTIKLWKVRDQKV-KKIKEMDHFPFVSSENTLLAEKNFMNE 96 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~~~-~l~t~----------s~d~~v~lwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~ 96 (421)
.+.+.++|.+++| +|++. +|+++ +.|++|+|||+.+++. +.+....+.. .+.++
T Consensus 8 ~l~~~~~v~~~~~--sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~------------~v~~~ 73 (416)
T 2pm9_A 8 KLAEFSRTATFAW--SHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDS------------KFNDL 73 (416)
T ss_dssp --CEEEESCBCCB--CSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSS------------CEEEE
T ss_pred hHhhhhhcceEee--CCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCC------------ceEEE
Confidence 4456678999999 78876 99999 8999999999988752 2333333444 45555
Q ss_pred cCCCCceeeeecccccccceeEEeeccccee-eeeeeecCCCCcceEEEeecCC-CCEEEEE-cCCcEEEEeCCCCc---
Q 014644 97 HNPPSFAHGYHLEWTENMATKIANVGNSVHA-RCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISD--- 170 (421)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~-~d~~i~lwd~~~~~--- 170 (421)
.++++..+++.++. ++.+++|++...... +++..+ .+|...|.+++|+|+ +++|+++ .|++|++||+....
T Consensus 74 ~~s~~~~~l~~~~~--dg~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 150 (416)
T 2pm9_A 74 DWSHNNKIIAGALD--NGSLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESP 150 (416)
T ss_dssp EECSSSSCEEEEES--SSCEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCT
T ss_pred EECCCCCeEEEEcc--CCeEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 66667777777655 568999999873222 466777 899999999999998 8999999 99999999998443
Q ss_pred ---eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccc
Q 014644 171 ---QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 247 (421)
Q Consensus 171 ---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 247 (421)
..... .....|...|.+++|+|++..+|++++.|+.|++||+++++.. ..+..|. ...+|.
T Consensus 151 ~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~----~~~~~~~-------~~~~~~ 214 (416)
T 2pm9_A 151 SNYTPLTP-----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV----IHLSYTS-------PNSGIK 214 (416)
T ss_dssp TTCCCBCC-----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE----EEECCCC-------CSSCCC
T ss_pred cccccccc-----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc----eEEeccc-------cccccC
Confidence 22111 2346789999999999994489999999999999999987643 2222210 012236
Q ss_pred cceeEEEEcCCC-CEEEEecC-C---eEEEEECCCCCcceeEEe-eccCcccccccccCCCcceeeeEEEEcC-CCCEEE
Q 014644 248 ASISDIKFANDG-QHLLSRDY-M---NLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFA 320 (421)
Q Consensus 248 ~~v~~~~~s~~~-~~l~~~~~-~---~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~ 320 (421)
..+.+++|+|++ .++++++. + .|++||+++...++..+. +|...+ .+++|+| ++++|+
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGI---------------LSLDWCHQDEHLLL 279 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCE---------------EEEEECSSCSSCEE
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCce---------------eEEEeCCCCCCeEE
Confidence 789999999997 57888765 7 999999987446677776 676654 7999999 899999
Q ss_pred EeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCCc--cccc--------
Q 014644 321 TGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGH--HELS-------- 389 (421)
Q Consensus 321 ~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~--~~~~-------- 389 (421)
+++.||.|++||+.++ .....+.+|...+..++|+|+ +. ..|++++.|+. ++|+.... ....
T Consensus 280 s~~~dg~v~~wd~~~~-~~~~~~~~~~~~v~~~~~s~~--~~----~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 352 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESA-EQLSQFPARGNWCFKTKFAPE--AP----DLFACASFDNKIEVQTLQNLTNTLDEQETETKQQ 352 (416)
T ss_dssp EEESSSEEEEECSSSC-CEEEEEECSSSCCCCEEECTT--CT----TEEEECCSSSEEEEEESCCCCCSSCC--------
T ss_pred EEeCCCCEEEeeCCCC-ccceeecCCCCceEEEEECCC--CC----CEEEEEecCCcEEEEEccCCCCCccccccccccc
Confidence 9999999999999987 778889999999999999998 21 38999999999 99932211 1110
Q ss_pred ---------------------------cccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 390 ---------------------------YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 390 ---------------------------~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
..+...+..++|+|||++||+++ ++.++||+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 353 ESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp --------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred CCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 11567788999999999999999 556999974
No 21
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-38 Score=292.73 Aligned_cols=334 Identities=13% Similarity=0.058 Sum_probs=256.5
Q ss_pred ccccccccccccEEEEEEEEcCCCC-eEEEEeCCCcEEEeec----CCcee------EEeeecCCCCCcccccccccccc
Q 014644 24 FDYLKSLEIEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKV----RDQKV------KKIKEMDHFPFVSSENTLLAEKN 92 (421)
Q Consensus 24 ~~~~~~~~h~~~V~~v~~~~~~~~~-~l~t~s~d~~v~lwd~----~~~~~------~~~~~~~~~~~v~~~~~~~~~~~ 92 (421)
...+....|.+.|++++| +|++. +|++|+.|+.|++||+ .+++. ........... .........
T Consensus 36 ~~~~~~~~~~~~v~~~~~--s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 110 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTW--NPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALS---ASSGKTTNQ 110 (425)
T ss_dssp CEECEEEEECSCCSEEEE--CSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC---------CBC
T ss_pred hhheeeeeccCceEEEEE--CCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccc---ccccCCCCc
Confidence 344555677899999999 78898 9999999999999999 77651 11111100000 000011235
Q ss_pred eeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCce
Q 014644 93 FMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ 171 (421)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~ 171 (421)
+.++.+++++.+++.++. ++.+++|+ ... +.+..+ .+|...|.+++|+|++++|+++ .|+.|++||+. .++
T Consensus 111 v~~~~~s~~~~~l~~~~~--dg~i~i~~-~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~ 182 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVE--NGELRLWN-KTG---ALLNVL-NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI-SGT 182 (425)
T ss_dssp EEEEEECTTSSEEEEEET--TSCEEEEE-TTS---CEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT-TTE
T ss_pred eEEEEEcCCCCEEEEEeC--CCeEEEEe-CCC---Ceeeec-cCCCccEEEEEECCCCCEEEEEecCCeEEEEECC-CCc
Confidence 667777777777777765 56899998 333 677777 8999999999999999999998 99999999998 555
Q ss_pred eeeeeecCCCCCCccCCC---------------eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhcccccc
Q 014644 172 CFNIVDMKPSNMDDLTEV---------------ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAES 236 (421)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~---------------v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~ 236 (421)
....+ ..+... +.+++|+|++ .+++++.|+.|++||++.+... ..+..
T Consensus 183 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~----~~~~~---- 245 (425)
T 1r5m_A 183 VMQHF-------ELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPT----GKLIG---- 245 (425)
T ss_dssp EEEEE-------CCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCS----EEECC----
T ss_pred EEEEe-------eccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCcee----eeecc----
Confidence 55544 233333 8999999985 6889999999999999986533 23333
Q ss_pred CCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC
Q 014644 237 HGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 315 (421)
Q Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 315 (421)
|...|.+++|+|++++|++++. +.|++||+++ ++.+..+..|...+ .+++|+|+
T Consensus 246 ---------~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i---------------~~~~~~~~ 300 (425)
T 1r5m_A 246 ---------HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSI---------------VSASWVGD 300 (425)
T ss_dssp ---------CSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECCCSSCE---------------EEEEEETT
T ss_pred ---------CCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecCCCccE---------------EEEEECCC
Confidence 4788999999999999999875 9999999986 77788887777654 79999999
Q ss_pred CCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC--C--------
Q 014644 316 GLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS--G-------- 384 (421)
Q Consensus 316 ~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~--~-------- 384 (421)
+ ++++++.||.|++||+.++ .....+..|..++..+.|+|+ ...|++++.|+. ++|+.. .
T Consensus 301 ~-~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~i~~~~~s~~-------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 371 (425)
T 1r5m_A 301 D-KVISCSMDGSVRLWSLKQN-TLLALSIVDGVPIFAGRISQD-------GQKYAVAFMDGQVNVYDLKKLNSKSRSLYG 371 (425)
T ss_dssp T-EEEEEETTSEEEEEETTTT-EEEEEEECTTCCEEEEEECTT-------SSEEEEEETTSCEEEEECHHHHC-------
T ss_pred C-EEEEEeCCCcEEEEECCCC-cEeEecccCCccEEEEEEcCC-------CCEEEEEECCCeEEEEECCCCccceeeeec
Confidence 9 9999999999999999987 677888899999999999998 338999999999 999332 2
Q ss_pred ------------cccccccccc--CeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 385 ------------HHELSYNLSS--KLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 385 ------------~~~~~~~~~~--~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
.+.....+.. .|.+++|+|++++|++++ ++.+++|+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 372 NRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp -------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEEC
T ss_pred ccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEee
Confidence 3445556755 999999999999999888 556999974
No 22
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.7e-38 Score=290.62 Aligned_cols=329 Identities=9% Similarity=0.053 Sum_probs=248.8
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccc
Q 014644 34 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 113 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 113 (421)
..+++++| +|++++|++++.|++|++||+.+++...... .+. ......++++...++.++. +
T Consensus 57 ~~~~~~~~--s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~--~~~------------~~~~~~~~~~~~~l~~~~~--d 118 (420)
T 3vl1_A 57 DAGKGNTF--EKVGSHLYKARLDGHDFLFNTIIRDGSKMLK--RAD------------YTAVDTAKLQMRRFILGTT--E 118 (420)
T ss_dssp BCCTTCEE--EEEETTEEEEEETTEEEEEECCSEETTTTSC--SCC------------EEEEEEECSSSCEEEEEET--T
T ss_pred ccccceee--eecCCeEEEEEcCCcEEEEEecccceeeEEe--cCC------------ceEEEEEecCCCEEEEEEC--C
Confidence 34558899 6889999999999999999998765221111 111 2223345566677777765 5
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeE
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 192 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (421)
+.+++|++... ++...+ .+|...|++++|+|++++|+++ .|++|++||++ .++....+ .+|...|.+
T Consensus 119 g~i~iwd~~~~---~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~-------~~h~~~v~~ 186 (420)
T 3vl1_A 119 GDIKVLDSNFN---LQREID-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK-DGSNPRTL-------IGHRATVTD 186 (420)
T ss_dssp SCEEEECTTSC---EEEEET-TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TCCCCEEE-------ECCSSCEEE
T ss_pred CCEEEEeCCCc---ceeeec-ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC-CCcCceEE-------cCCCCcEEE
Confidence 68999998876 777776 8999999999999999999999 99999999998 45555443 679999999
Q ss_pred EEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccC-----------CCcccccccccceeEEEEcCCCCE
Q 014644 193 AEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH-----------GSKSFFTEIIASISDIKFANDGQH 261 (421)
Q Consensus 193 ~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~ 261 (421)
++|+|++ .+|++++.|+.|++||+++++.. ..+..|.... ........+...+.+++|+|++++
T Consensus 187 ~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 187 IAIIDRG-RNVLSASLDGTIRLWECGTGTTI----HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp EEEETTT-TEEEEEETTSCEEEEETTTTEEE----EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred EEEcCCC-CEEEEEcCCCcEEEeECCCCcee----EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 9999999 99999999999999999987644 2232211000 001112234567788888999999
Q ss_pred EEEecC-CeEEEEECCCCCcceeEEe-eccCcccccccccCCCcceeeeEEEEcCCCC-EEEEeeCCCeEEEEecCCCCC
Q 014644 262 LLSRDY-MNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 262 l~~~~~-~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s~dg~i~iwd~~~~~~ 338 (421)
|++++. +.|++||+++ ++....+. .|...+ .+++|+|+++ +|++|+.||.|++||++++..
T Consensus 262 l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v---------------~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFS-KEQTIQLPSKFTCSC---------------NSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EEEEETTSCEEEEETTT-CCEEEEECCTTSSCE---------------EEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EEEEcCCCeEEEEECCC-CceeEEcccccCCCc---------------eeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 999876 9999999987 55555543 344433 7999999998 999999999999999998866
Q ss_pred ceeEEec-CCCCccceeeecCCcccccccceeeeecccCc-ccCCCC-----------CccccccccccCeEEEEEccCC
Q 014644 339 GGITVEA-GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS-----------GHHELSYNLSSKLLHLAWHPTT 405 (421)
Q Consensus 339 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-----------~~~~~~~~~~~~v~~~~~spd~ 405 (421)
....+.+ |...+..+.+. + + ..|++++.|+. ++|+.. ........+...|.+++|+|++
T Consensus 326 ~~~~~~~~~~~~v~~~~~~-~--~-----~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 397 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYFA-A--G-----ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDD 397 (420)
T ss_dssp CSEEEEESTTSCEEEEEEE-T--T-----EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred chhhhhccCCCCceEEEeC-C--C-----CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCC
Confidence 5677776 66677777554 4 2 38999999999 999322 1122344677899999999999
Q ss_pred C----eEEEecCCceEEEeC
Q 014644 406 N----LIACANGNSLFFHYA 421 (421)
Q Consensus 406 ~----~la~~~~~~~~i~~~ 421 (421)
+ ++++|+.+.+.+|+.
T Consensus 398 ~~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 398 ESNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp SSSCEEEEEETTTEEEEEES
T ss_pred CCcceEEEEcCCceEEEEec
Confidence 9 777888888999974
No 23
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=280.40 Aligned_cols=246 Identities=14% Similarity=0.158 Sum_probs=199.2
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
..|+..|++++| +++ ..|++|+.||+|+|||+++++....
T Consensus 79 ~~~~~~v~~~~~--s~d-~~l~~~s~dg~v~lWd~~~~~~~~~------------------------------------- 118 (344)
T 4gqb_B 79 VQTEAGVADLTW--VGE-RGILVASDSGAVELWELDENETLIV------------------------------------- 118 (344)
T ss_dssp EEESSCEEEEEE--ETT-TEEEEEETTSEEEEEEECTTSSCEE-------------------------------------
T ss_pred eccCCCEEEEEE--eCC-CeEEEEECCCEEEEEeccCCCceeE-------------------------------------
Confidence 456778999999 465 5788999999999999988651111
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
....+ .+|.+.|++++|+|++++|++| .|++|++||++ .++++..+ .+|..
T Consensus 119 -------------------~~~~~-~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~-~~~~~~~~-------~~h~~ 170 (344)
T 4gqb_B 119 -------------------SKFCK-YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA-QQVVLSSY-------RAHAA 170 (344)
T ss_dssp -------------------EEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEE-------CCCSS
T ss_pred -------------------eeccc-cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEE-------cCcCC
Confidence 11112 5899999999999999999999 99999999998 56666654 78999
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC-CCEEEEecC
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND-GQHLLSRDY 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~ 267 (421)
.|.+++|+|++..+|++++.|++|++||+++++.. ..+.. ..+...+.+++|+|+ +++|++|+.
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~----~~~~~-----------~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA----SQIGC-----------SAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE----EECC---------------CCCEEEEEECSSCTTEEEEEET
T ss_pred ceEEEEecCCCCCceeeecccccccccccccccee----eeeec-----------ceeeccceeeeecCCCCcceEEecc
Confidence 99999999998668899999999999999987643 22221 122457899999995 567888865
Q ss_pred -CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEEeeCCCeEEEEecCCCCCceeEEec
Q 014644 268 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGSYSNLLRIFSHGVGSAGGITVEA 345 (421)
Q Consensus 268 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~~~ 345 (421)
+.|++||+++ ++++..+.+|...+ .+++|+|++ ++|++|+.|++|+|||+.++ ....+.+
T Consensus 236 dg~v~~wd~~~-~~~~~~~~~h~~~v---------------~~v~fsp~g~~~lasgs~D~~i~vwd~~~~--~~~~~~~ 297 (344)
T 4gqb_B 236 NGTVSLVDTKS-TSCVLSSAVHSQCV---------------TGLVFSPHSVPFLASLSEDCSLAVLDSSLS--ELFRSQA 297 (344)
T ss_dssp TSEEEEEESCC---CCEEEECCSSCE---------------EEEEECSSSSCCEEEEETTSCEEEECTTCC--EEEEECC
T ss_pred CCcEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEccCCCeEEEEEeCCCeEEEEECCCC--cEEEEcC
Confidence 9999999997 88899999998865 899999997 57999999999999999876 3456889
Q ss_pred CCCCccceeeecCCcccccccceeeeecccCc-ccCCC
Q 014644 346 GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
|.+.|.+++|+|+ +. .+|++++.|+. ++|..
T Consensus 298 H~~~V~~v~~sp~--~~----~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 298 HRDFVRDATWSPL--NH----SLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp CSSCEEEEEECSS--ST----TEEEEEETTSCEEEEEC
T ss_pred CCCCEEEEEEeCC--CC----eEEEEEcCCCeEEEEEC
Confidence 9999999999998 32 26789999999 99943
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-37 Score=276.72 Aligned_cols=247 Identities=15% Similarity=0.158 Sum_probs=208.8
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
+..+++ .+|.+.|++++|+|++++|+++ .|++|++||+. .+.....+ ..|..+|.+++|+|++ ++|+++
T Consensus 4 ~~~~~~-~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~-~~~~~~~~-------~~~~~~v~~~~~~~~~-~~l~s~ 73 (304)
T 2ynn_A 4 DIKKTF-SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE-TQVEVRSI-------QVTETPVRAGKFIARK-NWIIVG 73 (304)
T ss_dssp CCEEEE-EEECSCEEEEEECSSSSEEEEEETTSEEEEEETT-TTEEEEEE-------ECCSSCEEEEEEEGGG-TEEEEE
T ss_pred eeEEee-cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC-CCceeEEe-------eccCCcEEEEEEeCCC-CEEEEE
Confidence 455667 8999999999999999999999 99999999998 55555544 6788999999999999 999999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
+.|++|++||+.+++.. ..+.. |...|.+++|+|++++|++++. ++|++||+++.......+
T Consensus 74 s~d~~i~vwd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 74 SDDFRIRVFNYNTGEKV----VDFEA-------------HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp ETTSEEEEEETTTCCEE----EEEEC-------------CSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEECCCCcEE----EEEeC-------------CCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 99999999999987643 33444 4889999999999999999876 999999998634566778
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCccccc
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRS 364 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (421)
.+|...+ .+++|+| ++.+|++|+.|+.|++||+.+.........+|...+..+.+.+...+.
T Consensus 137 ~~h~~~v---------------~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-- 199 (304)
T 2ynn_A 137 EGHEHFV---------------MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-- 199 (304)
T ss_dssp CCCCSCE---------------EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC--
T ss_pred cccCCcE---------------EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC--
Confidence 8888765 7999999 688999999999999999988755555556777888888888753333
Q ss_pred ccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 365 SLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 365 ~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
+|++|+.|+. ++| ..+..+....+|...|..++|+|++++|++|+ ++.+++|+.
T Consensus 200 ---~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 200 ---YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp ---EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred ---EEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 8999999999 999 34455667778999999999999999999999 556999974
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-36 Score=274.79 Aligned_cols=326 Identities=13% Similarity=0.113 Sum_probs=254.1
Q ss_pred ccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 26 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 26 ~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
++...-|.++|.+++| +|++++++++..++.+.+|...... .......|.+.|. ++.++++..++
T Consensus 2 ~~~~~~~~~~v~~~~~--s~dg~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~------------~~~~~~~~~~l 66 (337)
T 1gxr_A 2 YFQGAMGSKPAYSFHV--TADGQMQPVPFPPDALIGPGIPRHA-RQINTLNHGEVVC------------AVTISNPTRHV 66 (337)
T ss_dssp CEEEEEEEEECCEEEE--CSSSCEEECCCCTTSSSSTTCCSEE-EEEEEECCSSCCC------------EEEECSSSSEE
T ss_pred cccccccCCceeEEEE--CCCCCEEEeecCCCcEeccccCCcc-ccceeccCCCceE------------EEEEecCCcEE
Confidence 3444456789999999 7999999999988888888765543 2333335656444 44455566666
Q ss_pred eecccccccceeEEeecccceeeeeeeec-CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCce-eeeeeecCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYP-HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ-CFNIVDMKPSN 182 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~-~~~~~~~~~~~ 182 (421)
+.++ ++.+++|+............+. .+|...|.+++|+|++++|+++ .|+.|++||++.... ... .
T Consensus 67 ~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-------~ 136 (337)
T 1gxr_A 67 YTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA-------E 136 (337)
T ss_dssp EEEC---BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE-------E
T ss_pred EEcC---CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee-------e
Confidence 6665 5689999998764333444431 2789999999999999999999 999999999984332 222 2
Q ss_pred CCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 183 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 183 ~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
+..|...|.+++|+|++ ++|++++.|+.|++||+++++.. ..+.. |...+.+++|+|++++|
T Consensus 137 ~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~----~~~~~-------------~~~~i~~~~~~~~~~~l 198 (337)
T 1gxr_A 137 LTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLV----RQFQG-------------HTDGASCIDISNDGTKL 198 (337)
T ss_dssp EECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCEEEEEECTTSSEE
T ss_pred cccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCcee----eeeec-------------ccCceEEEEECCCCCEE
Confidence 36788899999999998 99999999999999999986543 33333 47789999999999999
Q ss_pred EEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCcee
Q 014644 263 LSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGI 341 (421)
Q Consensus 263 ~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 341 (421)
++++. +.|++||+++ ++.+..+. +...+ .+++|+|++++|++++.+|.|++||+.+. ...
T Consensus 199 ~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v---------------~~~~~s~~~~~l~~~~~~~~i~~~~~~~~--~~~ 259 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLRE-GRQLQQHD-FTSQI---------------FSLGYCPTGEWLAVGMESSNVEVLHVNKP--DKY 259 (337)
T ss_dssp EEEETTSEEEEEETTT-TEEEEEEE-CSSCE---------------EEEEECTTSSEEEEEETTSCEEEEETTSS--CEE
T ss_pred EEEecCCcEEEEECCC-CceEeeec-CCCce---------------EEEEECCCCCEEEEEcCCCcEEEEECCCC--CeE
Confidence 99876 9999999986 77666654 33322 78999999999999999999999999876 345
Q ss_pred EEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC-CCccccccccccCeEEEEEccCCCeEEEec-CCceEE
Q 014644 342 TVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS-SGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFF 418 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~-~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i 418 (421)
.+..|..++..+.|+|+ + ..|++++.|+. ++|+. .+.......+...|.+++|+|++++|++++ ++.+++
T Consensus 260 ~~~~~~~~v~~~~~~~~--~-----~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 332 (337)
T 1gxr_A 260 QLHLHESCVLSLKFAYC--G-----KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATV 332 (337)
T ss_dssp EECCCSSCEEEEEECTT--S-----SEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred EEcCCccceeEEEECCC--C-----CEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEE
Confidence 78899999999999998 3 38999999999 99933 223334456788999999999999999988 556999
Q ss_pred Ee
Q 014644 419 HY 420 (421)
Q Consensus 419 ~~ 420 (421)
|+
T Consensus 333 w~ 334 (337)
T 1gxr_A 333 YE 334 (337)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 26
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-36 Score=275.40 Aligned_cols=294 Identities=14% Similarity=0.142 Sum_probs=236.1
Q ss_pred ccccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCce
Q 014644 24 FDYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 103 (421)
Q Consensus 24 ~~~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 103 (421)
+..+.-.+|.+.|++++| ++++++|++++.||.|++||+.+++
T Consensus 23 ~~~~~l~~h~~~v~~~~~--s~~~~~l~~~~~dg~i~vwd~~~~~----------------------------------- 65 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKY--NKEGDLLFSCSKDSSASVWYSLNGE----------------------------------- 65 (369)
T ss_dssp EEEEEEECCSSCEEEEEE--CTTSCEEEEEESSSCEEEEETTTCC-----------------------------------
T ss_pred cccEEEEEeeceEEEEEE--cCCCCEEEEEeCCCEEEEEeCCCch-----------------------------------
Confidence 344555689999999999 7899999999999999999988753
Q ss_pred eeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCC
Q 014644 104 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN 182 (421)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~ 182 (421)
++..+ .+|...|.+++|+|++++|+++ .|+.|++||+. .++....+
T Consensus 66 -------------------------~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~------ 112 (369)
T 3zwl_B 66 -------------------------RLGTL-DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS-NGQCVATW------ 112 (369)
T ss_dssp -------------------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-TCCEEEEE------
T ss_pred -------------------------hhhhh-hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCcEEEEe------
Confidence 22334 6899999999999999999999 99999999998 55555544
Q ss_pred CCccCCCeeEEEEecCCCCeEEEEEcC-----CeEEEEECCcccccccchhhhccccccCCCccccccccc--ceeEEEE
Q 014644 183 MDDLTEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA--SISDIKF 255 (421)
Q Consensus 183 ~~~~~~~v~~~~~~p~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~v~~~~~ 255 (421)
. +...+.+++|+|++ ..+++++.+ +.|++||+....... .+.. ........+..|.. .+.+++|
T Consensus 113 -~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 113 -K-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATH----ELTK--VSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp -E-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTC----CEEE--ECSSCSEEEECCTTCCCEEEEEE
T ss_pred -e-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccce----eecc--cccceeeeccCCcCccceeEEEE
Confidence 2 77889999999999 999999998 999999998765321 1111 01111122333444 8999999
Q ss_pred cCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 256 ANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 256 s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
+|++++|++++. +.|++||+++..+.+..+..|...+ .+++|+|++++|++++.||.|++||+.
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v---------------~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI---------------SDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE---------------EEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce---------------eEEEECCCCCEEEEecCCceEEEEECC
Confidence 999999999876 9999999986567788888877654 799999999999999999999999999
Q ss_pred CCCCceeEEecCCCCccceeeecCCcccccccceeeeecccC--------------c-ccC--CCCCccccccccccCeE
Q 014644 335 VGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQ--------------A-HEN--SSSGHHELSYNLSSKLL 397 (421)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~--------------~-~iw--~~~~~~~~~~~~~~~v~ 397 (421)
++ .....+. +...+..+.++|+ ...+++++.++ . ++| ..++......+|...|+
T Consensus 249 ~~-~~~~~~~-~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~ 319 (369)
T 3zwl_B 249 TL-QVLKKYE-TDCPLNTAVITPL-------KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLN 319 (369)
T ss_dssp TC-CEEEEEE-CSSCEEEEEECSS-------SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEE
T ss_pred CC-ceeeeec-CCCCceeEEecCC-------CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEE
Confidence 87 4455555 7788999999998 33788888777 4 666 33445556668899999
Q ss_pred EEEEccCCCeEEEec-CCceEEEe
Q 014644 398 HLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 398 ~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
+++|+|++++|++++ ++.+++|+
T Consensus 320 ~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 320 TVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEE
Confidence 999999999999998 56699997
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.6e-36 Score=274.04 Aligned_cols=283 Identities=15% Similarity=0.153 Sum_probs=222.9
Q ss_pred ccccccEEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.||++.|++|+| +|+ +++|+|||.|++|+|||+.+.+...
T Consensus 35 ~GH~~~V~~v~~--sp~~~~~l~S~s~D~~i~vWd~~~~~~~~------------------------------------- 75 (340)
T 4aow_A 35 KGHNGWVTQIAT--TPQFPDMILSASRDKTIIMWKLTRDETNY------------------------------------- 75 (340)
T ss_dssp CCCSSCEEEEEE--CTTCTTEEEEEETTSCEEEEEECCSSSCS-------------------------------------
T ss_pred CCccCCEEEEEE--eCCCCCEEEEEcCCCeEEEEECCCCCccc-------------------------------------
Confidence 379999999999 676 6899999999999999998754100
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
..+.+.+ .+|...|.+++|+|++++|+++ .|+.|++|+.. ........ ..+.
T Consensus 76 ------------------~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~-~~~~~~~~-------~~~~ 128 (340)
T 4aow_A 76 ------------------GIPQRAL-RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT-TGTTTRRF-------VGHT 128 (340)
T ss_dssp ------------------EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE-------ECCS
T ss_pred ------------------ceeeEEE-eCCCCCEEEEEECCCCCEEEEEcccccceEEeec-ccceeeee-------cCCC
Confidence 1444556 8999999999999999999999 99999999998 44443332 4566
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC--CEEEEe
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG--QHLLSR 265 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~ 265 (421)
..+..+.+++++ ..|++++.|+.+++||+...... .... ..|...+..++|++++ .+++++
T Consensus 129 ~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~---~~~~-------------~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 129 KDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKY---TVQD-------------ESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp SCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEE---EECS-------------SSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CceeEEEEeecC-ccceeecCCCeEEEEEeCCCceE---EEEe-------------ccccCcccceEEccCCCCcEEEEE
Confidence 788899999998 99999999999999998765422 1112 2347789999999875 466676
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+. +.|++||+++ ++.+..+.+|...+ .+++|+|++++|++|+.||.|++||+++. .....+.
T Consensus 192 ~~d~~i~i~d~~~-~~~~~~~~~h~~~v---------------~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~ 254 (340)
T 4aow_A 192 GWDKLVKVWNLAN-CKLKTNHIGHTGYL---------------NTVTVSPDGSLCASGGKDGQAMLWDLNEG-KHLYTLD 254 (340)
T ss_dssp ETTSCEEEEETTT-TEEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTCEEEEEETTTT-EEEEEEE
T ss_pred cCCCEEEEEECCC-CceeeEecCCCCcE---------------EEEEECCCCCEEEEEeCCCeEEEEEeccC-ceeeeec
Confidence 55 9999999986 88888888888765 79999999999999999999999999976 4455555
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCCc-----------cccccccccCeEEEEEccCCCeEEEec
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGH-----------HELSYNLSSKLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~-----------~~~~~~~~~~v~~~~~spd~~~la~~~ 412 (421)
. ...+..+.++|+ + .+++++.|+. ++|+.... .....+|...|++++|+||+++||+|+
T Consensus 255 ~-~~~v~~~~~~~~--~------~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 255 G-GDIINALCFSPN--R------YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp C-SSCEEEEEECSS--S------SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred C-CceEEeeecCCC--C------ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 4 467888888876 2 4666777888 99943211 112336788999999999999999998
Q ss_pred -CCceEEEeC
Q 014644 413 -GNSLFFHYA 421 (421)
Q Consensus 413 -~~~~~i~~~ 421 (421)
++.|+||++
T Consensus 326 ~Dg~v~iW~~ 335 (340)
T 4aow_A 326 TDNLVRVWQV 335 (340)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEeC
Confidence 556999974
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.8e-37 Score=302.84 Aligned_cols=286 Identities=14% Similarity=0.147 Sum_probs=222.1
Q ss_pred ccccccEEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|.+.|++|+| +++ +++|++|+.|++|+|||+.+.... .
T Consensus 379 ~~H~~~V~~v~~--~~~~~~~l~s~s~D~~i~~W~~~~~~~~-------~------------------------------ 419 (694)
T 3dm0_A 379 RAHTDMVTAIAT--PIDNADIIVSASRDKSIILWKLTKDDKA-------Y------------------------------ 419 (694)
T ss_dssp ECCSSCEEEEEC--CTTCCSEEEEEETTSEEEEEECCCSTTC-------S------------------------------
T ss_pred ccCCceeEEEEe--cCCCCCEEEEEeCCCcEEEEEccCCCcc-------c------------------------------
Confidence 379999999999 555 579999999999999998764200 0
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
..+.+.+ .+|...|.+++|+|++++|++| .|++|++||+. .+...+.+ .+|.
T Consensus 420 ------------------~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~-~~~~~~~~-------~~h~ 472 (694)
T 3dm0_A 420 ------------------GVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA-AGVSTRRF-------VGHT 472 (694)
T ss_dssp ------------------CEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE-------ECCS
T ss_pred ------------------cccccee-cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC-CCcceeEE-------eCCC
Confidence 0333445 7999999999999999999999 99999999998 55555544 7899
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC--CEEEEe
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG--QHLLSR 265 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~ 265 (421)
..|.+++|+|++ .+|++++.|++|++||+...... ..... ..+|...|.+++|+|++ ..++++
T Consensus 473 ~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~----~~~~~----------~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 473 KDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKY----TISEG----------GEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp SCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEE----EECSS----------TTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcce----eeccC----------CCCCCCcEEEEEEeCCCCcceEEEE
Confidence 999999999999 99999999999999998654321 11111 13457889999999987 578887
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+. +.|++||++. .+....+.+|...+ .+++|+|++++|++|+.||.|++||+.++ .....+.
T Consensus 538 s~d~~v~vwd~~~-~~~~~~~~~h~~~v---------------~~v~~spdg~~l~sg~~Dg~i~iwd~~~~-~~~~~~~ 600 (694)
T 3dm0_A 538 SWDKTVKVWNLSN-CKLRSTLAGHTGYV---------------STVAVSPDGSLCASGGKDGVVLLWDLAEG-KKLYSLE 600 (694)
T ss_dssp ETTSCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTSBCEEEETTTT-EEEECCB
T ss_pred eCCCeEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEec
Confidence 65 9999999986 78888888888765 79999999999999999999999999987 4344443
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCcccCCCC--Ccccccc-------------------ccccCeEEEEEcc
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSS--GHHELSY-------------------NLSSKLLHLAWHP 403 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~--~~~~~~~-------------------~~~~~v~~~~~sp 403 (421)
+...+..++|+|+ +. .|+++..++.++|+.. ....... .+...+++++|+|
T Consensus 601 -~~~~v~~~~~sp~--~~-----~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp 672 (694)
T 3dm0_A 601 -ANSVIHALCFSPN--RY-----WLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA 672 (694)
T ss_dssp -CSSCEEEEEECSS--SS-----EEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECT
T ss_pred -CCCcEEEEEEcCC--Cc-----EEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcC
Confidence 4567889999988 33 6666655555999332 2111111 1112378999999
Q ss_pred CCCeEEEec-CCceEEEeC
Q 014644 404 TTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 404 d~~~la~~~-~~~~~i~~~ 421 (421)
||++|++|+ ++.|++|+.
T Consensus 673 dg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 673 DGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp TSSEEEEEETTSEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEec
Confidence 999999998 566999974
No 29
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=294.67 Aligned_cols=333 Identities=11% Similarity=0.031 Sum_probs=225.9
Q ss_pred ccccccEEEEEEEEcCCC-------CeEEE-------------------EeCCCcEEEeecCCceeEE---eeecCCCCC
Q 014644 30 LEIEEKINRVRWCAAPNG-------SMFIL-------------------STNDKTIKLWKVRDQKVKK---IKEMDHFPF 80 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~-------~~l~t-------------------~s~d~~v~lwd~~~~~~~~---~~~~~~~~~ 80 (421)
+.+...|.+|+|+|.+.+ ++||+ ++.|++|+|||+.+++... .....+.+.
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~ 209 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGE 209 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCS
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCc
Confidence 446789999999876522 45555 5578999999998765321 112234466
Q ss_pred cccccccccccceeeccCCCCceeeeecccccccceeEEeecccce--------eeeeeeecCCCCcceEEEeecCCCCE
Q 014644 81 VSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVH--------ARCQKVYPHAHDFNINSISNNSDCET 152 (421)
Q Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~h~~~v~~l~~~~~~~~ 152 (421)
|.+++|.+.. ...++...+++++. ++.+++|++..... ..+...+ .+|...|++++|++++ .
T Consensus 210 V~~v~wsp~~------~~~~~~~~LAs~s~--DgtvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 210 VWDLKWHEGC------HAPHLVGCLSFVSQ--EGTINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEEECSSC------CCSSSSCEEEEEET--TSCEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSSS-E
T ss_pred EEEEEECCCC------CCCCCCceEEEEec--CCeEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCCC-e
Confidence 6666666531 11123456666665 57899999876521 1233456 7899999999999864 7
Q ss_pred EEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEE--EEecCCCCeEEEEEcCCeEEEEECCcccccccchhh
Q 014644 153 FVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSA--EFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARI 229 (421)
Q Consensus 153 l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 229 (421)
|++| .||+|++||++........ +.+|...|.++ .|+|++.++|++++.|++|++||+++++.. ..
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~-------~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~----~~ 348 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFY-------DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT----KT 348 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEE-------EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH----CE
T ss_pred EEEEeCCCEEEEEECCCCCCceEE-------eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc----cc
Confidence 8898 9999999999843333332 36899999999 567775478999999999999999986543 23
Q ss_pred hccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeee
Q 014644 230 LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKF 308 (421)
Q Consensus 230 ~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (421)
+..|. ....+.+++|+|+++.++++++ ++|++||+++ +..+..+.+|...+ .
T Consensus 349 ~~~~~-----------~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V---------------~ 401 (524)
T 2j04_B 349 TVSRF-----------RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTI---------------T 401 (524)
T ss_dssp EEEEC-----------SCCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCE---------------E
T ss_pred ccccc-----------ccCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCce---------------E
Confidence 33320 0124789999999999998866 9999999986 77777888888765 8
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec-----CCCCccceeeecCCcccccccceeeeecccCcccC--C
Q 014644 309 ECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA-----GKNENRKPILQAAPRARRSSLSNLTRGLYRQAHEN--S 381 (421)
Q Consensus 309 ~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw--~ 381 (421)
+++|+|+|++|++|+.||+|++||+... ....+.. +...+..++|+|+ +. .+ .. .+..++| .
T Consensus 402 sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~--g~-----~~-~~-~~~~~~~~~~ 470 (524)
T 2j04_B 402 AIGVSRLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIK--DD-----KY-RI-DSSYEVYPLT 470 (524)
T ss_dssp EEECCSSCCBCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSS--SC-----EE-EE-CCCCCCCC--
T ss_pred EEEeCCCCCeEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCC--CC-----eE-Ec-cCCceecccc
Confidence 9999999999999999999999998643 2221111 1113557777776 22 23 22 2223444 3
Q ss_pred -CCCccccccccccCeEEEEEccCCC---eEEEecC-CceEEEeC
Q 014644 382 -SSGHHELSYNLSSKLLHLAWHPTTN---LIACANG-NSLFFHYA 421 (421)
Q Consensus 382 -~~~~~~~~~~~~~~v~~~~~spd~~---~la~~~~-~~~~i~~~ 421 (421)
.+..+..+.+|...|.+++|+|+++ +||+|+. +.++||+.
T Consensus 471 ~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l 515 (524)
T 2j04_B 471 VNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYL 515 (524)
T ss_dssp -----------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEEC
T ss_pred cCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEc
Confidence 3556667778999999999999965 8999995 66999973
No 30
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8e-37 Score=273.59 Aligned_cols=239 Identities=17% Similarity=0.208 Sum_probs=206.4
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|...|.+++| ++++.++++++.|++|++||+.+++
T Consensus 77 ~gh~~~v~~~~~--~~~~~~l~s~s~D~~i~lWd~~~~~----------------------------------------- 113 (321)
T 3ow8_A 77 EGHQLGVVSVDI--SHTLPIAASSSLDAHIRLWDLENGK----------------------------------------- 113 (321)
T ss_dssp CCCSSCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTE-----------------------------------------
T ss_pred ccCCCCEEEEEE--CCCCCEEEEEeCCCcEEEEECCCCC-----------------------------------------
Confidence 479999999999 7889999999999999999998764
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
+++.+ ..|...+.+++|+|++++|+++ .|+.|++|+++.. +....+ ..|..
T Consensus 114 -------------------~~~~~-~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~-~~~~~~-------~~~~~ 165 (321)
T 3ow8_A 114 -------------------QIKSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG-KKEYSL-------DTRGK 165 (321)
T ss_dssp -------------------EEEEE-ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC-SEEEEE-------ECSSS
T ss_pred -------------------EEEEE-eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC-ceeEEe-------cCCCc
Confidence 12223 4667788899999999999999 9999999999844 333333 56778
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY- 267 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (421)
.|.+++|+|++ ++|++++.|+.|++||+++++.. ..+.. |...|.+++|+|++++|++++.
T Consensus 166 ~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~----~~~~~-------------h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 166 FILSIAYSPDG-KYLASGAIDGIINIFDIATGKLL----HTLEG-------------HAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCCCEEEECTTSCEEEEECTT
T ss_pred eEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEE----EEEcc-------------cCCceeEEEEcCCCCEEEEEcCC
Confidence 89999999999 99999999999999999987643 33444 4788999999999999999976
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
+.|++||++. ++....+.+|...+ .+++|+|++++|++++.|+.|++||+.++ .....+.+|.
T Consensus 228 g~i~iwd~~~-~~~~~~~~~h~~~v---------------~~~~~sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~h~ 290 (321)
T 3ow8_A 228 GYIKIYDVQH-ANLAGTLSGHASWV---------------LNVAFCPDDTHFVSSSSDKSVKVWDVGTR-TCVHTFFDHQ 290 (321)
T ss_dssp SCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCCS
T ss_pred CeEEEEECCC-cceeEEEcCCCCce---------------EEEEECCCCCEEEEEeCCCcEEEEeCCCC-EEEEEEcCCC
Confidence 9999999986 78888888888765 79999999999999999999999999987 6778889999
Q ss_pred CCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
..|..++|+++ + ..|++++.|+. ++|+
T Consensus 291 ~~v~~v~~s~~--g-----~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 291 DQVWGVKYNGN--G-----SKIVSVGDDQEIHIYD 318 (321)
T ss_dssp SCEEEEEECTT--S-----SEEEEEETTCCEEEEE
T ss_pred CcEEEEEECCC--C-----CEEEEEeCCCeEEEEe
Confidence 99999999998 3 38999999999 9994
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.4e-36 Score=283.94 Aligned_cols=288 Identities=14% Similarity=0.144 Sum_probs=205.6
Q ss_pred cccccEEEEEEEEcC-CCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 31 EIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~-~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.|...|++|+| +| ++++||+|+.||+|+|||+.+++..
T Consensus 117 ~~~~~V~~l~~--~P~~~~~lasGs~dg~i~lWd~~~~~~~--------------------------------------- 155 (435)
T 4e54_B 117 PFDRRATSLAW--HPTHPSTVAVGSKGGDIMLWNFGIKDKP--------------------------------------- 155 (435)
T ss_dssp ECSSCEEEEEE--CSSCTTCEEEEETTSCEEEECSSCCSCC---------------------------------------
T ss_pred CCCCCEEEEEE--eCCCCCEEEEEeCCCEEEEEECCCCCce---------------------------------------
Confidence 57889999999 66 5779999999999999999875411
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
+...+ .+|.+.|++|+|+| ++++|+++ .|++|++||++ ... ...+. ....+.
T Consensus 156 -------------------~~~~~-~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~-~~~-~~~~~----~~~~~~ 209 (435)
T 4e54_B 156 -------------------TFIKG-IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK-GNI-LRVFA----SSDTIN 209 (435)
T ss_dssp -------------------EEECC-CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT-SCE-EEEEE----CCSSCS
T ss_pred -------------------eEEEc-cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-CCc-eeEEe----ccCCCC
Confidence 11123 68999999999998 68999999 99999999998 333 22221 123445
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEEEec
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSRD 266 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~ 266 (421)
..+.+++|+|++ .+|++|+.||.|++||++... ...+.. |...|.+++|+|++. ++++++
T Consensus 210 ~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~-----~~~~~~-------------h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 210 IWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE-----LWNLRM-------------HKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp CCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB-----CCCSBC-------------CSSCEEEEEECTTCSSEEEEEE
T ss_pred ccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce-----eEEEec-------------ccceEEeeeecCCCceEEEEec
Confidence 668899999999 999999999999999987532 133333 488999999999987 566776
Q ss_pred C-CeEEEEECCCCCccee---EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeE
Q 014644 267 Y-MNLKLWDIRMDSTPVA---TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGIT 342 (421)
Q Consensus 267 ~-~~i~i~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 342 (421)
. +.|++||+++ .+... ...+|...+ .+++|+|+|++|++++.||.|+|||+.++ .....
T Consensus 271 ~d~~v~iwd~~~-~~~~~~~~~~~~h~~~v---------------~~~~~spdg~~l~s~~~D~~i~iwd~~~~-~~~~~ 333 (435)
T 4e54_B 271 VDQTVKIWDLRQ-VRGKASFLYSLPHRHPV---------------NAACFSPDGARLLTTDQKSEIRVYSASQW-DCPLG 333 (435)
T ss_dssp TTSBCCEEETTT-CCSSSCCSBCCBCSSCE---------------EECCBCTTSSEEEEEESSSCEEEEESSSS-SSEEE
T ss_pred CcceeeEEeccc-ccccceEEEeeeccccc---------------cceeECCCCCeeEEEcCCCEEEEEECCCC-ccceE
Confidence 5 9999999986 33322 223455543 78999999999999999999999999987 44455
Q ss_pred EecCCCC------ccceeeecCCccc----c-cccceeeeecccCc-ccCC--CCCccccc-cccccCeEEE-EEccCCC
Q 014644 343 VEAGKNE------NRKPILQAAPRAR----R-SSLSNLTRGLYRQA-HENS--SSGHHELS-YNLSSKLLHL-AWHPTTN 406 (421)
Q Consensus 343 ~~~~~~~------~~~~~~~~~~~~~----~-~~~~~l~~g~~d~~-~iw~--~~~~~~~~-~~~~~~v~~~-~~spd~~ 406 (421)
+..|... .....+.+..... . .+...++.+..++. ++|+ .++.+... .+|...|.++ +|||+|+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~ 413 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD 413 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS
T ss_pred EecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC
Confidence 5554422 1223344431000 0 00012222233344 7783 33344333 3577788887 6999999
Q ss_pred eEEEecCCceEEEeC
Q 014644 407 LIACANGNSLFFHYA 421 (421)
Q Consensus 407 ~la~~~~~~~~i~~~ 421 (421)
+||+|+++.|+||+.
T Consensus 414 ~lasg~d~~i~iW~~ 428 (435)
T 4e54_B 414 TLASAMGYHILIWSQ 428 (435)
T ss_dssp CEEEECSSEEEECCC
T ss_pred EEEEEcCCcEEEEEC
Confidence 999999999999974
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-36 Score=281.73 Aligned_cols=238 Identities=20% Similarity=0.282 Sum_probs=208.7
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|.+.|++++| ++++++|++|+.|++|+|||+.+++
T Consensus 148 ~h~~~V~~v~~--~~~~~~l~sgs~D~~i~iwd~~~~~------------------------------------------ 183 (410)
T 1vyh_C 148 GHTDSVQDISF--DHSGKLLASCSADMTIKLWDFQGFE------------------------------------------ 183 (410)
T ss_dssp CCSSCEEEEEE--CTTSSEEEEEETTSCCCEEETTSSC------------------------------------------
T ss_pred ccCCcEEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCc------------------------------------------
Confidence 69999999999 7899999999999999999987643
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
+++.+ .+|...|.+++|+|++++|++| .|++|++||++ .+.++..+ .+|...
T Consensus 184 ------------------~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~-~~~~~~~~-------~~h~~~ 236 (410)
T 1vyh_C 184 ------------------CIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ-TGYCVKTF-------TGHREW 236 (410)
T ss_dssp ------------------EEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-TCCEEEEE-------ECCSSC
T ss_pred ------------------eeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCcEEEEE-------eCCCcc
Confidence 33445 7899999999999999999999 99999999998 55666554 689999
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC-----------
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND----------- 258 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~----------- 258 (421)
|.++.|+|++ .+|++++.|++|++||++++... ..+.. |...|.+++|+|+
T Consensus 237 v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 237 VRMVRPNQDG-TLIASCSNDQTVRVWVVATKECK----AELRE-------------HRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp EEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE----EEECC-------------CSSCEEEEEECCSCGGGGGGGCCS
T ss_pred EEEEEECCCC-CEEEEEcCCCeEEEEECCCCcee----eEecC-------------CCceEEEEEEcCcccccchhhhcc
Confidence 9999999999 99999999999999999886543 23333 4788999999996
Q ss_pred ---------CCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeE
Q 014644 259 ---------GQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLL 328 (421)
Q Consensus 259 ---------~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i 328 (421)
|.+|++|+. +.|++||+++ +.++..+.+|...+ .+++|+|++++|++|+.||.|
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v---------------~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWV---------------RGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCE---------------EEEEECSSSSCEEEEETTTEE
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcE---------------EEEEEcCCCCEEEEEeCCCeE
Confidence 668998876 9999999987 88888999888765 799999999999999999999
Q ss_pred EEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 329 RIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
++||+.++ .....+.+|...|.+++|+|+ ...|++|+.|+. ++|.
T Consensus 363 ~vwd~~~~-~~~~~~~~h~~~v~~l~~~~~-------~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 363 RVWDYKNK-RCMKTLNAHEHFVTSLDFHKT-------APYVVTGSVDQTVKVWE 408 (410)
T ss_dssp EEECCTTS-CCCEEEECCSSCEEEEEECSS-------SSCEEEEETTSEEEEEC
T ss_pred EEEECCCC-ceEEEEcCCCCcEEEEEEcCC-------CCEEEEEeCCCcEEEEe
Confidence 99999876 677889999999999999998 348999999999 9993
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.3e-36 Score=275.46 Aligned_cols=284 Identities=9% Similarity=0.057 Sum_probs=227.4
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccc
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 111 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 111 (421)
|+++|++++| +|++++|++++.|+.|++||+.+++.
T Consensus 7 ~~~~i~~~~~--s~~~~~l~~~~~d~~v~i~~~~~~~~------------------------------------------ 42 (372)
T 1k8k_C 7 LVEPISCHAW--NKDRTQIAICPNNHEVHIYEKSGNKW------------------------------------------ 42 (372)
T ss_dssp CSSCCCEEEE--CTTSSEEEEECSSSEEEEEEEETTEE------------------------------------------
T ss_pred cCCCeEEEEE--CCCCCEEEEEeCCCEEEEEeCCCCcE------------------------------------------
Confidence 7899999999 79999999999999999999877541
Q ss_pred cccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCe
Q 014644 112 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 190 (421)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 190 (421)
+++..+ .+|...|.+++|+|++++|+++ .|+.|++||++ .++..... .+..|...|
T Consensus 43 ----------------~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~-----~~~~~~~~v 99 (372)
T 1k8k_C 43 ----------------VQVHEL-KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK-GRTWKPTL-----VILRINRAA 99 (372)
T ss_dssp ----------------EEEEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE-TTEEEEEE-----ECCCCSSCE
T ss_pred ----------------Eeeeee-cCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC-CCeeeeeE-----EeecCCCce
Confidence 233445 6899999999999999999999 99999999998 44433332 235688999
Q ss_pred eEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-Ce
Q 014644 191 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 269 (421)
Q Consensus 191 ~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 269 (421)
.+++|+|++ ++|++++.|+.|++||++.+......... ...|...|.+++|+|++++|++++. +.
T Consensus 100 ~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 100 RCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHI-------------KKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEE-------------CTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeee-------------ecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 999999999 99999999999999999876421000111 1234778999999999999999875 99
Q ss_pred EEEEECCC-----------------CCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEe
Q 014644 270 LKLWDIRM-----------------DSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFS 332 (421)
Q Consensus 270 i~i~d~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd 332 (421)
|++||++. .++.+..+..|...+ .+++|+|++++|++++.||.|++||
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV---------------HGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE---------------EEEEECSSSSEEEEEETTTEEEEEE
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeE---------------EEEEECCCCCEEEEEeCCCEEEEEE
Confidence 99999641 255666666666544 7999999999999999999999999
Q ss_pred cCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCC--c------------------------
Q 014644 333 HGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG--H------------------------ 385 (421)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~--~------------------------ 385 (421)
++++ .....+..|..++..++|+|+ +.+|++| .|+. ++|+... .
T Consensus 231 ~~~~-~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (372)
T 1k8k_C 231 ADKK-MAVATLASETLPLLAVTFITE-------SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARER 301 (372)
T ss_dssp GGGT-TEEEEEECSSCCEEEEEEEET-------TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHH
T ss_pred CCCC-ceeEEEccCCCCeEEEEEecC-------CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhh
Confidence 9987 677888999999999999988 3377777 7777 9993322 0
Q ss_pred ----------c------ccc-cccccCeEEEEEc-cCC---CeEEEec-CCceEEEe
Q 014644 386 ----------H------ELS-YNLSSKLLHLAWH-PTT---NLIACAN-GNSLFFHY 420 (421)
Q Consensus 386 ----------~------~~~-~~~~~~v~~~~~s-pd~---~~la~~~-~~~~~i~~ 420 (421)
. ... .+|...|++++|+ ++| ++|++++ ++.+++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 302 FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp HHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred hhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 0 222 3889999999977 666 8999999 56699997
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9e-36 Score=300.40 Aligned_cols=325 Identities=14% Similarity=0.122 Sum_probs=256.3
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +|++.+|++++.||+|+|||+.+++...... .+..+|.++ .+++++.+++.++
T Consensus 10 ~~h~~~v~~i~~--sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~-~~~~~v~~~------------~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 10 SNRSDRVKGIDF--HPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ-VTETPVRAG------------KFIARKNWIIVGS 74 (814)
T ss_dssp EEECSCEEEEEE--CSSSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEE------------EEEGGGTEEEEEE
T ss_pred ecCCCceEEEEE--CCCCCEEEEEeCCCEEEEEECCCCceEEEEe-cCCCcEEEE------------EEeCCCCEEEEEe
Confidence 368999999999 7999999999999999999999887333222 344544444 4445555566655
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
. ++.+++|+..++ +++..+ .+|.+.|++++|+|++++|+++ .|++|++||++........+ .+|..
T Consensus 75 ~--dg~i~vw~~~~~---~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-------~~~~~ 141 (814)
T 3mkq_A 75 D--DFRIRVFNYNTG---EKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-------EGHEH 141 (814)
T ss_dssp T--TSEEEEEETTTC---CEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-------ECCSS
T ss_pred C--CCeEEEEECCCC---cEEEEE-ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-------cCCCC
Confidence 4 668999999887 778888 8999999999999999999999 99999999998544555544 67899
Q ss_pred CeeEEEEec-CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC--CCCEEEEe
Q 014644 189 VITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN--DGQHLLSR 265 (421)
Q Consensus 189 ~v~~~~~~p-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~ 265 (421)
.|.+++|+| ++ ..|++++.||.|++||+..+... ..+.. .+...+..++|+| ++.+|+++
T Consensus 142 ~v~~~~~~p~~~-~~l~~~~~dg~v~vwd~~~~~~~----~~~~~------------~~~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 142 FVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPN----FTLTT------------GQERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp CEEEEEEETTEE-EEEEEEETTSEEEEEETTCSSCS----EEEEC------------CCTTCCCEEEECCSTTCCEEEEE
T ss_pred cEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcce----eEEec------------CCCCCEEEEEEEECCCCCEEEEE
Confidence 999999999 66 89999999999999999876532 22222 1246899999999 99999998
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+. +.|++||+++ ++.+..+.+|...+ .+++|+|++++|++++.||.|++||+.++ .....+.
T Consensus 205 ~~dg~i~~~d~~~-~~~~~~~~~~~~~v---------------~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~ 267 (814)
T 3mkq_A 205 SDDLTIKIWDYQT-KSCVATLEGHMSNV---------------SFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLN 267 (814)
T ss_dssp CTTSEEEEEETTT-TEEEEEEECCSSCE---------------EEEEECSSSSEEEEEETTSCEEEEETTTC-SEEEEEC
T ss_pred eCCCEEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEee
Confidence 76 9999999986 88888888887654 79999999999999999999999999987 6788889
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCcccCCCCC------------cc--------------------------
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSG------------HH-------------------------- 386 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~------------~~-------------------------- 386 (421)
.|...+..++++|+. . ..+++++..++..+|.... .+
T Consensus 268 ~~~~~v~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (814)
T 3mkq_A 268 VGLERSWCIATHPTG--R---KNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQD 342 (814)
T ss_dssp CSSSSEEEEEECTTC--G---GGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSS
T ss_pred cCCCcEEEEEEccCC--C---ceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccC
Confidence 999999999999882 2 1146666655544441110 00
Q ss_pred -------ccccccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 387 -------ELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 387 -------~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
.....+...+.+++|+|+|++|++++++.+.+|+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~ 384 (814)
T 3mkq_A 343 EPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTA 384 (814)
T ss_dssp SCBCCCCEEECCCSSCCSEEEECTTSSEEEEEETTEEEEEET
T ss_pred ccceeeeecCCCCccCCceeEECCCCCEEEEecCCEEEEEEC
Confidence 00122344678999999999999999999999973
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-35 Score=263.09 Aligned_cols=249 Identities=15% Similarity=0.184 Sum_probs=192.8
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| ++++++||+|+.|++|+|||+.+...
T Consensus 6 ~~h~~~V~~~~~--s~~g~~las~s~D~~v~iw~~~~~~~---------------------------------------- 43 (297)
T 2pm7_B 6 NAHNEMIHDAVM--DYYGKRMATCSSDKTIKIFEVEGETH---------------------------------------- 43 (297)
T ss_dssp CSCSSCEEEEEE--CTTSSEEEEEETTSCEEEEEBCSSCB----------------------------------------
T ss_pred cCCcCceEEEEE--CCCCCEEEEEeCCCEEEEEecCCCCc----------------------------------------
Confidence 479999999999 79999999999999999999875320
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCc-eeeeeeecCCCCCCc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISD-QCFNIVDMKPSNMDD 185 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~-~~~~~~~~~~~~~~~ 185 (421)
+++..+ .+|.+.|.+++|+++ +++|++| .|++|++||++... ..... +.+
T Consensus 44 ------------------~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~-------~~~ 97 (297)
T 2pm7_B 44 ------------------KLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV-------HAV 97 (297)
T ss_dssp ------------------CCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE-------ECC
T ss_pred ------------------EEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE-------eec
Confidence 333455 799999999999864 8999999 99999999998332 12222 367
Q ss_pred cCCCeeEEEEecC--CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC-----
Q 014644 186 LTEVITSAEFHPI--YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND----- 258 (421)
Q Consensus 186 ~~~~v~~~~~~p~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~----- 258 (421)
|...|.+++|+|+ + .+|++++.|++|++||++.+.... ... +..|...|.+++|+|+
T Consensus 98 h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~--~~~-------------~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 98 HSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTS--PII-------------IDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp CSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBC--CEE-------------EECCSSCEEEEEECCCC----
T ss_pred CCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCcee--eee-------------eecccCccceEeecCCccccc
Confidence 8999999999997 6 899999999999999998753210 112 2345789999999997
Q ss_pred --------CCEEEEecC-CeEEEEECCCCCc----ceeEEeeccCcccccccccCCCcceeeeEEEEcCCC---CEEEEe
Q 014644 259 --------GQHLLSRDY-MNLKLWDIRMDST----PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG---LHFATG 322 (421)
Q Consensus 259 --------~~~l~~~~~-~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~l~~~ 322 (421)
+++|++++. +.|++||++. +. ....+.+|...+ .+++|+|++ ++|+++
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~-~~~~~~~~~~l~~H~~~V---------------~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNS-DAQTYVLESTLEGHSDWV---------------RDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEET-TTTEEEEEEEECCCSSCE---------------EEEEECCCCSSSEEEEEE
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcC-CCceEEEEEEecCCCCce---------------EEEEECCCCCCceEEEEE
Confidence 568998865 9999999976 43 455677887765 899999984 899999
Q ss_pred eCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEc
Q 014644 323 SYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWH 402 (421)
Q Consensus 323 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~s 402 (421)
+.|++|+|||+++....... .. .....|...|.+++|+
T Consensus 226 s~D~~v~iWd~~~~~~~~~~----------~~--------------------------------~~~~~~~~~v~~~~~s 263 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKK----------TL--------------------------------LKEEKFPDVLWRASWS 263 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEE----------EE--------------------------------SSSSCCSSCEEEEEEC
T ss_pred ECCCcEEEEEeCCCCCccce----------ee--------------------------------eecccCCCcEEEEEEC
Confidence 99999999998764211000 00 0001345678899999
Q ss_pred cCCCeEEEec-CCceEEEe
Q 014644 403 PTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 403 pd~~~la~~~-~~~~~i~~ 420 (421)
|++++||+++ ++.++||+
T Consensus 264 ~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 264 LSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp SSSCCEEEEETTSCEEEEE
T ss_pred CCCCEEEEEcCCCcEEEEE
Confidence 9999999887 55689986
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-35 Score=271.48 Aligned_cols=280 Identities=13% Similarity=0.130 Sum_probs=214.7
Q ss_pred ccccccEEEEEEEEcCCC-CeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNG-SMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~-~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...|++++| ++++ ++|++|+.|++|+|||+.+++....
T Consensus 70 ~~h~~~v~~~~~--~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------------------------ 111 (383)
T 3ei3_B 70 SPFDRRVTSLEW--HPTHPTTVAVGSKGGDIILWDYDVQNKTSF------------------------------------ 111 (383)
T ss_dssp CCCSSCEEEEEE--CSSCTTEEEEEEBTSCEEEEETTSTTCEEE------------------------------------
T ss_pred cCCCCCEEEEEE--CCCCCCEEEEEcCCCeEEEEeCCCccccee------------------------------------
Confidence 478999999999 6887 8999999999999999987542111
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
... .+|...|.+++|+| ++++|+++ .|+.|++||++ + .....+. ....|
T Consensus 112 ----------------------~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~-~~~~~~~----~~~~~ 162 (383)
T 3ei3_B 112 ----------------------IQG-MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS-G-SVIQVFA----KTDSW 162 (383)
T ss_dssp ----------------------ECC-CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-S-CEEEEEE----CCCCS
T ss_pred ----------------------eec-CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-C-CceEEEe----ccCCC
Confidence 111 47999999999999 78999998 99999999998 3 3333331 22446
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEEEe
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSR 265 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 265 (421)
...|.+++|+|++ .+|++++.|+.|++||++.. .. ..+.. |...|.+++|+|+++ +++++
T Consensus 163 ~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-~~----~~~~~-------------h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 163 DYWYCCVDVSVSR-QMLATGDSTGRLLLLGLDGH-EI----FKEKL-------------HKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp SCCEEEEEEETTT-TEEEEEETTSEEEEEETTSC-EE----EEEEC-------------SSSCEEEEEECSSCTTEEEEE
T ss_pred CCCeEEEEECCCC-CEEEEECCCCCEEEEECCCC-EE----EEecc-------------CCCcEEEEEECCCCCCEEEEE
Confidence 6889999999999 99999999999999999532 11 33333 478999999999999 88888
Q ss_pred cC-CeEEEEECCCC---CcceeEEeeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCCCeEEEEecCCCCCce
Q 014644 266 DY-MNLKLWDIRMD---STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYSNLLRIFSHGVGSAGG 340 (421)
Q Consensus 266 ~~-~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~ 340 (421)
+. +.|++||+++. +..+..+ .|...+ .+++|+| ++++|++++.|+.|++||++++ ...
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v---------------~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~-~~~ 286 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAEM-PHEKPV---------------NAAYFNPTDSTKLLTTDQRNEIRVYSSYDW-SKP 286 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEEE-ECSSCE---------------EEEEECTTTSCEEEEEESSSEEEEEETTBT-TSC
T ss_pred eCCCEEEEEeCCCCCcccceEEEe-cCCCce---------------EEEEEcCCCCCEEEEEcCCCcEEEEECCCC-ccc
Confidence 65 99999999852 3344444 565544 7999999 9999999999999999999987 444
Q ss_pred eEEecCC-------CCccc----------eeeecCCcccccccceeeeecccCc-ccCC--CCCccccccc--cccCeEE
Q 014644 341 ITVEAGK-------NENRK----------PILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYN--LSSKLLH 398 (421)
Q Consensus 341 ~~~~~~~-------~~~~~----------~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~--~~~~v~~ 398 (421)
..+.+|. ..+.. ++++++ ++ + +|+.|+. ++|+ .++.+....+ +...+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~d--g~-----~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~ 357 (383)
T 3ei3_B 287 DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPD--DQ-----L--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISL 357 (383)
T ss_dssp SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCC--TT-----T--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCE
T ss_pred cccccccccccccccceEEeccCCCCceEEEecCC--cc-----c--ccCCCCeEEEEecCCCceeeeecCCCCCceEEE
Confidence 5555443 33332 334443 22 2 7888999 9993 4455555544 4567888
Q ss_pred EEEccCCCeEEEecCCceEEEeC
Q 014644 399 LAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 399 ~~~spd~~~la~~~~~~~~i~~~ 421 (421)
++|+|++++||+++++.|+||+.
T Consensus 358 ~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 358 NKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp EEECTTSSEEEEEETTEEEEEEC
T ss_pred EEEecCccEEEEecCCcEEEEec
Confidence 89999999999999889999974
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-35 Score=271.02 Aligned_cols=289 Identities=14% Similarity=0.117 Sum_probs=223.0
Q ss_pred ccccccEEEEEEEEc--CCCCeEEEEeCCCcEEEeecCCce-eEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 30 LEIEEKINRVRWCAA--PNGSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~--~~~~~l~t~s~d~~v~lwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
.+|.++|++++|+|. .....+++++.++.|++||+.+++ ...+..
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~-------------------------------- 62 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS-------------------------------- 62 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEE--------------------------------
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeee--------------------------------
Confidence 379999999999432 135667778888899999998765 221111
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC----CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCC
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD----CETFVSA-DDLRINLWNLEISDQCFNIVDMKPS 181 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~ 181 (421)
.....|...|.+++|+|+ +++|+++ .|+.|++||+. .++.+..+
T Consensus 63 -------------------------~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~----- 111 (366)
T 3k26_A 63 -------------------------YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-TMQCIKHY----- 111 (366)
T ss_dssp -------------------------EECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT-TCCEEEEE-----
T ss_pred -------------------------ccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch-hceEeeee-----
Confidence 001357889999999998 6789998 99999999998 45555544
Q ss_pred CCCccCCCeeEEEEec-CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC
Q 014644 182 NMDDLTEVITSAEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 260 (421)
Q Consensus 182 ~~~~~~~~v~~~~~~p-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (421)
.+|...|.+++|+| ++ .+|++++.||.|++||+++++.. ..+.. +..|...|.+++|+|+++
T Consensus 112 --~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~----~~~~~----------~~~~~~~v~~~~~~~~~~ 174 (366)
T 3k26_A 112 --VGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLV----AIFGG----------VEGHRDEVLSADYDLLGE 174 (366)
T ss_dssp --ESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEE----EEECS----------TTSCSSCEEEEEECTTSS
T ss_pred --cCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEE----EEecc----------cccccCceeEEEECCCCC
Confidence 67999999999999 77 99999999999999999987543 22211 123478999999999999
Q ss_pred EEEEecC-CeEEEEECCCCCcceeEEee----------------------------ccCcccccccccCCCcceeeeEEE
Q 014644 261 HLLSRDY-MNLKLWDIRMDSTPVATFKI----------------------------HEHLRPKLCDLYNNDSIFDKFECS 311 (421)
Q Consensus 261 ~l~~~~~-~~i~i~d~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+|++++. +.|++||+++ ++....+.. |... +.+++
T Consensus 175 ~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~ 238 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY---------------VDCVR 238 (366)
T ss_dssp EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC---------------CCEEE
T ss_pred EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcce---------------EEEEE
Confidence 9999876 9999999985 444332221 3332 27899
Q ss_pred EcCCCCEEEEeeCCCeEEEEecCCCCC-------------ceeEEecCCCCccceeeecCCcccccccceeeeecccCc-
Q 014644 312 VSGDGLHFATGSYSNLLRIFSHGVGSA-------------GGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA- 377 (421)
Q Consensus 312 ~sp~~~~l~~~s~dg~i~iwd~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~- 377 (421)
|+ +++|++++.||.|++||+.+... ....+.+|...+..++|+|+..+. +|++|+.|+.
T Consensus 239 ~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-----~l~~~~~dg~i 311 (366)
T 3k26_A 239 WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-----MLALGNQVGKL 311 (366)
T ss_dssp EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-----EEEEECTTSCE
T ss_pred Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-----EEEEEecCCcE
Confidence 98 77999999999999999987632 266778899999999999884444 8999999999
Q ss_pred ccCCCC--Ccc----cccccc--ccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 378 HENSSS--GHH----ELSYNL--SSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 378 ~iw~~~--~~~----~~~~~~--~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
++|+.. +.. ....+| ...|++++|+|++++|++++ ++.+++|+.
T Consensus 312 ~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 312 YVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 999332 222 234455 68999999999999999998 557999974
No 38
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.3e-35 Score=308.30 Aligned_cols=294 Identities=14% Similarity=0.137 Sum_probs=232.7
Q ss_pred cccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 29 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
..+|.+.|++++| +|+++++++|+.||+|++||+.+++...... .|.. .+.++.+++++.+++.+
T Consensus 611 ~~~h~~~v~~~~~--s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~------------~v~~~~~s~~~~~l~s~ 675 (1249)
T 3sfz_A 611 VRPHTDAVYHACF--SQDGQRIASCGADKTLQVFKAETGEKLLDIK-AHED------------EVLCCAFSSDDSYIATC 675 (1249)
T ss_dssp ECCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSS------------CEEEEEECTTSSEEEEE
T ss_pred EecccccEEEEEE--CCCCCEEEEEeCCCeEEEEECCCCCEEEEec-cCCC------------CEEEEEEecCCCEEEEE
Confidence 3479999999999 7999999999999999999999887322211 2434 55666666777777777
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecC--CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
+. ++.+++|+..++ +++..+ .+|...|.+++|+| ++.+++++ .|+.|++||++ .+.+...+ .+
T Consensus 676 ~~--d~~v~vwd~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~-~~~~~~~~-------~~ 741 (1249)
T 3sfz_A 676 SA--DKKVKIWDSATG---KLVHTY-DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN-QKECRNTM-------FG 741 (1249)
T ss_dssp ET--TSEEEEEETTTC---CEEEEE-ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETT-SSSEEEEE-------CC
T ss_pred eC--CCeEEEEECCCC---ceEEEE-cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECC-Ccchhhee-------cC
Confidence 65 568999999987 888888 89999999999999 55688888 99999999998 55555544 78
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
|...|.+++|+|++ ..|++++.||.|++||++++... ..+...................+.+++|+|+|+.++++
T Consensus 742 h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 816 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANER----KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVA 816 (1249)
T ss_dssp CSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEE----EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEE
T ss_pred CCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCccc----ceecccccccccCCccccccceEEEEEECCCCCEEEEE
Confidence 99999999999999 99999999999999999886543 11111000000000112224578899999999999999
Q ss_pred cCCeEEEEECCCCCcceeEEe-eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 266 DYMNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 266 ~~~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+++.+.+||+.+ +.....+. +|...+ .+++|+|+++++++++.||.|++||+.++ .....+.
T Consensus 817 ~~~~v~~~d~~~-~~~~~~~~~~~~~~v---------------~~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~ 879 (1249)
T 3sfz_A 817 AKNKVLLFDIHT-SGLLAEIHTGHHSTI---------------QYCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCR 879 (1249)
T ss_dssp ETTEEEEEETTT-CCEEEEEECSSSSCC---------------CEEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEEC
T ss_pred cCCcEEEEEecC-CCceeEEcCCCCCce---------------EEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecC
Confidence 889999999987 55555554 555544 79999999999999999999999999987 6778889
Q ss_pred cCCCCccceeeecCCcccccccceeeeecccCc-ccC
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
+|...+..++|+|+ + ..|++++.|+. ++|
T Consensus 880 ~h~~~v~~v~~spd--g-----~~l~s~s~dg~v~vw 909 (1249)
T 3sfz_A 880 GHLSWVHGVMFSPD--G-----SSFLTASDDQTIRVW 909 (1249)
T ss_dssp CCSSCEEEEEECTT--S-----SEEEEEETTSCEEEE
T ss_pred CCccceEEEEECCC--C-----CEEEEEeCCCeEEEE
Confidence 99999999999998 3 37888888888 888
No 39
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.6e-34 Score=282.02 Aligned_cols=338 Identities=10% Similarity=0.056 Sum_probs=253.9
Q ss_pred cccccc-EEEEEEEEcC--CCCeEEEEeCCCcEEEeecCCc------eeEEeeec-CCCCCcccccccccccceeeccCC
Q 014644 30 LEIEEK-INRVRWCAAP--NGSMFILSTNDKTIKLWKVRDQ------KVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNP 99 (421)
Q Consensus 30 ~~h~~~-V~~v~~~~~~--~~~~l~t~s~d~~v~lwd~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~ 99 (421)
.+|.+. |++++| +| ++++|++++.||+|++||+.++ +....... .+.. .+.++.++
T Consensus 60 ~~h~~~~v~~~~~--sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~s 125 (615)
T 1pgu_A 60 TGHGSSVVTTVKF--SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG------------PISDISWD 125 (615)
T ss_dssp CTTTTSCEEEEEE--CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS------------CEEEEEEC
T ss_pred ecCCCceEEEEEE--CcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc------------cEEEEEEe
Confidence 468999 999999 68 9999999999999999999765 32222222 2333 45566666
Q ss_pred CCceeeeecccccc--cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCC-EEEEE-cCCcEEEEeCCCCceeeee
Q 014644 100 PSFAHGYHLEWTEN--MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNI 175 (421)
Q Consensus 100 ~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~~~~~~~~~~ 175 (421)
+++.+++.++.+.. ..+.+|+ .. +++..+ .+|...|.+++|+|+++ .++++ .|+.|++||+. ..+....
T Consensus 126 ~~~~~l~~~~~~~~~~~~v~~~d--~~---~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~~~~ 198 (615)
T 1pgu_A 126 FEGRRLCVVGEGRDNFGVFISWD--SG---NSLGEV-SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP-PFKFSAS 198 (615)
T ss_dssp TTSSEEEEEECCSSCSEEEEETT--TC---CEEEEC-CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETT-TBEEEEE
T ss_pred CCCCEEEEeccCCCCccEEEEEE--CC---Ccceee-ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCC-Ccceeee
Confidence 67776666665333 4677777 33 566777 89999999999999998 78888 99999999998 5555554
Q ss_pred eecCCCCCCccCC---CeeEEEEecC-CCCeEEEEEcCCeEEEEECCcccccccchhhh-ccccccCCCcccccccccce
Q 014644 176 VDMKPSNMDDLTE---VITSAEFHPI-YCNLLAYSSSRGFVRLVDMRQSALCDHSARIL-RDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 176 ~~~~~~~~~~~~~---~v~~~~~~p~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~~v 250 (421)
+ .+|.. .|.+++|+|+ + .+|++++.|+.|++||+++++.. ..+ .. ...|...|
T Consensus 199 ~-------~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~----------~~~~~~~v 256 (615)
T 1pgu_A 199 D-------RTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFL----KYIEDD----------QEPVQGGI 256 (615)
T ss_dssp E-------CSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEE----EECCBT----------TBCCCSCE
T ss_pred e-------cccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEe----EEeccc----------ccccCCce
Confidence 4 67888 9999999999 8 99999999999999999887643 222 20 00347889
Q ss_pred eEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeec-----------------------------------------
Q 014644 251 SDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIH----------------------------------------- 288 (421)
Q Consensus 251 ~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~----------------------------------------- 288 (421)
.+++|+ ++++|++++. +.|++||+++ ++.+..+..+
T Consensus 257 ~~~~~~-~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~ 334 (615)
T 1pgu_A 257 FALSWL-DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKT 334 (615)
T ss_dssp EEEEES-SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEE
Confidence 999999 9999998875 9999999875 4443333322
Q ss_pred ----cCcccccc--------------------------------------------------------------------
Q 014644 289 ----EHLRPKLC-------------------------------------------------------------------- 296 (421)
Q Consensus 289 ----~~~~~~~~-------------------------------------------------------------------- 296 (421)
...+..++
T Consensus 335 ~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 414 (615)
T 1pgu_A 335 ISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA 414 (615)
T ss_dssp ECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEE
T ss_pred EeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEE
Confidence 10000000
Q ss_pred ---------------------------------------------------c---------------ccCCCcceeeeEE
Q 014644 297 ---------------------------------------------------D---------------LYNNDSIFDKFEC 310 (421)
Q Consensus 297 ---------------------------------------------------~---------------~~~~~~~~~~~~~ 310 (421)
. ..-......+.++
T Consensus 415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~ 494 (615)
T 1pgu_A 415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI 494 (615)
T ss_dssp CSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEE
T ss_pred cCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEE
Confidence 0 0000001125789
Q ss_pred EEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec-CCCCccceeeec----------CCcccccccceeeeecccCc-c
Q 014644 311 SVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA-GKNENRKPILQA----------APRARRSSLSNLTRGLYRQA-H 378 (421)
Q Consensus 311 ~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~l~~g~~d~~-~ 378 (421)
+|+|++++|++++.||.|++||+.++ .....+.+ |...+..++|+| + ..+|++++.|+. +
T Consensus 495 ~~s~~g~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~-------~~~l~~~~~dg~i~ 566 (615)
T 1pgu_A 495 SISPSETYIAAGDVMGKILLYDLQSR-EVKTSRWAFRTSKINAISWKPAEKGANEEEIE-------EDLVATGSLDTNIF 566 (615)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTT-EEEECCSCCCSSCEEEEEECCCC------CCS-------CCEEEEEETTSCEE
T ss_pred EECCCCCEEEEcCCCCeEEEeeCCCC-cceeEeecCCCCceeEEEEcCccccccccccC-------CCEEEEEcCCCcEE
Confidence 99999999999999999999999987 55666676 999999999999 6 348999999999 9
Q ss_pred cCCC--C-CccccccccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 379 ENSS--S-GHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 379 iw~~--~-~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
+|+. + .......+|...|++++|+|+++ |++++ ++.+++|+.
T Consensus 567 iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 567 IYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred EEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 9933 2 45566778999999999999999 88887 566999973
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.8e-36 Score=274.94 Aligned_cols=293 Identities=9% Similarity=0.084 Sum_probs=228.0
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| ++ ++|++|+.||+|++||+.+++... .
T Consensus 13 ~~h~~~i~~~~~--~~--~~l~s~~~dg~i~iw~~~~~~~~~-------~------------------------------ 51 (397)
T 1sq9_A 13 KAHDADIFSVSA--CN--SFTVSCSGDGYLKVWDNKLLDNEN-------P------------------------------ 51 (397)
T ss_dssp SCSSSCEEEEEE--CS--SEEEEEETTSEEEEEESBCCTTCC-------G------------------------------
T ss_pred hhhhcCeEEEEe--cC--CeEEEEcCCCEEEEEECCCccccc-------C------------------------------
Confidence 379999999999 55 899999999999999998754100 0
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC----C---CEEEEE-cCCcEEEEeCCCCcee-----eeee
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD----C---ETFVSA-DDLRINLWNLEISDQC-----FNIV 176 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~----~---~~l~s~-~d~~i~lwd~~~~~~~-----~~~~ 176 (421)
..++..+ .+|...|.+++|+|+ + ++|+++ .|+.|++||+.. .+. ...+
T Consensus 52 -----------------~~~~~~~-~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~~~~~ 112 (397)
T 1sq9_A 52 -----------------KDKSYSH-FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITR-EDETKKVIFEKL 112 (397)
T ss_dssp -----------------GGGEEEE-ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE-CTTTCCEEEEEE
T ss_pred -----------------CCcceEE-ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccC-Ccccccccceee
Confidence 0334445 689999999999999 9 999998 999999999983 332 3333
Q ss_pred ecCCCCCCcc-----CCCeeEEEEe----cCCCCe-EEEEEcCCeEEEEECCc------ccccc-cchhhhccccccCCC
Q 014644 177 DMKPSNMDDL-----TEVITSAEFH----PIYCNL-LAYSSSRGFVRLVDMRQ------SALCD-HSARILRDAAESHGS 239 (421)
Q Consensus 177 ~~~~~~~~~~-----~~~v~~~~~~----p~~~~~-l~s~~~d~~v~iwd~~~------~~~~~-~~~~~~~~h~~~~~~ 239 (421)
..| ...|.+++|+ |++ .. |++++.||.|++||++. +.... .....+.. .
T Consensus 113 -------~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------~ 178 (397)
T 1sq9_A 113 -------DLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG------T 178 (397)
T ss_dssp -------CCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE------E
T ss_pred -------cccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeee------e
Confidence 556 5899999999 998 88 99999999999999987 43221 00001110 0
Q ss_pred cccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEee---c---cCcccccccccCCCcceeeeEEEE
Q 014644 240 KSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKI---H---EHLRPKLCDLYNNDSIFDKFECSV 312 (421)
Q Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~ 312 (421)
......|...+.+++|+|++ ++++++. +.|++||+++ ++++..+.. | ...+ .+++|
T Consensus 179 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i---------------~~i~~ 241 (397)
T 1sq9_A 179 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSI---------------RSVKF 241 (397)
T ss_dssp ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCE---------------EEEEE
T ss_pred eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCcc---------------ceEEE
Confidence 00012357789999999999 9998876 9999999986 888888887 6 5543 79999
Q ss_pred cCCCCEEEEeeCC---CeEEEEecCCCCCceeEEec-------------CCCCccceeeecCCcccccccceeeeecccC
Q 014644 313 SGDGLHFATGSYS---NLLRIFSHGVGSAGGITVEA-------------GKNENRKPILQAAPRARRSSLSNLTRGLYRQ 376 (421)
Q Consensus 313 sp~~~~l~~~s~d---g~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~ 376 (421)
+|++++|++++.| |.|++||+.++ .....+.+ |...+..+.|+|+ ..+|++++.|+
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~~~dg 313 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFG-ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-------GETLCSAGWDG 313 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTC-CEEEEECBC--------CCBSBSSCEEEEEECSS-------SSEEEEEETTS
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCC-cccceeccCcccccccccccccCCcEEEEEECCC-------CCEEEEEeCCC
Confidence 9999999999999 99999999987 66777888 9999999999998 33899999999
Q ss_pred c-ccCC--CCCcccccc------cc---------------ccCeEEEEEccCC----------CeEEEec-CCceEEEeC
Q 014644 377 A-HENS--SSGHHELSY------NL---------------SSKLLHLAWHPTT----------NLIACAN-GNSLFFHYA 421 (421)
Q Consensus 377 ~-~iw~--~~~~~~~~~------~~---------------~~~v~~~~~spd~----------~~la~~~-~~~~~i~~~ 421 (421)
. ++|+ .++.+.... +| ...|++++|+|++ ++|++++ ++.+++|+.
T Consensus 314 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 314 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred eEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 9 9993 344444444 56 8899999999998 7899888 667999973
No 41
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-35 Score=294.81 Aligned_cols=348 Identities=9% Similarity=0.073 Sum_probs=236.6
Q ss_pred cccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeee----------cCCCCCcccccccccccceeec
Q 014644 27 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKE----------MDHFPFVSSENTLLAEKNFMNE 96 (421)
Q Consensus 27 ~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~ 96 (421)
+..+.|...|++++| +|++++|++|+.||+|++||+.++++..... ..|.++|.+++|++.+.
T Consensus 92 ~~~~~~~~~V~~v~~--sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~----- 164 (902)
T 2oaj_A 92 LTTVFVPGKITSIDT--DASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI----- 164 (902)
T ss_dssp EEEEECSSCEEEEEC--CTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE-----
T ss_pred EEEEcCCCCEEEEEE--CCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC-----
Confidence 344567889999999 7999999999999999999999887432211 22445555555554322
Q ss_pred cCCCCceeeeecccccccceeEEeecccceeeeeeeecCCC------------------CcceEEEeecCCCCEEEEE-c
Q 014644 97 HNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAH------------------DFNINSISNNSDCETFVSA-D 157 (421)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~l~s~-~ 157 (421)
..++.|.. ++.+ +||+... ++++.+ ..| ...|++++|+|+|++|+++ .
T Consensus 165 ------~~l~~g~~--dg~v-lWd~~~~---~~~~~~-~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 165 ------GTVLISYE--YVTL-TYSLVEN---EIKQSF-IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp ------EEEEEECS--SCEE-EEETTTT---EEEEEE-CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred ------CEEEEEeC--CCcE-EEECCCC---ceEEEE-ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 23333332 4578 9999887 666666 444 5789999999999999999 9
Q ss_pred CCcEEEEeCCCCceeeeeeecCCCCCC-----------ccCCCeeEEEEec----CCCCeEEEEEcC-----CeEEEEEC
Q 014644 158 DLRINLWNLEISDQCFNIVDMKPSNMD-----------DLTEVITSAEFHP----IYCNLLAYSSSR-----GFVRLVDM 217 (421)
Q Consensus 158 d~~i~lwd~~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~p----~~~~~l~s~~~d-----~~v~iwd~ 217 (421)
|++|++||+++ ++++....+...... .|...|.+++|++ ++..+|++++.| ..+++|++
T Consensus 232 Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 232 DNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCeEEEEECCC-CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 99999999984 444432111000000 2455788999954 332456666554 25666663
Q ss_pred Cc---------------------cccc-----------------------------------ccchhhhcccccc-----
Q 014644 218 RQ---------------------SALC-----------------------------------DHSARILRDAAES----- 236 (421)
Q Consensus 218 ~~---------------------~~~~-----------------------------------~~~~~~~~~h~~~----- 236 (421)
.. .+.. +..++.++. ..+
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~-~~g~~~~~ 389 (902)
T 2oaj_A 311 GYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLY-PSGIFTDK 389 (902)
T ss_dssp EECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEET-TTCCEECC
T ss_pred CCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEEC-CCCCcccc
Confidence 10 0000 000011110 000
Q ss_pred -----------------------------------CCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCc
Q 014644 237 -----------------------------------HGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDST 280 (421)
Q Consensus 237 -----------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~ 280 (421)
......+.+|...+..++|+|++++|++|+. ++|++||+.. +.
T Consensus 390 ~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~-g~ 468 (902)
T 2oaj_A 390 ASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASH-GD 468 (902)
T ss_dssp GGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSC-CT
T ss_pred cccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCC-cc
Confidence 0011123455556667778899999999976 9999999976 43
Q ss_pred ce--eEEe---------eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC------------
Q 014644 281 PV--ATFK---------IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS------------ 337 (421)
Q Consensus 281 ~~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~------------ 337 (421)
.. ..+. +|... |.+++|+|++++||+|+.||+|+|||+.++.
T Consensus 469 ~~~~~~~~~~l~~~~~~~h~~~---------------V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~ 533 (902)
T 2oaj_A 469 IQDNASFEVNLSRTLNKAKELA---------------VDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGD 533 (902)
T ss_dssp TTTTBCEEEEHHHHTTCSSSCC---------------EEEEEEETTTTEEEEEETTSCEEEEEEEECCC-----------
T ss_pred ccCCceEEeechhhcCCCCCCc---------------eeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcc
Confidence 21 1111 33332 3899999999999999999999999998652
Q ss_pred --------------------------------CceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCC
Q 014644 338 --------------------------------AGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG 384 (421)
Q Consensus 338 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~ 384 (421)
.....+.+|.++|.+++|+|+ + +||+|+.|+. ++|+...
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpd-------G-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 534 LEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNI-------G-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp ----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBT-------S-EEEEEETTSEEEEEETTT
T ss_pred cceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCC-------c-EEEEEeCCCcEEEEECCC
Confidence 125678899999999999999 6 8999999999 9995443
Q ss_pred cc-------cccc-ccccCeEEEEEc-----cCC---CeEEEec-CCceEEEe
Q 014644 385 HH-------ELSY-NLSSKLLHLAWH-----PTT---NLIACAN-GNSLFFHY 420 (421)
Q Consensus 385 ~~-------~~~~-~~~~~v~~~~~s-----pd~---~~la~~~-~~~~~i~~ 420 (421)
.. .... +|...|++++|+ ||| ++|++|+ ++.+++|+
T Consensus 606 ~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 606 PAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp TEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred CeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 21 1232 788999999999 886 7999998 56699997
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-36 Score=278.57 Aligned_cols=287 Identities=11% Similarity=0.098 Sum_probs=211.5
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccc
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 111 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 111 (421)
|.++|++++| +|++++|++|+.|++|+|||+.++..
T Consensus 10 ~~~~v~~~~~--s~~g~~l~~~~~d~~i~iw~~~~~~~------------------------------------------ 45 (377)
T 3dwl_C 10 LPKPSYEHAF--NSQRTEFVTTTATNQVELYEQDGNGW------------------------------------------ 45 (377)
T ss_dssp CSSCCSCCEE--CSSSSEEECCCSSSCBCEEEEETTEE------------------------------------------
T ss_pred CCCcEEEEEE--CCCCCEEEEecCCCEEEEEEccCCce------------------------------------------
Confidence 4678999999 78999999999999999999887531
Q ss_pred cccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCe
Q 014644 112 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 190 (421)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 190 (421)
+++..+ .+|...|.+++|+|++++|+++ .|++|++||+.......... .+.+|...|
T Consensus 46 ----------------~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v 103 (377)
T 3dwl_C 46 ----------------KHARTF-SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL-----VLLRLNRAA 103 (377)
T ss_dssp ----------------EECCCB-CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE-----ECCCCSSCE
T ss_pred ----------------EEEEEE-ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee-----EecccCCce
Confidence 222334 7899999999999999999999 99999999998433111111 236799999
Q ss_pred eEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-Ce
Q 014644 191 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 269 (421)
Q Consensus 191 ~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 269 (421)
.+++|+|++ ++|++++.|+.|++||++.++... ....+.. .|...|.+++|+|++++|++++. +.
T Consensus 104 ~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~------------~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 104 TFVRWSPNE-DKFAVGSGARVISVCYFEQENDWW-VSKHLKR------------PLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEEECCTTS-SCCEEEESSSCEEECCC-----CC-CCEEECS------------SCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEECCCC-CEEEEEecCCeEEEEEECCcccce-eeeEeec------------ccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 999999999 999999999999999998864210 0111211 15789999999999999999876 99
Q ss_pred EEEEECCCC-----------------CcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEe
Q 014644 270 LKLWDIRMD-----------------STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFS 332 (421)
Q Consensus 270 i~i~d~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd 332 (421)
|++||++.. ++++..+ .|...+ .+++|+|++++|++++.||.|++||
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v---------------~~~~~sp~~~~l~~~~~d~~i~iwd 233 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV---------------HAVGFSPSGNALAYAGHDSSVTIAY 233 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE---------------EEEEECTTSSCEEEEETTTEEC-CE
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE---------------EEEEECCCCCEEEEEeCCCcEEEEE
Confidence 999998531 2223333 444433 7999999999999999999999999
Q ss_pred cCCCCCc---eeEEecCCCCccceeeecCCcccccccceeeeecccCcccC-CC-CC-----ccc---------------
Q 014644 333 HGVGSAG---GITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHEN-SS-SG-----HHE--------------- 387 (421)
Q Consensus 333 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw-~~-~~-----~~~--------------- 387 (421)
+.++... ...+.+|..++..++|+|+ + .+|++|+.++..+| .. .+ .+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLSQLPLRSLLWANE--S-----AIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTG 306 (377)
T ss_dssp ECSTTSCEEECCCEECSSSCEEEEEEEET--T-----EEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBC
T ss_pred CCCCCCcceeeEeecCCCCceEEEEEcCC--C-----CEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccc
Confidence 9987431 6788999999999999998 3 48999988877544 22 10 000
Q ss_pred --------------------------------cccccccCeEEEEEccCCC----eEEEec-CCceEEEeC
Q 014644 388 --------------------------------LSYNLSSKLLHLAWHPTTN----LIACAN-GNSLFFHYA 421 (421)
Q Consensus 388 --------------------------------~~~~~~~~v~~~~~spd~~----~la~~~-~~~~~i~~~ 421 (421)
....|...|+++++.+... .|++++ ++.|++|+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 307 EGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0012888999999877653 477777 677999974
No 43
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=269.10 Aligned_cols=284 Identities=12% Similarity=0.092 Sum_probs=218.2
Q ss_pred ccccccEEEEEEEEcCCCCeE-EEEeC---CCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 30 LEIEEKINRVRWCAAPNGSMF-ILSTN---DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l-~t~s~---d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
.+|.+.|++++| +|++..+ ++|+. |++|+|||+.+++....
T Consensus 15 ~~h~~~v~~~~~--~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~--------------------------------- 59 (357)
T 3i2n_A 15 KGFNYTVFDCKW--VPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL--------------------------------- 59 (357)
T ss_dssp EECSSCEEEEEE--CTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE---------------------------------
T ss_pred cCCCCceEEEEE--cCCCceEEEecCccCCCcEEEEEeCCCCcccce---------------------------------
Confidence 469999999999 7887655 55655 99999999987652211
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC---CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD---CETFVSA-DDLRINLWNLEISDQCFNIVDMKPS 181 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~ 181 (421)
.. .+|...|.+++|+|+ +++|+++ .|+.|++||+.........+
T Consensus 60 -------------------------~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----- 107 (357)
T 3i2n_A 60 -------------------------RE--IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSV----- 107 (357)
T ss_dssp -------------------------EE--EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEE-----
T ss_pred -------------------------ee--ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEE-----
Confidence 11 368889999999998 6999998 99999999998444255444
Q ss_pred CCCccCCCeeEEEE------ecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEE-
Q 014644 182 NMDDLTEVITSAEF------HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK- 254 (421)
Q Consensus 182 ~~~~~~~~v~~~~~------~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~- 254 (421)
.+|...|.+++| +|++ .+|++++.|+.|++||++++... ...+..|. ..+...+.+++
T Consensus 108 --~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~~---~~~~~~~~---------~~~~~~v~~~~~ 172 (357)
T 3i2n_A 108 --KGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDDP---VANMEPVQ---------GENKRDCWTVAF 172 (357)
T ss_dssp --CCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSSC---SEEECCCT---------TSCCCCEEEEEE
T ss_pred --EecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCCc---ceeccccC---------CCCCCceEEEEE
Confidence 789999999965 6788 89999999999999999986522 12332210 01134788888
Q ss_pred ---EcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcC---CCCEEEEeeCCCe
Q 014644 255 ---FANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG---DGLHFATGSYSNL 327 (421)
Q Consensus 255 ---~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---~~~~l~~~s~dg~ 327 (421)
|+|+++++++++. +.|++||+++ ++... ...+...+ .+++|+| ++.+|++++.||.
T Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~-~~~~~~~v---------------~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 173 GNAYNQEERVVCAGYDNGDIKLFDLRN-MALRW-ETNIKNGV---------------CSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp ECCCC-CCCEEEEEETTSEEEEEETTT-TEEEE-EEECSSCE---------------EEEEESCSSSSCCEEEEEESTTE
T ss_pred EeccCCCCCEEEEEccCCeEEEEECcc-Cceee-ecCCCCce---------------EEEEcCCCCCCCCEEEEECCCCe
Confidence 7899999999876 9999999986 55533 34455443 7999999 9999999999999
Q ss_pred EEEEecCCCCCceeE-----EecCCCCccceeeecCCcccccccc-eeeeecccCc-ccCCCC-----------------
Q 014644 328 LRIFSHGVGSAGGIT-----VEAGKNENRKPILQAAPRARRSSLS-NLTRGLYRQA-HENSSS----------------- 383 (421)
Q Consensus 328 i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~d~~-~iw~~~----------------- 383 (421)
|++||++++ ..... +.+|...+..+.|+|+ .. +|++|+.|+. ++|+..
T Consensus 236 i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~ 307 (357)
T 3i2n_A 236 FHVFDMRTQ-HPTKGFASVSEKAHKSTVWQVRHLPQ-------NRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGV 307 (357)
T ss_dssp EEEEEEEEE-ETTTEEEEEEEECCSSCEEEEEEETT-------EEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCC
T ss_pred EEEEeCcCC-CcccceeeeccCCCcCCEEEEEECCC-------CCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccc
Confidence 999999876 33333 3499999999999998 33 7999999999 999322
Q ss_pred ----CccccccccccCeEEEEEccCCCeEE-Eec-CCceEEEe
Q 014644 384 ----GHHELSYNLSSKLLHLAWHPTTNLIA-CAN-GNSLFFHY 420 (421)
Q Consensus 384 ----~~~~~~~~~~~~v~~~~~spd~~~la-~~~-~~~~~i~~ 420 (421)
..+....+|...|++++|+|++++|+ +++ ++.+++|+
T Consensus 308 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 308 AGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp CCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEE
Confidence 12344567889999999999999998 677 66799997
No 44
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.5e-35 Score=310.02 Aligned_cols=340 Identities=14% Similarity=0.183 Sum_probs=263.7
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeE-Eeeec-----------CCCCCccccccccccc------
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVK-KIKEM-----------DHFPFVSSENTLLAEK------ 91 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~-~~~~~-----------~~~~~v~~~~~~~~~~------ 91 (421)
.+|...|++++| +|++.+|++++.||+|++||+.+++.. .+... .....+.+++|.+...
T Consensus 740 ~~h~~~v~~~~~--sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~ 817 (1249)
T 3sfz_A 740 FGHTNSVNHCRF--SPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA 817 (1249)
T ss_dssp CCCSSCEEEEEE--CSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE
T ss_pred cCCCCCEEEEEE--ecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc
Confidence 379999999999 789999999999999999999887632 22111 1122445555554332
Q ss_pred ------------------------ceeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeec
Q 014644 92 ------------------------NFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNN 147 (421)
Q Consensus 92 ------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 147 (421)
.+.++.++++...+..++. ++.+++|+..+. .++..+ .+|...|.+++|+
T Consensus 818 ~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--dg~v~vwd~~~~---~~~~~~-~~h~~~v~~v~~s 891 (1249)
T 3sfz_A 818 KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS--QYCVELWNIDSR---LKVADC-RGHLSWVHGVMFS 891 (1249)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS--SSCEEEEETTTT---EEEEEE-CCCSSCEEEEEEC
T ss_pred CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC--CCeEEEEEcCCC---ceeeec-CCCccceEEEEEC
Confidence 3334445555555555544 557999999887 778888 8999999999999
Q ss_pred CCCCEEEEE-cCCcEEEEeCCCCc--------------------------------------------------------
Q 014644 148 SDCETFVSA-DDLRINLWNLEISD-------------------------------------------------------- 170 (421)
Q Consensus 148 ~~~~~l~s~-~d~~i~lwd~~~~~-------------------------------------------------------- 170 (421)
|++++|+++ .|++|++|++....
T Consensus 892 pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 971 (1249)
T 3sfz_A 892 PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSP 971 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECT
T ss_pred CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcC
Confidence 999999998 99999999964100
Q ss_pred -----------eeeeeeecCC----CCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccc
Q 014644 171 -----------QCFNIVDMKP----SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAE 235 (421)
Q Consensus 171 -----------~~~~~~~~~~----~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~ 235 (421)
..+.+++... ..+.+|...|.+++|+|++ ++|++++.||.|++||+.++... ..
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~-----~~----- 1040 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG-KTLISSSEDSVIQVWNWQTGDYV-----FL----- 1040 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSS-SCEEEECSSSBEEEEETTTTEEE-----CC-----
T ss_pred CCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCceE-----EE-----
Confidence 0011111111 1235788999999999999 99999999999999999987533 11
Q ss_pred cCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC
Q 014644 236 SHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 315 (421)
Q Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 315 (421)
..|...+.+++|+|++.+++.+.++.|++||+.+ ++....+.+|...+ .+++|+|+
T Consensus 1041 --------~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v---------------~~~~~s~d 1096 (1249)
T 3sfz_A 1041 --------QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVIT-GRIERDFTCHQGTV---------------LSCAISSD 1096 (1249)
T ss_dssp --------BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTT-TCCCEEEECCSSCC---------------CCEEECSS
T ss_pred --------ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCC-CceeEEEcccCCcE---------------EEEEECCC
Confidence 2347889999999988666555669999999986 88888898888765 79999999
Q ss_pred CCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccc---
Q 014644 316 GLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELS--- 389 (421)
Q Consensus 316 ~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~--- 389 (421)
++++++++.||.|++||+.++ .....+.+|...+.+++|+|+ + ..|++|+.||. ++|+ .++.....
T Consensus 1097 ~~~l~s~s~d~~v~iwd~~~~-~~~~~l~~h~~~v~~~~~s~d--g-----~~lat~~~dg~i~vwd~~~~~~~~~~~~~ 1168 (1249)
T 3sfz_A 1097 ATKFSSTSADKTAKIWSFDLL-SPLHELKGHNGCVRCSAFSLD--G-----ILLATGDDNGEIRIWNVSDGQLLHSCAPI 1168 (1249)
T ss_dssp SSSCEEECCSSCCCEECSSSS-SCSBCCCCCSSCEEEEEECSS--S-----SEEEEEETTSCCCEEESSSSCCCCCCCCC
T ss_pred CCEEEEEcCCCcEEEEECCCc-ceeeeeccCCCcEEEEEECCC--C-----CEEEEEeCCCEEEEEECCCCceEEEeccc
Confidence 999999999999999999987 667888999999999999998 3 48999999999 9993 33333322
Q ss_pred ------cccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 390 ------YNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 390 ------~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
..|...|++++|+||+++|++++ +.+++|+.
T Consensus 1169 ~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-g~v~vwd~ 1205 (1249)
T 3sfz_A 1169 SVEEGTATHGGWVTDVCFSPDSKTLVSAG-GYLKWWNV 1205 (1249)
T ss_dssp C-------CCSCCCEEEECTTSSCEEEES-SSEEEBCS
T ss_pred cccccccccCceEEEEEECCCCCEEEECC-CeEEEEEC
Confidence 46788999999999999999887 78999973
No 45
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-35 Score=295.43 Aligned_cols=355 Identities=8% Similarity=0.022 Sum_probs=240.1
Q ss_pred cccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 27 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 27 ~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
....+|.+.|++++| +|++.+||+|+.||+|+||+..+.+... ...+..+|.+++|.+ +.+++
T Consensus 11 ~~~~gh~~~V~~laf--spdg~~lAsgs~Dg~I~lw~~~~~~~~~--~~~~~~~V~~l~fsp-------------g~~L~ 73 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAF--DFTQNLLAIATVTGEVHIYGQQQVEVVI--KLEDRSAIKEMRFVK-------------GIYLV 73 (902)
T ss_dssp EEEEECSSCEEEEEE--ETTTTEEEEEETTSEEEEECSTTCEEEE--ECSSCCCEEEEEEET-------------TTEEE
T ss_pred ccccCCCCCcEEEEE--CCCCCEEEEEeCCCEEEEEeCCCcEEEE--EcCCCCCEEEEEEcC-------------CCEEE
Confidence 345689999999999 7999999999999999999988765322 233455555555543 33445
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCC-----
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP----- 180 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~----- 180 (421)
.++. ++.+++|++.+. +++..+ . |.+.|++++|+|++++|++| .||+|++||++ ..++. .+.+..
T Consensus 74 S~s~--D~~v~lWd~~~~---~~~~~~-~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~-~~~~~-~~~i~~~~~~~ 144 (902)
T 2oaj_A 74 VINA--KDTVYVLSLYSQ---KVLTTV-F-VPGKITSIDTDASLDWMLIGLQNGSMIVYDID-RDQLS-SFKLDNLQKSS 144 (902)
T ss_dssp EEET--TCEEEEEETTTC---SEEEEE-E-CSSCEEEEECCTTCSEEEEEETTSCEEEEETT-TTEEE-EEEECCHHHHH
T ss_pred EEEC--cCeEEEEECCCC---cEEEEE-c-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC-CCccc-cceeccccccc
Confidence 5443 678999999887 777777 3 67899999999999999999 99999999998 44432 111100
Q ss_pred CCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhcccccc--CC---CcccccccccceeEEEE
Q 014644 181 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAES--HG---SKSFFTEIIASISDIKF 255 (421)
Q Consensus 181 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~--~~---~~~~~~~~~~~v~~~~~ 255 (421)
..+.+|.+.|.+++|+|++...|++++.|+.| +||+++++.. +.+..|... +. .......|...|.+++|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIK----QSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEE----EEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceE----EEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 23477999999999999743789999999999 9999987643 333332000 00 00123445678999999
Q ss_pred cCCCCEEEEecC-CeEEEEECCCCCcceeE--E---eec-------------cCccccccc--------------c-cCC
Q 014644 256 ANDGQHLLSRDY-MNLKLWDIRMDSTPVAT--F---KIH-------------EHLRPKLCD--------------L-YNN 301 (421)
Q Consensus 256 s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~--~---~~~-------------~~~~~~~~~--------------~-~~~ 301 (421)
+|+|++|++++. +.|++||+++ ++++.. + ..| ...+..++. . ...
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~-g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANS-GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTT-CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred cCCCCEEEEEECCCeEEEEECCC-CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 999999999876 9999999986 555432 1 011 111111100 0 000
Q ss_pred C----cc--e-----------------------------------eeeEEEEcC----------CCCEEEEeeCCCeEEE
Q 014644 302 D----SI--F-----------------------------------DKFECSVSG----------DGLHFATGSYSNLLRI 330 (421)
Q Consensus 302 ~----~~--~-----------------------------------~~~~~~~sp----------~~~~l~~~s~dg~i~i 330 (421)
+ .+ + .+.++++.+ ++..+++++.||.|++
T Consensus 299 ~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~ 378 (902)
T 2oaj_A 299 RGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET 378 (902)
T ss_dssp TSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEE
T ss_pred CCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEE
Confidence 0 00 0 012333333 2346777888889999
Q ss_pred EecCCCCCcee----------------------------------------EEecCCCCccceeeecCCcccccccceee
Q 014644 331 FSHGVGSAGGI----------------------------------------TVEAGKNENRKPILQAAPRARRSSLSNLT 370 (421)
Q Consensus 331 wd~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 370 (421)
||+.++..... .+.+|...+..++|+|+ ...|+
T Consensus 379 ~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spd-------g~~la 451 (902)
T 2oaj_A 379 MLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEY-------GTAFI 451 (902)
T ss_dssp EETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSE-------EEEEE
T ss_pred EECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccccc-------CcEEE
Confidence 99865521111 13344555555666665 44899
Q ss_pred eecccCc-ccCCCCC-cccc-------c-----cccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 371 RGLYRQA-HENSSSG-HHEL-------S-----YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 371 ~g~~d~~-~iw~~~~-~~~~-------~-----~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
+|+.|+. ++|+... .+.. . .+|...|++++|+||+++||+|+ ++.++||+
T Consensus 452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd 516 (902)
T 2oaj_A 452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFK 516 (902)
T ss_dssp EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEE
Confidence 9999999 9994322 1111 0 16788999999999999999999 56699997
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.6e-35 Score=266.16 Aligned_cols=247 Identities=13% Similarity=0.155 Sum_probs=194.2
Q ss_pred ccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeee
Q 014644 28 KSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 107 (421)
Q Consensus 28 ~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (421)
...+|...|++++| +|++ .+++++.||+|+|||+.+++....
T Consensus 89 ~~~~~~~~V~~~~~--s~d~-~~l~~s~dg~v~lWd~~~~~~~~~----------------------------------- 130 (357)
T 4g56_B 89 AGVQTEAGVTDVAW--VSEK-GILVASDSGAVELWEILEKESLLV----------------------------------- 130 (357)
T ss_dssp EEEECSSCEEEEEE--ETTT-EEEEEETTSCEEEC--------CC-----------------------------------
T ss_pred ccCCCCCCEEEEEE--cCCC-CEEEEECCCEEEEeeccccceeEE-----------------------------------
Confidence 34578999999999 4665 566788999999999987651111
Q ss_pred cccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 108 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
..... .+|...|++++|+|++++|+++ .|++|++||++ .++.+..+ .+|
T Consensus 131 ---------------------~~~~~-~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~-~~~~~~~~-------~~h 180 (357)
T 4g56_B 131 ---------------------NKFAK-YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS-QKAVLKSY-------NAH 180 (357)
T ss_dssp ---------------------CCEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TTEEEEEE-------CCC
T ss_pred ---------------------Eeecc-CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-CCcEEEEE-------cCC
Confidence 00112 5899999999999999999999 99999999998 56666554 789
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC-CEEEEe
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG-QHLLSR 265 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~ 265 (421)
...|.+++|+|++..++++++.|++|++||+++++.. ..+.. ..+...+.+++|+|++ .+|++|
T Consensus 181 ~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~----~~~~~-----------~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 181 SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA----TRIDF-----------CASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB----CBCCC-----------TTCCSCEEEEEECTTSTTEEEEE
T ss_pred CCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee----eeeee-----------ccccccccchhhhhcccceEEEe
Confidence 9999999999998568999999999999999987543 11111 2235679999999974 577787
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEEeeCCCeEEEEecCCCCCceeEE
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGSYSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~~s~dg~i~iwd~~~~~~~~~~~ 343 (421)
+. +.|++||+++ ++.+..+.+|...+ .+++|+|++ ++|++|+.||+|+|||++++ + ....
T Consensus 246 ~~d~~i~~wd~~~-~~~~~~~~~~~~~v---------------~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-~-~~~~ 307 (357)
T 4g56_B 246 DETGNVSLVNIKN-PDSAQTSAVHSQNI---------------TGLAYSYHSSPFLASISEDCTVAVLDADFS-E-VFRD 307 (357)
T ss_dssp ESSSCEEEEESSC-GGGCEEECCCSSCE---------------EEEEECSSSSCCEEEEETTSCEEEECTTSC-E-EEEE
T ss_pred ecccceeEEECCC-CcEeEEEeccceeE---------------EEEEEcCCCCCEEEEEeCCCEEEEEECCCC-c-EeEE
Confidence 65 9999999986 88888898888765 799999987 67999999999999999876 3 3345
Q ss_pred ecCCCCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 344 EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
.+|.+.|.+++|+|.. ...|++++.|+. ++|+
T Consensus 308 ~~H~~~V~~vafsP~d------~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 308 LSHRDFVTGVAWSPLD------HSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp CCCSSCEEEEEECSSS------TTEEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEEeCCC------CCEEEEEcCCCeEEEEE
Confidence 5899999999999831 238999999999 9993
No 47
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-34 Score=262.11 Aligned_cols=247 Identities=14% Similarity=0.160 Sum_probs=203.0
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
++.+.+ .+|.+.|.+++|+|++++|+++ .|++|++||+. .+.....+ ..|...|.+++|+|++ .+|+++
T Consensus 46 ~~~~~l-~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~-~~~~~~~~-------~~~~~~v~~~~~s~~~-~~l~s~ 115 (340)
T 1got_B 46 RTRRTL-RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSY-TTNKVHAI-------PLRSSWVMTCAYAPSG-NYVACG 115 (340)
T ss_dssp CEEEEE-CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-TCCEEEEE-------ECSSSCEEEEEECTTS-SEEEEE
T ss_pred hhheee-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC-CCCcceEe-------ecCCccEEEEEECCCC-CEEEEE
Confidence 556677 8999999999999999999999 99999999998 45555444 6788999999999999 999999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEe
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFK 286 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~ 286 (421)
+.|+.|++||+.++......... +.+|...+.++.|++++.++.++.++.|++||+++ ++.+..+.
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~ 181 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVSRE-------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET-GQQTTTFT 181 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEEEE-------------EECCSSCEEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEEC
T ss_pred eCCCeEEEEECccCCCcceeEEE-------------ecCCCccEEEEEECCCCcEEEEECCCcEEEEECCC-CcEEEEEc
Confidence 99999999999875322111122 34458899999999988744444559999999987 88888888
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCccccccc
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSL 366 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (421)
+|...+ .+++|+|+++++++|+.||.|++||++++ .....+.+|...+..++|+|+ .
T Consensus 182 ~h~~~v---------------~~~~~~~~~~~l~sg~~d~~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~-------~ 238 (340)
T 1got_B 182 GHTGDV---------------MSLSLAPDTRLFVSGACDASAKLWDVREG-MCRQTFTGHESDINAICFFPN-------G 238 (340)
T ss_dssp CCSSCE---------------EEEEECTTSSEEEEEETTSCEEEEETTTC-SEEEEECCCSSCEEEEEECTT-------S
T ss_pred CCCCce---------------EEEEECCCCCEEEEEeCCCcEEEEECCCC-eeEEEEcCCcCCEEEEEEcCC-------C
Confidence 888765 79999999999999999999999999987 677889999999999999998 3
Q ss_pred ceeeeecccCc-ccCCCC--Cccccc--cccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 367 SNLTRGLYRQA-HENSSS--GHHELS--YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 367 ~~l~~g~~d~~-~iw~~~--~~~~~~--~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
..|++|+.|+. ++|+.. ..+... ..+...|.+++|+|++++|++|+ ++.+++|+.
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 48999999999 999432 222211 12335799999999999999999 556999974
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-35 Score=263.07 Aligned_cols=246 Identities=13% Similarity=0.097 Sum_probs=189.2
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|++.|++++| ++++++||+|+.|++|+|||+.++..
T Consensus 10 ~~H~~~V~~v~~--s~~g~~lasgs~D~~v~lwd~~~~~~---------------------------------------- 47 (316)
T 3bg1_A 10 TSHEDMIHDAQM--DYYGTRLATCSSDRSVKIFDVRNGGQ---------------------------------------- 47 (316)
T ss_dssp ----CCEEEEEE--CGGGCEEEEEETTTEEEEEEEETTEE----------------------------------------
T ss_pred ccccCeEEEeeE--cCCCCEEEEEeCCCeEEEEEecCCCc----------------------------------------
Confidence 479999999999 78999999999999999999876531
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecC--CCCEEEEE-cCCcEEEEeCCCCc-eeeeeeecCCCCCCc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISD-QCFNIVDMKPSNMDD 185 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~-~d~~i~lwd~~~~~-~~~~~~~~~~~~~~~ 185 (421)
.++..+ .+|.+.|.+++|+| ++++|+++ .|++|++||++... ..... +.+
T Consensus 48 ------------------~~~~~l-~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-------~~~ 101 (316)
T 3bg1_A 48 ------------------ILIADL-RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE-------HAG 101 (316)
T ss_dssp ------------------EEEEEE-ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE-------ECC
T ss_pred ------------------EEEEEE-cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE-------ccC
Confidence 223345 79999999999986 48999998 99999999998432 22222 368
Q ss_pred cCCCeeEEEEecC--CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC-----
Q 014644 186 LTEVITSAEFHPI--YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND----- 258 (421)
Q Consensus 186 ~~~~v~~~~~~p~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~----- 258 (421)
|...|.+++|+|+ + .+|++++.|++|++||++.+.... ....+ ..|...+.+++|+|+
T Consensus 102 h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~~~-~~~~~-------------~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 102 HDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQWE-VKKIN-------------NAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSCEE-ECCBT-------------TSSSSCBCCCEECCCCCC--
T ss_pred CCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCCcc-eeeee-------------ccccCCcceEEEccccCCcc
Confidence 9999999999998 6 899999999999999998753110 01222 335778999999997
Q ss_pred ------------CCEEEEecC-CeEEEEECCCCC--cceeEEeeccCcccccccccCCCcceeeeEEEEcCCC----CEE
Q 014644 259 ------------GQHLLSRDY-MNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG----LHF 319 (421)
Q Consensus 259 ------------~~~l~~~~~-~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~l 319 (421)
+++|++++. +.|++||++..+ +++..+.+|...+ .+++|+|++ ++|
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V---------------~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV---------------RDVAWAPSIGLPTSTI 231 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE---------------EEEECCCCSSCSCCEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce---------------EEEEecCCCCCCCceE
Confidence 468888875 999999997422 3556677787755 799999986 889
Q ss_pred EEeeCCCeEEEEecCCCC---CceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC
Q 014644 320 ATGSYSNLLRIFSHGVGS---AGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 320 ~~~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
++++.||+|++|++.+.. .....+..|...+..++|+|+ +..|++++.|+. ++|
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~-------g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT-------ANILAVSGGDNKVTLW 289 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTT-------TCCEEEEESSSCEEEE
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCC-------CCEEEEEcCCCeEEEE
Confidence 999999999999998631 223456677778888888877 337788888887 888
No 49
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.8e-34 Score=268.48 Aligned_cols=306 Identities=13% Similarity=0.192 Sum_probs=239.7
Q ss_pred ccccccE-EEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKI-NRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V-~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|.+.| .++.+ ++++|++|+.||+|++||+.+++..... ..|...|.++++. ...+..+
T Consensus 115 ~~h~~~v~~~~~~----~g~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--------------~~~l~s~ 175 (445)
T 2ovr_B 115 KGHDDHVITCLQF----CGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMR--------------DNIIISG 175 (445)
T ss_dssp ECSTTSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEE--------------TTEEEEE
T ss_pred cccCCCcEEEEEE----cCCEEEEEECCCcEEEEECCCCcEEEEE-cCCCCCEEEEEec--------------CCEEEEE
Confidence 3687764 55554 4789999999999999999988733222 2345555544442 2244555
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
+. ++.+++|+..+. +++..+ .+|...|.+++|+ ++.|+++ .|++|++||+. .++....+ .+|.
T Consensus 176 ~~--dg~i~vwd~~~~---~~~~~~-~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~-~~~~~~~~-------~~~~ 239 (445)
T 2ovr_B 176 ST--DRTLKVWNAETG---ECIHTL-YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIE-TGQCLHVL-------MGHV 239 (445)
T ss_dssp ET--TSCEEEEETTTT---EEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESS-SCCEEEEE-------ECCS
T ss_pred eC--CCeEEEEECCcC---cEEEEE-CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECC-CCcEEEEE-------cCCc
Confidence 44 668999999887 888888 8999999999995 5778888 99999999998 45555544 6789
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 267 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (421)
..|.+++| ++ ..+++++.|+.|++||+++++.. ..+.. |...+.+++| ++.++++++.
T Consensus 240 ~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~----~~~~~-------------~~~~v~~~~~--~~~~l~~~~~ 297 (445)
T 2ovr_B 240 AAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCL----HTLQG-------------HTNRVYSLQF--DGIHVVSGSL 297 (445)
T ss_dssp SCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEE----EEECC-------------CSSCEEEEEE--CSSEEEEEET
T ss_pred ccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEe----EEecC-------------CCCceEEEEE--CCCEEEEEeC
Confidence 99999999 56 88999999999999999886543 33333 4778999999 7889998875
Q ss_pred -CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec-
Q 014644 268 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA- 345 (421)
Q Consensus 268 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~- 345 (421)
+.|++||+++ ++.+..+.+|...+ .++.+ +++++++|+.||.|++||++++ .....+.+
T Consensus 298 d~~i~i~d~~~-~~~~~~~~~~~~~v---------------~~~~~--~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~ 358 (445)
T 2ovr_B 298 DTSIRVWDVET-GNCIHTLTGHQSLT---------------SGMEL--KDNILVSGNADSTVKIWDIKTG-QCLQTLQGP 358 (445)
T ss_dssp TSCEEEEETTT-CCEEEEECCCCSCE---------------EEEEE--ETTEEEEEETTSCEEEEETTTC-CEEEEECST
T ss_pred CCeEEEEECCC-CCEEEEEcCCcccE---------------EEEEE--eCCEEEEEeCCCeEEEEECCCC-cEEEEEccC
Confidence 9999999987 88888888877643 44444 6779999999999999999887 56667765
Q ss_pred --CCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccc-----cccccCeEEEEEccCCCeEEEecCCc
Q 014644 346 --GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELS-----YNLSSKLLHLAWHPTTNLIACANGNS 415 (421)
Q Consensus 346 --~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~-----~~~~~~v~~~~~spd~~~la~~~~~~ 415 (421)
|..++.++.+.+. .|++|+.||. ++|+ .++.+... .++...|++++|+|++.+||+|+.|+
T Consensus 359 ~~~~~~v~~~~~~~~---------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 359 NKHQSAVTCLQFNKN---------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp TSCSSCEEEEEECSS---------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCCCCCEEEEEECCC---------EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 8888999988654 8999999999 9993 34444333 36778899999999999999999655
Q ss_pred -----eEEEe
Q 014644 416 -----LFFHY 420 (421)
Q Consensus 416 -----~~i~~ 420 (421)
+++|+
T Consensus 430 ~~~~~l~v~d 439 (445)
T 2ovr_B 430 TEETKLLVLD 439 (445)
T ss_dssp SSCCEEEEEE
T ss_pred CCccEEEEEE
Confidence 88886
No 50
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-34 Score=253.59 Aligned_cols=271 Identities=17% Similarity=0.129 Sum_probs=220.3
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +++++|++++.||.|++||+.+++
T Consensus 15 ~~h~~~v~~~~~---~~~~~l~s~~~dg~v~vw~~~~~~----------------------------------------- 50 (313)
T 3odt_A 15 KGHDQDVRDVVA---VDDSKVASVSRDGTVRLWSKDDQW----------------------------------------- 50 (313)
T ss_dssp CCCSSCEEEEEE---EETTEEEEEETTSEEEEEEESSSE-----------------------------------------
T ss_pred hCCCCCcEEEEe---cCCCEEEEEEcCCcEEEEECCCCE-----------------------------------------
Confidence 368899999999 568899999999999999997654
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCc--eeeeeeecCCCCCCcc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD--QCFNIVDMKPSNMDDL 186 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~--~~~~~~~~~~~~~~~~ 186 (421)
....+ ..|...|.+++|+|++++|+++ .|+.|++|++.... +... .+.+|
T Consensus 51 -------------------~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-------~~~~~ 103 (313)
T 3odt_A 51 -------------------LGTVV-YTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLY-------TLIGH 103 (313)
T ss_dssp -------------------EEEEE-EECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-C-------EECCC
T ss_pred -------------------EEEEe-ecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCccc-------chhhc
Confidence 11223 5688899999999999999999 99999999987432 2232 33789
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEe
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSR 265 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 265 (421)
...|.+++| ++ ..+++++.|+.|++||.. ... ..+.. |...+.+++|.| ++.+++++
T Consensus 104 ~~~i~~~~~--~~-~~l~~~~~d~~i~~~d~~--~~~----~~~~~-------------~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 104 QGNVCSLSF--QD-GVVISGSWDKTAKVWKEG--SLV----YNLQA-------------HNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp SSCEEEEEE--ET-TEEEEEETTSEEEEEETT--EEE----EEEEC-------------CSSCEEEEEEEETTTTEEEEE
T ss_pred ccCEEEEEe--cC-CEEEEEeCCCCEEEEcCC--cEE----Eeccc-------------CCCceeEEEEccCCCCEEEEE
Confidence 999999999 45 789999999999999922 211 23333 478899999998 89999988
Q ss_pred cC-CeEEEEECCCCCcceeEEee-ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEE
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKI-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 343 (421)
+. +.|++||. .+....+.. +...+ .+++|+|++. +++++.||.|++||++++ .....+
T Consensus 162 ~~d~~i~i~d~---~~~~~~~~~~~~~~i---------------~~~~~~~~~~-~~~~~~dg~i~i~d~~~~-~~~~~~ 221 (313)
T 3odt_A 162 SADKTIKLWQN---DKVIKTFSGIHNDVV---------------RHLAVVDDGH-FISCSNDGLIKLVDMHTG-DVLRTY 221 (313)
T ss_dssp ETTSCEEEEET---TEEEEEECSSCSSCE---------------EEEEEEETTE-EEEEETTSEEEEEETTTC-CEEEEE
T ss_pred ECCCCEEEEec---CceEEEEeccCcccE---------------EEEEEcCCCe-EEEccCCCeEEEEECCch-hhhhhh
Confidence 76 99999993 555666665 55443 7999999998 899999999999999987 677888
Q ss_pred ecCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 344 EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
.+|..++..++|+|+ . .|++++.|+. ++|+ .++.......+...|.+++|+|++++++++.++.+++|+
T Consensus 222 ~~~~~~i~~~~~~~~-------~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 222 EGHESFVYCIKLLPN-------G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp ECCSSCEEEEEECTT-------S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred hcCCceEEEEEEecC-------C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 999999999999988 2 4889999999 9994 445555666788899999999999977766688899997
Q ss_pred C
Q 014644 421 A 421 (421)
Q Consensus 421 ~ 421 (421)
.
T Consensus 294 ~ 294 (313)
T 3odt_A 294 Q 294 (313)
T ss_dssp S
T ss_pred C
Confidence 4
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-33 Score=255.13 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=225.6
Q ss_pred cccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCce----eEEeeecCCCCCcccccccccccceeeccCCC
Q 014644 25 DYLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK----VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP 100 (421)
Q Consensus 25 ~~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 100 (421)
..+...+|.+.|++++| ++++++|++++ ||.|++||+.+++ ...+....+.. .+.++.+++
T Consensus 43 ~~~~~~~h~~~v~~~~~--~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~ 107 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTI--SNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDN------------YIRSCKLLP 107 (337)
T ss_dssp EEEEEECCSSCCCEEEE--CSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTS------------BEEEEEECT
T ss_pred ccceeccCCCceEEEEE--ecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCC------------cEEEEEEcC
Confidence 34455689999999999 78999999999 9999999998764 12222123333 455566666
Q ss_pred CceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecC
Q 014644 101 SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK 179 (421)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~ 179 (421)
+...+..++. ++.+++|+..... ......+ ..|...|.+++|+|++++|+++ .|+.|++||++ .++....+
T Consensus 108 ~~~~l~~~~~--d~~i~~~d~~~~~-~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~--- 179 (337)
T 1gxr_A 108 DGCTLIVGGE--ASTLSIWDLAAPT-PRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH-NQTLVRQF--- 179 (337)
T ss_dssp TSSEEEEEES--SSEEEEEECCCC---EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEE---
T ss_pred CCCEEEEEcC--CCcEEEEECCCCC-cceeeec-ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC-CCceeeee---
Confidence 6666666654 5689999998762 1245555 7899999999999999999999 99999999998 55555544
Q ss_pred CCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC
Q 014644 180 PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 259 (421)
Q Consensus 180 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (421)
..|...|.+++|+|++ ..|++++.|+.|++||+++++.. ..+. +...+.+++|+|++
T Consensus 180 ----~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~----~~~~--------------~~~~v~~~~~s~~~ 236 (337)
T 1gxr_A 180 ----QGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQL----QQHD--------------FTSQIFSLGYCPTG 236 (337)
T ss_dssp ----CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE----EEEE--------------CSSCEEEEEECTTS
T ss_pred ----ecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceE----eeec--------------CCCceEEEEECCCC
Confidence 6788999999999999 99999999999999999987543 2222 25689999999999
Q ss_pred CEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 260 QHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 260 ~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
+++++++. +.|++||++. ++. ..+..|...+ .+++|+|++++|++++.||.|++||+.++..
T Consensus 237 ~~l~~~~~~~~i~~~~~~~-~~~-~~~~~~~~~v---------------~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 237 EWLAVGMESSNVEVLHVNK-PDK-YQLHLHESCV---------------LSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp SEEEEEETTSCEEEEETTS-SCE-EEECCCSSCE---------------EEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CEEEEEcCCCcEEEEECCC-CCe-EEEcCCccce---------------eEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 99999876 9999999985 443 4555666544 7999999999999999999999999998733
Q ss_pred ceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC
Q 014644 339 GGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
. ....|...+..+.|+++ ...|++++.|+. ++|
T Consensus 300 -~-~~~~~~~~v~~~~~s~~-------~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 300 -I-FQSKESSSVLSCDISVD-------DKYIVTGSGDKKATVY 333 (337)
T ss_dssp -E-EEEECSSCEEEEEECTT-------SCEEEEEETTSCEEEE
T ss_pred -E-EEecCCCcEEEEEECCC-------CCEEEEecCCCeEEEE
Confidence 2 44568899999999998 348999999998 888
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=271.55 Aligned_cols=337 Identities=14% Similarity=0.121 Sum_probs=226.5
Q ss_pred ccccccEEEEEEEEcC-CCCeEEEEeCCCcEEEeecCC---ce-eEEeeecCCCCCcccccccccccceeeccCCCCcee
Q 014644 30 LEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRD---QK-VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH 104 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~-~~~~l~t~s~d~~v~lwd~~~---~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 104 (421)
.+|.+.|++++| +| ++.+|++|+.||+|+|||+.+ +. ........+... +.++.+.++...
T Consensus 60 ~~h~~~V~~~~~--s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~------------v~~~~~~~~~~~ 125 (437)
T 3gre_A 60 ENEPNSITSSAV--SPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSST------------VTQITMIPNFDA 125 (437)
T ss_dssp TTTTSCEEEEEE--ECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSC------------EEEEEECTTSSE
T ss_pred cCCCCceEEEEE--CCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCC------------EEEEEEeCCCCE
Confidence 368899999999 67 899999999999999999876 33 111222234454 455555556666
Q ss_pred eeecccccccceeEEeecccceeeeeeee--------c-CC--CCcceEEEe--ecCCCCEEEEE-cCCcEEEEeCCCCc
Q 014644 105 GYHLEWTENMATKIANVGNSVHARCQKVY--------P-HA--HDFNINSIS--NNSDCETFVSA-DDLRINLWNLEISD 170 (421)
Q Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~--h~~~v~~l~--~~~~~~~l~s~-~d~~i~lwd~~~~~ 170 (421)
++.++. ++.+++|+++....+++.+.+ . .. +...+.++. +++++.+|+++ .|+.|++||++ ..
T Consensus 126 l~s~s~--dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~ 202 (437)
T 3gre_A 126 FAVSSK--DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR-TL 202 (437)
T ss_dssp EEEEET--TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT-TC
T ss_pred EEEEeC--CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CC
Confidence 666655 578999998632222333322 0 11 455666666 56789999999 99999999998 45
Q ss_pred eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccce
Q 014644 171 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v 250 (421)
+.+..+. ...|...|.+++|+|++ .+|++++.||.|++||++.++.. ..+.. .|...|
T Consensus 203 ~~~~~~~-----~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~----~~~~~------------~~~~~v 260 (437)
T 3gre_A 203 ERLQIIE-----NSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLI----RSWSF------------GDHAPI 260 (437)
T ss_dssp CEEEEEE-----CCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEE----EEEBC------------TTCEEE
T ss_pred eeeEEEc-----cCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEE----EEEec------------CCCCce
Confidence 5555441 12288999999999998 99999999999999999986543 32221 125689
Q ss_pred eEEEEc----CCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCccccccccc-----------CCCcceeeeEEEEcC
Q 014644 251 SDIKFA----NDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLY-----------NNDSIFDKFECSVSG 314 (421)
Q Consensus 251 ~~~~~s----~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~sp 314 (421)
.+++|+ |++.+|++++. +.|++||+++ ++.+..+.+|...+....... .......+.+++|+
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 999555 56889999876 9999999986 888888887765443221100 00011124789999
Q ss_pred CCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCcccee---eecCCcccccccceeeeecccCcccCCCCCccccccc
Q 014644 315 DGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPI---LQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYN 391 (421)
Q Consensus 315 ~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~ 391 (421)
++++|++|+.||.|++||+.++ .....+.+|........ +.+. ...++... + . ..+........
T Consensus 339 ~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~--~--~~~~~~~~~~~ 405 (437)
T 3gre_A 339 NDKILLTDEATSSIVMFSLNEL-SSSKAVISPSRFSDVFIPTQVTAN-------LTMLLRKM-K--R--TSTHSVDDSLY 405 (437)
T ss_dssp TTEEEEEEGGGTEEEEEETTCG-GGCEEEECC--CCCEEEEEEEETT-------EEEEEEEC-C----------------
T ss_pred CceEEEecCCCCeEEEEECCCc-ccceEEecccccCceEEEEEeecc-------eEEEEEec-c--c--ccccccCcccc
Confidence 7799999999999999999987 66677777754432222 2222 11222220 0 0 11112233345
Q ss_pred cccCeEEEEEccC--CCeEEEec-CCceEEEe
Q 014644 392 LSSKLLHLAWHPT--TNLIACAN-GNSLFFHY 420 (421)
Q Consensus 392 ~~~~v~~~~~spd--~~~la~~~-~~~~~i~~ 420 (421)
|...|++++|+++ +.+|++|+ ++.|+||+
T Consensus 406 h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 406 HHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999999 77899998 56699995
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.3e-34 Score=267.63 Aligned_cols=289 Identities=12% Similarity=0.176 Sum_probs=227.0
Q ss_pred ccccccE-EEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKI-NRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V-~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...| .++.+ ++++|++|+.||+|++||+.+++
T Consensus 118 ~~h~~~v~~~~~~----~~~~l~sgs~dg~i~vwd~~~~~---------------------------------------- 153 (464)
T 3v7d_B 118 RGHMTSVITCLQF----EDNYVITGADDKMIRVYDSINKK---------------------------------------- 153 (464)
T ss_dssp ECCSSSCEEEEEE----ETTEEEEEETTSCEEEEETTTTE----------------------------------------
T ss_pred cCCCCCcEEEEEE----CCCEEEEEcCCCcEEEEECCCCc----------------------------------------
Confidence 3677774 66665 36799999999999999988754
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
++..+ .+|.+.|.+++|+|++ +|++| .|++|++||++ .++....+ .+|.
T Consensus 154 --------------------~~~~~-~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~-~~~~~~~~-------~~h~ 203 (464)
T 3v7d_B 154 --------------------FLLQL-SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK-KGCCTHVF-------EGHN 203 (464)
T ss_dssp --------------------EEEEE-CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT-TTEEEEEE-------CCCS
T ss_pred --------------------EEEEE-eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC-CCcEEEEE-------CCCC
Confidence 23334 6899999999999988 88888 99999999998 55666554 7899
Q ss_pred CCeeEEEEec--CCCCeEEEEEcCCeEEEEECCcccccccchhh------hccccccCCCcccccccccceeEEEEcCCC
Q 014644 188 EVITSAEFHP--IYCNLLAYSSSRGFVRLVDMRQSALCDHSARI------LRDAAESHGSKSFFTEIIASISDIKFANDG 259 (421)
Q Consensus 188 ~~v~~~~~~p--~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~------~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (421)
..|.+++|++ ++ .++++++.|+.|++||++++......... +......+.....+.+|...+.++ ++++
T Consensus 204 ~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~ 280 (464)
T 3v7d_B 204 STVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHG 280 (464)
T ss_dssp SCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEET
T ss_pred CccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCC
Confidence 9999999994 66 89999999999999999986532110000 000000111122345667777776 5778
Q ss_pred CEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 260 QHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 260 ~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
+++++++. +.|++||+++ ++++..+.+|...+ .+++|+|+++++++|+.||.|++||+.++ .
T Consensus 281 ~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v---------------~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~ 343 (464)
T 3v7d_B 281 NIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRI---------------YSTIYDHERKRCISASMDTTIRIWDLENG-E 343 (464)
T ss_dssp TEEEEEETTSCEEEEETTT-TEEEEEECCCSSCE---------------EEEEEETTTTEEEEEETTSCEEEEETTTT-E
T ss_pred CEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCE---------------EEEEEcCCCCEEEEEeCCCcEEEEECCCC-c
Confidence 99999876 9999999986 88888888887755 79999999999999999999999999987 7
Q ss_pred ceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCCc-cccccccccCeEEEEEccCCCeEEEecCCce
Q 014644 339 GGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGH-HELSYNLSSKLLHLAWHPTTNLIACANGNSL 416 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~-~~~~~~~~~~v~~~~~spd~~~la~~~~~~~ 416 (421)
....+.+|...+..+.+++. .|++++.|+. ++|+.... ......+...+..++|+|++++|++++++.+
T Consensus 344 ~~~~~~~h~~~v~~~~~~~~---------~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i 414 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSDK---------FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 414 (464)
T ss_dssp EEEEECCCSSCEEEEEECSS---------EEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEE
T ss_pred EEEEEeCCCCcEEEEEEcCC---------EEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeE
Confidence 78889999999999999855 8999999999 99944332 2222345667888999999999999999999
Q ss_pred EEEeC
Q 014644 417 FFHYA 421 (421)
Q Consensus 417 ~i~~~ 421 (421)
++|+.
T Consensus 415 ~iwd~ 419 (464)
T 3v7d_B 415 NIYNL 419 (464)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99974
No 54
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-34 Score=264.71 Aligned_cols=301 Identities=13% Similarity=0.136 Sum_probs=226.3
Q ss_pred ccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCc---eeEEeeecCCCCCcccccccccccceeeccCCCCc
Q 014644 26 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ---KVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSF 102 (421)
Q Consensus 26 ~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 102 (421)
.+..+.|...|++++| ++++.+|++++.|+.|++||+.+. .........+...|.+++|.+.. .
T Consensus 60 ~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----------~ 126 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDW--SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-----------D 126 (416)
T ss_dssp CSCCCCCSSCEEEEEE--CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-----------T
T ss_pred EEEEEecCCceEEEEE--CCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-----------C
Confidence 4455679999999999 789999999999999999999872 11122222355555555544331 4
Q ss_pred eeeeecccccccceeEEeecccc------eeeeeeeecCCCCcceEEEeecCC-CCEEEEE-cCCcEEEEeCCCCceeee
Q 014644 103 AHGYHLEWTENMATKIANVGNSV------HARCQKVYPHAHDFNINSISNNSD-CETFVSA-DDLRINLWNLEISDQCFN 174 (421)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~-~d~~i~lwd~~~~~~~~~ 174 (421)
..++.++. ++.+++|++.... .......+ .+|...|.+++|+|+ +.+|+++ .|+.|++||++ ..+...
T Consensus 127 ~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~-~~~~~~ 202 (416)
T 2pm9_A 127 NVLASGGN--NGEIFIWDMNKCTESPSNYTPLTPGQS-MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK-AKKEVI 202 (416)
T ss_dssp TBEEEECS--SSCEEBCBTTTTSSCTTTCCCBCCCCS-CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT-TTEEEE
T ss_pred CEEEEEcC--CCeEEEEECCCCccccccccccccccc-cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC-CCCcce
Confidence 44555543 5679999998763 11222333 689999999999999 7899998 99999999998 455555
Q ss_pred eeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC---eEEEEECCcccccccchhhhccccccCCCccccccccccee
Q 014644 175 IVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG---FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASIS 251 (421)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~---~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~ 251 (421)
.+... ....+|...|.+++|+|++..++++++.|+ .|++||++++... ...+. ..|...|.
T Consensus 203 ~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~------------~~~~~~v~ 266 (416)
T 2pm9_A 203 HLSYT-SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLN------------QGHQKGIL 266 (416)
T ss_dssp EECCC-CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCC------------SCCSSCEE
T ss_pred EEecc-ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEee------------cCccCcee
Confidence 44211 111234789999999999757899999998 9999999985321 12333 03478999
Q ss_pred EEEEcC-CCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEEeeCCCeE
Q 014644 252 DIKFAN-DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGSYSNLL 328 (421)
Q Consensus 252 ~~~~s~-~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~~s~dg~i 328 (421)
+++|+| ++++|++++. +.|++||+++ ++++..+..|...+ .+++|+|++ ++|++++.||.|
T Consensus 267 ~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~v---------------~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPARGNWC---------------FKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp EEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEECSSSCC---------------CCEEECTTCTTEEEECCSSSEE
T ss_pred EEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecCCCCce---------------EEEEECCCCCCEEEEEecCCcE
Confidence 999999 8999999876 9999999987 88888898888765 799999998 899999999999
Q ss_pred EEEecCCCCCceeE----------------------------------EecCCCCccceeeecCCcccccccceeeeecc
Q 014644 329 RIFSHGVGSAGGIT----------------------------------VEAGKNENRKPILQAAPRARRSSLSNLTRGLY 374 (421)
Q Consensus 329 ~iwd~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 374 (421)
++||+.+....... ...|..++..++|+|+ |+ +|++|+.
T Consensus 331 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~-----~la~~~~ 403 (416)
T 2pm9_A 331 EVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG--GK-----LVQITPD 403 (416)
T ss_dssp EEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETT--TE-----EECBCTT
T ss_pred EEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeC--Ce-----EEEEeCC
Confidence 99999876432111 0116677889999998 44 9999999
Q ss_pred cCc-ccCCC
Q 014644 375 RQA-HENSS 382 (421)
Q Consensus 375 d~~-~iw~~ 382 (421)
|+. ++|+.
T Consensus 404 d~~v~~w~~ 412 (416)
T 2pm9_A 404 GKGVSITNP 412 (416)
T ss_dssp SSCBCCBCC
T ss_pred CCeEEEEEe
Confidence 999 99943
No 55
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.9e-34 Score=254.94 Aligned_cols=242 Identities=11% Similarity=0.130 Sum_probs=201.4
Q ss_pred eeeeeecCCCCcceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCce----eeeeeecCCCCCCccCCCeeEEEEecCCCC
Q 014644 128 RCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQ----CFNIVDMKPSNMDDLTEVITSAEFHPIYCN 201 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 201 (421)
.+...+ .+|.+.|++++|+|++ ++|++| .|++|++|++..... .+. .+.+|...|.+++|+|++ .
T Consensus 8 ~l~~~l-~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~s~dg-~ 78 (319)
T 3frx_A 8 VLRGTL-EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVR-------SFKGHSHIVQDCTLTADG-A 78 (319)
T ss_dssp EEEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEE-------EEECCSSCEEEEEECTTS-S
T ss_pred EEEEEE-ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccce-------EEeCCcccEEEEEECCCC-C
Confidence 555667 8999999999999965 899998 999999999863221 222 347899999999999999 9
Q ss_pred eEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCc
Q 014644 202 LLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDST 280 (421)
Q Consensus 202 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~ 280 (421)
+|++++.|++|++||+.+++.. ..+.. |...|.+++|+|++.+|++++. +.|++||++ +.
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~----~~~~~-------------h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~ 139 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETY----QRFVG-------------HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQ 139 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEE----EEEEC-------------CSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SC
T ss_pred EEEEEeCCCEEEEEECCCCCee----EEEcc-------------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CC
Confidence 9999999999999999987643 33444 4889999999999999999876 999999996 56
Q ss_pred ceeEEeeccCcccccccccCCCcceeeeEEEEcCC------CCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCcccee
Q 014644 281 PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD------GLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPI 354 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~------~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 354 (421)
.+..+.+|...+ .+++|+|. +..|++++.|+.|++||+++. .....+.+|..++..++
T Consensus 140 ~~~~~~~h~~~v---------------~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~h~~~v~~~~ 203 (319)
T 3frx_A 140 CLATLLGHNDWV---------------SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF-QIEADFIGHNSNINTLT 203 (319)
T ss_dssp EEEEECCCSSCE---------------EEEEECCC------CCEEEEEETTSCEEEEETTTT-EEEEEECCCCSCEEEEE
T ss_pred eEEEEeccCCcE---------------EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-hhheeecCCCCcEEEEE
Confidence 777788887755 78899884 458999999999999999876 66778899999999999
Q ss_pred eecCCcccccccceeeeecccCc-ccCCCC-CccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 355 LQAAPRARRSSLSNLTRGLYRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 355 ~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
|+|+ + .+|++|+.|+. ++|+.. ............|.+++|+|++.+|++++++++.+|+
T Consensus 204 ~sp~--g-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~ 264 (319)
T 3frx_A 204 ASPD--G-----TLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFS 264 (319)
T ss_dssp ECTT--S-----SEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred EcCC--C-----CEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 9998 3 48999999999 999432 2222333445789999999999999999999999986
No 56
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-35 Score=261.68 Aligned_cols=252 Identities=15% Similarity=0.208 Sum_probs=184.4
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|++++| +|++++|++|+.|++|+|||+........
T Consensus 56 ~h~~~v~~v~~--sp~~~~las~s~D~~v~iw~~~~~~~~~~-------------------------------------- 95 (330)
T 2hes_X 56 AHKKAIRSVAW--RPHTSLLAAGSFDSTVSIWAKEESADRTF-------------------------------------- 95 (330)
T ss_dssp CCCSCEEEEEE--CTTSSEEEEEETTSCEEEEEC-------C--------------------------------------
T ss_pred CccCCEEEEEE--CCCCCEEEEEeCCCcEEEEEcccCcCccc--------------------------------------
Confidence 39999999999 78999999999999999999865320000
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCc---eeeeeeecCCCCCCcc
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD---QCFNIVDMKPSNMDDL 186 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~---~~~~~~~~~~~~~~~~ 186 (421)
..+++..+ .+|...|.+++|+|++++|+++ .|++|++||++..+ +++.. +.+|
T Consensus 96 ---------------~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~-------~~~h 152 (330)
T 2hes_X 96 ---------------EMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISV-------LQEH 152 (330)
T ss_dssp ---------------CCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEE-------ECCC
T ss_pred ---------------cceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEE-------eccC
Confidence 00445556 8999999999999999999999 99999999995333 23333 3789
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC--CCEEEE
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND--GQHLLS 264 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~ 264 (421)
...|.+++|+|++ .+|++++.|++|++||+..+.. +....+ .+|...|.+++|+|+ +.+|++
T Consensus 153 ~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~--~~~~~~-------------~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 153 SQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDW--ECVAVL-------------NGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp SSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE--EEEEEE-------------CCCSSCEEEEEECCSSSSCEEEE
T ss_pred CCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCe--eEEEEc-------------cCCCCcEEEEEecCCCCeeEEEE
Confidence 9999999999999 9999999999999999876421 111333 345889999999998 678888
Q ss_pred ecC-CeEEEEECCCCC-------cceeEEee-ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC
Q 014644 265 RDY-MNLKLWDIRMDS-------TPVATFKI-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 265 ~~~-~~i~i~d~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~ 335 (421)
++. ++|++||++... .....+.. |...+ .+++|++++ +|++++.||.|++||..+
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v---------------~~v~~s~~~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQV---------------YNVAWGFNG-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCE---------------EEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred EeCCCeEEEEEecCCCccccceeEEeeecccccccce---------------EEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence 865 999999986411 12222222 44332 799999765 789999999999999886
Q ss_pred CCC--ceeEEecCCC-CccceeeecCCcccccccceeeeecccCc-ccCCC
Q 014644 336 GSA--GGITVEAGKN-ENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 336 ~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
+.. ....+.+|.. .+..++|+|...+. .|++|+.|+. ++|+.
T Consensus 281 ~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~-----~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 281 GEWKVFAKRALCHGVYEINVVKWLELNGKT-----ILATGGDDGIVNFWSL 326 (330)
T ss_dssp TEEEEEEEESCTTTTSCEEEEEEC-----C-----CEEEEETTSEEEEEEC
T ss_pred CceEEEeccccccccceEEEEEEecCCCce-----EEEEecCCCcEEEEEe
Confidence 531 1233467877 89999999842233 8999999999 99943
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8.5e-34 Score=256.60 Aligned_cols=296 Identities=16% Similarity=0.132 Sum_probs=203.5
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|.+.|++++| +|++++|++|+.||+|++||+.++...
T Consensus 8 ~gH~~~v~~~~~--~~~~~~l~~~~~dg~i~iw~~~~~~~~--------------------------------------- 46 (351)
T 3f3f_A 8 SGHDDLVHDVVY--DFYGRHVATCSSDQHIKVFKLDKDTSN--------------------------------------- 46 (351)
T ss_dssp CCCSSCEEEEEE--CSSSSEEEEEETTSEEEEEEECSSSCC---------------------------------------
T ss_pred cccccceeEEEE--cCCCCEEEEeeCCCeEEEEECCCCCCc---------------------------------------
Confidence 479999999999 789999999999999999999864310
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecC--CCCEEEEE-cCCcEEEEeCCCCc--------eeeeeeec
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISD--------QCFNIVDM 178 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~-~d~~i~lwd~~~~~--------~~~~~~~~ 178 (421)
.++...+ .+|...|.+++|+| ++++|+++ .|++|++||++... +....
T Consensus 47 -----------------~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~--- 105 (351)
T 3f3f_A 47 -----------------WELSDSW-RAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCT--- 105 (351)
T ss_dssp -----------------EEEEEEE-ECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEE---
T ss_pred -----------------ceeccee-ccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeee---
Confidence 0333445 78999999999999 69999999 99999999998432 22333
Q ss_pred CCCCCCccCCCeeEEEEecC--CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEc
Q 014644 179 KPSNMDDLTEVITSAEFHPI--YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 256 (421)
Q Consensus 179 ~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s 256 (421)
+..|...|.+++|+|+ + .+|++++.|+.|++||+++++.. ..+...............|...+.+++|+
T Consensus 106 ----~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 106 ----LNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDL----RSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp ----ECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCT----TCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred ----ecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHh----ccccccccccccccccCCcccceeEEEec
Confidence 3679999999999999 8 99999999999999999987643 22221011111111223567889999999
Q ss_pred CC---CCEEEEecC-CeEEEEECCCCCcc--eeEEeeccCcccccccccCCCcceeeeEEEEcCCC----CEEEEeeCCC
Q 014644 257 ND---GQHLLSRDY-MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG----LHFATGSYSN 326 (421)
Q Consensus 257 ~~---~~~l~~~~~-~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~l~~~s~dg 326 (421)
|+ +.++++++. +.+.+|+... +.. +..+.+|...+ .+++|+|++ ++|++|+.||
T Consensus 177 p~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i---------------~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 177 PSRFSPEKLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLI---------------RSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCSSSCCEEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCE---------------EEEEECCCSSCSSEEEEEEETTS
T ss_pred cCCCCCcEEEEecCCCcEEEEccCC-CceeeeeecCCCCcce---------------eEEEECCCCCCcceEEEEEcCCC
Confidence 97 889998876 8887777654 443 55566666654 799999998 8999999999
Q ss_pred eEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-----ccCC--CCCccccccccccCeEEE
Q 014644 327 LLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-----HENS--SSGHHELSYNLSSKLLHL 399 (421)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-----~iw~--~~~~~~~~~~~~~~v~~~ 399 (421)
.|++||+..+.. ......+..........+. ...++.+..++. .+|. ....+....+|...|+++
T Consensus 241 ~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 241 RIRIFKITEKLS-PLASEESLTNSNMFDNSAD-------VDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV 312 (351)
T ss_dssp CEEEEEEEECC-----------------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred eEEEEeCCCCcC-ccccCCcccceeccCCCcc-------cccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence 999999987622 2222222222222222222 112333332222 3442 123444566789999999
Q ss_pred EEccCCCeEEEec-CCceEEEe
Q 014644 400 AWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 400 ~~spd~~~la~~~-~~~~~i~~ 420 (421)
+|+|++++||+++ ++.+++|+
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEE
T ss_pred EEcCCCCEEEEecCCCcEEEEe
Confidence 9999999999999 55699997
No 58
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=257.65 Aligned_cols=267 Identities=15% Similarity=0.132 Sum_probs=196.8
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecC-CCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMD-HFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...|++++| +|++++|++|+.|++|+|||+..+......... |.. .+.++.+++++.+++.+
T Consensus 58 ~~h~~~v~~~~~--sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~------------~v~~v~~sp~~~~l~s~ 123 (345)
T 3fm0_A 58 EGHQRTVRKVAW--SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN------------EVKSVAWAPSGNLLATC 123 (345)
T ss_dssp SSCSSCEEEEEE--CTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS------------CEEEEEECTTSSEEEEE
T ss_pred cccCCcEEEEEE--CCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC------------CceEEEEeCCCCEEEEE
Confidence 479999999999 799999999999999999999887644443333 334 45566666677777777
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
+. ++.+++|++.......++..+ .+|...|.+++|+|++++|+++ .|++|++||.+ .+...... ++.+|.
T Consensus 124 s~--D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~-~~~~~~~~-----~~~~h~ 194 (345)
T 3fm0_A 124 SR--DKSVWVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREE-EDDWVCCA-----TLEGHE 194 (345)
T ss_dssp ET--TSCEEEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE-TTEEEEEE-----EECCCS
T ss_pred EC--CCeEEEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec-CCCEEEEE-----EecCCC
Confidence 66 678999999877656777788 8999999999999999999999 99999999998 33322111 237899
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccc-ccccceeEEEEcCCCCEEEEec
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFT-EIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
..|.+++|+|++ ++|++++.|++|++||.......... ..... .........+. .|...|.+++|+|++..|++++
T Consensus 195 ~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 195 STVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNEQGV-ACSGS-DPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC 271 (345)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCTTCC-CCC----CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCCccc-eeecc-CCccceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence 999999999999 99999999999999997543211000 00000 00000000111 2678899999999999999886
Q ss_pred C-CeEEEEECCCCC---cceeE-----EeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEEeeCCCeEEEEecCCC
Q 014644 267 Y-MNLKLWDIRMDS---TPVAT-----FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 267 ~-~~i~i~d~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~~s~dg~i~iwd~~~~ 336 (421)
. +.|++|+..... .+... ..+|...+ .+++|+|++ .+|++|+.||.|++|++.+.
T Consensus 272 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V---------------~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 272 GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV---------------NCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE---------------EEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE---------------eEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 5 999999986421 11111 12444433 899999987 59999999999999999876
Q ss_pred C
Q 014644 337 S 337 (421)
Q Consensus 337 ~ 337 (421)
+
T Consensus 337 ~ 337 (345)
T 3fm0_A 337 E 337 (345)
T ss_dssp -
T ss_pred C
Confidence 3
No 59
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-34 Score=264.70 Aligned_cols=259 Identities=14% Similarity=0.152 Sum_probs=204.6
Q ss_pred eEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE
Q 014644 117 KIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF 195 (421)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 195 (421)
..|+.... .+.+.+ .+|.+.|++++|+|++++|++| .|++|++||+. .++....+ ..|...|.+++|
T Consensus 49 ~~~~~~~~---~~~~~l-~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~-~~~~~~~~-------~~h~~~v~~~~~ 116 (380)
T 3iz6_a 49 VSFNPTDL---VCCRTL-QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL-TSQKTHAI-------KLHCPWVMECAF 116 (380)
T ss_dssp CCCCCCCC---EEEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT-TTEEEEEE-------ECCCTTCCCCEE
T ss_pred ccccccee---EEeecc-cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCccceEE-------ecCCCCEEEEEE
Confidence 34444443 777888 9999999999999999999999 99999999998 45555544 678999999999
Q ss_pred ecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC-CEEEEecC-CeEEEE
Q 014644 196 HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG-QHLLSRDY-MNLKLW 273 (421)
Q Consensus 196 ~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~-~~i~i~ 273 (421)
+|++ ++|++++.|+.+++||+........ .......+.+|...+.++.|+|++ ..|++++. ++|++|
T Consensus 117 s~~g-~~las~~~d~~v~iw~~~~~~~~~~----------~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~w 185 (380)
T 3iz6_a 117 APNG-QSVACGGLDSACSIFNLSSQADRDG----------NMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLW 185 (380)
T ss_dssp CTTS-SEEEECCSSSCCEEEECCCCSSCCC----------SSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEE
T ss_pred CCCC-CEEEEeeCCCcEEEEECCCCccccC----------CccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEE
Confidence 9999 9999999999999999976432111 011122356678999999999974 56888865 999999
Q ss_pred ECCCCCcceeEE-----eeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 274 DIRMDSTPVATF-----KIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 274 d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
|+++ ++.+..+ .+|... +.+++|+| ++.+|++|+.||.|++||++........+.+|.
T Consensus 186 d~~~-~~~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~ 249 (380)
T 3iz6_a 186 DVTT-GQRISIFGSEFPSGHTAD---------------VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE 249 (380)
T ss_dssp CTTT-CCEEEEECCCSSSSCCSC---------------EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS
T ss_pred EcCC-CcEEEEeecccCCCCccC---------------eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC
Confidence 9987 7776666 334433 37899977 889999999999999999986657788999999
Q ss_pred CCccceeeecCCcccccccceeeeecccCc-ccCCC--CCcccccc-------ccccCeEEEEEccCCCeEEEec-CCce
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SGHHELSY-------NLSSKLLHLAWHPTTNLIACAN-GNSL 416 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~-------~~~~~v~~~~~spd~~~la~~~-~~~~ 416 (421)
..|.+++|+|+ +..|++|+.|+. ++|+. +..+.... .+...|++++|+|+|++|++|+ ++.+
T Consensus 250 ~~v~~v~~~p~-------~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i 322 (380)
T 3iz6_a 250 GDINSVKFFPD-------GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDC 322 (380)
T ss_dssp SCCCEEEECTT-------SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCE
T ss_pred CCeEEEEEecC-------CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCE
Confidence 99999999998 348999999999 99933 22222211 1223589999999999999998 5669
Q ss_pred EEEeC
Q 014644 417 FFHYA 421 (421)
Q Consensus 417 ~i~~~ 421 (421)
++|+.
T Consensus 323 ~vwd~ 327 (380)
T 3iz6_a 323 YVWDT 327 (380)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99973
No 60
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-34 Score=265.71 Aligned_cols=298 Identities=9% Similarity=0.036 Sum_probs=208.7
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+....|.+|+| +|||+++|+++.|++|+ |...++ .+ ..|...|++++|+ |++
T Consensus 13 ~~~~~v~sv~~--SpDG~~iASas~D~TV~--d~~~~~--~l--~gh~~~v~~V~Fs------------Pdg-------- 64 (588)
T 2j04_A 13 EFEDWKNNLTW--ARDGTLYLTTFPDISIG--QPKYAK--DI--NCNSKNLFHVKEF------------PLE-------- 64 (588)
T ss_dssp CCSSSSCCEEE--CTTSCEEEECSSSEEEE--EECCCS--CC--SSBGGGTEEEEEE------------CCC--------
T ss_pred HhhccEEEEEE--CCCCCEEEEEcCCceee--cccccc--ee--cCCCccEEEEEEC------------CCC--------
Confidence 34688999999 89999999999999999 644433 22 2355555544443 332
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC-
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE- 188 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~- 188 (421)
......+|+. +....+...|...|.+++|+|+|++||++ .||.|++||.+ . ++..+ . |..
T Consensus 65 -~~~~~~~~~~------~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~--~-~l~~l-------~-~~~~ 126 (588)
T 2j04_A 65 -FENKLDFELA------QQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN--K-MLTNL-------D-SKGN 126 (588)
T ss_dssp -CCCTTTTSCC------CSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETT--E-EEEEC-------C-CSSC
T ss_pred -CcceEEEEeC------CCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC--c-eeeec-------c-CCCc
Confidence 1223333432 22233322668899999999999999999 99999999965 2 44332 4 443
Q ss_pred ----CeeEEEEecCCCCeEEEEEcCCeEEEEECCccccccc---chhhhccccccCCCcccccccccceeEEEEcCCCCE
Q 014644 189 ----VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDH---SARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 261 (421)
Q Consensus 189 ----~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~---~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (421)
.+.+++|+|+| ++|++|+.||+|++||+..+..... ....+..| ..+|...|.+++|+||| +
T Consensus 127 ~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~---------~~gh~~~V~sVawSPdg-L 195 (588)
T 2j04_A 127 LSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLS---------DAGSKDWVTHIVWYEDV-L 195 (588)
T ss_dssp STTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECS---------CTTCCCCEEEEEEETTE-E
T ss_pred cccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeeeecc---------cccccccEEEEEEcCCc-E
Confidence 59999999999 9999999999999999988642110 11233221 23457899999999999 5
Q ss_pred EEEecCCeEEEEECCCCCcc---eeEEe-eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC
Q 014644 262 LLSRDYMNLKLWDIRMDSTP---VATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 262 l~~~~~~~i~i~d~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
++++.|+.|++||+.. +.. ..++. +|...+ .+++|+ |++||+++ ++.|++||+.++
T Consensus 196 aass~D~tVrlWd~~~-~~~~~~~~tL~~~h~~~V---------------~svaFs--g~~LASa~-~~tIkLWd~~~~- 255 (588)
T 2j04_A 196 VAALSNNSVFSMTVSA-SSHQPVSRMIQNASRRKI---------------TDLKIV--DYKVVLTC-PGYVHKIDLKNY- 255 (588)
T ss_dssp EEEETTCCEEEECCCS-SSSCCCEEEEECCCSSCC---------------CCEEEE--TTEEEEEC-SSEEEEEETTTT-
T ss_pred EEEeCCCeEEEEECCC-CccccceeeecccccCcE---------------EEEEEE--CCEEEEEe-CCeEEEEECCCC-
Confidence 5555669999999975 442 34553 565544 789999 68899887 699999999976
Q ss_pred CceeEEecCCCCccceee--ecCCcccccccceeeeecccCc------------------------ccCCCCCccccccc
Q 014644 338 AGGITVEAGKNENRKPIL--QAAPRARRSSLSNLTRGLYRQA------------------------HENSSSGHHELSYN 391 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~d~~------------------------~iw~~~~~~~~~~~ 391 (421)
.......+|.+.+..+.+ +++ ...|++++.+|. ++|...+.......
T Consensus 256 ~~~~~~~gh~~~V~~va~~~s~d-------~~~La~a~edG~klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~ 328 (588)
T 2j04_A 256 SISSLKTGSLENFHIIPLNHEKE-------STILLMSNKTSYKVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE 328 (588)
T ss_dssp EEEEEECSCCSCCCEEEETTCSS-------CEEEEECSSCEEEEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC
T ss_pred eEEEEEcCCCceEEEEEeeeCCC-------CCEEEEEcCCCCEEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec
Confidence 332333389999999999 777 236666665554 44522211122223
Q ss_pred cccCeEEEEEccCCCeEEEec
Q 014644 392 LSSKLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 392 ~~~~v~~~~~spd~~~la~~~ 412 (421)
....|.+++|||||+.+|+++
T Consensus 329 ~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 329 TTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CEEEEEEEEECTTSSEEEEEE
T ss_pred cceEEEEEEECCCCCEEEEEE
Confidence 355699999999999999987
No 61
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-33 Score=260.13 Aligned_cols=248 Identities=18% Similarity=0.296 Sum_probs=195.7
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccc
Q 014644 34 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 113 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 113 (421)
..|++++| +|++++|++|+.|++|+|||+.+++
T Consensus 124 ~~v~~v~~--s~dg~~l~s~~~d~~i~iwd~~~~~--------------------------------------------- 156 (393)
T 1erj_A 124 LYIRSVCF--SPDGKFLATGAEDRLIRIWDIENRK--------------------------------------------- 156 (393)
T ss_dssp CBEEEEEE--CTTSSEEEEEETTSCEEEEETTTTE---------------------------------------------
T ss_pred eeEEEEEE--CCCCCEEEEEcCCCeEEEEECCCCc---------------------------------------------
Confidence 35999999 7999999999999999999998754
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeE
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 192 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (421)
++..+ .+|...|.+++|+|++++|+++ .|++|++||++ .+++...+ .+...+.+
T Consensus 157 ---------------~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~-~~~~~~~~--------~~~~~v~~ 211 (393)
T 1erj_A 157 ---------------IVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR-TGQCSLTL--------SIEDGVTT 211 (393)
T ss_dssp ---------------EEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEEE--------ECSSCEEE
T ss_pred ---------------EEEEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC-CCeeEEEE--------EcCCCcEE
Confidence 22334 7899999999999999999999 99999999998 45554443 25567999
Q ss_pred EEEec-CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeE
Q 014644 193 AEFHP-IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNL 270 (421)
Q Consensus 193 ~~~~p-~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i 270 (421)
++|+| ++ .+|++++.|+.|++||++++.... .+.. ......+|...|.+++|+|+|++|++++. +.|
T Consensus 212 ~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~----~~~~------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 212 VAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVE----RLDS------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEECSTTC-CEEEEEETTSCEEEEETTTCCEEE----EEC------------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCCC-CEEEEEcCCCcEEEEECCCCcEEE----eecc------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 99999 67 999999999999999998875431 1111 00112456889999999999999999876 999
Q ss_pred EEEECCCC-----------CcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCc
Q 014644 271 KLWDIRMD-----------STPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAG 339 (421)
Q Consensus 271 ~i~d~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 339 (421)
++||++.. +.+...+.+|...+ .+++|+|++++|++|+.||.|++||+.++ ..
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------------~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-~~ 344 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV---------------LSVATTQNDEYILSGSKDRGVLFWDKKSG-NP 344 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCE---------------EEEEECGGGCEEEEEETTSEEEEEETTTC-CE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcE---------------EEEEECCCCCEEEEEeCCCeEEEEECCCC-eE
Confidence 99999752 12334555666543 79999999999999999999999999987 66
Q ss_pred eeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 340 GITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
...+.+|...+..+++++...- ......|++|+.|+. ++|+
T Consensus 345 ~~~l~~h~~~v~~v~~~~~~~~-~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 345 LLMLQGHRNSVISVAVANGSSL-GPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp EEEEECCSSCEEEEEECSSCTT-CTTCEEEEEEETTSEEEEEE
T ss_pred EEEECCCCCCEEEEEecCCcCc-CCCCCEEEEECCCCcEEECc
Confidence 7889999999999999863100 001348999999999 9993
No 62
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-33 Score=257.34 Aligned_cols=311 Identities=9% Similarity=-0.013 Sum_probs=206.7
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCC-------cEEEeecCCce------eEEe---eecCCCCCcccccccccccceeec
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDK-------TIKLWKVRDQK------VKKI---KEMDHFPFVSSENTLLAEKNFMNE 96 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~-------~v~lwd~~~~~------~~~~---~~~~~~~~v~~~~~~~~~~~~~~~ 96 (421)
.-+|.+++| +|++.+|++|+.|. .|++|++.... +... ....+...|.++++. +..+..
T Consensus 14 g~PV~sv~f--s~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~ 88 (365)
T 4h5i_A 14 GYPAYGAKF--LNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILV 88 (365)
T ss_dssp SSCEEEEEE--EETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEE
T ss_pred CCCEEEEEE--eCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEE
Confidence 458999999 58899999997643 59999987653 1111 112233334444332 233333
Q ss_pred cCCCCceeeeecccccccceeEEeecccce-eeeeeee----cCCCCcceEEEeecCCCCEEEE--E-cCCcEEEEeCCC
Q 014644 97 HNPPSFAHGYHLEWTENMATKIANVGNSVH-ARCQKVY----PHAHDFNINSISNNSDCETFVS--A-DDLRINLWNLEI 168 (421)
Q Consensus 97 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~h~~~v~~l~~~~~~~~l~s--~-~d~~i~lwd~~~ 168 (421)
..+.....+..++. +..+++|+...... .+..... ...+...+++++|+|||++|++ + .|++|+|||++
T Consensus 89 g~~~~~~~l~s~~~--d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~- 165 (365)
T 4h5i_A 89 GCNENSTKITQGKG--NKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS- 165 (365)
T ss_dssp ECCCCHHHHHHTSC--CCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT-
T ss_pred EECCCccEEEEecC--CCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC-
Confidence 33344444444433 45789998765421 1222211 1234556899999999999864 4 68999999998
Q ss_pred CceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccccc
Q 014644 169 SDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 248 (421)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 248 (421)
..++...+ .|...|.+++|+|++ ++|++++.++ +++|+..++..... ... ..|..
T Consensus 166 ~~~~~~~~--------~~~~~V~~v~fspdg-~~l~s~s~~~-~~~~~~~~~~~~~~--~~~-------------~~~~~ 220 (365)
T 4h5i_A 166 DLTEKFEI--------ETRGEVKDLHFSTDG-KVVAYITGSS-LEVISTVTGSCIAR--KTD-------------FDKNW 220 (365)
T ss_dssp TTEEEEEE--------ECSSCCCEEEECTTS-SEEEEECSSC-EEEEETTTCCEEEE--ECC-------------CCTTE
T ss_pred CCcEEEEe--------CCCCceEEEEEccCC-ceEEecccee-EEEEEeccCcceee--eec-------------CCCCC
Confidence 45555443 367789999999999 9999988555 66666665543211 111 23467
Q ss_pred ceeEEEEcCCCCEEEEecC-C----eEEEEECCCCCcc----eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEE
Q 014644 249 SISDIKFANDGQHLLSRDY-M----NLKLWDIRMDSTP----VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF 319 (421)
Q Consensus 249 ~v~~~~~s~~~~~l~~~~~-~----~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 319 (421)
.+.+++|+|+++++++++. + .+++|++.. ... ...+.+|...+ ++++|+|+|++|
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~V---------------~~~~~Spdg~~l 284 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKS-GNTSVLRSKQVTNRFKGI---------------TSMDVDMKGELA 284 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET-TEEEEEEEEEEESSCSCE---------------EEEEECTTSCEE
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeeccccc-ceecceeeeeecCCCCCe---------------EeEEECCCCCce
Confidence 8999999999999998753 3 688888864 322 23345555543 799999999999
Q ss_pred EEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCCccccccccccCeEE
Q 014644 320 ATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGHHELSYNLSSKLLH 398 (421)
Q Consensus 320 ~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~~~~~~~~~~~v~~ 398 (421)
|+|+.|++|+|||+++++.....+.+|..+|.+++|+|+ ++ +|++|+.|++ +||+..............+..
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpd--g~-----~laS~S~D~tvrvw~ip~~~~~~~s~~~~l~k 357 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPD--ST-----YVASVSAANTIHIIKLPLNYANYTSMKQKISK 357 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTT--SC-----EEEEEETTSEEEEEECCTTTTC----------
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCC--CC-----EEEEEeCCCeEEEEEcCCCCcCccCcccccee
Confidence 999999999999999884444456899999999999999 44 9999999999 999554333333333333433
Q ss_pred E
Q 014644 399 L 399 (421)
Q Consensus 399 ~ 399 (421)
+
T Consensus 358 l 358 (365)
T 4h5i_A 358 L 358 (365)
T ss_dssp -
T ss_pred e
Confidence 3
No 63
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4e-33 Score=252.25 Aligned_cols=242 Identities=14% Similarity=0.164 Sum_probs=195.3
Q ss_pred eeeeeecCCCCcceEEEee-----cC-CCCEEEEE-cCCcEEEEeCCCCc------eeeeeeecCCCCCCccCCCeeEEE
Q 014644 128 RCQKVYPHAHDFNINSISN-----NS-DCETFVSA-DDLRINLWNLEISD------QCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~-----~~-~~~~l~s~-~d~~i~lwd~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
++...+ .+|.+.|++++| ++ ++++|++| .|++|++||+.... .... .+.+|...|.+++
T Consensus 12 ~~~~~l-~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~-------~l~~h~~~V~~~~ 83 (343)
T 2xzm_R 12 VKRGIL-EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHK-------ALTGHNHFVSDLA 83 (343)
T ss_dssp EEEEEE-ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEE-------EECCCSSCEEEEE
T ss_pred eeeeee-ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccc-------hhccCCCceEEEE
Confidence 556667 899999999999 76 89999999 99999999987322 1222 3478999999999
Q ss_pred EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEE
Q 014644 195 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLW 273 (421)
Q Consensus 195 ~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~ 273 (421)
|+|++ .++++++.|++|++||+++++.. ..+.. |...|.+++|+|++++|++++. +.|++|
T Consensus 84 ~~~~~-~~l~s~s~D~~v~lwd~~~~~~~----~~~~~-------------h~~~v~~v~~sp~~~~l~s~~~d~~i~~w 145 (343)
T 2xzm_R 84 LSQEN-CFAISSSWDKTLRLWDLRTGTTY----KRFVG-------------HQSEVYSVAFSPDNRQILSAGAEREIKLW 145 (343)
T ss_dssp ECSST-TEEEEEETTSEEEEEETTSSCEE----EEEEC-------------CCSCEEEEEECSSTTEEEEEETTSCEEEE
T ss_pred ECCCC-CEEEEEcCCCcEEEEECCCCcEE----EEEcC-------------CCCcEEEEEECCCCCEEEEEcCCCEEEEE
Confidence 99999 99999999999999999987543 33344 4889999999999999999875 999999
Q ss_pred ECCCCCcceeEEe---eccCcccccccccCCCcceeeeEEEEcCCC----------CEEEEeeCCCeEEEEecCCCCCce
Q 014644 274 DIRMDSTPVATFK---IHEHLRPKLCDLYNNDSIFDKFECSVSGDG----------LHFATGSYSNLLRIFSHGVGSAGG 340 (421)
Q Consensus 274 d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----------~~l~~~s~dg~i~iwd~~~~~~~~ 340 (421)
|+.. ....... .|...+ .+++|+|++ .++++++.||.|++||.. ....
T Consensus 146 d~~~--~~~~~~~~~~~~~~~v---------------~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~ 206 (343)
T 2xzm_R 146 NILG--ECKFSSAEKENHSDWV---------------SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIR 206 (343)
T ss_dssp ESSS--CEEEECCTTTSCSSCE---------------EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEE
T ss_pred eccC--CceeeeecccCCCcee---------------eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--Ccee
Confidence 9963 2222222 333322 789999986 799999999999999943 3567
Q ss_pred eEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC--CCccccccccccCeEEEEEccCCCeEEEecCCceE
Q 014644 341 ITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLF 417 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~ 417 (421)
..+.+|...+..++|+|+ +. +|++|+.|+. ++|+. .........+...|.+++|+|++++|+++.+++++
T Consensus 207 ~~~~~h~~~v~~~~~s~~--g~-----~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~ 279 (343)
T 2xzm_R 207 YTFKAHESNVNHLSISPN--GK-----YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVK 279 (343)
T ss_dssp EEEECCSSCEEEEEECTT--SS-----EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEE
T ss_pred EEEcCccccceEEEECCC--CC-----EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEE
Confidence 788999999999999998 33 8999999999 99954 22233333456679999999999999999999999
Q ss_pred EEeC
Q 014644 418 FHYA 421 (421)
Q Consensus 418 i~~~ 421 (421)
+|+.
T Consensus 280 iw~~ 283 (343)
T 2xzm_R 280 IFNL 283 (343)
T ss_dssp EEES
T ss_pred EEEe
Confidence 9973
No 64
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.3e-35 Score=260.50 Aligned_cols=249 Identities=13% Similarity=0.094 Sum_probs=187.2
Q ss_pred eeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCce-eeeeeecCCCCCCccCCCeeEEEEec--CCCCeEEEE
Q 014644 131 KVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ-CFNIVDMKPSNMDDLTEVITSAEFHP--IYCNLLAYS 206 (421)
Q Consensus 131 ~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~ 206 (421)
+.+..+|.+.|++++|+|+|++|++| .|++|+|||+..... .... +.+|...|.+++|+| ++ .+|+++
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~-------l~gH~~~V~~v~~~~~~~~-~~l~s~ 77 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIAD-------LRGHEGPVWQVAWAHPMYG-NILASC 77 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEE-------EECCSSCEEEEEECCGGGS-SCEEEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEE-------EcCCCccEEEEEeCCCCCC-CEEEEE
Confidence 33347999999999999999999999 999999999984322 2333 378999999999986 36 899999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC--CCEEEEecC-CeEEEEECCCCCcc--
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND--GQHLLSRDY-MNLKLWDIRMDSTP-- 281 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~-~~i~i~d~~~~~~~-- 281 (421)
+.|++|++||++++... ....+ .+|...|.+++|+|+ +.+|++++. +.|++||++.....
T Consensus 78 s~D~~v~iWd~~~~~~~--~~~~~-------------~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWE--KSHEH-------------AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ETTSCEEEECCSSSCCC--EEEEE-------------CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred ECCCEEEEEECCCCcce--EEEEc-------------cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 99999999999875321 01222 345789999999998 789999876 99999999752221
Q ss_pred eeEEeeccCcccccccccCCCcceeeeEEEEcCC-----------------CCEEEEeeCCCeEEEEecCCCC--CceeE
Q 014644 282 VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD-----------------GLHFATGSYSNLLRIFSHGVGS--AGGIT 342 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-----------------~~~l~~~s~dg~i~iwd~~~~~--~~~~~ 342 (421)
...+.+|...+ .+++|+|+ +++|++|+.|+.|++||++... .....
T Consensus 143 ~~~~~~h~~~v---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 143 KKINNAHTIGC---------------NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp CCBTTSSSSCB---------------CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred eeeeccccCCc---------------ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 23334455433 67889887 4789999999999999997543 24567
Q ss_pred EecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCC------ccccccccccCeEEEEEccCCCeEEEec-CC
Q 014644 343 VEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG------HHELSYNLSSKLLHLAWHPTTNLIACAN-GN 414 (421)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~------~~~~~~~~~~~v~~~~~spd~~~la~~~-~~ 414 (421)
+.+|...|..++|+|+.... ...|++++.|+. ++|+... .......|...|.+++|+|++++||+++ ++
T Consensus 208 l~~h~~~V~~v~~sp~~~~~---~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLP---TSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCS---CCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred cccCCCceEEEEecCCCCCC---CceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 88999999999999973100 138999999999 9994322 1122346788999999999999999988 56
Q ss_pred ceEEEe
Q 014644 415 SLFFHY 420 (421)
Q Consensus 415 ~~~i~~ 420 (421)
.++||+
T Consensus 285 ~v~lw~ 290 (316)
T 3bg1_A 285 KVTLWK 290 (316)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 699996
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-33 Score=256.92 Aligned_cols=275 Identities=16% Similarity=0.215 Sum_probs=215.8
Q ss_pred ccccc--EEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 31 EIEEK--INRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 31 ~h~~~--V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
+|... ++++.| + +..+++++.|+.|++||+.+++....
T Consensus 89 ~~~~~~~~~~~~~--s--~~~l~~~~~d~~v~lw~~~~~~~~~~------------------------------------ 128 (401)
T 4aez_A 89 GIIDDYYLNLLDW--S--NLNVVAVALERNVYVWNADSGSVSAL------------------------------------ 128 (401)
T ss_dssp TCCCCTTCBCEEE--C--TTSEEEEEETTEEEEEETTTCCEEEE------------------------------------
T ss_pred CCcCCceEEEEee--c--CCCEEEEECCCeEEEeeCCCCcEeEe------------------------------------
Confidence 55544 455666 3 35688899999999999988652221
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
+...|...|.+++|+|++++|++| .||.|++||+. .++....+ .+|.
T Consensus 129 ------------------------~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~-------~~~~ 176 (401)
T 4aez_A 129 ------------------------AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE-SQTKLRTM-------AGHQ 176 (401)
T ss_dssp ------------------------EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TCCEEEEE-------CCCS
T ss_pred ------------------------eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-CCeEEEEe-------cCCC
Confidence 113478899999999999999999 99999999998 45555544 6899
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 267 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (421)
..|.+++|+ + ..|++++.||.|++||++..... ...+ ..|...|.+++|+|++++|++++.
T Consensus 177 ~~v~~~~~~--~-~~l~~~~~dg~i~i~d~~~~~~~---~~~~-------------~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 177 ARVGCLSWN--R-HVLSSGSRSGAIHHHDVRIANHQ---IGTL-------------QGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp SCEEEEEEE--T-TEEEEEETTSEEEEEETTSSSCE---EEEE-------------ECCSSCEEEEEECTTSSEEEEEET
T ss_pred CceEEEEEC--C-CEEEEEcCCCCEEEEecccCcce---eeEE-------------cCCCCCeeEEEEcCCCCEEEEEeC
Confidence 999999995 4 78999999999999999854321 1233 335889999999999999999876
Q ss_pred -CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEEee--CCCeEEEEecCCCCCceeEE
Q 014644 268 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFATGS--YSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 268 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~~s--~dg~i~iwd~~~~~~~~~~~ 343 (421)
+.|++||+++ ++++..+..|...+ .+++|+|++ .++++++ .|+.|++||+.++ .....+
T Consensus 238 d~~v~iwd~~~-~~~~~~~~~~~~~v---------------~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~-~~~~~~ 300 (401)
T 4aez_A 238 DNVVQIWDARS-SIPKFTKTNHNAAV---------------KAVAWCPWQSNLLATGGGTMDKQIHFWNAATG-ARVNTV 300 (401)
T ss_dssp TSCEEEEETTC-SSEEEEECCCSSCC---------------CEEEECTTSTTEEEEECCTTTCEEEEEETTTC-CEEEEE
T ss_pred CCeEEEccCCC-CCccEEecCCcceE---------------EEEEECCCCCCEEEEecCCCCCEEEEEECCCC-CEEEEE
Confidence 9999999986 78888887777755 799999976 5566655 7999999999987 445555
Q ss_pred ecCCCCccceeeecCCcccccccceeee--ecccCc-ccCCCCC--c--cccccccccCeEEEEEccCCCeEEEec-CCc
Q 014644 344 EAGKNENRKPILQAAPRARRSSLSNLTR--GLYRQA-HENSSSG--H--HELSYNLSSKLLHLAWHPTTNLIACAN-GNS 415 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--g~~d~~-~iw~~~~--~--~~~~~~~~~~v~~~~~spd~~~la~~~-~~~ 415 (421)
. +...+..++|+++ +. .|++ |+.|+. ++|+... . .....+|...|.+++|+|++++|++++ ++.
T Consensus 301 ~-~~~~v~~~~~s~~--~~-----~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 301 D-AGSQVTSLIWSPH--SK-----EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp E-CSSCEEEEEECSS--SS-----EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred e-CCCcEEEEEECCC--CC-----eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 4 6678999999998 33 6776 668999 9994322 2 223457889999999999999999998 566
Q ss_pred eEEEeC
Q 014644 416 LFFHYA 421 (421)
Q Consensus 416 ~~i~~~ 421 (421)
+++|+.
T Consensus 373 i~iw~~ 378 (401)
T 4aez_A 373 LKFWRV 378 (401)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999974
No 66
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.3e-33 Score=247.64 Aligned_cols=243 Identities=19% Similarity=0.326 Sum_probs=199.8
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|++++| +|++++|++++.|++|++||+.+++
T Consensus 63 ~h~~~v~~~~~--~~~~~~l~s~~~d~~i~vwd~~~~~------------------------------------------ 98 (312)
T 4ery_A 63 GHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGK------------------------------------------ 98 (312)
T ss_dssp CCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTCC------------------------------------------
T ss_pred cCCCceEEEEE--cCCCCEEEEECCCCEEEEEECCCCc------------------------------------------
Confidence 68899999999 7899999999999999999998753
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
++..+ .+|...|.+++|+|++++|+++ .|++|++||++ .++....+ ..|..+
T Consensus 99 ------------------~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~-------~~~~~~ 151 (312)
T 4ery_A 99 ------------------CLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK-TGKCLKTL-------PAHSDP 151 (312)
T ss_dssp ------------------EEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-TCCEEEEE-------CCCSSC
T ss_pred ------------------EEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCEEEEEe-------cCCCCc
Confidence 22334 6889999999999999999999 99999999998 45555544 678899
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 268 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 268 (421)
|.+++|+|++ .+|++++.|+.|++||+++++.. ..+. ..+...+..++|+|++++|++++. +
T Consensus 152 v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~----~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 152 VSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCL----KTLI------------DDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp EEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE----EEEC------------CSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcee----eEEe------------ccCCCceEEEEECCCCCEEEEEcCCC
Confidence 9999999999 99999999999999999986543 1111 112567899999999999999876 9
Q ss_pred eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCC
Q 014644 269 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKN 348 (421)
Q Consensus 269 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 348 (421)
.|++||+++ ++.+..+.+|......+ ......+++++|++|+.||.|++||+.++ .....+.+|.+
T Consensus 215 ~i~iwd~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~ 280 (312)
T 4ery_A 215 TLKLWDYSK-GKCLKTYTGHKNEKYCI------------FANFSVTGGKWIVSGSEDNLVYIWNLQTK-EIVQKLQGHTD 280 (312)
T ss_dssp EEEEEETTT-TEEEEEECSSCCSSSCC------------CEEEECSSSCEEEECCTTSCEEEEETTTC-CEEEEECCCSS
T ss_pred eEEEEECCC-CcEEEEEEecCCceEEE------------EEEEEeCCCcEEEEECCCCEEEEEECCCc-hhhhhhhccCC
Confidence 999999986 88888887776543111 22233467899999999999999999987 67889999999
Q ss_pred CccceeeecCCcccccccceeeeec--ccCc-ccCCC
Q 014644 349 ENRKPILQAAPRARRSSLSNLTRGL--YRQA-HENSS 382 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~l~~g~--~d~~-~iw~~ 382 (421)
.+..++|+|+ ...|++++ .|+. ++|..
T Consensus 281 ~v~~~~~~p~-------~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 281 VVISTACHPT-------ENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp CEEEEEECSS-------SSEEEEEECTTTCCEEEEEC
T ss_pred cEEEEeecCc-------CCceEEEEccCCccEEEecC
Confidence 9999999998 33788775 6888 99943
No 67
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.1e-33 Score=252.45 Aligned_cols=249 Identities=10% Similarity=0.097 Sum_probs=202.4
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
...+.+ .+|.+.|++++|+|++++|++| .|++|++||..+ ......+ ..|...|.+++|+|++ ..|+++
T Consensus 55 ~~~~~l-~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~-~~~~~~~-------~~~~~~v~~~~~sp~g-~~lasg 124 (354)
T 2pbi_B 55 KTRRTL-KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT-TNKEHAV-------TMPCTWVMACAYAPSG-CAIACG 124 (354)
T ss_dssp CEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEE-------ECSSSCCCEEEECTTS-SEEEEE
T ss_pred EEEEEe-cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC-CCcceEE-------ecCCCCEEEEEECCCC-CEEEEe
Confidence 455667 8999999999999999999999 999999999984 4444433 5577889999999999 999999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
+.|+.+++|++........ ......+..|...|.+++|+|++..|++++. ++|++||+++ ++.+..+
T Consensus 125 ~~d~~i~v~~~~~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-~~~~~~~ 192 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENM-----------AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSF 192 (354)
T ss_dssp STTSEEEEEECCCCTTCCS-----------GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-CCEEEEE
T ss_pred eCCCCEEEEEEeccccccc-----------cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-CeEEEEE
Confidence 9999999999875421100 0011123456889999999999999999876 9999999987 8888999
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcC--CCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccc
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSG--DGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARR 363 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
.+|...+ .+++|+| ++++|++|+.||.|++||++++ .....+.+|...+.+++|+|+
T Consensus 193 ~~h~~~v---------------~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~~~p~----- 251 (354)
T 2pbi_B 193 HGHGADV---------------LCLDLAPSETGNTFVSGGCDKKAMVWDMRSG-QCVQAFETHESDVNSVRYYPS----- 251 (354)
T ss_dssp ECCSSCE---------------EEEEECCCSSCCEEEEEETTSCEEEEETTTC-CEEEEECCCSSCEEEEEECTT-----
T ss_pred cCCCCCe---------------EEEEEEeCCCCCEEEEEeCCCeEEEEECCCC-cEEEEecCCCCCeEEEEEeCC-----
Confidence 9888754 6788877 5789999999999999999987 667889999999999999998
Q ss_pred cccceeeeecccCc-ccCCCC--Cccccc--cccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 364 SSLSNLTRGLYRQA-HENSSS--GHHELS--YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 364 ~~~~~l~~g~~d~~-~iw~~~--~~~~~~--~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
...|++|+.|+. ++|+.. ...... ..+...+.+++|+|++++|++|+ ++.+++|+.
T Consensus 252 --~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 252 --GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp --SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred --CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 348999999999 999432 222211 12345789999999999999998 557999974
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.8e-33 Score=252.17 Aligned_cols=270 Identities=9% Similarity=0.027 Sum_probs=215.1
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|.+.|++++| +|++.+|++++.|+.|++||+.++...
T Consensus 9 ~h~~~v~~~~~--s~~~~~l~~~~~d~~v~iw~~~~~~~~---------------------------------------- 46 (342)
T 1yfq_A 9 APKDYISDIKI--IPSKSLLLITSWDGSLTVYKFDIQAKN---------------------------------------- 46 (342)
T ss_dssp CCSSCEEEEEE--EGGGTEEEEEETTSEEEEEEEETTTTE----------------------------------------
T ss_pred CCCCcEEEEEE--cCCCCEEEEEcCCCeEEEEEeCCCCcc----------------------------------------
Confidence 78999999999 578999999999999999998765300
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCC-EEEEE-cCCcEEEEeC-CCCceeeeeeecCCCCCCc--
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNL-EISDQCFNIVDMKPSNMDD-- 185 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~-~~~~~~~~~~~~~~~~~~~-- 185 (421)
.....+ .+|...|.+++|+|+++ +|+++ .|+.|++||+ . .++. .. +.+
T Consensus 47 -----------------~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~~~-~~-------~~~~~ 99 (342)
T 1yfq_A 47 -----------------VDLLQS-LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG-SPSF-QA-------LTNNE 99 (342)
T ss_dssp -----------------EEEEEE-EECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS-SSSE-EE-------CBSCC
T ss_pred -----------------ccceee-eecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc-CCce-Ee-------ccccC
Confidence 111222 47889999999999999 99998 9999999999 7 3433 22 366
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCc---------ccccccchhhhccccccCCCcccccccccceeEEEEc
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ---------SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 256 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~---------~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s 256 (421)
|...|.+++|+| + ..|++++.|+.|++||+++ ++.. ..+. |...+.+++|+
T Consensus 100 ~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~--------------~~~~v~~~~~~ 159 (342)
T 1yfq_A 100 ANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS----NNTK--------------VKNKIFTMDTN 159 (342)
T ss_dssp CCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCS----SSSS--------------SCCCEEEEEEC
T ss_pred CCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCee----eEEe--------------eCCceEEEEec
Confidence 999999999999 7 9999999999999999886 3322 2222 36789999999
Q ss_pred CCCCEEEEecC-CeEEEEECCC-CCccee-EEeeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCCCeEEEEe
Q 014644 257 NDGQHLLSRDY-MNLKLWDIRM-DSTPVA-TFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYSNLLRIFS 332 (421)
Q Consensus 257 ~~~~~l~~~~~-~~i~i~d~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~dg~i~iwd 332 (421)
|++ +++++. +.|++||++. ...... ....+...+ .+++|+| +++++++++.||.|++|+
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i---------------~~i~~~~~~~~~l~~~~~dg~i~i~~ 222 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI---------------RDVALLPKEQEGYACSSIDGRVAVEF 222 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCE---------------EEEEECSGGGCEEEEEETTSEEEEEE
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCce---------------eEEEECCCCCCEEEEEecCCcEEEEE
Confidence 988 666654 9999999985 333222 222333332 7999999 999999999999999999
Q ss_pred cCCC-----CCceeEEecCCC---------CccceeeecCCcccccccceeeeecccCc-ccC--CCCCcccccccc-cc
Q 014644 333 HGVG-----SAGGITVEAGKN---------ENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNL-SS 394 (421)
Q Consensus 333 ~~~~-----~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~-~~ 394 (421)
++.. ......+..|.. ++..++|+|+ + .+|++++.|+. ++| ..++.+....+| ..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~-----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~ 295 (342)
T 1yfq_A 223 FDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR--H-----KFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295 (342)
T ss_dssp CCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT--T-----CCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred EcCCCcccccccceeeecccccccccccceeEEEEEEcCC--C-----CEEEEecCCceEEEEcCccHhHhhhhhcccCC
Confidence 9876 366778888866 9999999998 3 38999999999 999 334555666677 89
Q ss_pred CeEEEEEccCCCeEEEecCCc
Q 014644 395 KLLHLAWHPTTNLIACANGNS 415 (421)
Q Consensus 395 ~v~~~~~spd~~~la~~~~~~ 415 (421)
.|.+++ |++++|++++.|+
T Consensus 296 ~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 296 SVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEEEEE--ECSSEEEEEEECT
T ss_pred CceEec--CCCCeEEEEecCC
Confidence 999999 9999999998554
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=253.89 Aligned_cols=337 Identities=15% Similarity=0.131 Sum_probs=219.3
Q ss_pred ccccccEEEEEEEEcC-CCCeEEEEeCCCcEEEeecCCceeEEeee------------cCCCCCcccccccccccceeec
Q 014644 30 LEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKE------------MDHFPFVSSENTLLAEKNFMNE 96 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~-~~~~l~t~s~d~~v~lwd~~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~~~~~ 96 (421)
.+|.+.|++++| +| ++++|++|+.||+|++||+.+++...... ..+.. .+.++
T Consensus 40 ~~h~~~v~~~~~--s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~ 105 (408)
T 4a11_B 40 RIHGGGINTLDI--EPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY------------SVETV 105 (408)
T ss_dssp CCCSSCEEEEEE--CTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS------------CEEEE
T ss_pred eccCCcEEEEEE--ecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC------------cEEEE
Confidence 369999999999 78 89999999999999999998876221111 11344 44445
Q ss_pred cCCC-CceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC---CCEEEEE-cCCcEEEEeCCCCce
Q 014644 97 HNPP-SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD---CETFVSA-DDLRINLWNLEISDQ 171 (421)
Q Consensus 97 ~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~-~d~~i~lwd~~~~~~ 171 (421)
.+.+ ....++.++. ++.+++|++... ++...+ .+...+.++.++|. +.+++++ .|+.|++||++ .++
T Consensus 106 ~~~~~~~~~l~s~~~--d~~i~iwd~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~ 177 (408)
T 4a11_B 106 QWYPHDTGMFTSSSF--DKTLKVWDTNTL---QTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK-SGS 177 (408)
T ss_dssp EECTTCTTCEEEEET--TSEEEEEETTTT---EEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS-SSC
T ss_pred EEccCCCcEEEEEeC--CCeEEEeeCCCC---ccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC-Ccc
Confidence 5544 4445555544 568999999887 676666 47788999999884 4589998 99999999998 455
Q ss_pred eeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccc--cccCCCcccccccccc
Q 014644 172 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDA--AESHGSKSFFTEIIAS 249 (421)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h--~~~~~~~~~~~~~~~~ 249 (421)
....+ .+|...|.+++|+|++..+|++++.||.|++||++.+.... ..+..+ ............|...
T Consensus 178 ~~~~~-------~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 178 CSHIL-------QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCL---ITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp CCEEE-------CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCS---EECCTTTTCSCCCTTTSSCSCSSC
T ss_pred eeeee-------cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccc---ccccccccccceeeccccccccCc
Confidence 55444 67999999999999994469999999999999998865321 222111 1111222334667899
Q ss_pred eeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeE
Q 014644 250 ISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLL 328 (421)
Q Consensus 250 v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i 328 (421)
|.+++|+|++++|++++. +.|++||+++ ++....+..+....... .. ........+..+++++.++.|
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~i 316 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSN-GENTLVNYGKVCNNSKK-------GL---KFTVSCGCSSEFVFVPYGSTI 316 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTT-CCBCCCCCCCCCCCCSS-------CC---CCEECCSSSSCEEEEEETTEE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCC-Cccceeccccccccccc-------cc---eeEEecCCCceEEEEecCCEE
Confidence 999999999999999875 9999999986 55443333222111000 00 111222334556777889999
Q ss_pred EEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC--CCccccccccccCeEEEEEccCC
Q 014644 329 RIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SGHHELSYNLSSKLLHLAWHPTT 405 (421)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~~~~~~v~~~~~spd~ 405 (421)
++||+.++ .....+.+|...+..++|+|+ ..+|++|+.||. ++|+. .+.+....... ....+.|..
T Consensus 317 ~v~d~~~~-~~~~~~~~~~~~v~~~~~s~~-------~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~ 385 (408)
T 4a11_B 317 AVYTVYSG-EQITMLKGHYKTVDCCVFQSN-------FQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAF 385 (408)
T ss_dssp EEEETTTC-CEEEEECCCSSCEEEEEEETT-------TTEEEEEETTSCEEEEEECC-----------------------
T ss_pred EEEECcCC-cceeeeccCCCeEEEEEEcCC-------CCEEEEECCCCeEEEEeCCCCCccCCCCceE---ecccccccc
Confidence 99999987 778889999999999999998 348999999999 99933 22222211111 122344433
Q ss_pred Ce--EEEecCCceEEEe
Q 014644 406 NL--IACANGNSLFFHY 420 (421)
Q Consensus 406 ~~--la~~~~~~~~i~~ 420 (421)
.. ...+.++.+.+|+
T Consensus 386 ~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 386 EDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp -----------------
T ss_pred ceeecccCccCceeecC
Confidence 22 2333467799886
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-32 Score=268.06 Aligned_cols=315 Identities=9% Similarity=0.006 Sum_probs=237.6
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCc----eeEEeeecCCCCCcccccccccccc-eeeccCCC--Cc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQ----KVKKIKEMDHFPFVSSENTLLAEKN-FMNEHNPP--SF 102 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~--~~ 102 (421)
..|...|++++| +|++++|++++ ++.|++||+.++ +..... ..|.. . +.++.+++ ++
T Consensus 15 ~~~~~~v~~~~~--spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~-~~h~~------------~~v~~~~~sp~~~~ 78 (615)
T 1pgu_A 15 STQRNFTTHLSY--DPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQF-TGHGS------------SVVTTVKFSPIKGS 78 (615)
T ss_dssp CCCTTCCCCCEE--ETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEE-CTTTT------------SCEEEEEECSSTTC
T ss_pred CCccCceeEEEE--CCCCCEEEEec-CCeEEEEECCCCCCccccceEE-ecCCC------------ceEEEEEECcCCCC
Confidence 367889999999 79999999998 889999999987 422221 12333 4 66666677 77
Q ss_pred eeeeecccccccceeEEeecccc-----eeeeeeeecCCCCcceEEEeecCCCCEEEEE-cC----CcEEEEeCCCCcee
Q 014644 103 AHGYHLEWTENMATKIANVGNSV-----HARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQC 172 (421)
Q Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d----~~i~lwd~~~~~~~ 172 (421)
.+++.++. ++.+++|++.+.. ..+.+..+ ..|...|.+++|+|++++|+++ .+ +.|++||.. +.
T Consensus 79 ~~l~s~~~--dg~v~vw~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~ 152 (615)
T 1pgu_A 79 QYLCSGDE--SGKVIVWGWTFDKESNSVEVNVKSEF-QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NS 152 (615)
T ss_dssp CEEEEEET--TSEEEEEEEEEEGGGTEEEEEEEEEE-ECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CE
T ss_pred CEEEEecC--CCEEEEEeCCCCcccccccccccchh-hcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---Cc
Confidence 77777765 6789999996431 23566677 7899999999999999999998 66 688888833 33
Q ss_pred eeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccccc---c
Q 014644 173 FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA---S 249 (421)
Q Consensus 173 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~---~ 249 (421)
... +.+|...|.+++|+|+++..+++++.|+.|++||+.+++.. ..+.. |.. .
T Consensus 153 ~~~-------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~----~~~~~-------------~~~~~~~ 208 (615)
T 1pgu_A 153 LGE-------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS----ASDRT-------------HHKQGSF 208 (615)
T ss_dssp EEE-------CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE----EEECS-------------SSCTTCC
T ss_pred cee-------eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee----eeecc-------------cCCCCce
Confidence 333 37899999999999999448999999999999999886543 33333 366 8
Q ss_pred eeEEEEcCC-CCEEEEecC-CeEEEEECCCCCcceeEE-e---eccCcccccccccCCCcceeeeEEEEcCCCCEEEEee
Q 014644 250 ISDIKFAND-GQHLLSRDY-MNLKLWDIRMDSTPVATF-K---IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 323 (421)
Q Consensus 250 v~~~~~s~~-~~~l~~~~~-~~i~i~d~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s 323 (421)
|.+++|+|+ +++|++++. +.|++||+++ ++.+..+ . .|...+ .+++|+ ++++|++++
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~v---------------~~~~~~-~~~~l~~~~ 271 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKS-GEFLKYIEDDQEPVQGGI---------------FALSWL-DSQKFATVG 271 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTT-CCEEEECCBTTBCCCSCE---------------EEEEES-SSSEEEEEE
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCC-CCEeEEecccccccCCce---------------EEEEEc-CCCEEEEEc
Confidence 999999999 999999875 9999999986 7777777 4 566544 799999 999999999
Q ss_pred CCCeEEEEecCCCCCceeEEecCC----CCccceeeecCCcccccccceeeeecccCc-ccCCC--CCccccccccccCe
Q 014644 324 YSNLLRIFSHGVGSAGGITVEAGK----NENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SGHHELSYNLSSKL 396 (421)
Q Consensus 324 ~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~~~~~~v 396 (421)
.||.|++||+.++ .....+..+. ..+..+.+. + ...+++++.++. ++|+. ++......+|...|
T Consensus 272 ~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v 342 (615)
T 1pgu_A 272 ADATIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVVAT-G-------NGRIISLSLDGTLNFYELGHDEVLKTISGHNKGI 342 (615)
T ss_dssp TTSEEEEEETTTT-EEEEEEECCTTCGGGCEEEEEEE-E-------TTEEEEEETTSCEEEEETTEEEEEEEECCCSSCE
T ss_pred CCCcEEEEECCCC-cEEEEEcCCCCcccCceeEEEeC-C-------CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCE
Confidence 9999999999987 5566666663 444455553 2 237888888888 88833 34444555677777
Q ss_pred EEEEEccCCCeEEEec-CCceEEEe
Q 014644 397 LHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 397 ~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
.+++| |+ |++++ ++.+++|+
T Consensus 343 ~~~~~-~~---l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 343 TALTV-NP---LISGSYDGRIMEWS 363 (615)
T ss_dssp EEEET-TT---TEEEETTSCEEETT
T ss_pred EEEEe-cC---cEEECCCCeEEEEE
Confidence 77777 66 34333 55566664
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-33 Score=253.42 Aligned_cols=256 Identities=16% Similarity=0.117 Sum_probs=192.0
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeec-CCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|.+.|++++| ++++++|++|+.||+|+|||+........... .|...|.+++|.++. +..+++.+
T Consensus 8 ~~h~~~v~~~~~--s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------~~~~l~s~ 75 (379)
T 3jrp_A 8 NAHNELIHDAVL--DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK----------FGTILASC 75 (379)
T ss_dssp EECCCCEEEEEE--CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG----------GCSEEEEE
T ss_pred cCCcccEEEEEE--cCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC----------CCCEEEEe
Confidence 478999999999 78999999999999999999985543333322 355555555554321 14555555
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
+. ++.+++|++.... ...+..+ .+|...|.+++|+|+ +++|+++ .|+.|++||++........ .+..
T Consensus 76 ~~--dg~v~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~------~~~~ 145 (379)
T 3jrp_A 76 SY--DGKVLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------IIDA 145 (379)
T ss_dssp ET--TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE------EEEC
T ss_pred cc--CCEEEEEEcCCCc-eeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE------EecC
Confidence 54 5689999998761 1256666 789999999999999 9999999 9999999999844222211 2367
Q ss_pred cCCCeeEEEEec-------------CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 186 LTEVITSAEFHP-------------IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 186 ~~~~v~~~~~~p-------------~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
|...|.+++|+| ++ .+|++++.|+.|++||++.+.........+ ..|...|.+
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~h~~~v~~ 211 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTL-------------EGHSDWVRD 211 (379)
T ss_dssp CTTCEEEEEECCCC----------CTT-CEEEEEETTSCEEEEEEETTTTEEEEEEEE-------------CCCSSCEEE
T ss_pred CCCceEEEEEcCccccccccccCCCCC-CEEEEEeCCCeEEEEEecCCCcceeeEEEE-------------ecccCcEeE
Confidence 889999999999 57 899999999999999998754322112222 345889999
Q ss_pred EEEcCC---CCEEEEecC-CeEEEEECCCCCccee-EE-e--eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC
Q 014644 253 IKFAND---GQHLLSRDY-MNLKLWDIRMDSTPVA-TF-K--IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY 324 (421)
Q Consensus 253 ~~~s~~---~~~l~~~~~-~~i~i~d~~~~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~ 324 (421)
++|+|+ +++|++++. +.|++||++....... .. . .+... +.+++|+|++++|++++.
T Consensus 212 ~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 212 VAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV---------------LWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC---------------EEEEEECSSSCCEEEEES
T ss_pred EEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCc---------------EEEEEEcCCCCEEEEecC
Confidence 999999 899999875 9999999986322211 11 1 12222 279999999999999999
Q ss_pred CCeEEEEecCCC
Q 014644 325 SNLLRIFSHGVG 336 (421)
Q Consensus 325 dg~i~iwd~~~~ 336 (421)
||.|++|++...
T Consensus 277 dg~i~iw~~~~~ 288 (379)
T 3jrp_A 277 DNKVTLWKENLE 288 (379)
T ss_dssp SSSEEEEEEEET
T ss_pred CCcEEEEeCCCC
Confidence 999999999865
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.4e-32 Score=250.17 Aligned_cols=278 Identities=11% Similarity=0.130 Sum_probs=222.1
Q ss_pred EEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccc
Q 014644 36 INRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMA 115 (421)
Q Consensus 36 V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 115 (421)
++.|+| ++ +++||+|. |++|+|||..+++.......+.+. ..|.++++++++.+++.|+. ++.
T Consensus 108 ~~~l~w--S~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~-----------~~V~sv~fspdg~~lasgs~--Dg~ 170 (420)
T 4gga_A 108 LNLVDW--SS-GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPG-----------EYISSVAWIKEGNYLAVGTS--SAE 170 (420)
T ss_dssp CBCEEE--CT-TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTT-----------CCEEEEEECTTSSEEEEEET--TSC
T ss_pred ceeEEE--CC-CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCC-----------CcEEEEEECCCCCEEEEEEC--CCe
Confidence 567999 44 45776665 999999999999855444433222 24566666777888888776 678
Q ss_pred eeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEE
Q 014644 116 TKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
+++|++++. ++++.+ .+|...+.+++++ +.+|++| .|+.+++||.......+..+ .+|...+..+.
T Consensus 171 v~iWd~~~~---~~~~~~-~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~-------~~h~~~~~~~~ 237 (420)
T 4gga_A 171 VQLWDVQQQ---KRLRNM-TSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATL-------SGHSQEVCGLR 237 (420)
T ss_dssp EEEEETTTT---EEEEEE-CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEE-------ECCSSCEEEEE
T ss_pred EEEEEcCCC---cEEEEE-eCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEe-------cccccceeeee
Confidence 999999988 888888 8999999998875 6799999 99999999998555555544 78999999999
Q ss_pred EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEEEe--c-CCeE
Q 014644 195 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSR--D-YMNL 270 (421)
Q Consensus 195 ~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~-~~~i 270 (421)
|+|++ .++++++.|+.+++||...++........ ...|...|.+++|+|++. +++++ + |+.|
T Consensus 238 ~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~-------------~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 238 WAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQT-------------FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp ECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEE-------------ECCCSSCEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred ecCCC-CeeeeeeccccceEEeeccccccceeeee-------------ecccCCceeeeeeCCCcccEEEEEeecCCCEE
Confidence 99999 99999999999999999886533221222 234578999999999765 44443 3 3999
Q ss_pred EEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee--CCCeEEEEecCCCCCceeEEecCCC
Q 014644 271 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS--YSNLLRIFSHGVGSAGGITVEAGKN 348 (421)
Q Consensus 271 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~ 348 (421)
++||+++ +++...+..+... .++.|+|+++.+++++ .|+.|+|||+.++ .....+.+|.+
T Consensus 304 ~iwd~~t-~~~~~~~~~~~~v----------------~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~-~~v~~l~gH~~ 365 (420)
T 4gga_A 304 RIWNVCS-GACLSAVDAHSQV----------------CSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGHTS 365 (420)
T ss_dssp EEEETTT-TEEEEEEECSSCE----------------EEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCCSS
T ss_pred EEEeCCc-cccceeeccccce----------------eeeeecCCCCeEEEEEecCCCEEEEEECCCC-cEEEEEcCCCC
Confidence 9999987 8888877766543 6899999999988765 7999999999987 77889999999
Q ss_pred CccceeeecCCcccccccceeeeecccCc-ccCCC
Q 014644 349 ENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
.|..++|+|+ + .+|++|+.|+. ++|+.
T Consensus 366 ~V~~l~~spd--g-----~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 366 RVLSLTMSPD--G-----ATVASAAADETLRLWRC 393 (420)
T ss_dssp CEEEEEECTT--S-----SCEEEEETTTEEEEECC
T ss_pred CEEEEEEcCC--C-----CEEEEEecCCeEEEEEC
Confidence 9999999998 3 48999999999 99944
No 73
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-32 Score=255.27 Aligned_cols=279 Identities=13% Similarity=0.155 Sum_probs=220.3
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|++++| +|++++|++++.||.|++||........+. .+.. .+.++.++++...+..++.
T Consensus 106 ~~~~~v~~~~~--s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--~~~~------------~v~~~~~~~~~~~l~~~~~ 169 (425)
T 1r5m_A 106 KTTNQVTCLAW--SHDGNSIVTGVENGELRLWNKTGALLNVLN--FHRA------------PIVSVKWNKDGTHIISMDV 169 (425)
T ss_dssp --CBCEEEEEE--CTTSSEEEEEETTSCEEEEETTSCEEEEEC--CCCS------------CEEEEEECTTSSEEEEEET
T ss_pred CCCCceEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCeeeecc--CCCc------------cEEEEEECCCCCEEEEEec
Confidence 36889999999 789999999999999999994443333332 2444 3445555556666665554
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcc---------------eEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeee
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFN---------------INSISNNSDCETFVSA-DDLRINLWNLEISDQCFN 174 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~---------------v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~ 174 (421)
++.+++|++.+. +.+..+ ..+... +.+++|+|++. ++++ .|+.|++||+. ..+...
T Consensus 170 --d~~i~iwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~-~~~~~~ 241 (425)
T 1r5m_A 170 --ENVTILWNVISG---TVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQIT-EKTPTG 241 (425)
T ss_dssp --TCCEEEEETTTT---EEEEEE-CCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETT-CSSCSE
T ss_pred --CCeEEEEECCCC---cEEEEe-eccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcC-CCceee
Confidence 567999999887 777777 666666 99999999865 5666 99999999998 444444
Q ss_pred eeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEE
Q 014644 175 IVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK 254 (421)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~ 254 (421)
.+ ..|...|.+++|+|++ .+|++++.|+.|++||++.++.. ..+.. |...+.+++
T Consensus 242 ~~-------~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~----~~~~~-------------~~~~i~~~~ 296 (425)
T 1r5m_A 242 KL-------IGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQ----NCFYG-------------HSQSIVSAS 296 (425)
T ss_dssp EE-------CCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCS----EEECC-------------CSSCEEEEE
T ss_pred ee-------ccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccc----eEecC-------------CCccEEEEE
Confidence 43 6788999999999999 89999999999999999886543 33333 477899999
Q ss_pred EcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 255 FANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 255 ~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
|+|++ ++++++. +.|++||+++ ++.+..+..|...+ .+++|+|++++|++++.||.|++||+
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i---------------~~~~~s~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPI---------------FAGRISQDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCE---------------EEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred ECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccE---------------EEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 99999 7777765 9999999986 88888888777654 79999999999999999999999999
Q ss_pred CCCC-------------------CceeEEecCCC--CccceeeecCCcccccccceeeeecccCc-ccCCC
Q 014644 334 GVGS-------------------AGGITVEAGKN--ENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 334 ~~~~-------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
.++. .....+.+|.. .+..+.|+|+ + .+|++++.|+. ++|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~-----~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 360 KKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA--G-----NKISVAYSLQEGSVVAI 423 (425)
T ss_dssp HHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT--S-----SEEEEEESSSCCEEEEC
T ss_pred CCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC--C-----ceEEEEecCceEEEEee
Confidence 8763 16778888976 9999999998 3 38999999998 99943
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=247.68 Aligned_cols=273 Identities=14% Similarity=0.166 Sum_probs=209.2
Q ss_pred ccccccEEEEEEEEcCC---CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 30 LEIEEKINRVRWCAAPN---GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~---~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
.+|.+.|++++| +|+ +++|++|+.||.|+|||+.+...
T Consensus 36 ~~h~~~v~~~~~--~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------------------------------------- 76 (368)
T 3mmy_A 36 SSPDDSIGCLSF--SPPTLPGNFLIAGSWANDVRCWEVQDSGQ------------------------------------- 76 (368)
T ss_dssp SCCSSCEEEEEE--CCTTSSSEEEEEEETTSEEEEEEECTTSC-------------------------------------
T ss_pred cCCCCceEEEEE--cCCCCCceEEEEECCCCcEEEEEcCCCCc-------------------------------------
Confidence 479999999999 677 69999999999999999987320
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
.....+ .+|...|.+++|+|++++|+++ .|+.|++||++ .++.... ..
T Consensus 77 ---------------------~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~--------~~ 125 (368)
T 3mmy_A 77 ---------------------TIPKAQ-QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS-SNQAIQI--------AQ 125 (368)
T ss_dssp ---------------------EEEEEE-EECSSCEEEEEECTTSSEEEEEETTSEEEEEETT-TTEEEEE--------EE
T ss_pred ---------------------eeEEEe-ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC-CCCceee--------cc
Confidence 111233 6799999999999999999999 99999999998 5555543 46
Q ss_pred cCCCeeEEEE--ecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE
Q 014644 186 LTEVITSAEF--HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 263 (421)
Q Consensus 186 ~~~~v~~~~~--~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (421)
|...|.+++| +|++ .+|++++.|+.|++||+++++.. ..+.. ...+.++.+.+ ..++
T Consensus 126 ~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~----~~~~~--------------~~~~~~~~~~~--~~~~ 184 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPM----MVLQL--------------PERCYCADVIY--PMAV 184 (368)
T ss_dssp CSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCS----EEEEC--------------SSCEEEEEEET--TEEE
T ss_pred ccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEE----EEEec--------------CCCceEEEecC--CeeE
Confidence 8999999999 8888 89999999999999999987543 33333 23566666664 3555
Q ss_pred Ee-cCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCE----EEEeeCCCeEEEEecCCCC-
Q 014644 264 SR-DYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH----FATGSYSNLLRIFSHGVGS- 337 (421)
Q Consensus 264 ~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~----l~~~s~dg~i~iwd~~~~~- 337 (421)
++ .++.+++|+++............... ....+++.++... +++++.||.|++|+++...
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~ 250 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKH--------------QHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSS--------------CEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH
T ss_pred EEeCCCcEEEEEeccccchhhhccccccC--------------CCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc
Confidence 55 44999999998633333322211111 0134555554443 9999999999999998764
Q ss_pred -CceeEEecCCC------------CccceeeecCCcccccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEE
Q 014644 338 -AGGITVEAGKN------------ENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAW 401 (421)
Q Consensus 338 -~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~ 401 (421)
.....+.+|.. ++..++|+|+ + .+|++|+.|+. ++| ..++.+....+|...|.+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 323 (368)
T 3mmy_A 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV--H-----GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCF 323 (368)
T ss_dssp HHHSEEEECSEEC----CCCEEECCEEEEEECTT--T-----CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEE
T ss_pred cccceeeeeeecccccccccccccceEEEEEecC--C-----CEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEE
Confidence 34667778876 7999999998 3 38999999999 999 344556666788999999999
Q ss_pred ccCCCeEEEecCC
Q 014644 402 HPTTNLIACANGN 414 (421)
Q Consensus 402 spd~~~la~~~~~ 414 (421)
+|++++||+++.+
T Consensus 324 s~~g~~l~~~s~d 336 (368)
T 3mmy_A 324 NHNGNIFAYASSY 336 (368)
T ss_dssp CTTSSCEEEEECC
T ss_pred CCCCCeEEEEecc
Confidence 9999999999854
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-31 Score=235.99 Aligned_cols=277 Identities=12% Similarity=0.154 Sum_probs=203.2
Q ss_pred EEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccc
Q 014644 36 INRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMA 115 (421)
Q Consensus 36 V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 115 (421)
+++|+| +++ ++||+| .|++|+|||+++++.......+.+. ..+.++.+++++.+++.|+. ++.
T Consensus 28 ~~~l~W--S~~-~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~-----------~~V~~v~~~~~~~~l~sgs~--Dg~ 90 (318)
T 4ggc_A 28 LNLVDW--SSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPG-----------EYISSVAWIKEGNYLAVGTS--SAE 90 (318)
T ss_dssp CBCEEE--CTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTT-----------CCEEEEEECTTSSEEEEEET--TSE
T ss_pred ceEEEE--CCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCC-----------CeEEEEEECCCCCEEEEEEC--CCc
Confidence 477999 555 466655 5999999999998854443332222 24666677777888888776 678
Q ss_pred eeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEE
Q 014644 116 TKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
+++|+.++. ++++.+ .+|...+.++.+ ++..++++ .++.+++|+..........+ .+|...+..+.
T Consensus 91 v~iw~~~~~---~~~~~~-~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 157 (318)
T 4ggc_A 91 VQLWDVQQQ---KRLRNM-TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATL-------SGHSQEVCGLR 157 (318)
T ss_dssp EEEEETTTT---EEEEEE-ECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE-------ECCSSCEEEEE
T ss_pred EEEeecCCc---eeEEEe-cCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEE-------cCccCceEEEE
Confidence 999999988 888888 899998877665 56799998 99999999998555555544 78999999999
Q ss_pred EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE---EecC-CeE
Q 014644 195 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL---SRDY-MNL 270 (421)
Q Consensus 195 ~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~---~~~~-~~i 270 (421)
+++++ .+|++++.|+.|++||+++++........ ...+...+..++++|++..++ +++. +.|
T Consensus 158 ~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i 223 (318)
T 4ggc_A 158 WAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQT-------------FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 223 (318)
T ss_dssp ECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEE-------------ECCCCSCEEEEEECTTSTTEEEEEECTTTCEE
T ss_pred EcCCC-CEEEEEecCcceeEEECCCCcccccceee-------------ecccCCceEEEEecCCCCcEEEEEecCCCCEE
Confidence 99999 99999999999999999987543211111 123467899999999866443 3444 899
Q ss_pred EEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee--CCCeEEEEecCCCCCceeEEecCCC
Q 014644 271 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS--YSNLLRIFSHGVGSAGGITVEAGKN 348 (421)
Q Consensus 271 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~ 348 (421)
++||.+. ......... ...+ ..++|+|++..+++++ .|+.|++||++++ .....+.+|
T Consensus 224 ~lwd~~~-~~~~~~~~~-~~~v---------------~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-~~~~~l~gH-- 283 (318)
T 4ggc_A 224 RIWNVCS-GACLSAVDA-HSQV---------------CSILWSPHYKELISGHGFAQNQLVIWKYPTM-AKVAELKGH-- 283 (318)
T ss_dssp EEEETTT-CCEEEEEEC-SSCE---------------EEEEEETTTTEEEEEECTTTCCEEEEETTTC-CEEEEECCC--
T ss_pred EEEeccc-ccccccccc-eeee---------------eeeeecccccceEEEEEcCCCEEEEEECCCC-cEEEEEcCC--
Confidence 9999986 554444433 3322 6889999998887654 7999999999987 444555544
Q ss_pred CccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 349 ENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
...|++++|+||+++||+|+ ++.|+||+
T Consensus 284 --------------------------------------------~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 284 --------------------------------------------TSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp --------------------------------------------SSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred --------------------------------------------CCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 45566677777777777666 34467775
No 76
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.9e-33 Score=256.00 Aligned_cols=241 Identities=13% Similarity=0.122 Sum_probs=189.9
Q ss_pred CCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCc------eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 135 HAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISD------QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 135 ~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
.+|.+.|.+++|+| ++++|++| .|++|++||+.... +.... +.+|...|.+++|+|++..+|+++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~-------~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVIT-------LEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEE-------EECCSSCEEEEEECSSBTTEEEEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEE-------ecCCCCeEEEEEECcCCCCEEEEE
Confidence 78999999999999 99999999 99999999998432 22332 378999999999999975699999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
+.|+.|++||+++++.. ..+.. ..|...|.+++|+|++++|++++. +.|++||+++ ++.+..+
T Consensus 151 ~~dg~i~iwd~~~~~~~----~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~ 214 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAV----LTLGP-----------DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK-GTVVAEK 214 (402)
T ss_dssp ETTSCEEEEETTTTEEE----EEECT-----------TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEE
T ss_pred cCCCEEEEEECCCCCcc----EEEec-----------CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC-Cceeeee
Confidence 99999999999987543 33310 224789999999999999999875 9999999986 7777777
Q ss_pred -eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe---eCCCeEEEEecCCCCCceeEE-ecCCCCccceeeecCCc
Q 014644 286 -KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG---SYSNLLRIFSHGVGSAGGITV-EAGKNENRKPILQAAPR 360 (421)
Q Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~---s~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (421)
..|.... +.+++|+|++++|++| +.|+.|++||+++........ ..|...+..+.|+|+
T Consensus 215 ~~~~~~~~--------------~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~-- 278 (402)
T 2aq5_A 215 DRPHEGTR--------------PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD-- 278 (402)
T ss_dssp ECSSCSSS--------------CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT--
T ss_pred ccCCCCCc--------------ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC--
Confidence 5665531 1689999999999999 789999999999875534333 357788999999998
Q ss_pred cccccccee-eeecccCc-ccCC--CCCc-ccccc--ccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 361 ARRSSLSNL-TRGLYRQA-HENS--SSGH-HELSY--NLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 361 ~~~~~~~~l-~~g~~d~~-~iw~--~~~~-~~~~~--~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
+. .| ++|+.|+. ++|+ .++. +.... .+...|.+++|+|++.++++ +++.+++|+
T Consensus 279 ~~-----~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s-~~~~~~~~~ 339 (402)
T 2aq5_A 279 TN-----IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN-KCEIARFYK 339 (402)
T ss_dssp TT-----EEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG-GTEEEEEEE
T ss_pred CC-----EEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee-cceeEEEEE
Confidence 33 56 46778998 9993 3332 22333 34589999999999998875 445788886
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.2e-32 Score=252.18 Aligned_cols=267 Identities=15% Similarity=0.254 Sum_probs=217.5
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|.++.| +++++++|+.||+|++||+.+++
T Consensus 131 ~~~~~v~~~~~----d~~~l~~g~~dg~i~iwd~~~~~------------------------------------------ 164 (435)
T 1p22_A 131 ETSKGVYCLQY----DDQKIVSGLRDNTIKIWDKNTLE------------------------------------------ 164 (435)
T ss_dssp SSCCCEEEEEC----CSSEEEEEESSSCEEEEESSSCC------------------------------------------
T ss_pred CCCCcEEEEEE----CCCEEEEEeCCCeEEEEeCCCCe------------------------------------------
Confidence 56677888877 58899999999999999987753
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
++..+ .+|...|.+++| ++++|++| .||+|++||+. .++....+ .+|...
T Consensus 165 ------------------~~~~~-~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~-~~~~~~~~-------~~h~~~ 215 (435)
T 1p22_A 165 ------------------CKRIL-TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN-TGEMLNTL-------IHHCEA 215 (435)
T ss_dssp ------------------EEEEE-CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-SCCEEEEE-------CCCCSC
T ss_pred ------------------EEEEE-cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-CCcEEEEE-------cCCCCc
Confidence 23334 789999999999 78899999 99999999998 55555544 679999
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 268 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 268 (421)
|.+++|++ ..+++++.||.|++||++++.... .... +.+|...|.+++| +++++++++. +
T Consensus 216 v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~-~~~~-------------~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 216 VLHLRFNN---GMMVTCSKDRSIAVWDMASPTDIT-LRRV-------------LVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp EEEEECCT---TEEEEEETTSCEEEEECSSSSCCE-EEEE-------------ECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred EEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCce-eeeE-------------ecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999974 689999999999999998765321 0011 2345789999999 6889998875 9
Q ss_pred eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCC
Q 014644 269 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKN 348 (421)
Q Consensus 269 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~ 348 (421)
.|++||+++ ++.+..+.+|...+ .+++| +++++++|+.||.|++||++++ .....+.+|..
T Consensus 277 ~i~vwd~~~-~~~~~~~~~~~~~v---------------~~~~~--~~~~l~~g~~dg~i~iwd~~~~-~~~~~~~~h~~ 337 (435)
T 1p22_A 277 TIKVWNTST-CEFVRTLNGHKRGI---------------ACLQY--RDRLVVSGSSDNTIRLWDIECG-ACLRVLEGHEE 337 (435)
T ss_dssp EEEEEETTT-CCEEEEEECCSSCE---------------EEEEE--ETTEEEEEETTSCEEEEETTTC-CEEEEECCCSS
T ss_pred eEEEEECCc-CcEEEEEcCCCCcE---------------EEEEe--CCCEEEEEeCCCeEEEEECCCC-CEEEEEeCCcC
Confidence 999999987 88888888887754 67777 5789999999999999999987 77888999999
Q ss_pred CccceeeecCCcccccccceeeeecccCc-ccCCC--CC---------ccccccccccCeEEEEEccCCCeEEEec-CCc
Q 014644 349 ENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS--SG---------HHELSYNLSSKLLHLAWHPTTNLIACAN-GNS 415 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~---------~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~ 415 (421)
.+.++.+.+. .|++|+.||. ++|+. +. ......+|...|.+++| +++.|++++ ++.
T Consensus 338 ~v~~~~~~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~ 406 (435)
T 1p22_A 338 LVRCIRFDNK---------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDT 406 (435)
T ss_dssp CEEEEECCSS---------EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSE
T ss_pred cEEEEEecCC---------EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCE
Confidence 9999998433 8999999999 99932 11 34456688999999999 788899998 667
Q ss_pred eEEEeC
Q 014644 416 LFFHYA 421 (421)
Q Consensus 416 ~~i~~~ 421 (421)
+++|+.
T Consensus 407 i~iwd~ 412 (435)
T 1p22_A 407 ILIWDF 412 (435)
T ss_dssp EEEEC-
T ss_pred EEEEEC
Confidence 999973
No 78
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.4e-32 Score=249.93 Aligned_cols=260 Identities=10% Similarity=0.047 Sum_probs=163.8
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEec--------CCCCeEEE
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHP--------IYCNLLAY 205 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--------~~~~~l~s 205 (421)
..|...+....+.+++.+|+++ .|++|+|||.+ .++......+ ..+.+|.+.|.+++|+| ++ ++|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~-~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las 161 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITK-NETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAE-QVIAS 161 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEE-TTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEE
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECC-CCccceeeee--cccCCCCCceEEEEEccccccccCCCC-CEEEE
Confidence 4556666666777788899999 99999999998 4433221111 35689999999999998 77 89999
Q ss_pred EEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEEEecC-CeEEEEECCCCCccee
Q 014644 206 SSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLLSRDY-MNLKLWDIRMDSTPVA 283 (421)
Q Consensus 206 ~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~-~~i~i~d~~~~~~~~~ 283 (421)
++.|++|++||++++... ..+.. |...+.+++|+|++. +|++++. ++|++||+++ ++...
T Consensus 162 ~s~D~tv~~Wd~~~~~~~----~~~~~-------------~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t-~~~~~ 223 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPI----LAGYP-------------LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTL-NLSAE 223 (393)
T ss_dssp EETTSEEEEEEEETTEEE----EEEEE-------------CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC-CC---
T ss_pred EECCCeEEEEECCCCcee----eeecC-------------CCCCcEEEEECCCCCceEEecCCCCEEEEEECCC-Ccccc
Confidence 999999999999876533 22222 367899999999875 6888865 9999999986 44333
Q ss_pred EEeeccCccccc------------c-cccCCCcceeeeEEEEc-CCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCC
Q 014644 284 TFKIHEHLRPKL------------C-DLYNNDSIFDKFECSVS-GDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNE 349 (421)
Q Consensus 284 ~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~s-p~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~ 349 (421)
....+....... . .....+. +.++.|+ |+++.|++++.|+.+++||+..+ .....+..|...
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~-~~~~~l~~~~~~ 299 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS---LANVRWIGSDGSGILAMCKSGAWLRWNLFAN-NDYNEISDSTMK 299 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSS---CSEEEEETTTTCEEEEECTTSEEEEEEC----------------
T ss_pred cccccCCcccceEEecccccceeeeeccccccc---ceeeeeecCCCCEEEEEeCCCCEEEEECccC-CCCceEeeecCc
Confidence 222211110000 0 0001112 2678876 79999999999999999999876 444555555554
Q ss_pred ccceeeecCCccc-------------ccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEecC
Q 014644 350 NRKPILQAAPRAR-------------RSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACANG 413 (421)
Q Consensus 350 ~~~~~~~~~~~~~-------------~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~ 413 (421)
+..+.+.++.... ..+..++++|+.|+. ++| ..++......+|...|++++|||||++||++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 4444433321000 001236788999999 999 445566667788899999999999999999999
Q ss_pred CceEEEe
Q 014644 414 NSLFFHY 420 (421)
Q Consensus 414 ~~~~i~~ 420 (421)
+++.+|.
T Consensus 380 ~Gv~lvr 386 (393)
T 4gq1_A 380 GSVLLTR 386 (393)
T ss_dssp SEEEEEE
T ss_pred CCeEEEE
Confidence 9998885
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-31 Score=249.14 Aligned_cols=284 Identities=15% Similarity=0.226 Sum_probs=205.2
Q ss_pred CCCccccccccccccEEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCC
Q 014644 21 EPEFDYLKSLEIEEKINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP 99 (421)
Q Consensus 21 ~~~~~~~~~~~h~~~V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 99 (421)
.+++.....+.|.+.|++++| +|+ +.+|++++.||.|++||+.+...... . .
T Consensus 116 ~~~~~~~~~~~h~~~v~~l~~--~p~~~~~lat~~~dg~V~vwd~~~~~~~~~----~-~-------------------- 168 (430)
T 2xyi_A 116 CGKIEIEIKINHEGEVNRARY--MPQNACVIATKTPSSDVLVFDYTKHPSKPE----P-S-------------------- 168 (430)
T ss_dssp --CEEEEEEEEESSCCSEEEE--ETTEEEEEEEECSSSCEEEEEGGGSCSSCC----T-T--------------------
T ss_pred CCceEEEEEEcCCCcEEEEEE--CCCCCcEEEEECCCCcEEEEECCCcccccC----c-c--------------------
Confidence 345666777899999999999 465 78999999999999999976320000 0 0
Q ss_pred CCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCC-EEEEE-cCCcEEEEeCCCCceeeeeee
Q 014644 100 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVD 177 (421)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~~~~~~~~~~~~ 177 (421)
+ ...++..+ .+|...|.+++|+|++. +|++| .||+|++|++.........+.
T Consensus 169 --------~-----------------~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 222 (430)
T 2xyi_A 169 --------G-----------------ECQPDLRL-RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVID 222 (430)
T ss_dssp --------C-----------------CCCCSEEE-ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEE
T ss_pred --------c-----------------cCCCcEEe-cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceec
Confidence 0 01444555 78999999999999988 99999 999999999984222111110
Q ss_pred cCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC
Q 014644 178 MKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN 257 (421)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~ 257 (421)
....+.+|...|.+++|+|++..+|++++.|+.|++||++.+... .....+ ..|...|++++|+|
T Consensus 223 -~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~-~~~~~~-------------~~~~~~v~~i~~~p 287 (430)
T 2xyi_A 223 -AKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS-KPSHTV-------------DAHTAEVNCLSFNP 287 (430)
T ss_dssp -CSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-SCSEEE-------------ECCSSCEEEEEECS
T ss_pred -cceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-cceeEe-------------ecCCCCeEEEEeCC
Confidence 001236799999999999955489999999999999999976311 111222 33578999999999
Q ss_pred CCC-EEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEeeCCCeEEEEecC
Q 014644 258 DGQ-HLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYSNLLRIFSHG 334 (421)
Q Consensus 258 ~~~-~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s~dg~i~iwd~~ 334 (421)
+++ ++++++. +.|++||++..+.++..+..|...+ .+++|+|+++ +|++++.||.|+|||+.
T Consensus 288 ~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v---------------~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 288 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI---------------FQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE---------------EEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE---------------EEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 987 5777765 9999999987567788888887755 8999999985 69999999999999998
Q ss_pred CCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEccCCC-eEEEec-
Q 014644 335 VGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTN-LIACAN- 412 (421)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~spd~~-~la~~~- 412 (421)
.......... ..+.+ ...+....+|...|.+++|+|+++ +|++++
T Consensus 353 ~~~~~~~~~~-----------~~~~~----------------------~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~ 399 (430)
T 2xyi_A 353 KIGEEQSTED-----------AEDGP----------------------PELLFIHGGHTAKISDFSWNPNEPWIICSVSE 399 (430)
T ss_dssp GTTCCCCHHH-----------HHHCC----------------------TTEEEECCCCSSCEEEEEECSSSTTEEEEEET
T ss_pred CCccccCccc-----------cccCC----------------------cceEEEcCCCCCCceEEEECCCCCCEEEEEEC
Confidence 6422110000 00000 012233346678899999999999 788777
Q ss_pred CCceEEEe
Q 014644 413 GNSLFFHY 420 (421)
Q Consensus 413 ~~~~~i~~ 420 (421)
++.|.||+
T Consensus 400 dg~i~iw~ 407 (430)
T 2xyi_A 400 DNIMQVWQ 407 (430)
T ss_dssp TSEEEEEE
T ss_pred CCCEEEeE
Confidence 55699996
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-33 Score=253.72 Aligned_cols=240 Identities=10% Similarity=0.068 Sum_probs=188.1
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCc-eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeE
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISD-QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 212 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v 212 (421)
..+.+.|++++|+|++++|+++ .|+.|++||+.... +... .+.+|...|.+++|+|++ ++|++++.|++|
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-------~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v 79 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-------TFSDHDKIVTCVDWAPKS-NRIVTCSQDRNA 79 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-------CBCCCSSCEEEEEECTTT-CCEEEEETTSSE
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-------EEecCCceEEEEEEeCCC-CEEEEEeCCCeE
Confidence 3466789999999999999999 99999999998332 3443 447899999999999999 999999999999
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCc---ceeEEee-
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDST---PVATFKI- 287 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~---~~~~~~~- 287 (421)
++||+.++.... ....+ ..|...|.+++|+|++++|++++. +.|++||++. ++ ....+..
T Consensus 80 ~vwd~~~~~~~~-~~~~~-------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 80 YVYEKRPDGTWK-QTLVL-------------LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQ-ENDWWVSKHLKRP 144 (377)
T ss_dssp EEC------CCC-CEEEC-------------CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSS
T ss_pred EEEEcCCCCcee-eeeEe-------------cccCCceEEEEECCCCCEEEEEecCCeEEEEEECC-cccceeeeEeecc
Confidence 999998865110 01122 335789999999999999999876 9999999986 44 4566666
Q ss_pred ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC-----------------CceeEEecCCCCc
Q 014644 288 HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS-----------------AGGITVEAGKNEN 350 (421)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~-----------------~~~~~~~~~~~~~ 350 (421)
|...+ .+++|+|++++|++++.||.|++||+.... .....+ +|...+
T Consensus 145 h~~~v---------------~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 208 (377)
T 3dwl_C 145 LRSTI---------------LSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV 208 (377)
T ss_dssp CCSCE---------------EEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred cCCCe---------------EEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence 66544 799999999999999999999999986321 233344 899999
Q ss_pred cceeeecCCcccccccceeeeecccCc-ccC--CCCCc----cccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 351 RKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGH----HELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~----~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
..++|+|+ + .+|++++.|+. ++| ..++. +....+|...|.+++|+|++++|++++++++.+|+
T Consensus 209 ~~~~~sp~--~-----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 209 HAVGFSPS--G-----NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQ 278 (377)
T ss_dssp EEEEECTT--S-----SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEEC
T ss_pred EEEEECCC--C-----CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEE
Confidence 99999998 3 38999999999 999 33444 55667889999999999999999999999988885
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-30 Score=243.04 Aligned_cols=286 Identities=14% Similarity=0.129 Sum_probs=211.3
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccccc
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 114 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 114 (421)
.+.++.+. ++++++|++|+.|+.|++||+.+++..... ..+.. .+.++.++++..+++.++. ++
T Consensus 98 ~~~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~h~~------------~v~~~~~~~~~~~l~s~s~--d~ 161 (420)
T 3vl1_A 98 DYTAVDTA-KLQMRRFILGTTEGDIKVLDSNFNLQREID-QAHVS------------EITKLKFFPSGEALISSSQ--DM 161 (420)
T ss_dssp CEEEEEEE-CSSSCEEEEEETTSCEEEECTTSCEEEEET-TSSSS------------CEEEEEECTTSSEEEEEET--TS
T ss_pred CceEEEEE-ecCCCEEEEEECCCCEEEEeCCCcceeeec-ccccC------------ccEEEEECCCCCEEEEEeC--CC
Confidence 44444332 789999999999999999999987643321 23444 4555666666667776665 56
Q ss_pred ceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc-------
Q 014644 115 ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL------- 186 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~------- 186 (421)
.+++|++.+. ++++.+ .+|...|.+++|+|++++|+++ .|++|++||++ .++....+... ..+
T Consensus 162 ~i~iwd~~~~---~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~~----~~~~~~v~~~ 232 (420)
T 3vl1_A 162 QLKIWSVKDG---SNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG-TGTTIHTFNRK----ENPHDGVNSI 232 (420)
T ss_dssp EEEEEETTTC---CCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT-TTEEEEEECBT----TBTTCCEEEE
T ss_pred eEEEEeCCCC---cCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC-CCceeEEeecC----CCCCCCccEE
Confidence 8999999887 777888 8999999999999999999999 99999999998 55555554211 123
Q ss_pred --------------CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 187 --------------TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 187 --------------~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
...+.+++|+|++ .+|++++.||.|++||+++++... ... ..|...+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~---~~~-------------~~~~~~v~~ 295 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTI---QLP-------------SKFTCSCNS 295 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEE---EEC-------------CTTSSCEEE
T ss_pred EEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeE---Ecc-------------cccCCCcee
Confidence 3445555667888 899999999999999999875431 111 224678999
Q ss_pred EEEcCCCC-EEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEE
Q 014644 253 IKFANDGQ-HLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRI 330 (421)
Q Consensus 253 ~~~s~~~~-~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~i 330 (421)
++|+|+++ +|++++. +.|++||+++...++..+..+.... +..+ +.+++++|++++.||.|++
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------------v~~~-~~~~~~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP--------------INNV-YFAAGALFVSSGFDTSIKL 360 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC--------------EEEE-EEETTEEEEEETTTEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC--------------ceEE-EeCCCCEEEEecCCccEEE
Confidence 99999999 8888876 9999999987445577777744321 1455 5568889999999999999
Q ss_pred EecCCCC--------CceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 331 FSHGVGS--------AGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 331 wd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
|++.... .....+.+|...+..++|+|+.... ..+++.+.++. .+|.
T Consensus 361 w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~----g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 361 DIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESN----GEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSS----CEEEEEETTTEEEEEE
T ss_pred EeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCc----ceEEEEcCCceEEEEe
Confidence 9998742 2244567889999999999983211 13444445555 7773
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.3e-30 Score=245.78 Aligned_cols=274 Identities=12% Similarity=0.192 Sum_probs=208.5
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|.+++| ++++ +|++|+.||+|++||+.+++
T Consensus 160 ~h~~~V~~l~~--~~~~-~l~s~s~dg~i~vwd~~~~~------------------------------------------ 194 (464)
T 3v7d_B 160 GHDGGVWALKY--AHGG-ILVSGSTDRTVRVWDIKKGC------------------------------------------ 194 (464)
T ss_dssp CCSSCEEEEEE--CSTT-EEEEEETTSCEEEEETTTTE------------------------------------------
T ss_pred CCCcCEEEEEE--cCCC-EEEEEeCCCCEEEEECCCCc------------------------------------------
Confidence 69999999999 5665 99999999999999998754
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeec--CCCCEEEEE-cCCcEEEEeCCCCceeeeeeecC--------
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNN--SDCETFVSA-DDLRINLWNLEISDQCFNIVDMK-------- 179 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~-------- 179 (421)
++..+ .+|...|.+++|+ +++++|+++ .|++|++||+.............
T Consensus 195 ------------------~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 255 (464)
T 3v7d_B 195 ------------------CTHVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255 (464)
T ss_dssp ------------------EEEEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESC
T ss_pred ------------------EEEEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeec
Confidence 22334 6899999999998 578899999 99999999998433211100000
Q ss_pred -------CCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 180 -------PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 180 -------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
...+.+|...+.++ ++++ .++++++.|+.|++||+++++.. ..+.. |...|.+
T Consensus 256 ~~~~~~~~~~~~~~~~~v~~~--~~~~-~~l~~~~~d~~i~vwd~~~~~~~----~~~~~-------------~~~~v~~ 315 (464)
T 3v7d_B 256 PEENPYFVGVLRGHMASVRTV--SGHG-NIVVSGSYDNTLIVWDVAQMKCL----YILSG-------------HTDRIYS 315 (464)
T ss_dssp GGGCTTEEEEECCCSSCEEEE--EEET-TEEEEEETTSCEEEEETTTTEEE----EEECC-------------CSSCEEE
T ss_pred cCCCeEEEEEccCccceEEEE--cCCC-CEEEEEeCCCeEEEEECCCCcEE----EEecC-------------CCCCEEE
Confidence 01236788888876 5777 89999999999999999986543 33333 4789999
Q ss_pred EEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEE
Q 014644 253 IKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIF 331 (421)
Q Consensus 253 ~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iw 331 (421)
++|+|+++++++++. +.|++||+++ ++++..+.+|...+ .+++|+ +++|++++.||.|++|
T Consensus 316 ~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v---------------~~~~~~--~~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 316 TIYDHERKRCISASMDTTIRIWDLEN-GELMYTLQGHTALV---------------GLLRLS--DKFLVSAAADGSIRGW 377 (464)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCE---------------EEEEEC--SSEEEEEETTSEEEEE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcE---------------EEEEEc--CCEEEEEeCCCcEEEE
Confidence 999999999999876 9999999987 88899998888765 678886 5799999999999999
Q ss_pred ecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC--CCCCcccc-ccccccCeEEEEEccCCCe
Q 014644 332 SHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHEL-SYNLSSKLLHLAWHPTTNL 407 (421)
Q Consensus 332 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~-~~~~~~~v~~~~~spd~~~ 407 (421)
|+.+.. .. ....+...+..+.++++ ..+|++|+ |+. ++| ..++.+.. ...+...|.+++|+ +..+
T Consensus 378 d~~~~~-~~-~~~~~~~~~~~~~~~~~-------~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l 446 (464)
T 3v7d_B 378 DANDYS-RK-FSYHHTNLSAITTFYVS-------DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTL 446 (464)
T ss_dssp ETTTCC-EE-EEEECTTCCCEEEEEEC-------SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEE
T ss_pred ECCCCc-ee-eeecCCCCccEEEEEeC-------CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEE
Confidence 999763 22 22346667778888888 33888888 777 999 34444443 56778899999998 3344
Q ss_pred EEEecCCceE
Q 014644 408 IACANGNSLF 417 (421)
Q Consensus 408 la~~~~~~~~ 417 (421)
++++++++..
T Consensus 447 ~~~~~~~g~~ 456 (464)
T 3v7d_B 447 VAAVEKDGQS 456 (464)
T ss_dssp EEEEEETTEE
T ss_pred EEEEEeCCeE
Confidence 4455555533
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5e-31 Score=260.87 Aligned_cols=259 Identities=16% Similarity=0.199 Sum_probs=193.7
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|...|++++| ++++++|++|+.|++|+|||+.++...... ..|.. .+.++.++++...+.+++
T Consensus 427 ~~h~~~v~~v~~--s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~-~~h~~------------~v~~~~~s~~~~~l~s~s 491 (694)
T 3dm0_A 427 TGHSHFVEDVVL--SSDGQFALSGSWDGELRLWDLAAGVSTRRF-VGHTK------------DVLSVAFSLDNRQIVSAS 491 (694)
T ss_dssp ECCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSS------------CEEEEEECTTSSCEEEEE
T ss_pred cCCCCcEEEEEE--CCCCCEEEEEeCCCcEEEEECCCCcceeEE-eCCCC------------CEEEEEEeCCCCEEEEEe
Confidence 479999999999 799999999999999999999988733222 23444 345555566666677666
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCC--CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC--ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
. ++.+++|+............. .+|...|.+++|+|++ ..|+++ .|++|++||++ ..++...+ .+|
T Consensus 492 ~--D~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~-~~~~~~~~-------~~h 560 (694)
T 3dm0_A 492 R--DRTIKLWNTLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS-NCKLRSTL-------AGH 560 (694)
T ss_dssp T--TSCEEEECTTSCEEEEECSST-TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TCCEEEEE-------CCC
T ss_pred C--CCEEEEEECCCCcceeeccCC-CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC-CCcEEEEE-------cCC
Confidence 5 678999997554221222222 5799999999999986 578888 99999999998 55555544 789
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
...|.+++|+|++ .+|++++.|+.|++||+++++.. ..+.. ...+.+++|+|++.+++++.
T Consensus 561 ~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~~~----~~~~~--------------~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 561 TGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKL----YSLEA--------------NSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTEEE----ECCBC--------------SSCEEEEEECSSSSEEEEEE
T ss_pred CCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCceE----EEecC--------------CCcEEEEEEcCCCcEEEEEc
Confidence 9999999999999 99999999999999999987643 22222 45799999999999999988
Q ss_pred CCeEEEEECCCCCcceeEEeeccCccccccc----ccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 267 YMNLKLWDIRMDSTPVATFKIHEHLRPKLCD----LYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 267 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
++.|++||+++ +..+..+..+......... ......+..+.+++|+|+|++|++|+.||.|+||++.
T Consensus 622 ~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 622 EHGIKIWDLES-KSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp TTEEEEEETTT-TEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCEEEEECCC-CCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 87899999986 7777666543221100000 0001111224789999999999999999999999986
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-30 Score=241.08 Aligned_cols=251 Identities=14% Similarity=0.166 Sum_probs=191.0
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
..|...|++++| +|++.+|++|+.||.|++||+.+++..... ..+...|.+++|. ...+..++
T Consensus 131 ~~~~~~v~~v~~--s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~--------------~~~l~~~~ 193 (401)
T 4aez_A 131 TDESTYVASVKW--SHDGSFLSVGLGNGLVDIYDVESQTKLRTM-AGHQARVGCLSWN--------------RHVLSSGS 193 (401)
T ss_dssp CCTTCCEEEEEE--CTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEEE--------------TTEEEEEE
T ss_pred cCCCCCEEEEEE--CCCCCEEEEECCCCeEEEEECcCCeEEEEe-cCCCCceEEEEEC--------------CCEEEEEc
Confidence 357899999999 789999999999999999999987733222 2455555555442 22444444
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
. ++.+++|++... ...+..+ .+|...|.+++|+|++++|+++ .|+.|++||++ .......+ ..|..
T Consensus 194 ~--dg~i~i~d~~~~--~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~-~~~~~~~~-------~~~~~ 260 (401)
T 4aez_A 194 R--SGAIHHHDVRIA--NHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR-SSIPKFTK-------TNHNA 260 (401)
T ss_dssp T--TSEEEEEETTSS--SCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-CSSEEEEE-------CCCSS
T ss_pred C--CCCEEEEecccC--cceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC-CCCccEEe-------cCCcc
Confidence 3 568999999843 1556666 7899999999999999999999 99999999998 44444443 67899
Q ss_pred CeeEEEEecCCCCeEEEEE--cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE--
Q 014644 189 VITSAEFHPIYCNLLAYSS--SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS-- 264 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-- 264 (421)
.|.+++|+|++..++++++ .|+.|++||+++++.. ..+.. ...+.+++|+|+++++++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~----~~~~~--------------~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV----NTVDA--------------GSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE----EEEEC--------------SSCEEEEEECSSSSEEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE----EEEeC--------------CCcEEEEEECCCCCeEEEEe
Confidence 9999999998867777765 7999999999987643 33332 568999999999999998
Q ss_pred ecC-CeEEEEECCCCCcceeE--EeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCcee
Q 014644 265 RDY-MNLKLWDIRMDSTPVAT--FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGI 341 (421)
Q Consensus 265 ~~~-~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~ 341 (421)
|.. +.|++||+.+ +..... +.+|...+ .+++|+|++++|++++.||.|++|++.++.....
T Consensus 323 g~~dg~i~v~~~~~-~~~~~~~~~~~h~~~v---------------~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 323 GFPDNNLSIWSYSS-SGLTKQVDIPAHDTRV---------------LYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp CTTTCEEEEEEEET-TEEEEEEEEECCSSCC---------------CEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred ecCCCcEEEEecCC-ccceeEEEecCCCCCE---------------EEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 434 9999999986 544433 55666554 7999999999999999999999999998744433
Q ss_pred EEe
Q 014644 342 TVE 344 (421)
Q Consensus 342 ~~~ 344 (421)
.+.
T Consensus 387 ~~~ 389 (401)
T 4aez_A 387 PIP 389 (401)
T ss_dssp ---
T ss_pred ccc
Confidence 333
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-31 Score=243.67 Aligned_cols=250 Identities=14% Similarity=0.128 Sum_probs=195.8
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC-ceeeeeeecCCCCCCccCCCeeEEEEecC--CCCeE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS-DQCFNIVDMKPSNMDDLTEVITSAEFHPI--YCNLL 203 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l 203 (421)
+++..+ .+|.+.|++++|+|++++|+++ .|+.|++||+... .+.... +.+|...|.+++|+|+ + .+|
T Consensus 2 ~~~~~~-~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~-~~l 72 (379)
T 3jrp_A 2 SMVVIA-NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT-------LTGHEGPVWRVDWAHPKFG-TIL 72 (379)
T ss_dssp ---CCE-EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE-------ECCCSSCEEEEEECCGGGC-SEE
T ss_pred CccEEe-cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeE-------ecCCCCcEEEEEeCCCCCC-CEE
Confidence 445566 8999999999999999999999 9999999999732 223333 3789999999999977 7 999
Q ss_pred EEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC--CCEEEEecC-CeEEEEECCCCC-
Q 014644 204 AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND--GQHLLSRDY-MNLKLWDIRMDS- 279 (421)
Q Consensus 204 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~-~~i~i~d~~~~~- 279 (421)
++++.||.|++||+.+++.. ....+ ..|...|.+++|+|+ +.+|++++. +.|++||++...
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~--~~~~~-------------~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWS--QIAVH-------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEETTSCEEEEEEETTEEE--EEEEE-------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EEeccCCEEEEEEcCCCcee--Eeeee-------------cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 99999999999999886421 01222 234789999999999 999999876 999999998632
Q ss_pred cceeEEeeccCcccccccccCCCcceeeeEEEEcC-------------CCCEEEEeeCCCeEEEEecCCCCC---ceeEE
Q 014644 280 TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-------------DGLHFATGSYSNLLRIFSHGVGSA---GGITV 343 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-------------~~~~l~~~s~dg~i~iwd~~~~~~---~~~~~ 343 (421)
.....+..|...+ .+++|+| ++.+|++++.||.|++||++++.. ....+
T Consensus 138 ~~~~~~~~~~~~v---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 202 (379)
T 3jrp_A 138 TSPIIIDAHAIGV---------------NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL 202 (379)
T ss_dssp CCEEEEECCTTCE---------------EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred eeeEEecCCCCce---------------EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE
Confidence 2334455666544 7999999 699999999999999999987643 34577
Q ss_pred ecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCCC-------ccccccccccCeEEEEEccCCCeEEEec-CC
Q 014644 344 EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG-------HHELSYNLSSKLLHLAWHPTTNLIACAN-GN 414 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~-------~~~~~~~~~~~v~~~~~spd~~~la~~~-~~ 414 (421)
.+|..++..++|+|+... ...|++++.|+. ++|+... .......+...|++++|+|++++|++++ ++
T Consensus 203 ~~h~~~v~~~~~sp~~~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 278 (379)
T 3jrp_A 203 EGHSDWVRDVAWSPTVLL----RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 278 (379)
T ss_dssp CCCSSCEEEEEECCCCSS----SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS
T ss_pred ecccCcEeEEEECCCCCC----CCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC
Confidence 889999999999987210 138999999999 9993221 2223334788999999999999999887 56
Q ss_pred ceEEEe
Q 014644 415 SLFFHY 420 (421)
Q Consensus 415 ~~~i~~ 420 (421)
.+++|+
T Consensus 279 ~i~iw~ 284 (379)
T 3jrp_A 279 KVTLWK 284 (379)
T ss_dssp SEEEEE
T ss_pred cEEEEe
Confidence 699997
No 86
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.2e-32 Score=245.09 Aligned_cols=255 Identities=9% Similarity=0.053 Sum_probs=189.2
Q ss_pred cccccEEEEEEEEcCCCCeEEEE-----------eCCCcEEEeecCCce--eEEeeecCCCCCcccccccccccceeecc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILS-----------TNDKTIKLWKVRDQK--VKKIKEMDHFPFVSSENTLLAEKNFMNEH 97 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~-----------s~d~~v~lwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 97 (421)
+|++.|.++.+ + ++.+++| +.|+++|+|++.... +......... .....+..+.+++
T Consensus 71 ~~~~~v~s~~~--~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~v~ 140 (365)
T 4h5i_A 71 DNDDSPTAIDA--S--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFD------ASTNADDYTKLVY 140 (365)
T ss_dssp TTSCCCCEEEE--E--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSS------CCCCTTCCEEEEE
T ss_pred CCCCceEEEEe--C--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeecee------ecCCcccCEEEEE
Confidence 56778888877 2 4455554 457789999876543 2222221111 1111234566778
Q ss_pred CCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeee
Q 014644 98 NPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVD 177 (421)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~ 177 (421)
++|++.+++.++...++.+++|+..+. +++..+ .|...|.+++|+|||++|+++.++.+++|+..++......
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~---~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~-- 213 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDL---TEKFEI--ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARK-- 213 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTT---EEEEEE--ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEE--
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCC---cEEEEe--CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeee--
Confidence 888888877665555779999999987 777776 4778899999999999999995556667776634433322
Q ss_pred cCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC----eEEEEECCcccccccchhhhccccccCCCcccccccccceeEE
Q 014644 178 MKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG----FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI 253 (421)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~----~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~ 253 (421)
....|...|.+++|+|++ ..+++++.|+ .+++||+............ +.+|...|+++
T Consensus 214 ----~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~V~~~ 275 (365)
T 4h5i_A 214 ----TDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ-------------VTNRFKGITSM 275 (365)
T ss_dssp ----CCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE-------------EESSCSCEEEE
T ss_pred ----ecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeee-------------ecCCCCCeEeE
Confidence 236788899999999999 9999999887 6888988765422111122 23457889999
Q ss_pred EEcCCCCEEEEecC-CeEEEEECCCCCcceeEE-eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEE
Q 014644 254 KFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF-KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIF 331 (421)
Q Consensus 254 ~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iw 331 (421)
+|+|||++||+|+. ++|+|||+++ ++++..+ .+|...+ ++++|+|||++|++||.|++|+||
T Consensus 276 ~~Spdg~~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V---------------~~v~fSpdg~~laS~S~D~tvrvw 339 (365)
T 4h5i_A 276 DVDMKGELAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAI---------------TEVTISPDSTYVASVSAANTIHII 339 (365)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTT-TEEEEEETTSSSSCE---------------EEEEECTTSCEEEEEETTSEEEEE
T ss_pred EECCCCCceEEEcCCCEEEEEECCC-CcEEEEecCcccCCE---------------EEEEECCCCCEEEEEeCCCeEEEE
Confidence 99999999999976 9999999987 8887775 6788765 899999999999999999999999
Q ss_pred ecCCC
Q 014644 332 SHGVG 336 (421)
Q Consensus 332 d~~~~ 336 (421)
|+...
T Consensus 340 ~ip~~ 344 (365)
T 4h5i_A 340 KLPLN 344 (365)
T ss_dssp ECCTT
T ss_pred EcCCC
Confidence 99754
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.9e-31 Score=265.28 Aligned_cols=275 Identities=14% Similarity=0.078 Sum_probs=229.2
Q ss_pred cceeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC
Q 014644 91 KNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS 169 (421)
Q Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~ 169 (421)
..+.++++++++.+++.++. ++.+++|+..++ +.++.+ .+|...|.+++|+|++++|+++ .|+.|++||+. .
T Consensus 14 ~~v~~i~~sp~~~~la~~~~--~g~v~iwd~~~~---~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~-~ 86 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLY--SGRVEIWNYETQ---VEVRSI-QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN-T 86 (814)
T ss_dssp SCEEEEEECSSSSEEEEEET--TSEEEEEETTTT---EEEEEE-ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-T
T ss_pred CceEEEEECCCCCEEEEEeC--CCEEEEEECCCC---ceEEEE-ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-C
Confidence 45677777788888888765 678999999887 788888 7999999999999999999999 99999999998 4
Q ss_pred ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccc
Q 014644 170 DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 249 (421)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 249 (421)
++....+ .+|...|.+++|+|++ ..|++++.||.|++||+.++... ...+. .|...
T Consensus 87 ~~~~~~~-------~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~---~~~~~-------------~~~~~ 142 (814)
T 3mkq_A 87 GEKVVDF-------EAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWAL---EQTFE-------------GHEHF 142 (814)
T ss_dssp CCEEEEE-------ECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEE---EEEEE-------------CCSSC
T ss_pred CcEEEEE-------ecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceE---EEEEc-------------CCCCc
Confidence 5555444 6799999999999999 89999999999999999875322 12333 34788
Q ss_pred eeEEEEcC-CCCEEEEecC-CeEEEEECCCCCcceeEEeecc-CcccccccccCCCcceeeeEEEEcC--CCCEEEEeeC
Q 014644 250 ISDIKFAN-DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHE-HLRPKLCDLYNNDSIFDKFECSVSG--DGLHFATGSY 324 (421)
Q Consensus 250 v~~~~~s~-~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp--~~~~l~~~s~ 324 (421)
|.+++|+| ++..+++++. +.|++||++. +.....+..+. ..+ ..++|+| ++.+|++++.
T Consensus 143 v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v---------------~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGV---------------NYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCC---------------CEEEECCSTTCCEEEEECT
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCE---------------EEEEEEECCCCCEEEEEeC
Confidence 99999999 8889998876 9999999986 66666665543 332 6899999 9999999999
Q ss_pred CCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CCCccccccccccCeEEEEE
Q 014644 325 SNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SSGHHELSYNLSSKLLHLAW 401 (421)
Q Consensus 325 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~~~~~~~~~~~~~v~~~~~ 401 (421)
||.|++||+.++ .....+.+|...+..++|+|+ +..|++++.||. ++|+ .+........+...|.+++|
T Consensus 207 dg~i~~~d~~~~-~~~~~~~~~~~~v~~~~~~~~-------~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~ 278 (814)
T 3mkq_A 207 DLTIKIWDYQTK-SCVATLEGHMSNVSFAVFHPT-------LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT 278 (814)
T ss_dssp TSEEEEEETTTT-EEEEEEECCSSCEEEEEECSS-------SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEE
T ss_pred CCEEEEEECCCC-cEEEEEcCCCCCEEEEEEcCC-------CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEE
Confidence 999999999887 667888999999999999998 348999999999 9993 34555556677889999999
Q ss_pred ccCCC--eEEEecCCceEEEe
Q 014644 402 HPTTN--LIACANGNSLFFHY 420 (421)
Q Consensus 402 spd~~--~la~~~~~~~~i~~ 420 (421)
+|++. ++++++++++.+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 279 HPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp CTTCGGGEEEEEETTEEEEEE
T ss_pred ccCCCceEEEEEeCCCEEEEE
Confidence 99997 58888899988886
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.1e-31 Score=239.34 Aligned_cols=260 Identities=14% Similarity=0.187 Sum_probs=198.5
Q ss_pred cccccEEEEEEEEcCC--CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 31 EIEEKINRVRWCAAPN--GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~--~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.|...|++++|++... +.+|++|+.||.|++||+.+++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~---------------------------------------- 106 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ---------------------------------------- 106 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC----------------------------------------
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce----------------------------------------
Confidence 3678899999965433 6799999999999999998753
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
++..+ .+|...|.+++|+| ++++|+++ .|++|++||++ .++....+ ..+.+|
T Consensus 107 --------------------~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~----~~~~~~ 160 (366)
T 3k26_A 107 --------------------CIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ-TDTLVAIF----GGVEGH 160 (366)
T ss_dssp --------------------EEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT-TTEEEEEE----CSTTSC
T ss_pred --------------------Eeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee-cCeEEEEe----cccccc
Confidence 22334 67999999999999 99999999 99999999998 45555443 123679
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhcccccc-----------CCCcccccccccceeEEEE
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAES-----------HGSKSFFTEIIASISDIKF 255 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~-----------~~~~~~~~~~~~~v~~~~~ 255 (421)
...|.+++|+|++ .+|++++.|+.|++||+++++............... .........|...|.+++|
T Consensus 161 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 161 RDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred cCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 9999999999999 999999999999999999875431111000000000 0001112347889999999
Q ss_pred cCCCCEEEEecC-CeEEEEECCCCCc-------------ceeEEeeccCcccccccccCCCcceeeeEEEEcCC--CCEE
Q 014644 256 ANDGQHLLSRDY-MNLKLWDIRMDST-------------PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD--GLHF 319 (421)
Q Consensus 256 s~~~~~l~~~~~-~~i~i~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--~~~l 319 (421)
+ ++++++++. +.|++||+++... .+..+..|...+ .+++|+|+ +++|
T Consensus 240 ~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~~~l 302 (366)
T 3k26_A 240 L--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDI---------------WYMRFSMDFWQKML 302 (366)
T ss_dssp E--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCS---------------SCCCCEECTTSSEE
T ss_pred c--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcE---------------EEEEEcCCCCCcEE
Confidence 9 778888876 9999999976222 255555565544 68899999 9999
Q ss_pred EEeeCCCeEEEEecCCCCC---ceeEEecC--CCCccceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 320 ATGSYSNLLRIFSHGVGSA---GGITVEAG--KNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 320 ~~~s~dg~i~iwd~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
++|+.||.|++||+.++.. ....+.+| ...+..++|+|+ + .+|++++.|+. ++|+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~-----~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD--S-----SILIAVCDDASIWRWD 363 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT--S-----SEEEEEETTSEEEEEE
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC--C-----CeEEEEeCCCEEEEEE
Confidence 9999999999999998743 23467777 799999999998 3 48999999999 9994
No 89
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-32 Score=268.04 Aligned_cols=254 Identities=15% Similarity=0.102 Sum_probs=191.9
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeec-CCCCCcccccccccccceeeccCCCC--ceeee
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHNPPS--FAHGY 106 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~ 106 (421)
.+|.+.|++++| +|++++|++|+.||+|+|||+.++........ .|..+|.++ .++++ +.+++
T Consensus 6 ~gH~~~V~~l~~--s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l------------~~s~~~~~~~l~ 71 (753)
T 3jro_A 6 NAHNELIHDAVL--DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRV------------DWAHPKFGTILA 71 (753)
T ss_dssp --CCCCEEEECC--CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEE------------EECCTTSCSEEE
T ss_pred ccCcceeEEEEE--CCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEE------------EecCCCCCCEEE
Confidence 479999999999 78999999999999999999985543333332 344544444 44444 55666
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCC
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
.++. ++.+++|++.... ......+ .+|...|.+++|+|+ ++.+++| .||+|++||++........ .+
T Consensus 72 s~s~--Dg~I~vwd~~~~~-~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~------~~ 141 (753)
T 3jro_A 72 SCSY--DGKVLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI------II 141 (753)
T ss_dssp EEET--TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE------EE
T ss_pred EEeC--CCeEEEEECCCCc-ccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee------Ee
Confidence 6655 6789999998761 1256666 789999999999999 9999999 9999999999844222111 23
Q ss_pred CccCCCeeEEEEec-------------CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccce
Q 014644 184 DDLTEVITSAEFHP-------------IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 184 ~~~~~~v~~~~~~p-------------~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v 250 (421)
.+|...|.+++|+| ++ ..|++++.||.|++||++.+.........+ ..|...|
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-------------~~h~~~V 207 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTL-------------EGHSDWV 207 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGG-CCEEEEETTSCEEEEEEETTTTEEEEEEEE-------------CCCSSCE
T ss_pred ecCCCceEEEEecCcccccccccccCCCC-CEEEEEECCCeEEEEeccCCcccceeeeee-------------cCCCCcE
Confidence 67889999999999 46 899999999999999998764321212222 3458899
Q ss_pred eEEEEcCC---CCEEEEecC-CeEEEEECCCCCc----ceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe
Q 014644 251 SDIKFAND---GQHLLSRDY-MNLKLWDIRMDST----PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 322 (421)
Q Consensus 251 ~~~~~s~~---~~~l~~~~~-~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~ 322 (421)
.+++|+|+ ++++++++. |.|++||+++... .......+...+ .+++|+|+|++|++|
T Consensus 208 ~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v---------------~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 208 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVL---------------WRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCC---------------CCEEECTTTCCEEEE
T ss_pred EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCce---------------EEEEEcCCCCEEEEE
Confidence 99999999 899999876 9999999986221 111122233332 789999999999999
Q ss_pred eCCCeEEEEecCCC
Q 014644 323 SYSNLLRIFSHGVG 336 (421)
Q Consensus 323 s~dg~i~iwd~~~~ 336 (421)
+.||.|++|++.++
T Consensus 273 s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 273 GGDNKVTLWKENLE 286 (753)
T ss_dssp CSSSCEECCBCCSS
T ss_pred cCCCEEEEEecCCC
Confidence 99999999999865
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.3e-30 Score=231.28 Aligned_cols=253 Identities=16% Similarity=0.153 Sum_probs=189.3
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|...|++++| +|++++|++++.|+.|++|+............ ... .+......+....++.++
T Consensus 83 ~~h~~~V~~~~~--s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~-~~~------------~~~~~~~~~~~~~l~s~s 147 (340)
T 4aow_A 83 RGHSHFVSDVVI--SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVG-HTK------------DVLSVAFSSDNRQIVSGS 147 (340)
T ss_dssp CCCSSCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSS------------CEEEEEECTTSSCEEEEE
T ss_pred eCCCCCEEEEEE--CCCCCEEEEEcccccceEEeecccceeeeecC-CCC------------ceeEEEEeecCccceeec
Confidence 368999999999 79999999999999999999988764333222 222 233344445555666655
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCC--CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC--ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~--~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
. ++.+++|+.... ........+|...+..++|++++ .+++++ .|++|++||++ ..+....+ .+|
T Consensus 148 ~--d~~~~~~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~-~~~~~~~~-------~~h 214 (340)
T 4aow_A 148 R--DKTIKLWNTLGV---CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKTNH-------IGH 214 (340)
T ss_dssp T--TSCEEEECTTSC---EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT-TTEEEEEE-------CCC
T ss_pred C--CCeEEEEEeCCC---ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC-CCceeeEe-------cCC
Confidence 4 567899987664 33333337899999999998764 567787 99999999998 55555544 789
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
...|.+++|+|++ ++|++++.|+.|++||+++.+.. ..+.. ...+..+.|+|++.+++++.
T Consensus 215 ~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~~~----~~~~~--------------~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 215 TGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGKHL----YTLDG--------------GDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp SSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEE----EEEEC--------------SSCEEEEEECSSSSEEEEEE
T ss_pred CCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCcee----eeecC--------------CceEEeeecCCCCceeeccC
Confidence 9999999999999 99999999999999999986543 33333 46799999999998888887
Q ss_pred CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 267 YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 267 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
++.|++||++. +..+..+..+..... ...+.. .|++++|+|+|++|++|+.||.|+|||+.+|
T Consensus 276 d~~i~iwd~~~-~~~~~~~~~~~~~~~---~~~h~~---~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 276 GPSIKIWDLEG-KIIVDELKQEVISTS---SKAEPP---QCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp TTEEEEEETTT-TEEEEEECCC----------CCCC---CEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCEEEEEECCC-CeEEEeccccceeee---ccCCCC---CEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 89999999985 655555443211100 000111 2379999999999999999999999999987
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.3e-30 Score=239.71 Aligned_cols=255 Identities=16% Similarity=0.208 Sum_probs=199.1
Q ss_pred ccceeEEeecccceeeeeeeec-CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCe
Q 014644 113 NMATKIANVGNSVHARCQKVYP-HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI 190 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v 190 (421)
+..+++|+..++ ++.+.+. .+|...|++++|+|+|++|++| .|++|++||++ .++.+..+ .+|...+
T Consensus 124 d~tV~lWd~~tg---~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~-~~~~~~~~-------~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSG---DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ-QQKRLRNM-------TSHSARV 192 (420)
T ss_dssp TTEEEEEETTTC---CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-TTEEEEEE-------CCCSSCE
T ss_pred CCEEEEEECCCC---CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC-CCcEEEEE-------eCCCCce
Confidence 568999999987 6555441 4788899999999999999999 99999999998 56666554 7899999
Q ss_pred eEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-Ce
Q 014644 191 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 269 (421)
Q Consensus 191 ~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 269 (421)
.+++++ + ..|++++.|+.+++||.+..... ...+ .+|...+..+.++|+++++++++. +.
T Consensus 193 ~~~s~~--~-~~l~sgs~d~~i~~~d~~~~~~~---~~~~-------------~~h~~~~~~~~~~~~g~~l~s~~~D~~ 253 (420)
T 4gga_A 193 GSLSWN--S-YILSSGSRSGHIHHHDVRVAEHH---VATL-------------SGHSQEVCGLRWAPDGRHLASGGNDNL 253 (420)
T ss_dssp EEEEEE--T-TEEEEEETTSEEEEEETTSSSCE---EEEE-------------ECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeC--C-CEEEEEeCCCceeEeeeccccee---eEEe-------------cccccceeeeeecCCCCeeeeeecccc
Confidence 988776 4 78999999999999998875422 1223 345789999999999999999865 99
Q ss_pred EEEEECCCCC---cceeEEeeccCcccccccccCCCcceeeeEEEEcCCC-CEEEE--eeCCCeEEEEecCCCCCceeEE
Q 014644 270 LKLWDIRMDS---TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG-LHFAT--GSYSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 270 i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~--~s~dg~i~iwd~~~~~~~~~~~ 343 (421)
+++|+..... ..+.....|...+ .+++|+|++ ..+++ |+.|+.|++||+.++ .....+
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V---------------~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~-~~~~~~ 317 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAV---------------KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-ACLSAV 317 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCE---------------EEEEECTTCTTEEEEEECTTTCEEEEEETTTT-EEEEEE
T ss_pred ceEEeeccccccceeeeeecccCCce---------------eeeeeCCCcccEEEEEeecCCCEEEEEeCCcc-ccceee
Confidence 9999997522 2344455555543 789999964 45554 457999999999987 555555
Q ss_pred ecCCCCccceeeecCCcccccccceee--eecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEec-CCceE
Q 014644 344 EAGKNENRKPILQAAPRARRSSLSNLT--RGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLF 417 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~--~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~ 417 (421)
..| ..+..+.|.++ +. .++ +|+.|+. ++| ..++.+..+.+|...|++++|+|||++||+|+ ++.|+
T Consensus 318 ~~~-~~v~~~~~~~~--~~-----~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 318 DAH-SQVCSILWSPH--YK-----ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp ECS-SCEEEEEEETT--TT-----EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred ccc-cceeeeeecCC--CC-----eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 544 56778888887 32 444 4557888 999 45567777889999999999999999999998 55699
Q ss_pred EEeC
Q 014644 418 FHYA 421 (421)
Q Consensus 418 i~~~ 421 (421)
||+.
T Consensus 390 iWdv 393 (420)
T 4gga_A 390 LWRC 393 (420)
T ss_dssp EECC
T ss_pred EEEC
Confidence 9974
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=7.5e-31 Score=238.41 Aligned_cols=251 Identities=14% Similarity=0.179 Sum_probs=196.4
Q ss_pred ccccccccccccEEEEEEEEcCC---CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCC
Q 014644 24 FDYLKSLEIEEKINRVRWCAAPN---GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP 100 (421)
Q Consensus 24 ~~~~~~~~h~~~V~~v~~~~~~~---~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 100 (421)
...+...+|...|++++| +|+ +.+|++++.|+.|++||+.+++
T Consensus 56 ~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------------------------------- 101 (357)
T 3i2n_A 56 LKLLREIEKAKPIKCGTF--GATSLQQRYLATGDFGGNLHIWNLEAPE-------------------------------- 101 (357)
T ss_dssp EEEEEEEEESSCEEEEEC--TTCCTTTCCEEEEETTSCEEEECTTSCS--------------------------------
T ss_pred ccceeeecccCcEEEEEE--cCCCCCCceEEEecCCCeEEEEeCCCCC--------------------------------
Confidence 334445689999999999 676 6999999999999999998753
Q ss_pred CceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEE------eecCCCCEEEEE-cCCcEEEEeCCCCceee
Q 014644 101 SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSI------SNNSDCETFVSA-DDLRINLWNLEISDQCF 173 (421)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l------~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~ 173 (421)
.++..+ .+|...|.++ +|+|++++|+++ .|+.|++||++......
T Consensus 102 ---------------------------~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~ 153 (357)
T 3i2n_A 102 ---------------------------MPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV 153 (357)
T ss_dssp ---------------------------SCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS
T ss_pred ---------------------------ccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc
Confidence 123344 6888999999 567899999999 99999999998544345
Q ss_pred eeeecCCCCCCc-cCCCeeEEE----EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccccc
Q 014644 174 NIVDMKPSNMDD-LTEVITSAE----FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 248 (421)
Q Consensus 174 ~~~~~~~~~~~~-~~~~v~~~~----~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 248 (421)
..+.. ..+ +...+.+++ |+|++ .+|++++.|+.|++||+++++.. . . ..|..
T Consensus 154 ~~~~~----~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~----~-~-------------~~~~~ 210 (357)
T 3i2n_A 154 ANMEP----VQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALR----W-E-------------TNIKN 210 (357)
T ss_dssp EEECC----CTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEE----E-E-------------EECSS
T ss_pred eeccc----cCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCcee----e-e-------------cCCCC
Confidence 44411 111 234788888 67888 99999999999999999987532 1 1 22367
Q ss_pred ceeEEEEcC---CCCEEEEecC-CeEEEEECCCCCcceeEEe-----eccCcccccccccCCCcceeeeEEEEcCCCC-E
Q 014644 249 SISDIKFAN---DGQHLLSRDY-MNLKLWDIRMDSTPVATFK-----IHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-H 318 (421)
Q Consensus 249 ~v~~~~~s~---~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~ 318 (421)
.+.+++|+| ++.++++++. +.|++||+++ ++....+. +|...+ .+++|+|+++ +
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v---------------~~~~~~~~~~~~ 274 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTV---------------WQVRHLPQNREL 274 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCE---------------EEEEEETTEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCE---------------EEEEECCCCCcE
Confidence 899999999 8999999876 9999999986 55554444 666544 7999999998 8
Q ss_pred EEEeeCCCeEEEEecCCCCC------------------ceeEEecCCCCccceeeecCCcccccccceee-eecccCc-c
Q 014644 319 FATGSYSNLLRIFSHGVGSA------------------GGITVEAGKNENRKPILQAAPRARRSSLSNLT-RGLYRQA-H 378 (421)
Q Consensus 319 l~~~s~dg~i~iwd~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~g~~d~~-~ 378 (421)
|++++.||.|++||++.+.. ....+.+|..++..++|+|+ +. .|+ +++.|+. +
T Consensus 275 l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~-----~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 275 FLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD--KR-----GLCVCSSFDQTVR 347 (357)
T ss_dssp EEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS--ST-----TEEEEEETTSEEE
T ss_pred EEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCC--CC-----eEEEEecCCCcEE
Confidence 99999999999999986532 35678899999999999998 33 677 8999999 9
Q ss_pred cCCC
Q 014644 379 ENSS 382 (421)
Q Consensus 379 iw~~ 382 (421)
+|+.
T Consensus 348 iw~~ 351 (357)
T 3i2n_A 348 VLIV 351 (357)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9943
No 93
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=6.9e-31 Score=248.74 Aligned_cols=291 Identities=8% Similarity=-0.023 Sum_probs=203.6
Q ss_pred CCCCcccccccccc-c-------ceeeccCC--------CCceeeeecccccccceeEEeecccce-eeeeeeecCCCCc
Q 014644 77 HFPFVSSENTLLAE-K-------NFMNEHNP--------PSFAHGYHLEWTENMATKIANVGNSVH-ARCQKVYPHAHDF 139 (421)
Q Consensus 77 ~~~~v~~~~~~~~~-~-------~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~ 139 (421)
..+.|.+++|.+.. + .+++++.. ++...+++++. ++.+++|++..... ......+ .+|.+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~--D~tI~iWd~~~~~~~~~~~~~l-~~~~~ 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKH--SSCIQIFKMNTSTLHCVKVQTI-VHSFG 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------CEEEEEEEEETTTCCEEEEEEE-EECCC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCC--CceEEEEEccCCCCCceEEEEE-EecCC
Confidence 57788999998864 1 34444332 22333444433 56899999876521 1112344 57888
Q ss_pred ceEEEeecCC------CCEEEEE-cCCcEEEEeCCCCcee---eeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC
Q 014644 140 NINSISNNSD------CETFVSA-DDLRINLWNLEISDQC---FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR 209 (421)
Q Consensus 140 ~v~~l~~~~~------~~~l~s~-~d~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 209 (421)
.|.+++|+|+ +.+||++ .|++|++||+...... ..........+.+|...|.+++|+|+ ..|++|+.|
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--TTVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--SEEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--CeEEEEeCC
Confidence 9999999996 5799998 9999999999733211 00000000134779999999999986 479999999
Q ss_pred CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEE--EEcCCC-CEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 210 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI--KFANDG-QHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 210 ~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
|+|++||++++... ...+ ..|...|.++ +|+|+| .+|++++. ++|+|||+++ ++....+
T Consensus 287 gtV~lWD~~~~~~~---~~~~-------------~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~ 349 (524)
T 2j04_B 287 GFVAEFDLTDPEVP---SFYD-------------QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTT 349 (524)
T ss_dssp SEEEEEETTBCSSC---SEEE-------------ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEE
T ss_pred CEEEEEECCCCCCc---eEEe-------------ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccc
Confidence 99999999875321 1223 3458899999 678888 88999876 9999999986 6766667
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccc
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSS 365 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (421)
.+|.... .+.+++|+|+++.+++++.|++|++||++++ .....+.+|.+.|.+++|+|+ +
T Consensus 350 ~~~~~~~-------------~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~-~~~~~l~gH~~~V~sva~Sp~--g---- 409 (524)
T 2j04_B 350 VSRFRGS-------------NLVPVVYCPQIYSYIYSDGASSLRAVPSRAA-FAVHPLVSRETTITAIGVSRL--H---- 409 (524)
T ss_dssp EEECSCC-------------SCCCEEEETTTTEEEEECSSSEEEEEETTCT-TCCEEEEECSSCEEEEECCSS--C----
T ss_pred ccccccC-------------cccceEeCCCcCeEEEeCCCCcEEEEECccc-ccceeeecCCCceEEEEeCCC--C----
Confidence 6665311 0158999999999999999999999999987 556778899999999999998 3
Q ss_pred cceeeeecccCc-ccCCCCCccccc-cc-----cccCeEEEEEccCCCeEEE
Q 014644 366 LSNLTRGLYRQA-HENSSSGHHELS-YN-----LSSKLLHLAWHPTTNLIAC 410 (421)
Q Consensus 366 ~~~l~~g~~d~~-~iw~~~~~~~~~-~~-----~~~~v~~~~~spd~~~la~ 410 (421)
..|++|+.|+. ++|+........ .. ....|..++|+|++..+..
T Consensus 410 -~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~ 460 (524)
T 2j04_B 410 -PMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI 460 (524)
T ss_dssp -CBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE
T ss_pred -CeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc
Confidence 38999999999 999544332221 11 1124789999999986643
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=9.6e-31 Score=239.16 Aligned_cols=239 Identities=10% Similarity=0.028 Sum_probs=195.9
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCce--eeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCe
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQ--CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGF 211 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~ 211 (421)
..|.+.|.+++|+|++++|+++ .|+.|++||+. .++ ....+ .+|...|.+++|+|++ .+|++++.|+.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~-~~~~~~~~~~-------~~h~~~v~~~~~~~~~-~~l~~~~~dg~ 75 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS-GNKWVQVHEL-------KEHNGQVTGVDWAPDS-NRIVTCGTDRN 75 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEE-TTEEEEEEEE-------ECCSSCEEEEEEETTT-TEEEEEETTSC
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCcEEeeeee-------cCCCCcccEEEEeCCC-CEEEEEcCCCe
Confidence 5689999999999999999999 99999999998 443 44433 6799999999999999 99999999999
Q ss_pred EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcc---eeEE-e
Q 014644 212 VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTP---VATF-K 286 (421)
Q Consensus 212 v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~---~~~~-~ 286 (421)
|++||+.+++.. .... +..|...+.+++|+|++++|++++. +.|++||++. +.. ...+ .
T Consensus 76 i~vwd~~~~~~~----~~~~-----------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~-~~~~~~~~~~~~ 139 (372)
T 1k8k_C 76 AYVWTLKGRTWK----PTLV-----------ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ-ENDWWVCKHIKK 139 (372)
T ss_dssp EEEEEEETTEEE----EEEE-----------CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET-TTTEEEEEEECT
T ss_pred EEEEECCCCeee----eeEE-----------eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC-CCcceeeeeeec
Confidence 999999776422 1111 1224778999999999999999876 9999999986 442 2222 2
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC-----------------CCCceeEEecCCCC
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV-----------------GSAGGITVEAGKNE 349 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~-----------------~~~~~~~~~~~~~~ 349 (421)
.|...+ .+++|+|++++|++++.||.|++||+.. .......+.+|...
T Consensus 140 ~~~~~i---------------~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 140 PIRSTV---------------LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp TCCSCE---------------EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred ccCCCe---------------eEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 334332 7999999999999999999999999641 22567778899999
Q ss_pred ccceeeecCCcccccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 350 NRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
+..+.|+|+ ...|++++.|+. ++| ..++.+.....+...|.+++|+|++++|+++.++.+++|+
T Consensus 205 v~~~~~~~~-------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~ 271 (372)
T 1k8k_C 205 VHGVCFSAN-------GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFT 271 (372)
T ss_dssp EEEEEECSS-------SSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEE
T ss_pred EEEEEECCC-------CCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEE
Confidence 999999998 338999999999 999 3455566666788899999999999999999889999997
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.8e-31 Score=236.91 Aligned_cols=234 Identities=16% Similarity=0.176 Sum_probs=169.4
Q ss_pred CCCCeEEEEeCCCcEEEeecCCcee-EEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecc
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKV-KKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 123 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 123 (421)
.++.+|++|+.||+|++||+.+++. ..+. ...|.++ .+.+. +.+++. ++.+++|+...
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~------------~~~~~---~~s~s~--D~~i~~w~~~~ 104 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTG------------GEHPA---IISRGP--CNRLLLLYPGN 104 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTT------------CCCCS---EEEECS--TTEEEEEETTT
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceee------------eeCCc---eEEecC--CCeEEEEEccC
Confidence 5678999999999999999998873 3332 2223333 33333 333333 45677776553
Q ss_pred cc------eeeeeeeecCCCCcceEEEeecC--CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEE
Q 014644 124 SV------HARCQKVYPHAHDFNINSISNNS--DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 124 ~~------~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
.. ..+.++.+..+|.+.|.+++|+| ++++|+++ .|++|++||++ .++...... ..+...+.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~-~~~~~~~~~------~~~~~~i~~~~ 177 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE-DDSQYIVHS------AKSDVEYSSGV 177 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS-SSCEEEEEC------CCSSCCCCEEE
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC-CCcEEEEEe------cCCCCceEEEE
Confidence 21 12445555457888999999999 99999998 99999999998 455544331 33556799999
Q ss_pred EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEE
Q 014644 195 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWD 274 (421)
Q Consensus 195 ~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d 274 (421)
|+|++ .+|++|+.||.|++||++++.... ..+.. .|...|.+++|+|+|.+|++++++.|++||
T Consensus 178 ~~pdg-~~lasg~~dg~i~iwd~~~~~~~~---~~~~~------------~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd 241 (343)
T 3lrv_A 178 LHKDS-LLLALYSPDGILDVYNLSSPDQAS---SRFPV------------DEEAKIKEVKFADNGYWMVVECDQTVVCFD 241 (343)
T ss_dssp ECTTS-CEEEEECTTSCEEEEESSCTTSCC---EECCC------------CTTSCEEEEEECTTSSEEEEEESSBEEEEE
T ss_pred ECCCC-CEEEEEcCCCEEEEEECCCCCCCc---cEEec------------cCCCCEEEEEEeCCCCEEEEEeCCeEEEEE
Confidence 99999 999999999999999999875320 12222 147899999999999999998888999999
Q ss_pred CCCCCcceeEEee---ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC-CCeEEEEecCCC
Q 014644 275 IRMDSTPVATFKI---HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY-SNLLRIFSHGVG 336 (421)
Q Consensus 275 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~-dg~i~iwd~~~~ 336 (421)
+++ .+.+..+.. +...+. -.+++|+|+|++|++++. |+.|++|++...
T Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 242 LRK-DVGTLAYPTYTIPEFKTG-------------TVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp TTS-STTCBSSCCCBC-----C-------------CEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cCC-CCcceeeccccccccccc-------------ceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 986 555444332 222110 025999999999999998 999999999765
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.98 E-value=1.8e-30 Score=242.67 Aligned_cols=253 Identities=14% Similarity=0.124 Sum_probs=188.0
Q ss_pred ccccccccEEEEEEEEcC-CCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 28 KSLEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 28 ~~~~h~~~V~~v~~~~~~-~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
...+|.+.|++|+| +| ++.+|++|+.||+|++||++++....+..
T Consensus 159 ~~~gH~~~V~~l~f--~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------------------------- 204 (435)
T 4e54_B 159 KGIGAGGSITGLKF--NPLNTNQFYASSMEGTTRLQDFKGNILRVFAS-------------------------------- 204 (435)
T ss_dssp CCCSSSCCCCEEEE--CSSCTTEEEEECSSSCEEEEETTSCEEEEEEC--------------------------------
T ss_pred EccCCCCCEEEEEE--eCCCCCEEEEEeCCCEEEEeeccCCceeEEec--------------------------------
Confidence 34589999999999 55 68899999999999999998754322211
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
. ..+...+.+++|+|++++|++| .||+|++||++ + +.+. .+.+
T Consensus 205 --------------------------~-~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~-~~~~-------~~~~ 248 (435)
T 4e54_B 205 --------------------------S-DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-G-KELW-------NLRM 248 (435)
T ss_dssp --------------------------C-SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-S-CBCC-------CSBC
T ss_pred --------------------------c-CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-c-ceeE-------EEec
Confidence 1 2344567889999999999999 99999999997 3 3332 4578
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
|...|.+++|+|++..+|++++.|+.|++||++..+... .+.. ...|...|.+++|+|+|++|+++
T Consensus 249 h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~----~~~~----------~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 249 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA----SFLY----------SLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS----CCSB----------CCBCSSCEEECCBCTTSSEEEEE
T ss_pred ccceEEeeeecCCCceEEEEecCcceeeEEecccccccc----eEEE----------eeeccccccceeECCCCCeeEEE
Confidence 999999999999986689999999999999998765321 1111 23457899999999999999998
Q ss_pred cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee------------CCCeEEEEe
Q 014644 266 DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS------------YSNLLRIFS 332 (421)
Q Consensus 266 ~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s------------~dg~i~iwd 332 (421)
+. +.|++||+++ +.....+..|....... . ....+.|+|++.++++++ .++.|++||
T Consensus 315 ~~D~~i~iwd~~~-~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd 384 (435)
T 4e54_B 315 DQKSEIRVYSASQ-WDCPLGLIPHPHRHFQH------L---TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFD 384 (435)
T ss_dssp ESSSCEEEEESSS-SSSEEEECCCCCCCCSS------S---CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEEC
T ss_pred cCCCEEEEEECCC-CccceEEeccccccccc------c---eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEE
Confidence 76 9999999986 77666666554321100 0 012456666666555543 346799999
Q ss_pred cCCCCCceeEEecCCCCccce-eeecCCcccccccceeeeecccCc-ccCCC
Q 014644 333 HGVGSAGGITVEAGKNENRKP-ILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
..++........+|...+.++ +|+|+ +. +|++|+ |+. ++|+.
T Consensus 385 ~~~g~~~~~l~~~~~~~v~s~~~fspd--g~-----~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 385 GNSGKMMCQLYDPESSGISSLNEFNPM--GD-----TLASAM-GYHILIWSQ 428 (435)
T ss_dssp SSSCCEEEEECCSSCCCCCCEEEECTT--SS-----CEEEEC-SSEEEECCC
T ss_pred CCCCcEEEEEeCCCCCcEEEEEEECCC--CC-----EEEEEc-CCcEEEEEC
Confidence 998844444456788888887 58988 33 788887 556 99944
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=2.5e-30 Score=239.24 Aligned_cols=261 Identities=12% Similarity=0.058 Sum_probs=205.3
Q ss_pred ceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeee------cCCCCCCcc
Q 014644 115 ATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVD------MKPSNMDDL 186 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~------~~~~~~~~~ 186 (421)
.+++|+.+.. +....+ .+|.+.|++++|+| ++++|+++ .||.|++||+... .....+. .......+|
T Consensus 24 ~~~v~~~~~~---~~~~~~-~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 24 TRRVLGLELN---KDRDVE-RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENS-SRQSYYTCKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHHHTEEEC---TTEEEC-CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCC-SSSSCEEECEEEEECTTCTTCC
T ss_pred cceeeccccC---cceeee-eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCC-cccceEeccccccccccccccC
Confidence 5677777665 666666 88999999999999 99999999 9999999999843 3222211 011122469
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC---CCEEE
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND---GQHLL 263 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~ 263 (421)
...|.+++|+|++..+|++++.|+.|++||+.+++.. ..+.. ...+.++.++|. +.+++
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA----DVFNF--------------EETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE----EEEEC--------------SSCEEEEEECSSCSSCCEEE
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc----eeccC--------------CCceeeeEeecCCCCCcEEE
Confidence 9999999999944389999999999999999987643 22222 567899999985 44888
Q ss_pred EecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEeeCCCeEEEEecCCCCCcee
Q 014644 264 SRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYSNLLRIFSHGVGSAGGI 341 (421)
Q Consensus 264 ~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s~dg~i~iwd~~~~~~~~~ 341 (421)
+++. +.|++||+++ ++.+..+..|...+ .+++|+|+++ ++++++.||.|++||+++......
T Consensus 161 ~~~~~~~v~~~d~~~-~~~~~~~~~~~~~v---------------~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~ 224 (408)
T 4a11_B 161 VGTRGPKVQLCDLKS-GSCSHILQGHRQEI---------------LAVSWSPRYDYILATASADSRVKLWDVRRASGCLI 224 (408)
T ss_dssp EEESSSSEEEEESSS-SCCCEEECCCCSCE---------------EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSE
T ss_pred EEcCCCeEEEEeCCC-cceeeeecCCCCcE---------------EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccc
Confidence 8866 9999999986 78888888887755 7999999988 589999999999999988754444
Q ss_pred EE---------------ecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC--C-------------------
Q 014644 342 TV---------------EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS--G------------------- 384 (421)
Q Consensus 342 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~--~------------------- 384 (421)
.+ .+|...+..++|+|+ + ..|++++.|+. ++|+.. +
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 297 (408)
T 4a11_B 225 TLDQHNGKKSQAVESANTAHNGKVNGLCFTSD--G-----LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKF 297 (408)
T ss_dssp ECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT--S-----SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCC
T ss_pred cccccccccceeeccccccccCceeEEEEcCC--C-----CEEEEecCCCeEEEEECCCCccceecccccccccccccee
Confidence 44 678899999999998 3 38999999999 999321 1
Q ss_pred ----------------------------ccccccccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 385 ----------------------------HHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 385 ----------------------------~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
.+....+|...|++++|+|++++|++++ ++.+++|+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 363 (408)
T 4a11_B 298 TVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVP 363 (408)
T ss_dssp EECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred EEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeC
Confidence 1122346888999999999999999998 566999973
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.3e-29 Score=237.85 Aligned_cols=233 Identities=10% Similarity=0.044 Sum_probs=175.6
Q ss_pred CCCCcceEEEeecCCCCEE-EEE-cCCcEEEEeCCC-CceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCe
Q 014644 135 HAHDFNINSISNNSDCETF-VSA-DDLRINLWNLEI-SDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGF 211 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l-~s~-~d~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~ 211 (421)
.+|.+.|.+++|+|++++| +++ .|++|++||+.. .+.....+. ...|...|.+++|+|++ .+|++++.++.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~v~~~~~sp~~-~~l~~~~~~g~ 172 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK-----RFCFSKRPNAISIAEDD-TTVIIADKFGD 172 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE-----EEECSSCEEEEEECTTS-SEEEEEETTSE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee-----cccCCCCceEEEEcCCC-CEEEEEeCCCc
Confidence 5788899999999999996 788 999999999972 234444431 12567889999999999 99999999999
Q ss_pred EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC---CCEEEEecC-CeEEEEECCCCCcceeE-Ee
Q 014644 212 VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND---GQHLLSRDY-MNLKLWDIRMDSTPVAT-FK 286 (421)
Q Consensus 212 v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~-~~i~i~d~~~~~~~~~~-~~ 286 (421)
|++|++.++......... +.+|...|.+++|+|+ +++|++++. +.|++||+++ ++.+.. +.
T Consensus 173 v~~~~~~~~~~~~~~~~~-------------~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~ 238 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEP-------------ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLF 238 (450)
T ss_dssp EEEEETTSCCCSSCCCCC-------------SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECC
T ss_pred EEEEecCCccccccccee-------------eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-Cceeeeeec
Confidence 999999876532101112 3345889999999999 999999876 9999999986 666666 44
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec---------------------
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA--------------------- 345 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~--------------------- 345 (421)
+|...+ .+++|+ ++++|++++.|+.|++||+.++ .....+..
T Consensus 239 ~h~~~v---------------~~~~~s-d~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 239 GHKHFV---------------SSICCG-KDYLLLSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp CCSSCE---------------EEEEEC-STTEEEEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC-------
T ss_pred CCCCce---------------EEEEEC-CCCEEEEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhccccccccccc
Confidence 676654 799999 9999999999999999999987 44455542
Q ss_pred ----CCCCccceeeecCCcccccccceeeeec-ccCc-ccCCC--C-C----ccccccccccCeEEEEEccCCCeEEEec
Q 014644 346 ----GKNENRKPILQAAPRARRSSLSNLTRGL-YRQA-HENSS--S-G----HHELSYNLSSKLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 346 ----~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~d~~-~iw~~--~-~----~~~~~~~~~~~v~~~~~spd~~~la~~~ 412 (421)
....+..+.+.|+ + .+|++++ .++. ++|+. . . .......+ ..|.+++|+|++.++++++
T Consensus 302 ~~~~~~~~v~~i~~~~~--~-----~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKN--L-----PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp ---CBCCCEEEEEECSS--S-----SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred ccccceEEEEEEEEeCC--C-----CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 2345777888877 3 3777777 7788 99954 2 1 12222334 7899999999654444444
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=5.6e-30 Score=236.84 Aligned_cols=247 Identities=14% Similarity=0.135 Sum_probs=189.6
Q ss_pred ccccccEEEEEEEEcC-CCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAP-NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~-~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...|++++| +| ++++|++|+.||+|+|||+.++......
T Consensus 78 ~~h~~~V~~~~~--~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~----------------------------------- 120 (402)
T 2aq5_A 78 CGHTAPVLDIAW--CPHNDNVIASGSEDCTVMVWEIPDGGLVLPL----------------------------------- 120 (402)
T ss_dssp CCCSSCEEEEEE--CTTCTTEEEEEETTSEEEEEECCTTCCSSCB-----------------------------------
T ss_pred ecCCCCEEEEEe--CCCCCCEEEEEeCCCeEEEEEccCCCCcccc-----------------------------------
Confidence 479999999999 67 8999999999999999999876411000
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
.+++..+ .+|...|.+++|+|++ .+|+++ .|++|++||++ .++....+ ....|
T Consensus 121 ------------------~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~-----~~~~~ 175 (402)
T 2aq5_A 121 ------------------REPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG-TGAAVLTL-----GPDVH 175 (402)
T ss_dssp ------------------CSCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT-TTEEEEEE-----CTTTC
T ss_pred ------------------CCceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC-CCCccEEE-----ecCCC
Confidence 0334455 7899999999999998 699998 99999999998 45555433 11568
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhh-ccccccCCCccccccccc-ceeEEEEcCCCCEEEE
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARIL-RDAAESHGSKSFFTEIIA-SISDIKFANDGQHLLS 264 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~ 264 (421)
...|.+++|+|++ .+|++++.|+.|++||+++++.. ..+ .. |.. .+..+.|+|++++|++
T Consensus 176 ~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~-------------~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 176 PDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVV----AEKDRP-------------HEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp CSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEE----EEEECS-------------SCSSSCCEEEECSTTEEEEE
T ss_pred CCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCcee----eeeccC-------------CCCCcceEEEEcCCCcEEEE
Confidence 8999999999999 99999999999999999987643 222 23 233 3899999999999999
Q ss_pred e---cC-CeEEEEECCCCCcceeEEe-eccCcccccccccCCCcceeeeEEEEcCCCCEEE-EeeCCCeEEEEecCCCCC
Q 014644 265 R---DY-MNLKLWDIRMDSTPVATFK-IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 265 ~---~~-~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~dg~i~iwd~~~~~~ 338 (421)
+ +. +.|++||+++...++.... .+...+ .+++|+|++++|+ +|+.||.|++||+.++..
T Consensus 238 g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 238 GFSRMSERQVALWDTKHLEEPLSLQELDTSSGV---------------LLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EECTTCCEEEEEEETTBCSSCSEEEECCCCSSC---------------EEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred eccCCCCceEEEEcCccccCCceEEeccCCCce---------------eEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 8 44 9999999986344344433 223222 7899999999986 556799999999998754
Q ss_pred ceeEEec--CCCCccceeeecCCcccccccceeeeecccCc-ccC
Q 014644 339 GGITVEA--GKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 339 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
....+.. |..++..++|+|+ +. .++++ ++. ++|
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~--~~-----~~~s~--~~~~~~~ 338 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPK--RG-----LEVNK--CEIARFY 338 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCG--GG-----SCGGG--TEEEEEE
T ss_pred ceEeecccccCCcccceEEecc--cc-----cceec--ceeEEEE
Confidence 3555554 4589999999998 33 55543 335 788
No 100
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=3.9e-30 Score=237.38 Aligned_cols=258 Identities=14% Similarity=0.159 Sum_probs=189.9
Q ss_pred ccccccEEEEEEEEcCC----C---CeEEEEeCCCcEEEeecCCce------eEEeeecCC---CCCcccccccccccce
Q 014644 30 LEIEEKINRVRWCAAPN----G---SMFILSTNDKTIKLWKVRDQK------VKKIKEMDH---FPFVSSENTLLAEKNF 93 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~----~---~~l~t~s~d~~v~lwd~~~~~------~~~~~~~~~---~~~v~~~~~~~~~~~~ 93 (421)
.+|...|++++|+ ++ + .+|++++.|+.|++||+.+++ ...+..... ... +
T Consensus 59 ~~h~~~v~~~~~~--~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------------v 124 (397)
T 1sq9_A 59 FVHKSGLHHVDVL--QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS------------F 124 (397)
T ss_dssp ECCTTCEEEEEEE--EEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSC------------E
T ss_pred ecCCCcEEEEEEe--cccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCc------------E
Confidence 3789999999994 66 8 899999999999999998766 222221110 244 4
Q ss_pred eeccCC----CCcee-eeecccccccceeEEeecc------cceeeeee-----eec------CCCCcceEEEeecCCCC
Q 014644 94 MNEHNP----PSFAH-GYHLEWTENMATKIANVGN------SVHARCQK-----VYP------HAHDFNINSISNNSDCE 151 (421)
Q Consensus 94 ~~~~~~----~~~~~-~~~g~~~~~~~~~~~~~~~------~~~~~~~~-----~~~------~~h~~~v~~l~~~~~~~ 151 (421)
.++.+. ++... ++.++. ++.+++|++.. . +++. .+. ..|...|.+++|+|++
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 198 (397)
T 1sq9_A 125 WALKWGASNDRLLSHRLVATDV--KGTTYIWKFHPFADESNS---LTLNWSPTLELQGTVESPMTPSQFATSVDISERG- 198 (397)
T ss_dssp EEEEEECCC----CEEEEEEET--TSCEEEEEEESSSSHHHH---TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-
T ss_pred EEEEEeeccCCCCceEEEEEeC--CCcEEEEeCCcccccccc---ceeeccCcceeeeeeccccCCCCCceEEEECCCc-
Confidence 444444 45555 555554 56899999987 4 3333 441 3488899999999999
Q ss_pred EEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCc---c---CCCeeEEEEecCCCCeEEEEEcC---CeEEEEECCccc
Q 014644 152 TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDD---L---TEVITSAEFHPIYCNLLAYSSSR---GFVRLVDMRQSA 221 (421)
Q Consensus 152 ~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~~l~s~~~d---~~v~iwd~~~~~ 221 (421)
+|+++ .|+.|++||++ ..+.+..+ .. | ...|.+++|+|++ .+|++++.| +.|++||+++++
T Consensus 199 ~l~~~~~dg~i~i~d~~-~~~~~~~~-------~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 199 LIATGFNNGTVQISELS-TLRPLYNF-------ESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp EEEEECTTSEEEEEETT-TTEEEEEE-------ECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCC
T ss_pred eEEEEeCCCcEEEEECC-CCceeEEE-------eccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCc
Confidence 99999 99999999998 45555554 44 7 8999999999999 999999999 999999999875
Q ss_pred ccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEe------ec------
Q 014644 222 LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFK------IH------ 288 (421)
Q Consensus 222 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~------~~------ 288 (421)
.. ..+...............|...|.+++|+|++++|++++. +.|++||+++ ++.+..+. .|
T Consensus 270 ~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1sq9_A 270 RI----GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT-KERITTLNMHCDDIEIEEDILA 344 (397)
T ss_dssp EE----EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-TEEEEEEECCGGGCSSGGGCCC
T ss_pred cc----ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC-CceeEEEecccCcccchhhhhc
Confidence 43 2222200000000000115789999999999999999876 9999999986 88888888 55
Q ss_pred ---------cCcccccccccCCCcceeeeEEEEcCCC----------CEEEEeeCCCeEEEEecCCC
Q 014644 289 ---------EHLRPKLCDLYNNDSIFDKFECSVSGDG----------LHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 289 ---------~~~~~~~~~~~~~~~~~~~~~~~~sp~~----------~~l~~~s~dg~i~iwd~~~~ 336 (421)
... +.+++|+|++ ++|++++.||.|++|++.++
T Consensus 345 g~~~~~~~~~~~---------------v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 345 VDEHGDSLAEPG---------------VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp BCTTSCBCSSCC---------------EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccccCCc---------------eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 332 3799999998 79999999999999999875
No 101
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=228.53 Aligned_cols=247 Identities=11% Similarity=0.090 Sum_probs=196.7
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|.+++| ++++++|++++.|++|++||+.+++...... +...+. ++.++++..++..+..
T Consensus 72 ~h~~~v~~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~------------~~~~~~~~~~l~~~~~ 135 (369)
T 3zwl_B 72 GHTGTIWSIDV--DCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVK------------RVEFSPCGNYFLAILD 135 (369)
T ss_dssp CCSSCEEEEEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEE------------EEEECTTSSEEEEEEC
T ss_pred hcCCcEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeE------------EEEEccCCCEEEEecC
Confidence 58999999999 7899999999999999999999887433322 445444 4444555555555443
Q ss_pred c---cccceeEEeeccccee--------eeeeeecCCCCc--ceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeee
Q 014644 111 T---ENMATKIANVGNSVHA--------RCQKVYPHAHDF--NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIV 176 (421)
Q Consensus 111 ~---~~~~~~~~~~~~~~~~--------~~~~~~~~~h~~--~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~ 176 (421)
+ ..+.+.+|+....... .....+ ..|.. .+.+++|+|++++|+++ .|+.|++||++........+
T Consensus 136 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 214 (369)
T 3zwl_B 136 NVMKNPGSINIYEIERDSATHELTKVSEEPIHKI-ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI 214 (369)
T ss_dssp CBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE
T ss_pred CccCCCCEEEEEEecCCccceeecccccceeeec-cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE
Confidence 2 2257889988764211 133333 45655 89999999999999999 99999999999545666554
Q ss_pred ecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEc
Q 014644 177 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFA 256 (421)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s 256 (421)
..|...|.+++|+|++ .+|++++.|+.|++||+++++.. ..+.. ...+..++|+
T Consensus 215 -------~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~----~~~~~--------------~~~~~~~~~~ 268 (369)
T 3zwl_B 215 -------DLHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQVL----KKYET--------------DCPLNTAVIT 268 (369)
T ss_dssp -------ECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEEC--------------SSCEEEEEEC
T ss_pred -------ecCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCcee----eeecC--------------CCCceeEEec
Confidence 6788999999999999 99999999999999999987643 22322 5789999999
Q ss_pred CCCCEEEEecC-C--------------eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEE
Q 014644 257 NDGQHLLSRDY-M--------------NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT 321 (421)
Q Consensus 257 ~~~~~l~~~~~-~--------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~ 321 (421)
|+++++++++. + .+++||+.+ ++.+..+.+|...+ .+++|+|++++|++
T Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~v---------------~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 269 PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-EEEIGRVQGHFGPL---------------NTVAISPQGTSYAS 332 (369)
T ss_dssp SSSSEEEEEECCC-------------CEEEEEETTT-CCEEEEEECCSSCE---------------EEEEECTTSSEEEE
T ss_pred CCCceEEEeecCCCceEEEEecCCCcceeEEEecCC-CcchhheecccCcE---------------EEEEECCCCCEEEE
Confidence 99999998865 5 899999986 88888888888765 79999999999999
Q ss_pred eeCCCeEEEEecCCC
Q 014644 322 GSYSNLLRIFSHGVG 336 (421)
Q Consensus 322 ~s~dg~i~iwd~~~~ 336 (421)
++.||.|++|+++.+
T Consensus 333 ~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 333 GGEDGFIRLHHFEKS 347 (369)
T ss_dssp EETTSEEEEEEECHH
T ss_pred EcCCCeEEEEECccc
Confidence 999999999999865
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=8.9e-31 Score=241.17 Aligned_cols=260 Identities=12% Similarity=0.062 Sum_probs=172.8
Q ss_pred CCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeeccc
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNS 124 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 124 (421)
+++.+|++++.|++|+|||+++++....
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~---------------------------------------------------- 126 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQ---------------------------------------------------- 126 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEE----------------------------------------------------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcccee----------------------------------------------------
Confidence 4456899999999999999887653221
Q ss_pred ceeeeeeeecCCCCcceEEEeecC--------CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE
Q 014644 125 VHARCQKVYPHAHDFNINSISNNS--------DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF 195 (421)
Q Consensus 125 ~~~~~~~~~~~~h~~~v~~l~~~~--------~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 195 (421)
.++..+ .+|.+.|++++|+| |+++||++ .|++|+|||+......... .+|..++.+++|
T Consensus 127 ---~~~~~~-~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~--------~~~~~~v~~v~~ 194 (393)
T 4gq1_A 127 ---HVLGGK-SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG--------YPLSSPGISVQF 194 (393)
T ss_dssp ---EEECTT-TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE--------EECSSCEEEEEE
T ss_pred ---eeeccc-CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee--------cCCCCCcEEEEE
Confidence 222334 89999999999998 88999999 9999999999844444433 568899999999
Q ss_pred ecCCCCeEEEEEcCCeEEEEECCcccccccchhhhcccc--------ccCCCcccccccccceeEEEEc-CCCCEEEEec
Q 014644 196 HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAA--------ESHGSKSFFTEIIASISDIKFA-NDGQHLLSRD 266 (421)
Q Consensus 196 ~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~--------~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~ 266 (421)
+|++..+|++++.|++|++||+++++...........+. ..........+|...+.++.|+ ||++.|++++
T Consensus 195 ~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s 274 (393)
T 4gq1_A 195 RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC 274 (393)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC
T ss_pred CCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe
Confidence 999756899999999999999998754321111100000 0001111235677889999987 7999999987
Q ss_pred C-CeEEEEECCCCCcceeEEeeccCccccccc------ccCCCcceeeeEEEEcC--CCCEEEEeeCCCeEEEEecCCCC
Q 014644 267 Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCD------LYNNDSIFDKFECSVSG--DGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 267 ~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~sp--~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
. +++++||+.. ++....+..+...+..... ....... ....|+| ++.++++|+.||.|++||+.++
T Consensus 275 ~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~- 349 (393)
T 4gq1_A 275 KSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSL---LGACPHPRYMDYFATAHSQHGLIQLINTYEK- 349 (393)
T ss_dssp TTSEEEEEEC--------------------CCSCSEEEECSSCCS---SCCEECSSCTTEEEEEETTTTEEEEEETTCT-
T ss_pred CCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcc---eeEEEccCCCCEEEEEECCCCEEEEEECCCC-
Confidence 6 9999999986 5555555444332211100 0001111 2344554 4557788999999999999987
Q ss_pred CceeEEecCCCCccceeeecCCcccccccceeeeecccCcccC
Q 014644 338 AGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHEN 380 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw 380 (421)
.....+.+|..+|.+++|+|+ |+ +||+++.+|..+|
T Consensus 350 ~~~~~~~~~~~~V~svafspd--G~-----~LA~as~~Gv~lv 385 (393)
T 4gq1_A 350 DSNSIPIQLGMPIVDFCWHQD--GS-----HLAIATEGSVLLT 385 (393)
T ss_dssp TCCEEEEECSSCEEEEEECTT--SS-----EEEEEESSEEEEE
T ss_pred cEEEEecCCCCcEEEEEEcCC--CC-----EEEEEeCCCeEEE
Confidence 556677888899999999999 44 8999998887444
No 103
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=9.7e-30 Score=233.70 Aligned_cols=244 Identities=15% Similarity=0.101 Sum_probs=188.6
Q ss_pred eeeeeecCCCCcceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEec-CCCCeEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHP-IYCNLLA 204 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~ 204 (421)
+..+.+ .+|...|++++|+|++ ++|++| .|+.|++||+. ..+....+ ...+|...|.+++|+| ++ .+|+
T Consensus 64 ~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~-----~~~~h~~~v~~~~~~~~~~-~~l~ 135 (383)
T 3ei3_B 64 KLHRTA-SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYD-VQNKTSFI-----QGMGPGDAITGMKFNQFNT-NQLF 135 (383)
T ss_dssp EEEEEE-CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETT-STTCEEEE-----CCCSTTCBEEEEEEETTEE-EEEE
T ss_pred ceEEec-cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCC-Ccccceee-----ecCCcCCceeEEEeCCCCC-CEEE
Confidence 556667 8999999999999999 999999 99999999998 44444433 2357999999999999 56 8999
Q ss_pred EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCccee
Q 014644 205 YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVA 283 (421)
Q Consensus 205 s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~ 283 (421)
+++.|+.|++||++.... ..+..| ..+...+.+++|+|++++|++++. +.|++||++ ++.+.
T Consensus 136 s~~~d~~i~iwd~~~~~~-----~~~~~~----------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~ 198 (383)
T 3ei3_B 136 VSSIRGATTLRDFSGSVI-----QVFAKT----------DSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIF 198 (383)
T ss_dssp EEETTTEEEEEETTSCEE-----EEEECC----------CCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEE
T ss_pred EEeCCCEEEEEECCCCce-----EEEecc----------CCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEE
Confidence 999999999999986332 222221 223578999999999999999876 999999994 77888
Q ss_pred EEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEeeCCCeEEEEecCCCC---CceeEEecCCCCccceeeec-C
Q 014644 284 TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYSNLLRIFSHGVGS---AGGITVEAGKNENRKPILQA-A 358 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~-~ 358 (421)
.+..|...+ .+++|+|+++ +|++++.|+.|++||+++.. .....+ +|...+..+.|+| +
T Consensus 199 ~~~~h~~~v---------------~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 262 (383)
T 3ei3_B 199 KEKLHKAKV---------------THAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD 262 (383)
T ss_dssp EEECSSSCE---------------EEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT
T ss_pred EeccCCCcE---------------EEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC
Confidence 888888765 8999999998 99999999999999999742 223333 7999999999999 6
Q ss_pred CcccccccceeeeecccCc-ccCCC--CCcccccccc-------cc----------CeEEEEEccCCCeEEEec-CCceE
Q 014644 359 PRARRSSLSNLTRGLYRQA-HENSS--SGHHELSYNL-------SS----------KLLHLAWHPTTNLIACAN-GNSLF 417 (421)
Q Consensus 359 ~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~~~-------~~----------~v~~~~~spd~~~la~~~-~~~~~ 417 (421)
...|++++.|+. ++|+. +.......++ .. .+..++|+|++++ +++ ++.++
T Consensus 263 -------~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~ 333 (383)
T 3ei3_B 263 -------STKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTID 333 (383)
T ss_dssp -------SCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEE
T ss_pred -------CCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEE
Confidence 338999999999 99932 2222222222 22 3334556666655 334 67799
Q ss_pred EEeC
Q 014644 418 FHYA 421 (421)
Q Consensus 418 i~~~ 421 (421)
+|+.
T Consensus 334 iwd~ 337 (383)
T 3ei3_B 334 IYDA 337 (383)
T ss_dssp EEET
T ss_pred EEec
Confidence 9974
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.2e-28 Score=223.79 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=168.9
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee-eec
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG-YHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~g 108 (421)
..|.+.|++++| +|++++|++|+.|+ ++||++++.+........ + +..++ ..+....+ ..+
T Consensus 16 ~~h~~~V~~v~f--s~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~-~~~~~------------~~~~~~~~~~~~ 77 (355)
T 3vu4_A 16 NHVSNPVTDYEF--NQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--H-LSKVR------------MLHRTNYVAFVT 77 (355)
T ss_dssp ---CCCCCEEEE--CTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--C-CCEEE------------ECTTSSEEEEEC
T ss_pred ccCCCceEEEEE--CCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--C-eEEEE------------EcCCCCEEEEEE
Confidence 468999999999 79999999888775 789999877633322211 1 21111 11222222 222
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
+. +..+++||..++ +++..+ .|...|.+++|+++ .++.+.|+.|++||+....+.+..+ ..
T Consensus 78 ~~--d~~v~iWd~~~~---~~~~~~--~~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~~~~~~-------~~--- 138 (355)
T 3vu4_A 78 GV--KEVVHIWDDVKK---QDVSRI--KVDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWKRITDD-------IR--- 138 (355)
T ss_dssp SS--TTEEEEEETTTT---EEEEEE--ECSSCEEEEEECSS--EEEEEETTEEEEEESSTTCCBSSCC-------EE---
T ss_pred CC--ccEEEEEECCCC---cEEEEE--ECCCceEEEEEcCC--EEEEEEcCEEEEEECCCCceeeEEe-------cc---
Confidence 22 348999999887 777777 36779999999875 4555667899999998442444332 22
Q ss_pred CeeEEEEecCCCCeEEE--EEcCCeEEEEECCcccccccchhhhccccccCCC-cccccccccceeEEEEcCCCCEEEEe
Q 014644 189 VITSAEFHPIYCNLLAY--SSSRGFVRLVDMRQSALCDHSARILRDAAESHGS-KSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s--~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
+...+++++ ..+++ ++.||.|++||++++............ ..... ...+.+|...|.+++|+|+|++|+++
T Consensus 139 ~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~--~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 139 FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ--KAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp EEEEEEEET---TEEEEEESSCTTCEEEEECCC--------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccc--cccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 445566777 34554 579999999999876421000000000 00001 23356679999999999999999999
Q ss_pred cC-Ce-EEEEECCCCCcceeEEe-e-ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 266 DY-MN-LKLWDIRMDSTPVATFK-I-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 266 ~~-~~-i~i~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
+. ++ |++||+++ ++.+..+. + |...+ .+++|+|++++|++++.|++|++||+...
T Consensus 214 s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v---------------~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 214 SQDGTIIRVFKTED-GVLVREFRRGLDRADV---------------VDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ETTCSEEEEEETTT-CCEEEEEECTTCCSCE---------------EEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred eCCCCEEEEEECCC-CcEEEEEEcCCCCCcE---------------EEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 76 98 99999987 88888887 4 66654 79999999999999999999999999865
No 105
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=8.3e-30 Score=225.63 Aligned_cols=213 Identities=14% Similarity=0.182 Sum_probs=162.3
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
.+|++.|++++|.+..++++|++|+.|++|+|||+.+++.
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~---------------------------------------- 89 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW---------------------------------------- 89 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB----------------------------------------
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce----------------------------------------
Confidence 3799999999995323489999999999999999976531
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCcee-eeeeecCCCCCCc
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQC-FNIVDMKPSNMDD 185 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~~~-~~~~~~~~~~~~~ 185 (421)
.++..+ .+|...|.+++|+|+ +.+|+++ .|++|++||++..... .. .+.+
T Consensus 90 ------------------~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-------~~~~ 143 (297)
T 2pm7_B 90 ------------------SQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI-------IIDA 143 (297)
T ss_dssp ------------------CCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-------EEEC
T ss_pred ------------------EEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-------eeec
Confidence 122233 679999999999997 8899999 9999999999843222 12 2367
Q ss_pred cCCCeeEEEEecCC------------CCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEE
Q 014644 186 LTEVITSAEFHPIY------------CNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDI 253 (421)
Q Consensus 186 ~~~~v~~~~~~p~~------------~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~ 253 (421)
|...|.+++|+|++ .++|++++.|++|++||++.+......... +.+|...|.++
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~-------------l~~H~~~V~~v 210 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-------------LEGHSDWVRDV 210 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE-------------ECCCSSCEEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE-------------ecCCCCceEEE
Confidence 99999999999972 168999999999999999875421111122 34458899999
Q ss_pred EEcCCC---CEEEEecC-CeEEEEECCCCCcc-e-eEE--eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC
Q 014644 254 KFANDG---QHLLSRDY-MNLKLWDIRMDSTP-V-ATF--KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS 325 (421)
Q Consensus 254 ~~s~~~---~~l~~~~~-~~i~i~d~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d 325 (421)
+|+|++ .+|++++. ++|++||++..... . ..+ ..+... +.+++|+|++++|++++.|
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV---------------LWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSC---------------EEEEEECSSSCCEEEEETT
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCc---------------EEEEEECCCCCEEEEEcCC
Confidence 999985 78998875 99999999752211 1 122 123322 2799999999999999999
Q ss_pred CeEEEEecCCC
Q 014644 326 NLLRIFSHGVG 336 (421)
Q Consensus 326 g~i~iwd~~~~ 336 (421)
|.|++|+....
T Consensus 276 ~~v~lw~~~~~ 286 (297)
T 2pm7_B 276 NKVTLWKENLE 286 (297)
T ss_dssp SCEEEEEECTT
T ss_pred CcEEEEEECCC
Confidence 99999998743
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.3e-30 Score=238.03 Aligned_cols=278 Identities=14% Similarity=0.150 Sum_probs=200.4
Q ss_pred cccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecC---CceeEEeeecCCCCCcccccccc--cccceeecc--CC
Q 014644 27 LKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVR---DQKVKKIKEMDHFPFVSSENTLL--AEKNFMNEH--NP 99 (421)
Q Consensus 27 ~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~---~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~--~~ 99 (421)
...++|...|++++| ++++.+|++++.||+|++||++ +++.......+ .+..+.+.+ ....+.++. .+
T Consensus 105 ~~~~~h~~~v~~~~~--~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~ 179 (437)
T 3gre_A 105 SLTYDCSSTVTQITM--IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE---CIRKINLKNFGKNEYAVRMRAFVN 179 (437)
T ss_dssp SEEEECSSCEEEEEE--CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE---EEEEEEGGGGSSCCCEEEEEEEEC
T ss_pred eeeccCCCCEEEEEE--eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc---eeEEEEccCcccccCceEEEEEEc
Confidence 444579999999999 6899999999999999999995 44322221111 344455554 344555554 45
Q ss_pred CCceeeeecccccccceeEEeecccceeeeeeeecCC--CCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeee
Q 014644 100 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHA--HDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIV 176 (421)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~ 176 (421)
++...++.++. ++.+++|++.+. +++..+ .+ |...|++++|+|++++|++| .|++|++||++ .++++..+
T Consensus 180 ~~~~~l~~~~~--d~~i~iwd~~~~---~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~ 252 (437)
T 3gre_A 180 EEKSLLVALTN--LSRVIIFDIRTL---ERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR-FNVLIRSW 252 (437)
T ss_dssp SSCEEEEEEET--TSEEEEEETTTC---CEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT-TTEEEEEE
T ss_pred CCCCEEEEEeC--CCeEEEEeCCCC---eeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC-CccEEEEE
Confidence 66777777766 678999999887 777777 66 89999999999999999999 99999999999 56666554
Q ss_pred ecCCCCCCccCCCeeEEEEec----CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCc-----------c
Q 014644 177 DMKPSNMDDLTEVITSAEFHP----IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSK-----------S 241 (421)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~p----~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~-----------~ 241 (421)
. ..|...|.+++|+| ++ .+|++++.|+.|++||+++++.. ..+..|....... .
T Consensus 253 ~------~~~~~~v~~~~~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 253 S------FGDHAPITHVEVCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQ----YAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp B------CTTCEEEEEEEECTTTCTTE-EEEEEESTTEEEEEEETTTTEEE----EEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred e------cCCCCceEEEEeccccCCCc-cEEEEEcCCCcEEEEEcCCCcEE----EEEEcCCCCCccceecccccccccc
Confidence 1 25777899997665 56 79999999999999999987643 2233221111100 0
Q ss_pred cccc--cccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccc----------------------
Q 014644 242 FFTE--IIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC---------------------- 296 (421)
Q Consensus 242 ~~~~--~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~---------------------- 296 (421)
.+.+ |...|.+++|+ ++++|++++. +.|++||+++ ++....+.+|........
T Consensus 322 ~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (437)
T 3gre_A 322 NFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE-LSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHS 399 (437)
T ss_dssp CCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC-GGGCEEEECC--CCCEEEEEEEETTEEEEEEECC------
T ss_pred eecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC-cccceEEecccccCceEEEEEeecceEEEEEecccccccc
Confidence 1233 78899999999 7889999875 9999999986 777777766432111000
Q ss_pred ---cccCCCcceeeeEEEEcCC--CCEEEEeeCCCeEEEEe
Q 014644 297 ---DLYNNDSIFDKFECSVSGD--GLHFATGSYSNLLRIFS 332 (421)
Q Consensus 297 ---~~~~~~~~~~~~~~~~sp~--~~~l~~~s~dg~i~iwd 332 (421)
...+.+.+ .+++|+++ +.+|++|+.||.|+||+
T Consensus 400 ~~~~~~h~~~I---~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 400 VDDSLYHHDII---NSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -------CCCE---EEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cCcccccccce---eeEeeeccCCceEEEEEcCCceEEEeC
Confidence 00123333 78999987 78999999999999995
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=8.6e-29 Score=232.03 Aligned_cols=300 Identities=22% Similarity=0.299 Sum_probs=202.0
Q ss_pred CCCceeeeccccccCCCccccccccccccEEEEEEEEcCCC--CeEEEEeCCCcEEEeecCCceeEEee-ecCC-CC---
Q 014644 7 SHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVRWCAAPNG--SMFILSTNDKTIKLWKVRDQKVKKIK-EMDH-FP--- 79 (421)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~~~~~~--~~l~t~s~d~~v~lwd~~~~~~~~~~-~~~~-~~--- 79 (421)
..++|.....+++|.++|++++++.+.+.|++++| +|++ .+|++++.|++|++||+.++...... .... .+
T Consensus 67 ~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~--~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~ 144 (447)
T 3dw8_B 67 SRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW--LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYR 144 (447)
T ss_dssp CCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE--CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC-------
T ss_pred cccceeEecccccccccccccccccccCceEEEEE--cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCcccccc
Confidence 45788889999999999999999999999999999 5666 79999999999999999875421100 0000 00
Q ss_pred ---Cccccc-------------------ccccccceeeccCCCCceeeeecccccccceeEEeecccceeeeee------
Q 014644 80 ---FVSSEN-------------------TLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQK------ 131 (421)
Q Consensus 80 ---~v~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------ 131 (421)
.+..+. .......+.++.+++++.+++.+ . ++.+++|++.... ++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~--d~~i~iwd~~~~~--~~~~~~~~~~ 219 (447)
T 3dw8_B 145 DPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D--DLRINLWHLEITD--RSFNIVDIKP 219 (447)
T ss_dssp -CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C--SSEEEEEETTEEE--EEEEEEECCC
T ss_pred CcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C--CCeEEEEECCCCC--ceeeeeeccc
Confidence 000000 01123456666777777777776 2 7889999998431 3333
Q ss_pred -eecCCCCcceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCcee---eeeeecCCCCCCccCC------------CeeEE
Q 014644 132 -VYPHAHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQC---FNIVDMKPSNMDDLTE------------VITSA 193 (421)
Q Consensus 132 -~~~~~h~~~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~~---~~~~~~~~~~~~~~~~------------~v~~~ 193 (421)
.+ .+|...|.+++|+|++ ++|+++ .|++|++||++..... ...+ ..|.. .|.++
T Consensus 220 ~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~ 291 (447)
T 3dw8_B 220 ANM-EELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF-------EEPEDPSNRSFFSEIISSISDV 291 (447)
T ss_dssp SSG-GGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE-------CCC-----CCHHHHHTTCEEEE
T ss_pred ccc-cccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe-------ccCCCccccccccccCceEEEE
Confidence 23 6899999999999998 999999 9999999999843321 3333 44544 89999
Q ss_pred EEecCCCCeEEEEEcCCeEEEEECCc-ccccccchhhhccccccCCCc-ccc-cccccceeEEEEcCCCCEEEEecC-Ce
Q 014644 194 EFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHSARILRDAAESHGSK-SFF-TEIIASISDIKFANDGQHLLSRDY-MN 269 (421)
Q Consensus 194 ~~~p~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~h~~~~~~~-~~~-~~~~~~v~~~~~s~~~~~l~~~~~-~~ 269 (421)
+|+|++ .+|++++. +.|++||++. ++.. ..+..|....... ..+ ......+..++|+|++++|++++. +.
T Consensus 292 ~~s~~g-~~l~~~~~-~~v~iwd~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~ 365 (447)
T 3dw8_B 292 KFSHSG-RYMMTRDY-LSVKVWDLNMENRPV----ETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF 365 (447)
T ss_dssp EECTTS-SEEEEEES-SEEEEEETTCCSSCS----CCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE
T ss_pred EECCCC-CEEEEeeC-CeEEEEeCCCCcccc----ceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCE
Confidence 999999 99999998 9999999987 4432 3444431000000 000 000012345999999999999876 99
Q ss_pred EEEEECCCCCcceeEEeeccCccccc---------------------ccccCCCcceeeeEEEEcCCCCEEEEeeCCCeE
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKL---------------------CDLYNNDSIFDKFECSVSGDGLHFATGSYSNLL 328 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i 328 (421)
|++||+.+ ++.+ .+..+....... ..+.... .+..++|+|++.+||+++.++ +
T Consensus 366 v~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~p~~~~la~~~~~~-~ 439 (447)
T 3dw8_B 366 FRMFDRNT-KRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK---KILHTAWHPKENIIAVATTNN-L 439 (447)
T ss_dssp EEEEETTT-CCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS---CCCEEEECSSSSEEEEECSSC-E
T ss_pred EEEEEcCC-Ccce-eeeecccccccccccCCccccccCCcccccccccccccCC---ceeEEEECCCCCEEEEEecce-e
Confidence 99999986 5544 344433211100 0001112 236899999999999998765 7
Q ss_pred EEEec
Q 014644 329 RIFSH 333 (421)
Q Consensus 329 ~iwd~ 333 (421)
++|.-
T Consensus 440 ~~~~~ 444 (447)
T 3dw8_B 440 YIFQD 444 (447)
T ss_dssp EEEEC
T ss_pred eeecc
Confidence 77764
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=252.00 Aligned_cols=245 Identities=15% Similarity=0.135 Sum_probs=194.2
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC-ceeeeeeecCCCCCCccCCCeeEEEEecC--CCCeEEEEEcCC
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS-DQCFNIVDMKPSNMDDLTEVITSAEFHPI--YCNLLAYSSSRG 210 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d~ 210 (421)
.+|.+.|++++|+|++++|++| .||+|++||+... ...... +.+|...|.+++|+|+ + .+|++++.||
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~-------l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg 77 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT-------LTGHEGPVWRVDWAHPKFG-TILASCSYDG 77 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEE-------ECCCSSCEEEEEECCTTSC-SEEEEEETTS
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCcccee-------ccCCcCceEEEEecCCCCC-CEEEEEeCCC
Confidence 8999999999999999999999 9999999999732 223333 3789999999999988 7 9999999999
Q ss_pred eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC--CCEEEEecC-CeEEEEECCCCC-cceeEEe
Q 014644 211 FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND--GQHLLSRDY-MNLKLWDIRMDS-TPVATFK 286 (421)
Q Consensus 211 ~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~-~~i~i~d~~~~~-~~~~~~~ 286 (421)
.|++||+.+++.. ....+ ..|...|.+++|+|+ ++++++++. |.|++||++... .....+.
T Consensus 78 ~I~vwd~~~~~~~--~~~~~-------------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 78 KVLIWKEENGRWS--QIAVH-------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp CEEEEEEETTEEE--EEEEE-------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE
T ss_pred eEEEEECCCCccc--ccccc-------------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee
Confidence 9999999876411 11222 334789999999999 999999876 999999998631 2344455
Q ss_pred eccCcccccccccCCCcceeeeEEEEcC-------------CCCEEEEeeCCCeEEEEecCCCC---CceeEEecCCCCc
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSG-------------DGLHFATGSYSNLLRIFSHGVGS---AGGITVEAGKNEN 350 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp-------------~~~~l~~~s~dg~i~iwd~~~~~---~~~~~~~~~~~~~ 350 (421)
+|...+ .+++|+| ++.++++|+.||.|++||++++. .....+.+|..++
T Consensus 143 ~~~~~v---------------~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 143 AHAIGV---------------NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp CCSSCE---------------EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred cCCCce---------------EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcE
Confidence 666544 7999999 58999999999999999998764 2356778999999
Q ss_pred cceeeecCCcccccccceeeeecccCc-ccCCCCC-------ccccccccccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 351 RKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSG-------HHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~-------~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
.+++|+|+... ...|++|+.|+. ++|+... .......+...|++++|+|++++|++++ ++.+++|+.
T Consensus 208 ~~l~~sp~~~~----~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~ 283 (753)
T 3jro_A 208 RDVAWSPTVLL----RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (753)
T ss_dssp EEEEECCCCSS----SEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBC
T ss_pred EEEEeccCCCC----CCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEec
Confidence 99999987210 138999999999 9993221 3334446788999999999999999988 566999973
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=6.3e-28 Score=226.18 Aligned_cols=264 Identities=14% Similarity=0.175 Sum_probs=207.6
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|.++.| + ++++++|+.||+|++||+.+++..... ..+...|.++++. ...+..++.
T Consensus 157 ~h~~~v~~~~~--~--~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--------------~~~l~s~s~ 217 (445)
T 2ovr_B 157 GHTGGVWSSQM--R--DNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLH--------------EKRVVSGSR 217 (445)
T ss_dssp CCSSCEEEEEE--E--TTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEE--------------TTEEEEEET
T ss_pred CCCCCEEEEEe--c--CCEEEEEeCCCeEEEEECCcCcEEEEE-CCCCCcEEEEEec--------------CCEEEEEeC
Confidence 68999999999 3 579999999999999999988733222 2345555544442 223444443
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
++.+++|+..+. +++..+ .+|...|.+++| ++++|+++ .|+.|++||++ .++.+..+ .+|...
T Consensus 218 --dg~i~~wd~~~~---~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~-------~~~~~~ 281 (445)
T 2ovr_B 218 --DATLRVWDIETG---QCLHVL-MGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPE-TETCLHTL-------QGHTNR 281 (445)
T ss_dssp --TSEEEEEESSSC---CEEEEE-ECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGG-GTEEEEEE-------CCCSSC
T ss_pred --CCEEEEEECCCC---cEEEEE-cCCcccEEEEEE--CCCEEEEEcCCCEEEEEECC-CCcEeEEe-------cCCCCc
Confidence 568999999887 778888 899999999999 68889998 99999999998 55555544 678999
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 268 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 268 (421)
|.+++| ++ ..+++++.|+.|++||+++++.. ..+.. |...+.++.++ ++++++++. +
T Consensus 282 v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~----~~~~~-------------~~~~v~~~~~~--~~~l~~~~~dg 339 (445)
T 2ovr_B 282 VYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCI----HTLTG-------------HQSLTSGMELK--DNILVSGNADS 339 (445)
T ss_dssp EEEEEE--CS-SEEEEEETTSCEEEEETTTCCEE----EEECC-------------CCSCEEEEEEE--TTEEEEEETTS
T ss_pred eEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEE----EEEcC-------------CcccEEEEEEe--CCEEEEEeCCC
Confidence 999999 66 89999999999999999987643 33333 36677777774 678888865 9
Q ss_pred eEEEEECCCCCcceeEEee---ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEE--
Q 014644 269 NLKLWDIRMDSTPVATFKI---HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITV-- 343 (421)
Q Consensus 269 ~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~-- 343 (421)
.|++||+++ ++.+..+.. |...+ .+++|+ +++|++|+.||.|++||+.++ .....+
T Consensus 340 ~i~vwd~~~-~~~~~~~~~~~~~~~~v---------------~~~~~~--~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~ 400 (445)
T 2ovr_B 340 TVKIWDIKT-GQCLQTLQGPNKHQSAV---------------TCLQFN--KNFVITSSDDGTVKLWDLKTG-EFIRNLVT 400 (445)
T ss_dssp CEEEEETTT-CCEEEEECSTTSCSSCE---------------EEEEEC--SSEEEEEETTSEEEEEETTTC-CEEEEEEE
T ss_pred eEEEEECCC-CcEEEEEccCCCCCCCE---------------EEEEEC--CCEEEEEeCCCeEEEEECCCC-ceeeeeec
Confidence 999999986 888888876 33332 678884 689999999999999999987 555555
Q ss_pred ---ecCCCCccceeeecCCcccccccceeeeecccCc
Q 014644 344 ---EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA 377 (421)
Q Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~ 377 (421)
.+|.+.+..++|+|+ ...|++|+.||.
T Consensus 401 ~~~~~~~~~v~~~~~s~~-------~~~la~~~~dg~ 430 (445)
T 2ovr_B 401 LESGGSGGVVWRIRASNT-------KLVCAVGSRNGT 430 (445)
T ss_dssp CTTGGGTCEEEEEEECSS-------EEEEEEECSSSS
T ss_pred cccCCCCceEEEEEecCC-------EEEEEEcccCCC
Confidence 478889999999988 448999999884
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.8e-28 Score=217.80 Aligned_cols=247 Identities=17% Similarity=0.208 Sum_probs=185.1
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecc
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLE 109 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 109 (421)
-+|...|++++| ++++++|++|+.|++|++||+++++...... .+...+.+ ... ....++.++
T Consensus 64 ~~~~~~V~~v~~--~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-~h~~~~~~------------~~~--~~~~l~s~~ 126 (318)
T 4ggc_A 64 EQPGEYISSVAW--IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT-SHSARVGS------------LSW--NSYILSSGS 126 (318)
T ss_dssp CSTTCCEEEEEE--CTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEE------------EEE--ETTEEEEEE
T ss_pred cCCCCeEEEEEE--CCCCCEEEEEECCCcEEEeecCCceeEEEec-CccceEEE------------eec--CCCEEEEEe
Confidence 368889999999 7999999999999999999999988433322 23332221 111 122344443
Q ss_pred cccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 110 WTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
. ...+++|+.... ...+..+ .+|...+..+.+++++++|+++ .|++|++||+++........ .....+..
T Consensus 127 ~--~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~ 197 (318)
T 4ggc_A 127 R--SGHIHHHDVRVA--EHHVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL----QTFTQHQG 197 (318)
T ss_dssp T--TSEEEEEETTSS--SCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCS----EEECCCCS
T ss_pred c--CCceEeeecCCC--ceeEEEE-cCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccce----eeecccCC
Confidence 3 445667766554 2445556 7999999999999999999999 99999999998433221111 11256778
Q ss_pred CeeEEEEecCCCCeEE--EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-
Q 014644 189 VITSAEFHPIYCNLLA--YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR- 265 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~--s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~- 265 (421)
.|.++.++|++...+. +++.+++|++||.+..... .... +...+..+.|+|++..++++
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~----~~~~--------------~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL----SAVD--------------AHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE----EEEE--------------CSSCEEEEEEETTTTEEEEEE
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc----cccc--------------ceeeeeeeeecccccceEEEE
Confidence 8999999998855553 4557899999999876532 1111 25678999999999988764
Q ss_pred -cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 266 -DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 266 -~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.. +.|++||+++ ++++..+.+|...+ ++++|+|+|++|++|+.||+|+|||+...
T Consensus 260 g~~d~~i~iwd~~~-~~~~~~l~gH~~~V---------------~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 260 GFAQNQLVIWKYPT-MAKVAELKGHTSRV---------------LSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CTTTCCEEEEETTT-CCEEEEECCCSSCE---------------EEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EcCCCEEEEEECCC-CcEEEEEcCCCCCE---------------EEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 23 9999999987 89999999998865 89999999999999999999999998754
No 111
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.1e-28 Score=226.51 Aligned_cols=284 Identities=10% Similarity=0.096 Sum_probs=209.3
Q ss_pred ccccccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 26 YLKSLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 26 ~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
.+..+.+...+.+++| +|++.++++++.|++|++||+.+++......
T Consensus 115 ~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------------------------------- 161 (433)
T 3bws_A 115 FISRFKTGFQPKSVRF--IDNTRLAIPLLEDEGMDVLDINSGQTVRLSP------------------------------- 161 (433)
T ss_dssp EEEEEECSSCBCCCEE--SSSSEEEEEBTTSSSEEEEETTTCCEEEECC-------------------------------
T ss_pred EEEEEcCCCCceEEEE--eCCCeEEEEeCCCCeEEEEECCCCeEeeecC-------------------------------
Confidence 3444445566778999 6777788888889999999998876322110
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 184 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 184 (421)
...+ .+|...|.+++|+|++++++++ .|+.|++||++ .++....+ .
T Consensus 162 ------------------------~~~~-~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~-~~~~~~~~-------~ 208 (433)
T 3bws_A 162 ------------------------PEKY-KKKLGFVETISIPEHNELWVSQMQANAVHVFDLK-TLAYKATV-------D 208 (433)
T ss_dssp ------------------------CHHH-HTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT-TCCEEEEE-------E
T ss_pred ------------------------cccc-cccCCceeEEEEcCCCEEEEEECCCCEEEEEECC-CceEEEEE-------c
Confidence 0112 5788999999999999999999 99999999998 45555444 5
Q ss_pred ccCCCeeEEEEecCCCCeEE-EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE
Q 014644 185 DLTEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 263 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (421)
.|...+.+++|+|++ ..++ +++.|+.|++||+++++.. ..+.. ...+.+++|+|+|++++
T Consensus 209 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~~~d~~~~~~~----~~~~~--------------~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 209 LTGKWSKILLYDPIR-DLVYCSNWISEDISVIDRKTKLEI----RKTDK--------------IGLPRGLLLSKDGKELY 269 (433)
T ss_dssp CSSSSEEEEEEETTT-TEEEEEETTTTEEEEEETTTTEEE----EECCC--------------CSEEEEEEECTTSSEEE
T ss_pred CCCCCeeEEEEcCCC-CEEEEEecCCCcEEEEECCCCcEE----EEecC--------------CCCceEEEEcCCCCEEE
Confidence 678889999999999 6664 5558999999999887543 23333 34589999999999988
Q ss_pred Eec---------CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEE-EEeeCCCeEEEEec
Q 014644 264 SRD---------YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF-ATGSYSNLLRIFSH 333 (421)
Q Consensus 264 ~~~---------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~~s~dg~i~iwd~ 333 (421)
+++ ++.|++||+++ ++.+..+.... .+ .+++|+|+++.+ ++++.|+.|++||+
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~~~~~-~~---------------~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDK-EKLIDTIGPPG-NK---------------RHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTT-TEEEEEEEEEE-CE---------------EEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred EEECCCCccccCCCeEEEEECCC-CcEEeeccCCC-Cc---------------ceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 765 47999999986 66665553222 22 689999999755 66688999999999
Q ss_pred CCCCCceeEEecCCCCccceeeecCCcccccccceeeeecc---------------cCc-ccCCC-CCccccccccccCe
Q 014644 334 GVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLY---------------RQA-HENSS-SGHHELSYNLSSKL 396 (421)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---------------d~~-~iw~~-~~~~~~~~~~~~~v 396 (421)
.++ .....+. +...+..++++|+ ++ .|++++. ||. .+|+. .............+
T Consensus 333 ~~~-~~~~~~~-~~~~~~~~~~s~d--g~-----~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~ 403 (433)
T 3bws_A 333 KEK-KVQKSIP-VFDKPNTIALSPD--GK-----YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQP 403 (433)
T ss_dssp TTT-EEEEEEE-CSSSEEEEEECTT--SS-----EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSE
T ss_pred CCC-cEEEEec-CCCCCCeEEEcCC--CC-----EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCC
Confidence 976 4444444 6677889999988 33 5555544 467 88843 22233333345679
Q ss_pred EEEEEccCCCeEEEec--CCceEEEe
Q 014644 397 LHLAWHPTTNLIACAN--GNSLFFHY 420 (421)
Q Consensus 397 ~~~~~spd~~~la~~~--~~~~~i~~ 420 (421)
..++|+|++++|++++ ++.+++|+
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 9999999999998765 67799997
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-28 Score=214.95 Aligned_cols=238 Identities=11% Similarity=0.157 Sum_probs=193.2
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
++.+.+ .+|.+.|++++| |++++|+++ .||.|++||+. ..+....+ ..|...|.+++|+|++ .+|+++
T Consensus 9 ~~~~~l-~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~-~~~~~~~~-------~~~~~~v~~~~~~~~~-~~l~~~ 77 (313)
T 3odt_A 9 QLSATL-KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKD-DQWLGTVV-------YTGQGFLNSVCYDSEK-ELLLFG 77 (313)
T ss_dssp EEEEEE-CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEES-SSEEEEEE-------EECSSCEEEEEEETTT-TEEEEE
T ss_pred HHHHHh-hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECC-CCEEEEEe-------ecCCccEEEEEECCCC-CEEEEe
Confidence 666777 899999999999 999999999 99999999998 55555444 6788999999999999 999999
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
+.|+.|++|++...... +.... +..|...|.+++| +++++++++. +.|++|| . ++....+
T Consensus 78 ~~dg~i~~~~~~~~~~~-~~~~~-------------~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~-~~~~~~~ 138 (313)
T 3odt_A 78 GKDTMINGVPLFATSGE-DPLYT-------------LIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--E-GSLVYNL 138 (313)
T ss_dssp ETTSCEEEEETTCCTTS-CC-CE-------------ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--T-TEEEEEE
T ss_pred cCCCeEEEEEeeecCCC-Ccccc-------------hhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--C-CcEEEec
Confidence 99999999999874321 11122 3445889999999 5778888866 9999999 3 6777788
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCCCeEEEEecCCCCCceeEEec-CCCCccceeeecCCcccc
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYSNLLRIFSHGVGSAGGITVEA-GKNENRKPILQAAPRARR 363 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 363 (421)
..|...+ .+++|.| ++.++++++.||.|++||.. .....+.. |...+..+.++++
T Consensus 139 ~~~~~~v---------------~~~~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~----- 195 (313)
T 3odt_A 139 QAHNASV---------------WDAKVVSFSENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDD----- 195 (313)
T ss_dssp ECCSSCE---------------EEEEEEETTTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEET-----
T ss_pred ccCCCce---------------eEEEEccCCCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCC-----
Confidence 8887754 7889888 89999999999999999933 44566666 9999999999988
Q ss_pred cccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 364 SSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 364 ~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
.. +++++.++. ++| ..++.+....+|...|++++|+|++.+++.+.++.+++|+.
T Consensus 196 --~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 196 --GH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSK 253 (313)
T ss_dssp --TE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECT
T ss_pred --Ce-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEEC
Confidence 33 889999999 999 44556666678999999999999996444444778999973
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=5.9e-28 Score=210.30 Aligned_cols=283 Identities=11% Similarity=0.040 Sum_probs=182.5
Q ss_pred cEEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCce-eEEeeecCCC-CCcccccccccccceeeccCCCCce-eeeeccc
Q 014644 35 KINRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQK-VKKIKEMDHF-PFVSSENTLLAEKNFMNEHNPPSFA-HGYHLEW 110 (421)
Q Consensus 35 ~V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~-~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~ 110 (421)
.+.++.|- .++ .+.++......+|++|+..++. -+++...+++ .+|..+.+.+....+.|.+...-.. .+....+
T Consensus 41 ~~~~~~~~-~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWE-RAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC-----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeec-cCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 46677772 233 3345555557799999998872 2333333343 4677777777666666655532211 0000000
Q ss_pred ccc-cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE---cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 111 TEN-MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA---DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 111 ~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~---~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
..+ .... +.+-. .+|...|..+ ++++++.++ .|+.|++|++.+.++.+..+ .+|
T Consensus 120 spd~~~~~----------~~l~s--~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~-------~~~ 177 (356)
T 2w18_A 120 SSDDESEK----------QVLLK--SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ-------FLM 177 (356)
T ss_dssp ------CC----------EEEEE--EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEE-------EEC
T ss_pred CCCccccc----------cEEEe--CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeee-------ccC
Confidence 000 0000 11111 2444445554 567776664 49999999997566665543 678
Q ss_pred CCCeeEEEEec---CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE
Q 014644 187 TEVITSAEFHP---IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 263 (421)
Q Consensus 187 ~~~v~~~~~~p---~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (421)
...+..++|+| ++ .+|++++.|++|+|||+.+++.. +.+..| ..+...+.+++|+|+|++++
T Consensus 178 ~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l----~tL~g~----------~~~v~~v~~vafSpdG~~lv 242 (356)
T 2w18_A 178 PPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLL----KKMHID----------DSYQASVCHKAYSEMGLLFI 242 (356)
T ss_dssp CCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEE----EEEECC----------C---CCCEEEEEEETTEEEE
T ss_pred CCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEE----EEEcCC----------CcceeeeEEEEECCCCCEEE
Confidence 88899999999 66 89999999999999999998755 444432 11134677889999999874
Q ss_pred ------------EecC-CeEEEEECCCCCcceeEEe-----eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC
Q 014644 264 ------------SRDY-MNLKLWDIRMDSTPVATFK-----IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS 325 (421)
Q Consensus 264 ------------~~~~-~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d 325 (421)
+|+. ++|++||..+ ++.+..+. +|.... .+..+ ++.++++|+.|
T Consensus 243 s~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~---------------lsg~~--sg~~lASgS~D 304 (356)
T 2w18_A 243 VLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRF---------------LEGDV--KDHCAAAILTS 304 (356)
T ss_dssp EEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCE---------------EEEEE--ETTEEEEEETT
T ss_pred EeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCccee---------------Ecccc--CCCEEEEEcCC
Confidence 4554 8999999986 77665542 222210 23333 48899999999
Q ss_pred CeEEEEecCCCCCceeEEecCCCCcc-ceeeecCCcccccccceeeeecccCc-ccCC
Q 014644 326 NLLRIFSHGVGSAGGITVEAGKNENR-KPILQAAPRARRSSLSNLTRGLYRQA-HENS 381 (421)
Q Consensus 326 g~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~ 381 (421)
++|+|||+.++ +...++.+|...+. .++|+|+ ++ +|++|+.|++ +||+
T Consensus 305 gTIkIWDl~tG-k~l~tL~gH~~~vvs~vafSPD--G~-----~LaSGS~D~TIklWd 354 (356)
T 2w18_A 305 GTIAIWDLLLG-QCTALLPPVSDQHWSFVKWSGT--DS-----HLLAGQKDGNIFVYH 354 (356)
T ss_dssp SCEEEEETTTC-SEEEEECCC--CCCCEEEECSS--SS-----EEEEECTTSCEEEEE
T ss_pred CcEEEEECCCC-cEEEEecCCCCCeEEEEEECCC--CC-----EEEEEECCCcEEEec
Confidence 99999999998 77888999988766 4899998 33 8999999999 9983
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=1.8e-28 Score=221.45 Aligned_cols=239 Identities=11% Similarity=0.095 Sum_probs=185.3
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCC-eEEEEEcCCeE
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN-LLAYSSSRGFV 212 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~d~~v 212 (421)
.+|.+.|.+++|+|++++|+++ .|+.|++|++.......... .+.+|...|.+++|+|++ . +|++++.||.|
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i 81 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL-----QSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEI 81 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE-----EEEECSSCEEEEEEEESS-SEEEEEEETTSCE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce-----eeeecCCceEEEEECCCC-CcEEEEEcCCCeE
Confidence 7899999999999999999999 99999999998443111111 125788999999999998 9 99999999999
Q ss_pred EEEEC-CcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCC--------Ccce
Q 014644 213 RLVDM-RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMD--------STPV 282 (421)
Q Consensus 213 ~iwd~-~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~--------~~~~ 282 (421)
++||+ ..+.. ..+.. ..|...|.+++|+| +.++++++. +.|++||+++. ++++
T Consensus 82 ~~wd~~~~~~~-----~~~~~-----------~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 82 LKVDLIGSPSF-----QALTN-----------NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EEECSSSSSSE-----EECBS-----------CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS
T ss_pred EEEEeccCCce-----Eeccc-----------cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee
Confidence 99999 76542 22222 01478999999999 999998876 99999998731 2233
Q ss_pred eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC-CCC-ceeEEecCCCCccceeeec-CC
Q 014644 283 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV-GSA-GGITVEAGKNENRKPILQA-AP 359 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~ 359 (421)
..+. +... +.+++|+|++ +++++.|+.|++||+++ ... .......|...+..+.|+| +
T Consensus 145 ~~~~-~~~~---------------v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~- 205 (342)
T 1yfq_A 145 NNTK-VKNK---------------IFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE- 205 (342)
T ss_dssp SSSS-SCCC---------------EEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG-
T ss_pred eEEe-eCCc---------------eEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC-
Confidence 3333 3332 2799999987 89999999999999998 533 3445567888999999998 7
Q ss_pred cccccccceeeeecccCc-ccC--CCC------Ccccccccccc---------CeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 360 RARRSSLSNLTRGLYRQA-HEN--SSS------GHHELSYNLSS---------KLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 360 ~~~~~~~~~l~~g~~d~~-~iw--~~~------~~~~~~~~~~~---------~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
...|++++.++. ++| ... ........|.. .|.+++|+|++++|++++ ++.+++|+
T Consensus 206 ------~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 206 ------QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp ------GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred ------CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 338999999999 998 332 33444445544 999999999999999998 55799997
Q ss_pred C
Q 014644 421 A 421 (421)
Q Consensus 421 ~ 421 (421)
.
T Consensus 280 ~ 280 (342)
T 1yfq_A 280 L 280 (342)
T ss_dssp T
T ss_pred C
Confidence 4
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-28 Score=226.82 Aligned_cols=258 Identities=9% Similarity=-0.024 Sum_probs=189.0
Q ss_pred ceeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCce
Q 014644 92 NFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQ 171 (421)
Q Consensus 92 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~ 171 (421)
.+.+++++++++.+++++. +.+++ +. +..+.+ .+|...|++++|+|+| .++.+.+|+.+ ...
T Consensus 17 ~v~sv~~SpDG~~iASas~--D~TV~--d~------~~~~~l-~gh~~~v~~V~FsPdg------~~~~~~~~~~~-~~~ 78 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFP--DISIG--QP------KYAKDI-NCNSKNLFHVKEFPLE------FENKLDFELAQ-QNG 78 (588)
T ss_dssp SSCCEEECTTSCEEEECSS--SEEEE--EE------CCCSCC-SSBGGGTEEEEEECCC------CCCTTTTSCCC-SSC
T ss_pred cEEEEEECCCCCEEEEEcC--Cceee--cc------ccccee-cCCCccEEEEEECCCC------CcceEEEEeCC-Cce
Confidence 5666777788888888776 44555 32 333444 7999999999999999 45555555544 222
Q ss_pred eeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccccccee
Q 014644 172 CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASIS 251 (421)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~ 251 (421)
.. ++ .|...|.+++|+|+| ..||+++.||.|++||... . ...+. |... . ....+.
T Consensus 79 ~~--------~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~----l~~l~-~~~~-~-------~~~sv~ 133 (588)
T 2j04_A 79 LL--------NS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--M----LTNLD-SKGN-L-------SSRTYH 133 (588)
T ss_dssp SS--------TT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--E----EEECC-CSSC-S-------TTTCEE
T ss_pred Ee--------ec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--e----eeecc-CCCc-c-------ccccEE
Confidence 11 11 457899999999999 9999999999999999543 1 12222 2000 0 012599
Q ss_pred EEEEcCCCCEEEEecC-CeEEEEECCCCCc-------ceeEEe----eccCcccccccccCCCcceeeeEEEEcCCCCEE
Q 014644 252 DIKFANDGQHLLSRDY-MNLKLWDIRMDST-------PVATFK----IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF 319 (421)
Q Consensus 252 ~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 319 (421)
+++|||||++|++|++ |+|+|||+.. +. .+..+. +|...+ .+++|+|+| +
T Consensus 134 svafSPDG~~LAsgs~DGtVkIWd~~~-~~l~~~~~i~l~ti~~~~~gh~~~V---------------~sVawSPdg--L 195 (588)
T 2j04_A 134 CFEWNPIESSIVVGNEDGELQFFSIRK-NSENTPEFYFESSIRLSDAGSKDWV---------------THIVWYEDV--L 195 (588)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEECCC-CTTTCCCCEEEEEEECSCTTCCCCE---------------EEEEEETTE--E
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCC-CccccccceeeeeeecccccccccE---------------EEEEEcCCc--E
Confidence 9999999999999986 9999999986 53 245653 334433 899999999 8
Q ss_pred EEeeCCCeEEEEecCCCCC--ceeEE-ecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC-Ccc-ccccccc
Q 014644 320 ATGSYSNLLRIFSHGVGSA--GGITV-EAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS-GHH-ELSYNLS 393 (421)
Q Consensus 320 ~~~s~dg~i~iwd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~-~~~~~~~ 393 (421)
++++.|+.|++||+..+.. ...++ .+|...|.+++|+ + . .|++++ ++. ++|+.. +.. ....+|.
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g---~-----~LASa~-~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-D---Y-----KVVLTC-PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-T---T-----EEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-C---C-----EEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence 8899999999999987642 23456 4889999999998 2 2 688887 467 999533 333 3334899
Q ss_pred cCeEEEEE--ccCCCeEEEecCCceEEEe
Q 014644 394 SKLLHLAW--HPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 394 ~~v~~~~~--spd~~~la~~~~~~~~i~~ 420 (421)
..|.+++| +||+..|++++.++.++|.
T Consensus 266 ~~V~~va~~~s~d~~~La~a~edG~klw~ 294 (588)
T 2j04_A 266 ENFHIIPLNHEKESTILLMSNKTSYKVLL 294 (588)
T ss_dssp SCCCEEEETTCSSCEEEEECSSCEEEEEE
T ss_pred ceEEEEEeeeCCCCCEEEEEcCCCCEEEe
Confidence 99999999 9999999999955557775
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=9.7e-28 Score=224.17 Aligned_cols=231 Identities=12% Similarity=0.198 Sum_probs=187.3
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|.+++| ++++|++|+.||+|++||+.+++
T Consensus 171 ~h~~~v~~l~~----~~~~l~sg~~dg~i~vwd~~~~~------------------------------------------ 204 (435)
T 1p22_A 171 GHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGE------------------------------------------ 204 (435)
T ss_dssp CCSSCEEEEEC----CSSEEEEEETTSCEEEEESSSCC------------------------------------------
T ss_pred CCCCcEEEEEE----CCCEEEEEcCCCeEEEEECCCCc------------------------------------------
Confidence 68999999988 47899999999999999998754
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
++..+ .+|...|.+++|+ +..|+++ .|++|++||+.... ..... ..+.+|...
T Consensus 205 ------------------~~~~~-~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~-~~~~~----~~~~~~~~~ 258 (435)
T 1p22_A 205 ------------------MLNTL-IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPT-DITLR----RVLVGHRAA 258 (435)
T ss_dssp ------------------EEEEE-CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSS-CCEEE----EEECCCSSC
T ss_pred ------------------EEEEE-cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCC-Cceee----eEecCCCCc
Confidence 22334 6889999999997 4588888 99999999998433 32111 123789999
Q ss_pred eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C
Q 014644 190 ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M 268 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 268 (421)
|.+++| ++ .+|++++.||.|++||+++++.. ..+.. |...+.++.++ +.++++++. +
T Consensus 259 v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~----~~~~~-------------~~~~v~~~~~~--~~~l~~g~~dg 316 (435)
T 1p22_A 259 VNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFV----RTLNG-------------HKRGIACLQYR--DRLVVSGSSDN 316 (435)
T ss_dssp EEEEEE--ET-TEEEEEETTSEEEEEETTTCCEE----EEEEC-------------CSSCEEEEEEE--TTEEEEEETTS
T ss_pred EEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEE----EEEcC-------------CCCcEEEEEeC--CCEEEEEeCCC
Confidence 999999 55 89999999999999999987543 33333 47789999984 678888865 9
Q ss_pred eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC--------ce
Q 014644 269 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA--------GG 340 (421)
Q Consensus 269 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~--------~~ 340 (421)
.|++||+++ ++.+..+.+|...+ .+++| ++++|++|+.||.|++||+.++.. ..
T Consensus 317 ~i~iwd~~~-~~~~~~~~~h~~~v---------------~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 378 (435)
T 1p22_A 317 TIRLWDIEC-GACLRVLEGHEELV---------------RCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL 378 (435)
T ss_dssp CEEEEETTT-CCEEEEECCCSSCE---------------EEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEE
T ss_pred eEEEEECCC-CCEEEEEeCCcCcE---------------EEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchhe
Confidence 999999987 88888898888765 67777 788999999999999999876521 57
Q ss_pred eEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCC
Q 014644 341 ITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSS 382 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~ 382 (421)
..+.+|.+.+..+.+... .|++|+.||. ++|+.
T Consensus 379 ~~~~~h~~~v~~l~~~~~---------~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 379 RTLVEHSGRVFRLQFDEF---------QIVSSSHDDTILIWDF 412 (435)
T ss_dssp EEECCCSSCCCCEEECSS---------CEEECCSSSEEEEEC-
T ss_pred eeccCCCCCeEEEEeCCC---------EEEEEeCCCEEEEEEC
Confidence 788999999999999433 7999999999 99944
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.1e-26 Score=212.00 Aligned_cols=228 Identities=9% Similarity=0.057 Sum_probs=169.4
Q ss_pred ceEEEeecCCCCEE-EEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE-EEEcCCeEEEEE
Q 014644 140 NINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA-YSSSRGFVRLVD 216 (421)
Q Consensus 140 ~v~~l~~~~~~~~l-~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~d~~v~iwd 216 (421)
.+.+++|+|++++| +++ .|++|++||+. .++....+ . +...+.+++|+|++ +.|+ +++.++.|++||
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~-~~~~~~~~-------~-~~~~v~~~~~spdg-~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTA-TNNVIATV-------P-AGSSPQGVAVSPDG-KQVYVTNMASSTLSVID 102 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETT-TTEEEEEE-------E-CSSSEEEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECC-CCeEEEEE-------E-CCCCccceEECCCC-CEEEEEECCCCEEEEEE
Confidence 48999999999987 567 89999999998 55665554 2 22389999999999 7665 555679999999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE-EEecC-CeEEEEECCCCCcceeEEeeccCcccc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL-LSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPK 294 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~ 294 (421)
+.+++.. ..+.. ...+.+++|+|+|+++ ++++. +.|++||+++ ++.+..+..+...
T Consensus 103 ~~~~~~~----~~~~~--------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~--- 160 (391)
T 1l0q_A 103 TTSNTVA----GTVKT--------------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINTVSVGRSP--- 160 (391)
T ss_dssp TTTTEEE----EEEEC--------------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEECCSSE---
T ss_pred CCCCeEE----EEEeC--------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEecCCCc---
Confidence 9987643 23333 3468999999999987 56665 9999999986 7777777665543
Q ss_pred cccccCCCcceeeeEEEEcCCCCEE-EEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeec
Q 014644 295 LCDLYNNDSIFDKFECSVSGDGLHF-ATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGL 373 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~sp~~~~l-~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 373 (421)
.+++|+|++++| ++++.++.|++||+.++ .....+. +...+..++++|+ ++ .|++++
T Consensus 161 -------------~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~-~~~~~~~-~~~~~~~~~~~~~--g~-----~l~~~~ 218 (391)
T 1l0q_A 161 -------------KGIAVTPDGTKVYVANFDSMSISVIDTVTN-SVIDTVK-VEAAPSGIAVNPE--GT-----KAYVTN 218 (391)
T ss_dssp -------------EEEEECTTSSEEEEEETTTTEEEEEETTTT-EEEEEEE-CSSEEEEEEECTT--SS-----EEEEEE
T ss_pred -------------ceEEECCCCCEEEEEeCCCCEEEEEECCCC-eEEEEEe-cCCCccceEECCC--CC-----EEEEEe
Confidence 689999999887 57788999999999876 4444443 4567788899988 33 677666
Q ss_pred ---ccCc-ccCCCC-CccccccccccCeEEEEEccCCCeEE-Eec-CCceEEEeC
Q 014644 374 ---YRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNLIA-CAN-GNSLFFHYA 421 (421)
Q Consensus 374 ---~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~la-~~~-~~~~~i~~~ 421 (421)
.++. ++|+.. ............+.+++|+|+++.|+ +++ ++.+++|+.
T Consensus 219 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 219 VDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 5666 899432 22222333344688999999999874 545 667999974
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=4.1e-27 Score=205.02 Aligned_cols=245 Identities=8% Similarity=0.037 Sum_probs=168.0
Q ss_pred CceeeeccccccCCCcccccc-----------cc--ccccEEEEEEEEcCC----CCeEEEEeCCCcEEEeecCCceeEE
Q 014644 9 PEYRYKTEFQSHEPEFDYLKS-----------LE--IEEKINRVRWCAAPN----GSMFILSTNDKTIKLWKVRDQKVKK 71 (421)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----------~~--h~~~V~~v~~~~~~~----~~~l~t~s~d~~v~lwd~~~~~~~~ 71 (421)
-+|+.+...+.|+.....+.. +| +...|++++| +|+ +..+++++.+ +++|++.++++..
T Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~--spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ 149 (356)
T 2w18_A 74 WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC--SSDDESEKQVLLKSGNI--KAVLGLTKRRLVS 149 (356)
T ss_dssp SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--------CCEEEEEEEEE--EEEEEETTTEEEE
T ss_pred ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE--CCCccccccEEEeCCCe--EEEEecCCCcEEE
Confidence 466667777777643322221 12 4568999999 678 8889998854 8899987765322
Q ss_pred eeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecC---
Q 014644 72 IKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS--- 148 (421)
Q Consensus 72 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~--- 148 (421)
.....+ +..+++|++... ++.+..+ .+|...++.++|++
T Consensus 150 ss~~g~-----------------------------------d~~V~~~~~s~d--G~~~~s~-~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 150 SSGTLS-----------------------------------DQQVEVMTFAED--GGGKENQ-FLMPPEETILTFAEVQG 191 (356)
T ss_dssp EESSST-----------------------------------TCEEEEEEECTT--SCEEEEE-EECCCSSCEEEEEEEET
T ss_pred ecccCC-----------------------------------CCcEEEEEECCC--Cceeeee-ccCCCceeeEEeeccCC
Confidence 211111 346788888442 2566666 68999999999999
Q ss_pred CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc---CCCeeEEEEecCCCCeE------------EEEEcCCeE
Q 014644 149 DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL---TEVITSAEFHPIYCNLL------------AYSSSRGFV 212 (421)
Q Consensus 149 ~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~p~~~~~l------------~s~~~d~~v 212 (421)
++++|+++ .|++|+|||++ .+++++++ .+| ...+.+++|+|++ .++ ++|+.|++|
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~-TGk~l~tL-------~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLK-TGQLLKKM-------HIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp STTEEEEEETTSEEEEEETT-TCCEEEEE-------ECCC---CCCEEEEEEETT-EEEEEEC------------CCEEE
T ss_pred CCceEEEecCCCcEEEEECC-CCcEEEEE-------cCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEE
Confidence 78999998 99999999999 66777665 332 3467788999998 765 668899999
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCc
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHL 291 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~ 291 (421)
++||..++... ..+.. .. ..+|...+.+..++ +.++++++. ++|+|||+.+ ++.+.++.+|...
T Consensus 263 klWd~~tgk~l----~v~~~-~~-------p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~ 327 (356)
T 2w18_A 263 IVINPKTTLSV----GVMLY-CL-------PPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQ 327 (356)
T ss_dssp EEEETTTTEEE----EEEEE-CC-------CTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT-CSEEEEECCC--C
T ss_pred EEEECCCCEEE----EEEEe-ec-------cCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCC
Confidence 99999987643 11110 00 01223333333443 778999875 9999999997 9999999888764
Q ss_pred ccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 292 RPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
+ +..++|+|||++|++|+.|++|+|||+
T Consensus 328 v--------------vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 H--------------WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp C--------------CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred e--------------EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 3 035899999999999999999999996
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-27 Score=213.60 Aligned_cols=257 Identities=9% Similarity=0.005 Sum_probs=182.2
Q ss_pred CCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC--------c
Q 014644 100 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEIS--------D 170 (421)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~--------~ 170 (421)
.+...+++|+. ++.+++|++.++ +++..+ . ...|.++.|+|+ ++++ .|++|++|+.... .
T Consensus 46 ~d~~~l~sg~~--Dg~v~iwd~~~~---~~~~~~-~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 46 YDKWVCMCRCE--DGALHFTQLKDS---KTITTI-T--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp EEEEEEEEEEE--TTEEEEEEESSS---SCEEEE-E--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred CCCCEEEEECC--CCcEEEEECCCC---cEEEEE-e--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence 34556666665 678999999887 666666 2 567889999988 8888 9999999987621 1
Q ss_pred eeeeeeecCCCCCCccCCCeeEEEEec--CCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccccc
Q 014644 171 QCFNIVDMKPSNMDDLTEVITSAEFHP--IYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIA 248 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~ 248 (421)
+.++.. ..+|...|.+++|+| ++ .++++++.|++|++||+++++.. ..... .+..
T Consensus 115 ~~~~~~------~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~----~~~~~------------~~~~ 171 (343)
T 3lrv_A 115 KVLREI------EVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQY----IVHSA------------KSDV 171 (343)
T ss_dssp CEEEEE------ECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEE----EEECC------------CSSC
T ss_pred ceeEEe------ecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEE----EEEec------------CCCC
Confidence 111111 135668899999999 98 99999999999999999987642 22211 1245
Q ss_pred ceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcce-eEEee-ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC
Q 014644 249 SISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPV-ATFKI-HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS 325 (421)
Q Consensus 249 ~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d 325 (421)
.+.+++|+|+|.+|++|+. +.|++||+++ ++.+ ..+.. |...+ .+++|+|++.+|++++ |
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v---------------~~l~fs~~g~~l~s~~-~ 234 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKI---------------KEVKFADNGYWMVVEC-D 234 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCE---------------EEEEECTTSSEEEEEE-S
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCE---------------EEEEEeCCCCEEEEEe-C
Confidence 7999999999999999865 9999999997 6655 67777 77654 8999999999999999 4
Q ss_pred CeEEEEecCCCCCceeEEe---cCCCCcc--ceeeecCCcccccccceeeeecc-cCc-ccCCC--CCccccccccccCe
Q 014644 326 NLLRIFSHGVGSAGGITVE---AGKNENR--KPILQAAPRARRSSLSNLTRGLY-RQA-HENSS--SGHHELSYNLSSKL 396 (421)
Q Consensus 326 g~i~iwd~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~-d~~-~iw~~--~~~~~~~~~~~~~v 396 (421)
+.|++||+++.. ....+. .|...+. .++|+|+ +. +|++++. ++. ++|.. ....... ..+
T Consensus 235 ~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--g~-----~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~ 302 (343)
T 3lrv_A 235 QTVVCFDLRKDV-GTLAYPTYTIPEFKTGTVTYDIDDS--GK-----NMIAYSNESNSLTIYKFDKKTKNWTK----DEE 302 (343)
T ss_dssp SBEEEEETTSST-TCBSSCCCBC-----CCEEEEECTT--SS-----EEEEEETTTTEEEEEEECTTTCSEEE----EEE
T ss_pred CeEEEEEcCCCC-cceeecccccccccccceEEEECCC--CC-----EEEEecCCCCcEEEEEEcccccceEe----cCc
Confidence 599999999873 333333 3445555 4889888 43 8888877 777 99933 2211111 456
Q ss_pred EEEEEcc---CCCeEEEec-CCceEEE
Q 014644 397 LHLAWHP---TTNLIACAN-GNSLFFH 419 (421)
Q Consensus 397 ~~~~~sp---d~~~la~~~-~~~~~i~ 419 (421)
..++|+| +.+.|++++ ++.+.++
T Consensus 303 ~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 303 SALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EECCC----CCCCEEEEEEETTEEEEE
T ss_pred eeEecCccccccceeEEEecCCceEEE
Confidence 6778888 777777776 4445544
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-26 Score=217.91 Aligned_cols=241 Identities=15% Similarity=0.075 Sum_probs=180.3
Q ss_pred cccccEEEEEEEEcCCCCeE-EEEeCCCcEEEeecC--CceeEEeeecCCCCCcccccccccccceeeccCCCCceeeee
Q 014644 31 EIEEKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 107 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l-~t~s~d~~v~lwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (421)
+|.+.|++++| +|++++| ++++.||+|+|||+. +++..
T Consensus 100 ~~~~~v~~~~~--s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~------------------------------------- 140 (450)
T 2vdu_B 100 PIYSYIRNLRL--TSDESRLIACADSDKSLLVFDVDKTSKNVL------------------------------------- 140 (450)
T ss_dssp CCCCCEEEEEE--CTTSSEEEEEEGGGTEEEEEEECSSSSSCE-------------------------------------
T ss_pred ccCCceEEEEE--cCCCCEEEEEECCCCeEEEEECcCCCCcee-------------------------------------
Confidence 56778999999 7999986 899999999999998 54311
Q ss_pred cccccccceeEEeecccceeeeeeeec-CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeee-eeecCCCCCC
Q 014644 108 LEWTENMATKIANVGNSVHARCQKVYP-HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFN-IVDMKPSNMD 184 (421)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~-~~~~~~~~~~ 184 (421)
+.+. ..|...|.+++|+|++++|+++ .++.|++|++.. ..... .. ..+.
T Consensus 141 -----------------------~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~-~~~~~~~~----~~~~ 192 (450)
T 2vdu_B 141 -----------------------KLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINS-IPEEKFTQ----EPIL 192 (450)
T ss_dssp -----------------------EEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CCCSSCCC----CCSE
T ss_pred -----------------------eeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCC-cccccccc----eeee
Confidence 1110 2567889999999999999999 999999999983 33221 11 1347
Q ss_pred ccCCCeeEEEEecC---CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCE
Q 014644 185 DLTEVITSAEFHPI---YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 261 (421)
Q Consensus 185 ~~~~~v~~~~~~p~---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (421)
+|...|.+++|+|+ + .+|++++.|+.|++||++++... ..+ +.+|...|.+++|+ ++++
T Consensus 193 ~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~~----~~~------------~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 193 GHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFIV----DKW------------LFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp ECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTCE----EEE------------CCCCSSCEEEEEEC-STTE
T ss_pred cccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCcee----eee------------ecCCCCceEEEEEC-CCCE
Confidence 79999999999999 8 89999999999999999876533 211 12347899999999 9999
Q ss_pred EEEecC-CeEEEEECCCCCcceeEEeeccCccccccc----------ccCCCcceeeeEEEEcCCCCEEEEee-CCCeEE
Q 014644 262 LLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCD----------LYNNDSIFDKFECSVSGDGLHFATGS-YSNLLR 329 (421)
Q Consensus 262 l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~ 329 (421)
|++++. +.|++||+++ ++.+..+..+......... ......-..+.+++|+|++++|++++ .|+.|+
T Consensus 255 l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 999876 9999999987 7877777644311000000 00001112347899999999999999 899999
Q ss_pred EEec--CCCC--CceeEEecCCCCccceeeecC
Q 014644 330 IFSH--GVGS--AGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 330 iwd~--~~~~--~~~~~~~~~~~~~~~~~~~~~ 358 (421)
+|++ .++. .....+..| ..+..++|+|+
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~ 365 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP-YNVISLSAHND 365 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS-SCEEEEEEETT
T ss_pred EEEeccCCCCceeeccEeccC-CceEEEEecCC
Confidence 9999 4332 335567777 88999999986
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=7.8e-27 Score=212.60 Aligned_cols=245 Identities=13% Similarity=0.140 Sum_probs=186.4
Q ss_pred eeeeeecCCCCcceEEEeecCC---CCEEEEE-cCCcEEEEeCCCCceee-eeeecCCCCCCccCCCeeEEEEecCCCCe
Q 014644 128 RCQKVYPHAHDFNINSISNNSD---CETFVSA-DDLRINLWNLEISDQCF-NIVDMKPSNMDDLTEVITSAEFHPIYCNL 202 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~-~d~~i~lwd~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 202 (421)
+.++.+ .+|.+.|++++|+|+ |++|++| .|+.|++||+...+... ..+ .+|...|.+++|+|++ .+
T Consensus 30 ~~~~~~-~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~-~~ 100 (368)
T 3mmy_A 30 KDIEVT-SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ-------QMHTGPVLDVCWSDDG-SK 100 (368)
T ss_dssp CCEECS-SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE-------EECSSCEEEEEECTTS-SE
T ss_pred ceeEec-cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe-------ccccCCEEEEEECcCC-CE
Confidence 555666 899999999999999 6999999 99999999998534443 333 6799999999999999 99
Q ss_pred EEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEE--cCCCCEEEEecC-CeEEEEECCCCC
Q 014644 203 LAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF--ANDGQHLLSRDY-MNLKLWDIRMDS 279 (421)
Q Consensus 203 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~-~~i~i~d~~~~~ 279 (421)
|++++.||.|++||+.+++.. . +. .|...|.+++| +|++++|++++. +.|++||+++ +
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~----~-~~-------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~ 161 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAI----Q-IA-------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS-S 161 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEE----E-EE-------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC-S
T ss_pred EEEEcCCCcEEEEEcCCCCce----e-ec-------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC-C
Confidence 999999999999999987643 2 22 24789999999 899999999875 9999999987 7
Q ss_pred cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe-cCCCCccceeeecC
Q 014644 280 TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE-AGKNENRKPILQAA 358 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 358 (421)
+.+..+..+... .++.+. +..+++++.++.+++|++.........+. .+......+.+.+.
T Consensus 162 ~~~~~~~~~~~~----------------~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (368)
T 3mmy_A 162 NPMMVLQLPERC----------------YCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKD 223 (368)
T ss_dssp SCSEEEECSSCE----------------EEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEEC
T ss_pred cEEEEEecCCCc----------------eEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEccc
Confidence 888888766532 344444 45888999999999999987643333322 23344555555554
Q ss_pred CcccccccceeeeecccCc-ccCCCCC-----cccccccccc------------CeEEEEEccCCCeEEEec-CCceEEE
Q 014644 359 PRARRSSLSNLTRGLYRQA-HENSSSG-----HHELSYNLSS------------KLLHLAWHPTTNLIACAN-GNSLFFH 419 (421)
Q Consensus 359 ~~~~~~~~~~l~~g~~d~~-~iw~~~~-----~~~~~~~~~~------------~v~~~~~spd~~~la~~~-~~~~~i~ 419 (421)
.... ...+++++.|+. ++|.... .......|.. .|++++|+|++++|++++ ++.|++|
T Consensus 224 ~~~~---~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iw 300 (368)
T 3mmy_A 224 KQNK---PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW 300 (368)
T ss_dssp TTSC---EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred CCCC---CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEE
Confidence 2211 224999999999 9993332 2333445544 799999999999999998 5669999
Q ss_pred eC
Q 014644 420 YA 421 (421)
Q Consensus 420 ~~ 421 (421)
+.
T Consensus 301 d~ 302 (368)
T 3mmy_A 301 DK 302 (368)
T ss_dssp ET
T ss_pred EC
Confidence 74
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=4.2e-25 Score=203.28 Aligned_cols=314 Identities=10% Similarity=0.065 Sum_probs=212.3
Q ss_pred cccccccccEEEEEEEEcCCCCeE-EEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 27 LKSLEIEEKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 27 ~~~~~h~~~V~~v~~~~~~~~~~l-~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
+..+.+...+.+++| +++++++ ++++.|++|++||+.+++...... .+..+. ++.+++++..+
T Consensus 25 ~~~~~~~~~~~~~~~--s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~------------~~~~spdg~~l 88 (391)
T 1l0q_A 25 TATIPVGSNPMGAVI--SPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AGSSPQ------------GVAVSPDGKQV 88 (391)
T ss_dssp EEEEECSSSEEEEEE--CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CSSSEE------------EEEECTTSSEE
T ss_pred EEEeecCCCcceEEE--CCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CCCCcc------------ceEECCCCCEE
Confidence 344555667999999 7898876 677799999999999887443322 222333 44444555444
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEE-EEE-cCCcEEEEeCCCCceeeeeeecCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
..+.. ..+.+++|+..+. +.+..+ .. ...+.+++|+|+++.| +++ .++.|++||+. .++....+
T Consensus 89 ~~~~~-~~~~v~v~d~~~~---~~~~~~-~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~-~~~~~~~~------- 154 (391)
T 1l0q_A 89 YVTNM-ASSTLSVIDTTSN---TVAGTV-KT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTV-TKAVINTV------- 154 (391)
T ss_dssp EEEET-TTTEEEEEETTTT---EEEEEE-EC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEE-------
T ss_pred EEEEC-CCCEEEEEECCCC---eEEEEE-eC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECC-CCcEEEEE-------
Confidence 32221 1357899999887 666666 33 4568999999999987 567 89999999998 55555544
Q ss_pred CccCCCeeEEEEecCCCCeE-EEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 184 DDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 184 ~~~~~~v~~~~~~p~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
..+ ..+.+++|+|++ +.| ++++.++.|++||+++++.. ..+.. ...+.+++|+|+|+++
T Consensus 155 ~~~-~~~~~~~~~~dg-~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~--------------~~~~~~~~~~~~g~~l 214 (391)
T 1l0q_A 155 SVG-RSPKGIAVTPDG-TKVYVANFDSMSISVIDTVTNSVI----DTVKV--------------EAAPSGIAVNPEGTKA 214 (391)
T ss_dssp ECC-SSEEEEEECTTS-SEEEEEETTTTEEEEEETTTTEEE----EEEEC--------------SSEEEEEEECTTSSEE
T ss_pred ecC-CCcceEEECCCC-CEEEEEeCCCCEEEEEECCCCeEE----EEEec--------------CCCccceEECCCCCEE
Confidence 223 457999999999 666 67778999999999887543 22222 4578899999999988
Q ss_pred EEec---C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEE-EEeeCCCeEEEEecCCCC
Q 014644 263 LSRD---Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF-ATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 263 ~~~~---~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~~s~dg~i~iwd~~~~~ 337 (421)
++++ . +.|++||+++ ++.+..+..+... .+++|+|++++| ++++.|+.|++||+.++
T Consensus 215 ~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~- 276 (391)
T 1l0q_A 215 YVTNVDKYFNTVSMIDTGT-NKITARIPVGPDP----------------AGIAVTPDGKKVYVALSFXNTVSVIDTATN- 276 (391)
T ss_dssp EEEEECSSCCEEEEEETTT-TEEEEEEECCSSE----------------EEEEECTTSSEEEEEETTTTEEEEEETTTT-
T ss_pred EEEecCcCCCcEEEEECCC-CeEEEEEecCCCc----------------cEEEEccCCCEEEEEcCCCCEEEEEECCCC-
Confidence 8764 4 9999999986 7777777765543 589999999987 57788999999999987
Q ss_pred CceeEEecCCCCcc---cee------------eecCCccccccc---ceeeeecccCc-ccCCCCCccccccccccCeEE
Q 014644 338 AGGITVEAGKNENR---KPI------------LQAAPRARRSSL---SNLTRGLYRQA-HENSSSGHHELSYNLSSKLLH 398 (421)
Q Consensus 338 ~~~~~~~~~~~~~~---~~~------------~~~~~~~~~~~~---~~l~~g~~d~~-~iw~~~~~~~~~~~~~~~v~~ 398 (421)
.....+..|..+.. .+. |..+......+. -.+...+.+.. ++|+.+..... .+.. ..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~--~~~~--~~ 352 (391)
T 1l0q_A 277 TITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS--KKQN--PT 352 (391)
T ss_dssp EEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE--CSSS--CE
T ss_pred cEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc--CcCC--Ce
Confidence 56666666655432 112 221100000000 23555566666 88844322211 1112 24
Q ss_pred EEEccCCCeEEEec
Q 014644 399 LAWHPTTNLIACAN 412 (421)
Q Consensus 399 ~~~spd~~~la~~~ 412 (421)
..|+|+|.+.+...
T Consensus 353 ~~~~~~g~y~~~~~ 366 (391)
T 1l0q_A 353 HTYSETGIYTVRLT 366 (391)
T ss_dssp ECCSSCEEEEEEEE
T ss_pred EEeCCCceEEEEEE
Confidence 67899988876543
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=6e-26 Score=204.91 Aligned_cols=223 Identities=12% Similarity=0.096 Sum_probs=167.6
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+|...|++++|++..++.+|++++.|++|++||+.+++... ..
T Consensus 55 ~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~------~~------------------------------- 97 (351)
T 3f3f_A 55 AHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEEC------SG------------------------------- 97 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTT------SS-------------------------------
T ss_pred cCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccc------cc-------------------------------
Confidence 68999999999432268999999999999999998764100 00
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCceeeeeee------cCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVD------MKPS 181 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~~~~~~~~------~~~~ 181 (421)
...+++..+ .+|...|.+++|+|+ +++|+++ .|+.|++||++.. +....+. ....
T Consensus 98 --------------~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 98 --------------RRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP-SDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp --------------CSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST-TCTTCCEEEEEEESCSC
T ss_pred --------------cCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh-HHhcccccccccccccc
Confidence 001444555 789999999999999 9999998 9999999999843 3222111 1111
Q ss_pred CCCccCCCeeEEEEecC---CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC
Q 014644 182 NMDDLTEVITSAEFHPI---YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND 258 (421)
Q Consensus 182 ~~~~~~~~v~~~~~~p~---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (421)
....|...+.+++|+|+ + ..+++++.|+.+.+|+...+... .... +.+|...|.+++|+|+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~-~~l~~~~~~~~~~~~~~~~~~~~--~~~~-------------~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSP-EKLAVSALEQAIIYQRGKDGKLH--VAAK-------------LPGHKSLIRSISWAPS 225 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSC-CEEEEEETTEEEEEEECTTSCEE--EEEE-------------CCCCCSCEEEEEECCC
T ss_pred ccCCcccceeEEEeccCCCCC-cEEEEecCCCcEEEEccCCCcee--eeee-------------cCCCCcceeEEEECCC
Confidence 22467889999999997 6 89999999999988887765421 0122 2345889999999999
Q ss_pred C----CEEEEecC-CeEEEEECCCCC---------------------------------------------cceeEEeec
Q 014644 259 G----QHLLSRDY-MNLKLWDIRMDS---------------------------------------------TPVATFKIH 288 (421)
Q Consensus 259 ~----~~l~~~~~-~~i~i~d~~~~~---------------------------------------------~~~~~~~~~ 288 (421)
+ ++|++++. +.|++||++... +.+..+.+|
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 78998876 999999997521 233344444
Q ss_pred cCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC
Q 014644 289 EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
...+ .+++|+|++++|++++.||.|++|++.+++
T Consensus 306 ~~~v---------------~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 306 NGEV---------------WSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSCE---------------EEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccE---------------EEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 4433 899999999999999999999999999873
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.6e-26 Score=213.11 Aligned_cols=213 Identities=17% Similarity=0.260 Sum_probs=165.3
Q ss_pred ccccccEEEEEEEEcCCCC-eEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeec
Q 014644 30 LEIEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHL 108 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~-~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g 108 (421)
.+|...|.+++| ++++. +|++|+.||+|++||+.++.....
T Consensus 178 ~~h~~~v~~l~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~------------------------------------ 219 (430)
T 2xyi_A 178 RGHQKEGYGLSW--NPNLNGYLLSASDDHTICLWDINATPKEHR------------------------------------ 219 (430)
T ss_dssp ECCSSCCCCEEE--CTTSTTEEEEECTTSCEEEEETTSCCBGGG------------------------------------
T ss_pred cCCCCCeEEEEe--CCCCCCeEEEEeCCCeEEEEeCCCCCCCCc------------------------------------
Confidence 378999999999 67777 999999999999999987431000
Q ss_pred ccccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCc--eeeeeeecCCCCCC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DDLRINLWNLEISD--QCFNIVDMKPSNMD 184 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~--~~~~~~~~~~~~~~ 184 (421)
.......+ .+|...|.+++|+| ++.+|+++ .|+.|++||++... .....+ .
T Consensus 220 -----------------~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-------~ 274 (430)
T 2xyi_A 220 -----------------VIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-------D 274 (430)
T ss_dssp -----------------EEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-------E
T ss_pred -----------------eeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-------e
Confidence 00223344 68999999999999 67888888 99999999998442 233332 5
Q ss_pred ccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC-EEE
Q 014644 185 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ-HLL 263 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 263 (421)
.|...|.+++|+|++..+|++++.||.|++||++..... ...+.. |...|.+++|+|+++ +|+
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~---~~~~~~-------------h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---LHSFES-------------HKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---SEEEEC-------------CSSCEEEEEECSSCTTEEE
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC---eEEeec-------------CCCCEEEEEECCCCCCEEE
Confidence 788999999999998557999999999999999874321 233333 478999999999986 577
Q ss_pred EecC-CeEEEEECCCCC-------------cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEeeCCCeE
Q 014644 264 SRDY-MNLKLWDIRMDS-------------TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGSYSNLL 328 (421)
Q Consensus 264 ~~~~-~~i~i~d~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s~dg~i 328 (421)
+++. +.|++||+...+ +.+..+.+|...+ .+++|+|+++ +|++++.||.|
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v---------------~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI---------------SDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE---------------EEEEECSSSTTEEEEEETTSEE
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc---------------eEEEECCCCCCEEEEEECCCCE
Confidence 7755 999999997522 3444455555543 7999999998 89999999999
Q ss_pred EEEecCCC
Q 014644 329 RIFSHGVG 336 (421)
Q Consensus 329 ~iwd~~~~ 336 (421)
+||++...
T Consensus 404 ~iw~~~~~ 411 (430)
T 2xyi_A 404 QVWQMAEN 411 (430)
T ss_dssp EEEEECHH
T ss_pred EEeEcccc
Confidence 99998754
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=7.3e-26 Score=205.42 Aligned_cols=235 Identities=8% Similarity=-0.008 Sum_probs=170.3
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeE-EEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLL-AYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~ 206 (421)
+++..+ ..|...|++++|+|||++|++|.+..+++|++. ........ +...+..+++.+++ +.+ +++
T Consensus 10 ~~~~~~-~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~-~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~ 77 (355)
T 3vu4_A 10 NPIVPE-NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVH-PVAHIMSQ---------EMRHLSKVRMLHRT-NYVAFVT 77 (355)
T ss_dssp ----------CCCCCEEEECTTSSEEEEECSSEEEEEEET-TEEEEEEE---------ECSCCCEEEECTTS-SEEEEEC
T ss_pred CCcccc-ccCCCceEEEEECCCCCEEEEEcCCEEEEEecC-Ccceeeee---------ecCCeEEEEEcCCC-CEEEEEE
Confidence 555555 789999999999999999999944458999988 33333221 22247888899987 655 567
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEe
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFK 286 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~ 286 (421)
+.|++|++||+.+++.. ..+.. ...|.+++|+++. ++++.++.|++||+.+..+.+..+.
T Consensus 78 ~~d~~v~iWd~~~~~~~----~~~~~--------------~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~ 137 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDV----SRIKV--------------DAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDI 137 (355)
T ss_dssp SSTTEEEEEETTTTEEE----EEEEC--------------SSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCE
T ss_pred CCccEEEEEECCCCcEE----EEEEC--------------CCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEec
Confidence 78899999999987644 22222 5689999999764 5555568999999986325555554
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEE--eeCCCeEEEEecCCCCC---------------ceeEEecCCCC
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT--GSYSNLLRIFSHGVGSA---------------GGITVEAGKNE 349 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~--~s~dg~i~iwd~~~~~~---------------~~~~~~~~~~~ 349 (421)
. .. ..+++++ .+++. |+.||.|++||+.++.. ....+.+|..+
T Consensus 138 ~-~~-----------------~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~ 197 (355)
T 3vu4_A 138 R-FG-----------------GVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP 197 (355)
T ss_dssp E-EE-----------------EEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC
T ss_pred c-CC-----------------ceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc
Confidence 4 11 3466777 55655 68899999999997630 16788999999
Q ss_pred ccceeeecCCcccccccceeeeecccCc--ccC--CCCCcccccc-c-cccCeEEEEEccCCCeEEEec-CCceEEEeC
Q 014644 350 NRKPILQAAPRARRSSLSNLTRGLYRQA--HEN--SSSGHHELSY-N-LSSKLLHLAWHPTTNLIACAN-GNSLFFHYA 421 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~g~~d~~--~iw--~~~~~~~~~~-~-~~~~v~~~~~spd~~~la~~~-~~~~~i~~~ 421 (421)
|.+++|+|+ + .+|++|+.|+. ++| ..++.+.... + |...|.+++|+||+++||+++ ++.+++|+.
T Consensus 198 v~~~~~s~~--g-----~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 198 IKMVRLNRK--S-----DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEEECTT--S-----SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred eEEEEECCC--C-----CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 999999998 3 48999999994 999 3345555555 4 899999999999999999998 456999973
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.9e-25 Score=206.77 Aligned_cols=312 Identities=12% Similarity=0.088 Sum_probs=207.6
Q ss_pred cccEEEEEEEEcCCC-CeEEEEe----CCC----cEEEeec--CCceeE-EeeecCCCCCcccccccccccceeeccC--
Q 014644 33 EEKINRVRWCAAPNG-SMFILST----NDK----TIKLWKV--RDQKVK-KIKEMDHFPFVSSENTLLAEKNFMNEHN-- 98 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~-~~l~t~s----~d~----~v~lwd~--~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~-- 98 (421)
...++...| .+.+ .++++|+ .|| +|+|||+ .+++.. ......+...+..+++...+........
T Consensus 62 ~~~~~~~~w--~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAW--SALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHH--HTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHH--HhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 346777888 4554 5676876 467 9999999 777622 2222234444544444321110000000
Q ss_pred CCCceeeeecccc-cc---cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCC---cEEEEeCCCCc
Q 014644 99 PPSFAHGYHLEWT-EN---MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDL---RINLWNLEISD 170 (421)
Q Consensus 99 ~~~~~~~~~g~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~---~i~lwd~~~~~ 170 (421)
......++..+.. .+ ..+++|+.+. ...+.+ .+|...|.+++|+|||+.|+++ .++ .|++||+. ++
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g----~~~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~-tg 213 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDG----YNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA-NG 213 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTS----CSCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TC
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCC----CCCEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC-CC
Confidence 0012222222221 12 5789999864 345556 6789999999999999999997 664 99999998 44
Q ss_pred eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE-EEEcCC--eEEEEECCcccccccchhhhccccccCCCcccccccc
Q 014644 171 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA-YSSSRG--FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 247 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-s~~~d~--~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 247 (421)
+.... ..|...+.+++|+|+| +.|+ +++.++ .|++||+.+++.. .+.. |.
T Consensus 214 ~~~~l--------~~~~~~~~~~~~spdg-~~la~~~~~~g~~~i~~~d~~~~~~~-----~l~~-------------~~ 266 (415)
T 2hqs_A 214 AVRQV--------ASFPRHNGAPAFSPDG-SKLAFALSKTGSLNLYVMDLASGQIR-----QVTD-------------GR 266 (415)
T ss_dssp CEEEE--------ECCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-----ECCC-------------CS
T ss_pred cEEEe--------ecCCCcccCEEEcCCC-CEEEEEEecCCCceEEEEECCCCCEE-----eCcC-------------CC
Confidence 44432 4567789999999999 7666 666655 4999999876531 2222 35
Q ss_pred cceeEEEEcCCCCEEEEecC--C--eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee
Q 014644 248 ASISDIKFANDGQHLLSRDY--M--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 323 (421)
Q Consensus 248 ~~v~~~~~s~~~~~l~~~~~--~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s 323 (421)
..+..++|+|||++|+++++ + .|++||+.+ ++. ..+..+...+ .+++|+|+|++|++++
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~~-~~l~~~~~~~---------------~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GAP-QRITWEGSQN---------------QDADVSSDGKFMVMVS 329 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCC-EECCCSSSEE---------------EEEEECTTSSEEEEEE
T ss_pred CcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CCE-EEEecCCCcc---------------cCeEECCCCCEEEEEE
Confidence 67899999999999887653 4 677888875 443 3333333322 6899999999999887
Q ss_pred CC---CeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc----ccCC-CCCccccccccccC
Q 014644 324 YS---NLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA----HENS-SSGHHELSYNLSSK 395 (421)
Q Consensus 324 ~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~----~iw~-~~~~~~~~~~~~~~ 395 (421)
.+ ..|++||+.++. . ..+..+. .+..+.|+|+ ++ .|+.++.++. .+|+ .++....+..+...
T Consensus 330 ~~~g~~~i~~~d~~~~~-~-~~l~~~~-~~~~~~~spd--g~-----~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~ 399 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGG-V-QVLSSTF-LDETPSLAPN--GT-----MVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ 399 (415)
T ss_dssp ECSSCEEEEEEETTTCC-E-EECCCSS-SCEEEEECTT--SS-----EEEEEEEETTEEEEEEEETTSCCEEECCCSSSE
T ss_pred CcCCceEEEEEECCCCC-E-EEecCCC-CcCCeEEcCC--CC-----EEEEEEcCCCccEEEEEECCCCcEEEeeCCCCC
Confidence 64 589999999763 2 4455554 8889999998 44 7777776663 4553 34556666788899
Q ss_pred eEEEEEccCCC
Q 014644 396 LLHLAWHPTTN 406 (421)
Q Consensus 396 v~~~~~spd~~ 406 (421)
|.+++|+|.-.
T Consensus 400 v~~~~~~~~~~ 410 (415)
T 2hqs_A 400 VKFPAWSPYLH 410 (415)
T ss_dssp EEEEEECCCCC
T ss_pred CcCCccccccc
Confidence 99999999754
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=7.9e-25 Score=218.32 Aligned_cols=335 Identities=9% Similarity=0.029 Sum_probs=224.9
Q ss_pred cccEEEEEEEEcCCCCeEEEEeC-CC-----cEEEeecCCceeEEeeecCCCCC---ccccc-------cc-ccccceee
Q 014644 33 EEKINRVRWCAAPNGSMFILSTN-DK-----TIKLWKVRDQKVKKIKEMDHFPF---VSSEN-------TL-LAEKNFMN 95 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~-d~-----~v~lwd~~~~~~~~~~~~~~~~~---v~~~~-------~~-~~~~~~~~ 95 (421)
...|.+++| +|||++|++++. |+ +|++||+.+++...+...+...+ ..+.. .. .....+..
T Consensus 36 ~~~~~~~~~--SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKV--APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEE--CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceE--ecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 457899999 899999999998 88 99999999987554443221110 00000 00 00022556
Q ss_pred ccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeee
Q 014644 96 EHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNI 175 (421)
Q Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~ 175 (421)
+.+++++.+++.++. ..+.+|++...... ..+.+ ..|...+..++|+|||++|+.+.++.|++||+. +++..++
T Consensus 114 ~~~SpDg~~l~~~~~---~~i~~~d~~~~~~~-~~~~l-~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~-~g~~~~~ 187 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG---GELYLYDLKQEGKA-AVRQL-THGEGFATDAKLSPKGGFVSFIRGRNLWVIDLA-SGRQMQL 187 (741)
T ss_dssp CEECTTSSEEEEEET---TEEEEEESSSCSTT-SCCBC-CCSSSCEEEEEECTTSSEEEEEETTEEEEEETT-TTEEEEC
T ss_pred eEECCCCCEEEEEeC---CcEEEEECCCCCcc-eEEEc-ccCCcccccccCCCCCCEEEEEeCCcEEEEecC-CCCEEEe
Confidence 677777777766553 67889998764100 33445 678888999999999999999866799999998 4544433
Q ss_pred eecCCCCCCccCC----------------CeeEEEEecCCCCeEEEEEcCC-----------------------------
Q 014644 176 VDMKPSNMDDLTE----------------VITSAEFHPIYCNLLAYSSSRG----------------------------- 210 (421)
Q Consensus 176 ~~~~~~~~~~~~~----------------~v~~~~~~p~~~~~l~s~~~d~----------------------------- 210 (421)
. ..+.. .+.+++|+||| +.|++++.|+
T Consensus 188 ~-------~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 188 T-------ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp C-------CCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred c-------cCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 2 11222 24789999999 8888887765
Q ss_pred ----eEEEEECCc-ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-----C-CeEEEEECCCCC
Q 014644 211 ----FVRLVDMRQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-----Y-MNLKLWDIRMDS 279 (421)
Q Consensus 211 ----~v~iwd~~~-~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~-~~i~i~d~~~~~ 279 (421)
.|.+||+.+ ++.. ..... ..+...+..++| |||++|+.+. . ..|++||+.+ +
T Consensus 260 ~~~~~l~~~d~~~~~~~~----~~~~~-----------~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g 322 (741)
T 2ecf_A 260 NVQVKLGVISPAEQAQTQ----WIDLG-----------KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-N 322 (741)
T ss_dssp CCEEEEEEECSSTTCCCE----EECCC-----------SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-C
T ss_pred CCeeEEEEEECCCCCceE----EecCC-----------CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-C
Confidence 788888877 6432 11100 123568899999 9999998642 2 6799999986 6
Q ss_pred cceeEEeeccCc-ccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccce-eeec
Q 014644 280 TPVATFKIHEHL-RPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKP-ILQA 357 (421)
Q Consensus 280 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~ 357 (421)
+....+..+... +. .+.+++|+|||+++++++.||.++||.++..+. ...+..+...+..+ .|++
T Consensus 323 ~~~~~~~~~~~~~~~------------~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 323 QQRVLAHETSPTWVP------------LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDE 389 (741)
T ss_dssp CEEEEEEEECSSCCC------------CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEET
T ss_pred ceEEEEEcCCCCcCC------------cCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeC
Confidence 666665554421 00 014789999999999999999888888764334 67777787777776 4888
Q ss_pred CCcccccccceeeeecccC--c-ccCC--C-CCccccccccccCeEEEEEccCCCeEEEecC-----CceEEEe
Q 014644 358 APRARRSSLSNLTRGLYRQ--A-HENS--S-SGHHELSYNLSSKLLHLAWHPTTNLIACANG-----NSLFFHY 420 (421)
Q Consensus 358 ~~~~~~~~~~~l~~g~~d~--~-~iw~--~-~~~~~~~~~~~~~v~~~~~spd~~~la~~~~-----~~~~i~~ 420 (421)
+ ++ ..+++++.++ . ++|. . ++....+.. ...+..++|+||++.|+.... ..+++++
T Consensus 390 d--g~----~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 390 K--AG----LAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp T--TT----EEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred C--CC----EEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 8 33 1335556565 5 8992 2 332333333 567889999999999887652 2466664
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.4e-23 Score=200.17 Aligned_cols=319 Identities=8% Similarity=-0.002 Sum_probs=225.6
Q ss_pred cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEee--
Q 014644 44 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANV-- 121 (421)
Q Consensus 44 ~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 121 (421)
++++.++++++.|++|.+||..++++.......+ .+..+.+++++.++..++.+ ..+.+||+
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--------------~~~~v~~spdg~~l~v~~~d--~~V~v~D~~~ 209 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--------------AVHISRMSASGRYLLVIGRD--ARIDMIDLWA 209 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--------------TEEEEEECTTSCEEEEEETT--SEEEEEETTS
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--------------ccceEEECCCCCEEEEECCC--CeEEEEECcC
Confidence 6788899999999999999999887432222111 14456667788777777664 78999999
Q ss_pred cccceeeeeeeecCCCCcceEEEeecC----CCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCC---ccCC-Cee
Q 014644 122 GNSVHARCQKVYPHAHDFNINSISNNS----DCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMD---DLTE-VIT 191 (421)
Q Consensus 122 ~~~~~~~~~~~~~~~h~~~v~~l~~~~----~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~---~~~~-~v~ 191 (421)
.+. +++..+ . +...+..++|+| ||++|+++ .+++|.+||.. ..++++.+........ -|.. .+.
T Consensus 210 ~t~---~~~~~i-~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~-t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 210 KEP---TKVAEI-K-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE-TLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp SSC---EEEEEE-E-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT-TCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred CCC---cEEEEE-e-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc-ccccceeecccCcccCccccccCCceE
Confidence 665 677777 4 455689999999 99999987 58999999998 5666666532110011 1333 789
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-Ce
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MN 269 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~ 269 (421)
++.++|+++.++++...++.|.+||+.+.+... ...+.. ...+..+.|+|+|++++++ .. ++
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~--~~~i~~--------------~~~~~~~~~spdg~~l~va~~~~~~ 347 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT--VTSIGA--------------APFLHDGGWDSSHRYFMTAANNSNK 347 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCE--EEEEEC--------------CSSCCCEEECTTSCEEEEEEGGGTE
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcce--eEEecc--------------CcCccCceECCCCCEEEEEecCCCe
Confidence 999999885677777889999999998754321 011111 3457789999999987765 44 89
Q ss_pred EEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEE-EcCC-CCEEEEee-CCCeEEEEecCCC------CCce
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECS-VSGD-GLHFATGS-YSNLLRIFSHGVG------SAGG 340 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~sp~-~~~l~~~s-~dg~i~iwd~~~~------~~~~ 340 (421)
|.+||+.+ ++++..+.....+-+. .... ++|+ +..+++++ .|++|.+||+.+. .+..
T Consensus 348 v~v~D~~t-g~l~~~i~~g~~ph~g-------------~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v 413 (543)
T 1nir_A 348 VAVIDSKD-RRLSALVDVGKTPHPG-------------RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 413 (543)
T ss_dssp EEEEETTT-TEEEEEEECSSSBCCT-------------TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEECCC-CeEEEeeccCCCCCCC-------------CCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEE
Confidence 99999987 8888777642211000 1222 4677 66667765 5899999999882 2667
Q ss_pred eEEecCCCCccceeeecCCcccccccceeeeec-------ccCc-ccCCC--CCccccc---------cccccCeEEEEE
Q 014644 341 ITVEAGKNENRKPILQAAPRARRSSLSNLTRGL-------YRQA-HENSS--SGHHELS---------YNLSSKLLHLAW 401 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-------~d~~-~iw~~--~~~~~~~---------~~~~~~v~~~~~ 401 (421)
.++.+|...+..+.++|+ ++ .|+++. .++. .+|+. .+..... ..+...+..+.|
T Consensus 414 ~~l~~~g~~~~~v~~~pd--g~-----~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 414 AELQGQGGGSLFIKTHPK--SS-----HLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp EEEECSCSCCCCEECCTT--CC-----EEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred EEEEcCCCCceEEEcCCC--CC-----cEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 889999988899999998 44 787776 2455 88833 2222121 244678999999
Q ss_pred ccCCCeEEEec------CCceEEEeC
Q 014644 402 HPTTNLIACAN------GNSLFFHYA 421 (421)
Q Consensus 402 spd~~~la~~~------~~~~~i~~~ 421 (421)
+|||+.|.++. ++.|.+|+.
T Consensus 487 ~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 487 NKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp CSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred CCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 99999988662 477999974
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.5e-23 Score=195.59 Aligned_cols=237 Identities=10% Similarity=0.032 Sum_probs=178.9
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEEC
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 217 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~ 217 (421)
..+.+++|+|++.+++++ .+++|++||+. .++....+. ...+.+|...|.+++|+|++ .++++++.|+.|++||+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDIN-SGQTVRLSP--PEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETT-TCCEEEECC--CHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEET
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECC-CCeEeeecC--cccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEEC
Confidence 446699999977788888 89999999998 455544321 11235788899999999998 99999999999999999
Q ss_pred CcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE-EecC-CeEEEEECCCCCcceeEEeeccCccccc
Q 014644 218 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL-SRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKL 295 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 295 (421)
++++.. ..+.. |...+.+++|+|++++++ ++.. +.|++||+++ ++.+..+..+...
T Consensus 199 ~~~~~~----~~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~---- 256 (433)
T 3bws_A 199 KTLAYK----ATVDL-------------TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-KLEIRKTDKIGLP---- 256 (433)
T ss_dssp TTCCEE----EEEEC-------------SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEECCCCSEE----
T ss_pred CCceEE----EEEcC-------------CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-CcEEEEecCCCCc----
Confidence 876543 22223 366899999999999885 4544 9999999986 7776666554332
Q ss_pred ccccCCCcceeeeEEEEcCCCCEEEEee--------CCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccc
Q 014644 296 CDLYNNDSIFDKFECSVSGDGLHFATGS--------YSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLS 367 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~sp~~~~l~~~s--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (421)
.+++|+|++++|++++ .||.|++||+.++ .... ...|...+..++|+|+ ++ .
T Consensus 257 ------------~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~--g~----~ 316 (433)
T 3bws_A 257 ------------RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE-KLID-TIGPPGNKRHIVSGNT--EN----K 316 (433)
T ss_dssp ------------EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT-EEEE-EEEEEECEEEEEECSS--TT----E
T ss_pred ------------eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC-cEEe-eccCCCCcceEEECCC--CC----E
Confidence 6899999999999888 5889999999876 3333 3345567788899887 32 2
Q ss_pred eeeeecccCc-ccCCCC-CccccccccccCeEEEEEccCCCeEEEecC----------------CceEEEeC
Q 014644 368 NLTRGLYRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNLIACANG----------------NSLFFHYA 421 (421)
Q Consensus 368 ~l~~g~~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~la~~~~----------------~~~~i~~~ 421 (421)
.+++++.++. ++|+.. ........+...+..++|+|+++.|++++. +.+++|+.
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred EEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 5677788888 999432 333344456778999999999999888874 27999974
No 130
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.8e-23 Score=207.91 Aligned_cols=333 Identities=10% Similarity=0.038 Sum_probs=204.0
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
...+.+++| +|+|+++++ +.||+|++||+.+++...+...+ ... ...+....+++++.+++.+..+.
T Consensus 16 ~~~~~~~~~--spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~-~~~---------~~~v~~~~~SpDg~~l~~~~~~~ 82 (723)
T 1xfd_A 16 KIHDPEAKW--ISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGK-KIE---------SLRAIRYEISPDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCCCB--SSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTT-TTT---------TTTCSEEEECTTSSEEEEEESCC
T ss_pred cccccccEE--cCCCcEEEE-eCCCCEEEEECCCCcEEEEeccc-ccc---------ccccceEEECCCCCEEEEEecCc
Confidence 345678899 789997766 78999999999998754443321 110 01245556666776666554421
Q ss_pred -------ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCC--C
Q 014644 113 -------NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSN--M 183 (421)
Q Consensus 113 -------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~--~ 183 (421)
...+.+|++.++.. +.+... .+|...+..++|||||+.|+.+.++.|++||+. +++..++....... +
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP-QSLDPP-EVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHV-GKQAIRVVSTGKEGVIY 159 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC-EECCCT-TCCSCCCSBCCBCSSTTCEEEEETTEEEEESSS-SSCCEEEECCCBTTTEE
T ss_pred cceeecceeeEEEEECCCCce-EeccCC-ccccccccccEECCCCCEEEEEECCeEEEEECC-CCceEEEecCCCCCceE
Confidence 24688999887621 112222 345556899999999999999856899999998 45444443100000 0
Q ss_pred CccC---------CCeeEEEEecCCCCeEEEEEcCC----------------------------------eEEEEECCcc
Q 014644 184 DDLT---------EVITSAEFHPIYCNLLAYSSSRG----------------------------------FVRLVDMRQS 220 (421)
Q Consensus 184 ~~~~---------~~v~~~~~~p~~~~~l~s~~~d~----------------------------------~v~iwd~~~~ 220 (421)
.++. ..+.+++|+||| +.|++++.|+ .|++||+.++
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred CcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 0010 123789999999 8888887553 6888888765
Q ss_pred cccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec----C-CeEEEEECCCCCcceeEEeec-cCcccc
Q 014644 221 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD----Y-MNLKLWDIRMDSTPVATFKIH-EHLRPK 294 (421)
Q Consensus 221 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~-~~i~i~d~~~~~~~~~~~~~~-~~~~~~ 294 (421)
+.. ..+..+ ..+..+...+..++|+|||++|++.. . ..|++||+.+ ++....+..+ ...+..
T Consensus 239 ~~~----~~l~~~-------~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~ 306 (723)
T 1xfd_A 239 THD----LEMMPP-------DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHR 306 (723)
T ss_dssp CCC----EECCCC-------CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCC
T ss_pred cee----EEeeCC-------ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEec
Confidence 421 111110 00112356789999999999887642 2 5799999986 6665555433 222100
Q ss_pred cccccCCCcceeeeEEEEcCCCCEEEE--eeCCC------eEEEEecCCCCC--ceeEEecCCCCcc-ceeeecCCcccc
Q 014644 295 LCDLYNNDSIFDKFECSVSGDGLHFAT--GSYSN------LLRIFSHGVGSA--GGITVEAGKNENR-KPILQAAPRARR 363 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~sp~~~~l~~--~s~dg------~i~iwd~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~ 363 (421)
. ...++|+|||+.|+. +..++ .|++||+..++. ....+..+...+. .+.|+|+ ++
T Consensus 307 ~-----------~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spd--g~- 372 (723)
T 1xfd_A 307 Q-----------NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEK--GN- 372 (723)
T ss_dssp C-----------CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETT--TT-
T ss_pred c-----------CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCC--CC-
Confidence 0 026899999997775 44667 577777323323 1333443333333 3689988 44
Q ss_pred cccceeeeeccc---Cc-ccCC--CCC--ccccccc---cccCeEEEEEccCCCeEEEec
Q 014644 364 SSLSNLTRGLYR---QA-HENS--SSG--HHELSYN---LSSKLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 364 ~~~~~l~~g~~d---~~-~iw~--~~~--~~~~~~~---~~~~v~~~~~spd~~~la~~~ 412 (421)
.|+..+.+ +. ++|. ..+ ....+.. +...+..++|+|||+.|+...
T Consensus 373 ----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 373 ----KIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp ----EEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred ----EEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 56544443 55 8992 222 2222222 466788999999999988764
No 131
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.9e-23 Score=207.13 Aligned_cols=333 Identities=7% Similarity=0.000 Sum_probs=207.6
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCcee--EEeeecCCCCCccccccccc-------ccceeeccCCCCceee
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKV--KKIKEMDHFPFVSSENTLLA-------EKNFMNEHNPPSFAHG 105 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~--~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~ 105 (421)
.+..+.|. ++.+++++.|+ | +||+.+++. ..+....... ..+... ...+.++.++++...+
T Consensus 27 ~~~~~~w~----g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~----~~l~~~~~~~~~~~~~v~~~~~spd~~~~ 96 (706)
T 2z3z_A 27 YVVGLQWM----GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLN----ALMPEGCKFQTTDAFPSFRTLDAGRGLVV 96 (706)
T ss_dssp -CTTCEEE----TTEEEEEETTE-E-EEEC-------CEEEEHHHHH----TTC-----------CCCEEEEETTTTEEE
T ss_pred cCCCCcCc----CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhh----hhccchhccccccccCceeEEECCCCeEE
Confidence 35668883 66788888888 8 999998875 4443311000 000000 1235556666663333
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCC----ceeeeeeecCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEIS----DQCFNIVDMKPS 181 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~----~~~~~~~~~~~~ 181 (421)
... ++.+.+|+..+. ++.+.. .+...+.+++|+|||+.|+++.++.|++|++... ++..+.......
T Consensus 97 ~~~----~~~i~~~d~~~~---~~~~l~--~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 97 LFT----QGGLVGFDMLAR---KVTYLF--DTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp EEE----TTEEEEEETTTT---EEEEEE--CCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred EEE----CCEEEEEECCCC---ceEEcc--CCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCC
Confidence 221 367899998776 554443 5667789999999999999998899999999831 443332210000
Q ss_pred -------CCCccCCCeeEEEEecCCCCeEEEEE---------------------------------cCCeEEEEECCccc
Q 014644 182 -------NMDDLTEVITSAEFHPIYCNLLAYSS---------------------------------SRGFVRLVDMRQSA 221 (421)
Q Consensus 182 -------~~~~~~~~v~~~~~~p~~~~~l~s~~---------------------------------~d~~v~iwd~~~~~ 221 (421)
....+...+.++.|+||| +.|++++ .+..|++||+.+++
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 000011225889999999 8898887 34679999998765
Q ss_pred ccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-CC-----eEEEEECCCCCcceeEEe-ecc-Cccc
Q 014644 222 LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YM-----NLKLWDIRMDSTPVATFK-IHE-HLRP 293 (421)
Q Consensus 222 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~-----~i~i~d~~~~~~~~~~~~-~~~-~~~~ 293 (421)
.. ..... ..+...+..++|+|||++|++++ ++ .|++||+.+ ++....+. ... ....
T Consensus 247 ~~----~~~~~-----------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 247 TV----YLQTG-----------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EE----ECCCC-----------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCC
T ss_pred eE----eeccC-----------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeEC
Confidence 32 11111 12356789999999999888753 23 899999986 53333332 211 1110
Q ss_pred ccccccCCCcceeeeEEEEcC--CCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccc-eeeecCCcccccccceee
Q 014644 294 KLCDLYNNDSIFDKFECSVSG--DGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRK-PILQAAPRARRSSLSNLT 370 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~sp--~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 370 (421)
.+.+++|+| ||+++++++.||.++||.++........+..+...+.. +.|+|+ ++ .+++
T Consensus 311 ------------~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd--g~----~l~~ 372 (706)
T 2z3z_A 311 ------------PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK--GT----RLYF 372 (706)
T ss_dssp ------------CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT--SS----EEEE
T ss_pred ------------ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC--CC----EEEE
Confidence 014689999 99999999999999999887433556677777777766 789888 33 1334
Q ss_pred eecccC--c-ccC--CCCCccccccccccCeEEEEEccCCCeEEEec-C----CceEEEeC
Q 014644 371 RGLYRQ--A-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACAN-G----NSLFFHYA 421 (421)
Q Consensus 371 ~g~~d~--~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~----~~~~i~~~ 421 (421)
++..++ . .+| +..........+...+..++|+|||++|+.++ + ..+++|++
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 455554 2 666 32222233334667799999999999988764 2 34889863
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=1e-21 Score=181.75 Aligned_cols=245 Identities=13% Similarity=0.073 Sum_probs=180.4
Q ss_pred CCeEEEEeCC------CcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc-ccceeEE
Q 014644 47 GSMFILSTND------KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE-NMATKIA 119 (421)
Q Consensus 47 ~~~l~t~s~d------~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 119 (421)
+..++.++.+ ++|++||++.+..+.+.. +.. .+.++.+++++..++.++.+. ...+.+|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~--~~~------------~v~~~~~Spdg~~la~~s~~~~~~~i~~~ 208 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHR--SPQ------------PLMSPAWSPDGSKLAYVTFESGRSALVIQ 208 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEE--ESS------------CEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeC--CCC------------cceeeEEcCCCCEEEEEEecCCCcEEEEE
Confidence 5666666654 799999998665444433 222 466677777887777777643 3488999
Q ss_pred eecccceeeeeeeecCCCCcceEEEeecCCCCEEE-EE-cCC--cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE
Q 014644 120 NVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV-SA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF 195 (421)
Q Consensus 120 ~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 195 (421)
++.++ ++.+ + ..|...+.+++|+|||+.|+ ++ .++ .|++||+. .++... +..|...+.+++|
T Consensus 209 d~~tg---~~~~-l-~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~--------l~~~~~~~~~~~~ 274 (415)
T 2hqs_A 209 TLANG---AVRQ-V-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQ--------VTDGRSNNTEPTW 274 (415)
T ss_dssp ETTTC---CEEE-E-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEE--------CCCCSSCEEEEEE
T ss_pred ECCCC---cEEE-e-ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEe--------CcCCCCcccceEE
Confidence 99876 5543 3 57788999999999999888 55 555 49999998 444332 2567788999999
Q ss_pred ecCCCCeEEEEEc-CC--eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C---C
Q 014644 196 HPIYCNLLAYSSS-RG--FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y---M 268 (421)
Q Consensus 196 ~p~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~---~ 268 (421)
+|+| +.|++++. ++ .|.+||+.++... .+.. +...+..++|+|||++|++++ + .
T Consensus 275 spdg-~~l~~~s~~~g~~~i~~~d~~~~~~~-----~l~~-------------~~~~~~~~~~spdG~~l~~~~~~~g~~ 335 (415)
T 2hqs_A 275 FPDS-QNLAFTSDQAGRPQVYKVNINGGAPQ-----RITW-------------EGSQNQDADVSSDGKFMVMVSSNGGQQ 335 (415)
T ss_dssp CTTS-SEEEEEECTTSSCEEEEEETTSSCCE-----ECCC-------------SSSEEEEEEECTTSSEEEEEEECSSCE
T ss_pred CCCC-CEEEEEECCCCCcEEEEEECCCCCEE-----EEec-------------CCCcccCeEECCCCCEEEEEECcCCce
Confidence 9999 88887775 44 6777898876421 1111 245788999999999998764 2 4
Q ss_pred eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCC---eEEEEecCCCCCceeEEec
Q 014644 269 NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSN---LLRIFSHGVGSAGGITVEA 345 (421)
Q Consensus 269 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg---~i~iwd~~~~~~~~~~~~~ 345 (421)
.|++||+.+ ++. ..+..+. .+ .+++|+|+|++|++++.++ .|++||+.. .....+..
T Consensus 336 ~i~~~d~~~-~~~-~~l~~~~-~~---------------~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g--~~~~~l~~ 395 (415)
T 2hqs_A 336 HIAKQDLAT-GGV-QVLSSTF-LD---------------ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG--RFKARLPA 395 (415)
T ss_dssp EEEEEETTT-CCE-EECCCSS-SC---------------EEEEECTTSSEEEEEEEETTEEEEEEEETTS--CCEEECCC
T ss_pred EEEEEECCC-CCE-EEecCCC-Cc---------------CCeEEcCCCCEEEEEEcCCCccEEEEEECCC--CcEEEeeC
Confidence 899999985 544 3343333 22 6899999999999888776 799999873 46778899
Q ss_pred CCCCccceeeecC
Q 014644 346 GKNENRKPILQAA 358 (421)
Q Consensus 346 ~~~~~~~~~~~~~ 358 (421)
|.+.+..++|+|.
T Consensus 396 ~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 396 TDGQVKFPAWSPY 408 (415)
T ss_dssp SSSEEEEEEECCC
T ss_pred CCCCCcCCccccc
Confidence 9999999999987
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=4e-23 Score=181.99 Aligned_cols=229 Identities=11% Similarity=0.015 Sum_probs=162.0
Q ss_pred CCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCcc-CCCeeEEEEecCCCCeEEEEE--cCCeE
Q 014644 136 AHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDL-TEVITSAEFHPIYCNLLAYSS--SRGFV 212 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~--~d~~v 212 (421)
.|...|.+++|+|++++|+++.++.|++||+...++..... ..+ ...+.+++|+|++ +.|++++ .++..
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVD-------TGFATICNNDHGISPDG-ALYAISDKVEFGKS 110 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECC-------CTTCCCBCSCCEECTTS-SEEEEEECTTTSSC
T ss_pred cCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEec-------cccccccccceEECCCC-CEEEEEEeCCCCcc
Confidence 46778999999999999999878899999998314444332 233 4678999999999 8999888 33455
Q ss_pred EEEE--CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE-Eec-CCeEEEEECCCCCcceeEEeec
Q 014644 213 RLVD--MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL-SRD-YMNLKLWDIRMDSTPVATFKIH 288 (421)
Q Consensus 213 ~iwd--~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~-~~~i~i~d~~~~~~~~~~~~~~ 288 (421)
++|. +..+.. ..+.. ...+..++|+|++++|+ ++. ++.++||+++..+.....+..+
T Consensus 111 ~l~~~~~~~~~~-----~~~~~--------------~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 111 AIYLLPSTGGTP-----RLMTK--------------NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp EEEEEETTCCCC-----EECCS--------------SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred eEEEEECCCCce-----EEeec--------------CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 5554 444321 22222 23478899999999887 454 4889999875434444444444
Q ss_pred cCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccc
Q 014644 289 EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLS 367 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (421)
...+ .+++|+|++++|+.++ .++.+++|++.........+..|...+..+.|+|+ ++
T Consensus 172 ~~~~---------------~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d--g~----- 229 (297)
T 2ojh_A 172 EGRN---------------DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS--GD----- 229 (297)
T ss_dssp SSCE---------------EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT--SS-----
T ss_pred CCcc---------------ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC--CC-----
Confidence 4332 6899999999888766 58999999987544566777888888888999988 43
Q ss_pred eeeeeccc-----------Cc-ccCCC--CCc--cccccccccCeEEEEEccCCCeEEEecC
Q 014644 368 NLTRGLYR-----------QA-HENSS--SGH--HELSYNLSSKLLHLAWHPTTNLIACANG 413 (421)
Q Consensus 368 ~l~~g~~d-----------~~-~iw~~--~~~--~~~~~~~~~~v~~~~~spd~~~la~~~~ 413 (421)
.|+.++.+ +. .+|+. ++. +....++...+..++|+||++.|++++.
T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 230 KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 67777665 23 56632 222 2223366778999999999999998873
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=1.2e-21 Score=202.11 Aligned_cols=319 Identities=10% Similarity=0.061 Sum_probs=211.9
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCC-CCceeeeecccccc
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP-PSFAHGYHLEWTEN 113 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 113 (421)
.+..+.| +|+|++++.+ .++.|.+||+....+..+.. ........+......+..+.++ +++..++.+. .
T Consensus 246 ~~~~~~~--SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~---~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~---~ 316 (1045)
T 1k32_A 246 DYYPRHL--NTDGRRILFS-KGGSIYIFNPDTEKIEKIEI---GDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS---R 316 (1045)
T ss_dssp SSCEEEE--EESSSCEEEE-ETTEEEEECTTTCCEEECCC---CCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE---T
T ss_pred CcceeeE--cCCCCEEEEE-eCCEEEEecCCceEeeeecc---CcccccccccccccccceeeecCCCCCEEEEEE---c
Confidence 4667788 6889988887 48999999995544432221 1100000111112234455555 5655555544 3
Q ss_pred cceeEEeecccceeeeeeeecCCCCc-ceEEEeecCCCCEEEEE-cCCcEE-EEeCCCCceeeeeeecCCCCCCccCCCe
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDF-NINSISNNSDCETFVSA-DDLRIN-LWNLEISDQCFNIVDMKPSNMDDLTEVI 190 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~~~~~~l~s~-~d~~i~-lwd~~~~~~~~~~~~~~~~~~~~~~~~v 190 (421)
..+.+|+.... .... + ..|.. .+..++|+ ||+.|+++ .+..+. +|++. .++... + .+|...+
T Consensus 317 ~~i~~~~~~~~---~~~~-~-~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~-~~~~~~-l-------~~~~~~~ 381 (1045)
T 1k32_A 317 GQAFIQDVSGT---YVLK-V-PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR-TGKAEK-F-------EENLGNV 381 (1045)
T ss_dssp TEEEEECTTSS---BEEE-C-SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT-TCCEEE-C-------CCCCCSE
T ss_pred CEEEEEcCCCC---ceEE-c-cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC-CCCceE-e-------cCCccce
Confidence 45677777654 3333 4 56777 89999999 99999998 877888 88987 333322 1 3677889
Q ss_pred eEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC---
Q 014644 191 TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY--- 267 (421)
Q Consensus 191 ~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--- 267 (421)
.+++|+|+| +.|++++.++.|++||+.+++.. ..... |...+..++|+|||++|++++.
T Consensus 382 ~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~~----~~~~~-------------~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 382 FAMGVDRNG-KFAVVANDRFEIMTVDLETGKPT----VIERS-------------REAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp EEEEECTTS-SEEEEEETTSEEEEEETTTCCEE----EEEEC-------------SSSCCCCEEECTTSCEEEEEEEECS
T ss_pred eeeEECCCC-CEEEEECCCCeEEEEECCCCceE----EeccC-------------CCCCccceEECCCCCeEEEEecCcc
Confidence 999999999 99999999999999999887543 22223 3667899999999999987643
Q ss_pred --------CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC--
Q 014644 268 --------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS-- 337 (421)
Q Consensus 268 --------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~-- 337 (421)
+.|++||+.+ ++ ...+..+.... ..++|+|||++|++++.++...+|+.....
T Consensus 444 ~~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~---------------~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~ 506 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEG-RK-IFAATTENSHD---------------YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFS 506 (1045)
T ss_dssp STTCSCCEEEEEEEETTT-TE-EEECSCSSSBE---------------EEEEECTTSCEEEEEESCCCCCEECSSSSCEE
T ss_pred ccccCCCCCeEEEEECCC-Cc-EEEeeCCCccc---------------CCceEcCCCCEEEEEecccCCcCcchhccccc
Confidence 3899999985 55 45555554432 678999999999999987777666643210
Q ss_pred ----------------------------------------CceeEEecCCCCccceeeecCCcccccccceeee------
Q 014644 338 ----------------------------------------AGGITVEAGKNENRKPILQAAPRARRSSLSNLTR------ 371 (421)
Q Consensus 338 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 371 (421)
.....+..|...+..+.++++ +. .+++
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~d--g~-----~~~~~~~~g~ 579 (1045)
T 1k32_A 507 FEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES--SI-----LIYSVPVHGE 579 (1045)
T ss_dssp CCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSS--EE-----EEEECCCCCS
T ss_pred cccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCC--Ce-----EEEEecccCc
Confidence 012233345566667777776 33 4553
Q ss_pred -----ecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 372 -----GLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 372 -----g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
.+.+.. .+| +......... ...+..++|||||+.|++++.+.+++|++
T Consensus 580 ~~~~~~~~~~~~~l~~~d~~~~~~~~l--~~~v~~~~~S~DG~~l~~~~~~~i~~~d~ 635 (1045)
T 1k32_A 580 FAAYYQGAPEKGVLLKYDVKTRKVTEV--KNNLTDLRLSADRKTVMVRKDDGKIYTFP 635 (1045)
T ss_dssp HHHHHHCCCCCEEEEEEETTTCCEEEE--EEEEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccccccccCCCceEEEEECCCCcEEEe--ecCcceEEECCCCCEEEEEcCCcEEEEeC
Confidence 122233 555 2222111111 16688999999999999999889999973
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=2.6e-21 Score=199.57 Aligned_cols=344 Identities=9% Similarity=-0.009 Sum_probs=212.8
Q ss_pred ccccccEEEEEEEEcCCCCeEEEEeCC------CcEEEeecCCceeEEeeecCCCCCc-------ccccccccccceeec
Q 014644 30 LEIEEKINRVRWCAAPNGSMFILSTND------KTIKLWKVRDQKVKKIKEMDHFPFV-------SSENTLLAEKNFMNE 96 (421)
Q Consensus 30 ~~h~~~V~~v~~~~~~~~~~l~t~s~d------~~v~lwd~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~~~ 96 (421)
.+|...|.+++| +|||++||.++.+ ..|++|++.+++.+.+.. +...+ ..++|++... ++..
T Consensus 49 t~~~~~v~~~~~--SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~--~~~~~~~~~~~~~~~~~SpDg~-ll~~ 123 (1045)
T 1k32_A 49 VSNLGVINNARF--FPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITY--FSGKSTGRRMFTDVAGFDPDGN-LIIS 123 (1045)
T ss_dssp ECSSSEEEEEEE--CTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCC--CCEEEETTEECSEEEEECTTCC-EEEE
T ss_pred eeCCCcccCeEE--CCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEccc--CCCcccccccccccccCCCCCE-EEEE
Confidence 468889999999 7999999988654 489999999887554432 44444 5666665544 3322
Q ss_pred cCCC------Cceeeee--ccc-c---------------------------------cccceeEEeecccceeeeeeeec
Q 014644 97 HNPP------SFAHGYH--LEW-T---------------------------------ENMATKIANVGNSVHARCQKVYP 134 (421)
Q Consensus 97 ~~~~------~~~~~~~--g~~-~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 134 (421)
.... ..-+..+ +.. . .....++|..... ...+.+
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~---~~~~~l- 199 (1045)
T 1k32_A 124 TDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNS---GAFKKI- 199 (1045)
T ss_dssp ECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEET---TEEEEE-
T ss_pred ECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCC---CCeEEC-
Confidence 2110 0011110 000 0 0112334432222 122334
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEE
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 213 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~ 213 (421)
.+|...+.++.|+++ .+++++ .|++++||.++..+...+.+ ..|. .+..++|+|+| +.|+++ .++.|.
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l-------~~~~-~~~~~~~SpDG-~~la~~-~~~~i~ 268 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKH-------TSFT-DYYPRHLNTDG-RRILFS-KGGSIY 268 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEEC-------CCCC-SSCEEEEEESS-SCEEEE-ETTEEE
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEe-------cCCC-CcceeeEcCCC-CEEEEE-eCCEEE
Confidence 688999999999988 566677 88999999876433333222 2232 24455666666 555554 366666
Q ss_pred EEECCccccc--cc--------------chhhhccc-ccc-----------------CCCccccccccc-ceeEEEEcCC
Q 014644 214 LVDMRQSALC--DH--------------SARILRDA-AES-----------------HGSKSFFTEIIA-SISDIKFAND 258 (421)
Q Consensus 214 iwd~~~~~~~--~~--------------~~~~~~~h-~~~-----------------~~~~~~~~~~~~-~v~~~~~s~~ 258 (421)
+||+...... .. ....+.-+ ..+ ......+..+.. .+..++|+ |
T Consensus 269 ~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 269 IFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp EECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-S
T ss_pred EecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-C
Confidence 6665221110 00 00000000 000 000011233445 78899999 9
Q ss_pred CCEEEEecC-CeEE-EEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 259 GQHLLSRDY-MNLK-LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 259 ~~~l~~~~~-~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
|+.|+.+++ ..+. +||+.. ++. ..+..+...+ ..++|+|||++|++++.++.|++||+.++
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~-~~~-~~l~~~~~~~---------------~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRT-GKA-EKFEENLGNV---------------FAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTT-CCE-EECCCCCCSE---------------EEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCeEEEEECCCceEEEEECCC-CCc-eEecCCccce---------------eeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 999998876 7788 899874 443 3333443322 68999999999999999999999999987
Q ss_pred CCceeEEecCCCCccceeeecCCcccccccceeeeecccC----------c-ccCCC-CCccccccccccCeEEEEEccC
Q 014644 337 SAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQ----------A-HENSS-SGHHELSYNLSSKLLHLAWHPT 404 (421)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~----------~-~iw~~-~~~~~~~~~~~~~v~~~~~spd 404 (421)
.....+.+|...+..++|+|+ ++ .|+.++.++ . ++|+. ++.......+...+..++|+||
T Consensus 411 -~~~~~~~~~~~~v~~~~~SpD--G~-----~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spd 482 (1045)
T 1k32_A 411 -KPTVIERSREAMITDFTISDN--SR-----FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 482 (1045)
T ss_dssp -CEEEEEECSSSCCCCEEECTT--SC-----EEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTT
T ss_pred -ceEEeccCCCCCccceEECCC--CC-----eEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCC
Confidence 556666789999999999999 44 777776543 4 78833 2335556677778899999999
Q ss_pred CCeEEEecC-CceEEE
Q 014644 405 TNLIACANG-NSLFFH 419 (421)
Q Consensus 405 ~~~la~~~~-~~~~i~ 419 (421)
|+.|+.++. +....|
T Consensus 483 G~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 483 SKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp SCEEEEEESCCCCCEE
T ss_pred CCEEEEEecccCCcCc
Confidence 999998874 334444
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.1e-20 Score=169.51 Aligned_cols=231 Identities=8% Similarity=0.018 Sum_probs=154.8
Q ss_pred CCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecccc
Q 014644 46 NGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNSV 125 (421)
Q Consensus 46 ~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 125 (421)
....+++++.+++|++||..+++........ .. .. .+.+++++.++...... ...+.+|+..+.
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~------------~~-~~~~s~dg~~l~~~~~~-~~~i~~~d~~~~- 72 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLG-YD------------FV-DTAITSDCSNVVVTSDF-CQTLVQIETQLE- 72 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECC-CC------------EE-EEEECSSSCEEEEEEST-TCEEEEEECSSS-
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEcc-CC------------cc-eEEEcCCCCEEEEEeCC-CCeEEEEECCCC-
Confidence 3455888889999999999988854433322 11 22 44555555544333321 336788888776
Q ss_pred eeee-eeeecCCCCcceEEEeecCCCCEEEEE-cC-C--cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCC
Q 014644 126 HARC-QKVYPHAHDFNINSISNNSDCETFVSA-DD-L--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYC 200 (421)
Q Consensus 126 ~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d-~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 200 (421)
+. .+.+ ..+.....+++|+|++++|+++ .+ + .|.+||+. .++....+ . ......+++|+|++
T Consensus 73 --~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~~-------~-~~~~~~~~~~spdg- 139 (331)
T 3u4y_A 73 --PPKVVAI-QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFISTI-------P-IPYDAVGIAISPNG- 139 (331)
T ss_dssp --SCEEEEE-EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEEE-------E-CCTTEEEEEECTTS-
T ss_pred --ceeEEec-ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEEE-------E-CCCCccceEECCCC-
Confidence 44 4444 4555555559999999999976 44 3 89999998 55555544 2 23446899999999
Q ss_pred CeEE-EEEcCCe-EEEEECCcccccccc-hhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEEC
Q 014644 201 NLLA-YSSSRGF-VRLVDMRQSALCDHS-ARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDI 275 (421)
Q Consensus 201 ~~l~-s~~~d~~-v~iwd~~~~~~~~~~-~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~ 275 (421)
+.++ +...++. |.+|++......... ...+. ....+..++|+|+|++++.+ .. +.|++||+
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~--------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFIS--------------GGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEEC--------------SSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCcccc--------------CCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 6454 4456577 999998854321100 01111 13457899999999976654 44 89999999
Q ss_pred CCCCcc---eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 276 RMDSTP---VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 276 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
.+ ++. +..+..+... ..++|+|+|++|++++ .++.|.+||+.++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~----------------~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 206 QN-PENITLLNAVGTNNLP----------------GTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SS-TTSCEEEEEEECSSCC----------------CCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred CC-CcccceeeeccCCCCC----------------ceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 86 666 6666544332 5899999999776654 5788999999876
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=4.5e-21 Score=172.80 Aligned_cols=243 Identities=9% Similarity=-0.000 Sum_probs=153.8
Q ss_pred CCCcceEEEeecCCCCEEEEE-c-CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cCCeE
Q 014644 136 AHDFNINSISNNSDCETFVSA-D-DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFV 212 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~~l~s~-~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d~~v 212 (421)
.|...+.+++|+|++++|+++ . ++.|++|+++........+. .+..+ ..+.+++|+|++ +.|++++ .++.|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~i 108 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA----ESALP-GSLTHISTDHQG-QFVFVGSYNAGNV 108 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE----EEECS-SCCSEEEECTTS-SEEEEEETTTTEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc----ccccC-CCCcEEEEcCCC-CEEEEEecCCCeE
Confidence 355678889999999988887 5 49999999972221111110 11222 378899999999 7776665 58999
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCccee----EEe
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVA----TFK 286 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~----~~~ 286 (421)
.+||+..+.. ......+.. ...+.+++|+|+|+++++++ . +.|++||+.+.++... .+.
T Consensus 109 ~~~d~~~~~~-~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 173 (343)
T 1ri6_A 109 SVTRLEDGLP-VGVVDVVEG--------------LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT 173 (343)
T ss_dssp EEEEEETTEE-EEEEEEECC--------------CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEECCCCcc-ccccccccC--------------CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc
Confidence 9999952211 111122222 24588999999999888764 4 9999999975343322 122
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCCC-Cc--eeEEecC------CCCccceeee
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVGS-AG--GITVEAG------KNENRKPILQ 356 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~~-~~--~~~~~~~------~~~~~~~~~~ 356 (421)
.+... .+..++|+|+++++++++ .++.|++|++.... .. ...+... ...+..++|+
T Consensus 174 ~~~~~--------------~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 174 TVEGA--------------GPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp CSTTC--------------CEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred cCCCC--------------CcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 22111 126799999999776554 78999999996421 21 1122211 1233468888
Q ss_pred cCCcccccccceee-eecccCc-ccCCCC---Cc--cccccccccCeEEEEEccCCCeEEEec--CCceEEEe
Q 014644 357 AAPRARRSSLSNLT-RGLYRQA-HENSSS---GH--HELSYNLSSKLLHLAWHPTTNLIACAN--GNSLFFHY 420 (421)
Q Consensus 357 ~~~~~~~~~~~~l~-~g~~d~~-~iw~~~---~~--~~~~~~~~~~v~~~~~spd~~~la~~~--~~~~~i~~ 420 (421)
|+ ++ .|+ ++..++. .+|+.. +. ..........+..++|+|++++|++++ ++.+.+|.
T Consensus 240 ~d--g~-----~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 240 PD--GR-----HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp TT--SS-----EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred CC--CC-----EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEE
Confidence 87 33 444 5656777 999332 11 111222233488999999999888877 46799984
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=5.1e-20 Score=166.66 Aligned_cols=247 Identities=8% Similarity=-0.033 Sum_probs=169.5
Q ss_pred cccccccEEEEEEEEcCCCCeEEEEeC-------CCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCC
Q 014644 29 SLEIEEKINRVRWCAAPNGSMFILSTN-------DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPS 101 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~~~~l~t~s~-------d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 101 (421)
.......+..++| +++++++++++. ++.|.+||..+++....... ...... +.++++
T Consensus 36 ~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~------------~~~s~d 99 (353)
T 3vgz_A 36 RKAVGKGAYEMAY--SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFG------------ATINNT 99 (353)
T ss_dssp EEEEESSEEEEEE--ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCS------------EEEETT
T ss_pred hhhhccCccceEE--CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcce------------EEECCC
Confidence 3445677889999 688888887774 56899999998873332221 121222 233333
Q ss_pred ceeeeecccccccceeEEeecccceeeeeeeecCCCCc---------ceEEEeecCCCCEEEEE---cCCcEEEEeCCCC
Q 014644 102 FAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDF---------NINSISNNSDCETFVSA---DDLRINLWNLEIS 169 (421)
Q Consensus 102 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~~~~~~~l~s~---~d~~i~lwd~~~~ 169 (421)
+..+..... ....+.+|+..+. +.+..+ ..+.. .+.+++|+|++++++++ .++.|.+||.. .
T Consensus 100 g~~l~v~~~-~~~~v~~~d~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~-~ 173 (353)
T 3vgz_A 100 TQTLWFGNT-VNSAVTAIDAKTG---EVKGRL-VLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG-N 173 (353)
T ss_dssp TTEEEEEET-TTTEEEEEETTTC---CEEEEE-ESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT-T
T ss_pred CCEEEEEec-CCCEEEEEeCCCC---eeEEEE-ecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC-C
Confidence 332222111 1346788888776 555555 23221 27889999999987775 37889999998 5
Q ss_pred ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccc
Q 014644 170 DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIAS 249 (421)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 249 (421)
.+....+ ..+...+.+++|+|++ +.+++++.++.|.+||+.+++.. ..+... ..++...
T Consensus 174 ~~~~~~~-------~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~----~~~~~~---------~~~~~~~ 232 (353)
T 3vgz_A 174 IKLKTAI-------QNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKIL----SRKKLL---------DDGKEHF 232 (353)
T ss_dssp TEEEEEE-------CCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEE----EEEECC---------CSSSCCC
T ss_pred CceEEEe-------cCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEE----EEEEcC---------CCCCCcc
Confidence 5555544 3244557889999999 88999999999999999887643 221110 0112446
Q ss_pred eeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCC
Q 014644 250 ISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSN 326 (421)
Q Consensus 250 v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg 326 (421)
+..++|+|+|++++.++ . +.|.+||+.+ ++.+..+..... ..++|+|+|++++++. .++
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~-----------------~~~~~s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRN-GNILAKVAAPES-----------------LAVLFNPARNEAYVTHRQAG 294 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTT-CCEEEEEECSSC-----------------CCEEEETTTTEEEEEETTTT
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEEcCCC-----------------ceEEECCCCCEEEEEECCCC
Confidence 78899999999877653 4 8999999986 777777765432 4799999999766555 689
Q ss_pred eEEEEecCCC
Q 014644 327 LLRIFSHGVG 336 (421)
Q Consensus 327 ~i~iwd~~~~ 336 (421)
.|.+||+.++
T Consensus 295 ~v~~~d~~~~ 304 (353)
T 3vgz_A 295 KVSVIDAKSY 304 (353)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEECCCC
Confidence 9999999876
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=3e-20 Score=177.27 Aligned_cols=274 Identities=8% Similarity=-0.020 Sum_probs=186.5
Q ss_pred CCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeC--CCCceeee
Q 014644 98 NPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNL--EISDQCFN 174 (421)
Q Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~--~~~~~~~~ 174 (421)
++++...+..+.. ++.+.+||..+. +++..+..++. +..++|+|||++|+++ .|++|++||+ . ..+.+.
T Consensus 145 ~~p~~~~~vs~~~--d~~V~v~D~~t~---~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~-t~~~~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLRD--AGQIALVDGDSK---KIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAK-EPTKVA 216 (543)
T ss_dssp CCGGGEEEEEEGG--GTEEEEEETTTC---CEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSS-SCEEEE
T ss_pred cCCCCEEEEEEcC--CCeEEEEECCCc---eEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCC-CCcEEE
Confidence 3444555544433 458899998887 77888732444 8899999999999998 8899999999 5 455555
Q ss_pred eeecCCCCCCccCCCeeEEEEec----CCCCeEEEEE-cCCeEEEEECCcccccccchhhhccccccCCCccccccc-cc
Q 014644 175 IVDMKPSNMDDLTEVITSAEFHP----IYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI-IA 248 (421)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~p----~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~-~~ 248 (421)
.+ . +...+.+++|+| +| +++++++ .+++|.+||..+++.. +.+..+...... ...| ..
T Consensus 217 ~i-------~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~----~~i~~~g~~~~~---~~~~~~~ 280 (543)
T 1nir_A 217 EI-------K-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPK----QIVSTRGMTVDT---QTYHPEP 280 (543)
T ss_dssp EE-------E-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEE----EEEECCEECSSS---CCEESCC
T ss_pred EE-------e-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccc----eeecccCcccCc---cccccCC
Confidence 44 2 345679999999 99 8888877 5899999999887644 222221000000 0001 23
Q ss_pred ceeEEEEcCCCCEEEE-ecC-CeEEEEECCCCCccee--EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-
Q 014644 249 SISDIKFANDGQHLLS-RDY-MNLKLWDIRMDSTPVA--TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS- 323 (421)
Q Consensus 249 ~v~~~~~s~~~~~l~~-~~~-~~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s- 323 (421)
.+..+.++|++..++. ..+ +.|.+||+.+ .+.+. .+. +.... .+++|+|+|+++++++
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~-~~~l~~~~i~-~~~~~---------------~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKD-IDNLTVTSIG-AAPFL---------------HDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTT-SSSCEEEEEE-CCSSC---------------CCEEECTTSCEEEEEEG
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecC-CCcceeEEec-cCcCc---------------cCceECCCCCEEEEEec
Confidence 6889999998776654 445 9999999976 44333 332 22222 6899999999876554
Q ss_pred CCCeEEEEecCCCCCceeEEec----CCCCccceee-ecCCcccccccceeeeec-ccCc-ccCCC---------CCccc
Q 014644 324 YSNLLRIFSHGVGSAGGITVEA----GKNENRKPIL-QAAPRARRSSLSNLTRGL-YRQA-HENSS---------SGHHE 387 (421)
Q Consensus 324 ~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~l~~g~-~d~~-~iw~~---------~~~~~ 387 (421)
.+++|.+||+.++ .+...+.. |.+. ...+ .|+ + ...++++. .++. .+|+. .+.+.
T Consensus 344 ~~~~v~v~D~~tg-~l~~~i~~g~~ph~g~--g~~~~~p~--~----g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~ 414 (543)
T 1nir_A 344 NSNKVAVIDSKDR-RLSALVDVGKTPHPGR--GANFVHPK--Y----GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA 414 (543)
T ss_dssp GGTEEEEEETTTT-EEEEEEECSSSBCCTT--CEEEEETT--T----EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CCCeEEEEECCCC-eEEEeeccCCCCCCCC--CcccCCCC--C----ccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence 5899999999987 55556654 3332 2333 333 1 22667765 5677 99932 23334
Q ss_pred cccccccCeEEEEEccCCCeEEEec--------CCceEEEeC
Q 014644 388 LSYNLSSKLLHLAWHPTTNLIACAN--------GNSLFFHYA 421 (421)
Q Consensus 388 ~~~~~~~~v~~~~~spd~~~la~~~--------~~~~~i~~~ 421 (421)
....+...+..+++|||++.|++++ ++.|.+|+.
T Consensus 415 ~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 415 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp EEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred EEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 4556667788999999999999987 558999974
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3e-21 Score=187.03 Aligned_cols=265 Identities=8% Similarity=-0.034 Sum_probs=185.2
Q ss_pred cccEEEEEEEEcCCCCeEEEEeC-CCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 111 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~-d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 111 (421)
..+|.+++| ++||+.||.++. ||+++||++++++.+++
T Consensus 21 ~~~~~~~~~--~~DG~~la~~s~~~g~~~lw~~~~g~~~~l--------------------------------------- 59 (582)
T 3o4h_A 21 AVEKYSLQG--VVDGDKLLVVGFSEGSVNAYLYDGGETVKL--------------------------------------- 59 (582)
T ss_dssp HSCEEEEEE--EETTTEEEEEEEETTEEEEEEEETTEEEEC---------------------------------------
T ss_pred ccchheeec--CCCCCeEEEEEccCCceeEEEEcCCCcEee---------------------------------------
Confidence 567999999 689999999887 99999999855432211
Q ss_pred cccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-c---CCcEEEEeCCC--CceeeeeeecCCCCCCc
Q 014644 112 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D---DLRINLWNLEI--SDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~---d~~i~lwd~~~--~~~~~~~~~~~~~~~~~ 185 (421)
. ..+...+..++|+|| ++++++ . +...++|.++. .+..... ..
T Consensus 60 ---------------------t-~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l--------~~ 108 (582)
T 3o4h_A 60 ---------------------N-REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRL--------EA 108 (582)
T ss_dssp ---------------------C-SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEEC--------TT
T ss_pred ---------------------e-cccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccc--------cC
Confidence 1 233357899999999 777766 4 45567766543 3332221 11
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
. ..+...+|+|++...+++.+.++.+.+||+.+++.. .+... .. .+++|+|||++|+++
T Consensus 109 ~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~----~l~~~--------------~~--~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 109 V-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR----ELARL--------------PG--FGFVSDIRGDLIAGL 167 (582)
T ss_dssp S-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE----EEEEE--------------SS--CEEEEEEETTEEEEE
T ss_pred C-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE----EeecC--------------CC--ceEEECCCCCEEEEE
Confidence 1 223466888988444455555555669999876532 22222 22 789999999999964
Q ss_pred c-C----CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCC--eEEEEecCCCCC
Q 014644 266 D-Y----MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSN--LLRIFSHGVGSA 338 (421)
Q Consensus 266 ~-~----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg--~i~iwd~~~~~~ 338 (421)
+ + +.|++||+.+ ++.. .+..+...+ .+++|+|||++|+++..++ .|++||+.++ .
T Consensus 168 ~~~~~~~~~i~~~d~~~-g~~~-~l~~~~~~~---------------~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~-~ 229 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSS-GGLR-VFDSGEGSF---------------SSASISPGMKVTAGLETAREARLVTVDPRDG-S 229 (582)
T ss_dssp EEEETTEEEEEEEETTT-CCCE-EECCSSCEE---------------EEEEECTTSCEEEEEECSSCEEEEEECTTTC-C
T ss_pred EEcCCCCeEEEEEcCCC-CCce-EeecCCCcc---------------ccceECCCCCEEEEccCCCeeEEEEEcCCCC-c
Confidence 2 3 5799999875 5543 555555433 6899999999999888888 8999999987 3
Q ss_pred ceeEEecCCCCcccee--------eecCCcccccccceeeeecccCc-ccCCCCCccccccccccCeEEEEEccCCCeEE
Q 014644 339 GGITVEAGKNENRKPI--------LQAAPRARRSSLSNLTRGLYRQA-HENSSSGHHELSYNLSSKLLHLAWHPTTNLIA 409 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~~~~~~~~~~~v~~~~~spd~~~la 409 (421)
.. .+.+|...+..+. |+|+ +. .+++++.++. ++|.. +.... .....|.+++|+ |+++++
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~spd--g~-----~~~~~~~~g~~~l~~~-g~~~~--~~~~~v~~~~~s-dg~~l~ 297 (582)
T 3o4h_A 230 VE-DLELPSKDFSSYRPTAITWLGYLPD--GR-----LAVVARREGRSAVFID-GERVE--APQGNHGRVVLW-RGKLVT 297 (582)
T ss_dssp EE-ECCCSCSHHHHHCCSEEEEEEECTT--SC-----EEEEEEETTEEEEEET-TEEEC--CCSSEEEEEEEE-TTEEEE
T ss_pred EE-EccCCCcChhhhhhccccceeEcCC--Cc-----EEEEEEcCCcEEEEEE-CCeec--cCCCceEEEEec-CCEEEE
Confidence 34 7788888888888 9998 33 7889999999 99955 32221 234678899999 999988
Q ss_pred EecCC----ceEEEe
Q 014644 410 CANGN----SLFFHY 420 (421)
Q Consensus 410 ~~~~~----~~~i~~ 420 (421)
+++.+ .+++|+
T Consensus 298 ~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 298 SHTSLSTPPRIVSLP 312 (582)
T ss_dssp EEEETTEEEEEEEET
T ss_pred EEcCCCCCCeEEEEc
Confidence 77632 355554
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=7.4e-20 Score=164.77 Aligned_cols=264 Identities=9% Similarity=0.086 Sum_probs=168.2
Q ss_pred ccccccccccccEEEEEEEEcCCCCeEEEEeCC-CcEEEeecC--CceeEEeeecCCCCCcccccccccccceeeccCCC
Q 014644 24 FDYLKSLEIEEKINRVRWCAAPNGSMFILSTND-KTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP 100 (421)
Q Consensus 24 ~~~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d-~~v~lwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 100 (421)
+..+..+.|...+.+++| +|++++|++++.+ +.|++|+++ +++...+........+. .+.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~s~ 93 (343)
T 1ri6_A 28 LTLTQVVDVPGQVQPMVV--SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT------------HISTDH 93 (343)
T ss_dssp EEEEEEEECSSCCCCEEE--CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS------------EEEECT
T ss_pred EEEeeeEecCCCCceEEE--CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc------------EEEEcC
Confidence 344555677888999999 7999988888887 999999998 55544443332222333 333444
Q ss_pred CceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeee--
Q 014644 101 SFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIV-- 176 (421)
Q Consensus 101 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~-- 176 (421)
++.++..... ..+.+.+|++..+...+..+.+ ..+ ..+.+++|+|++++|+++ .++.|++||+...+......
T Consensus 94 dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 94 QGQFVFVGSY-NAGNVSVTRLEDGLPVGVVDVV-EGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp TSSEEEEEET-TTTEEEEEEEETTEEEEEEEEE-CCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEec-CCCeEEEEECCCCccccccccc-cCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 5544433322 1346889998533233555555 333 458999999999977765 79999999998424332211
Q ss_pred ecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cCCeEEEEECCc--ccccccchhhhccccccCCCcccccccccceeEE
Q 014644 177 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEIIASISDI 253 (421)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~ 253 (421)
.. . ......+.+++|+|++ +++++++ .++.|.+||+.. +... ....... .+.. ......+..+
T Consensus 171 ~~---~-~~~~~~~~~~~~~pdg-~~l~~~~~~~~~i~~~~~~~~~g~~~--~~~~~~~---~~~~----~~~~~~~~~i 236 (343)
T 1ri6_A 171 EV---T-TVEGAGPRHMVFHPNE-QYAYCVNELNSSVDVWELKDPHGNIE--CVQTLDM---MPEN----FSDTRWAADI 236 (343)
T ss_dssp EE---E-CSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEESSCTTSCCE--EEEEEEC---SCTT----CCSCCCEEEE
T ss_pred cc---c-cCCCCCcceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCcEE--EEeeccc---cCcc----ccccCCccce
Confidence 00 0 1123467889999999 7665554 889999999964 2211 0011110 0000 0012356789
Q ss_pred EEcCCCCEEEEe-cC-CeEEEEECCCCC---cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCe
Q 014644 254 KFANDGQHLLSR-DY-MNLKLWDIRMDS---TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNL 327 (421)
Q Consensus 254 ~~s~~~~~l~~~-~~-~~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~ 327 (421)
+|+|+|++|+++ .. +.|.+||+...+ +.+..+..+.. + .+++|+|+|++|++++ .++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~---------------~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P---------------RGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C---------------CCEEECTTSSEEEEECTTTCE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c---------------ceEEECCCCCEEEEecCCCCe
Confidence 999999988754 34 999999997312 23333333332 2 6899999999888887 5899
Q ss_pred EEEEecC
Q 014644 328 LRIFSHG 334 (421)
Q Consensus 328 i~iwd~~ 334 (421)
|.+|+++
T Consensus 301 v~v~~~d 307 (343)
T 1ri6_A 301 ISVYEIV 307 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999665
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.1e-20 Score=166.39 Aligned_cols=236 Identities=11% Similarity=0.126 Sum_probs=165.0
Q ss_pred cccccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCC-ceeEEeeecCCCCCcccccccccccceeeccCCCCceeeee
Q 014644 29 SLEIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRD-QKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 107 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (421)
...|...|.+++| +|++++|++++ ++.|++||+.+ ++...+
T Consensus 37 ~~~~~~~v~~~~~--spdg~~l~~~~-~~~i~~~d~~~~~~~~~~----------------------------------- 78 (297)
T 2ojh_A 37 VWQTPELFEAPNW--SPDGKYLLLNS-EGLLYRLSLAGDPSPEKV----------------------------------- 78 (297)
T ss_dssp EEEESSCCEEEEE--CTTSSEEEEEE-TTEEEEEESSSCCSCEEC-----------------------------------
T ss_pred eccCCcceEeeEE--CCCCCEEEEEc-CCeEEEEeCCCCCCceEe-----------------------------------
Confidence 3568889999999 79999999886 88999999987 542211
Q ss_pred cccccccceeEEeecccceeeeeeeecCCC-CcceEEEeecCCCCEEEEE-cC--CcEEEEeCCCCceeeeeeecCCCCC
Q 014644 108 LEWTENMATKIANVGNSVHARCQKVYPHAH-DFNINSISNNSDCETFVSA-DD--LRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~-~d--~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
. ..+ ...+.+++|+|++++|+++ .+ +..+||.++........+
T Consensus 79 -------------------------~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~------- 125 (297)
T 2ojh_A 79 -------------------------D-TGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM------- 125 (297)
T ss_dssp -------------------------C-CTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC-------
T ss_pred -------------------------c-cccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe-------
Confidence 1 223 4668899999999999986 33 456666554222223222
Q ss_pred CccCCCeeEEEEecCCCCeEE-EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 184 DDLTEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 184 ~~~~~~v~~~~~~p~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
..+ ..+..++|+|++ +.|+ +++.++.+++|++...... ...+. .+...+..++|+|+|++|
T Consensus 126 ~~~-~~~~~~~~spdg-~~l~~~~~~~~~~~l~~~~~~~~~---~~~~~-------------~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 126 TKN-LPSYWHGWSPDG-KSFTYCGIRDQVFDIYSMDIDSGV---ETRLT-------------HGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp CSS-SSEEEEEECTTS-SEEEEEEEETTEEEEEEEETTTCC---EEECC-------------CSSSCEEEEEECTTSSEE
T ss_pred ecC-CCccceEECCCC-CEEEEEECCCCceEEEEEECCCCc---ceEcc-------------cCCCccccceECCCCCEE
Confidence 222 348899999999 6665 7889999999986432111 01111 225678999999999988
Q ss_pred EEec--CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC-----------CeEE
Q 014644 263 LSRD--YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS-----------NLLR 329 (421)
Q Consensus 263 ~~~~--~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d-----------g~i~ 329 (421)
+.+. ++.+++|++...+.....+..+...+ ..++|+|+|++|++++.+ +.|+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGD---------------WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEE---------------EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCccc---------------CCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 7653 38899998864355555555544322 689999999999888765 5699
Q ss_pred EEecCCCCCc-eeEEecCCCCccceeeecCCcccccccceeeeeccc
Q 014644 330 IFSHGVGSAG-GITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYR 375 (421)
Q Consensus 330 iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d 375 (421)
+||+.++... ...+.+|...+..+.|+|+ +. .|++++.+
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spd--g~-----~l~~~~~~ 292 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPD--GD-----EFAYVRYF 292 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTT--SS-----EEEEEEEC
T ss_pred EEecCCCCceeeeccCCCCcccccceECCC--CC-----EEEEEEec
Confidence 9999877332 3344588889999999998 33 66666544
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=6.6e-21 Score=171.26 Aligned_cols=233 Identities=13% Similarity=0.008 Sum_probs=160.5
Q ss_pred ceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE----------
Q 014644 140 NINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS---------- 207 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---------- 207 (421)
.+..++|+|+++.++. + .++.|.+||+. .++....+.... ...+...+.+++|+|++ +.|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~--~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLV-TGETLGRIDLST--PEERVKSLFGAALSPDG-KTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETT-TCCEEEEEECCB--TTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECC-CCCeEeeEEcCC--cccccccccceEECCCC-CEEEEEecccccccccc
Confidence 3678999999987654 5 78999999998 455554442110 00122367889999999 8888776
Q ss_pred --cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEE
Q 014644 208 --SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 208 --~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~ 285 (421)
.++.|.+||+.+++.. ..+.. ...+..++|+|+|++|+++ ++.|++||+.+ ++....+
T Consensus 111 ~~~~~~i~v~d~~~~~~~----~~~~~--------------~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~-~~~~~~~ 170 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRR----KAFEA--------------PRQITMLAWARDGSKLYGL-GRDLHVMDPEA-GTLVEDK 170 (337)
T ss_dssp EECCCEEEEEETTTTEEE----EEEEC--------------CSSCCCEEECTTSSCEEEE-SSSEEEEETTT-TEEEEEE
T ss_pred cccCceEEEEECCCCcEE----EEEeC--------------CCCcceeEECCCCCEEEEe-CCeEEEEECCC-CcEeeee
Confidence 5799999999876543 22222 2357789999999988887 57899999986 7766666
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC-C-----------------------eEEEEecCCCCCcee
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS-N-----------------------LLRIFSHGVGSAGGI 341 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d-g-----------------------~i~iwd~~~~~~~~~ 341 (421)
..+... ..+.|+|+++.++..+.. + .|.+||+.++.....
T Consensus 171 ~~~~~~----------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 171 PIQSWE----------------AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp CSTTTT----------------TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eccccC----------------CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 544321 134678888866554432 2 478999998754444
Q ss_pred EEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC-CccccccccccCeEEEEEccCCCeEEEec-CCceEE
Q 014644 342 TVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFF 418 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i 418 (421)
.+..+...+..+.++|+ ++ .++++ ++. .+|+.. ............+.+++|+||+++|++++ ++.+.+
T Consensus 235 ~~~~~~~~~~~~~~s~d--g~-----~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v 305 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPA--KT-----RAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAA 305 (337)
T ss_dssp EEEECSSCEEEEEECTT--SS-----EEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEE
T ss_pred ecCCCCCceeeEEECCC--CC-----EEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEE
Confidence 45566666778899988 44 66666 566 888432 22223333445688999999999888777 567999
Q ss_pred EeC
Q 014644 419 HYA 421 (421)
Q Consensus 419 ~~~ 421 (421)
|++
T Consensus 306 ~d~ 308 (337)
T 1pby_B 306 YDA 308 (337)
T ss_dssp EET
T ss_pred EEC
Confidence 974
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=8.9e-21 Score=189.05 Aligned_cols=288 Identities=10% Similarity=0.013 Sum_probs=191.4
Q ss_pred cceeeccCCCCceeeeeccc-cc---ccceeEEeecccceeeeeeeecCCCC------------------------cceE
Q 014644 91 KNFMNEHNPPSFAHGYHLEW-TE---NMATKIANVGNSVHARCQKVYPHAHD------------------------FNIN 142 (421)
Q Consensus 91 ~~~~~~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~h~------------------------~~v~ 142 (421)
..+..+.+++++.+++.++. +. ...+.+|+..++ +..+.+ ..+. ..|.
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG---QTRLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC---CEEEEE-CGGGTC--------------------CCEESC
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC---ceeEcc-chhhcccccccccchhhhhhhhhhhccccCcc
Confidence 34667778888888887766 32 137899998876 554444 3332 3488
Q ss_pred EEeecCCCCEEEEEcCCcEEEEeCCCCc--eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcc
Q 014644 143 SISNNSDCETFVSADDLRINLWNLEISD--QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQS 220 (421)
Q Consensus 143 ~l~~~~~~~~l~s~~d~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~ 220 (421)
+++|+|||++|+++.++.|++||+.... ... .+..|...+.+++|+||| +.|++++ ++.|++||+.++
T Consensus 113 ~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~--------~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVR--------QLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp CCEECTTSSEEEEEETTEEEEEESSSCSTTSCC--------BCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTT
T ss_pred eeEECCCCCEEEEEeCCcEEEEECCCCCcceEE--------EcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCC
Confidence 9999999999999955999999998331 332 235677889999999999 8888877 568999999886
Q ss_pred cccccchhhhccccccC--C-CcccccccccceeEEEEcCCCCEEEEecC-C----------------------------
Q 014644 221 ALCDHSARILRDAAESH--G-SKSFFTEIIASISDIKFANDGQHLLSRDY-M---------------------------- 268 (421)
Q Consensus 221 ~~~~~~~~~~~~h~~~~--~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~---------------------------- 268 (421)
+.. .....+.... . ...........+..++|+|||++|++++. +
T Consensus 183 ~~~----~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 258 (741)
T 2ecf_A 183 RQM----QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD 258 (741)
T ss_dssp EEE----ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS
T ss_pred CEE----EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC
Confidence 532 2111100000 0 00000000122578999999999987642 3
Q ss_pred -----eEEEEECCCCCcceeEEee--ccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC-----CCeEEEEecCCC
Q 014644 269 -----NLKLWDIRMDSTPVATFKI--HEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY-----SNLLRIFSHGVG 336 (421)
Q Consensus 269 -----~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~-----dg~i~iwd~~~~ 336 (421)
.|++||+.+.++....... +... +.+++| |||++|++++. +..|++||+.++
T Consensus 259 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~---------------~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 259 ANVQVKLGVISPAEQAQTQWIDLGKEQDIY---------------LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp CCCEEEEEEECSSTTCCCEEECCCSCSSEE---------------EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCeeEEEEEECCCCCceEEecCCCCcceE---------------EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCC
Confidence 7888888631333222211 2221 268999 99999987654 568999999987
Q ss_pred CCceeEEecCCC----CccceeeecCCcccccccceeeeecccCc-ccC--CCCCccccccccccCeEEE-EEccCCCeE
Q 014644 337 SAGGITVEAGKN----ENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHL-AWHPTTNLI 408 (421)
Q Consensus 337 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~-~~spd~~~l 408 (421)
.....+..+.. .+..+.|+|+ ++ .+++++.++. +|| +..+....+..+...|..+ +|+||++.|
T Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~spd--g~-----~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 323 -QQRVLAHETSPTWVPLHNSLRFLDD--GS-----ILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp -CEEEEEEEECSSCCCCCSCCEECTT--SC-----EEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEE
T ss_pred -ceEEEEEcCCCCcCCcCCceEECCC--Ce-----EEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEE
Confidence 44455554443 4568899998 43 7888888888 888 3222255556667778887 599999987
Q ss_pred EEec-CC---ceEEEe
Q 014644 409 ACAN-GN---SLFFHY 420 (421)
Q Consensus 409 a~~~-~~---~~~i~~ 420 (421)
+..+ .+ .+.||.
T Consensus 395 ~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 395 YFRAGIESARESQIYA 410 (741)
T ss_dssp EEEECSSCTTCBEEEE
T ss_pred EEEEeCCCCceEEEEE
Confidence 6544 43 577775
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=2.1e-20 Score=185.86 Aligned_cols=287 Identities=10% Similarity=0.018 Sum_probs=181.2
Q ss_pred eeeccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCc---ceEEEeecCCCCEEEEE-cC---------C
Q 014644 93 FMNEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDF---NINSISNNSDCETFVSA-DD---------L 159 (421)
Q Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~s~-~d---------~ 159 (421)
..++.+++++.++.. + .++.+++|+..++ ++...+ .+|.. .|.+++|||||++|+++ .+ +
T Consensus 19 ~~~~~~spdg~~~~~-~--~dg~i~~~d~~~g---~~~~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-E--QKGTVRLWNVETN---TSTVLI-EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCBSSSSCBCCC-C--SSSCEEEBCGGGC---CCEEEE-CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccEEcCCCcEEEE-e--CCCCEEEEECCCC---cEEEEe-ccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 445566666665544 2 3458999999887 666666 66654 49999999999999997 53 7
Q ss_pred cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCC
Q 014644 160 RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGS 239 (421)
Q Consensus 160 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~ 239 (421)
.+++||+. +++. +.+ ....+|...+.+++|+||| +.|++++. +.|++||+.+++.. ++...+...
T Consensus 92 ~i~~~d~~-~~~~-~~l----~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~~----~~~~~~~~~--- 156 (723)
T 1xfd_A 92 YYVLSKIP-HGDP-QSL----DPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQAI----RVVSTGKEG--- 156 (723)
T ss_dssp EEEEEESS-SCCC-EEC----CCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCCE----EEECCCBTT---
T ss_pred eEEEEECC-CCce-Eec----cCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCceE----EEecCCCCC---
Confidence 88899998 4443 222 1224455668999999999 88888875 79999999886532 221110000
Q ss_pred cccccccc---------cceeEEEEcCCCCEEEEecC-C----------------------------------eEEEEEC
Q 014644 240 KSFFTEII---------ASISDIKFANDGQHLLSRDY-M----------------------------------NLKLWDI 275 (421)
Q Consensus 240 ~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~-~----------------------------------~i~i~d~ 275 (421)
..+.++. ..+..++|+|||++|++++. + .|++||+
T Consensus 157 -~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~ 235 (723)
T 1xfd_A 157 -VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL 235 (723)
T ss_dssp -TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred -ceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence 0000111 13478999999999987642 2 6888888
Q ss_pred CCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC----CCeEEEEecCCCCCceeEEe-cCCCCc
Q 014644 276 RMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY----SNLLRIFSHGVGSAGGITVE-AGKNEN 350 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~----dg~i~iwd~~~~~~~~~~~~-~~~~~~ 350 (421)
.+ ++....+..+.... . .-..+.+++|+|||++|++.+. +..|++||+.++ .....+. .+...+
T Consensus 236 ~~-~~~~~~l~~~~~~~-------~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 236 NG-PTHDLEMMPPDDPR-------M--REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG-VCTKKHEDESEAWL 304 (723)
T ss_dssp SS-SCCCEECCCCCCGG-------G--SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred CC-CceeEEeeCCccCC-------C--ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceEEEEeccCCEE
Confidence 75 54434444331100 0 0012368999999999877653 357999999987 3344433 344444
Q ss_pred ----cceeeecCCcccccccceeee--ecccC----c-ccC--C--CCCc---cccccccccCeEE-EEEccCCCeEEEe
Q 014644 351 ----RKPILQAAPRARRSSLSNLTR--GLYRQ----A-HEN--S--SSGH---HELSYNLSSKLLH-LAWHPTTNLIACA 411 (421)
Q Consensus 351 ----~~~~~~~~~~~~~~~~~~l~~--g~~d~----~-~iw--~--~~~~---~~~~~~~~~~v~~-~~~spd~~~la~~ 411 (421)
..+.|+|+ |+ .|+. +..++ . +|| + .++. ...+......+.. ++|+|||+.|+..
T Consensus 305 ~~~~~~~~~spd--g~-----~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~ 377 (723)
T 1xfd_A 305 HRQNEEPVFSKD--GR-----KFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFL 377 (723)
T ss_dssp CCCCCCCEECTT--SC-----SEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEE
T ss_pred eccCCCceEcCC--CC-----eEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEE
Confidence 37899998 44 4443 45565 3 455 4 2333 3333333344554 6999999999866
Q ss_pred c-C---CceEEEe
Q 014644 412 N-G---NSLFFHY 420 (421)
Q Consensus 412 ~-~---~~~~i~~ 420 (421)
+ . +.+.+|.
T Consensus 378 ~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 378 STEDLPRRRQLYS 390 (723)
T ss_dssp ESSSCTTCCEEEE
T ss_pred EcCCCCcceEEEE
Confidence 5 3 4577775
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.1e-19 Score=180.63 Aligned_cols=326 Identities=13% Similarity=0.041 Sum_probs=199.0
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc-----
Q 014644 38 RVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE----- 112 (421)
Q Consensus 38 ~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----- 112 (421)
.++| +|++. ++.++.|++|++||+.+++...+...+... ...+.+..+++++.+++.++...
T Consensus 20 ~~~~--s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNW--ISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMK----------SVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEE--SSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHH----------TTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccEE--CCCCe-EEEEcCCCCEEEEEcCCCcEEEEEcccccc----------ccceeeEEECCCCCeEEEEecCceeEEe
Confidence 6788 78885 455557999999999998855443311000 01255667778887777665421
Q ss_pred --ccceeEEeecccceeeee--eeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCC
Q 014644 113 --NMATKIANVGNSVHARCQ--KVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTE 188 (421)
Q Consensus 113 --~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~ 188 (421)
...+.+|++.++ +++ +.+ ...+..++|||||+.|+.+.++.|++|++. +++..++. ..++..
T Consensus 87 s~~~~i~~~d~~~g---~~~~~~~l----~~~~~~~~~SPDG~~la~~~~~~i~~~~~~-~g~~~~l~------~~~~~~ 152 (719)
T 1z68_A 87 SYTATYYIYDLSNG---EFVRGNEL----PRPIQYLCWSPVGSKLAYVYQNNIYLKQRP-GDPPFQIT------FNGREN 152 (719)
T ss_dssp CEEEEEEEEETTTT---EECCSSCC----CSSBCCEEECSSTTCEEEEETTEEEEESST-TSCCEECC------CCCBTT
T ss_pred ecceEEEEEECCCC---ccccceec----CcccccceECCCCCEEEEEECCeEEEEeCC-CCCcEEEe------cCCCcC
Confidence 358999998876 442 122 246889999999999999978899999998 44443321 122222
Q ss_pred C-----------------eeEEEEecCCCCeEEEEEcCC----------------------------------eEEEEEC
Q 014644 189 V-----------------ITSAEFHPIYCNLLAYSSSRG----------------------------------FVRLVDM 217 (421)
Q Consensus 189 ~-----------------v~~~~~~p~~~~~l~s~~~d~----------------------------------~v~iwd~ 217 (421)
. ..+++|+||| +.|++++.|. .|++||+
T Consensus 153 ~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~ 231 (719)
T 1z68_A 153 KIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT 231 (719)
T ss_dssp TEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES
T ss_pred CeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC
Confidence 1 2589999999 8999887652 7889998
Q ss_pred CcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-----CeEEEEE----CCCCCcceeEE---
Q 014644 218 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-----MNLKLWD----IRMDSTPVATF--- 285 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----~~i~i~d----~~~~~~~~~~~--- 285 (421)
.+++.... ..+.. ...+..|...+..++|+||++++++..+ ..|.+|| +.+ ++....+
T Consensus 232 ~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~ 301 (719)
T 1z68_A 232 TYPAYVGP-QEVPV--------PAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHI 301 (719)
T ss_dssp SCHHHHCC-EECCC--------CHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEE
T ss_pred CCCCccce-eEccC--------CccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecc
Confidence 87652100 00000 0012234678999999999887776422 3588899 764 5444333
Q ss_pred -eeccCcccccccccCCCcceeeeEEEEcCCCCEEEE--eeCCC--eEEEEecCCCCCceeEEecCCCCccceeeecCCc
Q 014644 286 -KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT--GSYSN--LLRIFSHGVGSAGGITVEAGKNENRKPILQAAPR 360 (421)
Q Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~--~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
..+...+.. .. ...+.|+|||+.|+. ...+| .|++||+.++. ...+..+...+..+.+. +
T Consensus 302 ~~~~~~~~~~-------~~---~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d-- 366 (719)
T 1z68_A 302 EESRTGWAGG-------FF---VSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-T-- 366 (719)
T ss_dssp EECSSSCSSS-------SS---CCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-C--
T ss_pred cccCCceEcc-------cc---CCccEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEecccCceEEEEEEEE-e--
Confidence 234433200 00 016789999996554 44555 57777776552 45555555556666666 4
Q ss_pred ccccccceeeeecc----cCc-ccCC--C-CC-c-cccc----cccccCeEEEEEccCCCeEEEec-C---CceEEEe
Q 014644 361 ARRSSLSNLTRGLY----RQA-HENS--S-SG-H-HELS----YNLSSKLLHLAWHPTTNLIACAN-G---NSLFFHY 420 (421)
Q Consensus 361 ~~~~~~~~l~~g~~----d~~-~iw~--~-~~-~-~~~~----~~~~~~v~~~~~spd~~~la~~~-~---~~~~i~~ 420 (421)
++ ..++++.. ++. ++|. . ++ . ...+ .++...+..++|+||++.|+..+ . -.+++|+
T Consensus 367 ~~----~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 367 QD----SLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHD 440 (719)
T ss_dssp SS----EEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred CC----EEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence 33 13444443 355 8882 2 12 1 1111 12456788999999999888543 2 2355654
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=6e-20 Score=170.52 Aligned_cols=224 Identities=8% Similarity=0.064 Sum_probs=151.6
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
...++.+++ ++++.++++++.|+ +++|+..... .... ..+.
T Consensus 36 ~~~~n~lav--s~~~~~l~~~~~dg-v~v~~~~~~~--~~~~--~~~~-------------------------------- 76 (434)
T 2oit_A 36 KERSSLLAV--SNKYGLVFAGGASG-LQIFPTKNLL--IQNK--PGDD-------------------------------- 76 (434)
T ss_dssp CSCCBCEEE--ETTTTEEEEEETTE-EEEEEHHHHC--CCCC--TTCC--------------------------------
T ss_pred CCCccEEEE--ecCCCEEEEECCCE-EEEEEchHhh--hhcc--cccC--------------------------------
Confidence 346889999 67888999999888 9998864321 0000 0000
Q ss_pred ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEE----EE-cCCcEEEEeCCCC-----c--eeeeeeecCC
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFV----SA-DDLRINLWNLEIS-----D--QCFNIVDMKP 180 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~----s~-~d~~i~lwd~~~~-----~--~~~~~~~~~~ 180 (421)
...+... .....+ .+...|.+++|+|++++|+ ++ .|++|++||++.. . +.+..+
T Consensus 77 --~~~~~~~------~~~~~~--~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~---- 142 (434)
T 2oit_A 77 --PNKIVDK------VQGLLV--PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYH---- 142 (434)
T ss_dssp --TTCEEEC------CCCEEE--CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEE----
T ss_pred --ccccccc------Cccccc--cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeee----
Confidence 0000000 111122 4677899999999999999 77 8999999998632 0 111111
Q ss_pred CCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC
Q 014644 181 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 260 (421)
Q Consensus 181 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (421)
..+.+|...|.+++|+|+...+|++++.||+|++||++++... ... ..|...+.+++|+|+|+
T Consensus 143 ~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~----~~~-------------~~~~~~v~~v~wspdg~ 205 (434)
T 2oit_A 143 KLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV----CAT-------------LPSTVAVTSVCWSPKGK 205 (434)
T ss_dssp ECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE----EEE-------------ECGGGCEEEEEECTTSS
T ss_pred eccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce----eec-------------cCCCCceeEEEEcCCCC
Confidence 1346799999999999984389999999999999999986422 111 12367899999999999
Q ss_pred EEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCC------eEEEEe
Q 014644 261 HLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSN------LLRIFS 332 (421)
Q Consensus 261 ~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg------~i~iwd 332 (421)
+|++|+. +.|++||++ ++....+..+.... .+....+.+++|++++.++++. +.+| .+++|+
T Consensus 206 ~lasgs~dg~v~iwd~~--~~~~~~~~~~~~~~--------~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~ 275 (434)
T 2oit_A 206 QLAVGKQNGTVVQYLPT--LQEKKVIPCPPFYE--------SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMAL 275 (434)
T ss_dssp CEEEEETTSCEEEECTT--CCEEEEECCCTTCC--------TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEE
T ss_pred EEEEEcCCCcEEEEccC--CcccccccCCcccC--------CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEE
Confidence 9999876 999999997 44444554433210 0111134799999998887543 3443 389999
Q ss_pred cCCC
Q 014644 333 HGVG 336 (421)
Q Consensus 333 ~~~~ 336 (421)
+...
T Consensus 276 l~~~ 279 (434)
T 2oit_A 276 LPKK 279 (434)
T ss_dssp CCCT
T ss_pred eccC
Confidence 9865
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.85 E-value=2.2e-18 Score=154.55 Aligned_cols=253 Identities=8% Similarity=0.036 Sum_probs=160.0
Q ss_pred cccEEEEEEEEcCCCCeEEEEeC-CCcEEEeecCCcee-EEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTN-DKTIKLWKVRDQKV-KKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~-d~~v~lwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
...+ .++| +|+++++++++. ++.|.+||..+++. ..... .+..+ ..++.+++++.++.. ..
T Consensus 40 ~~~~-~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~------------~~~~~~s~dg~~l~~-~~ 102 (331)
T 3u4y_A 40 YDFV-DTAI--TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-EGQSS------------MADVDITPDDQFAVT-VT 102 (331)
T ss_dssp CCEE-EEEE--CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-ECSSC------------CCCEEECTTSSEEEE-CC
T ss_pred CCcc-eEEE--cCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-cCCCC------------ccceEECCCCCEEEE-ec
Confidence 3445 8999 789986666655 89999999988874 22222 11121 111445556665552 22
Q ss_pred cccc--ceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEE-E-cCCc-EEEEeCCCCceeeeeeecCCCCCCc
Q 014644 111 TENM--ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS-A-DDLR-INLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 111 ~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~-~d~~-i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
.... .+.+|+..+. +.++.+ .. .....+++|+|+|++|++ + .++. |.+|++...+...... . ....
T Consensus 103 ~~~~~~~i~v~d~~~~---~~~~~~-~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~---~~~~ 173 (331)
T 3u4y_A 103 GLNHPFNMQSYSFLKN---KFISTI-PI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-Q---EFIS 173 (331)
T ss_dssp CSSSSCEEEEEETTTT---EEEEEE-EC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-E---EEEC
T ss_pred CCCCcccEEEEECCCC---CeEEEE-EC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-C---cccc
Confidence 2223 7899999877 666665 33 345689999999986655 4 6678 9999998444332210 0 0012
Q ss_pred cCCCeeEEEEecCCCCeEE-EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 186 LTEVITSAEFHPIYCNLLA-YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~-s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
....+.+++|+|++ ++++ ++..++.|++||+.+++.. +....+.. ...+..++|+|||++++.
T Consensus 174 ~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~--------------~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 174 GGTRPFNITFTPDG-NFAFVANLIGNSIGILETQNPENI-TLLNAVGT--------------NNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp SSSSEEEEEECTTS-SEEEEEETTTTEEEEEECSSTTSC-EEEEEEEC--------------SSCCCCEEECTTSSEEEE
T ss_pred CCCCccceEECCCC-CEEEEEeCCCCeEEEEECCCCccc-ceeeeccC--------------CCCCceEEECCCCCEEEE
Confidence 33457899999999 7554 4457899999999876641 00122222 356788999999998776
Q ss_pred ec-C-CeEEEEECCCCCcc--eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 265 RD-Y-MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 265 ~~-~-~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
+. . +.|.+||+.+ ++. +..+...-... ....+....++|+|+|++|++++ .++.|.+||+...
T Consensus 238 ~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 238 LTESTVDVFNFNQLS-GTLSFVKSFGHGLLID--------PRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp ECSSEEEEEEEETTT-TEEEEEEEEECCCCCC--------CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEcCCCEEEEEECCC-CceeeecccccccccC--------CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 53 3 8899999986 655 33332220000 00111114589999999886655 4679999999854
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=4.7e-18 Score=153.50 Aligned_cols=242 Identities=10% Similarity=0.021 Sum_probs=142.4
Q ss_pred CCCcEEEeecC--CceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc-ccccceeEEeecccceeeeee
Q 014644 55 NDKTIKLWKVR--DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW-TENMATKIANVGNSVHARCQK 131 (421)
Q Consensus 55 ~d~~v~lwd~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 131 (421)
.++.|.+|+++ ++++..+....... ....+.+++++. +..... .....+.+|++..+. .+.+.
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~------------~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~-~~~~~ 79 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQ------------NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQT-AHKLN 79 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECS------------CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTE-EEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccC------------CcceEEEccCCe-EEEEEecCCCceEEEEEecCCc-EEEee
Confidence 45678888765 45544433222222 223344455555 333322 234578899986542 23344
Q ss_pred eecCCCCcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCC----CCCCccCCCeeEEEEecCCCCeEEE
Q 014644 132 VYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKP----SNMDDLTEVITSAEFHPIYCNLLAY 205 (421)
Q Consensus 132 ~~~~~h~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~p~~~~~l~s 205 (421)
.+ ..+...+..++|+|+|++|+++ .+++|.+|++...+.......... .....+...+.+++|+|++ +++++
T Consensus 80 ~~-~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~ 157 (347)
T 3hfq_A 80 TV-VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN-RLAVI 157 (347)
T ss_dssp EE-EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTS-CEEEE
T ss_pred ee-ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCC-cEEEE
Confidence 43 4567788999999999988775 689999999964333222111100 0001123458899999999 66666
Q ss_pred EEcCCeEEEEECC-cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCC-Ccc
Q 014644 206 SSSRGFVRLVDMR-QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMD-STP 281 (421)
Q Consensus 206 ~~~d~~v~iwd~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~-~~~ 281 (421)
...++.|++||+. .+.... ...+.. .....+..++|+|||+++++. .. +.|.+|++... ++.
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~--~~~~~~------------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSE--QSVLTM------------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAF 223 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEE--EEEEEC------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred eCCCCEEEEEEECCCCcEEE--eeeEEc------------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCce
Confidence 6678999999998 333210 000111 002356789999999977664 44 89999998741 322
Q ss_pred --eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEE-EeeCCCeEEEEecCC
Q 014644 282 --VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYSNLLRIFSHGV 335 (421)
Q Consensus 282 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~dg~i~iwd~~~ 335 (421)
+..+....... . ....+..++|+|||++|+ +...++.|.+|++..
T Consensus 224 ~~~~~~~~~~~~~-------~--~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 224 TQLGIVKTIPADY-------T--AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEEEEEESSCTTC-------C--SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEeeeeeecCCCC-------C--CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 11222111100 0 000126899999999874 556689999999874
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=5.7e-19 Score=175.03 Aligned_cols=263 Identities=11% Similarity=0.058 Sum_probs=174.2
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccc
Q 014644 34 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 113 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 113 (421)
..|.+++| +|+ ..++.+ .|++|++||+.+++...+.. +...+ ..+.+++++..++.. .+
T Consensus 82 ~~v~~~~~--spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~--~~~~~------------~~~~~SpdG~~la~~---~~ 140 (706)
T 2z3z_A 82 FPSFRTLD--AGR-GLVVLF-TQGGLVGFDMLARKVTYLFD--TNEET------------ASLDFSPVGDRVAYV---RN 140 (706)
T ss_dssp CCCEEEEE--TTT-TEEEEE-ETTEEEEEETTTTEEEEEEC--CTTCC------------TTCEECTTSSEEEEE---ET
T ss_pred cCceeEEE--CCC-CeEEEE-ECCEEEEEECCCCceEEccC--Ccccc------------cCCcCCCCCCEEEEE---EC
Confidence 46999999 788 666665 45999999999887554433 23323 334455566555543 24
Q ss_pred cceeEEeecc-----cceeeeeeeecCCCCcc--------------eEEEeecCCCCEEEEE-cC---------------
Q 014644 114 MATKIANVGN-----SVHARCQKVYPHAHDFN--------------INSISNNSDCETFVSA-DD--------------- 158 (421)
Q Consensus 114 ~~~~~~~~~~-----~~~~~~~~~~~~~h~~~--------------v~~l~~~~~~~~l~s~-~d--------------- 158 (421)
..+.+|++.+ + +..+.. ..+... +.+++|+|||++|+++ .|
T Consensus 141 ~~i~v~~~~~~~~~~g---~~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~ 216 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMS---RAIAVT-IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPL 216 (706)
T ss_dssp TEEEEEECBCTTSCCC---CCEESC-SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSS
T ss_pred CeEEEEecCcccccCC---CcEEec-cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCC
Confidence 5789999876 5 444444 333332 5899999999999986 32
Q ss_pred ------------------CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC-----eEEEE
Q 014644 159 ------------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG-----FVRLV 215 (421)
Q Consensus 159 ------------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~-----~v~iw 215 (421)
..|++||+. +++..... ....|...+.+++|+|+| +.|++++.++ .|++|
T Consensus 217 ~~~~~~~~y~~~g~~~~~~~l~~~d~~-~~~~~~~~-----~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~ 289 (706)
T 2z3z_A 217 EAESKPLYYPMAGTPSHHVTVGIYHLA-TGKTVYLQ-----TGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAY 289 (706)
T ss_dssp SCEEEEECCCBTTSCCCEEEEEEEETT-TTEEEECC-----CCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEE
T ss_pred CCceEEeeCCCCCCCCCeeEEEEEECC-CCceEeec-----cCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEE
Confidence 579999998 44433321 113466789999999999 8888888776 89999
Q ss_pred ECCcccccccchhhhccccccCCCcccccccccceeEEEEcC--CCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcc
Q 014644 216 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN--DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 216 d~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
|+.+++... .....+ . ......+..++|+| ||+++++++. +.++||++...+..+..+..+...+
T Consensus 290 d~~~g~~~~---~~~~~~-~--------~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 290 DAETGRFVR---TLFVET-D--------KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEV 357 (706)
T ss_dssp ETTTCCEEE---EEEEEE-C--------SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCE
T ss_pred ECCCCceee---EEEEcc-C--------CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEE
Confidence 998873221 111110 0 00012346789999 9998888765 8888888764356566665554332
Q ss_pred cccccccCCCcceeeeE-EEEcCCCCEEEEeeC-CC----eEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 293 PKLCDLYNNDSIFDKFE-CSVSGDGLHFATGSY-SN----LLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~-~~~sp~~~~l~~~s~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
.+ ++|+|+|+.|+.++. ++ .|+.||+.++. ...+. +...+..+.|+|+
T Consensus 358 ---------------~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~l~-~~~~~~~~~~spd 411 (706)
T 2z3z_A 358 ---------------TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK--TKDLT-PESGMHRTQLSPD 411 (706)
T ss_dssp ---------------EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC--CEESC-CSSSEEEEEECTT
T ss_pred ---------------EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC--ceecc-CCCceEEEEECCC
Confidence 44 799999998766554 44 67777777652 23333 5667888999988
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.2e-18 Score=157.34 Aligned_cols=268 Identities=9% Similarity=0.091 Sum_probs=161.9
Q ss_pred CccccccccccccEEEEEEEEcCCCCeEEEEeC---CCcEEEeecCCceeEEeeec-CCCCCcccccccccccceeeccC
Q 014644 23 EFDYLKSLEIEEKINRVRWCAAPNGSMFILSTN---DKTIKLWKVRDQKVKKIKEM-DHFPFVSSENTLLAEKNFMNEHN 98 (421)
Q Consensus 23 ~~~~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~---d~~v~lwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ 98 (421)
++..+....+......++| +|+++ |++++. ++.|.+|++.+++.+.+... .+.. .+..+++
T Consensus 29 ~~~~~~~~~~~~~p~~~a~--spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~------------~p~~~a~ 93 (347)
T 3hfq_A 29 TLTNDGLLAATQNPTYLAL--SAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT------------PPAYVAV 93 (347)
T ss_dssp EEEEEEEEEECSCCCCEEE--CTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC------------CCSEEEE
T ss_pred eEEEeeeeeccCCcceEEE--ccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCC------------CCEEEEE
Confidence 3444444556677888999 78888 555444 68999999987765444331 1122 2233444
Q ss_pred CCCceeeeecccccccceeEEeecccceeeeeeeecC-C-------CCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC
Q 014644 99 PPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPH-A-------HDFNINSISNNSDCETFVSA-DDLRINLWNLEIS 169 (421)
Q Consensus 99 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~ 169 (421)
++++.++..... ..+.+.+|++........+..+.. + +...+.+++|+|+|+++++. .++.|.+|++...
T Consensus 94 spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 94 DEARQLVYSANY-HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp ETTTTEEEEEET-TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEEeC-CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 455554444332 235688998864322233333311 1 22358899999999966666 7899999999843
Q ss_pred ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEE-EEcCCeEEEEECCc--ccccccchhhhccccccCCCccccccc
Q 014644 170 DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAY-SSSRGFVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEI 246 (421)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s-~~~d~~v~iwd~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~ 246 (421)
+........ . ......+..++|+|+| +++++ ...++.|.+|++.. +... ....+.. .+.. + ..
T Consensus 173 g~~~~~~~~---~-~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~--~~~~~~~---~~~~---~-~~ 238 (347)
T 3hfq_A 173 GQLSEQSVL---T-MEAGFGPRHLVFSPDG-QYAFLAGELSSQIASLKYDTQTGAFT--QLGIVKT---IPAD---Y-TA 238 (347)
T ss_dssp SCEEEEEEE---E-CCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEEETTTTEEE--EEEEEES---SCTT---C-CS
T ss_pred CcEEEeeeE---E-cCCCCCCceEEECCCC-CEEEEEeCCCCEEEEEEecCCCCceE--Eeeeeee---cCCC---C-CC
Confidence 433221100 0 1122356789999999 75555 55789999999874 3211 0011111 0000 0 00
Q ss_pred ccceeEEEEcCCCCEEEE-ecC-CeEEEEECCCCC--cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe
Q 014644 247 IASISDIKFANDGQHLLS-RDY-MNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 322 (421)
Q Consensus 247 ~~~v~~~~~s~~~~~l~~-~~~-~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~ 322 (421)
...+..++|+|||++|++ ... +.|.+|++...+ +.+..+..+.... ..++|+|||++|+++
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~---------------~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP---------------RDFDLDPTEAFVVVV 303 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC---------------CEEEECTTSSEEEEE
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc---------------CeEEECCCCCEEEEE
Confidence 145889999999998854 443 899999996323 2333343333222 689999999998888
Q ss_pred eC-CCeEEEEecCC
Q 014644 323 SY-SNLLRIFSHGV 335 (421)
Q Consensus 323 s~-dg~i~iwd~~~ 335 (421)
+. ++.|.+|+++.
T Consensus 304 ~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 304 NQNTDNATLYARDL 317 (347)
T ss_dssp ETTTTEEEEEEECT
T ss_pred EcCCCcEEEEEEeC
Confidence 76 48999996653
No 152
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=1.8e-18 Score=171.97 Aligned_cols=327 Identities=9% Similarity=-0.029 Sum_probs=190.1
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
......+.| ++++.+++++ |++|++||+.+++...+...+. .....+ ......+++++..++....+.
T Consensus 16 ~~~~~~~~w--~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~Spdg~~l~~~~~~~ 83 (740)
T 4a5s_A 16 RLKLYSLRW--ISDHEYLYKQ--ENNILVFNAEYGNSSVFLENST-FDEFGH-------SINDYSISPDGQFILLEYNYV 83 (740)
T ss_dssp CCCCCCEEE--CSSSEEEEEE--TTEEEEEETTTCCEEEEECTTT-TTTCCS-------CCCEEEECTTSSEEEEEEEEE
T ss_pred cccccccEE--CCCCcEEEEc--CCcEEEEECCCCceEEEEechh-hhhhcc-------cccceEECCCCCEEEEEECCe
Confidence 445668999 6889888886 9999999999988554433221 111111 111234466777666555421
Q ss_pred -------ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCc
Q 014644 113 -------NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDD 185 (421)
Q Consensus 113 -------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 185 (421)
.+.+.+|++.++ ++.+ + ..|...+...+|||||+.||.+.++.|++|++. ++...++. ..+
T Consensus 84 ~~~r~~~~~~~~~~d~~~~---~~~~-l-~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~-~~~~~~lt------~~g 151 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKR---QLIT-E-ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP-NLPSYRIT------WTG 151 (740)
T ss_dssp ECSSSCEEEEEEEEETTTT---EECC-S-SCCCTTEEEEEECSSTTCEEEEETTEEEEESST-TSCCEECC------SCC
T ss_pred eeEEEccceEEEEEECCCC---cEEE-c-ccCCCcceeeEECCCCCEEEEEECCeEEEEECC-CCceEEEc------CCC
Confidence 135678998887 5443 3 567788999999999999999878899999998 44443321 122
Q ss_pred cCCC-----------------eeEEEEecCCCCeEEEEEcCC------------------------------------eE
Q 014644 186 LTEV-----------------ITSAEFHPIYCNLLAYSSSRG------------------------------------FV 212 (421)
Q Consensus 186 ~~~~-----------------v~~~~~~p~~~~~l~s~~~d~------------------------------------~v 212 (421)
+... ..++.||||| +.|++++.|. +|
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l 230 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence 2222 2358999999 8888876443 24
Q ss_pred EEEECCc---ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe----cC-CeEEEEECCCCCc----
Q 014644 213 RLVDMRQ---SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR----DY-MNLKLWDIRMDST---- 280 (421)
Q Consensus 213 ~iwd~~~---~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~-~~i~i~d~~~~~~---- 280 (421)
++||+.+ +.... ...+.. ...+.++...+..++|+|||+.++.. .. ..|++||+.+ ++
T Consensus 231 ~v~d~~~~~~~~~~~--~~~l~~-------~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~ 300 (740)
T 4a5s_A 231 FVVNTDSLSSVTNAT--SIQITA-------PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE-SSGRWN 300 (740)
T ss_dssp EEEETTSCCSSSCCC--EEEECC-------CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET-TTTEEE
T ss_pred EEEECCCCCCCCcce--EEEecC-------CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC-Cccccc
Confidence 4444444 31000 000000 00011256789999999999977653 22 4799999986 54
Q ss_pred c--eeEE--eeccCcccccccccCCCcceeeeEEEEcCCCCEEE-EeeC-C--CeEEEEecCCCCCceeEEecCCCCccc
Q 014644 281 P--VATF--KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSY-S--NLLRIFSHGVGSAGGITVEAGKNENRK 352 (421)
Q Consensus 281 ~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~ 352 (421)
+ +..+ ..+...+.. .....++|+|||+.|+ ..+. + ..|++||+..+ .. ..+......+..
T Consensus 301 ~~~~~~l~~~~~~~~v~~----------~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~-~~-~~lT~g~~~v~~ 368 (740)
T 4a5s_A 301 CLVARQHIEMSTTGWVGR----------FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK-DC-TFITKGTWEVIG 368 (740)
T ss_dssp ECGGGCEEEECSSSCSSS----------SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS-SC-EESCCSSSCEEE
T ss_pred eeEEEEeeeccCCceEcc----------CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC-ce-EecccCCEEEEE
Confidence 1 1222 334333210 0013678999999877 6664 3 46888888765 33 333333334443
Q ss_pred eeeecCCcccccccceeeeecc----cCc-ccC--CCC-Cccc-ccc----ccccCeEEEEEccCCCeEEEecC
Q 014644 353 PILQAAPRARRSSLSNLTRGLY----RQA-HEN--SSS-GHHE-LSY----NLSSKLLHLAWHPTTNLIACANG 413 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~l~~g~~----d~~-~iw--~~~-~~~~-~~~----~~~~~v~~~~~spd~~~la~~~~ 413 (421)
+.. ++ ++ ..++++.. .+. .|| ... .... .+. +....+..++|+|++++++....
T Consensus 369 ~~~-~d--~~----~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s 435 (740)
T 4a5s_A 369 IEA-LT--SD----YLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCS 435 (740)
T ss_dssp EEE-EC--SS----EEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEEC
T ss_pred EEE-Ee--CC----EEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeC
Confidence 332 33 22 13334433 233 677 221 1111 111 12356789999999998876653
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=1.3e-19 Score=168.33 Aligned_cols=172 Identities=10% Similarity=0.035 Sum_probs=120.3
Q ss_pred CcceEEEeecCCCCEEEEE-cCCcEEEEeCCCC-------ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE----E
Q 014644 138 DFNINSISNNSDCETFVSA-DDLRINLWNLEIS-------DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA----Y 205 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~----s 205 (421)
...++.+++++++.+++++ .++ +++|+.... ..........+.....+...|.+++|+|++ ++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEEEEec
Confidence 3468899999999999998 776 999875410 000001100000012355679999999999 8888 7
Q ss_pred EEcCCeEEEEECCcccccc-cchhhhccccccCCCcccccccccceeEEEEcCC-CCEEEEecC-CeEEEEECCCCCcce
Q 014644 206 SSSRGFVRLVDMRQSALCD-HSARILRDAAESHGSKSFFTEIIASISDIKFAND-GQHLLSRDY-MNLKLWDIRMDSTPV 282 (421)
Q Consensus 206 ~~~d~~v~iwd~~~~~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~-~~i~i~d~~~~~~~~ 282 (421)
++.|+.|++||+.++.... +..+.+ .....+.+|...|.+++|+|+ +.+|++++. ++|++||+++ +..+
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~-------~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~~~~ 185 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPF-------AYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-TVKV 185 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCS-------EEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-SEEE
T ss_pred cCCCceEEEEEccccccCCcCCccee-------eeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-Ccce
Confidence 7889999999987641000 000000 001123456889999999998 788998865 9999999986 5555
Q ss_pred eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 283 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
....+|...+ .+++|+|+|++|++|+.||.|++||++
T Consensus 186 ~~~~~~~~~v---------------~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 186 CATLPSTVAV---------------TSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEECGGGCE---------------EEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred eeccCCCCce---------------eEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 4555555543 799999999999999999999999988
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=4.7e-17 Score=147.77 Aligned_cols=220 Identities=9% Similarity=0.050 Sum_probs=136.9
Q ss_pred cccccccccccEEEEEEEEcCCCCeEEEEeCC----CcEEEeecCC--ceeEEeeecCCCCCcccccccccccceeeccC
Q 014644 25 DYLKSLEIEEKINRVRWCAAPNGSMFILSTND----KTIKLWKVRD--QKVKKIKEMDHFPFVSSENTLLAEKNFMNEHN 98 (421)
Q Consensus 25 ~~~~~~~h~~~V~~v~~~~~~~~~~l~t~s~d----~~v~lwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 98 (421)
..+... +......++| +|++++|++++.+ +.|.+|+++. +++..+.
T Consensus 42 ~~~~~~-~~~~p~~l~~--spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~------------------------- 93 (361)
T 3scy_A 42 LPLSDA-EVANPSYLIP--SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN------------------------- 93 (361)
T ss_dssp EEEEEE-ECSCCCSEEE--CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE-------------------------
T ss_pred EEeecc-cCCCCceEEE--CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee-------------------------
Confidence 333334 6667788899 7999999998886 7999999865 3322221
Q ss_pred CCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeee
Q 014644 99 PPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIV 176 (421)
Q Consensus 99 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~ 176 (421)
.. ..+......+++ ++++|+++ .+++|.+|++...+......
T Consensus 94 ---------------------------------~~-~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 137 (361)
T 3scy_A 94 ---------------------------------TQ-KTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPAS 137 (361)
T ss_dssp ---------------------------------EE-ECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCS
T ss_pred ---------------------------------Ee-ccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccc
Confidence 11 223345566777 78877765 68999999997443322111
Q ss_pred ---ecC---CCCCCccCCCeeEEEEecCCCCeEEEEE-cCCeEEEEECCcccc------cccc--hhhhccccccCCCcc
Q 014644 177 ---DMK---PSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSAL------CDHS--ARILRDAAESHGSKS 241 (421)
Q Consensus 177 ---~~~---~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd~~~~~~------~~~~--~~~~~~h~~~~~~~~ 241 (421)
... +.....+...+.+++|+|++ +++++++ .++.|++|++..... .... ......
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~--------- 207 (361)
T 3scy_A 138 DVIEFKGSGPDKERQTMPHLHCVRITPDG-KYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV--------- 207 (361)
T ss_dssp EEEECCCCCSCTTTCSSCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC---------
T ss_pred eeEEccCCCCCccccCCCcceEEEECCCC-CEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec---------
Confidence 000 00012233456889999999 7665555 589999999875431 1000 000000
Q ss_pred cccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcce--eEEeeccCcccccccccCCCcceeeeEEEEcCCCC
Q 014644 242 FFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPV--ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 317 (421)
Q Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 317 (421)
.....+..++|+|||+++++++ . +.|.+|++.+ ++.. ..+....... .....++|+|||+
T Consensus 208 ---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~------------~~~~~i~~spdg~ 271 (361)
T 3scy_A 208 ---APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNA------------QGSGDIHLSPDGK 271 (361)
T ss_dssp ---CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCC------------CCEEEEEECTTSS
T ss_pred ---CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCC------------CCcccEEECCCCC
Confidence 1134567899999999887664 3 8999999974 5432 2222111100 0115899999999
Q ss_pred EEEEeeC--CCeEEEEecC
Q 014644 318 HFATGSY--SNLLRIFSHG 334 (421)
Q Consensus 318 ~l~~~s~--dg~i~iwd~~ 334 (421)
+|+++.. ++.|.+|++.
T Consensus 272 ~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 272 YLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEECSSSCEEEEEEEC
T ss_pred EEEEECCCCCCEEEEEEEc
Confidence 9877665 4899999996
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=6.4e-18 Score=152.48 Aligned_cols=288 Identities=9% Similarity=-0.012 Sum_probs=166.2
Q ss_pred cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecc
Q 014644 44 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 123 (421)
Q Consensus 44 ~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 123 (421)
++++.++++++.+++|++||..+++......
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~------------------------------------------------- 38 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCV------------------------------------------------- 38 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEE-------------------------------------------------
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEe-------------------------------------------------
Confidence 5678899999999999999998875221110
Q ss_pred cceeeeeeeecCCCCcceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCC
Q 014644 124 SVHARCQKVYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCN 201 (421)
Q Consensus 124 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 201 (421)
.+....+..++|+|++++++. + .++.|.+||+. .++....+..... -......+.+++|+|++ +
T Consensus 39 -----------~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~-t~~~~~~~~~~~~-~~~~~~~~~~~~~spdg-~ 104 (349)
T 1jmx_B 39 -----------MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD-TCKNTFHANLSSV-PGEVGRSMYSFAISPDG-K 104 (349)
T ss_dssp -----------CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT-TTEEEEEEESCCS-TTEEEECSSCEEECTTS-S
T ss_pred -----------cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC-CCcEEEEEEcccc-cccccccccceEECCCC-C
Confidence 111124678899999986654 5 78999999998 4555544321100 00002347889999999 8
Q ss_pred eEEEEEcC------------CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCe
Q 014644 202 LLAYSSSR------------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMN 269 (421)
Q Consensus 202 ~l~s~~~d------------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 269 (421)
+|++++.+ +.|.+||+.+++... ....+.. ...+.+++|+|+|+ +++++ +.
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~--------------~~~~~~~~~s~dg~-l~~~~-~~ 167 (349)
T 1jmx_B 105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-PVRTFPM--------------PRQVYLMRAADDGS-LYVAG-PD 167 (349)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-CSEEEEC--------------CSSCCCEEECTTSC-EEEES-SS
T ss_pred EEEEEcccccccccccccCCCeEEEEECCCccccc-eeeeccC--------------CCcccceeECCCCc-EEEcc-Cc
Confidence 88888765 899999998754321 1111111 33578899999999 55443 45
Q ss_pred EEEEECCCCCcceeEEeeccCccccc------c--cccCCCcc-eeeeEEEEcCCCCEEEEeeCCC-eEEEEecCCCCCc
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKL------C--DLYNNDSI-FDKFECSVSGDGLHFATGSYSN-LLRIFSHGVGSAG 339 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~-~~~~~~~~sp~~~~l~~~s~dg-~i~iwd~~~~~~~ 339 (421)
|++||+.+ ++.+..+..+....+.. . ........ .....+++++++.......... .+..++..++...
T Consensus 168 i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 168 IYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp EEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred EEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 99999986 77666654332100000 0 00000000 0113466666542211111111 1222444444322
Q ss_pred eeEEecCCCCccceeeec-CCcccccccceeeeecccCc-ccCCCC-CccccccccccCeEEEEEccCCCeEEEec-CCc
Q 014644 340 GITVEAGKNENRKPILQA-APRARRSSLSNLTRGLYRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNLIACAN-GNS 415 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~ 415 (421)
...+..+......++++| + ++ .++.+ ++. .+|+.. ............+..++|+||++.|++++ ++.
T Consensus 247 ~~~~~~~~~~~~~~~~sp~d--g~-----~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKD--PN-----QIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp EEEEEECSSCEEEEEECSSC--TT-----EEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSE
T ss_pred ecccccCCCcceeeEecCCC--CC-----EEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCe
Confidence 333333455566778888 6 33 66666 556 888432 22222333445678999999999888776 667
Q ss_pred eEEEeC
Q 014644 416 LFFHYA 421 (421)
Q Consensus 416 ~~i~~~ 421 (421)
+.+|+.
T Consensus 318 v~v~d~ 323 (349)
T 1jmx_B 318 LAVFNP 323 (349)
T ss_dssp EEEEET
T ss_pred EEEEec
Confidence 999974
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=1.5e-17 Score=149.18 Aligned_cols=251 Identities=11% Similarity=0.057 Sum_probs=164.4
Q ss_pred cEEEEEEEEcCCCCeE-EEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc---
Q 014644 35 KINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW--- 110 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l-~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 110 (421)
.+..++| +|+++++ ++++.++.|.+||+.+++............ ....+..+.+++++..+..+..
T Consensus 35 ~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~~~ 104 (337)
T 1pby_B 35 TPMVPMV--APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE--------RVKSLFGAALSPDGKTLAIYESPVR 104 (337)
T ss_dssp CCCCEEE--CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE--------EEECTTCEEECTTSSEEEEEEEEEE
T ss_pred CccceEE--cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc--------ccccccceEECCCCCEEEEEecccc
Confidence 5788999 7888765 555668899999998887433222111100 0011223344445544443321
Q ss_pred -----c--cccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCC
Q 014644 111 -----T--ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 111 -----~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
. ....+.+|+..+. +.++.+ .. ...+.+++|+|++++|+++ ++.|.+||+. .++....+..
T Consensus 105 ~~~~~~~~~~~~i~v~d~~~~---~~~~~~-~~-~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~-~~~~~~~~~~----- 172 (337)
T 1pby_B 105 LELTHFEVQPTRVALYDAETL---SRRKAF-EA-PRQITMLAWARDGSKLYGL-GRDLHVMDPE-AGTLVEDKPI----- 172 (337)
T ss_dssp ECSSCEEECCCEEEEEETTTT---EEEEEE-EC-CSSCCCEEECTTSSCEEEE-SSSEEEEETT-TTEEEEEECS-----
T ss_pred cccccccccCceEEEEECCCC---cEEEEE-eC-CCCcceeEECCCCCEEEEe-CCeEEEEECC-CCcEeeeeec-----
Confidence 0 2467889998776 555555 22 4467889999999988888 6789999998 5555544421
Q ss_pred CccCCCeeEEEEecCCCCeEEEEE-cCC-----------------------eEEEEECCcccccccchhhhccccccCCC
Q 014644 184 DDLTEVITSAEFHPIYCNLLAYSS-SRG-----------------------FVRLVDMRQSALCDHSARILRDAAESHGS 239 (421)
Q Consensus 184 ~~~~~~v~~~~~~p~~~~~l~s~~-~d~-----------------------~v~iwd~~~~~~~~~~~~~~~~h~~~~~~ 239 (421)
..+.. .+.|+|++ ..++..+ .++ .|.+||+.+++.. ...+.
T Consensus 173 ~~~~~---~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~-------- 237 (337)
T 1pby_B 173 QSWEA---ETYAQPDV-LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVR-------- 237 (337)
T ss_dssp TTTTT---TTBCCCBC-CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEE--------
T ss_pred cccCC---CceeCCCc-cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecC--------
Confidence 11112 23688998 5444333 333 4688998876532 01111
Q ss_pred cccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEE
Q 014644 240 KSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHF 319 (421)
Q Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 319 (421)
.+...+..++|+|||++++++ ++.|++||+.+ ++.+..+..+... .+++|+|+|++|
T Consensus 238 -----~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l 294 (337)
T 1pby_B 238 -----IMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEK-NASIKRVPLPHSY----------------YSVNVSTDGSTV 294 (337)
T ss_dssp -----ECSSCEEEEEECTTSSEEEEE-ESEEEEEETTT-TEEEEEEECSSCC----------------CEEEECTTSCEE
T ss_pred -----CCCCceeeEEECCCCCEEEEe-CCeEEEEECCC-CcCcceecCCCce----------------eeEEECCCCCEE
Confidence 124567889999999999888 58999999986 7777666544332 589999999999
Q ss_pred EEeeCCCeEEEEecCCCCCceeEEecC
Q 014644 320 ATGSYSNLLRIFSHGVGSAGGITVEAG 346 (421)
Q Consensus 320 ~~~s~dg~i~iwd~~~~~~~~~~~~~~ 346 (421)
++++.++.|++||+.++ .....+..+
T Consensus 295 ~~~~~~~~i~v~d~~~~-~~~~~~~~~ 320 (337)
T 1pby_B 295 WLGGALGDLAAYDAETL-EKKGQVDLP 320 (337)
T ss_dssp EEESBSSEEEEEETTTC-CEEEEEECG
T ss_pred EEEcCCCcEEEEECcCC-cEEEEEEcC
Confidence 99999999999999987 444444433
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.80 E-value=8.1e-17 Score=146.44 Aligned_cols=260 Identities=9% Similarity=-0.009 Sum_probs=159.7
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCCCcEEEeecC-CceeEEeeecCCCCCcccccccccccceeeccCCCCcee--eeecc-
Q 014644 34 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVR-DQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAH--GYHLE- 109 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~g~- 109 (421)
..+..++| +|++++|++++.+ .|.+|++. ++++.........+.... +.+++++.+ +....
T Consensus 40 ~~~~~~a~--spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~------------~~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 40 EPISWMTF--DHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRA------------NDADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCCSEEEE--CTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGG------------GCTTSCCEEEEEEECSS
T ss_pred CCCcEEEE--CCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCcc------------EEECCCCCEEEEEEecC
Confidence 46788999 7999999998888 99999997 666443322111122233 334444442 22221
Q ss_pred -----cc-----cccceeEEeecc-cceeeeeeeecCCCCcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeee
Q 014644 110 -----WT-----ENMATKIANVGN-SVHARCQKVYPHAHDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIV 176 (421)
Q Consensus 110 -----~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~ 176 (421)
.. ..+.+.+|++.. +.....+..+...+...+.+++|+|||++|+++ .++.|++|+++..++.....
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~ 184 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVG 184 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEee
Confidence 10 245678998863 311122222212356679999999999988876 57899999997223222111
Q ss_pred ecCCCCCCccCCCeeEEEEecCCCCeEEEEEc-CCeEEEEECC--cccccc--cchhhhccccccCCCccccccccc---
Q 014644 177 DMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RGFVRLVDMR--QSALCD--HSARILRDAAESHGSKSFFTEIIA--- 248 (421)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-d~~v~iwd~~--~~~~~~--~~~~~~~~h~~~~~~~~~~~~~~~--- 248 (421)
.. .+..|...+..++|+|+| +++++++. ++.|.+|++. +++... .....+.. -+.++..
T Consensus 185 ~~---~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~---------~~~g~~~~~~ 251 (365)
T 1jof_A 185 SV---DAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP---------GIPDRDPETG 251 (365)
T ss_dssp EE---ECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT---------TCCCBCTTTS
T ss_pred eE---ecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC---------CcCCcccccc
Confidence 00 111234668999999999 88877764 7899999875 333210 00111111 0011122
Q ss_pred ---ceeEEE-EcCCCCEEEEecC--C-----eEEEEECCCCCcceeE---EeeccCcccccccccCCCcceeeeEEEEcC
Q 014644 249 ---SISDIK-FANDGQHLLSRDY--M-----NLKLWDIRMDSTPVAT---FKIHEHLRPKLCDLYNNDSIFDKFECSVSG 314 (421)
Q Consensus 249 ---~v~~~~-~s~~~~~l~~~~~--~-----~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 314 (421)
.+..++ |+|||++|++++. + .|.+|++...++.... ...+.... ..++|+|
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~---------------~~~a~sp 316 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG---------------HSNAVSP 316 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT---------------TCCCEEE
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc---------------ccceecC
Confidence 578999 9999998876542 3 8999999632544321 22222211 4789999
Q ss_pred ---CCCEEEEeeCC-CeEEEEecCCC
Q 014644 315 ---DGLHFATGSYS-NLLRIFSHGVG 336 (421)
Q Consensus 315 ---~~~~l~~~s~d-g~i~iwd~~~~ 336 (421)
+|++|++++.+ +.|.+|+++..
T Consensus 317 ~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 317 CPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89999988864 89999998764
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1.6e-17 Score=152.28 Aligned_cols=269 Identities=10% Similarity=0.025 Sum_probs=163.3
Q ss_pred EEEEEcCCCCeEEEEeC-CCc--EEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccc
Q 014644 39 VRWCAAPNGSMFILSTN-DKT--IKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMA 115 (421)
Q Consensus 39 v~~~~~~~~~~l~t~s~-d~~--v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 115 (421)
.+| +|||++|+.++. ++. |.+||+.+++...+
T Consensus 41 ~~~--SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l------------------------------------------- 75 (388)
T 3pe7_A 41 KCF--TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL------------------------------------------- 75 (388)
T ss_dssp CCB--CTTSCEEEEEECTTSSCEEEEEETTTCEEEEC-------------------------------------------
T ss_pred ccC--CCCCCEEEEEEcCCCCceEEEEeCCCCceEEe-------------------------------------------
Confidence 678 799999998887 674 77778777653222
Q ss_pred eeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEE
Q 014644 116 TKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
. .++...+..++|+|||+.|+.+ .++.|++||+. +++...+. ..+...+....
T Consensus 76 -----------------t-~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~-~g~~~~~~-------~~~~~~~~~~~ 129 (388)
T 3pe7_A 76 -----------------T-EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLA-TLEENVVY-------QVPAEWVGYGT 129 (388)
T ss_dssp -----------------C-CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETT-TCCEEEEE-------ECCTTEEEEEE
T ss_pred -----------------e-eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECC-CCcceeee-------echhhcccccc
Confidence 1 3444455567899999999998 88899999998 44444333 22333343333
Q ss_pred --EecCCCCeEEEEE----------------------cCCeEEEEECCcccccccchhhhccccccCCCcccccccccce
Q 014644 195 --FHPIYCNLLAYSS----------------------SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 195 --~~p~~~~~l~s~~----------------------~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v 250 (421)
++|++ ..++... .+..|.+||+.+++.. .+... ...+
T Consensus 130 ~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~----~l~~~--------------~~~~ 190 (388)
T 3pe7_A 130 WVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST----VILQE--------------NQWL 190 (388)
T ss_dssp EEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE----EEEEE--------------SSCE
T ss_pred eeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE----EeecC--------------Cccc
Confidence 48998 7776432 3467999999886532 22222 4568
Q ss_pred eEEEEcC-CCCEEEEecC-------CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe
Q 014644 251 SDIKFAN-DGQHLLSRDY-------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 322 (421)
Q Consensus 251 ~~~~~s~-~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~ 322 (421)
..++|+| ||+.|+.... ..|.++|+.. +. ...+..+.... .+..++|+|||+.|+..
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~-------------~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG-TN-MRKVKTHAEGE-------------SCTHEFWVPDGSALVYV 255 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS-CC-CEESCCCCTTE-------------EEEEEEECTTSSCEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC-Cc-eEEeeeCCCCc-------------ccccceECCCCCEEEEE
Confidence 8999999 9998886532 2677777753 33 33333322100 11578999999987654
Q ss_pred eC-CC----eEEEEecCCCCCce-eEEecCC---CCccceeeecCCcccccccceeeeec---------ccCc-ccCCC-
Q 014644 323 SY-SN----LLRIFSHGVGSAGG-ITVEAGK---NENRKPILQAAPRARRSSLSNLTRGL---------YRQA-HENSS- 382 (421)
Q Consensus 323 s~-dg----~i~iwd~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~g~---------~d~~-~iw~~- 382 (421)
+. ++ .|++||+.++.... ..+.++. .......|+|+ |+ .|+... .+.. .+|+.
T Consensus 256 ~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spd--g~-----~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 256 SYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD--GS-----DAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp EEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEE--EC-----CC------------CCCCEEEEEETT
T ss_pred ecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccC--CC-----cceeEeeeccccccCCCCEEEEEecc
Confidence 43 22 39999999874321 2222210 01233478888 43 455432 2223 55633
Q ss_pred CCcccccccccc-----------CeEEEEEccCCCeEEEec--CCceEEE
Q 014644 383 SGHHELSYNLSS-----------KLLHLAWHPTTNLIACAN--GNSLFFH 419 (421)
Q Consensus 383 ~~~~~~~~~~~~-----------~v~~~~~spd~~~la~~~--~~~~~i~ 419 (421)
++....+..+.. .+..++|+|||+.|+.++ .+...||
T Consensus 329 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 329 NGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp TTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 233333333433 478899999999998776 3444444
No 159
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=9.8e-17 Score=144.97 Aligned_cols=249 Identities=10% Similarity=0.042 Sum_probs=165.5
Q ss_pred cccccccccEEEEEEEEcCCCCeE-EEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 27 LKSLEIEEKINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 27 ~~~~~h~~~V~~v~~~~~~~~~~l-~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
+..+.....+..+.| +++++++ +++..++.|.+||..+++............-. . ........+.+++++..+
T Consensus 82 ~~~~~~~~~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~s~dg~~l 155 (353)
T 3vgz_A 82 TQAIHNDLKPFGATI--NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTE---E-VRPLQPRELVADDATNTV 155 (353)
T ss_dssp EEEEEESSCCCSEEE--ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCS---S-CCCCEEEEEEEETTTTEE
T ss_pred EEEEecCCCcceEEE--CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcccc---c-cCCCCCceEEECCCCCEE
Confidence 334444556788899 6888854 55566899999999988743332221111000 0 000013344455555544
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 184 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 184 (421)
..........+.+|+..+. +.++.+ ..+...+.+++|+|++++|+++ .++.|.+||+. .++....+... ..
T Consensus 156 ~~~~~~~~~~i~~~d~~~~---~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~-~~~~~~~~~~~---~~ 227 (353)
T 3vgz_A 156 YISGIGKESVIWVVDGGNI---KLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELITIDTA-DNKILSRKKLL---DD 227 (353)
T ss_dssp EEEEESSSCEEEEEETTTT---EEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT-TTEEEEEEECC---CS
T ss_pred EEEecCCCceEEEEcCCCC---ceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEEEECC-CCeEEEEEEcC---CC
Confidence 4444333456888998876 666666 4456668899999999999998 89999999998 55555544221 12
Q ss_pred ccCCCeeEEEEecCCCCeEEEEE-cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEE
Q 014644 185 DLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLL 263 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 263 (421)
++...+.+++|+|++ +.++.++ .++.|.+||+.+++.. ..+.. .....++|+|+|++++
T Consensus 228 ~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~----~~~~~---------------~~~~~~~~s~dg~~l~ 287 (353)
T 3vgz_A 228 GKEHFFINISLDTAR-QRAFITDSKAAEVLVVDTRNGNIL----AKVAA---------------PESLAVLFNPARNEAY 287 (353)
T ss_dssp SSCCCEEEEEEETTT-TEEEEEESSSSEEEEEETTTCCEE----EEEEC---------------SSCCCEEEETTTTEEE
T ss_pred CCCcccceEEECCCC-CEEEEEeCCCCEEEEEECCCCcEE----EEEEc---------------CCCceEEECCCCCEEE
Confidence 345567889999999 7666555 4599999999887643 22222 1125699999999766
Q ss_pred Ee-cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCC
Q 014644 264 SR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSN 326 (421)
Q Consensus 264 ~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg 326 (421)
.+ .. +.|.+||+.+ ++.+..+...... .+++|+|+|++|+++..++
T Consensus 288 v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~----------------~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 288 VTHRQAGKVSVIDAKS-YKVVKTFDTPTHP----------------NSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEETTT-TEEEEEEECCSEE----------------EEEEECTTSCEEEEEEECC
T ss_pred EEECCCCeEEEEECCC-CeEEEEEecCCCC----------------CeEEEcCCCCEEEEEEccc
Confidence 54 34 9999999986 7777777654432 6899999999887776554
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=5e-18 Score=168.60 Aligned_cols=261 Identities=10% Similarity=0.033 Sum_probs=165.9
Q ss_pred ccceeEEeecccceeeeeeeecCCCCc---ceEEEeecCCCCEEEEE-c---------CCcEEEEeCCCCceeeeeeecC
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDF---NINSISNNSDCETFVSA-D---------DLRINLWNLEISDQCFNIVDMK 179 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~~~~~~l~s~-~---------d~~i~lwd~~~~~~~~~~~~~~ 179 (421)
++.+.+|+..++ ++.+.+ .+|.. .+.+++|||||++|+++ . ++.|++||+. +++.....
T Consensus 35 d~~i~~~~~~~g---~~~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~-~g~~~~~~--- 106 (719)
T 1z68_A 35 DNNIVLYNIETG---QSYTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS-NGEFVRGN--- 106 (719)
T ss_dssp TSCEEEEESSSC---CEEEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT-TTEECCSS---
T ss_pred CCCEEEEEcCCC---cEEEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC-CCccccce---
Confidence 558999999887 666655 45544 38999999999999987 5 6899999998 45442111
Q ss_pred CCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhh-ccccccCCCccccccccc---------c
Q 014644 180 PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARIL-RDAAESHGSKSFFTEIIA---------S 249 (421)
Q Consensus 180 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~---------~ 249 (421)
.+ ...+.+++|+||| +.|+++. ++.|++||+.++... ++. ..+ ....+.++.. .
T Consensus 107 --~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~----~l~~~~~-----~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 107 --EL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPF----QITFNGR-----ENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp --CC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCE----ECCCCCB-----TTTEEESSCCHHHHHHTTCS
T ss_pred --ec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcE----EEecCCC-----cCCeEcccccceeeeecccC
Confidence 11 2458889999999 8888875 789999999876532 111 110 0001112221 2
Q ss_pred eeEEEEcCCCCEEEEecC--C---------------------------------eEEEEECCCCCcce--eEE------e
Q 014644 250 ISDIKFANDGQHLLSRDY--M---------------------------------NLKLWDIRMDSTPV--ATF------K 286 (421)
Q Consensus 250 v~~~~~s~~~~~l~~~~~--~---------------------------------~i~i~d~~~~~~~~--~~~------~ 286 (421)
..+++|+|||++|++++. + .|++||+.+ ++.. ..+ .
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHH
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCC
Confidence 258999999999997642 1 788888875 4432 111 1
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC----CeEEEEe----cCCCCCceeEE----ecCCCCcc---
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS----NLLRIFS----HGVGSAGGITV----EAGKNENR--- 351 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d----g~i~iwd----~~~~~~~~~~~----~~~~~~~~--- 351 (421)
.+... +.+++|+||++++++.... ..|++|| +.++ .....+ .+|...+.
T Consensus 250 ~~~~~---------------~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 313 (719)
T 1z68_A 250 SSDYY---------------FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-DCPKTQEHIEESRTGWAGGFF 313 (719)
T ss_dssp TSCEE---------------EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-ECCGGGEEEEECSSSCSSSSS
T ss_pred CCcce---------------EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-ceEEEEecccccCCceEcccc
Confidence 12221 2689999998877774432 3488899 7665 333333 46777776
Q ss_pred --ceeeecCCcccccccceeeeecccCc-ccC--CC-CCccccccccccCeEEEEEccCCCeEEEecC------CceEEE
Q 014644 352 --KPILQAAPRARRSSLSNLTRGLYRQA-HEN--SS-SGHHELSYNLSSKLLHLAWHPTTNLIACANG------NSLFFH 419 (421)
Q Consensus 352 --~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~-~~~~~~~~~~~~~v~~~~~spd~~~la~~~~------~~~~i~ 419 (421)
.+.|+|+ ++ .-.+++...++. .|| +. ++....+......|..+.++ +++.|+..+. +...+|
T Consensus 314 ~~~~~~spd--g~---~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 314 VSTPVFSYD--AI---SYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY 387 (719)
T ss_dssp CCCCEECTT--SS---CEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred CCccEECCC--CC---eEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence 7899988 43 112334556666 666 32 22333344445567787777 8887776653 346666
Q ss_pred e
Q 014644 420 Y 420 (421)
Q Consensus 420 ~ 420 (421)
.
T Consensus 388 ~ 388 (719)
T 1z68_A 388 R 388 (719)
T ss_dssp E
T ss_pred E
Confidence 4
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=4.1e-18 Score=164.96 Aligned_cols=227 Identities=8% Similarity=0.026 Sum_probs=156.8
Q ss_pred CCcceEEEeecCCCCEEEEE-c-CCcEEEEeCCCCceeeeeeecCCCCCCccC-CCeeEEEEecCCCCeEEEEEc---CC
Q 014644 137 HDFNINSISNNSDCETFVSA-D-DLRINLWNLEISDQCFNIVDMKPSNMDDLT-EVITSAEFHPIYCNLLAYSSS---RG 210 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~s~-~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~---d~ 210 (421)
+..+|.+++|+|||+.||++ . |++++||+++ +++..++ ..+. ..+.+++|+|+ +++++++. +.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~-~g~~~~l--------t~~~~~~~~~~~~spd--~~l~~~~~~~g~~ 88 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYD-GGETVKL--------NREPINSVLDPHYGVG--RVILVRDVSKGAE 88 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEE-TTEEEEC--------CSSCCSEECEECTTCS--EEEEEEECSTTSC
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEc-CCCcEee--------ecccccccccccCCCC--eEEEEeccCCCCc
Confidence 35579999999999999986 4 9999999986 5554433 3344 57999999998 57776665 45
Q ss_pred eEEEEECCc--ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCE--EEEecCCeEEEEECCCCCcceeEEe
Q 014644 211 FVRLVDMRQ--SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH--LLSRDYMNLKLWDIRMDSTPVATFK 286 (421)
Q Consensus 211 ~v~iwd~~~--~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~~~~~~i~i~d~~~~~~~~~~~~ 286 (421)
..++|.+.. .... ..+.. ...+...+|+|||+. ++++..+.+.+||+.+ ++......
T Consensus 89 ~~~l~~~~~~~~g~~----~~l~~--------------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g~~~~l~~ 149 (582)
T 3o4h_A 89 QHALFKVNTSRPGEE----QRLEA--------------VKPMRILSGVDTGEAVVFTGATEDRVALYALDG-GGLRELAR 149 (582)
T ss_dssp CEEEEEEETTSTTCC----EECTT--------------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEET-TEEEEEEE
T ss_pred ceEEEEEeccCCCcc----ccccC--------------CCCceeeeeCCCCCeEEEEecCCCCceEEEccC-CcEEEeec
Confidence 566665543 2111 11111 112345688888764 4444556666999986 65444333
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC----CeEEEEecCCCCCceeEEecCCCCccceeeecCCccc
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS----NLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRAR 362 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+. .+++|+|||++|++++.+ +.|++||+.++. ...+..|...+..++|+|+ |+
T Consensus 150 ~~~------------------~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpD--G~ 207 (582)
T 3o4h_A 150 LPG------------------FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPG--MK 207 (582)
T ss_dssp ESS------------------CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTT--SC
T ss_pred CCC------------------ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--ceEeecCCCccccceECCC--CC
Confidence 222 378999999999988876 789999998763 3467888888999999999 44
Q ss_pred ccccceeeeecccCc---ccCCCC-CccccccccccCeEEEE--------EccCCCeEEEec-CCceEEEe
Q 014644 363 RSSLSNLTRGLYRQA---HENSSS-GHHELSYNLSSKLLHLA--------WHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 363 ~~~~~~l~~g~~d~~---~iw~~~-~~~~~~~~~~~~v~~~~--------~spd~~~la~~~-~~~~~i~~ 420 (421)
.|+++..++. .+|+.. +......++...+..++ |+|||.++++++ ++.+.+|.
T Consensus 208 -----~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 208 -----VTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp -----EEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred -----EEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 7887777873 556322 22224445666666667 999998777777 56688886
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=1.6e-16 Score=156.27 Aligned_cols=228 Identities=11% Similarity=-0.021 Sum_probs=137.1
Q ss_pred cCCCCE-EEEE--cCCcEEEEeCCC-C-ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC----------Ce
Q 014644 147 NSDCET-FVSA--DDLRINLWNLEI-S-DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR----------GF 211 (421)
Q Consensus 147 ~~~~~~-l~s~--~d~~i~lwd~~~-~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----------~~ 211 (421)
||||+. |+.+ .+..|.+|++.. + +....+.. .....|...+.+++|+||| +.|++++.+ ..
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~---~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTP---VSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSC---CCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccC---CccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeE
Confidence 499998 7776 355566666540 1 22222110 0001156678899999999 889888876 58
Q ss_pred EEEEECCc------ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C--------CeEEEEECC
Q 014644 212 VRLVDMRQ------SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y--------MNLKLWDIR 276 (421)
Q Consensus 212 v~iwd~~~------~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~--------~~i~i~d~~ 276 (421)
|++||+.+ +... .+... +...+..++|+|||++|+..+ + ..|++||+.
T Consensus 163 i~~~~~~~~~~~~~~~~~----~l~~~-------------~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVR----ELSDD-------------AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp EEEEETTSTTTTCGGGSE----ESSCS-------------CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred EEEEECCCCccccCCcee----EEEec-------------CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 99999987 4321 11101 145678899999999998654 2 379999997
Q ss_pred CCC---cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCC--eEEEEecCCCCCceeEEecCCCC--
Q 014644 277 MDS---TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSN--LLRIFSHGVGSAGGITVEAGKNE-- 349 (421)
Q Consensus 277 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg--~i~iwd~~~~~~~~~~~~~~~~~-- 349 (421)
..+ +.......+...+ ..++|+|||+++++++.++ .|++||+.++ .....+..+...
T Consensus 226 ~~g~~~~~~~l~~~~~~~~---------------~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~-~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 226 EDGRFADTRTLLGGPEEAI---------------AQAEWAPDGSLIVATDRTGWWNLHRVDPATG-AATQLCRREEEFAG 289 (662)
T ss_dssp TTSCEEEEEEEEEETTBCE---------------EEEEECTTSCEEEEECTTSSCEEEEECTTTC-CEEESSCCSSBSSC
T ss_pred CCCcccccEEeCCCCCceE---------------cceEECCCCeEEEEECCCCCeEEEEEECCCC-ceeecccccccccC
Confidence 324 3333333333322 6899999999888888888 6666666554 333333333222
Q ss_pred ------ccceeeecCCcccccccceeeeecccCc-ccC--CC-CCccccccccccCeEEEEEccCCCeEE--EecCC---
Q 014644 350 ------NRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SS-SGHHELSYNLSSKLLHLAWHPTTNLIA--CANGN--- 414 (421)
Q Consensus 350 ------~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~-~~~~~~~~~~~~~v~~~~~spd~~~la--~~~~~--- 414 (421)
+..++++++ ++ .++++.. +. +|| +. ++....+..+...+..+ |++++..++ +++.+
T Consensus 290 p~w~~~~~~~~~~~~--~~-----~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~ 360 (662)
T 3azo_A 290 PLWTPGMRWFAPLAN--GL-----IAVVHGK-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAY 360 (662)
T ss_dssp CCCSTTCCSEEECTT--SC-----EEEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEE
T ss_pred ccccccCceEeEeCC--CE-----EEEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCC
Confidence 345666665 33 7777777 77 999 32 33344444555666665 255555444 33433
Q ss_pred ceEEEe
Q 014644 415 SLFFHY 420 (421)
Q Consensus 415 ~~~i~~ 420 (421)
.++.++
T Consensus 361 ~i~~~d 366 (662)
T 3azo_A 361 EVVELD 366 (662)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 355544
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=1.8e-15 Score=137.58 Aligned_cols=270 Identities=9% Similarity=-0.039 Sum_probs=150.8
Q ss_pred eEEEEeCC--CcEEEeec--CCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeec-c
Q 014644 49 MFILSTND--KTIKLWKV--RDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVG-N 123 (421)
Q Consensus 49 ~l~t~s~d--~~v~lwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~ 123 (421)
++++|+.. +.|.+|++ .++++..+....... ...+..+++++++.++.....+ .+.+|++. +
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~----------~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~ 70 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQ----------DEPISWMTFDHERKNIYGAAMK---KWSSFAVKSP 70 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCT----------TCCCSEEEECTTSSEEEEEEBT---EEEEEEEEET
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCC----------CCCCcEEEECCCCCEEEEEccc---eEEEEEECCC
Confidence 34555543 56888775 455554443211010 0123344555666655554443 68899886 4
Q ss_pred cceeeeeeeec-CCCCcceEEEeecCCCCE--EEEE--------------cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 124 SVHARCQKVYP-HAHDFNINSISNNSDCET--FVSA--------------DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 124 ~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~--l~s~--------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
+ +..+... ..+ +.+..++|+|+|++ ++++ .++++.+|++...++....+.... ..+
T Consensus 71 g---~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~---~~~ 143 (365)
T 1jof_A 71 T---EIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE---YQE 143 (365)
T ss_dssp T---EEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE---CCT
T ss_pred C---CEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE---eCC
Confidence 4 3332220 111 23567899999995 4343 478999999974444433321100 124
Q ss_pred CCCeeEEEEecCCCCeEEEEE-cCCeEEEEECC-cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 187 TEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMR-QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
...+.+++|+|+| ++|+++. .++.|++||+. +++... ...+.. ..+...+..++|+|||+++++
T Consensus 144 ~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~--~~~~~~-----------~~~g~~p~~~~~spdg~~l~v 209 (365)
T 1jof_A 144 NTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVEL--VGSVDA-----------PDPGDHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp TCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEE--EEEEEC-----------SSTTCCEEEEEECTTSSEEEE
T ss_pred CCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEE--eeeEec-----------CCCCCCCCEeEECCCCCEEEE
Confidence 4678999999999 8777766 46899999998 554210 011110 011345889999999999887
Q ss_pred ec-C-CeEEEEECCC-CCccee---EEeeccCcccccccccCCC---cceeeeEEE-EcCCCCEEEEeeCC-C-----eE
Q 014644 265 RD-Y-MNLKLWDIRM-DSTPVA---TFKIHEHLRPKLCDLYNND---SIFDKFECS-VSGDGLHFATGSYS-N-----LL 328 (421)
Q Consensus 265 ~~-~-~~i~i~d~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~sp~~~~l~~~s~d-g-----~i 328 (421)
++ . +.|.+|++.. .++... .+........ .++. ..+.+..++ |+|||++|++++.+ + .|
T Consensus 210 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i 284 (365)
T 1jof_A 210 LMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP-----DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYI 284 (365)
T ss_dssp EETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC-----CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEE
T ss_pred EECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC-----CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeE
Confidence 64 3 8999998753 133321 1211100000 0000 000126899 99999998876643 2 89
Q ss_pred EEEecCCCCCcee---EEecCCCCccceeeec
Q 014644 329 RIFSHGVGSAGGI---TVEAGKNENRKPILQA 357 (421)
Q Consensus 329 ~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~ 357 (421)
.+|++...+.... ....+......++++|
T Consensus 285 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 285 AGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp EEEEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred EEEEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 9999973223322 1223444455666666
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=3.5e-16 Score=141.04 Aligned_cols=220 Identities=10% Similarity=0.056 Sum_probs=143.0
Q ss_pred cEEEEEEEEcCCCCeE-EEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccc
Q 014644 35 KINRVRWCAAPNGSMF-ILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 113 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l-~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 113 (421)
.+..++| +++++++ +++..++.|.+||+.+++...........
T Consensus 44 ~~~~~~~--s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~---------------------------------- 87 (349)
T 1jmx_B 44 GPGTAMM--APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP---------------------------------- 87 (349)
T ss_dssp SSCEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST----------------------------------
T ss_pred CCceeEE--CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc----------------------------------
Confidence 5788999 7888865 45567899999999887632211100000
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cC------------CcEEEEeCCCCceeeeeeecCC
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD------------LRINLWNLEISDQCFNIVDMKP 180 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d------------~~i~lwd~~~~~~~~~~~~~~~ 180 (421)
......+..++|+|+|++|+++ .+ +.|.+||+.+ ++..+.+.
T Consensus 88 ---------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~--- 142 (349)
T 1jmx_B 88 ---------------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPVR--- 142 (349)
T ss_dssp ---------------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCSE---
T ss_pred ---------------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC-ccccceee---
Confidence 0012346788999999999987 54 9999999983 22221110
Q ss_pred CCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhcccc-ccC--------------CCcc----
Q 014644 181 SNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAA-ESH--------------GSKS---- 241 (421)
Q Consensus 181 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~-~~~--------------~~~~---- 241 (421)
...+...+.+++|+|++ + +++++ +.|.+||+.+++... .+..+. ..+ ....
T Consensus 143 --~~~~~~~~~~~~~s~dg-~-l~~~~--~~i~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 143 --TFPMPRQVYLMRAADDG-S-LYVAG--PDIYKMDVKTGKYTV----ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp --EEECCSSCCCEEECTTS-C-EEEES--SSEEEECTTTCCEEE----EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred --eccCCCcccceeECCCC-c-EEEcc--CcEEEEeCCCCceec----cccccccCCccccCccceeeecCCCcceeEEe
Confidence 01233468899999999 6 55543 349999998876432 111100 000 0000
Q ss_pred ------------------------------------cccccccceeEEEEcC-CCCEEEEecCCeEEEEECCCCCcceeE
Q 014644 242 ------------------------------------FFTEIIASISDIKFAN-DGQHLLSRDYMNLKLWDIRMDSTPVAT 284 (421)
Q Consensus 242 ------------------------------------~~~~~~~~v~~~~~s~-~~~~l~~~~~~~i~i~d~~~~~~~~~~ 284 (421)
.+..+...+..++|+| +|++++++ ++.|.+||+.+ ++.+..
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~-~~~~~~ 290 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ-RKLIKA 290 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTT-TEEEEE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECcc-CeEEEE
Confidence 0001123566888999 99999888 78999999986 777766
Q ss_pred EeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 285 FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+...... .+++|+|+|++|++++.++.|++||+.++ .....+.
T Consensus 291 ~~~~~~~----------------~~~~~s~dg~~l~~~~~~~~v~v~d~~~~-~~~~~~~ 333 (349)
T 1jmx_B 291 ANLDHTY----------------YCVAFDKKGDKLYLGGTFNDLAVFNPDTL-EKVKNIK 333 (349)
T ss_dssp EECSSCC----------------CEEEECSSSSCEEEESBSSEEEEEETTTT-EEEEEEE
T ss_pred EcCCCCc----------------cceEECCCCCEEEEecCCCeEEEEecccc-ceeeeee
Confidence 6544332 58999999998888888999999999877 4444443
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=3e-14 Score=124.74 Aligned_cols=246 Identities=9% Similarity=0.100 Sum_probs=165.3
Q ss_pred cccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 31 EIEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
++-....++++ ++++.++++...++.|.+||.+......+.. .+
T Consensus 27 g~~~~p~~v~~--~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~---~~------------------------------- 70 (286)
T 1q7f_A 27 GQFTEPSGVAV--NAQNDIIVADTNNHRIQIFDKEGRFKFQFGE---CG------------------------------- 70 (286)
T ss_dssp TCBSCEEEEEE--CTTCCEEEEEGGGTEEEEECTTSCEEEEECC---BS-------------------------------
T ss_pred CccCCCceEEE--CCCCCEEEEECCCCEEEEECCCCcEEEEecc---cC-------------------------------
Confidence 34456889999 7889988888899999999977432221110 00
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEee-cCCCCEEEEE-c-CCcEEEEeCCCCceeeeeeecCCCCCCccC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISN-NSDCETFVSA-D-DLRINLWNLEISDQCFNIVDMKPSNMDDLT 187 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~~~~~~l~s~-~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 187 (421)
...++...+..+++ .++++++++. . ++.|.+||.. ++.+..+. ..+.
T Consensus 71 ----------------------~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~--g~~~~~~~------~~~~ 120 (286)
T 1q7f_A 71 ----------------------KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY--GQFVRKFG------ATIL 120 (286)
T ss_dssp ----------------------SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT--SCEEEEEC------TTTC
T ss_pred ----------------------CCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC--CcEEEEec------CccC
Confidence 00245556889999 5788877776 4 8999999954 44444431 2234
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 267 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (421)
..+.+++++|++ +++++...++.|.+||... ... ..+.. ..+...+..++++|+|+++++...
T Consensus 121 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~~~----~~~~~-----------~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 121 QHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG-NVL----HKFGC-----------SKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp SCEEEEEECTTS-CEEEEETTTTEEEEECTTS-CEE----EEEEC-----------TTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCceEEEEeCCC-CEEEEECCCCEEEEEcCCC-CEE----EEeCC-----------CCccCCcEEEEECCCCCEEEEECC
Confidence 568999999999 8777777889999999653 221 11211 011345789999999997777665
Q ss_pred -CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCC-eEEEEecCCCCCceeEEec
Q 014644 268 -MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSN-LLRIFSHGVGSAGGITVEA 345 (421)
Q Consensus 268 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg-~i~iwd~~~~~~~~~~~~~ 345 (421)
+.|++||.. ++.+..+....... ...+++++|+|+++++...++ .|++|+.. + .....+..
T Consensus 184 ~~~i~~~~~~--g~~~~~~~~~g~~~-------------~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g-~~~~~~~~ 246 (286)
T 1q7f_A 184 AHCVKVFNYE--GQYLRQIGGEGITN-------------YPIGVGINSNGEILIADNHNNFNLTIFTQD-G-QLISALES 246 (286)
T ss_dssp GTEEEEEETT--CCEEEEESCTTTSC-------------SEEEEEECTTCCEEEEECSSSCEEEEECTT-S-CEEEEEEE
T ss_pred CCEEEEEcCC--CCEEEEEccCCccC-------------CCcEEEECCCCCEEEEeCCCCEEEEEECCC-C-CEEEEEcc
Confidence 899999974 55555554332100 116899999999888888776 99999954 3 22222221
Q ss_pred CCCCccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 346 GKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
+. ....+..++++|+|+++++..++.+++|+
T Consensus 247 ~~--------------------------------------------~~~~~~~i~~~~~g~l~vs~~~~~v~v~~ 277 (286)
T 1q7f_A 247 KV--------------------------------------------KHAQCFDVALMDDGSVVLASKDYRLYIYR 277 (286)
T ss_dssp SS--------------------------------------------CCSCEEEEEEETTTEEEEEETTTEEEEEE
T ss_pred cC--------------------------------------------CCCcceeEEECCCCcEEEECCCCeEEEEE
Confidence 10 01235688999999888776677799886
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=3e-15 Score=148.86 Aligned_cols=274 Identities=8% Similarity=0.022 Sum_probs=162.2
Q ss_pred eccCCCCceeeeecccccccceeEEeecccceeeeeeeecCCCCcc-----eEEEeecCCCCEEEEE-cC---------C
Q 014644 95 NEHNPPSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFN-----INSISNNSDCETFVSA-DD---------L 159 (421)
Q Consensus 95 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~~~~~~l~s~-~d---------~ 159 (421)
.+.+.+++.++..+ ++.+.+|+..++ ++...+ .+|... ...++|||||++|+.+ .+ +
T Consensus 21 ~~~w~~dg~~~~~~----~~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ----ENNILVFNAEYG---NSSVFL-ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CEEECSSSEEEEEE----TTEEEEEETTTC---CEEEEE-CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccEECCCCcEEEEc----CCcEEEEECCCC---ceEEEE-echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 44555666666654 467899999887 565656 666543 2347889999999997 65 5
Q ss_pred cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCC
Q 014644 160 RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGS 239 (421)
Q Consensus 160 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~ 239 (421)
.+.+||+. +++... +..|...+..++||||| +.|+.+ .++.|++||+.++.... -...++ .
T Consensus 93 ~~~~~d~~-~~~~~~--------l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~~~~~---lt~~g~-----~ 153 (740)
T 4a5s_A 93 SYDIYDLN-KRQLIT--------EERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYR---ITWTGK-----E 153 (740)
T ss_dssp EEEEEETT-TTEECC--------SSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEE---CCSCCB-----T
T ss_pred EEEEEECC-CCcEEE--------cccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCCceEE---EcCCCC-----c
Confidence 67799998 455432 35677789999999999 888887 57899999998765320 011110 0
Q ss_pred cccccccc---------cceeEEEEcCCCCEEEEec-C-C-----------------------------------eEEEE
Q 014644 240 KSFFTEII---------ASISDIKFANDGQHLLSRD-Y-M-----------------------------------NLKLW 273 (421)
Q Consensus 240 ~~~~~~~~---------~~v~~~~~s~~~~~l~~~~-~-~-----------------------------------~i~i~ 273 (421)
...+.++. .....+.|||||++|+..+ + . .|++|
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 00111111 2234689999999998763 2 3 34555
Q ss_pred ECCC---CCc-ceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC----CCeEEEEecCCCCC-----ce
Q 014644 274 DIRM---DST-PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY----SNLLRIFSHGVGSA-----GG 340 (421)
Q Consensus 274 d~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~----dg~i~iwd~~~~~~-----~~ 340 (421)
|+.+ ... ....+..... ....+. -+..++|+|||+.++.... +..|++||+.++.. ..
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~-------~~~~~~--~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPAS-------MLIGDH--YLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHH-------HHTSCE--EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred ECCCCCCCCcceEEEecCCcc-------CCCCCe--EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 5542 110 1111211000 000011 1368999999997665532 34799999998741 12
Q ss_pred eEE--ecCCCCcc-----ceeeecCCcccccccceee-ee-cccCc-ccC--C-CCCccccccccccCeEEEEEccCCCe
Q 014644 341 ITV--EAGKNENR-----KPILQAAPRARRSSLSNLT-RG-LYRQA-HEN--S-SSGHHELSYNLSSKLLHLAWHPTTNL 407 (421)
Q Consensus 341 ~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~l~-~g-~~d~~-~iw--~-~~~~~~~~~~~~~~v~~~~~spd~~~ 407 (421)
..+ ..|...+. .+.|+|+ |+ .|+ .. ..+|. .|| + .++....+......|..+. .+|++.
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspD--G~-----~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~-~~d~~~ 376 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLD--GN-----SFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIE-ALTSDY 376 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTT--SS-----EEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEE-EECSSE
T ss_pred EEeeeccCCceEccCcCCCceEcCC--CC-----EEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEE-EEeCCE
Confidence 222 56666655 7889998 44 444 44 45565 666 2 2333333333344565543 355776
Q ss_pred EEEec
Q 014644 408 IACAN 412 (421)
Q Consensus 408 la~~~ 412 (421)
|+..+
T Consensus 377 i~f~~ 381 (740)
T 4a5s_A 377 LYYIS 381 (740)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66544
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=1.6e-14 Score=131.05 Aligned_cols=175 Identities=10% Similarity=0.072 Sum_probs=108.2
Q ss_pred CCcceEEEeecCCCCEEEEE-cC----CcEEEEeCCCC-ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cC
Q 014644 137 HDFNINSISNNSDCETFVSA-DD----LRINLWNLEIS-DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SR 209 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~s~-~d----~~i~lwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d 209 (421)
+...+..++|+|++++|+++ .+ +.|.+|+++.. +....+. ....+......+++ ++ ++|++++ .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~-----~~~~~~~~p~~~~~--dg-~~l~~~~~~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN-----TQKTMGADPCYLTT--NG-KNIVTANYSG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE-----EEECSSSCEEEEEE--CS-SEEEEEETTT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee-----EeccCCCCcEEEEE--CC-CEEEEEECCC
Confidence 44567789999999999987 54 79999998743 3322221 11224455677777 77 6666666 68
Q ss_pred CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCc------c
Q 014644 210 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDST------P 281 (421)
Q Consensus 210 ~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~------~ 281 (421)
+.|.+|++...................+. ....+...+.+++|+|+|+++++++ . +.|++|++..... .
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l 196 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPD---KERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKF 196 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSC---TTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCC
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCC---ccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccce
Confidence 89999999754322111111000000000 0111233468899999999776653 3 8999999875332 2
Q ss_pred e-----eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 282 V-----ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 282 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
. ......... ....++|+|+|++|++++ .++.|.+|++.++
T Consensus 197 ~~~~~~~~~~~~~~~--------------~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 197 LTKGTPEAFKVAPGS--------------GPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp EEEEEEEEEECCTTC--------------CEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred eecccccceecCCCC--------------CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 1 111111111 116899999999888777 5899999999865
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.69 E-value=4.8e-14 Score=126.13 Aligned_cols=283 Identities=8% Similarity=0.005 Sum_probs=170.9
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
-..+.+|++ +++++++++...++.+.+++.+....... ....+ ..
T Consensus 23 l~~v~~va~--d~~G~l~v~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------------~~ 67 (329)
T 3fvz_A 23 PGQVSGVAL--DSKNNLVIFHRGDHVWDGNSFDSKFVYQQ---RGLGP------------------------------IE 67 (329)
T ss_dssp CSCEEEEEE--CTTCCEEEEECTTCCCCTTSBCTTSCBSC---GGGCS------------------------------CC
T ss_pred cCCceEEEE--CCCCCEEEEeCCCCeEEeeccCcceeecc---ccccc------------------------------cc
Confidence 357899999 78999999888887665554433211000 00000 01
Q ss_pred ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecC--CCCCCccCCC
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK--PSNMDDLTEV 189 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~--~~~~~~~~~~ 189 (421)
...+.+|+..++ +.++.+..++-.....++++|+|+++++. .++.|++|+.......+..+... +..-.++...
T Consensus 68 ~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 144 (329)
T 3fvz_A 68 EDTILVIDPNNA---EILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ 144 (329)
T ss_dssp SCCEEEECTTTC---CEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS
T ss_pred CCcEEEEECCCC---eEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC
Confidence 234666766555 44555534555678999999999988888 89999999987221133333110 0000234456
Q ss_pred eeEEEEec-CCCCeEEEEE-cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCC-CCEEEEec
Q 014644 190 ITSAEFHP-IYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAND-GQHLLSRD 266 (421)
Q Consensus 190 v~~~~~~p-~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~ 266 (421)
..+++++| ++ .++++.+ .++.|++||. .+... ..+....... .....+-.....++++|+ +.++++..
T Consensus 145 P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~-~g~~~----~~~~~~g~~~---~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 145 PTDVAVEPSTG-AVFVSDGYCNSRIVQFSP-SGKFV----TQWGEESSGS---SPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp EEEEEECTTTC-CEEEEECSSCCEEEEECT-TSCEE----EEECEECCSS---SCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEeCCCC-eEEEEeCCCCCeEEEEcC-CCCEE----EEeccCCCCC---CCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 88999999 66 7777776 6899999994 44332 2222100000 000112345789999998 66666665
Q ss_pred C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcC------CCCEEEEeeCCCeEEEEecCCCCCc
Q 014644 267 Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG------DGLHFATGSYSNLLRIFSHGVGSAG 339 (421)
Q Consensus 267 ~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp------~~~~l~~~s~dg~i~iwd~~~~~~~ 339 (421)
. +.|++||..+ ++.+..+....... .+.+++|+| +|+..++...+..|++|++.++ ..
T Consensus 216 ~~~~I~~~~~~~-G~~~~~~~~~~~~~-------------~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g-~~ 280 (329)
T 3fvz_A 216 ENGRIQCFKTDT-KEFVREIKHASFGR-------------NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG-EI 280 (329)
T ss_dssp TTTEEEEEETTT-CCEEEEECCTTTTT-------------CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC-CE
T ss_pred CCCEEEEEECCC-CcEEEEEeccccCC-------------CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC-eE
Confidence 5 8999999975 77777765432211 115788888 3332223334568999998876 32
Q ss_pred eeEEecCCCCccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEccCCCeEEEec-CCceEE
Q 014644 340 GITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTNLIACAN-GNSLFF 418 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~-~~~~~i 418 (421)
...+.. . .++...+..++++|+|.++++.. ++.|++
T Consensus 281 ~~~~~~------------~-------------------------------~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 281 IDVFKP------------V-------------------------------RKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp EEEECC------------S-------------------------------SSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred EEEEcC------------C-------------------------------CCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 222210 0 01134567899999997777666 567888
Q ss_pred Ee
Q 014644 419 HY 420 (421)
Q Consensus 419 ~~ 420 (421)
|+
T Consensus 318 ~~ 319 (329)
T 3fvz_A 318 FT 319 (329)
T ss_dssp EE
T ss_pred Ee
Confidence 85
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.69 E-value=4.2e-16 Score=143.14 Aligned_cols=217 Identities=12% Similarity=0.009 Sum_probs=128.8
Q ss_pred EEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeE-------------------EEEecCCCCe
Q 014644 143 SISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS-------------------AEFHPIYCNL 202 (421)
Q Consensus 143 ~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~p~~~~~ 202 (421)
.+.|+|||+.|+.+ .++.|++||+. +++...+.. .+...... +.|+|++ +.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~-~~~~~~~~~-------~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~ 155 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLE-TLEEQVIYT-------VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SW 155 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETT-TCCEEEEEE-------CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECC-CCCcEEEEe-------cccccCCCCCEEEeccCCccccccccccccCCCC-cc
Confidence 47899999999887 88899999998 444443331 11111111 3467777 55
Q ss_pred EEEE-----EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC-------Ce
Q 014644 203 LAYS-----SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY-------MN 269 (421)
Q Consensus 203 l~s~-----~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~-------~~ 269 (421)
++.. ..+..|.+||+.+++.. .+... ...+..+.|+| +++.|+..+. ..
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g~~~----~~~~~--------------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETGELE----VIHQD--------------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDAR 217 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTCCEE----EEEEE--------------SSCEEEEEEETTEEEEEEEEECSCSSSCSCC
T ss_pred eeeeeeccCCCcceEEEEECCCCcEE----eeccC--------------CcccccceECCCCCCEEEEEecCCCCCCCce
Confidence 5543 35668999998876532 22122 45688999999 7887765432 25
Q ss_pred EEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC-----CeEEEEecCCCCCceeEEe
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS-----NLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d-----g~i~iwd~~~~~~~~~~~~ 344 (421)
|.+||+.. ++. ..+..+... ..+..++|+|+|++|+.++.+ +.|++||+.++.. .....
T Consensus 218 l~~~d~~~-~~~-~~l~~~~~~-------------~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~ 281 (396)
T 3c5m_A 218 MWLVNEDG-SNV-RKIKEHAEG-------------ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMV 281 (396)
T ss_dssp CEEEETTS-CCC-EESSCCCTT-------------EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEE
T ss_pred EEEEECCC-Cce-eEeeccCCC-------------ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeee
Confidence 88888763 332 222222110 012578999999988777554 4599999987632 22221
Q ss_pred cCCCCccceeeec-CCcccccccceeeeecc----------------cCc-ccCCC-CCcccccccccc-----------
Q 014644 345 AGKNENRKPILQA-APRARRSSLSNLTRGLY----------------RQA-HENSS-SGHHELSYNLSS----------- 394 (421)
Q Consensus 345 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~----------------d~~-~iw~~-~~~~~~~~~~~~----------- 394 (421)
... .. ..|++ + ++ .++.++. +.. .+|+. ++....+..+..
T Consensus 282 -~~~-~~-~~~s~~d--g~-----~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 282 -MPP-CS-HLMSNFD--GS-----LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQI 351 (396)
T ss_dssp -CCS-EE-EEEECSS--SS-----EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSST
T ss_pred -CCC-CC-CCccCCC--Cc-----eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccC
Confidence 111 22 77887 6 33 5554321 122 45532 222223333332
Q ss_pred CeEEEEEccCCCeEEEec
Q 014644 395 KLLHLAWHPTTNLIACAN 412 (421)
Q Consensus 395 ~v~~~~~spd~~~la~~~ 412 (421)
.+..++|+|||+.|+.++
T Consensus 352 ~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp TCCCCEECTTSSEEEEEE
T ss_pred CCCCceEccCCCeEEEEe
Confidence 256789999999988776
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=3.6e-15 Score=146.65 Aligned_cols=206 Identities=10% Similarity=-0.000 Sum_probs=129.0
Q ss_pred CCcceEEEeecCCCCEEEEE-cC----------CcEEEEeCCCC-----ceeeeeeecCCCCCC-ccCCCeeEEEEecCC
Q 014644 137 HDFNINSISNNSDCETFVSA-DD----------LRINLWNLEIS-----DQCFNIVDMKPSNMD-DLTEVITSAEFHPIY 199 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~s~-~d----------~~i~lwd~~~~-----~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~ 199 (421)
|...+.+++|+|||+.|+++ .+ ..|++||+... +.. +.+ . .+...+.+++|+|||
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l-------~~~~~~~~~~~~~SpDG 199 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-REL-------SDDAHRFVTGPRLSPDG 199 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EES-------SCSCSSEECCCEECTTS
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEE-------EecCCCcccCceECCCC
Confidence 66778899999999999987 55 58999999831 332 222 3 455678889999999
Q ss_pred CCeEEEEEcC--------CeEEEEECC-cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C-
Q 014644 200 CNLLAYSSSR--------GFVRLVDMR-QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M- 268 (421)
Q Consensus 200 ~~~l~s~~~d--------~~v~iwd~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~- 268 (421)
+.|+.++.+ ..|++||+. ++... ....+... +...+..++|+|||+++++++. +
T Consensus 200 -~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~-~~~~l~~~-------------~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 200 -RQAVWLAWDHPRMPWEGTELKTARVTEDGRFA-DTRTLLGG-------------PEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp -SEEEEEEECTTCCTTTCEEEEEEEECTTSCEE-EEEEEEEE-------------TTBCEEEEEECTTSCEEEEECTTSS
T ss_pred -CEEEEEECCCCCCCCCCcEEEEEEECCCCccc-ccEEeCCC-------------CCceEcceEECCCCeEEEEECCCCC
Confidence 888887755 379999998 45110 00122222 2467889999999997766654 6
Q ss_pred -eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCC
Q 014644 269 -NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 269 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
.|.+||+.+ ++.......+.... ......++..++|+|+++++++++. +.++||.++........+..+.
T Consensus 265 ~~l~~~~~~~-~~~~~l~~~~~~~~-------~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~l~~~~ 335 (662)
T 3azo_A 265 WNLHRVDPAT-GAATQLCRREEEFA-------GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVDAAGPW 335 (662)
T ss_dssp CEEEEECTTT-CCEEESSCCSSBSS-------CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEECCSSC
T ss_pred eEEEEEECCC-Cceeeccccccccc-------CccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEEecCCC
Confidence 666677643 44333222221110 0000111257899999999999998 9999995543223456677776
Q ss_pred CCccceeeecCCcccccccceeeeecccCc-ccC
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
..+..+. +++ +. ...+++++.+.. .+|
T Consensus 336 ~~~~~~~-s~~--~~---~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 336 TEWAATL-TVS--GT---RAVGVAASPRTAYEVV 363 (662)
T ss_dssp CEEEEEE-EEE--TT---EEEEEEEETTEEEEEE
T ss_pred CeEEEEE-ecC--CC---EEEEEEcCCCCCCEEE
Confidence 6665551 333 11 224444555544 666
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=2.5e-15 Score=137.65 Aligned_cols=241 Identities=8% Similarity=-0.026 Sum_probs=147.5
Q ss_pred eeeeeecCCCCcceEE-----EeecCCCCEEEEE-c-CCc--EEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC
Q 014644 128 RCQKVYPHAHDFNINS-----ISNNSDCETFVSA-D-DLR--INLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI 198 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~-----l~~~~~~~~l~s~-~-d~~--i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 198 (421)
..+..+ ..|...... .+|+|||++|+.+ . ++. |.+||+. +++...+. .++...+.++.|+|+
T Consensus 21 ~~~~~l-t~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~-~g~~~~lt-------~~~~~~~~~~~~spd 91 (388)
T 3pe7_A 21 AQVTRL-TPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLN-TQVATQLT-------EGRGDNTFGGFLSPD 91 (388)
T ss_dssp CEEEEC-SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETT-TCEEEECC-------CSSCBCSSSCEECTT
T ss_pred cceEEe-cCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCC-CCceEEee-------eCCCCCccceEEcCC
Confidence 445555 566665655 8899999999987 5 674 8888887 45544432 445555557789999
Q ss_pred CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeE--EEEcCCCCEEEEe-----------
Q 014644 199 YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD--IKFANDGQHLLSR----------- 265 (421)
Q Consensus 199 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~~~----------- 265 (421)
+ +.|++++.++.|++||+.+++.. .++..+ ...+.. ..++|++++++..
T Consensus 92 g-~~l~~~~~~~~l~~~d~~~g~~~----~~~~~~-------------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 92 D-DALFYVKDGRNLMRVDLATLEEN----VVYQVP-------------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp S-SEEEEEETTTEEEEEETTTCCEE----EEEECC-------------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred C-CEEEEEeCCCeEEEEECCCCcce----eeeech-------------hhcccccceeECCCCCeeccccccCccccccc
Confidence 9 99999999999999999987532 222221 222322 3458999988742
Q ss_pred -----------cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcC-CCCEEEEeeCC------C
Q 014644 266 -----------DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG-DGLHFATGSYS------N 326 (421)
Q Consensus 266 -----------~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~~s~d------g 326 (421)
.. ..|++||+.+ ++.. .+..+...+ ..++|+| ||+.|+..+.+ .
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~-g~~~-~l~~~~~~~---------------~~~~~sp~dg~~l~~~~~~~~~~~~~ 216 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKT-GEST-VILQENQWL---------------GHPIYRPYDDSTVAFCHEGPHDLVDA 216 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTT-CCEE-EEEEESSCE---------------EEEEEETTEEEEEEEEECSCTTTSSC
T ss_pred ccchhhhhhccCCcceEEEEECCC-CceE-EeecCCccc---------------cccEECCCCCCEEEEEEecCCCCCcc
Confidence 12 6799999986 5543 333333322 6899999 99998877753 3
Q ss_pred eEEEEecCCCCCceeEEecCC--CCccceeeecCCcccccccceeeeecc-cCc-----ccCCCC-Ccccccccccc---
Q 014644 327 LLRIFSHGVGSAGGITVEAGK--NENRKPILQAAPRARRSSLSNLTRGLY-RQA-----HENSSS-GHHELSYNLSS--- 394 (421)
Q Consensus 327 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~g~~-d~~-----~iw~~~-~~~~~~~~~~~--- 394 (421)
.|+++|+..+ ....+..+. ..+....|+|+ |+ .|+..+. ++. .+|+.. +..........
T Consensus 217 ~l~~~d~~~~--~~~~l~~~~~~~~~~~~~~spd--g~-----~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~ 287 (388)
T 3pe7_A 217 RMWLINEDGT--NMRKVKTHAEGESCTHEFWVPD--GS-----ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH 287 (388)
T ss_dssp SEEEEETTSC--CCEESCCCCTTEEEEEEEECTT--SS-----CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred eEEEEeCCCC--ceEEeeeCCCCcccccceECCC--CC-----EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence 7888887654 233343343 24667889988 44 4544332 222 344322 11111111111
Q ss_pred ---CeEEEEEccCCCeEEEec----------CCceEEEeC
Q 014644 395 ---KLLHLAWHPTTNLIACAN----------GNSLFFHYA 421 (421)
Q Consensus 395 ---~v~~~~~spd~~~la~~~----------~~~~~i~~~ 421 (421)
....++|+|||+.|+... ...|++|+.
T Consensus 288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 112237999999988642 446888863
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=3.6e-14 Score=140.52 Aligned_cols=240 Identities=8% Similarity=-0.081 Sum_probs=158.0
Q ss_pred CCCCcceEEEeecCCCCEEEEE-c-CC----cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc
Q 014644 135 HAHDFNINSISNNSDCETFVSA-D-DL----RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 208 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~-d~----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 208 (421)
.+|...+..++|||||++|+.+ . +| .|++||+. +++..... . ....+.+++|+||| +.|+.++.
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~-tg~~~~~~-------~-~~~~~~~~~wspDg-~~l~~~~~ 190 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD-GAKELPDV-------L-ERVKFSCMAWTHDG-KGMFYNAY 190 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT-TTEEEEEE-------E-EEECSCCEEECTTS-SEEEEEEC
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC-CCCCCccc-------c-cCcccceEEEEeCC-CEEEEEEE
Confidence 4565678899999999999986 4 33 89999998 45544321 1 11236789999999 88888887
Q ss_pred CCe----------------EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec------
Q 014644 209 RGF----------------VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD------ 266 (421)
Q Consensus 209 d~~----------------v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------ 266 (421)
++. |++|++.++..... .++.. ..+...+..+.|+|||++|+...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~--~v~~~-----------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 257 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI--LCAEF-----------PDEPKWMGGAELSDDGRYVLLSIREGCDP 257 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE--EEECC-----------TTCTTCEEEEEECTTSCEEEEEEECSSSS
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccce--EEecc-----------CCCCeEEEEEEEcCCCCEEEEEEEccCCC
Confidence 765 99999987642211 11111 11234577899999999988652
Q ss_pred CCeEEEEECCC------CCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC----CeEEEEecCCC
Q 014644 267 YMNLKLWDIRM------DSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS----NLLRIFSHGVG 336 (421)
Q Consensus 267 ~~~i~i~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d----g~i~iwd~~~~ 336 (421)
...|++||+.+ .......+..+.... ...|+|+|+.|+..+.. +.|++||+.++
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~----------------~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGE----------------YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC----------------EEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcE----------------EEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 25799999864 122345555544432 23588999887766653 36999999876
Q ss_pred CC-ceeEEecCCC--CccceeeecCCcccccccceeeeecccCc-ccC--C--CCCccccccccccCeEEEEEccCCCeE
Q 014644 337 SA-GGITVEAGKN--ENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--S--SSGHHELSYNLSSKLLHLAWHPTTNLI 408 (421)
Q Consensus 337 ~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~--~~~~~~~~~~~~~~v~~~~~spd~~~l 408 (421)
.. ....+..|.. .+..+.+.+. ..++++...++. +|| + .++....+..+...|..++++|+++.|
T Consensus 322 ~~~~~~~l~~~~~~~~~~~~~~~~~-------~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 322 EESKWKVLVPEHEKDVLEWVACVRS-------NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEI 394 (710)
T ss_dssp CGGGCEEEECCCSSCEEEEEEEETT-------TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEE
T ss_pred CcccceeccCCCCCCeEEEEEEEcC-------CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEE
Confidence 32 2345555544 5666777644 237788888887 776 3 333333444446678899999999877
Q ss_pred EEec-----CCceEEEe
Q 014644 409 ACAN-----GNSLFFHY 420 (421)
Q Consensus 409 a~~~-----~~~~~i~~ 420 (421)
+... ...++.|+
T Consensus 395 ~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 395 FYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEEEECSSCCCEEEEEE
T ss_pred EEEEeCCCCCCEEEEEE
Confidence 6442 24688876
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=3.3e-14 Score=127.38 Aligned_cols=230 Identities=11% Similarity=0.012 Sum_probs=144.0
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC----
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR---- 209 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---- 209 (421)
..+...+.+++|++++++++++ .++.|.+||.+ +++..... ..+...+.+++++|++ +++++...+
T Consensus 41 ~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~-~~~~~~~~-------~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE-TKEIKRPF-------VSHKANPAAIKIHKDG-RLFVCYLGDFKST 111 (333)
T ss_dssp ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEE-------ECSSSSEEEEEECTTS-CEEEEECTTSSSC
T ss_pred eccCccccCcEECCCCCEEEEECCCCEEEEEeCC-CCcEEEEe-------eCCCCCcceEEECCCC-cEEEEeCCCCCCC
Confidence 4556667899999999988888 89999999998 44433322 1345679999999998 877776666
Q ss_pred CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-------CeEEEEECCCCCcce
Q 014644 210 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-------MNLKLWDIRMDSTPV 282 (421)
Q Consensus 210 ~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------~~i~i~d~~~~~~~~ 282 (421)
+.|.+||..++... ..+.. ......+..++++|+|+++++... +.|..+|... ++ +
T Consensus 112 ~~i~~~d~~~~~~~----~~~~~-----------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~-~~-~ 174 (333)
T 2dg1_A 112 GGIFAATENGDNLQ----DIIED-----------LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RT-V 174 (333)
T ss_dssp CEEEEECTTSCSCE----EEECS-----------SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CC-E
T ss_pred ceEEEEeCCCCEEE----EEEcc-----------CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC-CE-E
Confidence 68999998875432 11111 001346889999999988887642 4455555542 33 3
Q ss_pred eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEE-EeeCCCeEEEEecCCCCCceeEE--------ecCCCCccce
Q 014644 283 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYSNLLRIFSHGVGSAGGITV--------EAGKNENRKP 353 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~dg~i~iwd~~~~~~~~~~~--------~~~~~~~~~~ 353 (421)
..+....... ..++|+|+++.|+ +.+.++.|++|++.+.......+ .++ .....+
T Consensus 175 ~~~~~~~~~~---------------~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i 238 (333)
T 2dg1_A 175 TPIIQNISVA---------------NGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSC 238 (333)
T ss_dssp EEEEEEESSE---------------EEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEE
T ss_pred EEeecCCCcc---------------cceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCce
Confidence 3332211111 6899999998665 44567899999997432222111 111 234556
Q ss_pred eeecCCcccccccceeeeecccCc-ccCCCCCcccccc-ccc------cCeEEEEEccCCCeEEEecC
Q 014644 354 ILQAAPRARRSSLSNLTRGLYRQA-HENSSSGHHELSY-NLS------SKLLHLAWHPTTNLIACANG 413 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~~~~~~-~~~------~~v~~~~~spd~~~la~~~~ 413 (421)
++.++ +. .+++...++. .+|+..+...... ... ..+.+++|+||+..|++++.
T Consensus 239 ~~d~~--G~-----l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 239 CIDSD--DN-----LYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEBTT--CC-----EEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred EECCC--CC-----EEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 66665 33 5555545555 7774433222222 111 15889999999877766553
No 174
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=1.5e-13 Score=120.93 Aligned_cols=236 Identities=10% Similarity=0.011 Sum_probs=153.4
Q ss_pred CCCCcceEEEeecCCCC-EEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeE
Q 014644 135 HAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 212 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v 212 (421)
..+.....+++|+|+++ +++++ .++.|..|+.. ++ ...+ ..+...+.+++++|++ +++++...++.|
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~-~~--~~~~-------~~~~~~~~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD-GQ--LSPE-------MHPSHHQNGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT-SC--EEEE-------ESSCSSEEEEEECTTC-CEEEEETTTTEE
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC-CC--eEEE-------ECCCCCcceeeECCCC-cEEEEecCCCeE
Confidence 34555678999999998 67777 89999999998 33 3333 3355678999999999 777776667899
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE----ec-----------C-CeEEEEECC
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS----RD-----------Y-MNLKLWDIR 276 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~-----------~-~~i~i~d~~ 276 (421)
.+||..+++.. ...... . ......+..++++|+|+++++ ++ + +.-.||.+.
T Consensus 93 ~~~d~~~g~~~----~~~~~~-~--------~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 93 ERQREPGGEWE----SIADSF-E--------GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp EEECSTTCCEE----EEECEE-T--------TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred EEEcCCCCcEE----EEeecc-C--------CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 99999776532 111110 0 001235678999999998887 32 0 112444443
Q ss_pred CCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCc---eeEEecCCCCccce
Q 014644 277 MDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAG---GITVEAGKNENRKP 353 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~ 353 (421)
..++ +..+..+.... ..++|+|+++.+++.+.++.|++|++...+.. ...+..+......+
T Consensus 160 ~~g~-~~~~~~~~~~~---------------~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 160 PDGT-LSAPIRDRVKP---------------NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp TTSC-EEEEECCCSSE---------------EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE
T ss_pred CCCC-EEEeecCCCCC---------------ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE
Confidence 3233 33333222211 68999999998877778899999999732232 22333445556678
Q ss_pred eeecCCcccccccceeeeecccCc-ccCCCCCc-cccccccccCeEEEEE-ccCCCeEEEecCCceEEEe
Q 014644 354 ILQAAPRARRSSLSNLTRGLYRQA-HENSSSGH-HELSYNLSSKLLHLAW-HPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~-~~~~~~~~~~v~~~~~-spd~~~la~~~~~~~~i~~ 420 (421)
++.++ |+ ++++. ++. .+|+..+. ......... +.+++| +|+++.|.+++.++++-++
T Consensus 224 ~~d~~--G~-----l~v~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 224 RVDAG--GL-----IWASA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp EEBTT--SC-----EEEEE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred EECCC--CC-----EEEEc--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 88776 43 44444 444 77744333 333333444 899999 6899999999888877664
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=4.1e-14 Score=139.66 Aligned_cols=238 Identities=6% Similarity=-0.045 Sum_probs=149.0
Q ss_pred CCCCcceEEEeecCCCCEEEEE------cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc
Q 014644 135 HAHDFNINSISNNSDCETFVSA------DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 208 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 208 (421)
.+|...+..++|||||++||.+ ++.+|++||+. +++.+.. ..+... ...+++|+||| +.|++++.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~-tg~~~~~-----~~~~~~--~~~~~~wspDg-~~l~~~~~ 187 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD-SGEWSKV-----DVIEGG--KYATPKWTPDS-KGFYYEWL 187 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT-TCCBCSS-----CCBSCC--TTCCCEECTTS-SEEEEEEC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC-CCCCcCC-----cccCcc--cccceEEecCC-CEEEEEEe
Confidence 4677789999999999999953 34689999998 4443310 011111 12678999999 88998888
Q ss_pred CCe-------------EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C----eE
Q 014644 209 RGF-------------VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M----NL 270 (421)
Q Consensus 209 d~~-------------v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~----~i 270 (421)
|.. |++|++.++..... .++.. ..+...+..+.|+|||++|+..+. + .|
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~--lv~~~-----------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l 254 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKDT--VVHER-----------TGDPTTFLQSDLSRDGKYLFVYILRGWSENDV 254 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGCE--EEECC-----------CCCTTCEEEEEECTTSCCEEEEEEETTTEEEE
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhce--EEEec-----------CCCCEEEEEEEECCCCCEEEEEEeCCCCceEE
Confidence 766 99999987653211 11111 112356789999999999887543 4 67
Q ss_pred EEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee---CCCeEEEEecCCCCCc-eeEEecC
Q 014644 271 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS---YSNLLRIFSHGVGSAG-GITVEAG 346 (421)
Q Consensus 271 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s---~dg~i~iwd~~~~~~~-~~~~~~~ 346 (421)
++++... ++ ...+..+.... ....+ ++|.+++... .++.|++||+.++... ...+..+
T Consensus 255 ~~~~~~~-~~-~~~l~~~~~~~---------------~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 316 (695)
T 2bkl_A 255 YWKRPGE-KD-FRLLVKGVGAK---------------YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE 316 (695)
T ss_dssp EEECTTC-SS-CEEEEECSSCC---------------EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC
T ss_pred EEEcCCC-Cc-eEEeecCCCce---------------EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC
Confidence 7776543 33 44444444322 34555 5666444433 2588999999876321 2333333
Q ss_pred --CCCccceeeecCCcccccccceeeeecccCc-ccC--C-CCCcccccccc-ccCeEEEEEccCCCeEEEec-----CC
Q 014644 347 --KNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--S-SSGHHELSYNL-SSKLLHLAWHPTTNLIACAN-----GN 414 (421)
Q Consensus 347 --~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~-~~~~~~~~~~~-~~~v~~~~~spd~~~la~~~-----~~ 414 (421)
...+..+.+. . + .++++...++. +|| + .++.......+ ...|..++++|+++.|+... ..
T Consensus 317 ~~~~~l~~~~~~-~--~-----~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 388 (695)
T 2bkl_A 317 DSSASLLSVSIV-G--G-----HLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPR 388 (695)
T ss_dssp CSSCEEEEEEEE-T--T-----EEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEE
T ss_pred CCCCeEEEEEEE-C--C-----EEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 3345666665 2 2 27788888888 888 3 23322222222 55677889999998877443 24
Q ss_pred ceEEEe
Q 014644 415 SLFFHY 420 (421)
Q Consensus 415 ~~~i~~ 420 (421)
.+++|+
T Consensus 389 ~v~~~d 394 (695)
T 2bkl_A 389 QIYKTS 394 (695)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 588876
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.63 E-value=4.6e-13 Score=121.16 Aligned_cols=304 Identities=8% Similarity=-0.029 Sum_probs=181.3
Q ss_pred CCCCeEEEEe------CCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc--------
Q 014644 45 PNGSMFILST------NDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW-------- 110 (421)
Q Consensus 45 ~~~~~l~t~s------~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-------- 110 (421)
+++.++.+.. .|++|.+||..++++...... .. .. .+.+++++.++.....
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~-g~-------------~p-~i~~spdg~~lyv~~~~~~~~~~g 77 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT-AF-------------NG-HVQVSNDGKKIYTMTTYHERITRG 77 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC-CE-------------EE-EEEECTTSSEEEEEEEEETTSSSS
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC-CC-------------CC-ceEECCCCCEEEEEEecccccccC
Confidence 3455555443 478999999988874322111 11 11 4456666665555432
Q ss_pred ccccceeEEeecccceeeeeeeec--CC---CCcceEEEeecCCCCEEEEE-c--CCcEEEEeCCCCceeeee-eecCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYP--HA---HDFNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNI-VDMKPS 181 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~--~~---h~~~v~~l~~~~~~~~l~s~-~--d~~i~lwd~~~~~~~~~~-~~~~~~ 181 (421)
.....+.+||..+. +.++.+. .. +......++++|||++|+++ . +++|.+||+. ..+.+.. +.
T Consensus 78 ~~~~~v~v~d~~t~---~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~-~~~~~~~~i~---- 149 (361)
T 2oiz_A 78 KRSDVVEVWDADKL---TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA-KGDYVEDVTA---- 149 (361)
T ss_dssp CEEEEEEEEETTTC---CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT-TTEEEEEEGG----
T ss_pred CCCCEEEEEECcCC---cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC-CCcEEEEEec----
Confidence 11346889988765 4444431 11 23456789999999999987 3 6899999999 4555544 31
Q ss_pred CCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCc-ccccccc--hhhhccccccCCCcccccccccceeEEEEcCC
Q 014644 182 NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ-SALCDHS--ARILRDAAESHGSKSFFTEIIASISDIKFAND 258 (421)
Q Consensus 182 ~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~--~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (421)
. .....+.+.|++...+++.+.||.+.+|++.. ++..... ...+.. ...+ ..+.++|+
T Consensus 150 ----~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~ 210 (361)
T 2oiz_A 150 ----A-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV-------------KDDP-IFIAPALD 210 (361)
T ss_dssp ----G-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT-------------TTSC-BCSCCEEC
T ss_pred ----C-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC-------------CCCc-eEEEeccc
Confidence 1 12233567887757888889999999999865 3221000 011111 1111 23344677
Q ss_pred CCEEEEecC-CeEEEEECCCCCc-ceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC-----------C
Q 014644 259 GQHLLSRDY-MNLKLWDIRMDST-PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY-----------S 325 (421)
Q Consensus 259 ~~~l~~~~~-~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~-----------d 325 (421)
+..++..+. +.+.++|+..... ....+.......... .. .......++|+|+++.++++.. .
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~--~~---~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK--NW---VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT--TC---EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc--cc---ccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 776665555 8999999864221 112221111000000 00 0000023789999888776543 3
Q ss_pred CeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCC--CC--CccccccccccCeEEEE
Q 014644 326 NLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENS--SS--GHHELSYNLSSKLLHLA 400 (421)
Q Consensus 326 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~--~~--~~~~~~~~~~~~v~~~~ 400 (421)
+.|.+||+.+. +....+..+. ...++++|+ ++ +|++++. +. .+|+ .+ +.+............++
T Consensus 286 ~~v~viD~~t~-~~v~~i~~~~--p~~ia~spd--g~-----~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 286 AEIWVMDTKTK-QRVARIPGRD--ALSMTIDQQ--RN-----LMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp SEEEEEETTTT-EEEEEEECTT--CCEEEEETT--TT-----EEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEE
T ss_pred ceEEEEECCCC-cEEEEEecCC--eeEEEECCC--CC-----EEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEE
Confidence 58999999987 6677777776 889999998 44 6777666 66 9993 33 33333346677788999
Q ss_pred EccCCC
Q 014644 401 WHPTTN 406 (421)
Q Consensus 401 ~spd~~ 406 (421)
++|||.
T Consensus 355 ~~p~G~ 360 (361)
T 2oiz_A 355 FHPVGG 360 (361)
T ss_dssp ECCCSC
T ss_pred ecCCCC
Confidence 999986
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.59 E-value=1.1e-11 Score=108.87 Aligned_cols=274 Identities=8% Similarity=-0.006 Sum_probs=177.8
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
...+.++.+ ++++.++++...++.|.+||.. ++......
T Consensus 14 ~~~~~~i~~--d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~-------------------------------------- 52 (299)
T 2z2n_A 14 DTGPYGITV--SDKGKVWITQHKANMISCINLD-GKITEYPL-------------------------------------- 52 (299)
T ss_dssp SCCEEEEEE--CTTSCEEEEETTTTEEEEECTT-CCEEEEEC--------------------------------------
T ss_pred CCCccceEE--CCCCCEEEEecCCCcEEEEcCC-CCeEEecC--------------------------------------
Confidence 457889998 7888888877778899999987 54222110
Q ss_pred ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
..+...+.++++.+++.++++. .++.|..|+.. ++. ..+. +......+.
T Consensus 53 ----------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~-~~~~-----~~~~~~~~~ 102 (299)
T 2z2n_A 53 ----------------------PTPDAKVMCLTISSDGEVWFTENAANKIGRITKK--GII-KEYT-----LPNPDSAPY 102 (299)
T ss_dssp ----------------------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-EEEE-----CSSTTCCEE
T ss_pred ----------------------CcccCceeeEEECCCCCEEEeCCCCCeEEEECCC--CcE-EEEe-----CCCcCCCce
Confidence 1223568889999999988888 78899999986 222 2221 122345688
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeE
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNL 270 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i 270 (421)
++++.|++ .++++...++.|..||. ++... .+.. ......+..++++++|++.++... +.|
T Consensus 103 ~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~-----~~~~-----------~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 103 GITEGPNG-DIWFTEMNGNRIGRITD-DGKIR-----EYEL-----------PNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp EEEECTTS-CEEEEETTTTEEEEECT-TCCEE-----EEEC-----------SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred eeEECCCC-CEEEEecCCceEEEECC-CCCEE-----EecC-----------CCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 99999998 77777667889999998 44321 1111 001346789999999988887765 889
Q ss_pred EEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCc
Q 014644 271 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNEN 350 (421)
Q Consensus 271 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 350 (421)
..||. + ++... +....... .+.+++++++|++.++...++.|.+||. ++......+..+...+
T Consensus 165 ~~~~~-~-g~~~~-~~~~~~~~-------------~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 165 GRITE-S-GDITE-FKIPTPAS-------------GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp EEECT-T-CCEEE-EECSSTTC-------------CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEEcC-C-CcEEE-eeCCCCCC-------------cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 99998 4 54432 22111110 1268999999997777667889999998 5532222233344556
Q ss_pred cceeeecCCcccccccceeeeecccCc-ccCCCCCccccc--cccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 351 RKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGHHELS--YNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~~~~~--~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
..+++.++ +. .+++...++. ..|+..+..... ......+.++++ +++++.++...+++..++
T Consensus 228 ~~i~~~~~--g~-----l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 228 HAITAGAG--ID-----LWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLT 292 (299)
T ss_dssp EEEEECST--TC-----EEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEE
T ss_pred eeEEECCC--CC-----EEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEE
Confidence 66777665 33 4444434444 555333222221 123457889999 999988887777887765
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.59 E-value=4.7e-13 Score=120.52 Aligned_cols=207 Identities=10% Similarity=-0.029 Sum_probs=132.2
Q ss_pred ceEEEeecCCCCEEEEE-cC---Cc--EEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC----
Q 014644 140 NINSISNNSDCETFVSA-DD---LR--INLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR---- 209 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d---~~--i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---- 209 (421)
.+..++|+|||+.|+.. .+ +. |.+|++. +++...+. .+.. +.+++|+|++ +.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~-~g~~~~l~--------~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLE-TLSSKKIL--------EAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT-TTEEEEEE--------EESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECC-CCceEEEE--------cCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 46789999999999886 33 34 7777887 45544433 2223 8999999999 888777642
Q ss_pred -----------------------CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec
Q 014644 210 -----------------------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 210 -----------------------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
..|.+||+.+++.. +.+. . . .+..+.|+||| +++++.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~----~~l~-------------~-~-~~~~~~~spdg-~~~~~~ 188 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI----EEFE-------------K-P-RFSSGIWHRDK-IVVNVP 188 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEE----EEEE-------------E-E-TTCEEEEETTE-EEEEEE
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEE----eeec-------------C-C-CcccccCCCCe-EEEEEe
Confidence 56888898776531 1111 1 2 56789999999 776653
Q ss_pred C-C-------eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC--------CeEEE
Q 014644 267 Y-M-------NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS--------NLLRI 330 (421)
Q Consensus 267 ~-~-------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d--------g~i~i 330 (421)
. . ...||.+.+ ++.. .+..+ .. ...++|+|++|+.++.+ ..|++
T Consensus 189 ~~~~~~~~~~~~~l~~~d~-~~~~-~l~~~-~~-----------------~~~~spdg~~l~~~~~~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 189 HREIIPQYFKFWDIYIWED-GKEE-KMFEK-VS-----------------FYAVDSDGERILLYGKPEKKYMSEHNKLYI 248 (347)
T ss_dssp CCCSSCCSSCCEEEEEEET-TEEE-EEEEE-ES-----------------EEEEEECSSCEEEEECCSSSCCCSSCEEEE
T ss_pred cccccccccccccEEEeCC-CceE-EeccC-cc-----------------eeeECCCCCEEEEEEccccCCccccceEEE
Confidence 2 1 335554442 5433 33332 21 12339999998877744 46888
Q ss_pred EecCCCCCceeEEecCCCCccc-eeeecCCcccccccceeeeecccCc-ccCCCC-CccccccccccCeEEEEEccCCCe
Q 014644 331 FSHGVGSAGGITVEAGKNENRK-PILQAAPRARRSSLSNLTRGLYRQA-HENSSS-GHHELSYNLSSKLLHLAWHPTTNL 407 (421)
Q Consensus 331 wd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~~~~~~~~~~v~~~~~spd~~~ 407 (421)
|| ++ .....+..+...+.. +.|+ + . .++++..++. +|| .. +.......+...|.+++|+| .+
T Consensus 249 ~d--~~-~~~~l~~~~~~~~~~~~~~s-d-------g-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~ 313 (347)
T 2gop_A 249 YD--GK-EVMGILDEVDRGVGQAKIKD-G-------K-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IV 313 (347)
T ss_dssp EC--SS-CEEESSTTCCSEEEEEEEET-T-------E-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SE
T ss_pred EC--CC-ceEeccccCCcccCCccEEc-C-------c-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cE
Confidence 88 33 434444555666665 7776 5 4 6778888888 898 43 23333444567799999999 56
Q ss_pred EEEec
Q 014644 408 IACAN 412 (421)
Q Consensus 408 la~~~ 412 (421)
+++++
T Consensus 314 ~~~~~ 318 (347)
T 2gop_A 314 VYLKE 318 (347)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 55555
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=4.2e-12 Score=113.59 Aligned_cols=229 Identities=14% Similarity=0.129 Sum_probs=145.9
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccc
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWT 111 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 111 (421)
+...+.+++| ++++++++++..++.|.+||.++++...+.
T Consensus 43 ~~~~~~~~~~--~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-------------------------------------- 82 (333)
T 2dg1_A 43 KGLQLEGLNF--DRQGQLFLLDVFEGNIFKINPETKEIKRPF-------------------------------------- 82 (333)
T ss_dssp SCCCEEEEEE--CTTSCEEEEETTTCEEEEECTTTCCEEEEE--------------------------------------
T ss_pred cCccccCcEE--CCCCCEEEEECCCCEEEEEeCCCCcEEEEe--------------------------------------
Confidence 4456788899 688888788888899999998776532211
Q ss_pred cccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cC----CcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 112 ENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
..+...+.+++++|+|+++++. .+ +.|.+||.+ ++.....+. ...+
T Consensus 83 -----------------------~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~-----~~~~ 133 (333)
T 2dg1_A 83 -----------------------VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIE-----DLST 133 (333)
T ss_dssp -----------------------ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEEC-----SSSS
T ss_pred -----------------------eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEc-----cCcc
Confidence 1234568999999999988887 66 689999987 343332221 0123
Q ss_pred CCCeeEEEEecCCCCeEEEEEc------CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCC
Q 014644 187 TEVITSAEFHPIYCNLLAYSSS------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 260 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~------d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (421)
...+.+++++|++ +++++... .+.|..+|...++.. ..... ...+..++|+|+|+
T Consensus 134 ~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~--------------~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 134 AYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVT----PIIQN--------------ISVANGIALSTDEK 194 (333)
T ss_dssp CCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEE----EEEEE--------------ESSEEEEEECTTSS
T ss_pred CCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEE----EeecC--------------CCcccceEECCCCC
Confidence 4578999999998 77776543 245666665543321 11111 23578899999998
Q ss_pred EEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 261 HLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 261 ~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
.|+.+ .. +.|.+||+...+..+..+...... ..... ..+..++++++|++.++...++.|.+||.. + .
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~-----~~~~~---~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~ 264 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPY-----YFTGH---EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-Y 264 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE-----ECCSS---SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-C
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEE-----ecCCC---CCCCceEECCCCCEEEEEcCCCEEEEECCC-C-C
Confidence 66544 44 899999996434433322100000 00000 012579999999988888788999999984 3 4
Q ss_pred ceeEEecCCC------CccceeeecC
Q 014644 339 GGITVEAGKN------ENRKPILQAA 358 (421)
Q Consensus 339 ~~~~~~~~~~------~~~~~~~~~~ 358 (421)
....+..+.. .+..+++.++
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred EEEEEEcCCCccccccCcceEEECCC
Confidence 4444443332 5677888765
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=6.1e-13 Score=121.95 Aligned_cols=250 Identities=12% Similarity=0.015 Sum_probs=146.9
Q ss_pred EEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceee-------------ccCCCCcee
Q 014644 38 RVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMN-------------EHNPPSFAH 104 (421)
Q Consensus 38 ~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------------~~~~~~~~~ 104 (421)
.+.| +|++++|+.++.++.|.+||+.+++...+...... |.+....+.. ..+++++..
T Consensus 85 ~~~~--spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~ 155 (396)
T 3c5m_A 85 GGFI--STDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSW 155 (396)
T ss_dssp TCEE--CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT-------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred cceE--CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc-------cCCCCCEEEeccCCccccccccccccCCCCcc
Confidence 3778 79999999999999999999998875555432211 1111111111 234444444
Q ss_pred eeeccc---ccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE-cC------CcEEEEeCCCCceee
Q 014644 105 GYHLEW---TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA-DD------LRINLWNLEISDQCF 173 (421)
Q Consensus 105 ~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~-~d------~~i~lwd~~~~~~~~ 173 (421)
+..... .....+.+|++.++ +..... .+...+..+.|+| +++.|+.. .+ ..|.+|++. ++...
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g---~~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~~ 229 (396)
T 3c5m_A 156 EKFAEFYHTNPTCRLIKVDIETG---ELEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNVR 229 (396)
T ss_dssp HHHHHHHHTCCCEEEEEEETTTC---CEEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCCE
T ss_pred eeeeeeccCCCcceEEEEECCCC---cEEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC-CCcee
Confidence 433321 22336777887765 443333 4566789999999 78877764 32 468888886 33322
Q ss_pred eeeecCCCCCCcc-CCCeeEEEEecCCCCeEEEEEcC-----CeEEEEECCcccccccchhhhccccccCCCcccccccc
Q 014644 174 NIVDMKPSNMDDL-TEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 247 (421)
Q Consensus 174 ~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 247 (421)
.+. ... ...+..++|+|++ +.|+.++.+ +.|++||+.+++.. .+... .
T Consensus 230 ~l~-------~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~----~l~~~--------------~ 283 (396)
T 3c5m_A 230 KIK-------EHAEGESCTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLENE----EVMVM--------------P 283 (396)
T ss_dssp ESS-------CCCTTEEEEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCEE----EEEEC--------------C
T ss_pred Eee-------ccCCCccccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCeE----EeeeC--------------C
Confidence 221 111 2357889999999 777666543 45999999876532 11111 1
Q ss_pred cceeEEEEcC-CCCEEEEec----------------C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeE
Q 014644 248 ASISDIKFAN-DGQHLLSRD----------------Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFE 309 (421)
Q Consensus 248 ~~v~~~~~s~-~~~~l~~~~----------------~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
... +.|+| ||++++.+. . ..|++||+.+ ++. ..+..+...... +..+....+..
T Consensus 284 -~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~~~~~~~----~~~~~~~~~~~ 355 (396)
T 3c5m_A 284 -PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA-KSA-QKLCKHSTSWDV----LDGDRQITHPH 355 (396)
T ss_dssp -SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT-TBC-CEEEECCCCCCC----BTTBSSTTCCC
T ss_pred -CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc-Cce-EEccCCCCcccc----ccccccCCCCC
Confidence 122 88999 999888642 2 6899999975 543 344443321000 00000000146
Q ss_pred EEEcCCCCEEEEeeC-CCe--EEEEecCCC
Q 014644 310 CSVSGDGLHFATGSY-SNL--LRIFSHGVG 336 (421)
Q Consensus 310 ~~~sp~~~~l~~~s~-dg~--i~iwd~~~~ 336 (421)
++|+|+|+.|+..+. ++. |+..++.++
T Consensus 356 ~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 356 PSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp CEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 789999998887765 454 444555544
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=3.9e-12 Score=111.24 Aligned_cols=160 Identities=10% Similarity=0.124 Sum_probs=114.2
Q ss_pred CCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEE
Q 014644 137 HDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLV 215 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iw 215 (421)
+...+.+++++|+|+++++. .++.|.+||.. ++....+.. ..+...+.+++++|++ +++++...++.|++|
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~-----~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~ 190 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGC-----SKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVF 190 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEEC-----TTTCSSEEEEEECSSS-EEEEEEGGGTEEEEE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCC-----CCccCCcEEEEECCCC-CEEEEECCCCEEEEE
Confidence 44567899999999988887 78999999976 444443311 2344568999999998 777777789999999
Q ss_pred ECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C-eEEEEECCCCCcceeEEeeccCccc
Q 014644 216 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M-NLKLWDIRMDSTPVATFKIHEHLRP 293 (421)
Q Consensus 216 d~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~~~~~~~~~ 293 (421)
|..... . ..+.. .++...+..++++++|+++++... + .|.+||.. ++.+..+..+....
T Consensus 191 ~~~g~~-~----~~~~~-----------~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~--g~~~~~~~~~~~~~- 251 (286)
T 1q7f_A 191 NYEGQY-L----RQIGG-----------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--GQLISALESKVKHA- 251 (286)
T ss_dssp ETTCCE-E----EEESC-----------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--SCEEEEEEESSCCS-
T ss_pred cCCCCE-E----EEEcc-----------CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--CCEEEEEcccCCCC-
Confidence 975421 1 22211 011246789999999988888754 5 99999964 66666665543221
Q ss_pred ccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 294 KLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.+.+++++|+|+++++ +.++.|++|++...
T Consensus 252 ------------~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 252 ------------QCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ------------CEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ------------cceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 1158999999987766 67999999998653
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.56 E-value=2.7e-12 Score=112.90 Aligned_cols=230 Identities=11% Similarity=0.036 Sum_probs=150.0
Q ss_pred ccccEEEEEEEEcCCCC-eEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 32 IEEKINRVRWCAAPNGS-MFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~-~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
+.....++.| +++++ +++++..++.|..||..++ ...+
T Consensus 26 ~~~~~eg~~~--d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~-------------------------------------- 64 (296)
T 3e5z_A 26 GFTWTEGPVY--VPARSAVIFSDVRQNRTWAWSDDGQ-LSPE-------------------------------------- 64 (296)
T ss_dssp CCSSEEEEEE--EGGGTEEEEEEGGGTEEEEEETTSC-EEEE--------------------------------------
T ss_pred CCccccCCeE--eCCCCEEEEEeCCCCEEEEEECCCC-eEEE--------------------------------------
Confidence 3455678999 68887 7888888999999998774 2211
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV 189 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 189 (421)
..+...+.+++++++|+++++. .++.|.+||.. .++........ .......
T Consensus 65 ------------------------~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~-~g~~~~~~~~~---~~~~~~~ 116 (296)
T 3e5z_A 65 ------------------------MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP-GGEWESIADSF---EGKKLNS 116 (296)
T ss_dssp ------------------------ESSCSSEEEEEECTTCCEEEEETTTTEEEEECST-TCCEEEEECEE---TTEECCC
T ss_pred ------------------------ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC-CCcEEEEeecc---CCCCCCC
Confidence 2344568899999999988888 77899999996 34333222100 0111235
Q ss_pred eeEEEEecCCCCeEEEE----Ec-------------CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 190 ITSAEFHPIYCNLLAYS----SS-------------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 190 v~~~~~~p~~~~~l~s~----~~-------------d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
+..++++|+| +++++. +. .+.|..++.. ++. ..+.. +......
T Consensus 117 ~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~~~-------------~~~~~~g 176 (296)
T 3e5z_A 117 PNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-----SAPIR-------------DRVKPNG 176 (296)
T ss_dssp CCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-----EEEEC-------------CCSSEEE
T ss_pred CCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCE-----EEeec-------------CCCCCcc
Confidence 6789999999 877763 21 3455555544 321 11111 1345689
Q ss_pred EEEcCCCCEEEEecC-CeEEEEECCCCCcc---eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeE
Q 014644 253 IKFANDGQHLLSRDY-MNLKLWDIRMDSTP---VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLL 328 (421)
Q Consensus 253 ~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i 328 (421)
++|+|+|+.+++... +.|++|++...+.. ...+..+.... .+++++++|++.++. ++.|
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p---------------~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT---------------DGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC---------------CSEEEBTTSCEEEEE--TTEE
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC---------------CeEEECCCCCEEEEc--CCeE
Confidence 999999998866655 89999998632443 22221111111 579999999876665 8899
Q ss_pred EEEecCCCCCceeEEecCCCCccceeee-cCCcccccccceeeeecccCc
Q 014644 329 RIFSHGVGSAGGITVEAGKNENRKPILQ-AAPRARRSSLSNLTRGLYRQA 377 (421)
Q Consensus 329 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~d~~ 377 (421)
.+|+.. + .....+..+.. +..++|. ++ ++ .|..++.++.
T Consensus 240 ~~~~~~-g-~~~~~~~~~~~-~~~~~f~~~d--~~-----~L~v~t~~~l 279 (296)
T 3e5z_A 240 HVLTPD-G-DELGRVLTPQT-TSNLCFGGPE--GR-----TLYMTVSTEF 279 (296)
T ss_dssp EEECTT-S-CEEEEEECSSC-CCEEEEESTT--SC-----EEEEEETTEE
T ss_pred EEECCC-C-CEEEEEECCCC-ceeEEEECCC--CC-----EEEEEcCCeE
Confidence 999986 3 55666666666 7888885 44 22 5666665554
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=1.8e-12 Score=117.23 Aligned_cols=255 Identities=7% Similarity=-0.036 Sum_probs=155.9
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-c----------CCcEEEEeCCCCceeeeeeecCCCC
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D----------DLRINLWNLEISDQCFNIVDMKPSN 182 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~----------d~~i~lwd~~~~~~~~~~~~~~~~~ 182 (421)
..+.+||..+. +.+..+ ..+..+ .++|+||+++|+++ . +++|.+||.. ..+....+.+.+..
T Consensus 31 ~~v~v~D~~t~---~~~~~i-~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~-t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTNG---KFLGMV-PTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD-KLTFEKEISLPPKR 103 (361)
T ss_dssp CEEEEEETTTC---CEEEEE-ECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT-TCCEEEEEEECTTB
T ss_pred CeEEEEECCCC---eEEEEe-cCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc-CCcEEEEEEcCccc
Confidence 47888887766 555666 455554 89999999999986 3 5679999998 45555554322111
Q ss_pred CCccCCCeeEEEEecCCCCeEEEEEc--CCeEEEEECCcccccccchhh-hccccccCCCcccccccccceeEEEEcCCC
Q 014644 183 MDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRLVDMRQSALCDHSARI-LRDAAESHGSKSFFTEIIASISDIKFANDG 259 (421)
Q Consensus 183 ~~~~~~~v~~~~~~p~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~-~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (421)
..+......++|+|+| ++|+++.. +++|.+||+.+++.. .. +.. .....+.+.|++
T Consensus 104 -~~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~----~~~i~~---------------~~~~~v~~~p~~ 162 (361)
T 2oiz_A 104 -VQGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYV----EDVTAA---------------AGCWSVIPQPNR 162 (361)
T ss_dssp -CCBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEE----EEEGGG---------------TTEEEEEECTTS
T ss_pred -cccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEE----EEEecC---------------CCcceeEEcCCC
Confidence 1123456789999999 88888764 589999999987643 22 222 122335677776
Q ss_pred -CEEEEe-cCCeEEEEECCCCCcceeEEe------eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEE
Q 014644 260 -QHLLSR-DYMNLKLWDIRMDSTPVATFK------IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIF 331 (421)
Q Consensus 260 -~~l~~~-~~~~i~i~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iw 331 (421)
..+++. .+|.+.+|++...++...... ..... ..+.++|++..++..+.++.|+++
T Consensus 163 ~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~~g~~~~~~~~~~~v~v~ 226 (361)
T 2oiz_A 163 PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP----------------IFIAPALDKDKAHFVSYYGNVYSA 226 (361)
T ss_dssp SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC----------------BCSCCEECSSEEEEEBTTSEEEEE
T ss_pred CeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc----------------eEEEecccCCEEEEEeCCCeEEEE
Confidence 344444 448888898865454442211 11111 123456778787878889999999
Q ss_pred ecCCCCCce-eEEecC----------CCCccceeeecCCcccccccceeeeecc---------cC--c-ccCCC--CCcc
Q 014644 332 SHGVGSAGG-ITVEAG----------KNENRKPILQAAPRARRSSLSNLTRGLY---------RQ--A-HENSS--SGHH 386 (421)
Q Consensus 332 d~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~g~~---------d~--~-~iw~~--~~~~ 386 (421)
|+....... ..+... ......++++++ +. .++.... ++ . .+|+. .+.+
T Consensus 227 d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d--g~-----~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v 299 (361)
T 2oiz_A 227 DFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA--SG-----RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV 299 (361)
T ss_dssp ECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT--TT-----EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE
T ss_pred EecCCCceecccccccCccccccccccCCeeEEEEecC--CC-----eEEEEEccCCCcccccCCCceEEEEECCCCcEE
Confidence 997553221 111100 011223677776 22 3333221 12 2 44432 2333
Q ss_pred ccccccccCeEEEEEccCCCeEEEecCCceEEEeC
Q 014644 387 ELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHYA 421 (421)
Q Consensus 387 ~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~~ 421 (421)
.....+. +..++|+|||++|++++.+.+.+|++
T Consensus 300 ~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~ 332 (361)
T 2oiz_A 300 ARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDI 332 (361)
T ss_dssp EEEECTT--CCEEEEETTTTEEEEECSSCEEEEEC
T ss_pred EEEecCC--eeEEEECCCCCEEEEeCCCeEEEEEC
Confidence 3333333 89999999999999888888999974
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.54 E-value=9e-13 Score=131.04 Aligned_cols=237 Identities=8% Similarity=-0.004 Sum_probs=144.7
Q ss_pred CCCCcceEEEeecCCCCEEEEE-c-C----CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc
Q 014644 135 HAHDFNINSISNNSDCETFVSA-D-D----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 208 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~-d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 208 (421)
.+|...+..++|||||++|+.+ . + ..|++||+. +++.+... .+...+.+++|+|| +.|+.++.
T Consensus 159 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~-tg~~~~~~--------~~~~~~~~~~wspD--~~l~~~~~ 227 (741)
T 1yr2_A 159 KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA-DGKPLADE--------LKWVKFSGLAWLGN--DALLYSRF 227 (741)
T ss_dssp ----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT-TCCEEEEE--------EEEEESCCCEESTT--SEEEEEEC
T ss_pred cCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC-CCCCCCcc--------CCCceeccEEEECC--CEEEEEEe
Confidence 3455578899999999999986 3 2 359999998 44443321 11122357899999 45555555
Q ss_pred CC--------------eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC------C
Q 014644 209 RG--------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY------M 268 (421)
Q Consensus 209 d~--------------~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------~ 268 (421)
++ .|++|++.++..... .++.. ..+...+..+.|+|||++|+.... .
T Consensus 228 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~--lv~~~-----------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 228 AEPKEGQAFQALNYNQTVWLHRLGTPQSADQ--PVFAT-----------PELPKRGHGASVSSDGRWVVITSSEGTDPVN 294 (741)
T ss_dssp CCC--------CCCCCEEEEEETTSCGGGCE--EEECC-----------TTCTTCEEEEEECTTSCEEEEEEECTTCSCC
T ss_pred cCcccccccccCCCCCEEEEEECCCCchhCE--EEecc-----------CCCCeEEEEEEECCCCCEEEEEEEccCCCcc
Confidence 44 388899876542211 11221 111235789999999998886532 4
Q ss_pred eEEEEECCCCC--cceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC----CCeEEEEecCCCC-Ccee
Q 014644 269 NLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY----SNLLRIFSHGVGS-AGGI 341 (421)
Q Consensus 269 ~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~----dg~i~iwd~~~~~-~~~~ 341 (421)
.|++||+.+ + +....+..+.... ... ++|+|+.|+..+. ++.|++||+.++. ....
T Consensus 295 ~l~~~d~~~-~~~~~~~~l~~~~~~~---------------~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 357 (741)
T 1yr2_A 295 TVHVARVTN-GKIGPVTALIPDLKAQ---------------WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDT 357 (741)
T ss_dssp EEEEEEEET-TEECCCEEEECSSSSC---------------EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEE
T ss_pred eEEEEECCC-CCCcccEEecCCCCce---------------EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEE
Confidence 899999975 4 3144454443322 233 3588988887775 3459999988642 3344
Q ss_pred EEecCCCCccceeeecCCcccccccceeeeecccCc-ccC--C-CCCcccccc-ccccCeEEEEEccCCCeEEEec----
Q 014644 342 TVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--S-SSGHHELSY-NLSSKLLHLAWHPTTNLIACAN---- 412 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~-~~~~~~~~~-~~~~~v~~~~~spd~~~la~~~---- 412 (421)
.+..+...+..+.+.. ..++++...++. +|| + .++...... .....|..++++|+++.|+...
T Consensus 358 l~~~~~~~l~~~~~~~--------~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 358 VVPESKDNLESVGIAG--------NRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp EECCCSSEEEEEEEEB--------TEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred EecCCCCeEEEEEEEC--------CEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 4444544444455542 226788888888 888 3 233222222 2356688999999998776443
Q ss_pred -CCceEEEe
Q 014644 413 -GNSLFFHY 420 (421)
Q Consensus 413 -~~~~~i~~ 420 (421)
...+++|+
T Consensus 430 ~P~~i~~~d 438 (741)
T 1yr2_A 430 QPATVLALD 438 (741)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEE
Confidence 24688876
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=5.2e-12 Score=125.01 Aligned_cols=261 Identities=10% Similarity=-0.018 Sum_probs=153.5
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeCCC-----cEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTNDK-----TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~d~-----~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
|+..+..++| +|||++||.++.++ +|++||+.+++........ ..+.+++|++....+........... .
T Consensus 123 ~~~~~~~~~~--SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~-~ 197 (710)
T 2xdw_A 123 GTVALRGYAF--SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGK-S 197 (710)
T ss_dssp SCEEEEEEEE--CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSC-C
T ss_pred CCEEEEEEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccc-c
Confidence 4446888999 79999999876654 8999999998854332211 11233444443333332222111000 0
Q ss_pred eccc-c--cccceeEEeeccccee-eeeeeecCCCCcceEEEeecCCCCEEEEE-c-----CCcEEEEeCCC------Cc
Q 014644 107 HLEW-T--ENMATKIANVGNSVHA-RCQKVYPHAHDFNINSISNNSDCETFVSA-D-----DLRINLWNLEI------SD 170 (421)
Q Consensus 107 ~g~~-~--~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~-----d~~i~lwd~~~------~~ 170 (421)
.+.. . ....+.+|++.+.... ..+... ..|...+..+.|+|||++|+.+ . +..|++||+.. ..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred cccccccCCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 0000 0 0124777888765221 122222 3355668899999999999875 4 56899999973 22
Q ss_pred eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC----CeEEEEECCcccccccchhhhccccccCCCccccccc
Q 014644 171 QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 246 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 246 (421)
.....+ ..+...+.. .|+|+| ..|+..+.. +.|.+||+.++... ..+.+..| .
T Consensus 277 ~~~~~l-------~~~~~~~~~-~~s~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~~~------------~ 333 (710)
T 2xdw_A 277 LKWVKL-------IDNFEGEYD-YVTNEG-TVFTFKTNRHSPNYRLINIDFTDPEES--KWKVLVPE------------H 333 (710)
T ss_dssp CCCEEE-------ECSSSSCEE-EEEEET-TEEEEEECTTCTTCEEEEEETTSCCGG--GCEEEECC------------C
T ss_pred cceEEe-------eCCCCcEEE-EEeccC-CEEEEEECCCCCCCEEEEEeCCCCCcc--cceeccCC------------C
Confidence 123322 334444544 488998 666655543 36999998875310 00111111 1
Q ss_pred c-cceeEEEEcCCCCEEEEecC-C--eEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe
Q 014644 247 I-ASISDIKFANDGQHLLSRDY-M--NLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG 322 (421)
Q Consensus 247 ~-~~v~~~~~s~~~~~l~~~~~-~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~ 322 (421)
. ..+..++|++++.++++... + .|++|++.+ ++.+..+..+...+ ..++++|++..++..
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-g~~~~~l~~~~~~v---------------~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-GALLKIFPLEVGSV---------------VGYSGQKKDTEIFYQ 397 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-CCEEEEECCCSSEE---------------EEEECCTTCSEEEEE
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-CCEEEecCCCCceE---------------EEEecCCCCCEEEEE
Confidence 1 25778899977777777643 4 577778754 66666666553322 578899998766533
Q ss_pred -e---CCCeEEEEecCCCC
Q 014644 323 -S---YSNLLRIFSHGVGS 337 (421)
Q Consensus 323 -s---~dg~i~iwd~~~~~ 337 (421)
+ ..+.|++||+.++.
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 2 35789999998774
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=2e-11 Score=108.06 Aligned_cols=203 Identities=12% Similarity=0.037 Sum_probs=129.2
Q ss_pred cEEEEEEEEcCCCCeEEE-------EeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeee
Q 014644 35 KINRVRWCAAPNGSMFIL-------STNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYH 107 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t-------~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (421)
...+++| ++++.++++ +..++.|.+||..+++...+.. +
T Consensus 19 ~~~~~~~--~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---~----------------------------- 64 (314)
T 1pjx_A 19 GAEGPVF--DKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK---P----------------------------- 64 (314)
T ss_dssp TCEEEEE--CTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC---C-----------------------------
T ss_pred CccCceE--CCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe---c-----------------------------
Confidence 4578999 688888888 6778999999987765332211 0
Q ss_pred cccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCC-CCEEEEEcCCcEEEEeCCCCceeeee-eecCCCCCCc
Q 014644 108 LEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSD-CETFVSADDLRINLWNLEISDQCFNI-VDMKPSNMDD 185 (421)
Q Consensus 108 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~d~~i~lwd~~~~~~~~~~-~~~~~~~~~~ 185 (421)
.. .++...+.+++++++ ++++++...+.|.+||.+ . +.... ... ....
T Consensus 65 ------------------------~~-~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g-~~~~~~~~~---~~~~ 114 (314)
T 1pjx_A 65 ------------------------EV-NGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-G-TFEEIAKKD---SEGR 114 (314)
T ss_dssp ------------------------EE-TTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-S-CEEECCSBC---TTSC
T ss_pred ------------------------cc-CCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-C-CEEEEEecc---CCCc
Confidence 00 234456889999999 776766644478899987 3 33222 110 0011
Q ss_pred cCCCeeEEEEecCCCCeEEEEEcC---------------CeEEEEECCcccccccchhhhccccccCCCcccccccccce
Q 014644 186 LTEVITSAEFHPIYCNLLAYSSSR---------------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 186 ~~~~v~~~~~~p~~~~~l~s~~~d---------------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v 250 (421)
....+.+++++|++ +++++...+ +.|..||.. ++.. ..... ....
T Consensus 115 ~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~----~~~~~--------------~~~~ 174 (314)
T 1pjx_A 115 RMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI----QVDTA--------------FQFP 174 (314)
T ss_dssp BCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE----EEEEE--------------ESSE
T ss_pred cccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEE----EeccC--------------CCCc
Confidence 23458899999998 777766554 567777754 3321 11111 2346
Q ss_pred eEEEEc----CCCCEEEEe-cC-CeEEEEECCCCCcc-----eeEEeecc-CcccccccccCCCcceeeeEEEEcCCCCE
Q 014644 251 SDIKFA----NDGQHLLSR-DY-MNLKLWDIRMDSTP-----VATFKIHE-HLRPKLCDLYNNDSIFDKFECSVSGDGLH 318 (421)
Q Consensus 251 ~~~~~s----~~~~~l~~~-~~-~~i~i~d~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 318 (421)
..++++ |+++.+..+ .. +.|.+||+...++. ...+..+. .. ...++++++|++
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~---------------p~~i~~d~~G~l 239 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG---------------ADGMDFDEDNNL 239 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE---------------EEEEEEBTTCCE
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC---------------CCceEECCCCCE
Confidence 789999 999766544 44 89999997621332 11111111 11 157999999998
Q ss_pred EEEeeCCCeEEEEecCCC
Q 014644 319 FATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 319 l~~~s~dg~i~iwd~~~~ 336 (421)
.++...++.|.+||..++
T Consensus 240 ~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp EEEEETTTEEEEECTTCB
T ss_pred EEEEcCCCEEEEEcCCCC
Confidence 888878899999998755
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=1.2e-10 Score=110.96 Aligned_cols=317 Identities=8% Similarity=-0.054 Sum_probs=190.6
Q ss_pred CCCCeEEEEeCCCcEEEeecCCceeE-EeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeec-
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKVK-KIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVG- 122 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 122 (421)
+.+.++++...+++|.++|..+++.. .+.. .. ....+.++++++++..++. ++.+.++|..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~---g~------------~p~~v~~SpDGr~lyv~~~--dg~V~viD~~~ 227 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT---GY------------AVHISRLSASGRYLFVIGR--DGKVNMIDLWM 227 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC---SS------------CEEEEEECTTSCEEEEEET--TSEEEEEETTS
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC---CC------------CccceEECCCCCEEEEEcC--CCeEEEEECCC
Confidence 34456777788999999999998733 3322 11 2234456667766665543 4568888874
Q ss_pred -ccceeeeeeeecCCCCcceEEEeec----CCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCC---ccCC-Cee
Q 014644 123 -NSVHARCQKVYPHAHDFNINSISNN----SDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMD---DLTE-VIT 191 (421)
Q Consensus 123 -~~~~~~~~~~~~~~h~~~v~~l~~~----~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~---~~~~-~v~ 191 (421)
+. +.+..+ ... .....++|+ |||++++++ .+++|.++|.. +.+.++.+.+...... .|.. .+.
T Consensus 228 ~t~---~~v~~i-~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~-t~~~~~~i~~~~~~~~~~~~~p~~rva 301 (567)
T 1qks_A 228 KEP---TTVAEI-KIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE-TLEPKKIQSTRGMTYDEQEYHPEPRVA 301 (567)
T ss_dssp SSC---CEEEEE-ECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT-TCCEEEEEECCEECTTTCCEESCCCEE
T ss_pred CCC---cEeEEE-ecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECC-CCcEEEEEeccccccccccccCCCceE
Confidence 44 445555 222 246789999 699998886 78999999988 5566665533211111 1223 678
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-Ce
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MN 269 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~ 269 (421)
.+..+++++.+++....+|.|.++|........ ...+.. ......+.|+|+|++++++. . +.
T Consensus 302 ~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~--v~~i~~--------------~~~~~d~~~~pdgr~~~va~~~sn~ 365 (567)
T 1qks_A 302 AILASHYRPEFIVNVKETGKILLVDYTDLNNLK--TTEISA--------------ERFLHDGGLDGSHRYFITAANARNK 365 (567)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEETTCSSEEE--EEEEEC--------------CSSEEEEEECTTSCEEEEEEGGGTE
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEecCCCccce--eeeeec--------------cccccCceECCCCCEEEEEeCCCCe
Confidence 888999885566666677999999987643110 011111 23466889999999987764 3 89
Q ss_pred EEEEECCCCCcceeEEee-ccCcccccccccCCCcceeeeEEE-EcCCCCEE-EEee-CCCeEEEEecCCCC------Cc
Q 014644 270 LKLWDIRMDSTPVATFKI-HEHLRPKLCDLYNNDSIFDKFECS-VSGDGLHF-ATGS-YSNLLRIFSHGVGS------AG 339 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~sp~~~~l-~~~s-~dg~i~iwd~~~~~------~~ 339 (421)
|.++|+.+ ++.+..+.. ...+-+. .... ++|++..+ +++. .++.|.++|..+.. +.
T Consensus 366 V~ViD~~t-~kl~~~i~vgg~~Phpg-------------~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kv 431 (567)
T 1qks_A 366 LVVIDTKE-GKLVAIEDTGGQTPHPG-------------RGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKI 431 (567)
T ss_dssp EEEEETTT-TEEEEEEECSSSSBCCT-------------TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred EEEEECCC-CcEEEEEeccCcCCCCc-------------cceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEE
Confidence 99999986 777666654 2211100 1233 57874444 4443 46899999998732 23
Q ss_pred eeEEecCCCCccceeeecCCcccccccceeeeec---cc----Cc-ccCCCCCc-----cc--ccc---------ccccC
Q 014644 340 GITVEAGKNENRKPILQAAPRARRSSLSNLTRGL---YR----QA-HENSSSGH-----HE--LSY---------NLSSK 395 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~---~d----~~-~iw~~~~~-----~~--~~~---------~~~~~ 395 (421)
...+.........+..+|+ ++ .|.... .| .. .+++.... .. ... .....
T Consensus 432 v~~i~~~g~g~~~i~~~p~--~~-----~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 504 (567)
T 1qks_A 432 LDSFPALGGGSLFIKTHPN--SQ-----YLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPR 504 (567)
T ss_dssp EEEEECSCSCCCCEECCTT--CS-----EEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCE
T ss_pred EEEEecCCCCCEEEEeCCC--CC-----eEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcc
Confidence 4555543322233445555 32 333322 11 12 44421111 10 111 12457
Q ss_pred eEEEEEccCCCeEEEec------CCceEEEeC
Q 014644 396 LLHLAWHPTTNLIACAN------GNSLFFHYA 421 (421)
Q Consensus 396 v~~~~~spd~~~la~~~------~~~~~i~~~ 421 (421)
+..+.|+|+|+.+.++. ++.|.+++.
T Consensus 505 ~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 505 VVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp EEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred eEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 88999999999877652 467888763
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.48 E-value=2.3e-11 Score=105.21 Aligned_cols=230 Identities=7% Similarity=-0.077 Sum_probs=144.6
Q ss_pred ceEEEeecCCCCEEE-EE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEEC
Q 014644 140 NINSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 217 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~-s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~ 217 (421)
...++++++++++++ +. .++.|.+|+.. ... ...+ ...+...+.++++++++ +++++.. ++.|.+||.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~-~~~-~~~~------~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATG-STG-TTVL------PFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAA 94 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------EEC------CCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCC-Ccc-cceE------eeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeC
Confidence 678999999999887 64 78899999976 222 2211 01233467889999998 7555554 889999998
Q ss_pred CcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccc
Q 014644 218 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC 296 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
...... .+.. .....+..++++++|+++++... +.|.+|+..+ .............
T Consensus 95 ~~~~~~-----~~~~------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~----- 151 (270)
T 1rwi_B 95 GSNNQT-----VLPF------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS-KTQTVLPFTGLND----- 151 (270)
T ss_dssp TCSCCE-----ECCC------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC-CSCEECCCCSCCS-----
T ss_pred CCceEe-----eeec------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCC-ceeEeeccccCCC-----
Confidence 764321 1111 01246789999999987777655 8899997653 2222111111111
Q ss_pred cccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccC
Q 014644 297 DLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQ 376 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~ 376 (421)
..+++++|+|+++++...++.|++||.... ........+......+++.++ +. .+++...++
T Consensus 152 ----------p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~--g~-----l~v~~~~~~ 213 (270)
T 1rwi_B 152 ----------PDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQVVLPFTDITAPWGIAVDEA--GT-----VYVTEHNTN 213 (270)
T ss_dssp ----------CCCEEECTTCCEEEEEGGGTEEEEECTTTC-CEEECCCSSCCSEEEEEECTT--CC-----EEEEETTTS
T ss_pred ----------ceeEEEeCCCCEEEEECCCCEEEEEecCCC-ceEeecccCCCCceEEEECCC--CC-----EEEEECCCC
Confidence 158999999997777777899999998765 222222223344566777665 33 555555555
Q ss_pred c-ccCCCCCcccccc--ccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 377 A-HENSSSGHHELSY--NLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 377 ~-~iw~~~~~~~~~~--~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
. ..|+......... .....+..++++|+|+++++.. ++.|.+|+
T Consensus 214 ~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 214 QVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred cEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 5 6663332222111 2235688999999999777766 67788875
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.48 E-value=2.4e-11 Score=108.44 Aligned_cols=232 Identities=6% Similarity=-0.091 Sum_probs=144.3
Q ss_pred ceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECC
Q 014644 140 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMR 218 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~ 218 (421)
....+.+. +++.+++. .++.|.+||.. ..+.+..+ . .......++++|++ +++++...++.|.+||+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~-t~~~~~~i-------~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~ 113 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDIN-TFKEVGRI-------T-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPK 113 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETT-TCCEEEEE-------E-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETT
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECc-ccEEEEEc-------C-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECC
Confidence 35666664 45555666 78999999998 45555544 1 23567899999998 655555489999999998
Q ss_pred cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--CCeEEEEECCCCCcceeEEeeccCcccccc
Q 014644 219 QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--YMNLKLWDIRMDSTPVATFKIHEHLRPKLC 296 (421)
Q Consensus 219 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
+++.. ..+... .. .........+++ .+++++++.. ++.|.++|+.+ ++.+..+.....+
T Consensus 114 t~~~~----~~i~~g-~~-------~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t-~~~~~~i~~g~~p----- 174 (328)
T 3dsm_A 114 TYEIT----GYIECP-DM-------DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTET-DKVVDELTIGIQP----- 174 (328)
T ss_dssp TTEEE----EEEECT-TC-------CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTT-TEEEEEEECSSCB-----
T ss_pred CCeEE----EEEEcC-Cc-------cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCC-CeEEEEEEcCCCc-----
Confidence 87643 222220 00 000114556777 4555555543 48999999987 7777776654433
Q ss_pred cccCCCcceeeeEEEEcCCCCEEEEeeCC----------CeEEEEecCCCCCceeEEecC-CCCccceeeecCCcccccc
Q 014644 297 DLYNNDSIFDKFECSVSGDGLHFATGSYS----------NLLRIFSHGVGSAGGITVEAG-KNENRKPILQAAPRARRSS 365 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~sp~~~~l~~~s~d----------g~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 365 (421)
..++++|+|++++++..+ +.|.++|..++ .....+... ......++++|+ ++
T Consensus 175 -----------~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~~~~~g~~p~~la~~~d--~~--- 237 (328)
T 3dsm_A 175 -----------TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQFKFKLGDWPSEVQLNGT--RD--- 237 (328)
T ss_dssp -----------CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEEECCTTCCCEEEEECTT--SC---
T ss_pred -----------cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC-eEEEEEecCCCCCceeEEEecC--CC---
Confidence 478999999977776654 78999999876 444444322 235678888887 33
Q ss_pred cceeeeecccCcccCCC--CCcccc-cccc-ccCeEEEEEccC-CCeEEEe----c-CCceEEEeC
Q 014644 366 LSNLTRGLYRQAHENSS--SGHHEL-SYNL-SSKLLHLAWHPT-TNLIACA----N-GNSLFFHYA 421 (421)
Q Consensus 366 ~~~l~~g~~d~~~iw~~--~~~~~~-~~~~-~~~v~~~~~spd-~~~la~~----~-~~~~~i~~~ 421 (421)
.|..... ...+|+. +..... .... ......++++|+ +.+.++. . .+.+++|+.
T Consensus 238 --~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 238 --TLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp --EEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred --EEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 4544443 2244422 222111 1111 356889999994 5555554 3 566888863
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=7.7e-12 Score=111.71 Aligned_cols=217 Identities=11% Similarity=0.055 Sum_probs=141.2
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCce--eEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK--VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
-.....+++ +++++++++...++.|++||.+... +..+......+
T Consensus 90 ~~~p~gia~--d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g------------------------------- 136 (329)
T 3fvz_A 90 FYLPHGLSI--DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG------------------------------- 136 (329)
T ss_dssp CSSEEEEEE--CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-------------------------------
T ss_pred cCCceEEEE--CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-------------------------------
Confidence 346788999 7889988888889999999976532 11111000000
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeecC-CCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCC---CCC
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNS-DCETFVSA--DDLRINLWNLEISDQCFNIVDMKPS---NMD 184 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~---~~~ 184 (421)
...++......++++| ++.++++. .++.|++|+.. +..+..+..... ...
T Consensus 137 ----------------------~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~--g~~~~~~~~~g~~~~~~~ 192 (329)
T 3fvz_A 137 ----------------------SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS--GKFVTQWGEESSGSSPRP 192 (329)
T ss_dssp ----------------------CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT--SCEEEEECEECCSSSCCT
T ss_pred ----------------------CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC--CCEEEEeccCCCCCCCCC
Confidence 0024455688999999 78888886 48999999955 555544411100 001
Q ss_pred ccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 185 DLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 185 ~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
++.....+++++|++..++++...++.|++||..+++.. ..+.. ..+...+..++++| +..+++
T Consensus 193 ~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~----~~~~~-----------~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 193 GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV----REIKH-----------ASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE----EEECC-----------TTTTTCEEEEEEET-TEEEEE
T ss_pred cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE----EEEec-----------cccCCCcceeeecC-CEEEEe
Confidence 233457899999993277777778899999999866543 22211 11234677889998 433333
Q ss_pred -------ecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC
Q 014644 265 -------RDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 265 -------~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~ 335 (421)
... ..|++||+.+ ++.+..+....... ....+++++|+|.++++...++.|++|++..
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~~~------------~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRKHF------------DMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSSCC------------SSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCCcc------------CCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 222 5899999986 77777663211100 0126899999998888888899999999864
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.46 E-value=9.8e-11 Score=101.45 Aligned_cols=226 Identities=8% Similarity=0.002 Sum_probs=146.2
Q ss_pred CCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeeccc
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNS 124 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 124 (421)
..+++|++++.|+.|.+||.++++............+. .....+++..+... ...+..++. ++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~------------~~~~~pdG~ilvs~----~~~V~~~d~-~G 65 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN------------SVAATKAGEILFSY----SKGAKMITR-DG 65 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC------------EEEECTTSCEEEEC----BSEEEEECT-TS
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc------------CeEECCCCCEEEeC----CCCEEEECC-CC
Confidence 34689999999999999999888844333221111122 22333344444421 223555555 33
Q ss_pred ceeeeeeeecCCCCcceEEEeecCCCCEEEEE-c-CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCe
Q 014644 125 VHARCQKVYPHAHDFNINSISNNSDCETFVSA-D-DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNL 202 (421)
Q Consensus 125 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 202 (421)
+.+..+..+....+.++.+.++|+++++. . ++.|..+|.+ ++.+..+.... ....+......+++.++| ++
T Consensus 66 ---~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~-~~~~~~~~~~~v~~~~~G-~~ 138 (276)
T 3no2_A 66 ---RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFET-GIERPHAQFRQINKNKKG-NY 138 (276)
T ss_dssp ---CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECC-SCSSGGGSCSCCEECTTS-CE
T ss_pred ---CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccC-CCCcccccccCceECCCC-CE
Confidence 56666622233578899999999999997 5 7777777764 55554443321 112222345667889999 99
Q ss_pred EEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcc
Q 014644 203 LAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTP 281 (421)
Q Consensus 203 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~ 281 (421)
+++...++.|..||.. ++.. ..+.. ...+.++...++|+.++++.+ +.|..+|..+ ++.
T Consensus 139 lv~~~~~~~v~~~d~~-G~~~----w~~~~--------------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t-G~~ 198 (276)
T 3no2_A 139 LVPLFATSEVREIAPN-GQLL----NSVKL--------------SGTPFSSAFLDNGDCLVACGDAHCFVQLNLES-NRI 198 (276)
T ss_dssp EEEETTTTEEEEECTT-SCEE----EEEEC--------------SSCCCEEEECTTSCEEEECBTTSEEEEECTTT-CCE
T ss_pred EEEecCCCEEEEECCC-CCEE----EEEEC--------------CCCccceeEcCCCCEEEEeCCCCeEEEEeCcC-CcE
Confidence 9999999999999987 6643 22222 134566788899999998876 7899999986 888
Q ss_pred eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee
Q 014644 282 VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS 323 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s 323 (421)
+..+........ ....+.+++..++|.++++..
T Consensus 199 ~w~~~~~~~~~~---------~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 199 VRRVNANDIEGV---------QLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEGGGSBSC---------CCSEEEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCCCc---------cccccccceEcCCCCEEEEec
Confidence 888864321100 112336788899999887764
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.46 E-value=4.6e-11 Score=103.34 Aligned_cols=238 Identities=7% Similarity=-0.048 Sum_probs=145.0
Q ss_pred cEEEEEEEEcCCCCeEE-EEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccc
Q 014644 35 KINRVRWCAAPNGSMFI-LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTEN 113 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~-t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 113 (421)
...++++ ++++++++ +.+.++.|.+||..+........ .... .+..+.+.+++....... .
T Consensus 25 ~p~~i~~--~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~-~~~~------------~p~~i~~~~~g~l~v~~~---~ 86 (270)
T 1rwi_B 25 SPSGVAV--DSAGNVYVTSEGMYGRVVKLATGSTGTTVLPF-NGLY------------QPQGLAVDGAGTVYVTDF---N 86 (270)
T ss_dssp CEEEEEE--CTTCCEEEEECSSSCEEEEECC-----EECCC-CSCC------------SCCCEEECTTCCEEEEET---T
T ss_pred CccceEE--CCCCCEEEEccCCCCcEEEecCCCcccceEee-CCcC------------CcceeEECCCCCEEEEcC---C
Confidence 5678888 78888777 55778999999976654322211 1111 122223333333222211 2
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeE
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITS 192 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 192 (421)
..+..++.... . ...+.......+..+++.++|+++++. .++.|.+|+... ...... .......+.+
T Consensus 87 ~~i~~~d~~~~---~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~-------~~~~~~~p~~ 154 (270)
T 1rwi_B 87 NRVVTLAAGSN---N-QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS-KTQTVL-------PFTGLNDPDG 154 (270)
T ss_dssp TEEEEECTTCS---C-CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC-CSCEEC-------CCCSCCSCCC
T ss_pred CEEEEEeCCCc---e-EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC-ceeEee-------ccccCCCcee
Confidence 34555655433 1 122212333568999999999988887 788999997652 221111 1222345788
Q ss_pred EEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEE
Q 014644 193 AEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLK 271 (421)
Q Consensus 193 ~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~ 271 (421)
++++|++ +++++...++.|.+||....... ..... ....+..++++++|.++++... +.|.
T Consensus 155 i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~----~~~~~-------------~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 155 VAVDNSG-NVYVTDTDNNRVVKLEAESNNQV----VLPFT-------------DITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp EEECTTC-CEEEEEGGGTEEEEECTTTCCEE----ECCCS-------------SCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred EEEeCCC-CEEEEECCCCEEEEEecCCCceE----eeccc-------------CCCCceEEEECCCCCEEEEECCCCcEE
Confidence 9999998 77776667889999998765322 11001 1246789999999977777654 8899
Q ss_pred EEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 272 LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 272 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
+|+... ... ......... .+.+++++|+|+++++...++.|+++++...
T Consensus 217 ~~~~~~-~~~-~~~~~~~~~--------------~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 217 KLLAGS-TTS-TVLPFTGLN--------------TPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EECTTC-SCC-EECCCCSCS--------------CEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred EEcCCC-Ccc-eeeccCCCC--------------CceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 999864 322 221111100 1268999999998888888999999998754
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=5.6e-10 Score=97.91 Aligned_cols=274 Identities=4% Similarity=-0.037 Sum_probs=173.6
Q ss_pred cccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 33 EEKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 33 ~~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
...+.++.+ ++++.++++...++.|.+||.. ++...+..
T Consensus 19 ~~~p~~i~~--d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~-------------------------------------- 57 (300)
T 2qc5_A 19 DSGPYGITS--SEDGKVWFTQHKANKISSLDQS-GRIKEFEV-------------------------------------- 57 (300)
T ss_dssp TCCEEEEEE--CTTSCEEEEETTTTEEEEECTT-SCEEEEEC--------------------------------------
T ss_pred CCCcceeeE--CCCCCEEEEcCCCCeEEEECCC-CceEEEEC--------------------------------------
Confidence 456788888 7888888887788999999977 54322110
Q ss_pred ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
..+...+.++++.++++++++. .++.|..||.. .. .. .+. +......+.
T Consensus 58 ----------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-~~-~~~-----~~~~~~~~~ 107 (300)
T 2qc5_A 58 ----------------------PTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-FT-EYP-----LPQPDSGPY 107 (300)
T ss_dssp ----------------------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EE-EEE-----CSSTTCCEE
T ss_pred ----------------------CCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-eE-Eec-----CCCCCCCCc
Confidence 1223457889999999988887 78899999987 33 22 221 122335688
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeE
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNL 270 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i 270 (421)
++++.+++ .++++...++.|..+|.. ++.. .+.. ......+..+++.++|++.++... +.|
T Consensus 108 ~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~-----~~~~-----------~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 108 GITEGLNG-DIWFTQLNGDRIGKLTAD-GTIY-----EYDL-----------PNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EEEECSTT-CEEEEETTTTEEEEECTT-SCEE-----EEEC-----------SSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred cceECCCC-CEEEEccCCCeEEEECCC-CCEE-----EccC-----------CCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 99999998 777766668899999986 4322 1111 001346789999999997776654 889
Q ss_pred EEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCc
Q 014644 271 KLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNEN 350 (421)
Q Consensus 271 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~ 350 (421)
..+|. . ++... +....... .+.+++++++|++.++....+.|.+|+. ++......+..+...+
T Consensus 170 ~~~~~-~-g~~~~-~~~~~~~~-------------~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 232 (300)
T 2qc5_A 170 GRITN-T-GKLEE-YPLPTNAA-------------APVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARP 232 (300)
T ss_dssp EEECT-T-CCEEE-EECSSTTC-------------CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EEECC-C-CcEEE-eeCCCCCC-------------CcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCc
Confidence 99998 3 44332 32211110 1268999999987777667788999998 3322222233334445
Q ss_pred cceeeecCCcccccccceeeeecccCc-ccCCCCCccccc--cccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 351 RKPILQAAPRARRSSLSNLTRGLYRQA-HENSSSGHHELS--YNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~~~~~~~--~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
..+++.++ +. ..++...++. ..++..+..... ......+.++++.++|++.++... ++..|+
T Consensus 233 ~~i~~d~~--g~-----l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~ 297 (300)
T 2qc5_A 233 HAITAGKN--SE-----IWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLN 297 (300)
T ss_dssp EEEEECST--TC-----EEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEE
T ss_pred eEEEECCC--CC-----EEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeC
Confidence 56666655 33 4444433344 455333222211 122356889999999997776664 777665
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.45 E-value=7.4e-12 Score=123.58 Aligned_cols=225 Identities=9% Similarity=-0.029 Sum_probs=138.1
Q ss_pred cccccEEEEEEEEcCCCCeEE-----EEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 31 EIEEKINRVRWCAAPNGSMFI-----LSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~-----t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
+|+..+..++| +|||++|| .|+.+.+|++||+.+++... . .
T Consensus 118 ~~~~~~~~~~~--SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~----~-------------------------- 163 (695)
T 2bkl_A 118 DGTVSLGTWAV--SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--V----D-------------------------- 163 (695)
T ss_dssp SSCEEEEEEEE--CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--S----C--------------------------
T ss_pred CCCEEEEEEEE--CCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--C----c--------------------------
Confidence 45557889999 79999998 34445689999998876210 0 0
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCc-------------EEEEeCCCCce
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLR-------------INLWNLEISDQ 171 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~-------------i~lwd~~~~~~ 171 (421)
.+ ... ....++|+|||+.|+.+ .|.. |++|++.+...
T Consensus 164 --------------------------~~-~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 164 --------------------------VI-EGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp --------------------------CB-SCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred --------------------------cc-Ccc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 00 111 12578999999999987 6665 99999984332
Q ss_pred e-eeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC----eEEEEECCcccccccchhhhccccccCCCccccccc
Q 014644 172 C-FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG----FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI 246 (421)
Q Consensus 172 ~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~----~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~ 246 (421)
. ..+. ....+...+.++.|+|+| ++|+.++.++ .|.+||..++.. ..+.. +
T Consensus 215 ~~~lv~-----~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~-------------~ 270 (695)
T 2bkl_A 215 KDTVVH-----ERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKDF-----RLLVK-------------G 270 (695)
T ss_dssp GCEEEE-----CCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSSC-----EEEEE-------------C
T ss_pred hceEEE-----ecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCce-----EEeec-------------C
Confidence 1 1221 123455678899999999 7777776555 666666544321 12222 1
Q ss_pred ccceeEEEEcCCCCEEEEec----CCeEEEEECCCCCcc--eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEE
Q 014644 247 IASISDIKFANDGQHLLSRD----YMNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA 320 (421)
Q Consensus 247 ~~~v~~~~~s~~~~~l~~~~----~~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~ 320 (421)
...+....+ ++|.+++.+. .+.|.+||+.+ +.. ...+..+.... .+.+++|+ ++.+++
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~-------------~l~~~~~~-~~~lv~ 334 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK-PARASWKEIVPEDSSA-------------SLLSVSIV-GGHLSL 334 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB-CSGGGCEEEECCCSSC-------------EEEEEEEE-TTEEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC-CCccCCeEEecCCCCC-------------eEEEEEEE-CCEEEE
Confidence 334455556 5666444443 27899999875 432 23333332110 11567887 777888
Q ss_pred EeeCCCeEEEEecCCCCCceeEEecC-CCCccceeeecC
Q 014644 321 TGSYSNLLRIFSHGVGSAGGITVEAG-KNENRKPILQAA 358 (421)
Q Consensus 321 ~~s~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~ 358 (421)
+...|+..+||.+...+.....+..+ ...+..+.++++
T Consensus 335 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d 373 (695)
T 2bkl_A 335 EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLED 373 (695)
T ss_dssp EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTT
T ss_pred EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCC
Confidence 99999998888765322344445444 455666666665
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.42 E-value=6.3e-11 Score=106.50 Aligned_cols=246 Identities=11% Similarity=0.068 Sum_probs=141.2
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCC---C--cEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCC-C------
Q 014644 34 EKINRVRWCAAPNGSMFILSTND---K--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP-S------ 101 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d---~--~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~------ 101 (421)
..+..++| +|+|++|+.++.+ + .|.+|++.+++...+.... . +..++|++....+....... .
T Consensus 59 ~~~~~~~~--SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRI--SPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEE--CTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--E-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEE--CCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--C-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 45778999 7999999988764 2 4778888887755544322 2 55555555444333322110 0
Q ss_pred ---ceeeeecc-c--ccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cC------C-cEEEEeCC
Q 014644 102 ---FAHGYHLE-W--TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DD------L-RINLWNLE 167 (421)
Q Consensus 102 ---~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d------~-~i~lwd~~ 167 (421)
..+...|. + .....+.+|++..+ +.++.+ .. . .+..++|+||| +++++ .+ . ...||.++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~---~~~~~l-~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESE---EVIEEF-EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTT---EEEEEE-EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCC---eEEeee-cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 00000000 0 01235677777665 443334 23 3 78899999999 77776 43 2 45666555
Q ss_pred CCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC--------CeEEEEECCcccccccchhhhccccccCCC
Q 014644 168 ISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR--------GFVRLVDMRQSALCDHSARILRDAAESHGS 239 (421)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~ 239 (421)
.++...+. .+ ..+..+ +|+| +.|+.++.+ ..|.+|| +++.. .+...
T Consensus 207 -~~~~~~l~--------~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~----~l~~~------- 260 (347)
T 2gop_A 207 -DGKEEKMF--------EK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIYD--GKEVM----GILDE------- 260 (347)
T ss_dssp -TTEEEEEE--------EE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEEC--SSCEE----ESSTT-------
T ss_pred -CCceEEec--------cC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEEC--CCceE----ecccc-------
Confidence 44443332 23 444444 9999 777777644 3677888 33211 22222
Q ss_pred cccccccccceeE-EEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC
Q 014644 240 KSFFTEIIASISD-IKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 317 (421)
Q Consensus 240 ~~~~~~~~~~v~~-~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 317 (421)
+...+.. +.|+ |+ ++++++. +.++|| +. .++..... .+... +.+++|+| .
T Consensus 261 ------~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~g~~~~~~-~~~~~---------------v~~~~~s~--~ 312 (347)
T 2gop_A 261 ------VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-DGEIKPIA-KGRHW---------------IMGFDVDE--I 312 (347)
T ss_dssp ------CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-SSSEEEEE-CSSSE---------------EEEEEESS--S
T ss_pred ------CCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-CCceEEEe-cCCCe---------------EEeeeeeC--c
Confidence 2456775 8999 88 7777655 899999 87 35543333 33332 26889999 6
Q ss_pred EEEEeeCCCeE-EEEecCCCCCceeEEecCCC
Q 014644 318 HFATGSYSNLL-RIFSHGVGSAGGITVEAGKN 348 (421)
Q Consensus 318 ~l~~~s~dg~i-~iwd~~~~~~~~~~~~~~~~ 348 (421)
++++++.++.. .||.+. + . ...+..|..
T Consensus 313 ~~~~~~~~~~~~~l~~~~-g-~-~~~lt~~n~ 341 (347)
T 2gop_A 313 VVYLKETATRLRELFTWD-G-E-EKQLTDYND 341 (347)
T ss_dssp EEEEEECSSSCCEEEEES-S-S-EEECCCTTS
T ss_pred EEEEEcCCCChHHheEeC-C-c-EEEeccccH
Confidence 77777766654 677665 3 2 334454443
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.41 E-value=2e-10 Score=102.48 Aligned_cols=179 Identities=12% Similarity=-0.041 Sum_probs=114.7
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cCCeEEEEE
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVD 216 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd 216 (421)
.....++++++++.+++. .++.|.+||.. +.+....+.... ..+.......+++ .++ .++++.. .++.|.++|
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~-t~~~~~~i~~g~--~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPK-TYEITGYIECPD--MDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKID 158 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETT-TTEEEEEEECTT--CCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECC-CCeEEEEEEcCC--ccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEE
Confidence 346788898888766666 79999999998 555554443211 0111124556777 333 4444433 489999999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-----------CeEEEEECCCCCcceeEE
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-----------MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------~~i~i~d~~~~~~~~~~~ 285 (421)
+.+++.. ..+.. ......++++|+|++++++.. +.|.++|..+ ++....+
T Consensus 159 ~~t~~~~----~~i~~--------------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~ 219 (328)
T 3dsm_A 159 TETDKVV----DELTI--------------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQF 219 (328)
T ss_dssp TTTTEEE----EEEEC--------------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEE
T ss_pred CCCCeEE----EEEEc--------------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEE
Confidence 9987643 22222 224578899999997776532 5799999986 7766666
Q ss_pred eeccC-cccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCce-eEEecCCCCccceeeecC
Q 014644 286 KIHEH-LRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGG-ITVEAGKNENRKPILQAA 358 (421)
Q Consensus 286 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~ 358 (421)
..... .. ..++++|+++.|+++.. .|.+||..++.... ..+.........+++.|+
T Consensus 220 ~~~~g~~p---------------~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~ 277 (328)
T 3dsm_A 220 KFKLGDWP---------------SEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPN 277 (328)
T ss_dssp ECCTTCCC---------------EEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTT
T ss_pred ecCCCCCc---------------eeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCC
Confidence 54321 11 68999999999887765 89999998763321 112222344556777764
No 197
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=2.6e-10 Score=100.62 Aligned_cols=234 Identities=11% Similarity=-0.009 Sum_probs=144.2
Q ss_pred CCCcceEEEeecCCCC-EEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEE
Q 014644 136 AHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 213 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~ 213 (421)
..........|+|+++ +++++ .++.|..|+.. +. ...+ ..+...+.+++++++| +++++...++.|.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~--~~~~-------~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT--VDVL-------LDATAFTNGNAVDAQQ-RLVHCEHGRRAIT 110 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC--EEEE-------EESCSCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC--EEEE-------eCCCCccceeeECCCC-CEEEEECCCCEEE
Confidence 3445577899999998 55666 88999999885 33 2222 2244668899999999 7666655668899
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE----ec--------------CCeEEEEEC
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS----RD--------------YMNLKLWDI 275 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~--------------~~~i~i~d~ 275 (421)
+|+.. ++.. .+..+.. ......+..++++|+|++.++ |. .+.|..+|.
T Consensus 111 ~~~~~-g~~~-----~~~~~~~--------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 111 RSDAD-GQAH-----LLVGRYA--------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp EECTT-SCEE-----EEECEET--------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred EECCC-CCEE-----EEEeccC--------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 99975 4321 1111000 001235678999999998886 32 145777776
Q ss_pred CCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC------CeEEEEecCCCCCc--eeEEecCC
Q 014644 276 RMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS------NLLRIFSHGVGSAG--GITVEAGK 347 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d------g~i~iwd~~~~~~~--~~~~~~~~ 347 (421)
.+ ++..... ....+ ..++|+||++.|+.+... +.|++|++..+... ........
T Consensus 177 ~~-g~~~~~~-~~~~p----------------~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 177 DG-SPLQRMA-DLDHP----------------NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp SS-CCCEEEE-EESSE----------------EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred CC-CcEEEEe-cCCCC----------------cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 54 4433322 21111 589999999988777665 78999998764210 11111122
Q ss_pred CCccceeeecCCcccccccceeeeecccCcccCCCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 348 NENRKPILQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~~iw~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
.....+++.++ |+ |..+..++..+|+..+...........+.+++|+|+++.|.+++.++++-++
T Consensus 239 ~~pdgi~~d~~--G~------lwv~~~~gv~~~~~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 239 GLPDGFCVDRG--GW------LWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp SCCCSEEECTT--SC------EEECCSSEEEEECTTSCEEEEEECSSCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred CCCCeEEECCC--CC------EEEecCCcEEEECCCCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 23345555554 33 3344444546664443333333333468899999999999988888887665
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.37 E-value=8.3e-11 Score=116.92 Aligned_cols=256 Identities=11% Similarity=0.017 Sum_probs=141.5
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeCC-----CcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTND-----KTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~d-----~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
|...+..++| +|||++||.++.+ .+|++||+.+++....... ...+..++|++. ..+.-........
T Consensus 161 ~~~~~~~~~~--SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--~~~~~~~~wspD-~~l~~~~~~~~~~--- 232 (741)
T 1yr2_A 161 GATALDAWAA--SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--WVKFSGLAWLGN-DALLYSRFAEPKE--- 232 (741)
T ss_dssp --EEEEEEEE--CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--EEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--CceeccEEEECC-CEEEEEEecCccc---
Confidence 3346788999 7999999988765 4699999999884332110 011123445444 3333222211100
Q ss_pred eccc-c--cccceeEEeeccccee-eeeeeecCCCCcceEEEeecCCCCEEEEE-cCC-----cEEEEeCCCCcee-eee
Q 014644 107 HLEW-T--ENMATKIANVGNSVHA-RCQKVYPHAHDFNINSISNNSDCETFVSA-DDL-----RINLWNLEISDQC-FNI 175 (421)
Q Consensus 107 ~g~~-~--~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~-----~i~lwd~~~~~~~-~~~ 175 (421)
.+.. + ....+.+|++.+.... ..+... ..+...+..+.|+|||++|+.. .++ .|++||+...... ...
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE
Confidence 0000 0 0124667777654221 222222 3344458899999999998876 543 7999999733112 333
Q ss_pred eecCCCCCCccCCCeeEEEEecCCCCeEEEEEc----CCeEEEEECCccc-ccccchhhhccccccCCCcccccccccce
Q 014644 176 VDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS----RGFVRLVDMRQSA-LCDHSARILRDAAESHGSKSFFTEIIASI 250 (421)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----d~~v~iwd~~~~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~~v 250 (421)
+ ..+...+... ++|++ ..|+..+. ++.|.+||+.++. .. ..++.. +...+
T Consensus 312 l-------~~~~~~~~~~-~~~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~---~~l~~~-------------~~~~l 366 (741)
T 1yr2_A 312 L-------IPDLKAQWDF-VDGVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRF---DTVVPE-------------SKDNL 366 (741)
T ss_dssp E-------ECSSSSCEEE-EEEET-TEEEEEECTTCTTCEEEEEECSSSSCEE---EEEECC-------------CSSEE
T ss_pred e-------cCCCCceEEE-EeccC-CEEEEEECCCCCCCEEEEEeCCCCcccc---EEEecC-------------CCCeE
Confidence 2 2333444444 35888 77777665 3569999987642 11 122222 13456
Q ss_pred eEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe----eCC
Q 014644 251 SDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG----SYS 325 (421)
Q Consensus 251 ~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~----s~d 325 (421)
..+.++ ++.++++... +..+||.+...+.....+..+... .+..++++|+++.|+.. ...
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~--------------~v~~~~~s~d~~~l~~~~ss~~~P 431 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIG--------------SASGLSGRPGDRHAYLSFSSFTQP 431 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSC--------------EEEEEECCBTCSCEEEEEEETTEE
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCe--------------EEEEeecCCCCCEEEEEEcCCCCC
Confidence 677777 5556666543 665555443225544444432111 12578899998766522 235
Q ss_pred CeEEEEecCCC
Q 014644 326 NLLRIFSHGVG 336 (421)
Q Consensus 326 g~i~iwd~~~~ 336 (421)
++|++||+.++
T Consensus 432 ~~i~~~d~~tg 442 (741)
T 1yr2_A 432 ATVLALDPATA 442 (741)
T ss_dssp EEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 78999999876
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.36 E-value=8.9e-10 Score=95.40 Aligned_cols=186 Identities=11% Similarity=0.035 Sum_probs=131.8
Q ss_pred ccceeEEeecccceeeeeeeecCCCC-cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHD-FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
+..+.+||.+++ +.+..+ ..+. ..+++++++|+|++|+ +.++.|..||.. +. .+..+. .+....+.
T Consensus 14 ~~~v~~~d~~tG---~~~w~~-~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~-G~-~~W~~~------~~~~~~~~ 80 (276)
T 3no2_A 14 WNKIAIINKDTK---EIVWEY-PLEKGWECNSVAATKAGEILF-SYSKGAKMITRD-GR-ELWNIA------APAGCEMQ 80 (276)
T ss_dssp CSEEEEEETTTT---EEEEEE-ECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTT-SC-EEEEEE------CCTTCEEE
T ss_pred CCEEEEEECCCC---eEEEEe-CCCccCCCcCeEECCCCCEEE-eCCCCEEEECCC-CC-EEEEEc------CCCCcccc
Confidence 457888998777 777777 4444 5789999999999998 546679999984 44 443332 12234678
Q ss_pred EEEEecCCCCeEEEEEc-CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-Ce
Q 014644 192 SAEFHPIYCNLLAYSSS-RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MN 269 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 269 (421)
++.+.|+| +.+++.+. ++.|..+|. +++.. ..+.. ... ...+......+++.++|+++++... +.
T Consensus 81 ~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l----~~~~~---~~~----~~~~~~~~~~v~~~~~G~~lv~~~~~~~ 147 (276)
T 3no2_A 81 TARILPDG-NALVAWCGHPSTILEVNM-KGEVL----SKTEF---ETG----IERPHAQFRQINKNKKGNYLVPLFATSE 147 (276)
T ss_dssp EEEECTTS-CEEEEEESTTEEEEEECT-TSCEE----EEEEE---CCS----CSSGGGSCSCCEECTTSCEEEEETTTTE
T ss_pred ccEECCCC-CEEEEecCCCCEEEEEeC-CCCEE----EEEec---cCC----CCcccccccCceECCCCCEEEEecCCCE
Confidence 89999999 88888877 778888885 44432 11111 000 0111234556788999999998876 99
Q ss_pred EEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEE
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~ 343 (421)
|..||.. ++.+..+.....+ .++...++|+++++++.++.|..+|..++ +..-.+
T Consensus 148 v~~~d~~--G~~~w~~~~~~~~----------------~~~~~~~~g~~~v~~~~~~~v~~~d~~tG-~~~w~~ 202 (276)
T 3no2_A 148 VREIAPN--GQLLNSVKLSGTP----------------FSSAFLDNGDCLVACGDAHCFVQLNLESN-RIVRRV 202 (276)
T ss_dssp EEEECTT--SCEEEEEECSSCC----------------CEEEECTTSCEEEECBTTSEEEEECTTTC-CEEEEE
T ss_pred EEEECCC--CCEEEEEECCCCc----------------cceeEcCCCCEEEEeCCCCeEEEEeCcCC-cEEEEe
Confidence 9999985 8888888765332 47788899999999998899999999887 443333
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.34 E-value=3.3e-09 Score=92.88 Aligned_cols=236 Identities=6% Similarity=-0.041 Sum_probs=151.4
Q ss_pred CCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEE
Q 014644 135 HAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 213 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~ 213 (421)
..+...+.++++.++|+++++. .++.|.+||.. . ... .+. .......+.++++++++ .++++...++.|.
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~-~~~-~~~-----~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G-KIT-EYP-----LPTPDAKVMCLTISSDG-EVWFTENAANKIG 81 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C-CEE-EEE-----CSSTTCCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C-CeE-Eec-----CCcccCceeeEEECCCC-CEEEeCCCCCeEE
Confidence 4455689999999999988887 68999999987 3 222 221 12234678999999998 7777766688999
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcc
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
.||.. ++. ..+.. ......+..++++++|+++++... +.|..||. . ++.. .+.......
T Consensus 82 ~~~~~-g~~-----~~~~~-----------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~-g~~~-~~~~~~~~~ 141 (299)
T 2z2n_A 82 RITKK-GII-----KEYTL-----------PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D-GKIR-EYELPNKGS 141 (299)
T ss_dssp EECTT-SCE-----EEEEC-----------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEE-EEECSSTTC
T ss_pred EECCC-CcE-----EEEeC-----------CCcCCCceeeEECCCCCEEEEecCCceEEEECC-C-CCEE-EecCCCCCC
Confidence 99976 321 11111 001346789999999988887755 88999998 3 4432 222111100
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeee
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRG 372 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 372 (421)
.+..++++++|++.++...++.|..||. ++......+.........+++.++ +. .+++.
T Consensus 142 -------------~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~--g~-----l~v~~ 200 (299)
T 2z2n_A 142 -------------YPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND--DA-----LWFVE 200 (299)
T ss_dssp -------------CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT--SS-----EEEEE
T ss_pred -------------CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC--CC-----EEEEc
Confidence 1268999999988777777889999998 542222223333344556666665 33 44444
Q ss_pred cccCc-ccCCCCCccccc--cccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 373 LYRQA-HENSSSGHHELS--YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 373 ~~d~~-~iw~~~~~~~~~--~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
..++. ..|+..+..... ......+..+++.|+|++.++.. .++|..|+
T Consensus 201 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 201 IIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred cCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 44444 555333322221 12345788999999999777663 67788886
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=3.7e-09 Score=100.68 Aligned_cols=263 Identities=10% Similarity=0.008 Sum_probs=156.7
Q ss_pred ccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCC-CCceeeeeeecCCCCCCccCCCe
Q 014644 113 NMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLE-ISDQCFNIVDMKPSNMDDLTEVI 190 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~-~~~~~~~~~~~~~~~~~~~~~~v 190 (421)
...+.++|..+. +.+..+ . ....+..+.|+|||++++++ .|+.|.+||+. ...+.+..+ .. ....
T Consensus 176 ~~~V~viD~~t~---~v~~~i-~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i-------~~-G~~P 242 (567)
T 1qks_A 176 AGQIALIDGSTY---EIKTVL-D-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-------KI-GSEA 242 (567)
T ss_dssp TTEEEEEETTTC---CEEEEE-E-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE-------EC-CSEE
T ss_pred CCeEEEEECCCC---eEEEEE-e-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEE-------ec-CCCC
Confidence 347888888876 666665 2 23356789999999999988 89999999994 233444443 11 2235
Q ss_pred eEEEEe----cCCCCeEEEEE-cCCeEEEEECCcccccccchhhhccccccCCCccccccc-ccceeEEEEcCCCCEEEE
Q 014644 191 TSAEFH----PIYCNLLAYSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI-IASISDIKFANDGQHLLS 264 (421)
Q Consensus 191 ~~~~~~----p~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~ 264 (421)
..++|+ |+| +++++++ .+++|.++|..+.+.. +.+........ ....| ...+..+..++++..++.
T Consensus 243 ~~ia~s~~~~pDG-k~l~v~n~~~~~v~ViD~~t~~~~----~~i~~~~~~~~---~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 243 RSIETSKMEGWED-KYAIAGAYWPPQYVIMDGETLEPK----KIQSTRGMTYD---EQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEEEECCSTTCTT-TEEEEEEEETTEEEEEETTTCCEE----EEEECCEECTT---TCCEESCCCEEEEEECSSSSEEEE
T ss_pred ceeEEccccCCCC-CEEEEEEccCCeEEEEECCCCcEE----EEEeccccccc---cccccCCCceEEEEEcCCCCEEEE
Confidence 789999 699 6666555 6699999998876543 22221000000 00001 125778889998776554
Q ss_pred e-cC-CeEEEEECCCCCcce--eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCCCCc
Q 014644 265 R-DY-MNLKLWDIRMDSTPV--ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVGSAG 339 (421)
Q Consensus 265 ~-~~-~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~ 339 (421)
. .+ |.|.++|... ...+ ..+...... .++.|+|+|++++++. .++.|.++|+.++ ..
T Consensus 315 ~~~~~g~v~~vd~~~-~~~~~v~~i~~~~~~----------------~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-kl 376 (567)
T 1qks_A 315 NVKETGKILLVDYTD-LNNLKTTEISAERFL----------------HDGGLDGSHRYFITAANARNKLVVIDTKEG-KL 376 (567)
T ss_dssp EETTTTEEEEEETTC-SSEEEEEEEECCSSE----------------EEEEECTTSCEEEEEEGGGTEEEEEETTTT-EE
T ss_pred EecCCCeEEEEecCC-Cccceeeeeeccccc----------------cCceECCCCCEEEEEeCCCCeEEEEECCCC-cE
Confidence 4 45 9999999875 3222 222222211 5789999999987665 5789999999987 44
Q ss_pred eeEEec-CC--CCccceee-ecCCcccccccceeeeec-ccCc-ccCCCCC---------ccccccccccCeEEEEEccC
Q 014644 340 GITVEA-GK--NENRKPIL-QAAPRARRSSLSNLTRGL-YRQA-HENSSSG---------HHELSYNLSSKLLHLAWHPT 404 (421)
Q Consensus 340 ~~~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~l~~g~-~d~~-~iw~~~~---------~~~~~~~~~~~v~~~~~spd 404 (421)
...+.. .. .+.+...| .|+ +. ..++++. .++. .+++... ...........-..+..||+
T Consensus 377 ~~~i~vgg~~Phpg~g~~~~~p~--~g----~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~ 450 (567)
T 1qks_A 377 VAIEDTGGQTPHPGRGANFVHPT--FG----PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN 450 (567)
T ss_dssp EEEEECSSSSBCCTTCEEEEETT--TE----EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred EEEEeccCcCCCCccceeeECCC--CC----cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCC
Confidence 444433 21 12233333 443 11 1344442 3344 5552211 11111111122235788999
Q ss_pred CCeEEEec--------CCceEEEe
Q 014644 405 TNLIACAN--------GNSLFFHY 420 (421)
Q Consensus 405 ~~~la~~~--------~~~~~i~~ 420 (421)
++.|.+.. .+.+.+|+
T Consensus 451 ~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 451 SQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp CSEEEEECTTCSSHHHHTCEEEEE
T ss_pred CCeEEEecCCCCCcccCceEEEEE
Confidence 99988866 24778776
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.28 E-value=3.1e-09 Score=93.28 Aligned_cols=230 Identities=10% Similarity=0.047 Sum_probs=138.0
Q ss_pred EEEEEEEEcCC-CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccccc
Q 014644 36 INRVRWCAAPN-GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 114 (421)
Q Consensus 36 V~~v~~~~~~~-~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 114 (421)
-.+..| +++ +.++++...++.|..||..+++..... ....+. ++.+.+++.++... ..
T Consensus 15 ~Egp~w--~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~~~------------~i~~~~dG~l~v~~----~~ 73 (297)
T 3g4e_A 15 GESPVW--EEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT---MDAPVS------------SVALRQSGGYVATI----GT 73 (297)
T ss_dssp EEEEEE--ETTTTEEEEEETTTTEEEEEETTTCCEEEEE---CSSCEE------------EEEEBTTSSEEEEE----TT
T ss_pred ccCCeE--ECCCCEEEEEECCCCEEEEEECCCCcEEEEe---CCCceE------------EEEECCCCCEEEEE----CC
Confidence 357788 464 567777778899999999887643332 223233 33333344333221 22
Q ss_pred ceeEEeecccceeeeeeeecC-CCCcceEEEeecCCCCEEEEE-cC---------CcEEEEeCCCCceeeeeeecCCCCC
Q 014644 115 ATKIANVGNSVHARCQKVYPH-AHDFNINSISNNSDCETFVSA-DD---------LRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~-~d---------~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
.+.+++.++... +.+..... .....++.+++.|+|+++++. .. ..-.||.+...+......
T Consensus 74 ~l~~~d~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~------- 145 (297)
T 3g4e_A 74 KFCALNWKEQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF------- 145 (297)
T ss_dssp EEEEEETTTTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-------
T ss_pred eEEEEECCCCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-------
Confidence 355566554311 11111101 123468899999999988875 32 334666665333332221
Q ss_pred CccCCCeeEEEEecCCCCeE-EEEEcCCeEEEEECC--cccccccchhhhccccccCCCcccccccccceeEEEEcCCCC
Q 014644 184 DDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVDMR--QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQ 260 (421)
Q Consensus 184 ~~~~~~v~~~~~~p~~~~~l-~s~~~d~~v~iwd~~--~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~ 260 (421)
........++|+|++ +.| ++.+.++.|.+||+. ++..... +.+.. +......+..++++++|+
T Consensus 146 -~~~~~pngi~~spdg-~~lyv~~~~~~~i~~~~~d~~~G~~~~~--~~~~~----------~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 146 -DQVDISNGLDWSLDH-KIFYYIDSLSYSVDAFDYDLQTGQISNR--RSVYK----------LEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp -EEESBEEEEEECTTS-CEEEEEEGGGTEEEEEEECTTTCCEEEE--EEEEE----------CCGGGCEEEEEEEBTTSC
T ss_pred -eccccccceEEcCCC-CEEEEecCCCCcEEEEeccCCCCcccCc--EEEEE----------CCCCCCCCCeeEECCCCC
Confidence 233456789999999 655 455567899999874 4332110 11111 111234678999999998
Q ss_pred EEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEc-CCCCEEEEeeC
Q 014644 261 HLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS-GDGLHFATGSY 324 (421)
Q Consensus 261 ~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~~~~l~~~s~ 324 (421)
+.++... +.|..||..+ ++.+..+..+...+ ++++|. |+++.|+.++.
T Consensus 212 lwva~~~~~~v~~~d~~t-G~~~~~i~~p~~~~---------------t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVT-GKRLQTVKLPVDKT---------------TSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEETTTEEEEECTTT-CCEEEEEECSSSBE---------------EEEEEESGGGCEEEEEEB
T ss_pred EEEEEcCCCEEEEEcCCC-ceEEEEEECCCCCc---------------eEEEEeCCCCCEEEEEcC
Confidence 7777655 8899999976 78877777664332 789998 88887766554
No 203
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=1.6e-10 Score=103.84 Aligned_cols=189 Identities=8% Similarity=0.034 Sum_probs=122.7
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccccc
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 114 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 114 (421)
.++.+++ ++...++++|+.+ .+++|++++..- .+.. ... .
T Consensus 39 ~~nlLai--s~~~gll~a~~~~-~l~v~~~~~l~~-~~~~--~~~------------~---------------------- 78 (388)
T 1xip_A 39 SLQNLDI--SNSKSLFVAASGS-KAVVGELQLLRD-HITS--DST------------P---------------------- 78 (388)
T ss_dssp CCBCEEE--ETTTTEEEEEETT-EEEEEEHHHHHH-HHHS--SSC------------C----------------------
T ss_pred cccEEEE--cCCCCEEEEeCCC-EEEEEEhhHhhh-hhcc--ccc------------c----------------------
Confidence 6899999 6888899999987 556699765320 0000 000 0
Q ss_pred ceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEE
Q 014644 115 ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAE 194 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 194 (421)
.+..... .+.. |+.++| |+.+|+++.++.|++||+....+.. .. ..|...+.++.
T Consensus 79 ------------~~~~~~~--~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~sl~~~~-~~-------~~~~~~v~~i~ 133 (388)
T 1xip_A 79 ------------LTFKWEK--EIPD-VIFVCF--HGDQVLVSTRNALYSLDLEELSEFR-TV-------TSFEKPVFQLK 133 (388)
T ss_dssp ------------CCCSEEE--ECTT-EEEEEE--ETTEEEEEESSEEEEEESSSTTCEE-EE-------EECSSCEEEEE
T ss_pred ------------ccceEEe--eCCC-eeEEEE--CCCEEEEEcCCcEEEEEchhhhccC-cc-------ceeecceeeEE
Confidence 0111111 3455 999999 9999999988999999998433222 22 34566788777
Q ss_pred EecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEE
Q 014644 195 FHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWD 274 (421)
Q Consensus 195 ~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d 274 (421)
+.+. .+++++.||.|.+||+.++... . . ...|++++|+|+| +.+...+|++++|+
T Consensus 134 ~~~p---~~av~~~dG~L~v~dl~~~~~~----~---~--------------~~~Vs~v~WSpkG-~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 134 NVNN---TLVILNSVNDLSALDLRTKSTK----Q---L--------------AQNVTSFDVTNSQ-LAVLLKDRSFQSFA 188 (388)
T ss_dssp ECSS---EEEEEETTSEEEEEETTTCCEE----E---E--------------EESEEEEEECSSE-EEEEETTSCEEEEE
T ss_pred ecCC---CEEEEECCCCEEEEEccCCccc----c---c--------------cCCceEEEEcCCc-eEEEEcCCcEEEEc
Confidence 6653 3888899999999999876532 1 1 4579999999999 44444559999998
Q ss_pred CCCCCcc--eeEEeeccCcccccccccC-CCcceeeeEEEEcCCCCEEEE
Q 014644 275 IRMDSTP--VATFKIHEHLRPKLCDLYN-NDSIFDKFECSVSGDGLHFAT 321 (421)
Q Consensus 275 ~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sp~~~~l~~ 321 (421)
... ++. ...+...... .+ .+.-+.|.+++|.++++++++
T Consensus 189 ~~~-~~~~~k~~I~~Pp~~-------~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 189 WRN-GEMEKQFEFSLPSEL-------EELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EET-TEEEEEEEECCCHHH-------HTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCC-ccccccceecCCccc-------ccccCCCeeEEEEEEecCCeEEEE
Confidence 864 443 3344221100 00 000123479999999998876
No 204
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.25 E-value=7.8e-09 Score=91.98 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=95.1
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc------CCeE
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS------RGFV 212 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~------d~~v 212 (421)
..+.+++++++|+++++..+ .|.+||.. +++........ .......+.+++++|+| +++++... .+.|
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~-gl~~~d~~-~g~~~~~~~~~---~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDD-GLFLRDTA-TGVLTLHAELE---SDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SCEEEEEEEETTEEEEEETT-EEEEEETT-TCCEEEEECSS---TTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEE
T ss_pred CcceEEEEeCCCeEEEEECC-CEEEEECC-CCcEEEEeeCC---CCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEE
Confidence 35888999999988887644 49999987 34433222110 00112458899999999 76655432 2455
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECC-CCC-cce--eEEe
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIR-MDS-TPV--ATFK 286 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~-~~~-~~~--~~~~ 286 (421)
..++ +++.. ..... ......++|+|||+.++.+ +. +.|.+||+. ..+ ... ..+.
T Consensus 164 ~~~~--~g~~~----~~~~~--------------~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~ 223 (326)
T 2ghs_A 164 YHVA--KGKVT----KLFAD--------------ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI 223 (326)
T ss_dssp EEEE--TTEEE----EEEEE--------------ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE
T ss_pred EEEe--CCcEE----EeeCC--------------CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE
Confidence 5555 33321 11111 2346789999999877654 44 899999985 114 221 1121
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
...... . ....++++++|.+.++...++.|.+|+..
T Consensus 224 ~~~~~~---------~---~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 224 DSTGIK---------G---GMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp ECTTSS---------S---EEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred ECCCCC---------C---CCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 110000 0 11578999999887777677899999873
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=9.1e-10 Score=108.47 Aligned_cols=237 Identities=11% Similarity=0.031 Sum_probs=143.8
Q ss_pred CCCCcceEEEeecCCCCEEEEE------cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc
Q 014644 135 HAHDFNINSISNNSDCETFVSA------DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS 208 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s~------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 208 (421)
.+|...+..++|||||++||.+ +...|++||+.+ ++.+... +. .....+++|+ |+ +.|+.++.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~t-g~~~~~~------~~--~~k~~~~~Ws-Dg-~~l~y~~~ 193 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVES-KQPLETP------LK--DVKFSGISWL-GN-EGFFYSSY 193 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTT-CSEEEEE------EE--EEESCCCEEE-TT-TEEEEEES
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCC-CCCCccc------cC--CceeccEEEe-CC-CEEEEEEe
Confidence 4566678899999999999954 235799999984 4433211 01 1113578899 99 88888877
Q ss_pred CC-------------eEEEEECCcccccccchhhhccccccCCCcccccc-cccceeEEEEcCCCCEEEEe-c---C-Ce
Q 014644 209 RG-------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTE-IIASISDIKFANDGQHLLSR-D---Y-MN 269 (421)
Q Consensus 209 d~-------------~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~---~-~~ 269 (421)
+. .|++|++.++...+. .++.. .. +......+.|+|||++|+.. . . ..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~--~v~~~-----------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 260 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDR--LVFGA-----------IPAQHHRYVGATVTEDDRFLLISAANSTSGNR 260 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCE--EEESC-----------SGGGCCSEEEEEECTTSCEEEEEEESSSSCCE
T ss_pred cCcccccccccCCCcEEEEEECCCCcccce--EEEec-----------CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcE
Confidence 64 389999877543211 12222 11 23346789999999988643 1 2 58
Q ss_pred EEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CC---CeEEEEecCCCCC-ceeEEe
Q 014644 270 LKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YS---NLLRIFSHGVGSA-GGITVE 344 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~d---g~i~iwd~~~~~~-~~~~~~ 344 (421)
|+++|+.........+..+.... ... ++++|..|+..+ .+ +.|..+++.++.. ....+.
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~---------------~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDAD---------------VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSC---------------EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EEEEECCCCCCceEEEeCCCCce---------------EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe
Confidence 99999976333445555544332 233 666666655444 33 6799999987633 134566
Q ss_pred cCCCCccceeeecCCcccccccceeee-ecccCc-ccC--CCCCcccccc--ccccCeEEEEEccCCCeEEEec-C----
Q 014644 345 AGKNENRKPILQAAPRARRSSLSNLTR-GLYRQA-HEN--SSSGHHELSY--NLSSKLLHLAWHPTTNLIACAN-G---- 413 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-g~~d~~-~iw--~~~~~~~~~~--~~~~~v~~~~~spd~~~la~~~-~---- 413 (421)
.|...+. .+++. +. .|+. ...++. +|+ +..+.....+ .....+..++++|+++.|+... +
T Consensus 325 ~~~~~~~--~~s~~--g~-----~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP 395 (693)
T 3iuj_A 325 PERQQVL--TVHSG--SG-----YLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQP 395 (693)
T ss_dssp CCCSSCE--EEEEE--TT-----EEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSC
T ss_pred cCCCCEE--EEEEE--CC-----EEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCC
Confidence 6665554 67776 22 4444 445554 444 4332222222 2344577888899988877554 2
Q ss_pred CceEEEe
Q 014644 414 NSLFFHY 420 (421)
Q Consensus 414 ~~~~i~~ 420 (421)
..++.|+
T Consensus 396 ~~l~~~d 402 (693)
T 3iuj_A 396 PTLYRFE 402 (693)
T ss_dssp CEEEEEC
T ss_pred CEEEEEE
Confidence 5677765
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=4.7e-09 Score=92.11 Aligned_cols=228 Identities=10% Similarity=-0.021 Sum_probs=134.2
Q ss_pred CCCcceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEE
Q 014644 136 AHDFNINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 213 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~ 213 (421)
.+..-..+..|++++ .++++. .++.|..||.. ++.. ..+ .....+.+++++|++ +++++ . ++.|.
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~-~~~~-~~~--------~~~~~~~~i~~~~dG-~l~v~-~-~~~l~ 76 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSF-TKQV-QRV--------TMDAPVSSVALRQSG-GYVAT-I-GTKFC 76 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETT-TCCE-EEE--------ECSSCEEEEEEBTTS-SEEEE-E-TTEEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECC-CCcE-EEE--------eCCCceEEEEECCCC-CEEEE-E-CCeEE
Confidence 344456788999964 455556 78999999998 3332 222 133578999999999 75554 3 66899
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC----------CeEEEEECCCCCccee
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY----------MNLKLWDIRMDSTPVA 283 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------~~i~i~d~~~~~~~~~ 283 (421)
+||..+++.. ..... . . ......++.++++|+|+++++... ..-.||.+...++...
T Consensus 77 ~~d~~~g~~~----~~~~~-~--~------~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~ 143 (297)
T 3g4e_A 77 ALNWKEQSAV----VLATV-D--N------DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK 143 (297)
T ss_dssp EEETTTTEEE----EEEEC-C--T------TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE
T ss_pred EEECCCCcEE----EEEec-C--C------CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE
Confidence 9998876532 11111 0 0 001245789999999997775421 2234555543243332
Q ss_pred EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEE-EeeCCCeEEEEecC--CCCCc----eeEEecCCCCccceeee
Q 014644 284 TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYSNLLRIFSHG--VGSAG----GITVEAGKNENRKPILQ 356 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~dg~i~iwd~~--~~~~~----~~~~~~~~~~~~~~~~~ 356 (421)
.......+ ..++|+|+++.|+ +.+.++.|.+|++. ++... ...+..+......+++.
T Consensus 144 ~~~~~~~p----------------ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 144 YFDQVDIS----------------NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp EEEEESBE----------------EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred Eeeccccc----------------cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 22221111 6899999998765 45567899999984 33211 11112222334556665
Q ss_pred cCCcccccccceeeeecccCc-ccCCC--CCccccccccccCeEEEEEc-cCCCeEEEec
Q 014644 357 AAPRARRSSLSNLTRGLYRQA-HENSS--SGHHELSYNLSSKLLHLAWH-PTTNLIACAN 412 (421)
Q Consensus 357 ~~~~~~~~~~~~l~~g~~d~~-~iw~~--~~~~~~~~~~~~~v~~~~~s-pd~~~la~~~ 412 (421)
++ |+ +.++....+. ..|+. ++.+.........+++++|. ||++.|.+++
T Consensus 208 ~~--G~-----lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 208 AE--GK-----LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TT--SC-----EEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CC--CC-----EEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 55 33 4444444444 55643 34444443445679999998 8988776554
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=1.2e-08 Score=91.37 Aligned_cols=238 Identities=12% Similarity=0.056 Sum_probs=130.8
Q ss_pred EeecCCCCEEEEE-c----------CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc--CC
Q 014644 144 ISNNSDCETFVSA-D----------DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RG 210 (421)
Q Consensus 144 l~~~~~~~~l~s~-~----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d~ 210 (421)
++++|||++++.+ . ++.|.+||.. ..+....+.+....-.........+.|+||| ++++.+.. ++
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~-t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~ 160 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV-TLLPTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAP 160 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCCEEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSC
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECC-CCeEEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCC
Confidence 8999999988765 2 5789999998 4555555532110000012245679999999 88777763 68
Q ss_pred eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE-ecCCeEEEEECCCCCcceeEEeecc
Q 014644 211 FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS-RDYMNLKLWDIRMDSTPVATFKIHE 289 (421)
Q Consensus 211 ~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~i~d~~~~~~~~~~~~~~~ 289 (421)
.|.++|+.+++.. ..+.. .+ . ...+....+.+++ +.+|.+.+.++...++.........
T Consensus 161 ~VsVID~~t~~vv----~tI~v--------------~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~ 220 (386)
T 3sjl_D 161 AVGVVDLEGKAFK----RMLDV--------------PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF 220 (386)
T ss_dssp EEEEEETTTTEEE----EEEEC--------------CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCC
T ss_pred eEEEEECCCCcEE----EEEEC--------------CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeeccee
Confidence 9999999997654 22222 11 1 1122222333333 3447777777764344422111000
Q ss_pred CcccccccccCCCcceeeeEEEEc-CCCCEEEEeeCCCeEEEEecCCCCCc-eeEEe--------c--CCCCccceeeec
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVS-GDGLHFATGSYSNLLRIFSHGVGSAG-GITVE--------A--GKNENRKPILQA 357 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~s-p~~~~l~~~s~dg~i~iwd~~~~~~~-~~~~~--------~--~~~~~~~~~~~~ 357 (421)
. .....++ ....|. ++|++++ .+.+|.|++.|+...... ...+. . .......+++++
T Consensus 221 ~--------~~~~~~~--~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~ 289 (386)
T 3sjl_D 221 H--------PEDEFLI--NHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 289 (386)
T ss_dssp S--------CTTSCBC--SCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET
T ss_pred c--------ccccccc--ccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC
Confidence 0 0111121 234664 6786554 666899999998765321 11111 0 112334456655
Q ss_pred CCcccccccceeeeecc--------cCc-ccC---CCCCccccccccccCeEEEEEccCCC-eEEEec--CCceEEEeC
Q 014644 358 APRARRSSLSNLTRGLY--------RQA-HEN---SSSGHHELSYNLSSKLLHLAWHPTTN-LIACAN--GNSLFFHYA 421 (421)
Q Consensus 358 ~~~~~~~~~~~l~~g~~--------d~~-~iw---~~~~~~~~~~~~~~~v~~~~~spd~~-~la~~~--~~~~~i~~~ 421 (421)
+ +. .|..... +.. ++| .........+.....+..++++||++ +|+++. ++.+.++++
T Consensus 290 ~--~~-----~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 290 A--LD-----RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp T--TT-----EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred C--CC-----eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 5 22 3333221 122 677 22233333334445788999999996 666644 677988874
No 208
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=9.6e-09 Score=92.10 Aligned_cols=180 Identities=7% Similarity=0.050 Sum_probs=108.7
Q ss_pred CCCcceEEEeecCCCCEEEEE-c-----CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE--
Q 014644 136 AHDFNINSISNNSDCETFVSA-D-----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-- 207 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~~l~s~-~-----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-- 207 (421)
+|-..+..+++.++++++++- . +..|.+||+. +++..+.+.+... ...+...+..++++|++...+++-.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~-tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL-NNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT-TTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC-CCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCcc
Confidence 456689999999999877765 4 6899999998 5565555543211 1123345789999987524445544
Q ss_pred -cCCeEEEEECCcccccccchhhhccccc-cCCC-cccccc--------------cccceeEEEEcCCCCEEEEecC--C
Q 014644 208 -SRGFVRLVDMRQSALCDHSARILRDAAE-SHGS-KSFFTE--------------IIASISDIKFANDGQHLLSRDY--M 268 (421)
Q Consensus 208 -~d~~v~iwd~~~~~~~~~~~~~~~~h~~-~~~~-~~~~~~--------------~~~~v~~~~~s~~~~~l~~~~~--~ 268 (421)
.++.|.+||+.+++.. +.+..|.. .+.. .....+ ....+..++|+|||+.|+.+.. .
T Consensus 142 ~~~~~i~v~d~~~g~~~----r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~ 217 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAA----RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST 217 (343)
T ss_dssp GGGCEEEEEETTTCCEE----EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS
T ss_pred CCCCeEEEEECCCCCEE----EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC
Confidence 6789999999876543 22211100 0000 000000 0124688999999998887644 4
Q ss_pred eEEEEECCC--CCc-----cee--EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 269 NLKLWDIRM--DST-----PVA--TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 269 ~i~i~d~~~--~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.+..++... .+. ... ...++.... ..++++++|.+.++...++.|.+||..++
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p---------------dgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERYSEKPIC---------------DGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC---------------SCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEecccCCCC---------------ceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 555555321 010 000 111111111 47999999999998888999999998444
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=2.3e-08 Score=91.75 Aligned_cols=270 Identities=10% Similarity=0.087 Sum_probs=148.2
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccccc
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENM 114 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 114 (421)
....|+| +++++++++...++.|++||.+++.+..+....... . ++ +.++...+.........
T Consensus 132 ~P~~la~--d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~--~-ia------------~~~~g~~l~~~d~~~~~ 194 (409)
T 3hrp_A 132 YMWGIAA--VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG--K-PA------------VTKDKQRVYSIGWEGTH 194 (409)
T ss_dssp CEEEEEE--CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC--B-CE------------ECTTSSEEEEEBSSTTC
T ss_pred CceEEEE--eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC--c-ee------------EecCCCcEEEEecCCCc
Confidence 5678999 688888888888899999999988765554321111 1 22 23333333322221111
Q ss_pred ceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCe-e-
Q 014644 115 ATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVI-T- 191 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v-~- 191 (421)
.+..++.........+..+.......+.+++++|++..|..+ .++.|+.||... ... ..+... ...++...- .
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~-~~~-~~~~~~--~~~g~~~~~P~~ 270 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT-QEV-TLIKQL--ELSGSLGTNPGP 270 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT-CCE-EEEEEC--CCCSCCCCSSCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC-CCE-EEEecc--cccCCCCCCccc
Confidence 344444443321112212212245667899999954455557 888999999983 322 221000 011222222 3
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCc--ccccccccceeEEEEcCCCCEEEEec-C-
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSK--SFFTEIIASISDIKFANDGQHLLSRD-Y- 267 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~-~- 267 (421)
.++|+|++..++++-..++.|+.|+..... ..+..+....... ......-.....++++|+|+++++-. .
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~------~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGEC------EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCE------EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCCE------EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC
Confidence 999999642666666678899999876431 1111100000000 00001123478999999999777766 6
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
+.|+.|++.. +. +..+.++..........-....+.....++++|+|.++++-..++.|+.+++
T Consensus 345 ~~I~~~~~~~-G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 345 YCLRKLDILD-GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CEEEEEETTT-TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CEEEEEECCC-CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 8999999754 54 4444443110000000000000112368999999888888888889988765
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=2.2e-10 Score=102.93 Aligned_cols=150 Identities=13% Similarity=0.156 Sum_probs=100.0
Q ss_pred ceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeee--eeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 140 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFN--IVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
.++.|++++...++++| .+ .+.+|+++.-..... ..+..+.....+.. |+.++| ++ ..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG-DQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET-TEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEE
Confidence 68999999999999998 55 677798752110000 00000000123556 999999 77 888888 889999999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cCCeEEEEECCCCCcceeEEeeccCccccc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DYMNLKLWDIRMDSTPVATFKIHEHLRPKL 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 295 (421)
+++.... ..... +...+..+.+.+.. ++++ ++|.|.+||+.. +.... . ...
T Consensus 113 v~sl~~~----~~~~~-------------~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~-~~~~~-~---~~~---- 164 (388)
T 1xip_A 113 LEELSEF----RTVTS-------------FEKPVFQLKNVNNT--LVILNSVNDLSALDLRT-KSTKQ-L---AQN---- 164 (388)
T ss_dssp SSSTTCE----EEEEE-------------CSSCEEEEEECSSE--EEEEETTSEEEEEETTT-CCEEE-E---EES----
T ss_pred chhhhcc----Cccce-------------eecceeeEEecCCC--EEEEECCCCEEEEEccC-Ccccc-c---cCC----
Confidence 9875422 11112 24457777776543 5554 559999999985 44432 1 122
Q ss_pred ccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 296 CDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
|.+++|+|+| ++.|..||.+++|+....
T Consensus 165 -----------Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 165 -----------VTSFDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp -----------EEEEEECSSE--EEEEETTSCEEEEEEETT
T ss_pred -----------ceEEEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 2799999999 678999999999988765
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=6.2e-08 Score=87.61 Aligned_cols=236 Identities=9% Similarity=-0.025 Sum_probs=130.9
Q ss_pred EEeecCCCCEEEEE-c----------CCcEEEEeCCCCceeeeeeecC-CCCCCccCCCeeEEEEecCCCCeEEEEEc--
Q 014644 143 SISNNSDCETFVSA-D----------DLRINLWNLEISDQCFNIVDMK-PSNMDDLTEVITSAEFHPIYCNLLAYSSS-- 208 (421)
Q Consensus 143 ~l~~~~~~~~l~s~-~----------d~~i~lwd~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-- 208 (421)
.++++|||++|+.+ . ++.|.+||.. ..+....+.+. ..... +......+.|+|+| ++|+.+..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~-t~~~~~~i~~~~~~~~~-~g~~p~~~~~spDG-~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV-TFLPIADIELPDAPRFD-VGPYSWMNANTPNN-ADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC-CCcEEEEEECCCccccc-cCCCccceEECCCC-CEEEEEecCC
Confidence 78999999999887 3 5789999998 44455544321 10100 11334689999999 88887764
Q ss_pred CCeEEEEECCcccccccchhh-hccccccCCCcccccccccceeEEEEcCCCCEE-EE-ecCCeEEEEECCCCCcceeEE
Q 014644 209 RGFVRLVDMRQSALCDHSARI-LRDAAESHGSKSFFTEIIASISDIKFANDGQHL-LS-RDYMNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 209 d~~v~iwd~~~~~~~~~~~~~-~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~-~~~~~i~i~d~~~~~~~~~~~ 285 (421)
++.|.++| .+++.. .. +.. . .++.+.|++... ++ +.+|.+.++|. + ++.+...
T Consensus 147 ~~~v~viD-~t~~~~----~~~i~~--------------~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~~~~~~ 202 (373)
T 2mad_H 147 GPAVGLVV-QGGSSD----DQLLSS--------------P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-A-GGAAGAG 202 (373)
T ss_pred CCeEEEEE-CCCCEE----eEEcCC--------------C---ceEEEEeCCCceEEEEcCCCCEEEEEC-C-CcEEEEE
Confidence 57899999 887643 22 222 1 124455665433 33 34488999999 5 5554322
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCc-eeEEecCC----------CCcccee
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAG-GITVEAGK----------NENRKPI 354 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~-~~~~~~~~----------~~~~~~~ 354 (421)
....... ..+.++ ....+.+++..++..+.++.+.+.|+...... ...+.... .....+.
T Consensus 203 ~~~~~~~-------~~~p~~--~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 203 LVGAMLT-------AAQNLL--TQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred ecccccc-------CCccee--ecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 1100000 000110 23456676655555557889999998754221 11221111 1112244
Q ss_pred eecCCcccccccceeeeeccc--------Cc-ccC--CC-CCccccccccccCeEEEEEccCCC-eEEEec--CCceEEE
Q 014644 355 LQAAPRARRSSLSNLTRGLYR--------QA-HEN--SS-SGHHELSYNLSSKLLHLAWHPTTN-LIACAN--GNSLFFH 419 (421)
Q Consensus 355 ~~~~~~~~~~~~~~l~~g~~d--------~~-~iw--~~-~~~~~~~~~~~~~v~~~~~spd~~-~la~~~--~~~~~i~ 419 (421)
++++ +. .+.....+ +. .+| +. .......+........++|+|||+ .|+++. ++.+.+|
T Consensus 274 ~s~d--~~-----~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~Vi 346 (373)
T 2mad_H 274 YLKS--SD-----GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIY 346 (373)
T ss_pred ECCC--CC-----EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEE
Confidence 5554 22 33332211 12 455 22 222223334445688999999999 677665 6779988
Q ss_pred eC
Q 014644 420 YA 421 (421)
Q Consensus 420 ~~ 421 (421)
++
T Consensus 347 D~ 348 (373)
T 2mad_H 347 DA 348 (373)
T ss_pred EC
Confidence 74
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.20 E-value=4e-09 Score=103.90 Aligned_cols=255 Identities=12% Similarity=0.056 Sum_probs=141.7
Q ss_pred cccccEEEEEEEEcCCCCeEEEE-----eCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceee
Q 014644 31 EIEEKINRVRWCAAPNGSMFILS-----TNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 31 ~h~~~V~~v~~~~~~~~~~l~t~-----s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
+|...+..++| +||+++||-+ +.+.+|++||+.+++......... ....++|. ....+.-.......
T Consensus 126 ~~~~~l~~~~~--SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~--- 197 (693)
T 3iuj_A 126 DGTTALDQLSF--SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPD--- 197 (693)
T ss_dssp TSCCEEEEEEE--CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEE--CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcc---
Confidence 45557888899 8999998854 333589999999988433211100 01233444 33333222221110
Q ss_pred eeccc---ccccceeEEeecccce-eeeeeeecCC-CCcceEEEeecCCCCEEEEE-c----CCcEEEEeCCCCceeeee
Q 014644 106 YHLEW---TENMATKIANVGNSVH-ARCQKVYPHA-HDFNINSISNNSDCETFVSA-D----DLRINLWNLEISDQCFNI 175 (421)
Q Consensus 106 ~~g~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~-~----d~~i~lwd~~~~~~~~~~ 175 (421)
.+.. .....+.+|++.+... ..++... .. |...+..+.|+|||++|+.. . +..|+++|+.........
T Consensus 198 -~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 198 -GSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp --------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred -cccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 0000 0012567777765422 1222222 33 44557889999999988753 2 358999999744323333
Q ss_pred eecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC---CeEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 176 VDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR---GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
+ ..+....... |++++..+++....+ +.|..+|+.++... ..+.+.. +...+.
T Consensus 276 l-------~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~--~~~~l~~-------------~~~~~~- 331 (693)
T 3iuj_A 276 V-------QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA--HWRDLIP-------------ERQQVL- 331 (693)
T ss_dssp E-------ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCEEEEC-------------CCSSCE-
T ss_pred E-------eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--ccEEEec-------------CCCCEE-
Confidence 3 3344445554 677773444444443 67999998875421 0011222 123333
Q ss_pred EEEcCCCCEEEEec--C--CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCC---
Q 014644 253 IKFANDGQHLLSRD--Y--MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYS--- 325 (421)
Q Consensus 253 ~~~s~~~~~l~~~~--~--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~d--- 325 (421)
.|++++++|+... + ..|++||+. +.....+...... .+..+.++|++..|+....+
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~--g~~~~~l~~p~~~--------------~~~~~~~~~d~~~l~~~~ss~~t 394 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYE--GKRVREVALPGLG--------------SVSGFNGKHDDPALYFGFENYAQ 394 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTT--SCEEEEECCSSSS--------------EEEECCCCTTCSCEEEEEECSSS
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECC--CCeeEEeecCCCc--------------eEEeeecCCCCCEEEEEecCCCC
Confidence 8899999887653 2 378899986 3334444322211 11456777887766655444
Q ss_pred -CeEEEEecCCC
Q 014644 326 -NLLRIFSHGVG 336 (421)
Q Consensus 326 -g~i~iwd~~~~ 336 (421)
+.|+.||+.++
T Consensus 395 P~~l~~~d~~~g 406 (693)
T 3iuj_A 395 PPTLYRFEPKSG 406 (693)
T ss_dssp CCEEEEECTTTC
T ss_pred CCEEEEEECCCC
Confidence 78999998876
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.20 E-value=3.5e-08 Score=86.28 Aligned_cols=235 Identities=6% Similarity=-0.026 Sum_probs=148.2
Q ss_pred CCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEE
Q 014644 136 AHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRL 214 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~i 214 (421)
.....+.++++.++|+++++. .++.|.+||.. . +... +. +......+.++++.+++ .++++...++.|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~-~~~~-~~-----~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~ 87 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-G-RIKE-FE-----VPTPDAKVMCLIVSSLG-DIWFTENGANKIGK 87 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S-CEEE-EE-----CSSTTCCEEEEEECTTS-CEEEEETTTTEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-C-ceEE-EE-----CCCCCCcceeEEECCCC-CEEEEecCCCeEEE
Confidence 345678999999999988888 78999999987 3 2222 21 12334678999999998 77776666789999
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCccc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRP 293 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~ 293 (421)
+|.. ++.. .+.. ......+..+++.++|+++++... +.|..+|.. ++.. .+.......
T Consensus 88 ~d~~-g~~~-----~~~~-----------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~-~~~~~~~~~- 146 (300)
T 2qc5_A 88 LSKK-GGFT-----EYPL-----------PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIY-EYDLPNKGS- 146 (300)
T ss_dssp ECTT-SCEE-----EEEC-----------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEE-EEECSSTTC-
T ss_pred ECCC-CCeE-----EecC-----------CCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEE-EccCCCCCC-
Confidence 9977 4321 1111 001246789999999998887764 889999875 3332 222111100
Q ss_pred ccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeec
Q 014644 294 KLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGL 373 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 373 (421)
...+++++++|++.++...++.|..++. ++......+..+......+++.++ +. ..++..
T Consensus 147 ------------~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~--g~-----l~v~~~ 206 (300)
T 2qc5_A 147 ------------YPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGND--GA-----LWFVEI 206 (300)
T ss_dssp ------------CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT--SS-----EEEEET
T ss_pred ------------CceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCC--CC-----EEEEcc
Confidence 1268999999997666666789999998 442222222233344556666655 33 444443
Q ss_pred ccCc-ccCCCCCccccc--cccccCeEEEEEccCCCeEEEec-CCceEEEe
Q 014644 374 YRQA-HENSSSGHHELS--YNLSSKLLHLAWHPTTNLIACAN-GNSLFFHY 420 (421)
Q Consensus 374 ~d~~-~iw~~~~~~~~~--~~~~~~v~~~~~spd~~~la~~~-~~~~~i~~ 420 (421)
..+. ..++..+..... ......+..+++.++|++.++.. .++|..|+
T Consensus 207 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 207 MGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp TTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEEC
Confidence 3333 444333222211 12345688999999999776665 57788775
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.20 E-value=8.5e-09 Score=94.60 Aligned_cols=236 Identities=7% Similarity=-0.063 Sum_probs=139.9
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC--eEEEE
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG--FVRLV 215 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~--~v~iw 215 (421)
.....++|+++++++++. .++.|++||.. .+...... .. ..... ++|+|++ ..|+++..++ .|.++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~-~g~~~~~~-------~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~ 199 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVD-DNKVTTVH-------PG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVY 199 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETT-TTEEEEEE-------ET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECC-CCEEEEee-------cc-CCCCc-eeEecCC-CcEEEEecCCCceEEEE
Confidence 467899999999988877 78999999998 44444433 11 22234 8999999 8888887765 78888
Q ss_pred ECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccc
Q 014644 216 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPK 294 (421)
Q Consensus 216 d~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~ 294 (421)
+...+... ..+.. .. ......+.+++++|++..|..+.. +.|+.||... +. ...+........
T Consensus 200 d~~~~~~~----~~~g~--~~-------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~-~~-~~~~~~~~~~g~- 263 (409)
T 3hrp_A 200 MKASGWAP----TRIGQ--LG-------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT-QE-VTLIKQLELSGS- 263 (409)
T ss_dssp EGGGTTCE----EEEEE--CC-------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT-CC-EEEEEECCCCSC-
T ss_pred EcCCCcee----EEeee--cc-------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC-CC-EEEEecccccCC-
Confidence 87654321 11100 00 001345788999995444444544 8899999875 33 333311100000
Q ss_pred cccccCCCcceeee-EEEEcCC-CCEEEEeeCCCeEEEEecCCCCCceeEEecCC---------------CCccceeeec
Q 014644 295 LCDLYNNDSIFDKF-ECSVSGD-GLHFATGSYSNLLRIFSHGVGSAGGITVEAGK---------------NENRKPILQA 357 (421)
Q Consensus 295 ~~~~~~~~~~~~~~-~~~~sp~-~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 357 (421)
...... .++|+|+ +.++++-..++.|+.|+.... ...+.++. .....+++.+
T Consensus 264 --------~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 264 --------LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp --------CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred --------CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 000002 8999995 555566667889999987633 33333332 2345566766
Q ss_pred CCcccccccceeeeec-ccCc-ccCC-CCCcccccccc---------------ccCeEEEEEccCCCeEEEec-CCceEE
Q 014644 358 APRARRSSLSNLTRGL-YRQA-HENS-SSGHHELSYNL---------------SSKLLHLAWHPTTNLIACAN-GNSLFF 418 (421)
Q Consensus 358 ~~~~~~~~~~~l~~g~-~d~~-~iw~-~~~~~~~~~~~---------------~~~v~~~~~spd~~~la~~~-~~~~~i 418 (421)
+ +. ++++-. .+.. +.|+ ..+.+....+. -.....++++|++.++++-. .+.|+-
T Consensus 333 d--G~-----lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 333 D--GN-----FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp T--CC-----EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred C--CC-----EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 6 33 445544 4444 5554 33333332222 24578999999988777766 455665
Q ss_pred E
Q 014644 419 H 419 (421)
Q Consensus 419 ~ 419 (421)
+
T Consensus 406 i 406 (409)
T 3hrp_A 406 Y 406 (409)
T ss_dssp E
T ss_pred E
Confidence 4
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.13 E-value=2.1e-08 Score=88.55 Aligned_cols=159 Identities=8% Similarity=0.049 Sum_probs=103.6
Q ss_pred cceEEEeecCCCCEEEEE-cC---------------CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEe----cC
Q 014644 139 FNINSISNNSDCETFVSA-DD---------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFH----PI 198 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d---------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~ 198 (421)
..+.++++.++|+++++. .+ +.|..|+.. ++..... .+......++|+ |+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~--------~~~~~~~~i~~~~~~d~d 186 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQVD--------TAFQFPNGIAVRHMNDGR 186 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEEEE--------EEESSEEEEEEEECTTSC
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEEec--------cCCCCcceEEEecccCCC
Confidence 457889999999988887 54 456666654 3332221 223446889999 99
Q ss_pred CCCeEEEE-EcCCeEEEEECC-cccccccchhhhccccccCCCcccccccc-cceeEEEEcCCCCEEEEecC-CeEEEEE
Q 014644 199 YCNLLAYS-SSRGFVRLVDMR-QSALCDHSARILRDAAESHGSKSFFTEII-ASISDIKFANDGQHLLSRDY-MNLKLWD 274 (421)
Q Consensus 199 ~~~~l~s~-~~d~~v~iwd~~-~~~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~-~~i~i~d 274 (421)
+ +.++.+ ..++.|.+||+. .+.... ...+.. +..+. ..+..++++++|+++++... +.|.+||
T Consensus 187 g-~~l~v~~~~~~~i~~~~~~~~g~~~~--~~~~~~----------~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 187 P-YQLIVAETPTKKLWSYDIKGPAKIEN--KKVWGH----------IPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp E-EEEEEEETTTTEEEEEEEEETTEEEE--EEEEEE----------CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred C-CEEEEEECCCCeEEEEECCCCCcccc--ceEEEE----------CCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 8 665555 467899999976 332110 011111 01112 45788999999988887644 8999999
Q ss_pred CCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEE-eeCCCeEEEEecCCC
Q 014644 275 IRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT-GSYSNLLRIFSHGVG 336 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~-~s~dg~i~iwd~~~~ 336 (421)
.++ ++.+..+..+...+ .+++|+|+++.|+. ...++.|..|++...
T Consensus 254 ~~~-g~~~~~~~~~~~~~---------------~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 254 PDG-GQPKMRIRCPFEKP---------------SNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTC-BSCSEEEECSSSCE---------------EEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCC-CcEeEEEeCCCCCc---------------eeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 875 56655555443322 68999999995554 455689999998753
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=2.3e-07 Score=83.86 Aligned_cols=254 Identities=11% Similarity=0.048 Sum_probs=145.1
Q ss_pred EEEEEEcCCCCeEEEEe----------CCCcEEEeecCCcee-EEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 38 RVRWCAAPNGSMFILST----------NDKTIKLWKVRDQKV-KKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 38 ~v~~~~~~~~~~l~t~s----------~d~~v~lwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
.+.+ +||+++++.+. .++.|.+||..+.+. ..+......... .........++++++++.
T Consensus 70 ~i~~--spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~-------~g~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 70 NPVA--AHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD-------VGPYSWMNANTPNNADLL 140 (373)
T ss_pred CeEE--CCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc-------cCCCccceEECCCCCEEE
Confidence 7888 79999888885 367899999987663 233221000000 000112345566666666
Q ss_pred ecccccccceeEEeecccceeeeeee-ecCCCCcceEEEeecCCCC-EEEEE-cCCcEEEEeCCCCceeeeeeecCCCCC
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKV-YPHAHDFNINSISNNSDCE-TFVSA-DDLRINLWNLEISDQCFNIVDMKPSNM 183 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~-~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~ 183 (421)
.........+.++| .+. +.+.. + .- .. ++.+.|+++ .+++. .||++.+++. .... .......+ ..
T Consensus 141 v~n~~~~~~v~viD-~t~---~~~~~~i-~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~-~~~~~~~~-~~ 208 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGG---SSDDQLL-SS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA-AGAGLVGA-ML 208 (373)
T ss_pred EEecCCCCeEEEEE-CCC---CEEeEEc-CC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE-EEEEeccc-cc
Confidence 55443234567777 666 55555 4 21 11 244556554 33444 8999999999 4433 32221100 00
Q ss_pred CccCCC-eeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 184 DDLTEV-ITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 184 ~~~~~~-v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
....+ .....+.+++ ..++..+..+.+.+.|+....... ...+.. ...... ...........+.++|+++.+
T Consensus 209 -~~~~p~~~~~~~~~~~-~~~~~~~~~~~v~vid~~~~~~~v--~~~~~~-~~~~~~--~~~~~p~g~~~~~~s~d~~~l 281 (373)
T 2mad_H 209 -TAAQNLLTQPAQANKS-GRIVWPVYSGKILQADISAAGATN--KAPIDA-LSGGRK--ADTWRPGGWQQVAYLKSSDGI 281 (373)
T ss_pred -cCCcceeecceeEecC-CEEEEEcCCceEEEEeccCCcceE--eeeeee-cCCccc--ccceecCceEeEEECCCCCEE
Confidence 11112 2235677776 555555578899999987543110 111111 000000 000011234457899998877
Q ss_pred EEec----------C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEee-CCCeEE
Q 014644 263 LSRD----------Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGS-YSNLLR 329 (421)
Q Consensus 263 ~~~~----------~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s-~dg~i~ 329 (421)
.... . +.|.++|+.+ .+.+..+.....+ .+++|+|||+ .++++. .++.|.
T Consensus 282 yV~~~~~~~~~~~~~~~~V~VID~~t-~~vv~~i~~g~~p----------------~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 282 YLLTSEQSAWKLHAAAKEVTSVTGLV-GQTSSQISLGHDV----------------DAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred EEEeccCCcccccCCCCeEEEEECCC-CEEEEEEECCCCc----------------CeEEECCCCCeEEEEEcCCCCeEE
Confidence 6642 1 5799999987 8888888655433 5899999999 777777 489999
Q ss_pred EEecCCC
Q 014644 330 IFSHGVG 336 (421)
Q Consensus 330 iwd~~~~ 336 (421)
++|+.++
T Consensus 345 ViD~~t~ 351 (373)
T 2mad_H 345 IYDAGAG 351 (373)
T ss_pred EEECCCC
Confidence 9999987
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.07 E-value=1.3e-07 Score=86.16 Aligned_cols=258 Identities=7% Similarity=-0.071 Sum_probs=144.4
Q ss_pred EEcCCCCeEEEEeC-C----CcEEEeecCCce-eEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc-----
Q 014644 42 CAAPNGSMFILSTN-D----KTIKLWKVRDQK-VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW----- 110 (421)
Q Consensus 42 ~~~~~~~~l~t~s~-d----~~v~lwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----- 110 (421)
.|.+++..+.++.. + ++|.+.|..+.+ +..+.....+ .+.+++++.++.....
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P----------------gia~SpDgk~lyVan~~~~~~ 142 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP----------------HPVAAEDGSFFAQASTVFERI 142 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC----------------EEEECTTSSCEEEEEEEEEET
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC----------------ceEECCCCCEEEEEecccccc
Confidence 45567776555544 3 799999999988 4444442221 2334445544433332
Q ss_pred ---ccccceeEEeecccceeeeeeeecCC------CCcceEEEeecCCCCEEEEE-c--CCcEEEEeCCCCceeeeeeec
Q 014644 111 ---TENMATKIANVGNSVHARCQKVYPHA------HDFNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDM 178 (421)
Q Consensus 111 ---~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~~~~~~l~s~-~--d~~i~lwd~~~~~~~~~~~~~ 178 (421)
.....+.++|..+. +.++.+.-+ .......++++|||++|+.+ . +++|.+.|+. ..+.+..+.+
T Consensus 143 ~~G~~~~~VsviD~~t~---~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~-t~kvv~~I~v 218 (426)
T 3c75_H 143 ARGKRTDYVEVFDPVTF---LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE-GKTFDRMLDV 218 (426)
T ss_dssp TEEEEEEEEEEECTTTC---CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT-TTEEEEEEEC
T ss_pred ccCCCCCEEEEEECCCC---cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC-CCeEEEEEEc
Confidence 01336778888776 444443111 12345678999999999986 3 5789999998 5555555533
Q ss_pred CCCCCCccCCCeeEEE-------------------------------------EecCCCCeEEEEEcCCeEEEEECCccc
Q 014644 179 KPSNMDDLTEVITSAE-------------------------------------FHPIYCNLLAYSSSRGFVRLVDMRQSA 221 (421)
Q Consensus 179 ~~~~~~~~~~~v~~~~-------------------------------------~~p~~~~~l~s~~~d~~v~iwd~~~~~ 221 (421)
.........+.-.-+. |.+++ ..++..+..+.|.+.|+....
T Consensus 219 ~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 219 PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSC
T ss_pred CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCc
Confidence 1100000000001122 34444 333333444555555554322
Q ss_pred ccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-----------CCeEEEEECCCCCcceeEEeeccC
Q 014644 222 LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-----------YMNLKLWDIRMDSTPVATFKIHEH 290 (421)
Q Consensus 222 ~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----------~~~i~i~d~~~~~~~~~~~~~~~~ 290 (421)
... ...+.. .................++++|+++.++... .+.|.++|+.+ .+.+.++.....
T Consensus 298 ~~v--~~~~~~---~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T-~kvv~~I~vg~~ 371 (426)
T 3c75_H 298 ATF--RAPIEA---LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET-GERINKIELGHE 371 (426)
T ss_dssp EEE--CCCEES---SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEEE
T ss_pred eEE--eeeeee---ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC-CeEEEEEECCCC
Confidence 110 000000 0000000000011223478999988776542 15799999997 888888876554
Q ss_pred cccccccccCCCcceeeeEEEEcCCCC-EEEEee-CCCeEEEEecCCCCCceeEE
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGS-YSNLLRIFSHGVGSAGGITV 343 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s-~dg~i~iwd~~~~~~~~~~~ 343 (421)
+ .++.|+|||+ ++++.. .++.|.++|+.++ +....+
T Consensus 372 P----------------~gia~spDg~~~lyv~n~~s~~VsVID~~t~-kvv~tI 409 (426)
T 3c75_H 372 I----------------DSINVSQDAEPLLYALSAGTQTLHIYDAATG-EELRSV 409 (426)
T ss_dssp E----------------CEEEECCSSSCEEEEEETTTTEEEEEETTTC-CEEEEE
T ss_pred c----------------CeEEEccCCCEEEEEEcCCCCeEEEEECCCC-CEEEEe
Confidence 3 5899999999 888887 5999999999988 444443
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=8.5e-08 Score=84.36 Aligned_cols=231 Identities=10% Similarity=-0.014 Sum_probs=132.4
Q ss_pred ccEEEEEEEEcCCCC-eEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccccc
Q 014644 34 EKINRVRWCAAPNGS-MFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTE 112 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~-~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 112 (421)
.......| +++++ ++++...++.|..|+. +++...+.. ... .+..+...+++..+.....
T Consensus 45 ~~~egp~~--~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~--~~~------------~~~gl~~d~dG~l~v~~~~-- 105 (305)
T 3dr2_A 45 TWSEGPAW--WEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLD--ATA------------FTNGNAVDAQQRLVHCEHG-- 105 (305)
T ss_dssp SSEEEEEE--EGGGTEEEEEETTTTEEEEEET-TSCEEEEEE--SCS------------CEEEEEECTTSCEEEEETT--
T ss_pred cCccCCeE--eCCCCEEEEEECCCCEEEEEeC-CCCEEEEeC--CCC------------ccceeeECCCCCEEEEECC--
Confidence 44578889 57777 6777778899999997 444333322 112 1222333333332222110
Q ss_pred ccceeEEeecccceeeeeeeecCC-CCcceEEEeecCCCCEEEE----E-c-------------CCcEEEEeCCCCceee
Q 014644 113 NMATKIANVGNSVHARCQKVYPHA-HDFNINSISNNSDCETFVS----A-D-------------DLRINLWNLEISDQCF 173 (421)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s----~-~-------------d~~i~lwd~~~~~~~~ 173 (421)
...+..++.+ +......... .+ ....++++++.|+|+++++ | . .+.|..||.. .++..
T Consensus 106 ~~~v~~~~~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~ 182 (305)
T 3dr2_A 106 RRAITRSDAD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQ 182 (305)
T ss_dssp TTEEEEECTT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCE
T ss_pred CCEEEEECCC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEE
Confidence 1233444433 2100111111 11 1234678999999999886 3 2 2456666664 23322
Q ss_pred eeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC------CeEEEEECCcccccccchhhhccccccCCCcccccccc
Q 014644 174 NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 247 (421)
Q Consensus 174 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 247 (421)
.+ . .......++|+|++ +.|+.+... +.|.+||+..+.... ...+.. ...
T Consensus 183 -~~-------~-~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~--~~~~~~------------~~~ 238 (305)
T 3dr2_A 183 -RM-------A-DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHD--RRHFAS------------VPD 238 (305)
T ss_dssp -EE-------E-EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEE--EEEEEC------------CSS
T ss_pred -EE-------e-cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccC--CeEEEE------------CCC
Confidence 21 1 22346789999999 777776654 789999987543110 011110 012
Q ss_pred cceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCe
Q 014644 248 ASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNL 327 (421)
Q Consensus 248 ~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~ 327 (421)
.....++++++|++.++. .+.|.+|+.. ++.+..+..+... .+++|+|+++.|..++.++.
T Consensus 239 ~~pdgi~~d~~G~lwv~~-~~gv~~~~~~--g~~~~~~~~~~~~----------------~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 239 GLPDGFCVDRGGWLWSSS-GTGVCVFDSD--GQLLGHIPTPGTA----------------SNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp SCCCSEEECTTSCEEECC-SSEEEEECTT--SCEEEEEECSSCC----------------CEEEECTTSCEEEEEETTEE
T ss_pred CCCCeEEECCCCCEEEec-CCcEEEECCC--CCEEEEEECCCce----------------eEEEEeCCCCEEEEEcCCeE
Confidence 345678999999955554 4459999984 6777777655432 58999999988888877543
Q ss_pred EE
Q 014644 328 LR 329 (421)
Q Consensus 328 i~ 329 (421)
.+
T Consensus 300 ~~ 301 (305)
T 3dr2_A 300 WM 301 (305)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.02 E-value=6.7e-07 Score=80.08 Aligned_cols=261 Identities=11% Similarity=0.045 Sum_probs=146.1
Q ss_pred EEEEEEcCCCCeEEEEe----------CCCcEEEeecCCce-eEEeeecCCC-CCcccccccccccceeeccCCCCceee
Q 014644 38 RVRWCAAPNGSMFILST----------NDKTIKLWKVRDQK-VKKIKEMDHF-PFVSSENTLLAEKNFMNEHNPPSFAHG 105 (421)
Q Consensus 38 ~v~~~~~~~~~~l~t~s----------~d~~v~lwd~~~~~-~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~ 105 (421)
.+.+ +|+++++.++. .++.|.+||..+.+ ...+...... ..+ ........++++++++
T Consensus 82 ~va~--spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~--------g~~P~~~a~spDGk~l 151 (386)
T 3sjl_D 82 NPVV--ADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV--------GTYPWMTSLTPDGKTL 151 (386)
T ss_dssp EEEE--CTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB--------SCCGGGEEECTTSSEE
T ss_pred cEEE--CCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc--------CCCCceEEEcCCCCEE
Confidence 3888 79999887765 36789999999987 3344332100 000 0012234455566655
Q ss_pred eecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC
Q 014644 106 YHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD 184 (421)
Q Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 184 (421)
..........+.++|..+. +.+..+.... . ...+....+.+++. .||++.+.++...++..... .+ .+.
T Consensus 152 yVan~~~~~~VsVID~~t~---~vv~tI~v~g---~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~-~~--~~~ 221 (386)
T 3sjl_D 152 LFYQFSPAPAVGVVDLEGK---AFKRMLDVPD---C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH-TE--VFH 221 (386)
T ss_dssp EEEECSSSCEEEEEETTTT---EEEEEEECCS---E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE-CC--CCS
T ss_pred EEEEcCCCCeEEEEECCCC---cEEEEEECCC---c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEee-cc--eec
Confidence 5443322456888888887 5555551111 1 11222233444444 77777777776423322111 00 111
Q ss_pred ccCCCee-EEEEe-cCCCCeEEEEEcCCeEEEEECCccccc-ccchhhhccccccCCCcccccccccceeEEEEcCCCCE
Q 014644 185 DLTEVIT-SAEFH-PIYCNLLAYSSSRGFVRLVDMRQSALC-DHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 261 (421)
Q Consensus 185 ~~~~~v~-~~~~~-p~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (421)
....++. ...|. ++| + ++..+.+|.|.+.|+..+... .....++......+ .........++++|+++.
T Consensus 222 ~~~~~~~~~~~~~~~dG-~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~------g~~p~g~q~~a~~~~~~~ 293 (386)
T 3sjl_D 222 PEDEFLINHPAYSQKAG-R-LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD------GWRPGGWQQVAYHRALDR 293 (386)
T ss_dssp CTTSCBCSCCEEETTTT-E-EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHT------TEEECSSSCEEEETTTTE
T ss_pred cccccccccceeEcCCC-c-EEEEeCCCEEEEEECCCCcceeecceeccccccccc------cccCCCcceeeECCCCCe
Confidence 1112222 24665 565 4 444677899999999765421 11111000000000 001223446788999888
Q ss_pred EEEec----------C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC-EEEEee-CCCeE
Q 014644 262 LLSRD----------Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL-HFATGS-YSNLL 328 (421)
Q Consensus 262 l~~~~----------~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~~s-~dg~i 328 (421)
+.... - +.|.++|+.+ .+.+..+...... .+++++||++ +|++.. .++.|
T Consensus 294 lyV~~~~~~~~~hk~~~~~V~viD~~t-~kv~~~i~vg~~~----------------~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 294 IYLLVDQRDEWRHKTASRFVVVLDAKT-GERLAKFEMGHEI----------------DSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTT-CCEEEEEEEEEEE----------------CEEEECSSSSCEEEEEETTTTEE
T ss_pred EEEEeccccccccCCCCCEEEEEECCC-CeEEEEEECCCCc----------------ceEEECCCCCeEEEEEcCCCCeE
Confidence 77642 1 5799999997 8888887765433 5899999997 666654 58999
Q ss_pred EEEecCCCCCceeEEe
Q 014644 329 RIFSHGVGSAGGITVE 344 (421)
Q Consensus 329 ~iwd~~~~~~~~~~~~ 344 (421)
.++|..++ +....+.
T Consensus 357 sViD~~t~-k~~~~i~ 371 (386)
T 3sjl_D 357 YIHDAESG-EELRSVN 371 (386)
T ss_dssp EEEETTTC-CEEEEEC
T ss_pred EEEECCCC-cEEEEec
Confidence 99999987 4444443
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=2.8e-07 Score=81.88 Aligned_cols=219 Identities=8% Similarity=0.021 Sum_probs=127.0
Q ss_pred CCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeeccc
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNS 124 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 124 (421)
.++.++++...++.|..||..+++....... . .+.++++. +++.++... ...+.+++..++
T Consensus 59 ~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~--~-~v~~i~~~------------~dg~l~v~~----~~gl~~~d~~~g 119 (326)
T 2ghs_A 59 ASGTAWWFNILERELHELHLASGRKTVHALP--F-MGSALAKI------------SDSKQLIAS----DDGLFLRDTATG 119 (326)
T ss_dssp TTTEEEEEEGGGTEEEEEETTTTEEEEEECS--S-CEEEEEEE------------ETTEEEEEE----TTEEEEEETTTC
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEECC--C-cceEEEEe------------CCCeEEEEE----CCCEEEEECCCC
Confidence 5677888888889999999888775444322 1 23333333 222222221 112455555443
Q ss_pred ceeeeeeeec--CC-CCcceEEEeecCCCCEEEEE-cC----CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEe
Q 014644 125 VHARCQKVYP--HA-HDFNINSISNNSDCETFVSA-DD----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFH 196 (421)
Q Consensus 125 ~~~~~~~~~~--~~-h~~~v~~l~~~~~~~~l~s~-~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 196 (421)
+...... .+ ....+++++++|+|+++++. .+ ....||.++ .++..... .+......++|+
T Consensus 120 ---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~--------~~~~~~~~i~~s 187 (326)
T 2ghs_A 120 ---VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLF--------ADISIPNSICFS 187 (326)
T ss_dssp ---CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEE--------EEESSEEEEEEC
T ss_pred ---cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEee--------CCCcccCCeEEc
Confidence 2211110 11 13468999999999987765 32 234444443 34333221 122346789999
Q ss_pred cCCCCeEEEE-EcCCeEEEEECC--cc-cccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEE
Q 014644 197 PIYCNLLAYS-SSRGFVRLVDMR--QS-ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLK 271 (421)
Q Consensus 197 p~~~~~l~s~-~~d~~v~iwd~~--~~-~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~ 271 (421)
|++ +.++.+ +.++.|.+||+. ++ ..... +.+.. +......+..++++++|.+.++... +.|.
T Consensus 188 ~dg-~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~--~~~~~----------~~~~~~~p~gi~~d~~G~lwva~~~~~~v~ 254 (326)
T 2ghs_A 188 PDG-TTGYFVDTKVNRLMRVPLDARTGLPTGKA--EVFID----------STGIKGGMDGSVCDAEGHIWNARWGEGAVD 254 (326)
T ss_dssp TTS-CEEEEEETTTCEEEEEEBCTTTCCBSSCC--EEEEE----------CTTSSSEEEEEEECTTSCEEEEEETTTEEE
T ss_pred CCC-CEEEEEECCCCEEEEEEcccccCCcccCc--eEEEE----------CCCCCCCCCeeEECCCCCEEEEEeCCCEEE
Confidence 999 766544 457899999986 44 22110 11110 0111345678999999987777644 8899
Q ss_pred EEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEc-CCCCEEEEeeC
Q 014644 272 LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS-GDGLHFATGSY 324 (421)
Q Consensus 272 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~~~~l~~~s~ 324 (421)
+||.. ++.+..+..+...+ .+++|+ |+++.|+.++.
T Consensus 255 ~~d~~--g~~~~~i~~~~~~~---------------~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 255 RYDTD--GNHIARYEVPGKQT---------------TCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EECTT--CCEEEEEECSCSBE---------------EEEEEESTTSCEEEEEEB
T ss_pred EECCC--CCEEEEEECCCCCc---------------EEEEEecCCCCEEEEEec
Confidence 99983 66666665544322 689998 88877765543
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.90 E-value=1.2e-09 Score=98.83 Aligned_cols=181 Identities=10% Similarity=0.070 Sum_probs=94.1
Q ss_pred CCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeeccc
Q 014644 45 PNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGNS 124 (421)
Q Consensus 45 ~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 124 (421)
-++..+++++.|+.|..||..+++..-...
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~-------------------------------------------------- 36 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLK-------------------------------------------------- 36 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEE--------------------------------------------------
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEec--------------------------------------------------
Confidence 357899999999999999999887321111
Q ss_pred ceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccC-CCee-EEEEecCCCC
Q 014644 125 VHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLT-EVIT-SAEFHPIYCN 201 (421)
Q Consensus 125 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~-~~v~-~~~~~p~~~~ 201 (421)
. +.+.+..+..++..++++ .|+.|+.||.++ ++..... ..+. ..+. +..+. .+ .
T Consensus 37 -----------~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~-------~~~~~~~~~~sp~~~-~~-~ 93 (369)
T 2hz6_A 37 -----------E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKL-------PFTIPELVQASPCRS-SD-G 93 (369)
T ss_dssp -----------C--CCSCCCC-----CCEEECTTTCCEEEC------CCSEEC-------SCCHHHHHTTCSCC------
T ss_pred -----------C--CCceecceEcCCCEEEEeCCCCEEEEEECCC-Cceeeee-------eccCccccccCceEe-cC-C
Confidence 1 122233344567777777 999999999973 3332222 1110 0110 11111 23 5
Q ss_pred eEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCc
Q 014644 202 LLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDST 280 (421)
Q Consensus 202 ~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~ 280 (421)
.+++++.|+.|+.||..+++.. ..+..+ . ...++|++..+++++. +.|+.||.++ ++
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~~----w~~~~~--------------~---~~~~~p~~~~v~~~~~dg~v~a~d~~t-G~ 151 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEKQ----QTLSSA--------------F---ADSLSPSTSLLYLGRTEYTITMYDTKT-RE 151 (369)
T ss_dssp -CCCCEEEEEEEEECCC-------------------------------------------EEEEEEEEEEECCCSSS-SS
T ss_pred EEEEEeCCCEEEEEECCCCcEE----EEecCC--------------C---cccccccCCEEEEEecCCEEEEEECCC-CC
Confidence 6778888999999999998743 222221 1 2345567778877765 9999999987 77
Q ss_pred ceeEEeeccCcccccccccCCCcceeeeEEEEcCCC---CEEEEeeCCCeEEEEecCCCC
Q 014644 281 PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG---LHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~l~~~s~dg~i~iwd~~~~~ 337 (421)
.+..+..... ...+++++. ..+++++.||.|+.||..+++
T Consensus 152 ~~W~~~~~~~-----------------~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 152 LRWNATYFDY-----------------AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCCEEEEEEE-----------------CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EEEeEecccc-----------------cCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 6655543221 123333332 456778899999999999883
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.90 E-value=9e-07 Score=80.67 Aligned_cols=256 Identities=10% Similarity=0.010 Sum_probs=145.6
Q ss_pred cceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-c----------CCcEEEEeCCCCceeeeeeecC-CC
Q 014644 114 MATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-D----------DLRINLWNLEISDQCFNIVDMK-PS 181 (421)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~----------d~~i~lwd~~~~~~~~~~~~~~-~~ 181 (421)
..+.+.|..+. +.+..+..+ ..+ .++++||+++|+.+ . ++.|.++|.. ..+....+.+. ..
T Consensus 99 ~~VsVID~~t~---~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~-t~~vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTG---RILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV-TFLPIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTT---EEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT-TCCEEEEEEETTCC
T ss_pred CeEEEEECCCC---EEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC-CCcEEEEEECCCcc
Confidence 57788888877 666666223 334 79999999988876 3 5689999998 45555554321 00
Q ss_pred CCCccCCCeeEEEEecCCCCeEEEEEc--CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCC
Q 014644 182 NMDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDG 259 (421)
Q Consensus 182 ~~~~~~~~v~~~~~~p~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (421)
.. ........+.|+||| ++++.+.. ++.|.+.|+.+++.. ..+.. .. +....|++
T Consensus 172 r~-~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~~t~kvv----~~I~v--------------~g---~~~~~p~g 228 (426)
T 3c75_H 172 RF-LVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDLEGKTFD----RMLDV--------------PD---CYHIFPAS 228 (426)
T ss_dssp CC-CBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEETTTTEEE----EEEEC--------------CS---EEEEEEEE
T ss_pred cc-ccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEECCCCeEE----EEEEc--------------CC---ceeeccCC
Confidence 00 012335678999999 88887764 589999999987654 22222 01 12233333
Q ss_pred -CEEEE-ecCCeEEEEECCCCCcceeEE----eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 260 -QHLLS-RDYMNLKLWDIRMDSTPVATF----KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 260 -~~l~~-~~~~~i~i~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
+.+++ ..+|.+.+.++.. ++..... ...... ++ ..+.+++++..++..+..+.+.+.|+
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p------------~~--~~~~~~~dg~~~~~~s~~g~V~ViD~ 293 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDEL------------LI--NHPAFSLRSGRLVWPTYTGKIFQADL 293 (426)
T ss_dssp TTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSC------------BC--SCCEECTTTCEEEEEBTTSEEEEEEE
T ss_pred CcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCc------------ee--eEeeecCCCCEEEEEeCCCcEEEEec
Confidence 22222 3346666667632 4443221 111111 11 24578999888777788899999998
Q ss_pred CCCCCce-eEEec----------CCCCccceeeecCCcccccccceeeeeccc--------Cc-ccC--C-CCCcccccc
Q 014644 334 GVGSAGG-ITVEA----------GKNENRKPILQAAPRARRSSLSNLTRGLYR--------QA-HEN--S-SSGHHELSY 390 (421)
Q Consensus 334 ~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d--------~~-~iw--~-~~~~~~~~~ 390 (421)
....... ..+.. .......++++++ +. .+.....+ +. .++ + ........+
T Consensus 294 ~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d--g~-----rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I 366 (426)
T 3c75_H 294 TAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ--SD-----RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI 366 (426)
T ss_dssp CSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG--GT-----EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE
T ss_pred cCCceEEeeeeeeccccccccccccCCceeeEEcCC--CC-----EEEEEecccccccccCCCCEEEEEECCCCeEEEEE
Confidence 6542110 11110 0111223566666 22 33332211 12 344 2 222222233
Q ss_pred ccccCeEEEEEccCCC-eEEEec--CCceEEEeC
Q 014644 391 NLSSKLLHLAWHPTTN-LIACAN--GNSLFFHYA 421 (421)
Q Consensus 391 ~~~~~v~~~~~spd~~-~la~~~--~~~~~i~~~ 421 (421)
........++|+||++ +|+++. ++.+.++++
T Consensus 367 ~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 367 ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp EEEEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 3344678999999999 777776 677988874
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.86 E-value=6.2e-07 Score=80.26 Aligned_cols=215 Identities=9% Similarity=0.060 Sum_probs=121.3
Q ss_pred ccccEEEEEEEEcCCCCeEEEEeC-----CCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeee
Q 014644 32 IEEKINRVRWCAAPNGSMFILSTN-----DKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGY 106 (421)
Q Consensus 32 h~~~V~~v~~~~~~~~~~l~t~s~-----d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (421)
|-..+..|++ +++++++++-.. ++.|.+||+.++++........ .
T Consensus 65 ~~~~p~gv~~--d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~-~--------------------------- 114 (343)
T 2qe8_A 65 TFDTVLGIKS--DGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPP-P--------------------------- 114 (343)
T ss_dssp CCSCEEEEEE--CSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCT-T---------------------------
T ss_pred ceeEeeEEEE--cCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECCh-h---------------------------
Confidence 4567899999 777777666544 5789999998876322211100 0
Q ss_pred ecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-----cCCcEEEEeCCCCceeeeeeecC--
Q 014644 107 HLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-----DDLRINLWNLEISDQCFNIVDMK-- 179 (421)
Q Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-----~d~~i~lwd~~~~~~~~~~~~~~-- 179 (421)
. ..+...+..+++++++..+..+ .++.|.+||+. .++..+.+...
T Consensus 115 --------------------------~-~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~-~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 115 --------------------------I-TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ-TGLAARVLQGYPG 166 (343)
T ss_dssp --------------------------T-SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT-TCCEEEECTTCTT
T ss_pred --------------------------h-cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC-CCCEEEEecCCCc
Confidence 0 1223456788888764444333 36789999987 44444443110
Q ss_pred --C--CCC--Cc--------------cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCccccccc---chhhhcccccc
Q 014644 180 --P--SNM--DD--------------LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDH---SARILRDAAES 236 (421)
Q Consensus 180 --~--~~~--~~--------------~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~---~~~~~~~h~~~ 236 (421)
+ ..+ .+ -...+..++|+|++ +.|+.+..++. ++|.+........ ....+..
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~---- 240 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSK---- 240 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTT----
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcc----
Confidence 0 000 00 01236889999999 88888776653 4444432111000 0000000
Q ss_pred CCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC
Q 014644 237 HGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 315 (421)
Q Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 315 (421)
-...++......++++++|.++++... +.|.+||... ++........ ... ...+++|.++
T Consensus 241 ----~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~-G~~~~~~~~~-~~~-------------~p~~va~~~~ 301 (343)
T 2qe8_A 241 ----IERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD-RAYKLLVTDE-KLS-------------WTDSFNFGSD 301 (343)
T ss_dssp ----CEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT-TEEEEEEECG-GGS-------------CEEEEEECTT
T ss_pred ----eEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC-CCEEEEEECC-cee-------------cCCeeEECCC
Confidence 000112345678999999988888766 8999999843 5432222211 110 1168999999
Q ss_pred CCEEEEeeCCCeEE
Q 014644 316 GLHFATGSYSNLLR 329 (421)
Q Consensus 316 ~~~l~~~s~dg~i~ 329 (421)
++++++.+..+.+.
T Consensus 302 g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 302 GYLYFDCNQLHHSA 315 (343)
T ss_dssp SCEEEEECCGGGSG
T ss_pred CcEEEEeCcccccc
Confidence 98877776554443
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.81 E-value=1.8e-06 Score=80.84 Aligned_cols=291 Identities=8% Similarity=0.035 Sum_probs=158.5
Q ss_pred EEEEeCCCcEEEeecCCce-eEEeeecCCCCCcc------ccc------------ccccccc-eeeccCCCCceeee---
Q 014644 50 FILSTNDKTIKLWKVRDQK-VKKIKEMDHFPFVS------SEN------------TLLAEKN-FMNEHNPPSFAHGY--- 106 (421)
Q Consensus 50 l~t~s~d~~v~lwd~~~~~-~~~~~~~~~~~~v~------~~~------------~~~~~~~-~~~~~~~~~~~~~~--- 106 (421)
|.+|+..|.|+|+-+.++. ++.+..+......- +.. |....+. .+.....+......
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 6688899999999998887 66666655433211 000 0001111 11111111111111
Q ss_pred --eccc----c-cccceeEEeecccceeeeeeeecCCCCcceEEEee-c-CCCCEEEEE-c------------------C
Q 014644 107 --HLEW----T-ENMATKIANVGNSVHARCQKVYPHAHDFNINSISN-N-SDCETFVSA-D------------------D 158 (421)
Q Consensus 107 --~g~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-~-~~~~~l~s~-~------------------d 158 (421)
+|.+ + ....+.+.|+.+. ++.+.+.-........+++ + |++++++++ . +
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~---~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVM---KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTT---EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCc---eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 1222 1 1225666777776 6656331123345778887 5 899988876 2 3
Q ss_pred CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC---------------eEEEEECCccccc
Q 014644 159 LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG---------------FVRLVDMRQSALC 223 (421)
Q Consensus 159 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~---------------~v~iwd~~~~~~~ 223 (421)
+.+.+.|.+ ..+....+.+ .+ ....++++|+| +++++++.+. .|.+.|.......
T Consensus 175 ~~vtvID~~-t~~v~~qI~V-----gg---~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~ 244 (595)
T 1fwx_A 175 NVFTAVDAD-KWEVAWQVLV-----SG---NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 244 (595)
T ss_dssp EEEEEEETT-TTEEEEEEEE-----SS---CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred ceEEEEECC-CCeEEEEEEe-----CC---CccceEECCCC-CEEEEEecCcccCcchhhccccccceEEEeeccceeEe
Confidence 478889988 4444444421 11 34567899999 8888777553 3555554332110
Q ss_pred --------ccchhhhccccccCCCc--ccccccccceeEEEEcCCCCEEEEecC--CeEEEEECCCCCc-----------
Q 014644 224 --------DHSARILRDAAESHGSK--SFFTEIIASISDIKFANDGQHLLSRDY--MNLKLWDIRMDST----------- 280 (421)
Q Consensus 224 --------~~~~~~~~~h~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~i~i~d~~~~~~----------- 280 (421)
...+.+++. ....... ...+. .....++.++|||+++++++. .+|.++|+.+ .+
T Consensus 245 v~~Gk~~~i~~V~VID~-~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~-~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 245 IAAGDYQELNGVKVVDG-RKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTR-FDAVFYENADPRS 321 (595)
T ss_dssp HHHTCSEEETTEEEEEC-SGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGG-HHHHHHSCCCGGG
T ss_pred ccCCCeeEECcEEEEeC-cccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcc-cccccccccCccc
Confidence 000111221 0000000 00111 235678999999999988753 8999999974 21
Q ss_pred -ceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEE-eeCCCeEEEEecCCC---------CCceeEEecCCCC
Q 014644 281 -PVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFAT-GSYSNLLRIFSHGVG---------SAGGITVEAGKNE 349 (421)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~-~s~dg~i~iwd~~~~---------~~~~~~~~~~~~~ 349 (421)
.+........+ +.++|+|+| .+++ .-.|+.|.+||+.+. .+.+..+..|..+
T Consensus 322 ~v~~~v~vG~gP----------------~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 322 AVVAEPELGLGP----------------LHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp GEEECCBCCSCE----------------EEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred ceEEEcCCCCCc----------------ceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 22222222222 689999999 5554 456999999999862 2445566655443
Q ss_pred c-----cceeeecCCcccccccceeeeecccCc-ccC
Q 014644 350 N-----RKPILQAAPRARRSSLSNLTRGLYRQA-HEN 380 (421)
Q Consensus 350 ~-----~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw 380 (421)
. .....+++ |+ +|++...-.+ ++-
T Consensus 385 Gh~~~~~g~t~~~D--Gk-----~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 385 GHLKTVMGETLDAT--ND-----WLVCLSKFSKDRFL 414 (595)
T ss_dssp EEEEETTTTSTTCC--SS-----EEEEEESCCTTSSC
T ss_pred ccceeccceEeCCC--CC-----EEEEcCCCCccccc
Confidence 2 33344555 44 6666655554 543
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.78 E-value=4.9e-06 Score=75.20 Aligned_cols=195 Identities=11% Similarity=0.076 Sum_probs=108.4
Q ss_pred ceeEEeecccceeeeeeeecCC-CC-cceEEEeecCCCCEEEEEc--------------------CCcEEEEeCCCCcee
Q 014644 115 ATKIANVGNSVHARCQKVYPHA-HD-FNINSISNNSDCETFVSAD--------------------DLRINLWNLEISDQC 172 (421)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~-h~-~~v~~l~~~~~~~~l~s~~--------------------d~~i~lwd~~~~~~~ 172 (421)
.+.+.|.++. +.+..+..+ .. .--..+.|+|+++.++++. +.+|.+||+. ..+.
T Consensus 165 ~v~vlD~~T~---~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~-~~k~ 240 (462)
T 2ece_A 165 GILMLDHYSF---EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR-KRKR 240 (462)
T ss_dssp EEEEECTTTC---CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT-TTEE
T ss_pred eEEEEECCCC---eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC-CCcE
Confidence 5677777766 666665212 21 2234578899999999873 6899999998 4566
Q ss_pred eeeeecCCCCCCccCCCeeEEEE--ecCCCCeEEEEE------cCCeEEEEECCcccccccchhhhccccccCCCcc---
Q 014644 173 FNIVDMKPSNMDDLTEVITSAEF--HPIYCNLLAYSS------SRGFVRLVDMRQSALCDHSARILRDAAESHGSKS--- 241 (421)
Q Consensus 173 ~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~--- 241 (421)
...+++. ........+.| +|++ ++++.++ .+++|.+|....+... ..+.++. ...+....
T Consensus 241 ~~tI~vg-----~~g~~P~~i~f~~~Pdg-~~aYV~~e~~~~~Lss~V~v~~~d~g~~~--~~~vIdi-~~~~v~~~lp~ 311 (462)
T 2ece_A 241 IHSLTLG-----EENRMALELRPLHDPTK-LMGFINMVVSLKDLSSSIWLWFYEDGKWN--AEKVIEI-PAEPLEGNLPE 311 (462)
T ss_dssp EEEEESC-----TTEEEEEEEEECSSTTC-CEEEEEEEEETTTCCEEEEEEEEETTEEE--EEEEEEE-CCEECCSSCCG
T ss_pred eeEEecC-----CCCCccceeEeeECCCC-CEEEEEEeeeccCCCceEEEEEecCCcee--EEEEEeC-CCccccccccc
Confidence 6665321 11123455656 9999 6666555 5678887766543211 1111111 00000000
Q ss_pred ---cccccccceeEEEEcCCCCEEEEecC--CeEEEEECCCCC--cceeEEeeccCcccccccccCCCcceeeeEEEEcC
Q 014644 242 ---FFTEIIASISDIKFANDGQHLLSRDY--MNLKLWDIRMDS--TPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG 314 (421)
Q Consensus 242 ---~~~~~~~~v~~~~~s~~~~~l~~~~~--~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 314 (421)
-+.+-......|.++|||++|.++.. +.|.+||+...+ +.+..+...... .+............-..++++|
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~-~~~~~~~G~~~~ggPr~~~lSp 390 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIF-HRADHPAGHKLTGAPQMLEISR 390 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTT-TCBCCTTSCCCCSCCCCEEECT
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCee-ccccccccccCCCCCCEEEEcC
Confidence 00111245789999999999988753 899999986322 333333322100 0000000000000015799999
Q ss_pred CCCEEEEee
Q 014644 315 DGLHFATGS 323 (421)
Q Consensus 315 ~~~~l~~~s 323 (421)
||++|+++.
T Consensus 391 DGk~LyVaN 399 (462)
T 2ece_A 391 DGRRVYVTN 399 (462)
T ss_dssp TSSEEEEEC
T ss_pred CCCEEEEEc
Confidence 999999887
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.77 E-value=8.4e-07 Score=79.48 Aligned_cols=77 Identities=12% Similarity=0.041 Sum_probs=56.5
Q ss_pred EEEcCCCCEEEEe-c---------CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCE-EEE
Q 014644 253 IKFANDGQHLLSR-D---------YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH-FAT 321 (421)
Q Consensus 253 ~~~s~~~~~l~~~-~---------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~-l~~ 321 (421)
++++||++.+..+ . .+.+.++|+.+ .+.+..+.....+ ..++|+|||++ +++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~~p----------------~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGHDS----------------DAIIAAQDGASDNYA 331 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEEEE----------------CEEEECCSSSCEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCCCc----------------ceEEECCCCCEEEEE
Confidence 7899999887754 2 22566999987 7777777665543 58999999984 556
Q ss_pred ee-CCCeEEEEecCCCCCceeEEecCC
Q 014644 322 GS-YSNLLRIFSHGVGSAGGITVEAGK 347 (421)
Q Consensus 322 ~s-~dg~i~iwd~~~~~~~~~~~~~~~ 347 (421)
.. .++.|.++|+.+. +....+....
T Consensus 332 ~~~~~~~VsVID~~t~-kvv~~I~vg~ 357 (368)
T 1mda_H 332 NSAGTEVLDIYDAASD-QDQSSVELDK 357 (368)
T ss_dssp EETTTTEEEEEESSSC-EEEEECCCCS
T ss_pred ccCCCCeEEEEECCCC-cEEEEEECCC
Confidence 66 5999999999987 5455554443
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.74 E-value=2e-05 Score=71.27 Aligned_cols=316 Identities=9% Similarity=-0.040 Sum_probs=143.6
Q ss_pred CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCccccccccccccee-eccCCCCceeeeecccccccceeEEeecccc
Q 014644 47 GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFM-NEHNPPSFAHGYHLEWTENMATKIANVGNSV 125 (421)
Q Consensus 47 ~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 125 (421)
+..+.+++.++.|..+|..+++..-.......... .......+. .........++. . ..+.+..+|..++
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~v~--~--~~g~l~a~d~~tG- 123 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW----FSKEPALLSGGVTVSGGHVYIG--S--EKAQVYALNTSDG- 123 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---C----CSCCCCCEEEEEEEETTEEEEE--E--TTSEEEEEETTTC-
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCcccccc----ccccCcccccCceEeCCEEEEE--c--CCCEEEEEECCCC-
Confidence 56788888899999999998884433222111000 000000010 011111111111 1 1234455555554
Q ss_pred eeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE
Q 014644 126 HARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 204 (421)
Q Consensus 126 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 204 (421)
+.+..+ ............. +..++.+ .++.|..+|..++....+.. .....+... ........ + ..++
T Consensus 124 --~~~W~~-~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~~~~~~~~--~~~~~~~~--~-~~v~ 192 (376)
T 3q7m_A 124 --TVAWQT-KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVN-LDMPSLSLR--GESAPTTA--F-GAAV 192 (376)
T ss_dssp --CEEEEE-ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEE-CCC-----C--CCCCCEEE--T-TEEE
T ss_pred --CEEEEE-eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEe-CCCCceeec--CCCCcEEE--C-CEEE
Confidence 333333 1111111111121 3466666 89999999998444443321 110000000 00112222 2 4677
Q ss_pred EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-CCeEEEEECCCCCccee
Q 014644 205 YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVA 283 (421)
Q Consensus 205 s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~i~i~d~~~~~~~~~ 283 (421)
.++.++.|..+|..+++.. +......+.....+............ .+..+..++ ++.+..+|.++ ++.+.
T Consensus 193 ~g~~~g~l~~~d~~tG~~~------w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~t-G~~~w 263 (376)
T 3q7m_A 193 VGGDNGRVSAVLMEQGQMI------WQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRS-GQIMW 263 (376)
T ss_dssp ECCTTTEEEEEETTTCCEE------EEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTT-CCEEE
T ss_pred EEcCCCEEEEEECCCCcEE------EEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCC-CcEEe
Confidence 7888999999999887643 11100000000000000000011111 234555554 48999999986 77665
Q ss_pred EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe-cCCCCccceeeecCCccc
Q 014644 284 TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE-AGKNENRKPILQAAPRAR 362 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 362 (421)
....... ..+.. ++..|+.++.++.|+.+|..++.. .-... .............
T Consensus 264 ~~~~~~~-----------------~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~----- 318 (376)
T 3q7m_A 264 KRELGSV-----------------NDFIV--DGNRIYLVDQNDRVMALTIDGGVT-LWTQSDLLHRLLTSPVLYN----- 318 (376)
T ss_dssp EECCCCE-----------------EEEEE--ETTEEEEEETTCCEEEEETTTCCE-EEEECTTTTSCCCCCEEET-----
T ss_pred eccCCCC-----------------CCceE--ECCEEEEEcCCCeEEEEECCCCcE-EEeecccCCCcccCCEEEC-----
Confidence 4432111 23333 466788888899999999998833 22222 1122222333322
Q ss_pred ccccceeeeecccCc-ccC--CCCCccccccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 363 RSSLSNLTRGLYRQA-HEN--SSSGHHELSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 363 ~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
..|..+..+|. ..+ ..++.+.........+.....-.++.+++...++.|+.|+
T Consensus 319 ----~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 319 ----GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ----TEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred ----CEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 25677777775 555 2233222211111222111111244444444466799886
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.70 E-value=9.9e-06 Score=68.60 Aligned_cols=169 Identities=15% Similarity=0.055 Sum_probs=102.6
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-c--CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-D--DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 204 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 204 (421)
+.++++..+.......++|++++.+++++ . +++|.+.|+. .++....+.+ ..+ .....+++. +..+.+
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~-tg~v~~~i~l-----~~~-~fgeGi~~~--g~~lyv 80 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQ-TGKVENIHKM-----DDS-YFGEGLTLL--NEKLYQ 80 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETT-TCCEEEEEEC-----CTT-CCEEEEEEE--TTEEEE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECC-CCCEEEEEec-----CCC-cceEEEEEe--CCEEEE
Confidence 55566622222346799999987666654 3 6899999999 5566655532 111 122345554 413444
Q ss_pred EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCccee
Q 014644 205 YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVA 283 (421)
Q Consensus 205 s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~ 283 (421)
+.-.++.+.++|..+.+.. ..+.. . .-....+++||+.++.+.. +.|.++|..+ .+.+.
T Consensus 81 ~t~~~~~v~viD~~t~~v~----~~i~~--------------g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~ 140 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNI----KNFTH--------------Q-MKDGWGLATDGKILYGSDGTSILYEIDPHT-FKLIK 140 (266)
T ss_dssp EETTCSEEEEEETTTTEEE----EEEEC--------------C-SSSCCEEEECSSSEEEECSSSEEEEECTTT-CCEEE
T ss_pred EEecCCEEEEEECCCCcEE----EEEEC--------------C-CCCeEEEEECCCEEEEECCCCeEEEEECCC-CcEEE
Confidence 4447799999999887654 22222 0 0112346667887776655 8999999987 67676
Q ss_pred EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 284 TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.+.......+ +...+.+.|. +|+..+....++.|.+.|..++
T Consensus 141 ~I~Vg~~~~p----------~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 141 KHNVKYNGHR----------VIRLNELEYI-NGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp EEECEETTEE----------CCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred EEEECCCCcc----------cccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence 6664332110 0001567777 6755445546789999999987
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.70 E-value=3e-05 Score=75.96 Aligned_cols=196 Identities=12% Similarity=0.086 Sum_probs=111.1
Q ss_pred EEeecCCCCEEEEE-cCC-------------------cEEEEeCCCCceeeeeeecCCCCCCc--cCCCeeEEEEecCCC
Q 014644 143 SISNNSDCETFVSA-DDL-------------------RINLWNLEISDQCFNIVDMKPSNMDD--LTEVITSAEFHPIYC 200 (421)
Q Consensus 143 ~l~~~~~~~~l~s~-~d~-------------------~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~ 200 (421)
.+++.|+..+++.+ .++ .|..+|.+++....+ +...+..... ...++.......+|
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~-~~~~~~d~wd~~~~~~~~l~d~~~~G- 316 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH-YQTTPGDAWDYTATQHMILAELPIDG- 316 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE-EESSTTCCSCCCCCSCEEEEEEEETT-
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe-eecCCcccccccCCCCcEEEeeccCC-
Confidence 56788888888887 665 399999995444443 3211110000 11222222333355
Q ss_pred C---eEEEEEcCCeEEEEECCcccccccchh---hhcccccc---------------CCCcc--ccccc--ccceeEEEE
Q 014644 201 N---LLAYSSSRGFVRLVDMRQSALCDHSAR---ILRDAAES---------------HGSKS--FFTEI--IASISDIKF 255 (421)
Q Consensus 201 ~---~l~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~h~~~---------------~~~~~--~~~~~--~~~v~~~~~ 255 (421)
+ .++.++.+|.++++|..+++.+..... .+..+... +.... ..... ...-..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 4 788899999999999999876411000 01100000 00000 00000 001224788
Q ss_pred cCCCCEEEEec----------------------------------------------CCeEEEEECCCCCcceeEEeecc
Q 014644 256 ANDGQHLLSRD----------------------------------------------YMNLKLWDIRMDSTPVATFKIHE 289 (421)
Q Consensus 256 s~~~~~l~~~~----------------------------------------------~~~i~i~d~~~~~~~~~~~~~~~ 289 (421)
+|+..++++.. ++.|+.||+.+ ++.+..+..+.
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~ 475 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT 475 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC
Confidence 88877666531 16689999987 88777766554
Q ss_pred CcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe-cCCCCccceeeecC
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE-AGKNENRKPILQAA 358 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 358 (421)
.. ....+...+.+++.|+.||.|+.||.+++ +++-.++ ++......+.+..+
T Consensus 476 ~~----------------~~g~~~tagglvf~gt~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 476 IF----------------NGGTLSTAGNLVFEGSADGRVIAYAADTG-EKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp SC----------------CCCEEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEEET
T ss_pred Cc----------------cCccceECCCEEEEECCCCcEEEEECCCC-ccceeeeCCCCcccCceEEEEC
Confidence 32 23355567788999999999999999998 4444444 33333345566554
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=6.3e-06 Score=74.52 Aligned_cols=158 Identities=10% Similarity=0.094 Sum_probs=100.6
Q ss_pred eec--CCCCEEEE-E-cCCcEEEEeCCCCc---eeeeeeecCCCCCC-c-cCCCeeEEEEecCCCCeEEEEEcC------
Q 014644 145 SNN--SDCETFVS-A-DDLRINLWNLEISD---QCFNIVDMKPSNMD-D-LTEVITSAEFHPIYCNLLAYSSSR------ 209 (421)
Q Consensus 145 ~~~--~~~~~l~s-~-~d~~i~lwd~~~~~---~~~~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~~l~s~~~d------ 209 (421)
.++ +++++|+. + .+++|.++|+.+.. +..++++ +.++. . .......+...|+| +++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie--~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~ 163 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIE--PEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGP 163 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEEC--HHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSC
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeec--hhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCC
Confidence 346 78888777 5 89999999997332 3444431 00010 0 01134556788997 55565555
Q ss_pred CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--------------------CCe
Q 014644 210 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--------------------YMN 269 (421)
Q Consensus 210 ~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------------------~~~ 269 (421)
+.|.++|..+.+.. ..+.. ... ...--..+.|+|+++.+++.. ..+
T Consensus 164 g~v~vlD~~T~~v~----~~~~~-~~~---------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~ 229 (462)
T 2ece_A 164 GGILMLDHYSFEPL----GKWEI-DRG---------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNR 229 (462)
T ss_dssp CEEEEECTTTCCEE----EECCS-BCT---------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCE
T ss_pred CeEEEEECCCCeEE----EEEcc-CCC---------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCE
Confidence 78999999987654 33332 000 012234688899999888874 389
Q ss_pred EEEEECCCCCcceeEEeecc-CcccccccccCCCcceeeeEEE--EcCCCCEEEEeeC------CCeEEEEecCC
Q 014644 270 LKLWDIRMDSTPVATFKIHE-HLRPKLCDLYNNDSIFDKFECS--VSGDGLHFATGSY------SNLLRIFSHGV 335 (421)
Q Consensus 270 i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~sp~~~~l~~~s~------dg~i~iwd~~~ 335 (421)
|.+||+.+ ++.+.++.... +..+ ..+. |+|++++++++++ +++|.+|..+.
T Consensus 230 V~v~D~~~-~k~~~tI~vg~~g~~P--------------~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 230 IHFWDLRK-RKRIHSLTLGEENRMA--------------LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp EEEEETTT-TEEEEEEESCTTEEEE--------------EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred EEEEECCC-CcEeeEEecCCCCCcc--------------ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 99999986 77777776542 1110 3444 4999999887774 56888887764
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.69 E-value=2.5e-05 Score=76.55 Aligned_cols=332 Identities=9% Similarity=-0.038 Sum_probs=162.7
Q ss_pred CCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccce-eeccCCCCceeeeecccccccceeEEeecccc
Q 014644 47 GSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNF-MNEHNPPSFAHGYHLEWTENMATKIANVGNSV 125 (421)
Q Consensus 47 ~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 125 (421)
+..+++++.++.|.-+|..+++..-............. ..+..+ ...... .. .+..+. .++.+..+|..++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~---~~~~~~~~~~~~~-~g-~v~v~~--~dg~l~AlDa~TG- 141 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGE---ACCDAVNRGVAVW-KG-KVYVGV--LDGRLEAIDAKTG- 141 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGG---CTTCSCCCCCEEE-TT-EEEEEC--TTSEEEEEETTTC-
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcccccc---ccccCCCCccEEE-CC-EEEEEc--cCCEEEEEECCCC-
Confidence 56678888899999999999884433322211100000 000000 000000 01 111111 1345566666665
Q ss_pred eeeeeeeecCC-CCcceEEEeecC---CCCEEEEEc------CCcEEEEeCCCCceeeeeeecCCCC-C-----------
Q 014644 126 HARCQKVYPHA-HDFNINSISNNS---DCETFVSAD------DLRINLWNLEISDQCFNIVDMKPSN-M----------- 183 (421)
Q Consensus 126 ~~~~~~~~~~~-h~~~v~~l~~~~---~~~~l~s~~------d~~i~lwd~~~~~~~~~~~~~~~~~-~----------- 183 (421)
+.+..+... +......+..+| ++..++.+. ++.|..||.+++....+.. ..+.. .
T Consensus 142 --~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~-~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 142 --QRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY-TVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp --CEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE-SSCCCTTSCCCSHHHHHH
T ss_pred --CEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec-ccCCCccccccccccccc
Confidence 444444221 211111222233 454444322 6899999998554444432 11100 0
Q ss_pred ----C--------ccCCCeeEEEEecCCCCeEEEEEcCCe-------------------EEEEECCcccccccchhhhcc
Q 014644 184 ----D--------DLTEVITSAEFHPIYCNLLAYSSSRGF-------------------VRLVDMRQSALCDHSARILRD 232 (421)
Q Consensus 184 ----~--------~~~~~v~~~~~~p~~~~~l~s~~~d~~-------------------v~iwd~~~~~~~~~~~~~~~~ 232 (421)
. ++...-..++++|+. .+++.++.++. |..+|..+++..-.. ..
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~----~~ 293 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHY----QT 293 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEE----ES
T ss_pred ccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEee----ec
Confidence 0 111112367889987 88888887764 999999998754211 11
Q ss_pred ccccCCCcccccccccceeEEEEcCCCC---EEEEecC-CeEEEEECCCCCcceeEEeeccC-ccc--------------
Q 014644 233 AAESHGSKSFFTEIIASISDIKFANDGQ---HLLSRDY-MNLKLWDIRMDSTPVATFKIHEH-LRP-------------- 293 (421)
Q Consensus 233 h~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~-~~~-------------- 293 (421)
.+.....+. ....+.......+|+ .++.++. |.++++|.++ ++++........ ...
T Consensus 294 ---~~~d~wd~~-~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~ 368 (689)
T 1yiq_A 294 ---TPGDAWDYT-ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEE 368 (689)
T ss_dssp ---STTCCSCCC-CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHH
T ss_pred ---CCccccccc-CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchh
Confidence 000000000 011122222223565 6777766 9999999987 877644332110 000
Q ss_pred -----------ccccccCCCcceeeeEEEEcCCCCEEEEeeC--------------------------------------
Q 014644 294 -----------KLCDLYNNDSIFDKFECSVSGDGLHFATGSY-------------------------------------- 324 (421)
Q Consensus 294 -----------~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~-------------------------------------- 324 (421)
.+++...-... ...++++|+..++++.+.
T Consensus 369 ~~~~~~~~~~~~~~p~~~Gg~~--w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~ 446 (689)
T 1yiq_A 369 NAAYWKNGKRNLVTPAFWGAHD--WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGL 446 (689)
T ss_dssp HHCTTTSSSCEEESSCTTCSSC--SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHH
T ss_pred hccccCCCCeeEeCCCcccccC--CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccC
Confidence 00000000000 134789998887776532
Q ss_pred -------CCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC--CCCCcccccc-ccc
Q 014644 325 -------SNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSY-NLS 393 (421)
Q Consensus 325 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~-~~~ 393 (421)
+|.|+.||+.++ +..-.+..+.. ...-.+... ..+++.|+.|+. +.| ..++.+.... +..
T Consensus 447 ~~~~~~~~g~l~A~D~~tG-~~~W~~~~~~~-~~~g~~~ta-------gglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 447 LEMAKSWSGKLIAWDPVKQ-QAAWEVPYVTI-FNGGTLSTA-------GNLVFEGSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp HHHHTTCEEEEEEEETTTT-EEEEEEEESSS-CCCCEEEET-------TTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCCCCcceeEEEEECCCC-CeEeEccCCCC-ccCccceEC-------CCEEEEECCCCcEEEEECCCCccceeeeCCCC
Confidence 378999999988 33333333332 222233333 237888888888 888 3455444332 222
Q ss_pred cCeEEEEEccCCCeEEE
Q 014644 394 SKLLHLAWHPTTNLIAC 410 (421)
Q Consensus 394 ~~v~~~~~spd~~~la~ 410 (421)
....-+.|..+|+..++
T Consensus 518 ~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCceEEEECCEEEEE
Confidence 22234677889876543
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.67 E-value=1.4e-05 Score=67.64 Aligned_cols=158 Identities=7% Similarity=-0.049 Sum_probs=94.5
Q ss_pred CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhh
Q 014644 151 ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARI 229 (421)
Q Consensus 151 ~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 229 (421)
+..++. .++.+.++|.. ..+.+..+.. + .. ....+++++ ..++.+..++.|.++|..+.+.. ..
T Consensus 77 ~lyv~t~~~~~v~viD~~-t~~v~~~i~~------g-~~--~g~glt~Dg-~~l~vs~gs~~l~viD~~t~~v~----~~ 141 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRR-TLSNIKNFTH------Q-MK--DGWGLATDG-KILYGSDGTSILYEIDPHTFKLI----KK 141 (266)
T ss_dssp EEEEEETTCSEEEEEETT-TTEEEEEEEC------C-SS--SCCEEEECS-SSEEEECSSSEEEEECTTTCCEE----EE
T ss_pred EEEEEEecCCEEEEEECC-CCcEEEEEEC------C-CC--CeEEEEECC-CEEEEECCCCeEEEEECCCCcEE----EE
Confidence 344445 89999999998 5666665531 1 01 123366788 66666667899999999886543 22
Q ss_pred hccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccc-cccccCCCcceee
Q 014644 230 LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPK-LCDLYNNDSIFDK 307 (421)
Q Consensus 230 ~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 307 (421)
+.. ... ...-..++.+.|. +|+..+.... +.|.+.|..+ ++++..+......... .......+. .
T Consensus 142 I~V-g~~-------~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v---~ 208 (266)
T 2iwa_A 142 HNV-KYN-------GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDV---L 208 (266)
T ss_dssp EEC-EET-------TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCC---E
T ss_pred EEE-CCC-------CcccccceeEEEE-CCEEEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCc---e
Confidence 221 000 0001236678888 7755555544 8999999987 8888888643100000 000000001 1
Q ss_pred eEEEEcCCCCE-EEEeeCCCeEEEEecCCC
Q 014644 308 FECSVSGDGLH-FATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 308 ~~~~~sp~~~~-l~~~s~dg~i~iwd~~~~ 336 (421)
..++|+|+++. ++++...+.|+..++...
T Consensus 209 nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 209 NGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 68999999765 456667889988887754
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.66 E-value=6.3e-05 Score=64.42 Aligned_cols=174 Identities=11% Similarity=-0.004 Sum_probs=101.7
Q ss_pred cceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc---CCeEE
Q 014644 139 FNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS---RGFVR 213 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---d~~v~ 213 (421)
.....+++.+++..|.. . ..+.|.+++++ +....... .........++++|++ ..|+.+.. .+.|.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~-g~~~~~~~-------~~~~~~P~~i~vd~~~-g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMD-GTQRRVLF-------DTGLVNPRGIVTDPVR-GNLYWTDWNRDNPKIE 149 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE-------CSSCSSEEEEEEETTT-TEEEEEECCSSSCEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcC-CCCEEEEE-------ECCCCCccEEEEeeCC-CEEEEEECCCCCcEEE
Confidence 35678999987655555 4 67899999987 32222121 1112456899999976 55555543 36888
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCc
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHL 291 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~ 291 (421)
.+++..... ..+.. ........++++|++..|..+ .. +.|..+|+.. ............+
T Consensus 150 ~~~~dg~~~-----~~~~~------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~~~~P 211 (267)
T 1npe_A 150 TSHMDGTNR-----RILAQ------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-PGRRKVLEGLQYP 211 (267)
T ss_dssp EEETTSCCC-----EEEEC------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-EEEEEEEECCCSE
T ss_pred EEecCCCCc-----EEEEE------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-CceEEEecCCCCc
Confidence 888754221 11110 002357899999987777655 34 8999999863 3222222221111
Q ss_pred ccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCCCCceeEEecCC-CCccceeeecC
Q 014644 292 RPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVGSAGGITVEAGK-NENRKPILQAA 358 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~ 358 (421)
..++.. +..|+.+. ..+.|..+|..++ .....+.... .....+++.|+
T Consensus 212 ----------------~gi~~d--~~~lyva~~~~~~v~~~d~~~g-~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 212 ----------------FAVTSY--GKNLYYTDWKTNSVIAMDLAIS-KEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp ----------------EEEEEE--TTEEEEEETTTTEEEEEETTTT-EEEEEECCSSCCCCCCEEEECS
T ss_pred ----------------eEEEEe--CCEEEEEECCCCeEEEEeCCCC-CceEEEccccccccceeeecCc
Confidence 356554 44555444 5689999998877 4444444332 23456666665
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.62 E-value=2.3e-05 Score=76.65 Aligned_cols=196 Identities=9% Similarity=0.042 Sum_probs=110.6
Q ss_pred EEeecCCCCEEEEE-cCC-------------------cEEEEeCCCCceeeeeeecCCCCCC--ccCCCeeEEEEecCCC
Q 014644 143 SISNNSDCETFVSA-DDL-------------------RINLWNLEISDQCFNIVDMKPSNMD--DLTEVITSAEFHPIYC 200 (421)
Q Consensus 143 ~l~~~~~~~~l~s~-~d~-------------------~i~lwd~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~ 200 (421)
.+++.|++..++.+ .++ +|..+|.+++..... ++..+.... ........+....+|.
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~-~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH-YQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE-EESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE-EecCCCcccccccCCCcEEEecccCCc
Confidence 56788888888876 553 599999985444433 322111000 0011222233344552
Q ss_pred --CeEEEEEcCCeEEEEECCcccccccchh---hhccccccCCCc--------------ccccccc--cceeEEEEcCCC
Q 014644 201 --NLLAYSSSRGFVRLVDMRQSALCDHSAR---ILRDAAESHGSK--------------SFFTEII--ASISDIKFANDG 259 (421)
Q Consensus 201 --~~l~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~h~~~~~~~--------------~~~~~~~--~~v~~~~~s~~~ 259 (421)
..++.++.+|.|+++|..+++....... .+....+ ...+ ..+.... ..-..++++|++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d-~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD-KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC-TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC-CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 4688889999999999999875421100 0000000 0000 0000000 011367889987
Q ss_pred CEEEEec-------------------------------------------C-CeEEEEECCCCCcceeEEeeccCccccc
Q 014644 260 QHLLSRD-------------------------------------------Y-MNLKLWDIRMDSTPVATFKIHEHLRPKL 295 (421)
Q Consensus 260 ~~l~~~~-------------------------------------------~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 295 (421)
.++++.. . +.|..||+.+ ++.+..+......
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~~~---- 479 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEHVSPW---- 479 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEESSSC----
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCCCCCC----
Confidence 7776531 1 6799999987 8877766543321
Q ss_pred ccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe-cCCCCccceeeecC
Q 014644 296 CDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE-AGKNENRKPILQAA 358 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 358 (421)
.+..+..++..++.++.||.+++||..++ +.+..+. ++......+.+..+
T Consensus 480 ------------~~g~~~~~g~~v~~g~~dg~l~a~D~~tG-~~lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 480 ------------NGGTLTTAGNVVFQGTADGRLVAYHAATG-EKLWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp ------------CCCEEEETTTEEEEECTTSEEEEEETTTC-CEEEEEECSSCCCSCCEEEEET
T ss_pred ------------cCcceEeCCCEEEEECCCCcEEEEECCCC-ceeeeeeCCCCcccCCEEEEeC
Confidence 34456667788889999999999999998 4444443 33333344555444
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.57 E-value=3.9e-08 Score=88.95 Aligned_cols=142 Identities=7% Similarity=-0.053 Sum_probs=69.4
Q ss_pred CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccch
Q 014644 149 DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSA 227 (421)
Q Consensus 149 ~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 227 (421)
++..++++ .|+.|+.||..++....+.. . +.+.+..+.+++ ..+++++.|+.|+.||..+++...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~--------~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w--- 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK--------E--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLT--- 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE--------C--CCSCCCC------CCEEECTTTCCEEEC-----CCSE---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec--------C--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceee---
Confidence 46677887 99999999998444444331 1 334444455666 677777899999999998876431
Q ss_pred hhhccccccCCCcccccccccce-eEEEEcCCCCEEEEec-CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcce
Q 014644 228 RILRDAAESHGSKSFFTEIIASI-SDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIF 305 (421)
Q Consensus 228 ~~~~~h~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (421)
.+..+. ...+ ....+. ++..+++++ ++.++.||.++ ++.+..+..+..
T Consensus 74 -~~~~~~------------~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~~--------------- 123 (369)
T 2hz6_A 74 -KLPFTI------------PELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAFA--------------- 123 (369)
T ss_dssp -ECSCCH------------HHHHTTCSCC------CCCCEEEEEEEEECCC-----------------------------
T ss_pred -eeeccC------------ccccccCceEe-cCCEEEEEeCCCEEEEEECCC-CcEEEEecCCCc---------------
Confidence 111100 0001 011111 234555554 48999999987 877766654331
Q ss_pred eeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 306 DKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 306 ~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
..++|++..+++++.|+.|+.||..+++.
T Consensus 124 ----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 124 ----DSLSPSTSLLYLGRTEYTITMYDTKTREL 152 (369)
T ss_dssp -------------EEEEEEEEEEECCCSSSSSC
T ss_pred ----ccccccCCEEEEEecCCEEEEEECCCCCE
Confidence 23456888899999999999999998844
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.57 E-value=3.3e-05 Score=64.69 Aligned_cols=166 Identities=16% Similarity=0.139 Sum_probs=100.1
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCC--cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 204 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 204 (421)
+.++++......-...|.|+ ++.++.++ .+| .|+.+|++ +++..+.+.+. .........+++ ..|+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~-Tgkv~~~~~l~--------~~~FgeGit~~g-~~ly 100 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIE-SGKTLQQIELG--------KRYFGEGISDWK-DKIV 100 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTT-TCCEEEEEECC--------TTCCEEEEEEET-TEEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECC-CCcEEEEEecC--------CccceeEEEEeC-CEEE
Confidence 55666622222335788998 66666665 555 89999999 55555554321 223333333445 4444
Q ss_pred EEE-cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcce
Q 014644 205 YSS-SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPV 282 (421)
Q Consensus 205 s~~-~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~ 282 (421)
... .++.+.+||..+.+.. ..+.. .. ....+++|++.|+.++. +.|.++|..+ .+.+
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~----~ti~~--------------~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T-~~v~ 159 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQV----RSFNY--------------DG--EGWGLTHNDQYLIMSDGTPVLRFLDPES-LTPV 159 (262)
T ss_dssp EEESSSSEEEEEETTTCCEE----EEEEC--------------SS--CCCCEEECSSCEEECCSSSEEEEECTTT-CSEE
T ss_pred EEEeeCCEEEEEECccCcEE----EEEEC--------------CC--CceEEecCCCEEEEECCCCeEEEEcCCC-CeEE
Confidence 444 6889999999987654 22322 11 22334467777776654 8899999987 7777
Q ss_pred eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 283 ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
..+.......+ +..+..+.|. +|+..+..-.++.|.+.|..++
T Consensus 160 ~~I~V~~~g~~----------~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 160 RTITVTAHGEE----------LPELNELEWV-DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp EEEECEETTEE----------CCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC
T ss_pred EEEEeccCCcc----------ccccceeEEE-CCEEEEEEccCCeEEEEECCCC
Confidence 77665432110 0001346666 6765555546889999999887
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.55 E-value=9.8e-05 Score=63.18 Aligned_cols=157 Identities=6% Similarity=-0.080 Sum_probs=95.5
Q ss_pred cceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 139 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
..+..++|++++..|..+ ..+.|..++++ +......+ .........++++|++..++++-...+.|.+++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~-------~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~ 107 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLH-GGEPTTII-------RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAK 107 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESS-SCCCEEEE-------CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecC-CCCcEEEE-------ECCCCCccEEEEEecCCeEEEEECCCCEEEEEE
Confidence 357789999976655554 68899999997 33322222 112245789999997624444444668999999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec----CCeEEEEECCCCCcceeEEeeccCcc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD----YMNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
+...... ..... .......++++|++..|..+. .+.|..+++. +.....+......
T Consensus 108 ~~g~~~~----~~~~~-------------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~~~~~~~~~~~~- 167 (267)
T 1npe_A 108 MDGTQRR----VLFDT-------------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GTNRRILAQDNLG- 167 (267)
T ss_dssp TTSCSCE----EEECS-------------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SCCCEEEECTTCS-
T ss_pred cCCCCEE----EEEEC-------------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CCCcEEEEECCCC-
Confidence 8643211 11111 013568999999755554432 2578888875 3333333211100
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
....++++|++..|+.+. ..+.|.++|+...
T Consensus 168 -------------~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 168 -------------LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp -------------CEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred -------------CCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 016899999877665554 5689999998753
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.52 E-value=0.00094 Score=66.80 Aligned_cols=247 Identities=11% Similarity=0.061 Sum_probs=136.5
Q ss_pred CcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCC-CCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 138 DFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPS-NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
...|.++...++|.+.+...+ -|.+|+.. ........ ..+. ...-....|.++...++| . |..|+.++-|..|+
T Consensus 262 ~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~-~~~~~~~~-~~~~~~~~l~~~~i~~i~~D~~g-~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWIGTFN-DLNIYHEG-TDSFASYS-SNPVENGSLSQRSVRSIFMDSQG-G-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSCEEEEESS-CEEEEETT-TTEEEEEC-CCTTSTTSCSSSCEEEEEECTTS-C-EEEEESSSCEEEEC
T ss_pred CCeEEEEEEcCCCCEEEEeCC-hhheEcCC-CCeEEEEe-cCCCCCCCCCCCcEEEEEEeCCc-C-EEEEECCCCeEEeC
Confidence 356899999988987776654 58889987 33332221 1100 001134679999999887 4 55577777788888
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCccc-cc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRP-KL 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~-~~ 295 (421)
...+... .+.. .+. .. .-....|.++...++|.+.+....+.|..|+..+ +. ...+........ .+
T Consensus 337 ~~~~~~~-----~~~~---~~~-~~--~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~l 403 (795)
T 4a2l_A 337 PIRNRFK-----NIRN---IPY-KN--SLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPIT-QR-FTSYTLQEDESARGI 403 (795)
T ss_dssp GGGGSSE-----EECC---CTT-SS--SCSCSSEEEEEECTTSCEEEEESSSCEEEECTTT-CC-EEEECCC------CC
T ss_pred CCcccce-----EEcC---CCC-CC--CCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCC-Cc-EEEEecCCCCcccCC
Confidence 7654321 1110 000 00 0013568999999888766654446799999864 33 333321110000 00
Q ss_pred ccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec-----CCCCccceeeecCCcccccccceee
Q 014644 296 CDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA-----GKNENRKPILQAAPRARRSSLSNLT 370 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~ 370 (421)
..+ .|.+++..++|+.|..|+.++-|..+|..++. ...+.. ....+.++...++ +. |.
T Consensus 404 ----~~~---~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~--g~------lw 466 (795)
T 4a2l_A 404 ----GSN---NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VENFNQRNSQLVNENVYAILPDGE--GN------LW 466 (795)
T ss_dssp ----SCS---CEEEEEEETTTTEEEEEETTTEEEEEETTTCC--EEEECTTTSCCSCSCEEEEEECSS--SC------EE
T ss_pred ----CCc---cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCC--CC------EE
Confidence 011 12688888888856667877889999987652 222221 1233444443322 33 33
Q ss_pred eecccCcccCCC-CCcccccc------c-cccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 371 RGLYRQAHENSS-SGHHELSY------N-LSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 371 ~g~~d~~~iw~~-~~~~~~~~------~-~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
.|...|...++. .+...... . ....|.++...++|++.+... ++|+.|+
T Consensus 467 igt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~ 523 (795)
T 4a2l_A 467 LGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFK 523 (795)
T ss_dssp EEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEE
T ss_pred EEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEe
Confidence 333345444421 11111110 1 135688999999998877666 7788775
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.51 E-value=6e-06 Score=73.13 Aligned_cols=21 Identities=14% Similarity=0.245 Sum_probs=14.8
Q ss_pred CCeEEEEeCCCcEEEeecCCce
Q 014644 47 GSMFILSTNDKTIKLWKVRDQK 68 (421)
Q Consensus 47 ~~~l~t~s~d~~v~lwd~~~~~ 68 (421)
+..+..++.++.|..|| .+++
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~ 50 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGS 50 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSC
T ss_pred CCeEEEEcCCCEEEEEC-CCCc
Confidence 34566677788888888 6665
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.51 E-value=7.5e-05 Score=72.98 Aligned_cols=199 Identities=10% Similarity=-0.046 Sum_probs=107.2
Q ss_pred eEEEEecCCCCeEEEEEcCC-------------------eEEEEECCcccccccchhhhccccccCCCccccccccccee
Q 014644 191 TSAEFHPIYCNLLAYSSSRG-------------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASIS 251 (421)
Q Consensus 191 ~~~~~~p~~~~~l~s~~~d~-------------------~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~ 251 (421)
..++++|++ .+++.++.++ .|..+|..+++..-.. .. .+.....+.. .....
T Consensus 246 ~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~----~~---~~~d~wd~~~-~~~p~ 316 (677)
T 1kb0_A 246 DSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHY----QE---TPGDNWDYTS-TQPMI 316 (677)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE----ES---STTCCSCCCC-CSCCE
T ss_pred cceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEE----ec---CCCccccccc-CCCcE
Confidence 467889988 8888877664 5999999988754211 11 0000000000 11222
Q ss_pred EEEEcCCC---CEEEEecC-CeEEEEECCCCCcceeEEeeccCc-cc---------------------ccccccCCCcce
Q 014644 252 DIKFANDG---QHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHL-RP---------------------KLCDLYNNDSIF 305 (421)
Q Consensus 252 ~~~~s~~~---~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~-~~---------------------~~~~~~~~~~~~ 305 (421)
-+....+| +.++.++. |.++++|.++ ++++..+...... .. ..++...-...+
T Consensus 317 l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w 395 (677)
T 1kb0_A 317 LADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNW 395 (677)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCS
T ss_pred EEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCC
Confidence 23334477 56777766 9999999987 8877665432110 00 000000000000
Q ss_pred eeeEEEEcCCCCEEEEeeC-------------------------------------------CCeEEEEecCCCCCceeE
Q 014644 306 DKFECSVSGDGLHFATGSY-------------------------------------------SNLLRIFSHGVGSAGGIT 342 (421)
Q Consensus 306 ~~~~~~~sp~~~~l~~~s~-------------------------------------------dg~i~iwd~~~~~~~~~~ 342 (421)
..++++|+..++++... .|.|..||+.+++. .-.
T Consensus 396 --~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~-~W~ 472 (677)
T 1kb0_A 396 --HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA-AWS 472 (677)
T ss_dssp --SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE-EEE
T ss_pred --CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE-Eee
Confidence 26789999888877543 27899999998833 322
Q ss_pred EecCCCCccceeeecCCcccccccceeeeecccCc-ccC--CCCCcccccc-ccccCeEEEEEccCCCeEEE
Q 014644 343 VEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN--SSSGHHELSY-NLSSKLLHLAWHPTTNLIAC 410 (421)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw--~~~~~~~~~~-~~~~~v~~~~~spd~~~la~ 410 (421)
.. +..+.....+... ...++.++.++. +.| ..++.+.... +....-.-+.+.++|+.+++
T Consensus 473 ~~-~~~~~~~g~~~~~-------g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 473 VE-HVSPWNGGTLTTA-------GNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EE-ESSSCCCCEEEET-------TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cC-CCCCCcCcceEeC-------CCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 22 2223333334433 226777888888 888 3344433322 22222234567788876544
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.44 E-value=1.2e-05 Score=71.94 Aligned_cols=79 Identities=9% Similarity=-0.007 Sum_probs=57.7
Q ss_pred EEEecCCCCeEEEEEc---------CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCE-E
Q 014644 193 AEFHPIYCNLLAYSSS---------RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH-L 262 (421)
Q Consensus 193 ~~~~p~~~~~l~s~~~---------d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l 262 (421)
++++|++ +.++.+.. ++.+.++|+.+.+.. ..+.. ......++|+|||++ +
T Consensus 269 v~~s~dg-~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv----~~i~v--------------g~~p~gi~~s~Dg~~l~ 329 (368)
T 1mda_H 269 VAKLKNT-DGIMILTVEHSRSCLAAAENTSSVTASVGQTS----GPISN--------------GHDSDAIIAAQDGASDN 329 (368)
T ss_dssp EEEETTT-TEEEEEEEECSSCTTSCEEEEEEEESSSCCEE----ECCEE--------------EEEECEEEECCSSSCEE
T ss_pred eEEcCCC-CEEEEEeccccCcccccCCCEEEEECCCCeEE----EEEEC--------------CCCcceEEECCCCCEEE
Confidence 6899999 66665433 235669999987654 34443 236889999999984 4
Q ss_pred EEec--CCeEEEEECCCCCcceeEEeeccCc
Q 014644 263 LSRD--YMNLKLWDIRMDSTPVATFKIHEHL 291 (421)
Q Consensus 263 ~~~~--~~~i~i~d~~~~~~~~~~~~~~~~~ 291 (421)
++.. ++.|.++|+.+ .+.+..+.....+
T Consensus 330 va~~~~~~~VsVID~~t-~kvv~~I~vg~~P 359 (368)
T 1mda_H 330 YANSAGTEVLDIYDAAS-DQDQSSVELDKGP 359 (368)
T ss_dssp EEEETTTTEEEEEESSS-CEEEEECCCCSCC
T ss_pred EEccCCCCeEEEEECCC-CcEEEEEECCCCC
Confidence 5554 49999999997 8888888766655
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.44 E-value=3.7e-05 Score=64.36 Aligned_cols=206 Identities=12% Similarity=0.103 Sum_probs=118.0
Q ss_pred cccccccccccc--EEEEEEEEcCCCCeEEEEeCCC--cEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCC
Q 014644 24 FDYLKSLEIEEK--INRVRWCAAPNGSMFILSTNDK--TIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNP 99 (421)
Q Consensus 24 ~~~~~~~~h~~~--V~~v~~~~~~~~~~l~t~s~d~--~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 99 (421)
++.++.+.|... ...+.| + ++.++.+++.+| .|++.|+++++.......
T Consensus 31 ~~vv~~~phd~~~ftqGL~~--~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l------------------------ 83 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFY--R-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL------------------------ 83 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEE--E-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC------------------------
T ss_pred eEEEEEecCCCCcccceEEE--E-CCEEEEECCCCCCceEEEEECCCCcEEEEEec------------------------
Confidence 445555666543 367888 4 567777888776 899999999873322110
Q ss_pred CCceeeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeee
Q 014644 100 PSFAHGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVD 177 (421)
Q Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~ 177 (421)
... .--..++. +++.|.. . .++.+.+||.+ +.+.+..+.
T Consensus 84 -----------------------------------~~~-~FgeGit~--~g~~ly~ltw~~~~v~v~D~~-t~~~~~ti~ 124 (262)
T 3nol_A 84 -----------------------------------GKR-YFGEGISD--WKDKIVGLTWKNGLGFVWNIR-NLRQVRSFN 124 (262)
T ss_dssp -----------------------------------CTT-CCEEEEEE--ETTEEEEEESSSSEEEEEETT-TCCEEEEEE
T ss_pred -----------------------------------CCc-cceeEEEE--eCCEEEEEEeeCCEEEEEECc-cCcEEEEEE
Confidence 000 00111222 2334444 4 79999999998 566666653
Q ss_pred cCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC
Q 014644 178 MKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN 257 (421)
Q Consensus 178 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~ 257 (421)
. .+ ....+++++ ..|+.+..++.|.++|..+.+.. ..+.. .... ..-..++.+.|.
T Consensus 125 ~-----~~-----eG~glt~dg-~~L~~SdGs~~i~~iDp~T~~v~----~~I~V-~~~g-------~~~~~lNELe~~- 180 (262)
T 3nol_A 125 Y-----DG-----EGWGLTHND-QYLIMSDGTPVLRFLDPESLTPV----RTITV-TAHG-------EELPELNELEWV- 180 (262)
T ss_dssp C-----SS-----CCCCEEECS-SCEEECCSSSEEEEECTTTCSEE----EEEEC-EETT-------EECCCEEEEEEE-
T ss_pred C-----CC-----CceEEecCC-CEEEEECCCCeEEEEcCCCCeEE----EEEEe-ccCC-------ccccccceeEEE-
Confidence 2 11 223344677 66666666788999999886644 22221 0000 001234567776
Q ss_pred CCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccc-cccCCCcceeeeEEEEcCCCCEEEEeeC
Q 014644 258 DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC-DLYNNDSIFDKFECSVSGDGLHFATGSY 324 (421)
Q Consensus 258 ~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp~~~~l~~~s~ 324 (421)
+|+..+..-. +.|.+.|.++ ++++..+....-.. ... .....+. ...++|+|+++.|+..+.
T Consensus 181 ~G~lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~-~~~~~~~~~~v---lNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPET-GKVTGIIDLNGILA-EAGPLPSPIDV---LNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTT-CBEEEEEECTTGGG-GSCSCCSSCCC---EEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEccCCeEEEEECCC-CcEEEEEECCcCcc-ccccccCcCCc---eEEEEEcCCCCEEEEECC
Confidence 6765555434 8999999987 88888876532110 000 0000111 178999998777666554
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.44 E-value=2.2e-05 Score=73.52 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=94.7
Q ss_pred CCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE-e-cCCCCeEEEEE----------------
Q 014644 148 SDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF-H-PIYCNLLAYSS---------------- 207 (421)
Q Consensus 148 ~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-p~~~~~l~s~~---------------- 207 (421)
+||++|... .+..|.+.|++ ..++.+++.+ . .......+++ + |++ .++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~-t~~~~~ii~i-----p-~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCD-VMKCDAILEI-----P-NAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETT-TTEEEEEEEC-----S-SCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCG
T ss_pred cCCCEEEEEcCCCCEEEEEECC-CceEeeEEeC-----C-CCCCCcceeeeecCCC-cEEEEecccccccCCCCcccccc
Confidence 388888886 57789999999 6676765532 2 1234678887 5 898 7777774
Q ss_pred --cCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-C----------------
Q 014644 208 --SRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-M---------------- 268 (421)
Q Consensus 208 --~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~---------------- 268 (421)
.++.+.+.|..+.+.. ..+.. ......++++|+|+++++.+. .
T Consensus 171 ~~~~~~vtvID~~t~~v~----~qI~V--------------gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~ 232 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVA----WQVLV--------------SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDH 232 (595)
T ss_dssp GGEEEEEEEEETTTTEEE----EEEEE--------------SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEE
T ss_pred cccCceEEEEECCCCeEE----EEEEe--------------CCCccceEECCCCCEEEEEecCcccCcchhhccccccce
Confidence 3457888998876543 22221 123467889999998887642 1
Q ss_pred ----------------------eEEEEECCCC-Ccc-eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-
Q 014644 269 ----------------------NLKLWDIRMD-STP-VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS- 323 (421)
Q Consensus 269 ----------------------~i~i~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s- 323 (421)
.|.+.|.++. ++. +..+.....+ .++.++|||+++++++
T Consensus 233 v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P----------------hGv~~sPDGk~v~V~~~ 296 (595)
T 1fwx_A 233 IVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP----------------HGCNMAPDKKHLCVAGK 296 (595)
T ss_dssp EEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC----------------CCEEECTTSSEEEEECT
T ss_pred EEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc----------------eEEEEcCCCCEEEEeCC
Confidence 2444444420 112 2333322222 5899999999877665
Q ss_pred CCCeEEEEecCCC
Q 014644 324 YSNLLRIFSHGVG 336 (421)
Q Consensus 324 ~dg~i~iwd~~~~ 336 (421)
.+.+|.++|+.+.
T Consensus 297 ~s~~VsVid~~~~ 309 (595)
T 1fwx_A 297 LSPTVTVLDVTRF 309 (595)
T ss_dssp TSSBEEEEEGGGH
T ss_pred CCCeEEEEECccc
Confidence 5889999999854
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=4.6e-05 Score=75.61 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=73.5
Q ss_pred CCCc-ceEEEeec-CCCCEEEEE-c-CC----cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE
Q 014644 136 AHDF-NINSISNN-SDCETFVSA-D-DL----RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS 207 (421)
Q Consensus 136 ~h~~-~v~~l~~~-~~~~~l~s~-~-d~----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 207 (421)
+|.- .+...+|| |||++||.+ + +| +|+++|+.++.+.+.. .+. ....+++|+||+ +.|+...
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~------~~~---~~~~~~~WspDg-~~l~y~~ 239 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD------KVS---GTNGEIVWGPDH-TSLFYVT 239 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC------CEE---EECSCCEECSST-TEEEEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc------ccc---CceeeEEEecCC-CEEEEEE
Confidence 4443 67889999 999999875 2 33 4999999843032110 011 124578999999 7777766
Q ss_pred cC-----CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec---C-CeEEEEECCC
Q 014644 208 SR-----GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD---Y-MNLKLWDIRM 277 (421)
Q Consensus 208 ~d-----~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~-~~i~i~d~~~ 277 (421)
.| ..|.++++.++...+. .++.. ........+.|+|||++|+... . ..|+++|+.+
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~--lv~~~------------~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDV--CLYEE------------HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCE--EEEEC------------CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred ECCCCCCCEEEEEECCCCchhcE--EEEec------------CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 65 2577778766432111 11111 0022356789999999988542 2 5788899875
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.35 E-value=7.4e-05 Score=62.57 Aligned_cols=166 Identities=15% Similarity=0.038 Sum_probs=98.8
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
+.++++...-..-...|.|+ ++.++.+. .++.|+++|++ +++..+.+ +. .........+++..+.+..
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~-Tgkv~~~~-l~--------~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLE-SAQPVWME-RL--------GNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSS-CSSCSEEE-EC--------TTCCEEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECC-CCcEEeEE-CC--------CCcceeEEEEeCCEEEEEE
Confidence 44555522222334788887 35555565 88889999999 45444433 21 1223322334452444445
Q ss_pred EcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEE
Q 014644 207 SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 207 ~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
-.++.+.+||..+.+.. ..+.. ...-..++ +|++.|+.++. +.|.++|..+ .+.+.++
T Consensus 113 w~~~~v~V~D~~Tl~~~----~ti~~--------------~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I 171 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRE----RTTRY--------------SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDG-FALVGAV 171 (268)
T ss_dssp SSSCEEEEEETTTTEEE----EEEEC--------------SSCCCCEE--EETTEEEEECSSSEEEEECTTT-CCEEEEE
T ss_pred ccCCEEEEEECCcCcEE----EEEeC--------------CCceeEEe--cCCCEEEEECCCCEEEEEcCCC-CeEEEEE
Confidence 57899999999987654 22222 11113333 56777776654 8999999987 7777777
Q ss_pred eeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 286 KIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.......+ +.....+.|. +|+..+..-.++.|.+.|..++
T Consensus 172 ~V~~~g~~----------v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG 211 (268)
T 3nok_A 172 QVKLRGQP----------VELINELECA-NGVIYANIWHSSDVLEIDPATG 211 (268)
T ss_dssp ECEETTEE----------CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC
T ss_pred EeCCCCcc----------cccccccEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence 65432211 0011456666 7765544446789999999887
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.33 E-value=0.0013 Score=57.50 Aligned_cols=162 Identities=10% Similarity=0.076 Sum_probs=87.6
Q ss_pred ceEEEeecCCCCEEEEE-cCC--cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 140 NINSISNNSDCETFVSA-DDL--RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
.+..+++.++|+++++. ... .|..++.. .++....... . .......++..+++ ..+++-..++.|..+|
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~-~g~~~~~~~~-----~-~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKS-DGTVETLLTL-----P-DAIFLNGITPLSDT-QYLTADSYRGAIWLID 144 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECT-TSCEEEEEEC-----T-TCSCEEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCC-CCeEEEEEeC-----C-CccccCcccccCCC-cEEEEECCCCeEEEEe
Confidence 47789999999977765 332 46666765 3443333221 1 11223455555554 4444444688899999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcc--eeEEeeccCcc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTP--VATFKIHEHLR 292 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~--~~~~~~~~~~~ 292 (421)
...+.... ..... ..... .....-...+.+ +|++++|..+. . +.|..|++...++. ...+.....+
T Consensus 145 ~~~~~~~v---~~~~~-~~~~~---~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P- 214 (306)
T 2p4o_A 145 VVQPSGSI---WLEHP-MLARS---NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI- 214 (306)
T ss_dssp TTTTEEEE---EEECG-GGSCS---STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCC-
T ss_pred CCCCcEeE---EEECC-ccccc---cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCC-
Confidence 76532100 00000 00000 000001234455 78888776653 4 89999998642221 1112111111
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
..++++++|++.++....+.|.+++..
T Consensus 215 ---------------~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 215 ---------------DDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp ---------------SSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred ---------------CCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 478999999887777778889998864
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.33 E-value=0.00011 Score=64.77 Aligned_cols=211 Identities=10% Similarity=0.027 Sum_probs=121.5
Q ss_pred CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchh
Q 014644 150 CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSAR 228 (421)
Q Consensus 150 ~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 228 (421)
+..|..+ .++.|..+|.. +....... .....+.++...+++ . ++.++.++.|..+|.. ++.. .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~--------~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~----~ 170 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFK--------TKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEK----W 170 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEE--------CSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEE----E
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEc--------CCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEe----E
Confidence 3345555 88999999987 44433321 123345666777776 4 6667788999999987 5432 1
Q ss_pred hhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeee
Q 014644 229 ILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKF 308 (421)
Q Consensus 229 ~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (421)
.+.. ....+.++...++|.+.+.. +.|..+| .+ ++....+......+ .
T Consensus 171 ~~~~-------------~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~-g~~~~~~~~~~~~~---------------~ 218 (330)
T 3hxj_A 171 RFKT-------------NDAITSAASIGKDGTIYFGS--DKVYAIN-PD-GTEKWNFYAGYWTV---------------T 218 (330)
T ss_dssp EEEC-------------SSCCCSCCEECTTCCEEEES--SSEEEEC-TT-SCEEEEECCSSCCC---------------S
T ss_pred EEec-------------CCCceeeeEEcCCCEEEEEe--CEEEEEC-CC-CcEEEEEccCCcce---------------e
Confidence 1111 12356677777788766555 7899999 44 66555544332222 5
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccCCCC-Ccc
Q 014644 309 ECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HENSSS-GHH 386 (421)
Q Consensus 309 ~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw~~~-~~~ 386 (421)
++...++|. |..++.++.|..+|. ++ .....+.........+....+ + .|..+..++. ..++.. +..
T Consensus 219 ~~~~~~~g~-l~v~t~~~gl~~~~~-~g-~~~~~~~~~~~~~~~~~~~~~--g------~l~v~t~~ggl~~~d~~g~~~ 287 (330)
T 3hxj_A 219 RPAISEDGT-IYVTSLDGHLYAINP-DG-TEKWRFKTGKRIESSPVIGNT--D------TIYFGSYDGHLYAINPDGTEK 287 (330)
T ss_dssp CCEECTTSC-EEEEETTTEEEEECT-TS-CEEEEEECSSCCCSCCEECTT--S------CEEEECTTCEEEEECTTSCEE
T ss_pred ceEECCCCe-EEEEcCCCeEEEECC-CC-CEeEEeeCCCCccccceEcCC--C------eEEEecCCCCEEEECCCCcEE
Confidence 677888775 555777888888874 33 333333333333333443322 2 4666666654 444322 222
Q ss_pred ccccccccCeEEEEEccCCCeEEEecCCceEEE
Q 014644 387 ELSYNLSSKLLHLAWHPTTNLIACANGNSLFFH 419 (421)
Q Consensus 387 ~~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~ 419 (421)
.........+.++...+++.+.+.+.++.+++.
T Consensus 288 ~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 288 WNFETGSWIIATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp EEEECSSCCCSCCEECTTCCEEEECTTSCEEEE
T ss_pred EEEEcCCccccceEEcCCCEEEEEcCCCeEEEE
Confidence 222222345667777788887766556666654
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.32 E-value=0.00039 Score=61.22 Aligned_cols=163 Identities=11% Similarity=0.003 Sum_probs=97.1
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCC-------------CCCccCCCeeEEEEec-CCCCeE
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPS-------------NMDDLTEVITSAEFHP-IYCNLL 203 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~p-~~~~~l 203 (421)
....+++|.++++++.++ .++.|..|+.. ++.. ..+..... ........+.++++.+ ++ .|
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~-~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~l 94 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGP-NSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--QL 94 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCT-TTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--EE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCC-CCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCC--cE
Confidence 345678899999877777 88999999887 3322 22211000 0001123578899998 55 45
Q ss_pred EEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC---------------
Q 014644 204 AYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY--------------- 267 (421)
Q Consensus 204 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~--------------- 267 (421)
+.+...+.|..+|...+... .+.. .. . .........+++.+ +|++.++...
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~-----~~~~-~~-~------~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHAT-----QLAT-SV-D------GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEETTTEEEEECTTCEECE-----EEES-EE-T------TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred EEEECCCCEEEEeCCCCEEE-----Eecc-cC-C------CCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 55555566888887754321 1111 00 0 00013467899999 9987776421
Q ss_pred ---CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCCeEEEEecCC
Q 014644 268 ---MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSNLLRIFSHGV 335 (421)
Q Consensus 268 ---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg~i~iwd~~~ 335 (421)
+.|..+|..+ ++.......-..+ ..++++|+++.|+.+ +..+.|+.+++..
T Consensus 162 ~~~g~v~~~d~~~-~~~~~~~~~~~~p----------------~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 162 DKTGRLIKYDPST-KETTLLLKELHVP----------------GGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCCEEEEEEETTT-TEEEEEEEEESCC----------------CEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred CCCceEEEEeCCC-CEEEEeccCCccC----------------cceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 5688888754 4332222221221 589999999876655 5568999999875
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.31 E-value=0.00054 Score=56.82 Aligned_cols=167 Identities=15% Similarity=0.098 Sum_probs=98.3
Q ss_pred eeeeeecCCCCcceEEEeecCCCCEEEEE-cC--CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEE
Q 014644 128 RCQKVYPHAHDFNINSISNNSDCETFVSA-DD--LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLA 204 (421)
Q Consensus 128 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d--~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 204 (421)
+.++.+......-...|.|++ +.++.+. .+ ..|+.+|+. +++..+.+.+. .........+.+.++.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~-tgkv~~~~~l~--------~~~fgeGi~~~~~~ly~ 79 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLE-TGRILQRAEVP--------PPYFGAGIVAWRDRLIQ 79 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETT-TCCEEEEEECC--------TTCCEEEEEEETTEEEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECC-CCCEEEEEeCC--------CCcceeEEEEeCCEEEE
Confidence 555666222234467889986 5555554 43 599999999 56665554321 12222323333424444
Q ss_pred EEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCccee
Q 014644 205 YSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVA 283 (421)
Q Consensus 205 s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~ 283 (421)
..-.++.+.+||..+.+.. ..+.. ...-..+ .++++.|+.+.. +.|.++|..+ .+.+.
T Consensus 80 ltw~~~~v~v~D~~tl~~~----~ti~~--------------~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t-~~~~~ 138 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPR----ARFRY--------------PGEGWAL--TSDDSHLYMSDGTAVIRKLDPDT-LQQVG 138 (243)
T ss_dssp EESSSSEEEEEETTTTEEE----EEEEC--------------SSCCCEE--EECSSCEEEECSSSEEEEECTTT-CCEEE
T ss_pred EEeeCCEEEEEECCcCcEE----EEEeC--------------CCCceEE--eeCCCEEEEECCCCeEEEEeCCC-CeEEE
Confidence 4457899999999987654 22222 1111334 456776666544 8999999987 77777
Q ss_pred EEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 284 TFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
++.......+ +..+..+.+. +|+..+..-.+..|.+.|..++
T Consensus 139 ~I~V~~~g~~----------~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 139 SIKVTAGGRP----------LDNLNELEWV-NGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp EEECEETTEE----------CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTC
T ss_pred EEEEccCCcc----------cccceeeEEe-CCEEEEEECCCCeEEEEECCCC
Confidence 7665432110 0011355555 6665554446789999999988
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00063 Score=57.19 Aligned_cols=175 Identities=9% Similarity=0.078 Sum_probs=101.2
Q ss_pred CCCCcceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeE
Q 014644 135 HAHDFNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 212 (421)
Q Consensus 135 ~~h~~~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v 212 (421)
.+-.+.+..++|+|++..|++ . .++.|...|.. ++..+.+. +.+ ......+++.+++ .++++.-.++.+
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~v~~~i~-----l~g-~~D~EGIa~~~~g-~~~vs~E~~~~l 93 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GDLIRTIP-----LDF-VKDLETIEYIGDN-QFVISDERDYAI 93 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CCEEEEEE-----CSS-CSSEEEEEECSTT-EEEEEETTTTEE
T ss_pred CCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CCEEEEEe-----cCC-CCChHHeEEeCCC-EEEEEECCCCcE
Confidence 555668999999998776666 5 77788888876 55555542 122 2457889999887 666665577889
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECC--CCCcceeEEeecc
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIR--MDSTPVATFKIHE 289 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~--~~~~~~~~~~~~~ 289 (421)
.++++...... ..... ..-+. .....+.....++|+|.++.|.++.+ ....||.++ .....+..+....
T Consensus 94 ~~~~v~~~~~i----~~~~~-~~~~~---~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 94 YVISLTPNSEV----KILKK-IKIPL---QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp EEEEECTTCCE----EEEEE-EECCC---SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred EEEEcCCCCee----eeeee-ecccc---ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 99987764321 00111 00000 00112456789999999876666543 333444442 1122222221100
Q ss_pred CcccccccccCCCcceeeeEEEEcCC-CCEEEEeeCCCeEEEEecC
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGD-GLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~~s~dg~i~iwd~~ 334 (421)
.. ......+..+++++|. +++++.......+.++|.+
T Consensus 166 -~~-------~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 166 -LQ-------RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp -HH-------HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred -hc-------cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC
Confidence 00 0001123368999996 5555566667788888866
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.31 E-value=0.00047 Score=60.71 Aligned_cols=255 Identities=8% Similarity=-0.018 Sum_probs=131.5
Q ss_pred EEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCC--ccc----ccccccccceeeccCCC-Cceeeeec
Q 014644 36 INRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPF--VSS----ENTLLAEKNFMNEHNPP-SFAHGYHL 108 (421)
Q Consensus 36 V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~--v~~----~~~~~~~~~~~~~~~~~-~~~~~~~g 108 (421)
-.+++| +++++++.++..++.|..|+..++....+........ .+. ..+.........+.+.+ .+......
T Consensus 21 p~~i~~--d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTF--DSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCEEC--CTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred ceEEEE--cCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 356778 6788878888899999999988765444332110000 000 00000011222333332 22222111
Q ss_pred ccccccceeEEeecccceeeeeeeecCC-CCcceEEEeecC-CCCEEEEE-c-----------------CCcEEEEeCCC
Q 014644 109 EWTENMATKIANVGNSVHARCQKVYPHA-HDFNINSISNNS-DCETFVSA-D-----------------DLRINLWNLEI 168 (421)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~-~~~~l~s~-~-----------------d~~i~lwd~~~ 168 (421)
. ...+..++............. .+ .......+++.+ +|++.++. . ++.|..||..
T Consensus 99 ~---~~~i~~~d~~~g~~~~~~~~~-~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~- 173 (322)
T 2fp8_A 99 C---YYHLSVVGSEGGHATQLATSV-DGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS- 173 (322)
T ss_dssp T---TTEEEEECTTCEECEEEESEE-TTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-
T ss_pred C---CCCEEEEeCCCCEEEEecccC-CCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC-
Confidence 1 111233333222000011111 11 123467899999 99888774 3 2668888876
Q ss_pred CceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEEECCcccccccchhhhccccccCCCcccccccc
Q 014644 169 SDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEII 247 (421)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 247 (421)
.++..... ........++++|++ +.|+.+ ...+.|..|++...... ....+.. ..
T Consensus 174 ~~~~~~~~--------~~~~~p~gia~~~dg-~~lyv~d~~~~~I~~~~~~~~~~~--~~~~~~~-------------~~ 229 (322)
T 2fp8_A 174 TKETTLLL--------KELHVPGGAEVSADS-SFVLVAEFLSHQIVKYWLEGPKKG--TAEVLVK-------------IP 229 (322)
T ss_dssp TTEEEEEE--------EEESCCCEEEECTTS-SEEEEEEGGGTEEEEEESSSTTTT--CEEEEEE-------------CS
T ss_pred CCEEEEec--------cCCccCcceEECCCC-CEEEEEeCCCCeEEEEECCCCcCC--ccceEEe-------------CC
Confidence 33322211 111335679999998 755555 56689999998753210 0011110 12
Q ss_pred cceeEEEEcCCCCEEEEec-----------CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCC
Q 014644 248 ASISDIKFANDGQHLLSRD-----------YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDG 316 (421)
Q Consensus 248 ~~v~~~~~s~~~~~l~~~~-----------~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 316 (421)
+ ...+++.++|++.++.. .+.|..+|.. ++.+..+........ . .+..+++ .++
T Consensus 230 g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~~~~~~~~~g~~~--------~---~~~~~~~-~~g 294 (322)
T 2fp8_A 230 N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNILEVIPLPPPFAG--------E---HFEQIQE-HDG 294 (322)
T ss_dssp S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCEEEEEECCTTTTT--------S---CCCEEEE-ETT
T ss_pred C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC--CCEEEEEECCCCCcc--------c---cceEEEE-eCC
Confidence 3 67899999998776642 2557777763 676666654432100 0 1145555 366
Q ss_pred CEEEEeeCCCeEEEEecCCC
Q 014644 317 LHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 317 ~~l~~~s~dg~i~iwd~~~~ 336 (421)
++.++...++.|..+++...
T Consensus 295 ~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 295 LLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEECSSCSEEEEEEC---
T ss_pred EEEEeecCCCceEEEecccc
Confidence 66666667888999987643
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.27 E-value=0.00056 Score=56.70 Aligned_cols=143 Identities=8% Similarity=0.003 Sum_probs=83.3
Q ss_pred CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhh
Q 014644 151 ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARI 229 (421)
Q Consensus 151 ~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 229 (421)
+..+.. .++.+.+||.+ +.+.+..+.. .+ .-..+ .+++ ..|+.+..++.|.++|..+.+.. +.
T Consensus 76 ~ly~ltw~~~~v~v~D~~-tl~~~~ti~~-----~~---~Gwgl--t~dg-~~L~vSdgs~~l~~iDp~t~~~~----~~ 139 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLA-TLTPRARFRY-----PG---EGWAL--TSDD-SHLYMSDGTAVIRKLDPDTLQQV----GS 139 (243)
T ss_dssp EEEEEESSSSEEEEEETT-TTEEEEEEEC-----SS---CCCEE--EECS-SCEEEECSSSEEEEECTTTCCEE----EE
T ss_pred EEEEEEeeCCEEEEEECC-cCcEEEEEeC-----CC---CceEE--eeCC-CEEEEECCCCeEEEEeCCCCeEE----EE
Confidence 333445 89999999998 5666666531 11 11344 4667 56666667889999999886644 22
Q ss_pred hccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCccccccc--ccCCCccee
Q 014644 230 LRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCD--LYNNDSIFD 306 (421)
Q Consensus 230 ~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 306 (421)
+.. ...+ ..-..++.+.+. +|+..+..-. ..|.+.|.++ ++++..+....-.. .... ....+..
T Consensus 140 I~V-~~~g-------~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~-~~~~~~~~~~~vl-- 206 (243)
T 3mbr_X 140 IKV-TAGG-------RPLDNLNELEWV-NGELLANVWLTSRIARIDPAS-GKVVAWIDLQALVP-DADALTDSTNDVL-- 206 (243)
T ss_dssp EEC-EETT-------EECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT-CBEEEEEECGGGST-TTTSCCCTTSSCE--
T ss_pred EEE-ccCC-------cccccceeeEEe-CCEEEEEECCCCeEEEEECCC-CCEEEEEECCcCcc-ccccccCCcCCce--
Confidence 222 0000 001245666766 6765554434 8999999997 88888877542110 0000 0001111
Q ss_pred eeEEEEcCCCCEEEEee
Q 014644 307 KFECSVSGDGLHFATGS 323 (421)
Q Consensus 307 ~~~~~~sp~~~~l~~~s 323 (421)
..++++|+++.|+..+
T Consensus 207 -NGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 207 -NGIAFDAEHDRLFVTG 222 (243)
T ss_dssp -EEEEEETTTTEEEEEE
T ss_pred -EEEEEcCCCCEEEEEC
Confidence 7899999866655544
No 253
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.25 E-value=0.00059 Score=61.50 Aligned_cols=152 Identities=13% Similarity=0.091 Sum_probs=83.7
Q ss_pred CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCC---e-eEEEEecCCCCeEEEEEcCCeEEEEECCcccccc
Q 014644 150 CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEV---I-TSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCD 224 (421)
Q Consensus 150 ~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~---v-~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~ 224 (421)
+..++.+ .++.|..+|..++....+.- .....-...... + ..... .+ ..++.++.++.+..+|..+++..
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~--~~-~~v~~~~~~g~l~~~d~~tG~~~- 262 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVV--VN-GVVFALAYNGNLTALDLRSGQIM- 262 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEE--ET-TEEEEECTTSCEEEEETTTCCEE-
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEE--EC-CEEEEEecCcEEEEEECCCCcEE-
Confidence 3466667 89999999998444433321 110000000000 1 11111 13 56777888999999999887643
Q ss_pred cchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-CCeEEEEECCCCCcceeEEeeccCcccccccccCCCc
Q 014644 225 HSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDS 303 (421)
Q Consensus 225 ~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (421)
+... ......+... +..+..++ ++.+..+|..+ ++.+.......... .
T Consensus 263 -----w~~~-------------~~~~~~~~~~--~~~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~--~-------- 311 (376)
T 3q7m_A 263 -----WKRE-------------LGSVNDFIVD--GNRIYLVDQNDRVMALTIDG-GVTLWTQSDLLHRL--L-------- 311 (376)
T ss_dssp -----EEEC-------------CCCEEEEEEE--TTEEEEEETTCCEEEEETTT-CCEEEEECTTTTSC--C--------
T ss_pred -----eecc-------------CCCCCCceEE--CCEEEEEcCCCeEEEEECCC-CcEEEeecccCCCc--c--------
Confidence 2220 1122333333 44555554 48999999986 77665543111110 0
Q ss_pred ceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 304 IFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 304 ~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
..... .+..|+.++.+|.|+.+|..++ .......
T Consensus 312 ----~~~~~--~~~~l~v~~~~g~l~~~d~~tG-~~~~~~~ 345 (376)
T 3q7m_A 312 ----TSPVL--YNGNLVVGDSEGYLHWINVEDG-RFVAQQK 345 (376)
T ss_dssp ----CCCEE--ETTEEEEECTTSEEEEEETTTC-CEEEEEE
T ss_pred ----cCCEE--ECCEEEEEeCCCeEEEEECCCC-cEEEEEe
Confidence 12222 2467888999999999999987 4433333
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.20 E-value=0.00027 Score=59.16 Aligned_cols=203 Identities=10% Similarity=0.047 Sum_probs=116.5
Q ss_pred cccccccccc--EEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCce
Q 014644 26 YLKSLEIEEK--INRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFA 103 (421)
Q Consensus 26 ~~~~~~h~~~--V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 103 (421)
.++.+.|... ...+.| + ++.++.+.+.+|.|++.|+++++.....
T Consensus 45 Vv~~~phd~~~ftqGL~~--~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~------------------------------ 91 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVF--H-QGHFFESTGHQGTLRQLSLESAQPVWME------------------------------ 91 (268)
T ss_dssp EEEEEECCTTCCEEEEEE--E-TTEEEEEETTTTEEEECCSSCSSCSEEE------------------------------
T ss_pred EEEEEcCCCccccceEEE--E-CCEEEEEcCCCCEEEEEECCCCcEEeEE------------------------------
Confidence 4445555433 467888 3 4678888889999999999998722111
Q ss_pred eeeecccccccceeEEeecccceeeeeeeecCCCCcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCC
Q 014644 104 HGYHLEWTENMATKIANVGNSVHARCQKVYPHAHDFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN 182 (421)
Q Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~ 182 (421)
+ .... --..+++.. +++.+.. .++.+.+||.+ +.+.+..+..
T Consensus 92 -----------------------------l-~~~~-FgeGit~~g-~~Ly~ltw~~~~v~V~D~~-Tl~~~~ti~~---- 134 (268)
T 3nok_A 92 -----------------------------R-LGNI-FAEGLASDG-ERLYQLTWTEGLLFTWSGM-PPQRERTTRY---- 134 (268)
T ss_dssp -----------------------------E-CTTC-CEEEEEECS-SCEEEEESSSCEEEEEETT-TTEEEEEEEC----
T ss_pred -----------------------------C-CCCc-ceeEEEEeC-CEEEEEEccCCEEEEEECC-cCcEEEEEeC----
Confidence 1 1100 011233332 3344445 89999999998 6666666632
Q ss_pred CCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE
Q 014644 183 MDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL 262 (421)
Q Consensus 183 ~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (421)
.+. -..++ +++ ..|+.+..++.|.++|..+.+.. ..+.. ...+ ..-..++.+.|. +|+..
T Consensus 135 -~~e---GwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~----~~I~V-~~~g-------~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 135 -SGE---GWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALV----GAVQV-KLRG-------QPVELINELECA-NGVIY 194 (268)
T ss_dssp -SSC---CCCEE--EET-TEEEEECSSSEEEEECTTTCCEE----EEEEC-EETT-------EECCCEEEEEEE-TTEEE
T ss_pred -CCc---eeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEE----EEEEe-CCCC-------cccccccccEEe-CCEEE
Confidence 111 13343 567 66776667899999999887654 22222 0000 001245677777 77655
Q ss_pred EEecC-CeEEEEECCCCCcceeEEeeccCcccccc-cccCCCcceeeeEEEEcCCCCEE-EEe
Q 014644 263 LSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC-DLYNNDSIFDKFECSVSGDGLHF-ATG 322 (421)
Q Consensus 263 ~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sp~~~~l-~~~ 322 (421)
+..-. +.|.+.|.++ ++++..+....-.. ... .....+.+ ...++++|+++.| ++|
T Consensus 195 anvw~s~~I~vIDp~T-G~V~~~Idl~~L~~-~~~~~~~~~~~v--lNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPAT-GTVVGVIDASALTR-AVAGQVTNPEAV--LNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTT-CBEEEEEECHHHHH-HHTTTCCCTTCC--EEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCC-CcEEEEEECCCCcc-cccccccCcCCc--eEEEEEcCCCCEEEEeC
Confidence 54434 8999999987 88888876532100 000 00000111 1789999975554 444
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.20 E-value=0.0019 Score=54.24 Aligned_cols=176 Identities=11% Similarity=0.129 Sum_probs=98.8
Q ss_pred ceEEEeecCCCCEEEEE-cCCcEEEEeCCCCce--eeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 140 NINSISNNSDCETFVSA-DDLRINLWNLEISDQ--CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
....+++.+++.++++. .++.+.++++..... ......... ...........++|+|.+ +.|+++.......+|.
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~-~~~~~N~g~EGLA~d~~~-~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPL-QESPTNCGFEGLAYSRQD-HTFWFFKEKNPIEVYK 148 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCC-SSCCCSSCCEEEEEETTT-TEEEEEEESSSEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeecccc-ccccccCCcceEEEeCCC-CEEEEEECcCCceEEE
Confidence 46677888888887887 788999998874443 222222110 012234557899999998 6777776655555555
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEE-EEecC-CeEEEEECCCCCcceeEEeeccCcccc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHL-LSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPK 294 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~ 294 (421)
+. +............ ..-. -......+.+++++|....+ +.... ..+..+|.. ++++..+....+.-.
T Consensus 149 ~~-g~~~~~~l~i~~~-~~~~-----~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~- 218 (255)
T 3qqz_A 149 VN-GLLSSNELHISKD-KALQ-----RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRG- 218 (255)
T ss_dssp EE-STTCSSCCEEEEC-HHHH-----HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGG-
T ss_pred Ec-ccccCCceeeecc-hhhc-----cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCC-
Confidence 54 1100000011100 0000 00012357899999965444 44444 889999975 666666654432100
Q ss_pred cccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 295 LCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
+. ..+--.-.++|.++|+ |+..++-+.++.+.-
T Consensus 219 l~-----~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 219 LS-----HNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp CS-----SCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred cc-----cccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence 00 0000115899999998 555688787777754
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.14 E-value=0.0088 Score=59.78 Aligned_cols=245 Identities=11% Similarity=0.015 Sum_probs=131.8
Q ss_pred CcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEEC
Q 014644 138 DFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDM 217 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~ 217 (421)
...|.++...++|.+.+...++-|..|+.. ... +..+...+..-.-....|.++...++| . |..|+.++-|..||.
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~-~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPI-RNR-FKNIRNIPYKNSLSDNVVSCIVEDKDK-N-LWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGG-GGS-SEEECCCTTSSSCSCSSEEEEEECTTS-C-EEEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCC-ccc-ceEEcCCCCCCCCCCCeeEEEEECCCC-C-EEEEECCCCeEEEcC
Confidence 356899999999988776676778888876 222 222211100001123568999888887 4 555777767899998
Q ss_pred CcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCcccccc
Q 014644 218 RQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC 296 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
.++... .+......+. ..-....|.++...++|+.|..|+. +.|..+|..+ ++ ...+......
T Consensus 385 ~~~~~~-----~~~~~~~~~~----~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~----- 448 (795)
T 4a2l_A 385 ITQRFT-----SYTLQEDESA----RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQ----- 448 (795)
T ss_dssp TTCCEE-----EECCC----------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT-CC-EEEECTTTSC-----
T ss_pred CCCcEE-----EEecCCCCcc----cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC-Cc-EEEeecCCCC-----
Confidence 765422 1110000000 0001356889999888984444544 7799999875 43 3333211100
Q ss_pred cccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec-------CCCCccceeeecCCccccccccee
Q 014644 297 DLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA-------GKNENRKPILQAAPRARRSSLSNL 369 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l 369 (421)
.... .|.++...++|.+.+. +. +-|.+||..++ . ...+.. ....+..+...++ +. |
T Consensus 449 --l~~~---~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~i~~d~~--g~------l 511 (795)
T 4a2l_A 449 --LVNE---NVYAILPDGEGNLWLG-TL-SALVRFNPEQR-S-FTTIEKEKDGTPVVSKQITTLFRDSH--KR------L 511 (795)
T ss_dssp --CSCS---CEEEEEECSSSCEEEE-ES-SCEEEEETTTT-E-EEECCBCTTCCBCCCCCEEEEEECTT--CC------E
T ss_pred --cCCC---eeEEEEECCCCCEEEE-ec-CceeEEeCCCC-e-EEEccccccccccCCceEEEEEECCC--CC------E
Confidence 0011 1267888888876554 44 45888887764 1 111111 1133444443332 33 3
Q ss_pred eeecccCcccCCC-CCccc------cccccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 370 TRGLYRQAHENSS-SGHHE------LSYNLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 370 ~~g~~d~~~iw~~-~~~~~------~~~~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
-.|...|...++. .+... ........|.++...++|.+.++... +|+.|+
T Consensus 512 Wigt~~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d 568 (795)
T 4a2l_A 512 WIGGEEGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFN 568 (795)
T ss_dssp EEEESSCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEE
T ss_pred EEEeCCceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeEC
Confidence 3333344433411 11110 00112356889999999987665554 888875
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.13 E-value=0.0045 Score=55.96 Aligned_cols=162 Identities=10% Similarity=0.043 Sum_probs=93.4
Q ss_pred cceEEEeecCCCCEEEE-E-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cC-CeEEE
Q 014644 139 FNINSISNNSDCETFVS-A-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SR-GFVRL 214 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s-~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-~~v~i 214 (421)
.....+++.+.+..|.. - ..+.|.+.+++ +......+ .........++++|.+ ..|+.+. .. +.|..
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~d-g~~~~~l~-------~~~l~~P~giavdp~~-g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVLL-------WQSLEKPRAIALHPME-GTIYWTDWGNTPRIEA 229 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTT-SCSCEEEE-------CSSCSCEEEEEEETTT-TEEEEEECSSSCEEEE
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-CCceEEee-------cCCCCCCcEEEEEcCC-CeEEEeccCCCCEEEE
Confidence 34567888875555544 4 67788888887 33222222 2223456899999977 5555444 34 67888
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeeccCcc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
+++...... ..... .-...+.|+++|++..|..+. . +.|..+|+. +.....+.......
T Consensus 230 ~~~dG~~~~----~~~~~-------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~~~~~~~~~~ 290 (386)
T 3v65_B 230 SSMDGSGRR----IIADT-------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSHRKAVISQGLPH 290 (386)
T ss_dssp EETTSCSCE----EEECS-------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT--SCSCEEEECSSCSS
T ss_pred EeCCCCCcE----EEEEC-------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC--CCeeEEEEECCCCC
Confidence 887643211 11111 023568999998777776653 4 889999986 33222222111100
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
..++++. .+....+-...+.|..++..++.. ...+.
T Consensus 291 --------------P~giav~-~~~ly~td~~~~~V~~~~~~~G~~-~~~i~ 326 (386)
T 3v65_B 291 --------------PFAITVF-EDSLYWTDWHTKSINSANKFTGKN-QEIIR 326 (386)
T ss_dssp --------------EEEEEEE-TTEEEEEETTTTEEEEEETTTCCS-CEEEE
T ss_pred --------------ceEEEEE-CCEEEEeeCCCCeEEEEECCCCcc-eEEEc
Confidence 1467773 445555666678898888666633 34443
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.10 E-value=0.003 Score=61.65 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=48.9
Q ss_pred EEEEecCCCCeEEEEEcCC-------------------eEEEEECCcccccccchhhhccccccCCCcccccccccceeE
Q 014644 192 SAEFHPIYCNLLAYSSSRG-------------------FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~-------------------~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
.++++|+. .+++.++.++ .|..+|..+++..-+... ..| ....+. ...+...
T Consensus 234 ~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~--~~~-----~~wd~~-~~~~~~~ 304 (668)
T 1kv9_A 234 SMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV--TPG-----DSWDFT-ATQQITL 304 (668)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES--STT-----CCSCCC-CCSCEEE
T ss_pred ceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec--CCC-----cccccc-CCCCcEE
Confidence 57888887 7888887766 489999999875421100 000 000000 0122222
Q ss_pred EEEcCCCC---EEEEecC-CeEEEEECCCCCcceeEE
Q 014644 253 IKFANDGQ---HLLSRDY-MNLKLWDIRMDSTPVATF 285 (421)
Q Consensus 253 ~~~s~~~~---~l~~~~~-~~i~i~d~~~~~~~~~~~ 285 (421)
..+..+|+ .++.++. |.++++|..+ ++++...
T Consensus 305 ~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~ 340 (668)
T 1kv9_A 305 AELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAE 340 (668)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEE
T ss_pred EEeccCCcEEEEEEEECCCCEEEEEECCC-CCEeccc
Confidence 23334665 5666765 9999999987 8777544
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.08 E-value=0.00037 Score=69.12 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=72.3
Q ss_pred CeeEEEEe-cCCCCeEEEEEc-CC----eEEEEECCcc-cccccchhhhccccccCCCcccccccccceeEEEEcCCCCE
Q 014644 189 VITSAEFH-PIYCNLLAYSSS-RG----FVRLVDMRQS-ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQH 261 (421)
Q Consensus 189 ~v~~~~~~-p~~~~~l~s~~~-d~----~v~iwd~~~~-~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (421)
.+...+|| ||| ++|+.+.. +| +|+++|+.++ +... ..+ ......++|+|||+.
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~~~----------------~~~~~~~~WspDg~~ 234 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTIA---DKV----------------SGTNGEIVWGPDHTS 234 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCCC---CCE----------------EEECSCCEECSSTTE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeCC---ccc----------------cCceeeEEEecCCCE
Confidence 67889999 999 77775543 33 5999999887 4221 111 112457899999988
Q ss_pred EEEec-C-----CeEEEEECCCCCcc--eeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC---CCeEEE
Q 014644 262 LLSRD-Y-----MNLKLWDIRMDSTP--VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY---SNLLRI 330 (421)
Q Consensus 262 l~~~~-~-----~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~---dg~i~i 330 (421)
|+... + ..|+.+++.+ ++. ...+...... . ..++.|+|||++|+..+. ...|++
T Consensus 235 l~y~~~d~~~~~~~v~~~~lgt-~~~~~~lv~~~~~~~------------~--~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 235 LFYVTKDETLRENKVWRHVMGK-LQSEDVCLYEEHNPL------------F--SAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp EEEEEECTTCCEEEEEEEETTS-CGGGCEEEEECCCTT------------C--EEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred EEEEEECCCCCCCEEEEEECCC-CchhcEEEEecCCCc------------e--EEEEEECCCCCEEEEEecCCCCceEEE
Confidence 77542 2 2578888865 322 2223221111 0 147899999999886653 446889
Q ss_pred EecCCC
Q 014644 331 FSHGVG 336 (421)
Q Consensus 331 wd~~~~ 336 (421)
+|+.++
T Consensus 300 ~d~~~~ 305 (751)
T 2xe4_A 300 LDLRKG 305 (751)
T ss_dssp EESSSC
T ss_pred EECCCC
Confidence 998875
No 260
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.03 E-value=0.004 Score=60.73 Aligned_cols=183 Identities=14% Similarity=0.136 Sum_probs=100.6
Q ss_pred EEeecCCCCEEEEE-cCC-------------------cEEEEeCCCCceeeeeeecCCCCCCc--cCCCeeEEEEecCCC
Q 014644 143 SISNNSDCETFVSA-DDL-------------------RINLWNLEISDQCFNIVDMKPSNMDD--LTEVITSAEFHPIYC 200 (421)
Q Consensus 143 ~l~~~~~~~~l~s~-~d~-------------------~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~ 200 (421)
.+++.|+...++.+ .++ .|..+|.+++....+ ++..+..... ...+.....+..++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~-~~~~~~~~wd~~~~~~~~~~d~~~~G- 311 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWH-YQVTPGDSWDFTATQQITLAELNIDG- 311 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE-EESSTTCCSCCCCCSCEEEEEEEETT-
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeE-eecCCCccccccCCCCcEEEEeccCC-
Confidence 46777877788777 655 499999985444433 3211100000 11223333334465
Q ss_pred C---eEEEEEcCCeEEEEECCcccccccchh---hhccccc----cCC--Ccccccc--------cc--cceeEEEEcCC
Q 014644 201 N---LLAYSSSRGFVRLVDMRQSALCDHSAR---ILRDAAE----SHG--SKSFFTE--------II--ASISDIKFAND 258 (421)
Q Consensus 201 ~---~l~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~h~~----~~~--~~~~~~~--------~~--~~v~~~~~s~~ 258 (421)
+ .++.++.+|.+.++|..+++....... .+..... .+. ....+.. .. ..-..++++|+
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~ 391 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPG 391 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCC
Confidence 4 688889999999999999875411000 0000000 000 0000000 00 00123677776
Q ss_pred CCEEEEe------------------------------------cC-CeEEEEECCCCCcceeEEeeccCcccccccccCC
Q 014644 259 GQHLLSR------------------------------------DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNN 301 (421)
Q Consensus 259 ~~~l~~~------------------------------------~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
..++... .. +.|..||+.+ ++.+-+.......
T Consensus 392 ~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~~~~---------- 460 (668)
T 1kv9_A 392 TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYPTHW---------- 460 (668)
T ss_dssp TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEESSSC----------
T ss_pred CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-CcEEEEccCCCCC----------
Confidence 5554431 12 7799999987 8877666544322
Q ss_pred CcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec
Q 014644 302 DSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA 345 (421)
Q Consensus 302 ~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~ 345 (421)
....+...+.+++.++.||.|+.||.+++ +....++.
T Consensus 461 ------~~~~~~t~gg~vf~g~~dg~l~a~d~~tG-~~l~~~~~ 497 (668)
T 1kv9_A 461 ------NGGTLSTAGNLVFQGTAAGQMHAYSADKG-EALWQFEA 497 (668)
T ss_dssp ------CCCEEEETTTEEEEECTTSEEEEEETTTC-CEEEEEEC
T ss_pred ------cCceeEeCCCEEEEECCcccchhhhhhcC-hhheEecC
Confidence 23344456778889999999999999998 44444443
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.90 E-value=0.007 Score=58.99 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=46.4
Q ss_pred eEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cC-----CeE
Q 014644 141 INSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SR-----GFV 212 (421)
Q Consensus 141 v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-----~~v 212 (421)
..++++..++++++.| .+..+.+||..+ .. ...+ ..+.... .-.+++..+++ ++++.|+ .+ ..+
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t-~~-W~~~----~~~~~~R-~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSS-DS-WIPG----PDMQVAR-GYQSSATMSDG-RVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGG-TE-EEEC----CCCSSCC-SSCEEEECTTS-CEEEECCCCCSSSCCCCE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcC-Cc-eeEC----CCCCccc-cccceEEecCC-eEEEEeCcccCCcccccc
Confidence 3456777899999987 567899999983 32 2222 1122111 11345566788 8888887 34 568
Q ss_pred EEEECCccc
Q 014644 213 RLVDMRQSA 221 (421)
Q Consensus 213 ~iwd~~~~~ 221 (421)
.+||..+.+
T Consensus 317 e~yd~~t~~ 325 (656)
T 1k3i_A 317 EVYSPSSKT 325 (656)
T ss_dssp EEEETTTTE
T ss_pred eEeCCCCCc
Confidence 999998754
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.03 Score=55.76 Aligned_cols=248 Identities=11% Similarity=0.035 Sum_probs=129.5
Q ss_pred CcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeee-------cCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC
Q 014644 138 DFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVD-------MKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG 210 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~ 210 (421)
...|.++...++|.+.+....+-|.++|.. ......... .....-.-....|.++...++| . |-.|+.++
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~-lWigt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQ-QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-N-IWIGTWGG 333 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETT-CC---------CEEECBCSSTTSBSSSCEEEEEECSSC-C-EEEEEBSS
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCC-CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-C-EEEEecCC
Confidence 346889988888877665554567888887 332211110 0000001234578999888887 4 55567677
Q ss_pred eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccC
Q 014644 211 FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEH 290 (421)
Q Consensus 211 ~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 290 (421)
-|..++....... .+.. ........ ......|.++...++|.+.+....+.|..||..+ +. ...+.....
T Consensus 334 Gl~~~~~~~~~~~-----~~~~-~~~~~~~~--~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~-~~~~~~~~~ 403 (781)
T 3v9f_A 334 GINFISNAPPTFH-----TWSY-SPTQMNES--SLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGK-RV-AIYNKENRE 403 (781)
T ss_dssp CEEEECSSCCSCE-----EEC-----CCCSS--CCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTE-EE-EECC-----
T ss_pred eEEEeCCCCCcce-----eecc-CccccccC--CCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCC-Ce-EEEccCCCC
Confidence 7888887754321 1110 00000000 0013568999998888766554446688899753 22 221111000
Q ss_pred cccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEec---CCCCccceeeecCCcccccccc
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEA---GKNENRKPILQAAPRARRSSLS 367 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 367 (421)
. .... |.++...++|.+. .|+.++-|..++..++ . ...+.. ....+.++...++ +.
T Consensus 404 ~--------~~~~---v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~-~-~~~~~~~~~~~~~v~~i~~d~~--g~----- 462 (781)
T 3v9f_A 404 L--------LSNS---VLCSLKDSEGNLW-FGTYLGNISYYNTRLK-K-FQIIELEKNELLDVRVFYEDKN--KK----- 462 (781)
T ss_dssp C--------CCSB---EEEEEECTTSCEE-EEETTEEEEEECSSSC-E-EEECCSTTTCCCCEEEEEECTT--SE-----
T ss_pred C--------CCcc---eEEEEECCCCCEE-EEeccCCEEEEcCCCC-c-EEEeccCCCCCCeEEEEEECCC--CC-----
Confidence 0 0111 2677877777754 4677677888887655 2 122211 1233444443332 22
Q ss_pred eeeeecccCcccC-CCCCcccccc------ccccCeEEEEEccCCCeEEEecCCceEEEe
Q 014644 368 NLTRGLYRQAHEN-SSSGHHELSY------NLSSKLLHLAWHPTTNLIACANGNSLFFHY 420 (421)
Q Consensus 368 ~l~~g~~d~~~iw-~~~~~~~~~~------~~~~~v~~~~~spd~~~la~~~~~~~~i~~ 420 (421)
|..|...|...+ ...+...... .....|.++...++|.+.+....++|+.|+
T Consensus 463 -lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~ 521 (781)
T 3v9f_A 463 -IWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYT 521 (781)
T ss_dssp -EEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEEC
T ss_pred -EEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEe
Confidence 333433444333 1111111110 113578899999999887766667787775
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.83 E-value=0.015 Score=51.71 Aligned_cols=157 Identities=10% Similarity=0.055 Sum_probs=91.9
Q ss_pred cceEEEeecCCCCEEE-EE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cC-CeEEE
Q 014644 139 FNINSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SR-GFVRL 214 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~-s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-~~v~i 214 (421)
.....+++.+.+..|. +- ..+.|.+.+++ +......+ .........++++|.+ ..|+.+. .. +.|..
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~~~~l~-------~~~l~~P~~iavdp~~-g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLD-GAHRKVLL-------WQSLEKPRAIALHPME-GTIYWTDWGNTPRIEA 186 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE-------CTTCSCEEEEEEETTT-TEEEEEECSSSCEEEE
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCC-CCceEEEE-------eCCCCCcceEEEecCc-CeEEEeccCCCCEEEE
Confidence 3457788887555554 44 67889999987 33222221 2223456899999976 4454443 44 77888
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeeccCcc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
+++...... ..... .-...+.++++|++..|..+. . +.|..+|+. +.....+......
T Consensus 187 ~~~dG~~~~----~~~~~-------------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d--G~~~~~~~~~~~~- 246 (349)
T 3v64_C 187 SSMDGSGRR----IIADT-------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD--GSHRKAVISQGLP- 246 (349)
T ss_dssp EETTSCSCE----ESCCS-------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEECSSCS-
T ss_pred EeCCCCCcE----EEEEC-------------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC--CCceEEEEeCCCC-
Confidence 887643211 11111 123578999999777776653 3 889999986 3332222211110
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
...++++. .+....+-...+.|...+..++..
T Consensus 247 -------------~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 247 -------------HPFAITVF-EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp -------------SEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred -------------CceEEEEE-CCEEEEecCCCCeEEEEEccCCCc
Confidence 01467773 445555555678888888666633
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.81 E-value=0.0093 Score=52.20 Aligned_cols=150 Identities=9% Similarity=0.096 Sum_probs=86.1
Q ss_pred CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE--ecCCCC-eEEEEEcCCeEEEEECC---cccccccchhhhc
Q 014644 158 DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF--HPIYCN-LLAYSSSRGFVRLVDMR---QSALCDHSARILR 231 (421)
Q Consensus 158 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~-~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~ 231 (421)
+++|.+|++......+..+......+..-...++.+|+ +|.... +++....+|.+..|++. .+....+.++.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 68999997753333343331000000011155777888 775423 57777788999999884 3323333345554
Q ss_pred cccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCC----CcceeEEeeccCcccccccccCCCccee
Q 014644 232 DAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMD----STPVATFKIHEHLRPKLCDLYNNDSIFD 306 (421)
Q Consensus 232 ~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (421)
. .+.+..+...+....|..+.+ ..|..++.+.. .+.+..+.. ... ..+
T Consensus 178 l--------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~-g~l------------~aD 230 (355)
T 3amr_A 178 M--------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG-RHL------------TRD 230 (355)
T ss_dssp C--------------SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS-SSB------------CSC
T ss_pred C--------------CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecC-Ccc------------ccC
Confidence 4 456888999988778887765 44666775422 223322211 111 012
Q ss_pred eeEEEE--cCCCC-EEEEee-CCCeEEEEecC
Q 014644 307 KFECSV--SGDGL-HFATGS-YSNLLRIFSHG 334 (421)
Q Consensus 307 ~~~~~~--sp~~~-~l~~~s-~dg~i~iwd~~ 334 (421)
+..+++ .++++ +|++.+ .++++.+||.+
T Consensus 231 vEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 231 IEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 356776 55666 666666 57799999997
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.80 E-value=0.027 Score=53.77 Aligned_cols=59 Identities=8% Similarity=0.008 Sum_probs=39.1
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+.|..||+.+ ++.+.++...... .+..+...+..++.++.||.|+.+|.+++ +.+-.++
T Consensus 444 g~l~a~D~~t-G~~~W~~~~~~~~----------------~~~~~~t~gg~v~~g~~dg~l~a~D~~tG-~~lw~~~ 502 (571)
T 2ad6_A 444 GQIRAFDLTT-GKAKWTKWEKFAA----------------WGGTLYTKGGLVWYATLDGYLKALDNKDG-KELWNFK 502 (571)
T ss_dssp EEEEEECTTT-CCEEEEEEESSCC----------------CSBCEEETTTEEEEECTTSEEEEEETTTC-CEEEEEE
T ss_pred CeEEEEECCC-CCEEEEecCCCCc----------------cceeEEECCCEEEEEcCCCeEEEEECCCC-CEEEEEe
Confidence 6888999886 7776666543221 12222334567778999999999999998 4443343
No 266
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.70 E-value=0.024 Score=50.39 Aligned_cols=114 Identities=14% Similarity=0.084 Sum_probs=62.5
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC---CCCeEEEEEcC-----C
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSSR-----G 210 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~d-----~ 210 (421)
.....++|.|+|+++++-.++.|++++ . +......++. ...........++|+|+ +..+.++-... .
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~-~--g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR-E--GRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE-T--TEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE-C--CCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 346799999999977766669999998 4 2221111111 11223456789999998 41344433332 5
Q ss_pred eEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 211 FVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 211 ~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
.|..++...+... ....++.. .+.. .........++|.|||.+.++.
T Consensus 106 ~v~r~~~~~~~~~-~~~~l~~~---~p~~----~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 106 QVVRLRHLGERGV-LDRVVLDG---IPAR----PHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEEECSSCEE-EEEEEEEE---ECCC----TTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcC-ceEEEEEe---CCCC----CCCCcCCceEEECCCCCEEEEE
Confidence 6777877643211 10111111 0000 0001234689999999777764
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.68 E-value=0.031 Score=51.21 Aligned_cols=155 Identities=8% Similarity=-0.047 Sum_probs=87.8
Q ss_pred cceEEEeecCC--CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC----e
Q 014644 139 FNINSISNNSD--CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG----F 211 (421)
Q Consensus 139 ~~v~~l~~~~~--~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~----~ 211 (421)
.....++|.|+ ...|..+ ..+.|+.+|.. .+...... ........+++++++ + |+.+...+ .
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~-~g~v~~~~--------~~~~~P~giavd~dG-~-lyVad~~~~~~~~ 207 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFV-NQYVDIKT--------TNIGQCADVNFTLNG-D-MVVVDDQSSDTNT 207 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETT-TTEEEEEC--------CCCSCEEEEEECTTC-C-EEEEECCSCTTSE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECC-CCEEEEee--------cCCCCccEEEECCCC-C-EEEEcCCCCcccc
Confidence 34678999984 3445555 34899999986 34433322 233557899999999 7 44444321 1
Q ss_pred -EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC-CeEEEEECCCCCcceeEEeec
Q 014644 212 -VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIH 288 (421)
Q Consensus 212 -v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~ 288 (421)
+...+.. +..... ..+. .-.....++++| +|.+.++-.. +.|+.+|..+ +.....+...
T Consensus 208 gv~~~~~~-~~~~~~--~~~~--------------~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~ 269 (433)
T 4hw6_A 208 GIYLFTRA-SGFTER--LSLC--------------NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLTEEEVMM 269 (433)
T ss_dssp EEEEECGG-GTTCCE--EEEE--------------ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEEEEEEEC
T ss_pred eEEEEECC-CCeecc--cccc--------------ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEEEEEecc
Confidence 2222221 111000 0000 123457789999 6665555444 8899999864 5442222211
Q ss_pred cCcccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCCeEEEEecCC
Q 014644 289 EHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSNLLRIFSHGV 335 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg~i~iwd~~~ 335 (421)
.... . ...++|+|++++|+.+ ...+.|+.++...
T Consensus 270 ~~~~--~-----------~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 270 DTKG--S-----------NFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp SCCS--S-----------CEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCC--C-----------cccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 1100 0 0469999999966555 4568899988763
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.67 E-value=0.014 Score=50.68 Aligned_cols=151 Identities=11% Similarity=0.076 Sum_probs=80.0
Q ss_pred EEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeec--CCCCCCccCCCeeEEEEecCCCCeEEE-EEcCCeEEEEEC
Q 014644 142 NSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDM--KPSNMDDLTEVITSAEFHPIYCNLLAY-SSSRGFVRLVDM 217 (421)
Q Consensus 142 ~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~s-~~~d~~v~iwd~ 217 (421)
..++..+++..+++- .++.|..+|.......+..... ..............+ +|++ ..|+. -...+.|..+|+
T Consensus 120 ~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg-~~lyv~d~~~~~I~~~~~ 196 (306)
T 2p4o_A 120 NGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG-NFLYVSNTEKMLLLRIPV 196 (306)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET-TEEEEEETTTTEEEEEEB
T ss_pred CcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC-CEEEEEeCCCCEEEEEEe
Confidence 344445555555555 6888888887622111111100 000001111234455 7887 55544 446789999998
Q ss_pred Cc-ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEEEEECCCCCcceeEEeeccCccccc
Q 014644 218 RQ-SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEHLRPKL 295 (421)
Q Consensus 218 ~~-~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 295 (421)
.. +... ....+.. ......++++++|++.++... +.|.++|.. ++............
T Consensus 197 ~~~g~~~--~~~~~~~--------------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~~~~~~~~~~~~~--- 255 (306)
T 2p4o_A 197 DSTDKPG--EPEIFVE--------------QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RSTTIIAQAEQGVI--- 255 (306)
T ss_dssp CTTSCBC--CCEEEEE--------------SCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CCEEEEECGGGTCT---
T ss_pred CCCCCCC--ccEEEec--------------cCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CCEEEEeecccccC---
Confidence 75 2211 0011111 134678999999987766654 889999874 54422111111100
Q ss_pred ccccCCCcceeeeEEEEc---CCCCEEEEeeCCC
Q 014644 296 CDLYNNDSIFDKFECSVS---GDGLHFATGSYSN 326 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~s---p~~~~l~~~s~dg 326 (421)
...+++|. |+++.|+..+..+
T Consensus 256 ----------~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 ----------GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ----------TEEEEEECCSTTTTTEEEEEECTT
T ss_pred ----------CceEEEEecccCCCCEEEEECCCC
Confidence 11689998 8887777666543
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.025 Score=51.86 Aligned_cols=72 Identities=11% Similarity=0.181 Sum_probs=48.6
Q ss_pred ceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeE-EEEEcCCeEEEEE
Q 014644 140 NINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLL-AYSSSRGFVRLVD 216 (421)
Q Consensus 140 ~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~d~~v~iwd 216 (421)
....++++| ++.++++- .++.|..++.. ......... .. .......++|+|++ +.| ++-...+.|..++
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~-~~~~~~~~~-----~~-~~~~P~gia~~pdG-~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFT-TQETTPLFT-----IQ-DSGWEFHIQFHPSG-NYAYIVVVNQHYILRSD 298 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETT-TTEEEEEEE-----CS-SSSCCEEEEECTTS-SEEEEEETTTTEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECC-CCcEEEEEE-----cC-CCCcceeEEEcCCC-CEEEEEECCCCEEEEEe
Confidence 456788999 77777776 78899999987 333322221 11 12346789999999 744 4445678899987
Q ss_pred CCc
Q 014644 217 MRQ 219 (421)
Q Consensus 217 ~~~ 219 (421)
...
T Consensus 299 ~d~ 301 (430)
T 3tc9_A 299 YDW 301 (430)
T ss_dssp EET
T ss_pred CCc
Confidence 653
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.66 E-value=0.026 Score=49.40 Aligned_cols=156 Identities=11% Similarity=0.062 Sum_probs=92.1
Q ss_pred ceEEEeecCCCCEE-EEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE--cCCeEEEE
Q 014644 140 NINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS--SRGFVRLV 215 (421)
Q Consensus 140 ~v~~l~~~~~~~~l-~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~d~~v~iw 215 (421)
....+++.+.+..| ++- ..+.|.+++++ +.. .+.+. .........+++.|.+ ..|+.+. ..+.|...
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~d-G~~-~~~l~------~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~ 150 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLD-GSL-RKVLF------WQELDQPRAIALDPSS-GFMYWTDWGEVPKIERA 150 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT-SCS-CEEEE------CSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECC-CCc-EEEEE------eCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEE
Confidence 45678888755444 444 67899999987 322 22220 1233456899999976 5555555 25778888
Q ss_pred ECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeeccCccc
Q 014644 216 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLRP 293 (421)
Q Consensus 216 d~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~~~~ 293 (421)
++...... ..... .-...+.++++|++..|..+. . +.|..+|+. +.....+......
T Consensus 151 ~~dG~~~~----~~~~~-------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~~~~~~~~~-- 209 (318)
T 3sov_A 151 GMDGSSRF----IIINS-------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--GTNRQAVVKGSLP-- 209 (318)
T ss_dssp ETTSCSCE----EEECS-------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEECSCCS--
T ss_pred EcCCCCeE----EEEEC-------------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCC--CCceEEEecCCCC--
Confidence 87642211 11111 023568999999777776653 4 889999986 3333333211110
Q ss_pred ccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 294 KLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
...++++.. +..+.+-...+.|..++..+++.
T Consensus 210 ------------~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 210 ------------HPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp ------------CEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred ------------CceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 014677753 34444555678999999877744
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.63 E-value=0.049 Score=51.93 Aligned_cols=85 Identities=14% Similarity=0.041 Sum_probs=45.4
Q ss_pred EEEEecCCCCeEEEEEcC----------------CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEE
Q 014644 192 SAEFHPIYCNLLAYSSSR----------------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF 255 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~ 255 (421)
.+++.+.. ..++.++.+ +.|..+|.++++.. |.. ...+.....+.....++ -+..
T Consensus 239 ~~a~d~~~-g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~------W~~-~~~~~d~~d~~~~~~p~-l~~~ 309 (571)
T 2ad6_A 239 WYAYDPKL-NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAK------WGY-QKTPHDEWDFAGVNQMV-LTDQ 309 (571)
T ss_dssp CCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEE------EEE-ESSTTCSSCCCCCCCCE-EEEE
T ss_pred eEEEcCCC-CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEE------EEe-cCCCCcccccccCCCCE-EEec
Confidence 35677776 666666532 36899999988743 211 00000000000001122 1223
Q ss_pred cCCCC---EEEEecC-CeEEEEECCCCCcceeEEe
Q 014644 256 ANDGQ---HLLSRDY-MNLKLWDIRMDSTPVATFK 286 (421)
Q Consensus 256 s~~~~---~l~~~~~-~~i~i~d~~~~~~~~~~~~ 286 (421)
.++|+ .++.++. |.++++|..+ ++.+....
T Consensus 310 ~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~ 343 (571)
T 2ad6_A 310 PVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEK 343 (571)
T ss_dssp EETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred ccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeec
Confidence 34674 4556665 9999999987 77776654
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.0036 Score=57.47 Aligned_cols=154 Identities=8% Similarity=0.016 Sum_probs=90.5
Q ss_pred ceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc-CC----eE
Q 014644 140 NINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RG----FV 212 (421)
Q Consensus 140 ~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-d~----~v 212 (421)
....++++| ++..|..+ ..+.|+.+|+. .+...... ........++|++++ +.|+.+.. ++ .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~-~~~v~~~~--------~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v 207 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFE-KEYVSTVY--------SGLSKVRTICWTHEA-DSMIITNDQNNNDRPNN 207 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETT-TTEEEEEE--------CCCSCEEEEEECTTS-SEEEEEECCSCTTSEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECC-CCEEEEEe--------cCCCCcceEEEeCCC-CEEEEEeCCCCcccceE
Confidence 457889998 45556655 44889999987 33333322 133557899999999 75555553 22 23
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcC-CCCEEEEecC-CeEEEEECCCCCcceeEEeeccC
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFAN-DGQHLLSRDY-MNLKLWDIRMDSTPVATFKIHEH 290 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~~ 290 (421)
..++ ..+..... ..+.. ......++++| +|.++++-.. +.|..++... +...........
T Consensus 208 ~~~~-~~g~~~~~--~~l~~--------------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~-~~~~~~~~~~~~ 269 (430)
T 3tc9_A 208 YILT-RESGFKVI--TELTK--------------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT-QETTPLFTIQDS 269 (430)
T ss_dssp EEEE-GGGTSCSE--EEEEE--------------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT-TEEEEEEECSSS
T ss_pred EEEe-CCCceeee--eeecc--------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC-CcEEEEEEcCCC
Confidence 3333 33321100 01111 23467889999 6665555544 8899999864 332222222111
Q ss_pred cccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCCeEEEEecCC
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSNLLRIFSHGV 335 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg~i~iwd~~~ 335 (421)
.. ...++|+|+|++|+.. ...+.|+.++.+.
T Consensus 270 ~~--------------P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GW--------------EFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SC--------------CEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred Cc--------------ceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 10 1689999999965554 4578899988663
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.08 Score=52.72 Aligned_cols=239 Identities=10% Similarity=0.026 Sum_probs=128.6
Q ss_pred CcceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCC---CCCccCCCeeEEEEecCCCCeEEEEEcCCeEEE
Q 014644 138 DFNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPS---NMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRL 214 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~i 214 (421)
...|.++...++|.+.+...++-|..++... . .+..+...+. .-......|.++...+++ . |..|+.++-|..
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~-lWigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISNAP-P-TFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K-LWIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECSSC-C-SCEEEC----CCCSSCCSSSCEEEEEECTTS-C-EEEEEBSSCEEE
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCCCC-C-cceeeccCccccccCCCCCcceEEEEEcCCC-C-EEEEeCCCcEEE
Confidence 4568999998888877766667788888762 2 2222211000 001123568999888876 4 555676666888
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPK 294 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 294 (421)
||..++... .+.. . . ......|.++...++|.+.+....+.|..+|.++ ++ ...+... ..
T Consensus 388 ~~~~~~~~~-----~~~~-~-~-------~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~-~~~~~~~-~~--- 447 (781)
T 3v9f_A 388 FENGKRVAI-----YNKE-N-R-------ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL-KK-FQIIELE-KN--- 447 (781)
T ss_dssp EETTEEEEE-----CC--------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS-CE-EEECCST-TT---
T ss_pred EECCCCeEE-----EccC-C-C-------CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC-Cc-EEEeccC-CC---
Confidence 998765321 1100 0 0 0113578899988888766654446788898764 33 2222211 00
Q ss_pred cccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEecC-----CCCccceeeecCCccccccccee
Q 014644 295 LCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAG-----KNENRKPILQAAPRARRSSLSNL 369 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l 369 (421)
... .|.++...++|.+.+ |+. +-|..+|..++.. ....... ...+..+...++ +. |
T Consensus 448 -----~~~---~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~--g~------l 508 (781)
T 3v9f_A 448 -----ELL---DVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSE--GR------F 508 (781)
T ss_dssp -----CCC---CEEEEEECTTSEEEE-EET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTT--CC------E
T ss_pred -----CCC---eEEEEEECCCCCEEE-EEC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCC--CC------E
Confidence 011 126778887776544 455 5688899876522 2221111 123444433322 32 3
Q ss_pred eeecc-cCcccCCC-CCccccc---cc-cccCeEEEEEccCCCeEEEecCCce-EEEe
Q 014644 370 TRGLY-RQAHENSS-SGHHELS---YN-LSSKLLHLAWHPTTNLIACANGNSL-FFHY 420 (421)
Q Consensus 370 ~~g~~-d~~~iw~~-~~~~~~~---~~-~~~~v~~~~~spd~~~la~~~~~~~-~i~~ 420 (421)
-.|.. .|...++. .+..... .+ ....|.++...++|.+.++.. +++ +.|+
T Consensus 509 Wigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 509 WIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp EEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred EEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 33333 44422321 1111111 11 135688999999998766655 666 7664
No 274
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.51 E-value=0.012 Score=50.99 Aligned_cols=175 Identities=9% Similarity=0.009 Sum_probs=101.6
Q ss_pred ceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCC--cc-CCCeeEEEE---ecCCCCeEEEEEc---
Q 014644 140 NINSISNNS-DCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMD--DL-TEVITSAEF---HPIYCNLLAYSSS--- 208 (421)
Q Consensus 140 ~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~--~~-~~~v~~~~~---~p~~~~~l~s~~~--- 208 (421)
--.+++|.+ ++.++++. ..++|..|+.. .+....+ ... .+. +- ...+..+.| .|++ .++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~-~~~~~~~-~~~--~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~a 88 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPK-TQSHFNV-VID--GASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKS 88 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTT-TCCEEEE-CCT--TTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCC-CCeEEEE-ecC--CccccCCCcceeeEEEEeccCCCC-cEEEEEccccc
Confidence 345788976 56666677 89999999987 3322222 111 100 11 124579999 6887 77775432
Q ss_pred ----------CCeEEEEECC---cccccccchhhhccccccCCCcccccc-cccceeEEEEcCCCCEEEEecC--CeEEE
Q 014644 209 ----------RGFVRLVDMR---QSALCDHSARILRDAAESHGSKSFFTE-IIASISDIKFANDGQHLLSRDY--MNLKL 272 (421)
Q Consensus 209 ----------d~~v~iwd~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--~~i~i 272 (421)
+..|..||+. +++..... .+...... . +...+ .......++..++|+..++++. +.|..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~--dL~~~~~~--~-~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~r 163 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSV--NFEKVQDE--F-EKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIAR 163 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEE--ESHHHHHH--H-HHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEE
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEe--cCcccccc--c-cccccccccCCceeEECCCCCEEEeCCCCCCeEEE
Confidence 6789999998 55432100 00000000 0 00000 0235889999999998887653 55555
Q ss_pred EECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCC
Q 014644 273 WDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 273 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~ 335 (421)
.+.. ++.+..+........ .....+.++++|+|..|++....|.|..+|+..
T Consensus 164 V~pd--G~~~~~~~~~~~~~~---------~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 164 VSAD--GKTVSTFAWESGNGG---------QRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ECTT--SCCEEEEEECCCCSS---------SCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EeCC--CCEEeeeeecCCCcc---------cccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 5543 554444432221100 011226899999999888776699999999884
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.48 E-value=0.057 Score=48.92 Aligned_cols=161 Identities=9% Similarity=0.014 Sum_probs=94.7
Q ss_pred CCcceEEEeecCCCCEEE-EE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc--CCeE
Q 014644 137 HDFNINSISNNSDCETFV-SA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RGFV 212 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~-s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d~~v 212 (421)
.......+++.+.+..|. +- ..+.|.+.+++ +......+ .........++++|.+ ..|+.+.. .+.|
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~-g~~~~~l~-------~~~~~~P~~iavdp~~-g~ly~td~~~~~~I 227 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKPRAIVVDPVH-GFMYWTDWGTPAKI 227 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-TCSEEEEE-------ECSSCCEEEEEEETTT-TEEEEEECSSSCCE
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCC-CCceEEEE-------eCCCCCcceEEEeccc-CeEEEEeCCCCCEE
Confidence 345677888887544444 44 67889999987 33322222 1223457899999976 55555542 3678
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeec-c
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIH-E 289 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~-~ 289 (421)
...++...... ..... .-.....|++++++..|..+. . +.|..+|+. +.....+... .
T Consensus 228 ~~~~~dG~~~~----~~~~~-------------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d--G~~~~~~~~~~~ 288 (400)
T 3p5b_L 228 KKGGLNGVDIY----SLVTE-------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTILEDEK 288 (400)
T ss_dssp EEEETTSCSCE----EEECS-------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCCCEEEEECSS
T ss_pred EEEeCCCCccE----EEEEC-------------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC--CCccEEEEeCCC
Confidence 88887643211 11111 124678999999877777664 3 889999986 3333333221 1
Q ss_pred CcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCc
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAG 339 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 339 (421)
... ...++++. .+.++.+-...+.|..+|..++...
T Consensus 289 ~l~-------------~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 289 RLA-------------HPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp TTS-------------SEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred CCC-------------CCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence 111 00466663 3344445566788998987776443
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.46 E-value=0.059 Score=48.58 Aligned_cols=172 Identities=8% Similarity=-0.039 Sum_probs=97.8
Q ss_pred EEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEEECCcc
Q 014644 142 NSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMRQS 220 (421)
Q Consensus 142 ~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iwd~~~~ 220 (421)
.|.+..+ ..+|+.+....|+..++. +......+ . ....+..++|++.+ ..|+.+ ...+.|..+++...
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~-~~~~~~~~-------~-~~~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPH-RSEYTLLL-------N-NLENAIALDFHHRR-ELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTT-SCCCEEEE-------C-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSC
T ss_pred eECCccc-cceeEeecCccceeeccC-CCcEEEEe-------c-CCCccEEEEEecCC-CeEEEEeCCCCcEEEEecCCC
Confidence 3444455 446666655678888887 33322222 1 22457899999876 455544 46788999998764
Q ss_pred cccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccccc
Q 014644 221 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDL 298 (421)
Q Consensus 221 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (421)
... ..+.. .......+++.+.+..|... .. +.|.+.++. +.....+......
T Consensus 149 ~~~----~~~~~-------------~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d--g~~~~~l~~~~l~------- 202 (386)
T 3v65_B 149 NVE----EVVST-------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLWQSLE------- 202 (386)
T ss_dssp CEE----EEECS-------------SCSCCCCEEEETTTTEEEEEETTTTEEEECBTT--SCSCEEEECSSCS-------
T ss_pred CcE----EEEeC-------------CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC--CCceEEeecCCCC-------
Confidence 321 11111 02345778898866555544 33 788888876 3332222211100
Q ss_pred cCCCcceeeeEEEEcCCCCEEEEee-CC-CeEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 299 YNNDSIFDKFECSVSGDGLHFATGS-YS-NLLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 299 ~~~~~~~~~~~~~~sp~~~~l~~~s-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
....++++|.+..|+... .. +.|+..++... .............+.+++.+.
T Consensus 203 -------~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 203 -------KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYA 256 (386)
T ss_dssp -------CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGG
T ss_pred -------CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCC
Confidence 016899999766665554 34 67888887643 333333333344567778765
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.43 E-value=0.058 Score=47.86 Aligned_cols=174 Identities=7% Similarity=-0.042 Sum_probs=98.0
Q ss_pred ceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEEECC
Q 014644 140 NINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMR 218 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iwd~~ 218 (421)
...|.+..+ ..+|+.+....|+..++. +......+ . ....+..++|++.+ ..|+.+ ...+.|..+++.
T Consensus 35 ~~~C~~~~~-~~~ll~~~~~~I~~i~~~-g~~~~~~~-------~-~~~~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~ 103 (349)
T 3v64_C 35 RRSCKALGP-EPVLLFANRIDIRQVLPH-RSEYTLLL-------N-NLENAIALDFHHRR-ELVFWSDVTLDRILRANLN 103 (349)
T ss_dssp SSCEEESSS-CCEEEEECBSCEEEECTT-SCCEEEEE-------C-SCSCEEEEEEETTT-TEEEEEETTTTEEEEEETT
T ss_pred CCccccccc-CceeEeecccceEEEeCC-CCeeEEee-------c-CCCceEEEEEeccc-cEEEEEeccCCceEEEecC
Confidence 345556566 345666644568888887 33322222 1 22447899999876 555544 467889989887
Q ss_pred cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccc
Q 014644 219 QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLC 296 (421)
Q Consensus 219 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
..... ..... .......+++.+.+..|... .. +.|.+.++. +.....+......
T Consensus 104 g~~~~----~~~~~-------------~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d--G~~~~~l~~~~l~----- 159 (349)
T 3v64_C 104 GSNVE----EVVST-------------GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GAHRKVLLWQSLE----- 159 (349)
T ss_dssp SCSCE----EEECS-------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEECTTCS-----
T ss_pred CCCce----EEEeC-------------CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC--CCceEEEEeCCCC-----
Confidence 64321 11111 02345789999865555444 44 889999986 3333333211110
Q ss_pred cccCCCcceeeeEEEEcCCCCEEEEee-CC-CeEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 297 DLYNNDSIFDKFECSVSGDGLHFATGS-YS-NLLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~sp~~~~l~~~s-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
....++++|.+..|+... .. +.|...+++.. .........-...+.+++.+.
T Consensus 160 ---------~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 160 ---------KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp ---------CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETT
T ss_pred ---------CcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCC
Confidence 016899999766655444 44 78888887643 222222222334466777765
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.41 E-value=0.075 Score=48.69 Aligned_cols=182 Identities=9% Similarity=0.030 Sum_probs=94.0
Q ss_pred ceEEEeecC-CCCEEEEE-cCCcEEEEeCCCCcee-eeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEE
Q 014644 140 NINSISNNS-DCETFVSA-DDLRINLWNLEISDQC-FNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLV 215 (421)
Q Consensus 140 ~v~~l~~~~-~~~~l~s~-~d~~i~lwd~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iw 215 (421)
....+++.| ++.++++- .++.|+.++.. .+.. ...... +....-..++|+|++ +.|+.+ ...+.|+.+
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~-~g~~~~~~~~~------~~~~~~~~ia~dpdG-~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPA-TGTLTEEEVMM------DTKGSNFHIVWHPTG-DWAYIIYNGKHCIYRV 300 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTT-TCCEEEEEEEC------SCCSSCEEEEECTTS-SEEEEEETTTTEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECC-CCeEEEEEecc------CCCCCcccEEEeCCC-CEEEEEeCCCCEEEEE
Confidence 456788999 77777676 78889999987 3333 222211 111223479999999 755444 466889998
Q ss_pred ECCc--ccccccchhhhccccccCCCc--ccccccccceeEEEE---------cCCCCEEEEecC-CeEEEEECCCCCcc
Q 014644 216 DMRQ--SALCDHSARILRDAAESHGSK--SFFTEIIASISDIKF---------ANDGQHLLSRDY-MNLKLWDIRMDSTP 281 (421)
Q Consensus 216 d~~~--~~~~~~~~~~~~~h~~~~~~~--~~~~~~~~~v~~~~~---------s~~~~~l~~~~~-~~i~i~d~~~~~~~ 281 (421)
+... +... ....+.......... ......-.....+++ .++|.++++-.. +.|+.++.. +.
T Consensus 301 ~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~--G~- 375 (433)
T 4hw6_A 301 DYNRETGKLA--VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE--GR- 375 (433)
T ss_dssp EBCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT--SE-
T ss_pred eCCCCCcccC--cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC--CC-
Confidence 8653 2110 001111100000000 000001234677999 677766666555 889998852 53
Q ss_pred eeEEeeccCc-ccccccc--cCCCcceeeeEEEEc-CCCCEEEEeeCCCeEEEEecC
Q 014644 282 VATFKIHEHL-RPKLCDL--YNNDSIFDKFECSVS-GDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 282 ~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~s-p~~~~l~~~s~dg~i~iwd~~ 334 (421)
+..+.+.... ....... -....+.....++++ ++|.++++=..++.|+.++++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 3344332110 0000000 000011122688999 566666665667788887764
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.33 E-value=0.15 Score=50.44 Aligned_cols=163 Identities=8% Similarity=-0.008 Sum_probs=96.2
Q ss_pred CCcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc-C-CeE
Q 014644 137 HDFNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-R-GFV 212 (421)
Q Consensus 137 h~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-d-~~v 212 (421)
.......|++.+.+..|..+ ..+.|.+.+++ +.....++ .........|+++|.+ ..|+.+.. . +.|
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-G~~~~~l~-------~~~l~~P~gIaVDp~~-g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKPRAIVVDPVH-GFMYWTDWGTPAKI 539 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEE-------ECTTCCEEEEEEETTT-TEEEEEECSSSCEE
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCC-CCeEEEEE-------eCCCCCcceEEEecCC-CCEEEecCCCCCeE
Confidence 34556788898877666654 67899999998 33322222 1223457899999986 55555542 2 678
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEe-ecc
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFK-IHE 289 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~-~~~ 289 (421)
...++...... .++.. .-.....|++++.+..|..+. . +.|..+++. +.....+. ...
T Consensus 540 ~~~~~dG~~~~----~lv~~-------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d--G~~~~~v~~~~~ 600 (791)
T 3m0c_C 540 KKGGLNGVDIY----SLVTE-------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTILEDEK 600 (791)
T ss_dssp EEEETTSCCEE----EEECS-------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEEECTT
T ss_pred EEEecCCCceE----EEEeC-------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecC--CCceEEEecCCC
Confidence 88887653211 11111 124678999998777776653 3 789999986 43333332 211
Q ss_pred CcccccccccCCCcceeeeEEEEcCCCCEEE-EeeCCCeEEEEecCCCCCceeE
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGDGLHFA-TGSYSNLLRIFSHGVGSAGGIT 342 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~~s~dg~i~iwd~~~~~~~~~~ 342 (421)
... ...++++. +..|+ +-...+.|...+..++......
T Consensus 601 ~l~-------------~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 601 RLA-------------HPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTS-------------SEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ccC-------------CCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 111 00356653 33444 4445688888887777444333
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.32 E-value=0.12 Score=49.33 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=35.2
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCc
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAG 339 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~ 339 (421)
+.|..||+.+ ++.+-........ .+-.....+.+++.++.||.|+.||.++++.+
T Consensus 453 G~l~A~D~~t-G~~~W~~~~~~~~----------------~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 453 GQIKAYNAIT-GDYKWEKMERFAV----------------WGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp EEEEEECTTT-CCEEEEEEESSCC----------------CSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CeEEEEECCC-CCEEeEecCCCCc----------------cCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 6778888876 6665555422111 11112224667778999999999999998443
No 281
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.28 E-value=0.05 Score=48.11 Aligned_cols=166 Identities=10% Similarity=0.093 Sum_probs=92.3
Q ss_pred ceEEEeecCCCCEEEEE-------------cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEec--CCCCeEE
Q 014644 140 NINSISNNSDCETFVSA-------------DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHP--IYCNLLA 204 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~ 204 (421)
...+++..|+|..++++ .+|.|.++|.++.....+.+......+.........+.+.+ ++..+|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45566778888766665 58899999987332222222111100122334567777766 3422444
Q ss_pred EEE-c--CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec---------------
Q 014644 205 YSS-S--RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--------------- 266 (421)
Q Consensus 205 s~~-~--d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------------- 266 (421)
.+. . +.+|.+|++............+.. + .-...+.+.+.++|.+.++..
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g----~--------~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH----K--------LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECC----T--------TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEecccc----C--------CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 443 3 567888877653222111111111 0 124678999999999877753
Q ss_pred --C-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 267 --Y-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 267 --~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
. +.|.-+|. ++......+-..+ +.++|+||++.|+.+. ..+.|+.|++...
T Consensus 199 ~~~~g~vyr~d~---~~~~~~~~~l~~p----------------NGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 199 GLAWSFVTYYSP---NDVRVVAEGFDFA----------------NGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp TCCCEEEEEECT---TCCEEEEEEESSE----------------EEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred cCCccEEEEEEC---CeEEEeecCCccc----------------CcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 1 33444443 3222222222222 6899999998877665 5789999998743
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.26 E-value=0.019 Score=55.98 Aligned_cols=113 Identities=5% Similarity=-0.044 Sum_probs=66.9
Q ss_pred EEeecC-CCCEEEEE-cCC-----------cEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-c
Q 014644 143 SISNNS-DCETFVSA-DDL-----------RINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-S 208 (421)
Q Consensus 143 ~l~~~~-~~~~l~s~-~d~-----------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~ 208 (421)
..++.+ ++++++.| .+. .+.+||..++. -.....+. ..+.....++++.+++ ++++.|+ .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~----~~~~~~~~~~~~~~~g-~lyv~GG~~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTV----TKHDMFCPGISMDGNG-QIVVTGGND 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEE----CSCCCSSCEEEECTTS-CEEEECSSS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccC----CCCCCccccccCCCCC-CEEEeCCCC
Confidence 556666 88888886 432 58889987432 11111000 1223334467788888 8888888 4
Q ss_pred CCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--C-----CeEEEEECCC
Q 014644 209 RGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y-----MNLKLWDIRM 277 (421)
Q Consensus 209 d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~-----~~i~i~d~~~ 277 (421)
+..+.+||..+.+-... ..+. . ...-.+++..++|++++.|+ + ..+.+||..+
T Consensus 264 ~~~v~~yd~~t~~W~~~--~~~~------~--------~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPG--PDMQ------V--------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp TTCEEEEEGGGTEEEEC--CCCS------S--------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred CCceEEecCcCCceeEC--CCCC------c--------cccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 56899999887542200 0000 0 11223556667899888775 1 4689999875
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.26 E-value=0.15 Score=48.78 Aligned_cols=59 Identities=19% Similarity=0.139 Sum_probs=38.8
Q ss_pred CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe
Q 014644 268 MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~ 344 (421)
+.|..||+.+ ++.+-+....... ..-.....+.+++.|+.||.++.||.+++ +++-.++
T Consensus 466 G~l~A~D~~t-G~~~W~~~~~~~~----------------~~g~~~tagglvf~g~~dg~l~A~D~~tG-~~lW~~~ 524 (582)
T 1flg_A 466 GSLRAMDPVS-GKVVWEHKEHLPL----------------WAGVLATAGNLVFTGTGDGYFKAFDAKSG-KELWKFQ 524 (582)
T ss_dssp EEEEEECTTT-CCEEEEEEESSCC----------------CSCCEEETTTEEEEECTTSEEEEEETTTC-CEEEEEE
T ss_pred ceEEEEECCC-CCEEEEecCCCCC----------------cccceEeCCCEEEEECCCCcEEEEECCCC-CEEEEec
Confidence 7789999987 7776665543221 11111224667888999999999999998 4443443
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.19 E-value=0.098 Score=45.60 Aligned_cols=158 Identities=10% Similarity=0.018 Sum_probs=93.5
Q ss_pred cceEEEeecCCCCEE-EEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc-C-CeEEE
Q 014644 139 FNINSISNNSDCETF-VSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-R-GFVRL 214 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l-~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-d-~~v~i 214 (421)
.....+++.+.+..| ++- ..+.|.+.+++ +......+ .........++++|.+ ..|+.+.. . +.|..
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~-------~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------RENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKK 147 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT-SSSEEEEE-------ECTTCCEEEEEEETTT-TEEEEEECSSSCEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCC-CCceEEEE-------ECCCCCcceEEeCCCC-CEEEEEccCCCCeEEE
Confidence 446788888755444 454 78899999987 33222222 1122456899999976 55554443 2 67888
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeec-cCc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIH-EHL 291 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~-~~~ 291 (421)
.++..... ..+.. ..-.....++++|++..|..+. . +.|..+|+. +.....+... ...
T Consensus 148 ~~~dG~~~-----~~~~~------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d--g~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 148 GGLNGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTILEDEKRL 208 (316)
T ss_dssp EETTSCCE-----EEEEC------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEEECTTTT
T ss_pred EcCCCCCe-----EEEEE------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecC--CCceEEEeecCCcc
Confidence 88754221 11100 0023578999999877776654 4 899999986 3333333221 111
Q ss_pred ccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCC
Q 014644 292 RPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSA 338 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~ 338 (421)
. ...++++. .+....+-...+.|..++..++..
T Consensus 209 ~-------------~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 209 A-------------HPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp S-------------SEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred C-------------CcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 0 01467775 345555556678999999877633
No 285
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.19 E-value=0.11 Score=45.85 Aligned_cols=116 Identities=10% Similarity=0.058 Sum_probs=64.4
Q ss_pred CcceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC---CCCeEEEE-E--cCC
Q 014644 138 DFNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYS-S--SRG 210 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~-~--~d~ 210 (421)
-...+.++|.|||+++++- ..|.|++++.. .+....+..+ +............++++|+ + ..|+.. + .+.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~-~g~~~~v~~~-~~v~~~g~~GllGia~~Pdf~~~-g~lYv~yt~~~~~ 107 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAK-TGRKTELGEV-PGVSPSGEGGLLGIALSPDYASD-HMVYAYFTSASDN 107 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEEC-TTCCCBTTBSEEEEEECTTHHHH-CEEEEEEECSSSE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECC-CCcEeeeccc-CceeecCCCCceeeEeccccccC-CEEEEEEecCCCC
Confidence 4457899999999988888 59999999865 3332111111 1122334566899999995 2 334332 2 344
Q ss_pred eEEEEECCccc----ccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 211 FVRLVDMRQSA----LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 211 ~v~iwd~~~~~----~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
.|.-|.+..+. .......++.. .+ .........|+|.|||.+.++.
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~---~p------~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRG---IP------KGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEE---EC------CCSSCCCCCEEECTTSCEEEEC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEc---CC------CCCCccCccccCCCCCCEEEEE
Confidence 55556554421 01011111111 00 0112245789999999877764
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.16 E-value=0.15 Score=47.12 Aligned_cols=160 Identities=10% Similarity=0.051 Sum_probs=89.6
Q ss_pred ceEEEeecC-CCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEE-------ecCCCCeEEEEEcC
Q 014644 140 NINSISNNS-DCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEF-------HPIYCNLLAYSSSR 209 (421)
Q Consensus 140 ~v~~l~~~~-~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~p~~~~~l~s~~~d 209 (421)
....|+|.| +...|..+ ..+.|++.|++ .+....+.... .........++| ++++ ..|+.+...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~-~~~v~~l~~~~----~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~ 213 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLK-NRMLSSPLNIN----TIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDY 213 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETT-TTEEEEEECCT----TSSCSBEEEEEECCCBTTTBCTT-CEEEEEECC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECC-CCEEEEEEccC----ccccCCCcEEEEeecccccCCCC-CEEEEEeCC
Confidence 456889998 35555555 44678888887 44444333110 112345789999 9999 766666544
Q ss_pred C-------eEEEEECCc-ccccc-cchhhhccccccCCCcccccccccceeEEEEcCCCCEEEE-ecC-CeEEEEECC--
Q 014644 210 G-------FVRLVDMRQ-SALCD-HSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS-RDY-MNLKLWDIR-- 276 (421)
Q Consensus 210 ~-------~v~iwd~~~-~~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~-~~i~i~d~~-- 276 (421)
+ .|.+++... +.... .....+.. -.....++++|++..|.. ... +.|..+|+.
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~--------------~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~ 279 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIAA--------------YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDY 279 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE--------------ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHH
T ss_pred CCCcccCceEEEEecCCCCceeecccceeecc--------------CCCceEEEEcCCCCeEEEEECCCCEEEEEecccc
Confidence 3 255665333 12110 00001111 124568899996555554 444 889999986
Q ss_pred -----CCCcc-----------eeE-EeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCCeEEEEecC
Q 014644 277 -----MDSTP-----------VAT-FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSNLLRIFSHG 334 (421)
Q Consensus 277 -----~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg~i~iwd~~ 334 (421)
+ +.. ... +...... ..+.++|+|+|++|+.+ +....|+.++..
T Consensus 280 ~~~~~t-g~~~tp~~~~~~g~~~~l~~~~~~~--------------~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 280 FKTIKN-GGSWDPIVKNNPNTFKQLFTIADPS--------------WEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHHHHT-TCCCCCBGGGCTTTEEEEEECSSSS--------------CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccccC-ceeecccccccccccceeEecCCCC--------------CceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 3 322 112 2111111 01689999999965554 456788886654
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.14 E-value=0.19 Score=49.73 Aligned_cols=168 Identities=5% Similarity=-0.084 Sum_probs=93.1
Q ss_pred EEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhc
Q 014644 152 TFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILR 231 (421)
Q Consensus 152 ~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~ 231 (421)
+|+.+....|+..++. ......++ .....+..++|++.+..++++-...+.|+.+++...........++.
T Consensus 397 ~Ll~an~~~Ir~i~l~-~~~~~~l~--------~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLD-RSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EEEEECBSSEEEECTT-SCCCEEEE--------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred ccccccccceeEeecc-CCcceeee--------cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 5555555567877877 33322222 22355789999996624444444568888888865321000001111
Q ss_pred cccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeE
Q 014644 232 DAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFE 309 (421)
Q Consensus 232 ~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
. .......|++.+.++.|..+ .. +.|.+.++. +.....+...... ....
T Consensus 468 ~-------------~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld--G~~~~~l~~~~l~--------------~P~g 518 (791)
T 3m0c_C 468 R-------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKTLFRENGS--------------KPRA 518 (791)
T ss_dssp S-------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEEEEEECTTC--------------CEEE
T ss_pred c-------------CCCCcceeeeeecCCcEEEEecCCCeEEEEeCC--CCeEEEEEeCCCC--------------Ccce
Confidence 0 12456789999887666655 34 899999986 4444444322111 0168
Q ss_pred EEEcCCCCEEEEeeC--CCeEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 310 CSVSGDGLHFATGSY--SNLLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 310 ~~~sp~~~~l~~~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
+++.|.+.+|+.... .+.|...++... .....+...-...+.+++.+.
T Consensus 519 IaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 519 IVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLL 568 (791)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETT
T ss_pred EEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCCCCceEEEEecC
Confidence 999998666665543 367888887643 333333333345566676655
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.14 E-value=0.01 Score=58.16 Aligned_cols=155 Identities=10% Similarity=0.032 Sum_probs=85.1
Q ss_pred ceEEEeecCCC-CEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cC-CeEEEE
Q 014644 140 NINSISNNSDC-ETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SR-GFVRLV 215 (421)
Q Consensus 140 ~v~~l~~~~~~-~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-~~v~iw 215 (421)
....|++.+.+ .++++- ..+.|.+.++. +.....++ .........++++|.+ ..|+.+. .. +.|..+
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~d-g~~~~~l~-------~~~~~~P~giavDp~~-g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTK-GVKRKTLF-------REQGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSS-SCCEEEEC-------CCSSCCCCCEECCSSS-SCCEECCCSSSCCEEBC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecC-CCceEEEE-------eCCCCCcceEEEccCC-CcEEEcccCCCCeEEEE
Confidence 35667887544 444444 67889999987 33222222 1122345788899976 4444433 22 567766
Q ss_pred ECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeec-cCcc
Q 014644 216 DMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIH-EHLR 292 (421)
Q Consensus 216 d~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~-~~~~ 292 (421)
++..... ..+.. ..-...+.|+|+|++..|..+ .. +.|..+++. +.....+... ....
T Consensus 525 ~~dG~~~-----~~l~~------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d--G~~~~~~~~~~~~~~ 585 (699)
T 1n7d_A 525 GLNGVDI-----YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN--GGNRKTILEDEKRLA 585 (699)
T ss_dssp CSSSCCC-----CEESC------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS--SSCCEEECCCSSSCS
T ss_pred eCCCCCe-----eEEEe------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC--CCceEEEEecCCcCC
Confidence 6653211 11100 002356789999987666655 34 889999986 3323333211 1100
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
...++++..+ .++++....+.|..++..++
T Consensus 586 -------------~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 586 -------------HPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp -------------SCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred -------------CceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 0035666544 34445556788999987766
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.12 E-value=0.12 Score=45.13 Aligned_cols=166 Identities=9% Similarity=-0.007 Sum_probs=92.6
Q ss_pred EEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEEECCcccccccchhhh
Q 014644 152 TFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMRQSALCDHSARIL 230 (421)
Q Consensus 152 ~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~ 230 (421)
+|+.+....|+..+++......... .........++|++.+ ..|+.+ ...+.|..+++..+.... ..+
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~-------~~~~~~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~~~---~~~ 74 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIV-------VGGLEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTESVQ---NVV 74 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEE-------EEEEEEEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSCCC---EEE
T ss_pred EEEEEccCeEEEEECCCCceEEEEE-------ecCCCccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCceE---EEE
Confidence 5555655678889988432112111 1122346789999876 444444 466889888887642110 111
Q ss_pred ccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeee
Q 014644 231 RDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKF 308 (421)
Q Consensus 231 ~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (421)
.. .-.....+++.+.+..|... .. +.|.++++. +.....+...... ...
T Consensus 75 ~~-------------~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d--G~~~~~l~~~~~~--------------~P~ 125 (318)
T 3sov_A 75 VS-------------GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD--GSLRKVLFWQELD--------------QPR 125 (318)
T ss_dssp EE-------------CCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SCSCEEEECSSCS--------------SEE
T ss_pred cC-------------CCCCccEEEEEcCCCeEEEEECCCCEEEEEECC--CCcEEEEEeCCCC--------------Ccc
Confidence 11 02346789998755555444 44 889999986 3333333211110 016
Q ss_pred EEEEcCCCCEEEEee--CCCeEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 309 ECSVSGDGLHFATGS--YSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 309 ~~~~sp~~~~l~~~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
.+++.|.+..|+... ..+.|...++... .........-..-+.+++.++
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEETT
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCccEEEEecc
Confidence 899999766666555 3578888887643 222222333334466777765
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.12 E-value=0.1 Score=46.87 Aligned_cols=164 Identities=12% Similarity=0.093 Sum_probs=99.1
Q ss_pred ecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCc--cCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCccccc
Q 014644 146 NNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDD--LTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALC 223 (421)
Q Consensus 146 ~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~ 223 (421)
...+|..++.+.++.||.-++.. +..++.+.. +. --..|..+..+|+| .+||..+ +..|.|-.+..+...
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~-~~~Yk~L~~-----~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLT-DSLYHSLNF-----SRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSN 99 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTT-CSSCEEEEC-----TTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSC
T ss_pred EEcCCCEEEEEECCEEEEEECCC-CCcceEEec-----CcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCcccc
Confidence 35578888888889999999873 335666532 21 11257889999999 8887764 568999998843211
Q ss_pred cc------chh--hhccccccCCCcccccccccceeEEEEcCC---CCEEEEe-cCCeEEEEECCCC-CcceeEEeeccC
Q 014644 224 DH------SAR--ILRDAAESHGSKSFFTEIIASISDIKFAND---GQHLLSR-DYMNLKLWDIRMD-STPVATFKIHEH 290 (421)
Q Consensus 224 ~~------~~~--~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~-~~~~i~i~d~~~~-~~~~~~~~~~~~ 290 (421)
.. ..+ .+.. ++ +......+|..+.|+|- +..|++- +++.|++||+... .++. .+.....
T Consensus 100 ~~~~~~~~~~q~~ty~l---~~----~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~ 171 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSI---DE----EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNN 171 (452)
T ss_dssp CCCHHHHHTTEEEEEEG---GG----CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCS
T ss_pred CcccccccccceeEEEc---CC----cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhcccc
Confidence 10 000 1111 00 00112578999999995 3355554 5599999999752 2333 3321110
Q ss_pred cccccccccCCCcceeeeEEEEcCCCCEEEEee--CCCeEEEE
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS--YSNLLRIF 331 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s--~dg~i~iw 331 (421)
. ....+.+.++.+++|.+++-.|...+ ++|.|+-.
T Consensus 172 ---~---fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 172 ---S---FGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ---E---EESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ---c---cCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 0 00112224568999999988777755 88888753
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.10 E-value=0.13 Score=45.15 Aligned_cols=229 Identities=9% Similarity=0.031 Sum_probs=112.2
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECC
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMR 218 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~ 218 (421)
..+.++.+.+ +..++.+.++.|.. ..+ .++..+.... ...+...+..+.+.+++ ..++. +.++.| |...
T Consensus 80 ~~~~~i~~~~-~~~~~~g~~g~i~~-S~D-gG~tW~~~~~----~~~~~~~~~~i~~~~~~-~~~~~-~~~g~v--~~S~ 148 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWIVGEPPIMLH-TTD-GGQSWSQIPL----DPKLPGSPRLIKALGNG-SAEMI-TNVGAI--YRTK 148 (327)
T ss_dssp CEEEEEEEET-TEEEEEEETTEEEE-ESS-TTSSCEECCC----CTTCSSCEEEEEEEETT-EEEEE-ETTCCE--EEES
T ss_pred ccEEEEEecC-CeEEEEECCCeEEE-ECC-CCCCceECcc----ccCCCCCeEEEEEECCC-CEEEE-eCCccE--EEEc
Confidence 3577788876 55555556665443 333 3444443210 01233456778877766 55554 445643 2222
Q ss_pred cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEE-EEECCCCCcceeEEeeccCccccccc
Q 014644 219 QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLK-LWDIRMDSTPVATFKIHEHLRPKLCD 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
.+. ..|.. ... .....+..+.+.|++.+++.+..+.+. -.|-. +..-..+......
T Consensus 149 DgG------~tW~~-~~~--------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g--G~tW~~~~~~~~~------ 205 (327)
T 2xbg_A 149 DSG------KNWQA-LVQ--------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG--QTAWEPHNRTTSR------ 205 (327)
T ss_dssp STT------SSEEE-EEC--------SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT--CSSCEEEECCSSS------
T ss_pred CCC------CCCEE-eec--------CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC--CCceeECCCCCCC------
Confidence 211 12222 000 113467889999999988888665443 34421 2222222211110
Q ss_pred ccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCCCceeEEe-c---CCCCccceeeecCCcccccccceeeeec
Q 014644 298 LYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVE-A---GKNENRKPILQAAPRARRSSLSNLTRGL 373 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 373 (421)
.+..+.+.++++.++ .+.+|.+++.+.+.+ ..-..+. . ....+..+.+.++ +. .++.+.
T Consensus 206 --------~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G-~tW~~~~~~~~~~~~~~~~v~~~~~--~~-----~~~~g~ 268 (327)
T 2xbg_A 206 --------RLHNMGFTPDGRLWM-IVNGGKIAFSDPDNS-ENWGELLSPLRRNSVGFLDLAYRTP--NE-----VWLAGG 268 (327)
T ss_dssp --------CEEEEEECTTSCEEE-EETTTEEEEEETTEE-EEECCCBCTTSSCCSCEEEEEESSS--SC-----EEEEES
T ss_pred --------ccceeEECCCCCEEE-EeCCceEEEecCCCC-CeeEeccCCcccCCcceEEEEecCC--CE-----EEEEeC
Confidence 126788899887654 556788877642212 1111111 1 1123445555543 22 444443
Q ss_pred ccCcccC-CCCCcccc----ccccccCeEEEEEccCCCeEEEecCCceEEE
Q 014644 374 YRQAHEN-SSSGHHEL----SYNLSSKLLHLAWHPTTNLIACANGNSLFFH 419 (421)
Q Consensus 374 ~d~~~iw-~~~~~~~~----~~~~~~~v~~~~~spd~~~la~~~~~~~~i~ 419 (421)
++.-++ ..++..-. .......+.++.|.+++..+++|.++.++-+
T Consensus 269 -~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 269 -AGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRY 318 (327)
T ss_dssp -TTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEE
T ss_pred -CCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEE
Confidence 332111 11111111 1122356788899888887777777776654
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.07 E-value=0.029 Score=51.90 Aligned_cols=116 Identities=13% Similarity=0.082 Sum_probs=68.2
Q ss_pred CeeEEEEecC-CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEE-------cCCCC
Q 014644 189 VITSAEFHPI-YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF-------ANDGQ 260 (421)
Q Consensus 189 ~v~~~~~~p~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~-------s~~~~ 260 (421)
....|+|+|. +.+++++....+.|++.|+..+.+. .+... . .........++| +++|+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~----~l~~~---~-------~~~~~~p~~ia~~~~~~~~d~~G~ 205 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS----SPLNI---N-------TIPTNRIRSIAFNKKIEGYADEAE 205 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE----EEECC---T-------TSSCSBEEEEEECCCBTTTBCTTC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE----EEEcc---C-------ccccCCCcEEEEeecccccCCCCC
Confidence 4678999993 4144444444477999998876543 11111 0 001235789999 99999
Q ss_pred EEEEecC-C-------eEEEEECCCCCcce-----eEEeeccCcccccccccCCCcceeeeEEEEcCC-CCEEEEeeCCC
Q 014644 261 HLLSRDY-M-------NLKLWDIRMDSTPV-----ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD-GLHFATGSYSN 326 (421)
Q Consensus 261 ~l~~~~~-~-------~i~i~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~~s~dg 326 (421)
+|+.+.+ + .|.+++....+... ..+.....+ ..++++|+ +.++++-..++
T Consensus 206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p----------------~giavdp~~g~LYvtd~~~g 269 (496)
T 3kya_A 206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQC----------------NGATIHPINGELYFNSYEKG 269 (496)
T ss_dssp EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCC----------------CCEEECTTTCCEEEEETTTT
T ss_pred EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCc----------------eEEEEcCCCCeEEEEECCCC
Confidence 6666544 3 26666643212321 222221221 47899995 55455566788
Q ss_pred eEEEEecC
Q 014644 327 LLRIFSHG 334 (421)
Q Consensus 327 ~i~iwd~~ 334 (421)
.|+.+|+.
T Consensus 270 ~V~r~d~~ 277 (496)
T 3kya_A 270 QVFRLDLV 277 (496)
T ss_dssp EEEEECHH
T ss_pred EEEEEecc
Confidence 89999987
No 293
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.95 E-value=0.17 Score=44.10 Aligned_cols=167 Identities=6% Similarity=-0.058 Sum_probs=91.2
Q ss_pred EEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE-EcCCeEEEEECCcccccccchhhh
Q 014644 152 TFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS-SSRGFVRLVDMRQSALCDHSARIL 230 (421)
Q Consensus 152 ~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~~~~ 230 (421)
+|+.+....|+..|+. ......++ . ....+.+++|++.+ ..|+.+ ..++.|..+++............+
T Consensus 3 ~ll~~~~~~I~~i~~~-~~~~~~~~-------~-~~~~p~g~~~d~~~-~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~ 72 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLD-RSEYTSLI-------P-NLRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDTVI 72 (316)
T ss_dssp EEEEECBSSEEEEETT-SCCCEEEE-------C-SCSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEEEE
T ss_pred EEEEECCCeEEEEECC-CcceEehh-------c-CCCceEEEEEEeCC-CEEEEEECCCCcEEEEECCCCCCCcccEEEE
Confidence 4566655578889988 33333332 1 23457899999976 555544 456899999987521000000111
Q ss_pred ccccccCCCcccccccccceeEEEEcCCCCEEEEe-cC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeee
Q 014644 231 RDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR-DY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKF 308 (421)
Q Consensus 231 ~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (421)
.. .-.....+++++.+..|... .. +.|.++++. +.....+...... ...
T Consensus 73 ~~-------------~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~--g~~~~~~~~~~~~--------------~P~ 123 (316)
T 1ijq_A 73 SR-------------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--GVKRKTLFRENGS--------------KPR 123 (316)
T ss_dssp CS-------------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--SSSEEEEEECTTC--------------CEE
T ss_pred eC-------------CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC--CCceEEEEECCCC--------------Ccc
Confidence 11 01345789998755555444 44 899999986 3333333221110 016
Q ss_pred EEEEcCCCCEEEEeeC-C-CeEEEEecCCCCCceeEEecCCCCccceeeecC
Q 014644 309 ECSVSGDGLHFATGSY-S-NLLRIFSHGVGSAGGITVEAGKNENRKPILQAA 358 (421)
Q Consensus 309 ~~~~sp~~~~l~~~s~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (421)
.++++|.+..|+.... . +.|...++... .........-...+.+++.++
T Consensus 124 ~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~ 174 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLL 174 (316)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETT
T ss_pred eEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEecc
Confidence 8999997666655543 2 68888887633 222222223344556777765
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.93 E-value=0.079 Score=45.96 Aligned_cols=122 Identities=12% Similarity=0.061 Sum_probs=74.3
Q ss_pred eEEEee---cCCCCEEEEEc--------------CCcEEEEeCC---CCceeeeeeecCCCCCCc-------cCCCeeEE
Q 014644 141 INSISN---NSDCETFVSAD--------------DLRINLWNLE---ISDQCFNIVDMKPSNMDD-------LTEVITSA 193 (421)
Q Consensus 141 v~~l~~---~~~~~~l~s~~--------------d~~i~lwd~~---~~~~~~~~~~~~~~~~~~-------~~~~v~~~ 193 (421)
+..|.| .|+++++++.+ +..|..+|+. +.. .+...++... ..+ -......+
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~-~~~~~dL~~~-~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSK-PVWSVNFEKV-QDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCC-CSEEEESHHH-HHHHHHHHSSCCEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCC-EEEEecCccc-cccccccccccccCCcee
Confidence 467777 57776666542 5778889987 333 3332321100 000 11247889
Q ss_pred EEecCCCCeEEEEEcC-CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC-CeEE
Q 014644 194 EFHPIYCNLLAYSSSR-GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY-MNLK 271 (421)
Q Consensus 194 ~~~p~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~i~ 271 (421)
+..++| +..++++.. +.|...+...... ..+.. .... .......+.|+++|+|..|++... +.|.
T Consensus 143 avD~~G-naYVt~s~~~~~I~rV~pdG~~~-----~~~~~-~~~~------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~ 209 (334)
T 2p9w_A 143 AQDRDG-NSYVAFALGMPAIARVSADGKTV-----STFAW-ESGN------GGQRPGYSGITFDPHSNKLIAFGGPRALT 209 (334)
T ss_dssp EECTTS-CEEEEEEESSCEEEEECTTSCCE-----EEEEE-CCCC------SSSCCSCSEEEEETTTTEEEEESSSSSEE
T ss_pred EECCCC-CEEEeCCCCCCeEEEEeCCCCEE-----eeeee-cCCC------cccccCcceEEEeCCCCEEEEEcCCCeEE
Confidence 999999 888888888 8877777654321 11211 0000 001234679999999998888755 9999
Q ss_pred EEECCC
Q 014644 272 LWDIRM 277 (421)
Q Consensus 272 i~d~~~ 277 (421)
.+|++.
T Consensus 210 ~fD~~~ 215 (334)
T 2p9w_A 210 AFDVSK 215 (334)
T ss_dssp EEECSS
T ss_pred EEcCCC
Confidence 999874
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.90 E-value=0.19 Score=43.97 Aligned_cols=147 Identities=9% Similarity=0.190 Sum_probs=84.0
Q ss_pred CCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC----CCC--eEEEEE-c--CCeEEEEECC-
Q 014644 150 CETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI----YCN--LLAYSS-S--RGFVRLVDMR- 218 (421)
Q Consensus 150 ~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~--~l~s~~-~--d~~v~iwd~~- 218 (421)
..+++.. ..+-+.+||+. ++.+..+ .. +.+..+..-|+ +.. ++++.. . +.+|++|++.
T Consensus 40 ~s~ii~t~k~~gL~Vydl~--G~~l~~~-------~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSLD--GKMLHSY-------NT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp GCEEEEEETTTEEEEEETT--SCEEEEE-------CC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred ccEEEEEcCCCCEEEEcCC--CcEEEEc-------cC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 3445554 77899999996 5555544 21 44566655552 201 233333 3 5799999774
Q ss_pred -cccccccchhhhccccccCCCcccccccccceeEEEE--cCC-CC-EEEEecC-CeEEEEECCC------CCcceeEEe
Q 014644 219 -QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF--AND-GQ-HLLSRDY-MNLKLWDIRM------DSTPVATFK 286 (421)
Q Consensus 219 -~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~--s~~-~~-~l~~~~~-~~i~i~d~~~------~~~~~~~~~ 286 (421)
++.+ ..+.. ...+ +......+..+++ +|. ++ +++.... +.+..|++.. ..+.+.++.
T Consensus 109 ~~~~l-----~~i~~-~~~p-----v~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 109 KNGTL-----QSMTD-PDHP-----IATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp TTCCE-----EECSC-TTSC-----EECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCCce-----eeccc-cccC-----cCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 3221 11110 0000 0000145677888 774 54 4444444 8999988832 134566666
Q ss_pred eccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecC
Q 014644 287 IHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHG 334 (421)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~ 334 (421)
..... ..|...+....|+.+-++..|..++.+
T Consensus 178 lgsq~----------------EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 178 MNSQT----------------EGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp CSSCE----------------EEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred CCCCc----------------ceEEEcCCCCeEEEecccceEEEEeCC
Confidence 55433 578888888899999998777666654
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.87 E-value=0.076 Score=47.17 Aligned_cols=113 Identities=14% Similarity=0.076 Sum_probs=61.9
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC---CCCeEEEEEc---C---
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSS---R--- 209 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~---d--- 209 (421)
.....++|.|+|+++++-.++.|++++.. +. ..+..+. ...........++++|+ +..+.++-+. +
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~--G~-~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPS--GK-KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSS--CE-EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCC--Cc-eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45689999999987666666999998743 33 1111111 11222356789999997 4144443332 3
Q ss_pred -CeEEEEECCcccc-cccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 210 -GFVRLVDMRQSAL-CDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 210 -~~v~iwd~~~~~~-~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
..|..|+...... ......++.. .+ .........++|.|||.+.++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~---~~------~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDG---IP------GAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEE---EE------CCSSCCCCCEEECTTSCEEEEC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEc---CC------CCCCcCCceEEECCCCcEEEEE
Confidence 5677777654310 0000011111 00 0001234689999999877764
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.84 E-value=0.25 Score=44.37 Aligned_cols=117 Identities=7% Similarity=0.018 Sum_probs=71.3
Q ss_pred ecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEEC
Q 014644 196 HPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDI 275 (421)
Q Consensus 196 ~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~ 275 (421)
..++ ..++.+ .++.||..++..+.. .+.+.. +.. -.-..+..+..+|+|++||..+...|.|..+
T Consensus 29 ~~n~-t~i~~a-~~n~iR~~~i~~~~~----Yk~L~~----~~~-----i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~L 93 (452)
T 3pbp_A 29 SQNG-TRIVFI-QDNIIRWYNVLTDSL----YHSLNF----SRH-----LVLDDTFHVISSTSGDLLCLFNDNEIFVMEV 93 (452)
T ss_dssp ETTT-TEEEEE-ETTEEEEEETTTCSS----CEEEEC----TTT-----CCCCTTCEEEECTTSSEEEEECSSEEEEEEC
T ss_pred EcCC-CEEEEE-ECCEEEEEECCCCCc----ceEEec----Ccc-----cccCceeEEEECCCCCEEEEecCCeEEEEEe
Confidence 4455 555544 457888888774321 123222 000 0012577899999999999988789999998
Q ss_pred CCCCcc-----------eeEEeeccCcccccccccCCCcceeeeEEEEcCC---CCEEEEeeCCCeEEEEecCCC
Q 014644 276 RMDSTP-----------VATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD---GLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 276 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---~~~l~~~s~dg~i~iwd~~~~ 336 (421)
...... .+.+...... ...--.|..+-|+|- +..|++-..|+.|++||+...
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~---------~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEE---------VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC-----------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cCccccCcccccccccceeEEEcCCcc---------cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 631111 1122221100 000112478999994 668999999999999999864
No 298
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.79 E-value=0.28 Score=44.29 Aligned_cols=159 Identities=9% Similarity=-0.038 Sum_probs=96.2
Q ss_pred CcceEEEeecCCCCEEEEE--cCCcEEEEeCCCCc---eeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeE
Q 014644 138 DFNINSISNNSDCETFVSA--DDLRINLWNLEISD---QCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 212 (421)
Q Consensus 138 ~~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v 212 (421)
...+..++|.+.+..|.-+ ..+.|+.+++.... .....+ .........+++.+.+.++.++-...+.|
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-------~~~~~~p~glavD~~~~~lY~~d~~~~~I 183 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------SRDIQAPDGLAVDWIHSNIYWTDSVLGTV 183 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-------CSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-------eCCCCCcccEEEEecCCceEEEECCCCeE
Confidence 4567899999866655554 67889999887311 112221 22234578899998552455555567889
Q ss_pred EEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--C-CeEEEEECCCCCcceeEEeecc
Q 014644 213 RLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y-MNLKLWDIRMDSTPVATFKIHE 289 (421)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~-~~i~i~d~~~~~~~~~~~~~~~ 289 (421)
.+.++...... ..+.. .-.....|++.|.+.+|.... . +.|...++. +.....+....
T Consensus 184 ~~~~~~g~~~~----~l~~~-------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~~~~~~~~~~ 244 (400)
T 3p5b_L 184 SVADTKGVKRK----TLFRE-------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVTEN 244 (400)
T ss_dssp EEECTTTCSEE----EEEEC-------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT--SCSCEEEECSS
T ss_pred EEEeCCCCceE----EEEeC-------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC--CCccEEEEECC
Confidence 99888754311 11111 123578999999766665543 2 678888875 44333332211
Q ss_pred CcccccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
-. ....++++|++..|+.+. ..+.|...|+...
T Consensus 245 l~--------------~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 245 IQ--------------WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp CS--------------CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CC--------------ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 00 116899999877776664 4678999998744
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.78 E-value=0.42 Score=46.04 Aligned_cols=154 Identities=8% Similarity=0.005 Sum_probs=92.4
Q ss_pred cceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc--CCeEEE
Q 014644 139 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRL 214 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d~~v~i 214 (421)
.....+++.+.+..|..+ ..+.|.+.+++ +.. .+.+. .........+++.|.. ..|+.+.. .+.|..
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d-G~~-~~~l~------~~~l~~P~~iavdp~~-G~lY~tD~g~~~~I~r 150 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLD-GQH-RQVLV------WKDLDSPRALALDPAE-GFMYWTEWGGKPKIDR 150 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT-STT-CEEEE------CSSCCCEEEEEEETTT-TEEEEEECSSSCEEEE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecC-CCc-EEEEE------eCCCCCcccEEEccCC-CeEEEeCCCCCCEEEE
Confidence 356778888766655554 67889999987 332 22221 1223456899999965 55555542 467777
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEeeccCcc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKIHEHLR 292 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~~~~~~ 292 (421)
.++...... .+... -.....++++++++.|..+. . +.|..+|+.. ... ..+...-...
T Consensus 151 ~~~dG~~~~----~l~~~--------------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-~~~-~v~~~~l~~P 210 (628)
T 4a0p_A 151 AAMDGSERT----TLVPN--------------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG-LNR-EVIADDLPHP 210 (628)
T ss_dssp EETTSCSCE----EEECS--------------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSC-EEEEECCSCE
T ss_pred EeCCCCceE----EEECC--------------CCCcceEEEccccCEEEEEECCCCEEEEEcCCC-Cce-EEeeccCCCc
Confidence 777653211 11111 34678999999877777664 3 8899999864 222 3332211111
Q ss_pred cccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC
Q 014644 293 PKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
.++++.. +....+-...+.|...|..++.
T Consensus 211 ---------------~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 211 ---------------FGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp ---------------EEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred ---------------eEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 4677754 3444444457889888877763
No 300
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.75 E-value=0.41 Score=45.63 Aligned_cols=30 Identities=17% Similarity=0.104 Sum_probs=22.0
Q ss_pred CCCC---EEEEecC-CeEEEEECCCCCcceeEEee
Q 014644 257 NDGQ---HLLSRDY-MNLKLWDIRMDSTPVATFKI 287 (421)
Q Consensus 257 ~~~~---~l~~~~~-~~i~i~d~~~~~~~~~~~~~ 287 (421)
.+|+ .++.++. |.++++|.++ ++++..+..
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~~ 364 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSN-GKLQNAFPF 364 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTT-CCEEEEEES
T ss_pred CCCCEEEEEEEECCCceEEEEECCC-CCEeccccc
Confidence 4674 5666765 9999999987 877766544
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.73 E-value=0.45 Score=45.73 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=90.3
Q ss_pred cceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc--CCeEEE
Q 014644 139 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS--RGFVRL 214 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d~~v~i 214 (421)
.....+++.+.+..|..+ ..+.|.+.+++ +. ..+++. .........+++.|.+ ..|+.+.. .+.|..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d-G~-~~~~l~------~~~l~~P~~Iavdp~~-g~ly~tD~g~~~~I~r 154 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLD-GS-LRKVLF------WQELDQPRAIALDPSS-GFMYWTDWGEVPKIER 154 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT-SC-SCEEEE------CSSCSCCCCEEEETTT-TEEEEEECSSSCEEEE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECC-CC-CEEEEE------eCCCCCCceEEEecCC-CeEEEeccCCCCEEEE
Confidence 467889999866655554 68899999998 33 222221 1223456789999976 55555543 356666
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec-C-CeEEEEECCCCCcceeEEee--ccC
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD-Y-MNLKLWDIRMDSTPVATFKI--HEH 290 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~-~~i~i~d~~~~~~~~~~~~~--~~~ 290 (421)
.++...... ..... .-...+.+++++++..|..+. . +.|..+|+. +.....+.. ...
T Consensus 155 ~~~dG~~~~----~l~~~-------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d--G~~~~~~~~~~~~~ 215 (619)
T 3s94_A 155 AGMDGSSRF----IIINS-------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD--GTNRQAVVKGSLPH 215 (619)
T ss_dssp EETTSCSCE----EEECS-------------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSS--CCEEC---------
T ss_pred EECCCCceE----EEEeC-------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC--CCccEEEEeCCCCC
Confidence 666542211 11110 123578999999877776654 3 788888886 332222211 111
Q ss_pred cccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCCC
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
+ .++++..+ ....+-...+.|...|..++.
T Consensus 216 P----------------~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 216 P----------------FALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp C----------------CCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred c----------------eEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 1 46777655 334444457788888887763
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.64 E-value=0.028 Score=55.00 Aligned_cols=157 Identities=9% Similarity=-0.038 Sum_probs=89.9
Q ss_pred cceEEEeecCCCCEEEEE--cCCcEEEEeCCCC---ceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEE
Q 014644 139 FNINSISNNSDCETFVSA--DDLRINLWNLEIS---DQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVR 213 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~ 213 (421)
..+..++|.+.+..|..+ ..+.|+.+++... ......+ .........+++.+.+.+++++-...+.|.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-------~~~~~~P~glavD~~~g~LY~tD~~~~~I~ 478 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 478 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-------CSCC--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-------eCCCCCcceEEEEeeCCcEEEEeccCCeEE
Confidence 356788999877666665 6788999998731 1111111 111223567888865525555545668899
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--C-CeEEEEECCCCCcceeEEeeccC
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y-MNLKLWDIRMDSTPVATFKIHEH 290 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~-~~i~i~d~~~~~~~~~~~~~~~~ 290 (421)
++++...... .++.. .......++++|.+.+|+.+. . +.|..+++. +.....+.....
T Consensus 479 v~d~dg~~~~----~l~~~-------------~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d--G~~~~~l~~~~l 539 (699)
T 1n7d_A 479 VADTKGVKRK----TLFRE-------------QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVTENI 539 (699)
T ss_dssp EEBSSSCCEE----EECCC-------------SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS--SCCCCEESCSSC
T ss_pred EEecCCCceE----EEEeC-------------CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC--CCCeeEEEeCCC
Confidence 9987654211 11111 023457889999766555543 2 567777765 333322211111
Q ss_pred cccccccccCCCcceeeeEEEEcCCCCEEEEe-eCCCeEEEEecCC
Q 014644 291 LRPKLCDLYNNDSIFDKFECSVSGDGLHFATG-SYSNLLRIFSHGV 335 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~-s~dg~i~iwd~~~ 335 (421)
. ....++|+|++..|+.+ +..+.|..+++..
T Consensus 540 ~--------------~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 540 Q--------------WPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp S--------------SCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred C--------------CccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 0 01589999976555544 4567899999874
No 303
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.51 E-value=0.22 Score=45.84 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=61.7
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCC-CCccCCCeeEEEEecC---CCCeEEEEEc-----
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSN-MDDLTEVITSAEFHPI---YCNLLAYSSS----- 208 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~---~~~~l~s~~~----- 208 (421)
.....|+|.|+|+++++- ..+.|++++.. .+....+..+.... .......+..++|+|+ +..+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPE-SGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTT-TCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECC-CCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 356799999999988887 44578888764 23322222211100 0113456789999995 4134343332
Q ss_pred -------CCeEEEEECCccc-ccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec
Q 014644 209 -------RGFVRLVDMRQSA-LCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 209 -------d~~v~iwd~~~~~-~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
...|.-+++.... .......++.. .+ .........|+|.|||.+.++..
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~---~p------~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAG---LP------SSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEE---EC------CCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEc---CC------CCCCCCCCeEeECCCCeEEEEEC
Confidence 1245555543221 01111112211 00 00123568999999998777643
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.47 E-value=0.37 Score=41.61 Aligned_cols=239 Identities=8% Similarity=0.059 Sum_probs=128.8
Q ss_pred cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecc
Q 014644 44 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 123 (421)
Q Consensus 44 ~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 123 (421)
+|....+|.=+ ..++.++|+++.+ ++.....+++|.-..|..++.- -+. +...+.-|+++.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~--klks~~~~e~VvfWkWis~~~L-----------~lV-----T~taVyHWs~~~ 135 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKS--KMKAHTMTDDVTFWKWISLNTV-----------ALV-----TDNAVYHWSMEG 135 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTE--EEEEEECSSCEEEEEECSSSEE-----------EEE-----ESSEEEEEESST
T ss_pred CCCccEEEEec-CCeEEEechHHhh--hhcceecCCccEEEEecCCCeE-----------EEE-----cCCcEEEEcccC
Confidence 57777777766 6789999999876 3333334455443333322111 111 123467788765
Q ss_pred cceeeeeeeecCCCC----cceEEEeecCCCCEEEE-E---c----CCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 124 SVHARCQKVYPHAHD----FNINSISNNSDCETFVS-A---D----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 124 ~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~s-~---~----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
...+.+.+ ..|. ..|..-..+++.++++. | . .|.+.||..+ .+.-+.+ ++|.+.-.
T Consensus 136 --~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e--r~~sQ~i-------eGhaa~F~ 203 (365)
T 2xzh_A 136 --ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPI-------EGHAASFA 203 (365)
T ss_dssp --TCCCEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT--TTEEEEE-------CCSEEEEE
T ss_pred --CCCCceee-ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec--cccccee-------eeeeeeeE
Confidence 23677777 4543 35667777899998775 3 2 4678999988 2223332 56654332
Q ss_pred EEEEe--cCCCCeEEEEEcC---CeEEEEECCccc-ccccc-hhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 192 SAEFH--PIYCNLLAYSSSR---GFVRLVDMRQSA-LCDHS-ARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 192 ~~~~~--p~~~~~l~s~~~d---~~v~iwd~~~~~-~~~~~-~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
.+.+. +...++++.+... +.+++.++.... ..... .+..+. ..++ ....+-.-++..++.-..+..
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi-~fpp------ea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV-FFPP------EAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEE-CCCT------TCTTCCEEEEEEETTTTEEEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccccccee-eCCc------cccCCceEEEEecccCCEEEE
Confidence 22221 1111244444432 588888885431 00000 011111 0011 111334456777776666665
Q ss_pred ecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 265 RDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 265 ~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
-+. |.|++||+.+ +.++..-+.....+ +-.+-.....-++.....|.|.--.++..
T Consensus 277 iTK~G~ihlyDleT-gt~i~~nrIS~d~i---------------F~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 277 ITKYGYIHLYDLET-GTCIYMNRISGETI---------------FVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EETTSEEEEEETTT-CCEEEEEECCSSCE---------------EEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EeCCcEEEEEEccc-CcEEEEeccCCCce---------------EEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 555 9999999998 88877665544432 23333333333445557777766666654
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.47 E-value=0.4 Score=41.92 Aligned_cols=160 Identities=9% Similarity=0.002 Sum_probs=89.1
Q ss_pred CCCcceEEEeecCCCCEEEEEcCCcEE-EEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEE
Q 014644 136 AHDFNINSISNNSDCETFVSADDLRIN-LWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRL 214 (421)
Q Consensus 136 ~h~~~v~~l~~~~~~~~l~s~~d~~i~-lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~i 214 (421)
.+...+..+++.+++.+++.+.++.+. -+|- .+.....+. ......+..+.+.+++ ..+ .++.+|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~--gG~tW~~~~------~~~~~~~~~~~~~~~g-~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP--GQTAWEPHN------RTTSRRLHNMGFTPDG-RLW-MIVNGGKIAF 229 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECT--TCSSCEEEE------CCSSSCEEEEEECTTS-CEE-EEETTTEEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC--CCCceeECC------CCCCCccceeEECCCC-CEE-EEeCCceEEE
Confidence 445678899999999998888555443 3332 133333221 2234568889999987 544 5567888777
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccc
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPK 294 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~ 294 (421)
.+...+.. |.. ...+. + .....+..+.+.+++..++++.++.+ .+..+. ++.-..+.......
T Consensus 230 s~~D~G~t-------W~~-~~~~~----~-~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~Dg-G~tW~~~~~~~~~~-- 292 (327)
T 2xbg_A 230 SDPDNSEN-------WGE-LLSPL----R-RNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDG-GQTWQQDVDVKKVP-- 292 (327)
T ss_dssp EETTEEEE-------ECC-CBCTT----S-SCCSCEEEEEESSSSCEEEEESTTCE-EEESST-TSSCEECGGGTTSS--
T ss_pred ecCCCCCe-------eEe-ccCCc----c-cCCcceEEEEecCCCEEEEEeCCCeE-EEeCCC-CcccEEcCccCCCC--
Confidence 65333321 111 00000 0 00235788999998888888877666 333332 43333332111000
Q ss_pred cccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEec
Q 014644 295 LCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSH 333 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~ 333 (421)
. .+.++.|.++++ +++++.+|.|.-++-
T Consensus 293 -------~---~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 293 -------S---NFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp -------S---CCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred -------C---CeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 0 115788876655 555667888776653
No 306
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.38 E-value=0.74 Score=44.00 Aligned_cols=85 Identities=13% Similarity=0.017 Sum_probs=46.7
Q ss_pred EEEEecCCCCeEEEEEcC----------------CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEE
Q 014644 192 SAEFHPIYCNLLAYSSSR----------------GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKF 255 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~ 255 (421)
.+++.+.. .+++.+..+ +.|..+|..+++..-.. +. .+...--+.....++. +..
T Consensus 245 ~~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~----q~---~~~d~wd~d~~~~p~l-~d~ 315 (599)
T 1w6s_A 245 WYAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY----QK---TPHDEWDYAGVNVMML-SEQ 315 (599)
T ss_dssp CCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE----ES---STTCSSCCCCCCCCEE-EEE
T ss_pred ceeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe----ec---CCCccccccCCCccEE-Eec
Confidence 45667776 777777655 37899999988753211 11 0000000000111121 222
Q ss_pred c-CCC---CEEEEecC-CeEEEEECCCCCcceeEEe
Q 014644 256 A-NDG---QHLLSRDY-MNLKLWDIRMDSTPVATFK 286 (421)
Q Consensus 256 s-~~~---~~l~~~~~-~~i~i~d~~~~~~~~~~~~ 286 (421)
. .+| +.++.++. |.++++|.++ ++++....
T Consensus 316 ~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~ 350 (599)
T 1w6s_A 316 KDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSANK 350 (599)
T ss_dssp ECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred cccCCcEEEEEEEECCCcEEEEEECCC-CCEeeccc
Confidence 2 467 45666655 9999999987 87766554
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.30 E-value=1.3 Score=46.01 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=30.5
Q ss_pred cccccccEEEEEEEEcCC----CCeEEEEeC-CCcEEEeecCCce
Q 014644 29 SLEIEEKINRVRWCAAPN----GSMFILSTN-DKTIKLWKVRDQK 68 (421)
Q Consensus 29 ~~~h~~~V~~v~~~~~~~----~~~l~t~s~-d~~v~lwd~~~~~ 68 (421)
.......|.|+++.+.++ +.+++.|.. |++|+|+++.+-+
T Consensus 549 ~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 549 HTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp EEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred ccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 344567899999954333 478999996 9999999998755
No 308
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.29 E-value=0.2 Score=44.36 Aligned_cols=117 Identities=8% Similarity=0.007 Sum_probs=59.4
Q ss_pred ceEEEeecCCCC-EEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecC---CCCeEEEEEc-------
Q 014644 140 NINSISNNSDCE-TFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPI---YCNLLAYSSS------- 208 (421)
Q Consensus 140 ~v~~l~~~~~~~-~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~------- 208 (421)
....++|.|+|+ ++++-..+.|++++.. +.....+...+............++|+|+ +..+.++-+.
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~--g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG--KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT--TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC--CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 467999999999 6666577899998854 32221111000111122345689999995 4144443332
Q ss_pred CCeEEEEECCcccc-cccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEe
Q 014644 209 RGFVRLVDMRQSAL-CDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSR 265 (421)
Q Consensus 209 d~~v~iwd~~~~~~-~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (421)
...|..+++..... ......++.. .+. ..........++|.|||.+.++.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~---~p~----~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQ---MPK----LSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEEC---SSC----CBSSSCCCCCEEECSSSEEEEEE
T ss_pred eeEEEEEEECCCCCCCCceEEEEEE---CCC----CCCCcccCccEEECCCCcEEEEE
Confidence 23566666543210 0000011111 000 00001234679999999766664
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.87 E-value=0.86 Score=40.20 Aligned_cols=137 Identities=10% Similarity=0.094 Sum_probs=80.1
Q ss_pred ccceeEEeeccc-ceeeeeeeecCCC-CcceEEEeecCCCCEEEEEc----C------------CcEEEEeCCCCceeee
Q 014644 113 NMATKIANVGNS-VHARCQKVYPHAH-DFNINSISNNSDCETFVSAD----D------------LRINLWNLEISDQCFN 174 (421)
Q Consensus 113 ~~~~~~~~~~~~-~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~----d------------~~i~lwd~~~~~~~~~ 174 (421)
...+.+++.+.. .....+..+ .+. -...+++.+.++|.+.++.. | ..=.+|.+.. ++ .+
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~-~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~~-~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTI-RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-ND-VR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE-CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-TC-CE
T ss_pred CCeEEEEEEECCCCEEEEEecc-ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-Ce-EE
Confidence 446777776653 223445555 332 34678999999999888752 1 1223444332 22 11
Q ss_pred eeecCCCCCCccCCCeeEEEEecCCCCeEEEEE-cCCeEEEEECCcc-cccccchhhhccccccCCCcccccccccceeE
Q 014644 175 IVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSS-SRGFVRLVDMRQS-ALCDHSARILRDAAESHGSKSFFTEIIASISD 252 (421)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d~~v~iwd~~~~-~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~ 252 (421)
.+ ...-.....++|+||+ +.|+.+. ..+.|..|++... .... .+.+.. ......
T Consensus 215 ~~-------~~~l~~pNGia~spDg-~~lYvadt~~~~I~~~~~~~~g~l~~--~~~~~~--------------~g~PDG 270 (355)
T 3sre_A 215 VV-------AEGFDFANGINISPDG-KYVYIAELLAHKIHVYEKHANWTLTP--LRVLSF--------------DTLVDN 270 (355)
T ss_dssp EE-------EEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEE--EEEEEC--------------SSEEEE
T ss_pred Ee-------ecCCcccCcceECCCC-CEEEEEeCCCCeEEEEEECCCCcEec--CEEEeC--------------CCCCce
Confidence 11 1122456899999999 6666554 6789999998642 2111 112211 356788
Q ss_pred EEEcC-CCCEEEEec-C-CeEEEEECC
Q 014644 253 IKFAN-DGQHLLSRD-Y-MNLKLWDIR 276 (421)
Q Consensus 253 ~~~s~-~~~~l~~~~-~-~~i~i~d~~ 276 (421)
+++.+ +|.+.+++. . +.|..|+..
T Consensus 271 i~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 271 ISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCCCcEEEEecCCceEEEEECCC
Confidence 99999 598877653 3 455555543
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.81 E-value=1.4 Score=42.30 Aligned_cols=156 Identities=5% Similarity=-0.105 Sum_probs=96.0
Q ss_pred cceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEE
Q 014644 139 FNINSISNNSDCETFVSA--DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVD 216 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd 216 (421)
..+..++|.+.+..|..+ .++.|+.++++ +.....++ .........+++.+.+.++.++-...+.|.+.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~-g~~~~~v~-------~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~ 108 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMN-GSALEHVV-------EFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSK 108 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE-------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECC-CCCcEEEE-------eCCCCCcceEEEEeCCCEEEEEECCCCEEEEEe
Confidence 457899999876666554 78899999987 33222222 112245678999987624445445668899999
Q ss_pred CCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec--C-CeEEEEECCCCCcceeEEeeccCccc
Q 014644 217 MRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD--Y-MNLKLWDIRMDSTPVATFKIHEHLRP 293 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~-~~i~i~d~~~~~~~~~~~~~~~~~~~ 293 (421)
+...... .+... .-.....+++.|...+|.... . +.|...++. +.....+...-..
T Consensus 109 ~dG~~~~----~l~~~-------------~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l~~~~~~-- 167 (628)
T 4a0p_A 109 LDGQHRQ----VLVWK-------------DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTLVPNVGR-- 167 (628)
T ss_dssp TTSTTCE----EEECS-------------SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEECSCSS--
T ss_pred cCCCcEE----EEEeC-------------CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEEECCCCC--
Confidence 8653211 11111 123568999999655555443 2 677777775 4333333211111
Q ss_pred ccccccCCCcceeeeEEEEcCCCCEEEEee-CCCeEEEEecCCC
Q 014644 294 KLCDLYNNDSIFDKFECSVSGDGLHFATGS-YSNLLRIFSHGVG 336 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-~dg~i~iwd~~~~ 336 (421)
...++++++++.|+.+. ..+.|...|+...
T Consensus 168 -------------P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 168 -------------ANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp -------------EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred -------------cceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 16899999877776654 5678999998754
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.72 E-value=0.65 Score=37.63 Aligned_cols=113 Identities=9% Similarity=-0.156 Sum_probs=62.0
Q ss_pred CCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC
Q 014644 188 EVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY 267 (421)
Q Consensus 188 ~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (421)
..+..++|+|++ .+.+ . .+|.+.-.+..+... ..+.. .... +=..--..-.++.|.|+|.+.++ ++
T Consensus 41 ~~~~~laf~P~G-~LYa-V-~~G~Ly~~~~~t~~~-----~~W~~-s~t~----IG~~Gw~~F~a~~fD~~G~LYav-~d 106 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYG-V-LNDKIYKGTPPTHDN-----DNWMG-RAKK----IGNGGWNQFQFLFFDPNGYLYAV-SK 106 (236)
T ss_dssp TTCSEEEECTTS-CEEE-E-ETTEEEEESCCCSTT-----CCHHH-HCEE----EECSCGGGCSEEEECTTSCEEEE-ET
T ss_pred ccceeEEECCCc-cEEE-E-eCCeEEEECCCCCCc-----ccccc-cccE----ecccccccceEEEECCCCCEEEe-CC
Confidence 367799999988 5444 4 788777666544221 11211 0000 00000011378999999998888 66
Q ss_pred CeEEEEECCCCCcce----eEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEE
Q 014644 268 MNLKLWDIRMDSTPV----ATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLR 329 (421)
Q Consensus 268 ~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~ 329 (421)
|.|+-++-.+.+... ...-+..... ++..+.+.|+|.+-+.. |+.++
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~-------------~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWS-------------GFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGG-------------GEEEEEECTTSCEEEEE--TTEEE
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCC-------------ceEEEEECCCceEEEEe--CCcEE
Confidence 888777753211110 0111111111 23688999999866555 78765
No 312
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.70 E-value=0.6 Score=40.22 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=74.0
Q ss_pred cCCCCEEEEE---cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC--------------
Q 014644 147 NSDCETFVSA---DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-------------- 209 (421)
Q Consensus 147 ~~~~~~l~s~---~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-------------- 209 (421)
+.++..|..+ +++.|...+.+ +....++. . -.+--+++++ ..|+.+...
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~--------~----~~~~~i~~~g-~~Iyy~~~~~~~~~~~~~~~~n~ 87 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLS--------N----DTAMYINADK-NYVYYVRNNNQKITSQTFFSYDR 87 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEE--------E----EEEEEEEECS-SEEEEEEECC------CCSSCCS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEcc--------C----CceeeEEEcC-CEEEEEECCCCcccccceeccCC
Confidence 3466666664 35666666665 33333321 1 1234568898 777776643
Q ss_pred CeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec---C--CeEEEEECCCCCcceeE
Q 014644 210 GFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD---Y--MNLKLWDIRMDSTPVAT 284 (421)
Q Consensus 210 ~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~--~~i~i~d~~~~~~~~~~ 284 (421)
..|+..++...... . +.. . .+..|++++++|+-.. . ..|+..++. +.....
T Consensus 88 ~~Iy~i~~dg~~~~----~-l~~---------------~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~~~~ 143 (302)
T 3s25_A 88 NSLCRIKRNGHGST----V-LDP---------------D--PCIYASLIGNYIYYLHYDTQTATSLYRIRID--GEEKKK 143 (302)
T ss_dssp EEEEEEETTSCCCE----E-EEC---------------S--CEEEEEEETTEEEEEEESSSSCEEEEEEETT--SCCCEE
T ss_pred CeEEEEeCCCCcce----E-eec---------------C--CccEEEEeCCEEEEEeecCCCCceEEEEECC--CCCeEE
Confidence 35666666654311 1 111 1 2336788888888654 3 445555554 444444
Q ss_pred EeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeC-CCeEEEEecCCC
Q 014644 285 FKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSY-SNLLRIFSHGVG 336 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~-dg~i~iwd~~~~ 336 (421)
+..+.. .+++|+++.|+-.+. ...|+.-++..+
T Consensus 144 lt~~~~-------------------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 144 IKNHYL-------------------FTCNTSDRYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EESSCC-------------------CCSEEETTEEEEECTTTCCEEEEETTTT
T ss_pred EeCCCc-------------------eEeeEECCEEEEEeCCCceEEEEECCCC
Confidence 443321 235678888886665 567888887655
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.62 E-value=0.71 Score=37.40 Aligned_cols=111 Identities=13% Similarity=-0.032 Sum_probs=62.6
Q ss_pred ceEEEeecCCCCEEEEEcCCcEEEEeCCCCce-----eeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEE
Q 014644 140 NINSISNNSDCETFVSADDLRINLWNLEISDQ-----CFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRL 214 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~i 214 (421)
.+..++|+|+|.+.+. .+|.+.-.+..+... .-+.+. . .+-. .-.++.|.|+| .+.++ .||.|.-
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG----~-~Gw~-~F~a~~fD~~G-~LYav--~dG~iyr 111 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIG----N-GGWN-QFQFLFFDPNG-YLYAV--SKDKLYK 111 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEE----C-SCGG-GCSEEEECTTS-CEEEE--ETTEEEE
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEec----c-cccc-cceEEEECCCC-CEEEe--CCCEEEE
Confidence 6779999999997777 777665555432110 001100 0 0111 13788999998 65555 6798887
Q ss_pred EECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEE
Q 014644 215 VDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLK 271 (421)
Q Consensus 215 wd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~ 271 (421)
++..+... ..+-. . .. .+-..--..+..|.+.|+|.+.+.. ++.++
T Consensus 112 ~~pP~~~~-----~~Wl~-~-a~---~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 112 ASPPQSDT-----DNWIA-R-AT---EVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp ESCCCSTT-----CCHHH-H-SE---EEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred eCCCcCCC-----Cceec-c-cc---EeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 77543221 11111 0 00 0000011467999999999988888 76644
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.45 E-value=1.4 Score=39.74 Aligned_cols=239 Identities=8% Similarity=0.062 Sum_probs=132.1
Q ss_pred cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecc
Q 014644 44 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 123 (421)
Q Consensus 44 ~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 123 (421)
+|..+.+|.=+ ..++.|+|+++.+ ++.....+++|.-..|..++.-- + .+...+.-|+++.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~--klks~~~~e~VvfWkWis~~~l~-----------l-----VT~taVyHWsi~~ 134 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKS--KMKAHTMTDDVTFWKWISLNTVA-----------L-----VTDNAVYHWSMEG 134 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTE--EEEEEECSSCCCEEEEEETTEEE-----------E-----ECSSEEEEEESSS
T ss_pred CCCCcEEEEec-CCeEEEEchHHhh--hhcceecCCCceEEEecCCCeEE-----------E-----EcCCeeEEecccC
Confidence 56777777665 6799999999876 33333344544433333221110 1 1233567788865
Q ss_pred cceeeeeeeecCCCC----cceEEEeecCCCCEEEE-E---c----CCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 124 SVHARCQKVYPHAHD----FNINSISNNSDCETFVS-A---D----DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 124 ~~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~s-~---~----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
...+++.+ ..|. ..|..-..+++.++++. | . .|.+.+|.++. +.-+.+ ++|.+.-.
T Consensus 135 --~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~i-------eGhaa~F~ 202 (494)
T 1bpo_A 135 --ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPI-------EGHAASFA 202 (494)
T ss_dssp --SCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEE-------CCSEEEEE
T ss_pred --CCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchh-------eeeeeeeE
Confidence 23677777 4543 35677778899998875 3 2 46789999882 222322 66654433
Q ss_pred EEEEec--CCCCeEEEEEcC---CeEEEEECCccccccc-c-hhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 192 SAEFHP--IYCNLLAYSSSR---GFVRLVDMRQSALCDH-S-ARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 192 ~~~~~p--~~~~~l~s~~~d---~~v~iwd~~~~~~~~~-~-~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
.+...- ...++++.+... +.++|.++........ . .+..+. ..++ ....+-.-++..++.-..+..
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv-~fpp------e~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV-FFPP------EAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEEC-CCCT------TSTTCCEEEEEEETTTTEEEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeee-eCCc------ccccCceeEEEecccCCEEEE
Confidence 333221 111344445443 7889998854310000 0 011111 0011 111334557778876666665
Q ss_pred ecC-CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 265 RDY-MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 265 ~~~-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
-+. |.|++||+.+ +.++..-+.....+ +-.+-.....-++.....|.|.--.++..
T Consensus 276 iTK~G~i~lyDleT-gt~i~~nrIs~~~i---------------F~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 276 ITKYGYIHLYDLET-GTCIYMNRISGETI---------------FVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EETTSEEEEEETTT-CCEEEEEECCSSCE---------------EEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EecCceEEEEeccc-ceeeeeecccCCce---------------EEecccCCCCcEEEEccCceEEEEEEccc
Confidence 555 9999999998 88776665544432 23333344344555557787776666654
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.28 E-value=1.4 Score=38.79 Aligned_cols=26 Identities=23% Similarity=0.495 Sum_probs=18.7
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEee
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWK 63 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd 63 (421)
.-..++| .+++++++ +..++.|++++
T Consensus 32 ~P~~ia~--~pdG~l~V-~e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAF--LPDGGMLI-AERPGRIRLFR 57 (352)
T ss_dssp CEEEEEE--CTTSCEEE-EETTTEEEEEE
T ss_pred CceEEEE--cCCCeEEE-EeCCCeEEEEE
Confidence 3468888 68887554 45668888888
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.75 E-value=1.9 Score=37.36 Aligned_cols=147 Identities=10% Similarity=0.112 Sum_probs=95.8
Q ss_pred CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCC
Q 014644 159 LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHG 238 (421)
Q Consensus 159 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~ 238 (421)
..|.+-|+....+..+ ..-...+.-.+|.. +.||.-. ..++.++|+.+.+.. +.+..
T Consensus 49 ~~VvIiDl~n~~~~~R-----------rpi~AdsAIMnP~~-~ViALra-g~~LQiFnletK~kl----ks~~~------ 105 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIR-----------RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKM----KAHTM------ 105 (365)
T ss_dssp EEEEEEETTSTTSCEE-----------EECCCSEEEECSSS-SEEEEEE-TTEEEEEETTTTEEE----EEEEC------
T ss_pred CEEEEEECCCCCCccc-----------cccccceeeeCCCc-cEEEEec-CCeEEEechHHhhhh----cceec------
Confidence 3677778774333221 11122355579987 7777665 789999999986543 33222
Q ss_pred CcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCE
Q 014644 239 SKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLH 318 (421)
Q Consensus 239 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 318 (421)
...|.-=.|-.+ +.|+--++..|+-|++.....+++.+..|.... +.. +..-..+++.+|
T Consensus 106 --------~e~VvfWkWis~-~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~--------~~Q---IInY~~d~~~kW 165 (365)
T 2xzh_A 106 --------TDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA--------GCQ---IINYRTDAKQKW 165 (365)
T ss_dssp --------SSCEEEEEECSS-SEEEEEESSEEEEEESSTTCCCEEEEECCGGGT--------TCE---EEEEEECTTSCE
T ss_pred --------CCccEEEEecCC-CeEEEEcCCcEEEEcccCCCCCceeeecchhcc--------cce---EEEEEECCCCCE
Confidence 345666667644 455555557899999986678999998887653 111 256778889998
Q ss_pred EEEee-------CCCeEEEEecCCCCCceeEEecCCCCc
Q 014644 319 FATGS-------YSNLLRIFSHGVGSAGGITVEAGKNEN 350 (421)
Q Consensus 319 l~~~s-------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 350 (421)
++..+ -.|.+.+|..+. ...+.++||...-
T Consensus 166 ~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F 202 (365)
T 2xzh_A 166 LLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASF 202 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEE
T ss_pred EEEEeEeccCCccceeEEEEeecc--cccceeeeeeeee
Confidence 76433 247889999884 5778888885543
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.72 E-value=2.1 Score=37.80 Aligned_cols=30 Identities=10% Similarity=0.091 Sum_probs=20.5
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCce
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK 68 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~ 68 (421)
.-..++| .++++ |+.+..++.|++++ .+++
T Consensus 30 ~P~~ia~--~pdG~-l~V~e~~g~I~~~d-~~G~ 59 (354)
T 3a9g_A 30 VPWSIAP--LGGGR-YLVTERPGRLVLIS-PSGK 59 (354)
T ss_dssp CEEEEEE--EETTE-EEEEETTTEEEEEC-SSCE
T ss_pred CCeEEEE--cCCCe-EEEEeCCCEEEEEe-CCCc
Confidence 4578889 56776 45556669999987 3444
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.87 E-value=3.2 Score=36.58 Aligned_cols=28 Identities=7% Similarity=0.357 Sum_probs=20.3
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeec
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKV 64 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~ 64 (421)
.-..|+| .++++.|+.+...|.|++++.
T Consensus 19 ~P~~i~~--~pdG~~l~V~e~~G~i~~~~~ 46 (353)
T 2g8s_A 19 HPWALAF--LPDNHGMLITLRGGELRHWQA 46 (353)
T ss_dssp SEEEEEE--CSTTCCEEEEETTTEEEEEET
T ss_pred CcEEEEE--cCCCCEEEEEeCCceEEEEeC
Confidence 3478888 688883445566788888874
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.81 E-value=4.9 Score=38.54 Aligned_cols=104 Identities=9% Similarity=-0.037 Sum_probs=54.6
Q ss_pred eEEEEcCCCCEEE-EeeCCCeEEEEecCCCCCceeEEecCCCCccceeeecCCcccccccceeeeecccCc-ccC---CC
Q 014644 308 FECSVSGDGLHFA-TGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPILQAAPRARRSSLSNLTRGLYRQA-HEN---SS 382 (421)
Q Consensus 308 ~~~~~sp~~~~l~-~~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d~~-~iw---~~ 382 (421)
..+++.+.+..|+ +-+..+.|.+.++... .....+...-...+.+++.|.+ ..|........ +|+ ..
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~~iavdp~~-------G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKILISEDLEEPRAIVLDPMV-------GYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECTTCCSEEEEEEETTT-------TEEEEEECSSSCEEEEEETT
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEEEEECCCCCeeeEEEEcCC-------CcEEEecCCCCCEEEEEccC
Confidence 5788987555444 4456788999998754 3323333334455677777651 13333221112 343 22
Q ss_pred CCcccccc-ccccCeEEEEEccCCCeEEEecC--CceEEE
Q 014644 383 SGHHELSY-NLSSKLLHLAWHPTTNLIACANG--NSLFFH 419 (421)
Q Consensus 383 ~~~~~~~~-~~~~~v~~~~~spd~~~la~~~~--~~~~i~ 419 (421)
+....... ..-.....+++.+++..|..+.. +.|..+
T Consensus 467 G~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 467 GSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 22111111 12345678899988777776653 335443
No 320
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.28 E-value=4.9 Score=36.90 Aligned_cols=60 Identities=13% Similarity=0.034 Sum_probs=35.5
Q ss_pred cceEEEeecCCCC--EEEEEcCCcEEEEeCCCCceeeeeeecCCCCCC----ccCCCeeEEEEecC
Q 014644 139 FNINSISNNSDCE--TFVSADDLRINLWNLEISDQCFNIVDMKPSNMD----DLTEVITSAEFHPI 198 (421)
Q Consensus 139 ~~v~~l~~~~~~~--~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~ 198 (421)
.....|+|.|+|. +|++-..|.|++++.........+.++...... .....+..|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3467899999996 666558899999975411111111221111111 12456889999996
No 321
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.27 E-value=3.8 Score=43.01 Aligned_cols=205 Identities=9% Similarity=0.101 Sum_probs=106.9
Q ss_pred cCCCCeEEEEeCCCcEEEeecCCceeEEeeecCCCCCcccccccccccceeeccCCCCceeeeecccccccceeEEeecc
Q 014644 44 APNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEWTENMATKIANVGN 123 (421)
Q Consensus 44 ~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 123 (421)
+|..+.+|.=+ ..++.|+|+++.+ ++.....+++|.-..|..+..- -+ .+...+.-|+++.
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~--klks~~~~e~VvfWkWis~~~l-----------~l-----VT~~aVyHW~~~~ 134 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKS--KMKAHTMTDDVTFWKWISLNTV-----------AL-----VTDNAVYHWSMEG 134 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhh--hhcccccCCCceEEEecCCCee-----------EE-----EcCCeEEEeccCC
Confidence 45556565554 6788999988765 3333334444443333322111 11 1233467788864
Q ss_pred cceeeeeeeecCCC----CcceEEEeecCCCCEEEE-E-------cCCcEEEEeCCCCceeeeeeecCCCCCCccCCCee
Q 014644 124 SVHARCQKVYPHAH----DFNINSISNNSDCETFVS-A-------DDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVIT 191 (421)
Q Consensus 124 ~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s-~-------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~ 191 (421)
...+++.+ ..| ...|..-..+++.++++. | -.|.+.+|.++.. .-+ .+.||.+.-.
T Consensus 135 --~s~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ-------~iegha~~F~ 202 (1630)
T 1xi4_A 135 --ESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQ-------PIEGHAASFA 202 (1630)
T ss_pred --CCccHHHH-hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc--cch-------hhhHhHhhhh
Confidence 23666666 555 345677777889998774 3 2478889988722 221 2256654433
Q ss_pred EEEEe--cCCCCeEEEEEc---CCeEEEEECCccccccc-c-hhhhccccccCCCcccccccccceeEEEEcCCCCEEEE
Q 014644 192 SAEFH--PIYCNLLAYSSS---RGFVRLVDMRQSALCDH-S-ARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLS 264 (421)
Q Consensus 192 ~~~~~--p~~~~~l~s~~~---d~~v~iwd~~~~~~~~~-~-~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (421)
.+... +....+++.+.. .+.++|.++........ . .+..+. ..++ ....+-..++..++.-..+..
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~-~~~~------~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV-FFPP------EAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccc-cCCc------ccccCcceEEEeccccCEEEE
Confidence 33332 111133333332 26888888854300000 0 011111 0000 011233456777776556655
Q ss_pred ecC-CeEEEEECCCCCcceeEEee
Q 014644 265 RDY-MNLKLWDIRMDSTPVATFKI 287 (421)
Q Consensus 265 ~~~-~~i~i~d~~~~~~~~~~~~~ 287 (421)
-+. |.|++||+.+ +.++..-+.
T Consensus 276 itk~G~~~~~d~~t-~~~i~~~ri 298 (1630)
T 1xi4_A 276 ITKYGYIHLYDLET-GTCIYMNRI 298 (1630)
T ss_pred EecCceEEEEeccc-chhhhhccc
Confidence 555 9999999997 776654443
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.97 E-value=1 Score=38.74 Aligned_cols=137 Identities=7% Similarity=-0.027 Sum_probs=73.3
Q ss_pred eecCCCCEEEEEc---CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEc-CCeEEEEECCcc
Q 014644 145 SNNSDCETFVSAD---DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSS-RGFVRLVDMRQS 220 (421)
Q Consensus 145 ~~~~~~~~l~s~~---d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-d~~v~iwd~~~~ 220 (421)
.|+++++.|+-.. ++.-.||.+...+...+.+ ..+. + ..++|++ +.|+..+. ...|...++..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~l-------t~~~--~--~~~~~~g-~~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKI-------KNHY--L--FTCNTSD-RYFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEE-------ESSC--C--CCSEEET-TEEEEECTTTCCEEEEETTTT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEE-------eCCC--c--eEeeEEC-CEEEEEeCCCceEEEEECCCC
Confidence 5677888888653 4444455443333323322 1121 1 3567888 66766554 567777777654
Q ss_pred cccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC---CeEEEEECCCCCcceeEEeeccCccccccc
Q 014644 221 ALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY---MNLKLWDIRMDSTPVATFKIHEHLRPKLCD 297 (421)
Q Consensus 221 ~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
... .++.. ... ..+.|++.+|+-... ..|..-++. +.....+.. ..
T Consensus 178 ~~~----~l~~~----------------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld--G~~~~~Lt~-~~------- 226 (302)
T 3s25_A 178 SEA----LFYDC----------------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN--NPNPVVLTE-AN------- 226 (302)
T ss_dssp EEE----EEECS----------------CEE-EEEEEETTEEEEEEGGGTTEEEEECSS--SCCCEECSC-SC-------
T ss_pred CEE----EEeCC----------------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECC--CCCeEEEeC-CC-------
Confidence 321 22221 112 235699988876532 345555554 443443421 11
Q ss_pred ccCCCcceeeeEEEEcCCCCEEEEeeC--CCeEEEEecCC
Q 014644 298 LYNNDSIFDKFECSVSGDGLHFATGSY--SNLLRIFSHGV 335 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~sp~~~~l~~~s~--dg~i~iwd~~~ 335 (421)
...|+|++++|+-++. .+.|..-++..
T Consensus 227 -----------~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 227 -----------IEHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp -----------EEEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred -----------cceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2347888888876543 35666666653
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.21 E-value=6.5 Score=35.58 Aligned_cols=148 Identities=9% Similarity=0.112 Sum_probs=95.8
Q ss_pred CCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccC
Q 014644 158 DLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESH 237 (421)
Q Consensus 158 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~ 237 (421)
...|.|-|+....+..+ ..-...+.-.+|.. +.|+.-. ..++.++|+.+.... +.+..
T Consensus 47 ~~~vvIiDl~~~~~~~r-----------rpi~AdsAIMnP~~-~iiALra-g~~lQiFnle~K~kl----ks~~~----- 104 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIR-----------RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKM----KAHTM----- 104 (494)
T ss_dssp CCEEEEEETTSTTSCEE-----------EECCCSEEEECSSS-SCEEEEE-TTEEEEEETTTTEEE----EEEEC-----
T ss_pred CCeEEEEECCCCCccee-----------cccccceeeeCCCC-cEEEEec-CCeEEEEchHHhhhh----cceec-----
Confidence 34677777773333221 11123456689987 7776654 789999999986543 22222
Q ss_pred CCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCC
Q 014644 238 GSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGL 317 (421)
Q Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 317 (421)
...|.-=.|-. .+.|+--++..|+-|++.....+++.+..|.... +.. +..-..+++.+
T Consensus 105 ---------~e~VvfWkWis-~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~--------~~Q---IInY~~d~~~k 163 (494)
T 1bpo_A 105 ---------TDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA--------GCQ---IINYRTDAKQK 163 (494)
T ss_dssp ---------SSCCCEEEEEE-TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGT--------TCE---EEEEEECTTSS
T ss_pred ---------CCCceEEEecC-CCeEEEEcCCeeEEecccCCCCchhheecchhcc--------cce---EEEEEECCCCC
Confidence 23455555654 3455555557899999976578899998887652 111 25677888999
Q ss_pred EEEEee-------CCCeEEEEecCCCCCceeEEecCCCCc
Q 014644 318 HFATGS-------YSNLLRIFSHGVGSAGGITVEAGKNEN 350 (421)
Q Consensus 318 ~l~~~s-------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 350 (421)
|++..+ -.|.+.+|..+. ...+.++||...-
T Consensus 164 W~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F 201 (494)
T 1bpo_A 164 WLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASF 201 (494)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESTT--CCEEEECCSEEEE
T ss_pred eEEEEeecccCCcccceEEEeeccc--cccchheeeeeee
Confidence 876433 247889999884 5778888886544
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.28 E-value=11 Score=39.62 Aligned_cols=127 Identities=11% Similarity=0.138 Sum_probs=81.5
Q ss_pred EEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEE
Q 014644 192 SAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLK 271 (421)
Q Consensus 192 ~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~ 271 (421)
+.-.+|.. +.|+.-. ..++.|+|+.+.... +.+.. ...|.-=.|-.+ +.|+--++..|+
T Consensus 70 sAIMnP~~-~iiALra-g~~lQiFnl~~k~kl----ks~~~--------------~e~VvfWkWis~-~~l~lVT~~aVy 128 (1630)
T 1xi4_A 70 SAIMNPAS-KVIALKA-GKTLQIFNIEMKSKM----KAHTM--------------TDDVTFWKWISL-NTVALVTDNAVY 128 (1630)
T ss_pred hhccCCCc-ceEEEec-CCeEEEeehHHhhhh----ccccc--------------CCCceEEEecCC-CeeEEEcCCeEE
Confidence 45578887 6666554 789999999886533 32222 234555566543 455544556899
Q ss_pred EEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCCCCEEEEee-------CCCeEEEEecCCCCCceeEEe
Q 014644 272 LWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGDGLHFATGS-------YSNLLRIFSHGVGSAGGITVE 344 (421)
Q Consensus 272 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~~s-------~dg~i~iwd~~~~~~~~~~~~ 344 (421)
-|++.....|++.+..|.... +.. |.+-..+++.+|++..+ -.|.+.+|.++. ...+.+.
T Consensus 129 HW~~~~~s~P~k~fdR~~~L~--------~~Q---IinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~ie 195 (1630)
T 1xi4_A 129 HWSMEGESQPVKMFDRHSSLA--------GCQ---IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIE 195 (1630)
T ss_pred EeccCCCCccHHHHhcchhcc--------cCe---eEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhh
Confidence 999975567777777665542 111 24667788888876433 358899999884 4567777
Q ss_pred cCCCCccc
Q 014644 345 AGKNENRK 352 (421)
Q Consensus 345 ~~~~~~~~ 352 (421)
||...-..
T Consensus 196 gha~~F~~ 203 (1630)
T 1xi4_A 196 GHAASFAQ 203 (1630)
T ss_pred HhHhhhhe
Confidence 77654433
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=88.64 E-value=10 Score=32.06 Aligned_cols=22 Identities=14% Similarity=0.341 Sum_probs=15.5
Q ss_pred CCCEEEEeeCC-----CeEEEEecCCC
Q 014644 315 DGLHFATGSYS-----NLLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~d-----g~i~iwd~~~~ 336 (421)
+++.++.|+.+ ..+.+||..+.
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 67777777765 35788888765
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.13 E-value=7.5 Score=33.91 Aligned_cols=23 Identities=13% Similarity=0.161 Sum_probs=20.4
Q ss_pred CeEEEEEcCCeEEEEECCccccc
Q 014644 201 NLLAYSSSRGFVRLVDMRQSALC 223 (421)
Q Consensus 201 ~~l~s~~~d~~v~iwd~~~~~~~ 223 (421)
..+++++.+|.+...|+++|+..
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEE
T ss_pred CEEEEEecCCEEEEEECCCCcEE
Confidence 57889999999999999999754
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.86 E-value=32 Score=35.78 Aligned_cols=246 Identities=11% Similarity=0.028 Sum_probs=115.2
Q ss_pred EEEEEEEcCCCCeEEEEeCCCcEEEeecCCce------eEEeeecCCCCCcccccccccccceeeccCCCCceeeeeccc
Q 014644 37 NRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK------VKKIKEMDHFPFVSSENTLLAEKNFMNEHNPPSFAHGYHLEW 110 (421)
Q Consensus 37 ~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 110 (421)
.++.+ -+..+|+.||..|.=.+|.+.... +..+....--+||.++....... ..........+.
T Consensus 330 ssl~~---l~~g~lFvgS~~Gds~l~~~~~~~~~~~~~~~~~~~~~N~~PI~D~~v~d~~~-------~~~~~i~~~sG~ 399 (1158)
T 3ei3_A 330 ECLTY---LDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLER-------QGQGQLVTCSGA 399 (1158)
T ss_dssp SEEEE---CSTTEEEEECSSSCEEEEEECSSCCTTSCCEEEEEEECCCCSEEEEEEECTTS-------SSCCEEEEEECC
T ss_pred cEEEE---ECCCEEEEEEecCCcEEEEEecCCCCccceEEeEeeecCcCCceeEEEEccCC-------CCCCeEEEEECc
Confidence 34554 345689999998888888876432 23344444445555544322110 011122222222
Q ss_pred ccccceeEEeecccceeeeeeeecCCCCcceEEEeec---CCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCCCCCCcc
Q 014644 111 TENMATKIANVGNSVHARCQKVYPHAHDFNINSISNN---SDCETFVSA-DDLRINLWNLEISDQCFNIVDMKPSNMDDL 186 (421)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 186 (421)
...+.+++..-.-.......-.+ . ....++.+... ....+|+.+ .+.+ .++.+. ++ .+..+.. ..+...
T Consensus 400 g~~gsL~~lr~Gi~~~~~~~~~l-~-gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~-~e-~veev~~--~gf~~~ 472 (1158)
T 3ei3_A 400 FKEGSLRIIRNGIGIHEHASIDL-P-GIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLN-GE-EVEETEL--MGFVDD 472 (1158)
T ss_dssp GGGCEEEEEEESBCEEEEEEECC-C-SCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEE-TT-EEEEECC--TTCCSS
T ss_pred CCCCeEEEEecCCCEEEEEeecC-C-CccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEe-CC-ccccccc--ccccCC
Confidence 23344444433322211111123 2 33566666643 235688888 6655 566664 22 2222110 111111
Q ss_pred CCCeeEEEEecCCCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEec
Q 014644 187 TEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRD 266 (421)
Q Consensus 187 ~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (421)
...+.+-.+ ++ ..++=.... .|++.+....... ..|.. + ....|...+.+ +..++.++
T Consensus 473 ~~TL~~~~l-~~--~~ivQVt~~-~Irli~~~~~~~~----~~w~~----p--------~~~~I~~As~n--~~~vvva~ 530 (1158)
T 3ei3_A 473 QQTFFCGNV-AH--QQLIQITSA-SVRLVSQEPKALV----SEWKE----P--------QAKNISVASCN--SSQVVVAV 530 (1158)
T ss_dssp SCEEEEEEE-TT--TEEEEEESS-CEEEEESSSCCEE----EEECC----T--------TCCCCCEEEEC--SSEEEEEE
T ss_pred CCcEEEEEc-CC--CeEEEEecC-EEEEEECCCCeEE----EEEEC----C--------CCCEEEEEEeC--CCEEEEEE
Confidence 111111111 22 233333333 3566665432211 22322 0 01245555554 34555554
Q ss_pred CCeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC------CCEEEEeeC-CCeEEEEecCCC
Q 014644 267 YMNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD------GLHFATGSY-SNLLRIFSHGVG 336 (421)
Q Consensus 267 ~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~------~~~l~~~s~-dg~i~iwd~~~~ 336 (421)
.+.+..+.+.. ++.. ......-. + ++.++++.|. +.+++.|.. |++|+|+++.+.
T Consensus 531 g~~l~~fel~~-~~L~-~~~~~~l~----------~---evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 531 GRALYYLQIHP-QELR-QISHTEME----------H---EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp TTEEEEEEEET-TEEE-EEEEEECS----------S---CEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEEeeC-Ccee-eecccCCC----------C---ceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 57788888764 4322 11111100 0 2367888763 478999996 999999999864
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.25 E-value=22 Score=33.34 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=48.8
Q ss_pred cceeEEEEcCCCCEEEEecC--CeEEEEECCCC-----Ccc-------eeEEeeccCcccccccccCCCcceeeeEEEEc
Q 014644 248 ASISDIKFANDGQHLLSRDY--MNLKLWDIRMD-----STP-------VATFKIHEHLRPKLCDLYNNDSIFDKFECSVS 313 (421)
Q Consensus 248 ~~v~~~~~s~~~~~l~~~~~--~~i~i~d~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 313 (421)
.....+.++|||++++.++. .++.++|+++- .+. +......- +....+|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl----------------GPlHt~Fd 386 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL----------------GPLHTTFD 386 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS----------------CEEEEEEC
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC----------------cccEEEEC
Confidence 34568999999999998754 89999998731 111 11111111 12688999
Q ss_pred CCCCEEEEeeCCCeEEEEecCC
Q 014644 314 GDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 314 p~~~~l~~~s~dg~i~iwd~~~ 335 (421)
++|....+---|..|.-|++..
T Consensus 387 ~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 387 GRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCceEeeeeecceEEEEeccH
Confidence 9994444555799999999875
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=83.51 E-value=22 Score=31.05 Aligned_cols=32 Identities=16% Similarity=0.232 Sum_probs=23.7
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCce
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQK 68 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~ 68 (421)
.-..|+| .|++.++++--..|.|++++..++.
T Consensus 33 ~P~~ia~--~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 33 SPWGLAP--LPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp SEEEEEE--CTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CceEEEE--cCCCcEEEEEecCCEEEEEECCCCc
Confidence 4568889 6888877766658999888765544
No 330
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.91 E-value=47 Score=33.69 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=28.9
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCccccc
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALC 223 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~ 223 (421)
.+.+++..++. .++++-+.|+++|+|++.++++.
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeE
Confidence 46677777777 89999999999999999998754
No 331
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=81.85 E-value=22 Score=29.92 Aligned_cols=22 Identities=14% Similarity=0.373 Sum_probs=15.6
Q ss_pred CCCEEEEeeCCC-----eEEEEecCCC
Q 014644 315 DGLHFATGSYSN-----LLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~dg-----~i~iwd~~~~ 336 (421)
++++++.|+.++ .+.+||..+.
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 677777777553 4888888765
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.25 E-value=2.7 Score=39.24 Aligned_cols=79 Identities=15% Similarity=0.094 Sum_probs=51.2
Q ss_pred ceEEEeecCCCCEEEEE--cCCcEEEEeCCCCceeee--eeecC---CCCCCccCCCeeEEEEecCCCCeEEEEEcCCeE
Q 014644 140 NINSISNNSDCETFVSA--DDLRINLWNLEISDQCFN--IVDMK---PSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFV 212 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~--~d~~i~lwd~~~~~~~~~--~~~~~---~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v 212 (421)
....+.++|||++++.+ -+.++.++|+++-...+. +++.+ ....+ -.-.....+|.++| +...+--.|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCC-ceEeeeeecceE
Confidence 45678889999999986 789999999873111100 00000 00111 12345778999998 666666689999
Q ss_pred EEEECCcc
Q 014644 213 RLVDMRQS 220 (421)
Q Consensus 213 ~iwd~~~~ 220 (421)
.-|++...
T Consensus 402 vkWni~~a 409 (638)
T 3sbq_A 402 VKWNMEEA 409 (638)
T ss_dssp EEEEHHHH
T ss_pred EEEeccHH
Confidence 99998753
No 333
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.58 E-value=35 Score=34.59 Aligned_cols=40 Identities=20% Similarity=0.354 Sum_probs=32.2
Q ss_pred cceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecC
Q 014644 139 FNINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMK 179 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~ 179 (421)
..+.+++..++..++++- .|+++|+|++. .++++...++.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~-t~~~v~t~dL~ 276 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETIELS 276 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETT-TTEEEEEEECC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECC-CCCeEeeeccc
Confidence 356777788888888885 99999999999 67788777654
No 334
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=79.04 E-value=28 Score=29.30 Aligned_cols=108 Identities=11% Similarity=0.043 Sum_probs=57.7
Q ss_pred ceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECCc
Q 014644 140 NINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQ 219 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~ 219 (421)
.|..++..... .++.. |+.|..|-....+++-.. ......|..++.... ..++. . ||.|..|-...
T Consensus 25 ~i~~ia~G~~h-~~~l~-~G~v~~wG~n~~Gqlg~p--------~~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLALK-GGKVLGWGANLNGQLTMP--------AATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp SCCEEEECSSE-EEEEE-TTEEEEEECCSSSTTSCC--------GGGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCT
T ss_pred CCcEEEeCCCe-EEEEE-CCEEEEEeCCCCCCCCCC--------ccCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCC
Confidence 45566554332 23333 888888877644443210 112235677766544 33443 4 99999997654
Q ss_pred ccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCc
Q 014644 220 SALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDST 280 (421)
Q Consensus 220 ~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~ 280 (421)
......+... ...|..++...+...+++ +|.|+.|-....++
T Consensus 91 ~Gqlg~P~~~-----------------~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gq 132 (282)
T 3qhy_B 91 DGQTTVPAEA-----------------RSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQ 132 (282)
T ss_dssp TSTTCCCGGG-----------------SSSEEEEEEETTEEEEEE--TTEEEEEECCTTST
T ss_pred CCCCCCCccc-----------------CCCeEEEECcCCEEEEEe--CCeEEEecCCCCCc
Confidence 3222110000 235777776654444444 78899998765343
No 335
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.82 E-value=30 Score=31.65 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=22.2
Q ss_pred cceeEEEEcCCCC--EEEEecCCeEEEEECC
Q 014644 248 ASISDIKFANDGQ--HLLSRDYMNLKLWDIR 276 (421)
Q Consensus 248 ~~v~~~~~s~~~~--~l~~~~~~~i~i~d~~ 276 (421)
.....|+|.|||. ++++-..|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3567999999985 6666555999999753
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=66.72 E-value=57 Score=27.38 Aligned_cols=22 Identities=0% Similarity=0.196 Sum_probs=16.0
Q ss_pred CCCEEEEeeCC-----CeEEEEecCCC
Q 014644 315 DGLHFATGSYS-----NLLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~d-----g~i~iwd~~~~ 336 (421)
++++++.|+.+ ..+.+||..+.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 67777777754 56888888765
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=63.13 E-value=74 Score=27.42 Aligned_cols=25 Identities=4% Similarity=-0.097 Sum_probs=15.6
Q ss_pred CCCCEEEEeeCCC------eEEEEecCCCCC
Q 014644 314 GDGLHFATGSYSN------LLRIFSHGVGSA 338 (421)
Q Consensus 314 p~~~~l~~~s~dg------~i~iwd~~~~~~ 338 (421)
.++++++.|+.++ .|.++++++++.
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 4677777787543 466668887633
No 338
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=60.52 E-value=52 Score=30.96 Aligned_cols=62 Identities=15% Similarity=-0.019 Sum_probs=39.2
Q ss_pred cceeEEEEcCCCCEEEEecC-------------CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcC
Q 014644 248 ASISDIKFANDGQHLLSRDY-------------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSG 314 (421)
Q Consensus 248 ~~v~~~~~s~~~~~l~~~~~-------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 314 (421)
.....|.|.++|.+.+..+. ..+..++..+ ++....+.+.... .++.++|+|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~t-Gel~~fl~~P~~a--------------EpnGiafSP 540 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGC--------------EVTGISFSP 540 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTT-CCEEEEEECCTTC--------------EEEEEEECT
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCC-CeEEEEEeCCCCc--------------cccCCEECC
Confidence 45678999999987774321 1455566543 5544444333221 227999999
Q ss_pred CCCEEEEeeC
Q 014644 315 DGLHFATGSY 324 (421)
Q Consensus 315 ~~~~l~~~s~ 324 (421)
|++.|++.-+
T Consensus 541 D~ktLfV~vQ 550 (592)
T 4a9v_A 541 DQKTLFVGIQ 550 (592)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999887653
No 339
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.14 E-value=49 Score=31.35 Aligned_cols=60 Identities=15% Similarity=-0.008 Sum_probs=38.9
Q ss_pred ceeEEEEcCCCCEEEEecC-------------CeEEEEECCCCCcceeEEeeccCcccccccccCCCcceeeeEEEEcCC
Q 014644 249 SISDIKFANDGQHLLSRDY-------------MNLKLWDIRMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVSGD 315 (421)
Q Consensus 249 ~v~~~~~s~~~~~l~~~~~-------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 315 (421)
..-.|+|+|.|.+++..+. ..+.+.+..+ ++....+.++... +++.++|+||
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-g~~~rf~~~P~ga--------------E~TG~~fspD 541 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPAT-GEIRRFMVGPIGC--------------EVTGISFSPD 541 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTT-CCEEEEEECCTTC--------------EEEEEEECTT
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCC-CeEEEEEeCCCCc--------------cCcCeeECCC
Confidence 4577999999987765421 1344555543 5555555554332 3479999999
Q ss_pred CCEEEEee
Q 014644 316 GLHFATGS 323 (421)
Q Consensus 316 ~~~l~~~s 323 (421)
++.|+..-
T Consensus 542 g~tlfvni 549 (592)
T 3zwu_A 542 QKTLFVGI 549 (592)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 99887763
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=59.63 E-value=78 Score=26.59 Aligned_cols=28 Identities=0% Similarity=0.011 Sum_probs=18.5
Q ss_pred CCCCeEEEEeCC----CcEEEeecCCceeEEe
Q 014644 45 PNGSMFILSTND----KTIKLWKVRDQKVKKI 72 (421)
Q Consensus 45 ~~~~~l~t~s~d----~~v~lwd~~~~~~~~~ 72 (421)
-++.+++.|+.+ ..+.++|..+.+-..+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~ 54 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL 54 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEEC
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeEC
Confidence 345677777642 3688899888774444
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=58.70 E-value=1.1e+02 Score=27.85 Aligned_cols=36 Identities=17% Similarity=0.354 Sum_probs=23.9
Q ss_pred cEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEe
Q 014644 35 KINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKI 72 (421)
Q Consensus 35 ~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~ 72 (421)
.-..++| .|+++++++-...+.|++++..++....+
T Consensus 28 ~P~~~a~--~pdG~l~V~e~~gg~I~~~~~~~g~~~~~ 63 (454)
T 1cru_A 28 KPHALLW--GPDNQIWLTERATGKILRVNPESGSVKTV 63 (454)
T ss_dssp SEEEEEE--CTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred CceEEEE--cCCCcEEEEEcCCCEEEEEECCCCcEeEE
Confidence 4468999 68888776654445788887655554333
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.47 E-value=74 Score=33.07 Aligned_cols=40 Identities=20% Similarity=0.378 Sum_probs=31.3
Q ss_pred ceEEEeecCCCCEEEEE-cCCcEEEEeCCCCceeeeeeecCC
Q 014644 140 NINSISNNSDCETFVSA-DDLRINLWNLEISDQCFNIVDMKP 180 (421)
Q Consensus 140 ~v~~l~~~~~~~~l~s~-~d~~i~lwd~~~~~~~~~~~~~~~ 180 (421)
.+.+++..++..++++- .|+++|+|++. .++++...++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~-t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS-TNQCVETIELSQ 279 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT-TTEEEEEEECCC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC-CCCeEEeechhh
Confidence 45566667788888886 99999999998 678888776643
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=56.42 E-value=35 Score=29.70 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=57.5
Q ss_pred CeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCcccccccccceeEEE---EcCCCCEEEEe--cCCeEEEEEC
Q 014644 201 NLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIK---FANDGQHLLSR--DYMNLKLWDI 275 (421)
Q Consensus 201 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~---~s~~~~~l~~~--~~~~i~i~d~ 275 (421)
.+++.++.||.|.-.|..+|+.. |... .. . ..++.... ...++..++.. .+|.|..++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~------W~~~-~~-~--------~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~ 74 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHII------WSIE-PE-N--------FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNA 74 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEE------EEEC-GG-G--------SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEET
T ss_pred CEEEEEeCCCeEEEEECCCCcEE------EEec-CC-c--------cCCcEEecCCccccCCcEEEEEECCCCEEEEEEC
Confidence 47888899999999998888743 2220 00 0 00010000 00133444442 3488988888
Q ss_pred CCCCcceeEEeeccCcccccccccCCCcceeeeEEEEc-----------CCCCEEEEeeCCCeEEEEecCCCC
Q 014644 276 RMDSTPVATFKIHEHLRPKLCDLYNNDSIFDKFECSVS-----------GDGLHFATGSYSNLLRIFSHGVGS 337 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-----------p~~~~l~~~s~dg~i~iwd~~~~~ 337 (421)
.+ +.....+....-.. . ..+... ..+..+++|+.+|.++-.|+.+|+
T Consensus 75 ~~-G~~~~~~~~~~lv~--~------------SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 75 HQ-GLQKLPLSIRQLVS--T------------SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TT-EEEEEEEEHHHHHT--T------------CSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred CC-CcEEeeecccccee--c------------cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 65 54333332221100 0 001110 135578899999999999999983
No 344
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=54.68 E-value=93 Score=25.90 Aligned_cols=22 Identities=23% Similarity=0.573 Sum_probs=15.8
Q ss_pred CCCEEEEeeCC-----CeEEEEecCCC
Q 014644 315 DGLHFATGSYS-----NLLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~d-----g~i~iwd~~~~ 336 (421)
+++.++.|+.+ ..+.+||+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 67777777654 45888998765
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=54.60 E-value=97 Score=26.12 Aligned_cols=24 Identities=4% Similarity=-0.038 Sum_probs=15.3
Q ss_pred cCCCCeEEEEEc------CCeEEEEECCccc
Q 014644 197 PIYCNLLAYSSS------RGFVRLVDMRQSA 221 (421)
Q Consensus 197 p~~~~~l~s~~~------d~~v~iwd~~~~~ 221 (421)
.++ .+++.|+. -..+.+||+.+.+
T Consensus 157 ~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 157 HNG-MIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp ETT-EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred ECC-EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 345 66666653 2358889988754
No 346
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.27 E-value=37 Score=35.31 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=27.8
Q ss_pred CeeEEEEecCCCCeEEEEEcCCeEEEEECCccccc
Q 014644 189 VITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALC 223 (421)
Q Consensus 189 ~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~~~~~~ 223 (421)
.+.+++..++. .++++-+.|+++|+|++.++++.
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCV 272 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeE
Confidence 44556667776 89999999999999999998754
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=51.57 E-value=1.8e+02 Score=28.32 Aligned_cols=120 Identities=10% Similarity=-0.049 Sum_probs=65.6
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCC-----ceee--eeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCe
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEIS-----DQCF--NIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGF 211 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~-----~~~~--~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~ 211 (421)
..|.++.-.+++.+.+....+-|.++|.... .... ..+... ..+ ....|.++...++| .+.+.++..+-
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-~~l--~~~~i~~i~~d~~g-~lWi~~~t~~G 494 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVH-NGL--SGMFINQIIPDNEG-NVWVLLYNNKG 494 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGG-GTC--SCSCEEEEEECTTS-CEEEEETTCSS
T ss_pred ceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccc-ccc--ccceeeeEEEcCCC-CEEEEccCCCC
Confidence 4577887777787766555555777875410 1111 111000 001 12358889888888 66553333444
Q ss_pred EEEEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCC
Q 014644 212 VRLVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRM 277 (421)
Q Consensus 212 v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~ 277 (421)
|..+|..+++.. . +.. . . +. ....+.++....+|.+-++.. +-+..||..+
T Consensus 495 l~~~d~~~~~~~----~-~~~-~-~------~~-~~~~~~~i~~d~~g~lWigt~-~Gl~~~~~~~ 545 (758)
T 3ott_A 495 IDKINPRTREVT----K-LFA-D-E------LT-GEKSPNYLLCDEDGLLWVGFH-GGVMRINPKD 545 (758)
T ss_dssp EEEEETTTTEEE----E-ECT-T-T------SC-GGGCEEEEEECTTSCEEEEET-TEEEEECC--
T ss_pred cEEEeCCCCceE----E-ecC-C-C------cC-CCcccceEEECCCCCEEEEec-CceEEEecCC
Confidence 778888765432 1 100 0 0 00 024577888888887776554 4588888764
No 348
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=50.69 E-value=1.3e+02 Score=26.52 Aligned_cols=156 Identities=8% Similarity=0.059 Sum_probs=83.6
Q ss_pred cEEEEeCCCCc--eeeeeeecCCCCCCccCCCeeEEEEe---cC---CCCeEEEEE-cCCeEEEEECCcccccccchhhh
Q 014644 160 RINLWNLEISD--QCFNIVDMKPSNMDDLTEVITSAEFH---PI---YCNLLAYSS-SRGFVRLVDMRQSALCDHSARIL 230 (421)
Q Consensus 160 ~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---p~---~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~ 230 (421)
+|.+||+. +. +.++.+.+....... ...+..+++. |. +..+++.+. ....|.++|+.+++.. +..
T Consensus 124 kLv~~DL~-t~~~~li~~y~~p~~~~~~-~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw----Rv~ 197 (381)
T 3q6k_A 124 AIVAYDLK-QPNYPEVVRYYFPTRLVEK-PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW----NVT 197 (381)
T ss_dssp EEEEEESS-STTCCEEEEEECCGGGCCC-GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE----EEE
T ss_pred eEEEEECC-CCCceeEEEEECCHHhccc-CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE----EEc
Confidence 46678887 44 666666554333332 3567888887 32 113444443 4678999999988654 222
Q ss_pred ccccccCCCcc--ccccc----ccceeEEEEcCC----CCEEEEecCCeEEEEECCC-----C--CcceeEEeeccCccc
Q 014644 231 RDAAESHGSKS--FFTEI----IASISDIKFAND----GQHLLSRDYMNLKLWDIRM-----D--STPVATFKIHEHLRP 293 (421)
Q Consensus 231 ~~h~~~~~~~~--~~~~~----~~~v~~~~~s~~----~~~l~~~~~~~i~i~d~~~-----~--~~~~~~~~~~~~~~~ 293 (421)
.. ...+.... ...+. ...+..|+++|+ ++.|.-..-..-++|.+.+ . ...++.+ +.....
T Consensus 198 ~~-~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~- 274 (381)
T 3q6k_A 198 HP-TFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKY- 274 (381)
T ss_dssp CG-GGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTT-
T ss_pred cC-CCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCC-
Confidence 11 11121100 11111 247889999998 7777765432334454421 1 1112222 111110
Q ss_pred ccccccCCCcceeeeEEEEc-CCCCEEEEeeCCCeEEEEecCC
Q 014644 294 KLCDLYNNDSIFDKFECSVS-GDGLHFATGSYSNLLRIFSHGV 335 (421)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~s-p~~~~l~~~s~dg~i~iwd~~~ 335 (421)
.+ -..+++. .+|.+.++--+.+.|..|+..+
T Consensus 275 -------s~----~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 275 -------ND----AIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -------CC----EEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred -------CC----cceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 00 0245675 5677777777888999999875
No 349
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=49.48 E-value=1.1e+02 Score=25.42 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=33.6
Q ss_pred CCCEEEEE-cC----CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC------CeEEEEEC
Q 014644 149 DCETFVSA-DD----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR------GFVRLVDM 217 (421)
Q Consensus 149 ~~~~l~s~-~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------~~v~iwd~ 217 (421)
++.+++.| .+ ..+.+||+.+ .. ...+.. +......-..+. -++ .+++.|+.+ ..+.+||+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~-~~-W~~~~~----~p~~r~~~~~~~--~~~-~iyv~GG~~~~~~~~~~~~~~d~ 125 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVK-DS-WYSKLG----PPTPRDSLAACA--AEG-KIYTSGGSEVGNSALYLFECYDT 125 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTT-TE-EEEEEC----CSSCCBSCEEEE--ETT-EEEEECCBBTTBSCCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCC-Ce-EEECCC----CCccccceeEEE--ECC-EEEEECCCCCCCcEeeeEEEEeC
Confidence 56666666 44 5688889873 32 222211 111111111222 245 677777755 45888898
Q ss_pred Cccc
Q 014644 218 RQSA 221 (421)
Q Consensus 218 ~~~~ 221 (421)
.+.+
T Consensus 126 ~~~~ 129 (306)
T 3ii7_A 126 RTES 129 (306)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8754
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=47.17 E-value=1.9e+02 Score=28.08 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=28.2
Q ss_pred ccEEEEEEEEcCCCCeEEEEeCCCcEEEeecCCceeEEeee
Q 014644 34 EKINRVRWCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKE 74 (421)
Q Consensus 34 ~~V~~v~~~~~~~~~~l~t~s~d~~v~lwd~~~~~~~~~~~ 74 (421)
..|.++.+ +..++++-+.|+++|+|++.++++.....
T Consensus 222 ~~Is~~~~----~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF----HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE----TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc----CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34666655 36799999999999999999998444333
No 351
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=38.44 E-value=1.7e+02 Score=24.35 Aligned_cols=64 Identities=9% Similarity=0.063 Sum_probs=34.1
Q ss_pred CCCEEEEE-cC-----CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcC-----CeEEEEEC
Q 014644 149 DCETFVSA-DD-----LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSR-----GFVRLVDM 217 (421)
Q Consensus 149 ~~~~l~s~-~d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----~~v~iwd~ 217 (421)
++++++.| .+ ..+.+||+.+ . ....+. .+......-..+.+ ++ .+++.|+.+ ..+.+||+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~-~W~~~~----~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPER-N-EWRMIT----AMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-T-EEEECC----CCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEET
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCC-C-eEeeCC----CCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeC
Confidence 56666665 43 4688899873 2 233221 11111111122222 45 677777654 46889998
Q ss_pred Cccc
Q 014644 218 RQSA 221 (421)
Q Consensus 218 ~~~~ 221 (421)
.+.+
T Consensus 239 ~~~~ 242 (308)
T 1zgk_A 239 ETET 242 (308)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8754
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=37.15 E-value=2.9e+02 Score=26.63 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=34.5
Q ss_pred CCCEEEEE-cC------CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCC--eEEEEECCc
Q 014644 149 DCETFVSA-DD------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRG--FVRLVDMRQ 219 (421)
Q Consensus 149 ~~~~l~s~-~d------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~--~v~iwd~~~ 219 (421)
+++.++.| .+ ..+.+||..+. .+..+. .+...... .+++...++ .+++.|+.++ .+.+||+.+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~--~W~~~~----~~p~~R~~-h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTR--EWSMIK----SLSHTRFR-HSACSLPDG-NVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTT--EEEECC----CCSBCCBS-CEEEECTTS-CEEEECCBCSSCSEEEEETTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCC--cEEECC----CCCCCccc-ceEEEEcCC-EEEEECCCCCCCCEEEEECCC
Confidence 56666665 32 34788888732 232221 11111111 122232366 7888887654 688999887
Q ss_pred cc
Q 014644 220 SA 221 (421)
Q Consensus 220 ~~ 221 (421)
..
T Consensus 523 ~~ 524 (695)
T 2zwa_A 523 EI 524 (695)
T ss_dssp TE
T ss_pred Cc
Confidence 54
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.08 E-value=2e+02 Score=27.16 Aligned_cols=60 Identities=8% Similarity=0.057 Sum_probs=37.0
Q ss_pred cceEEEeecCCCCEEEEEcC-------------CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEE
Q 014644 139 FNINSISNNSDCETFVSADD-------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAY 205 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d-------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s 205 (421)
.....|.|.++|.+.+..+. ..|..++.. .++....+. ......++.++|+||+ +.|+.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~-tGel~~fl~------~P~~aEpnGiafSPD~-ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMV------GPIGCEVTGISFSPDQ-KTLFV 547 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT-TCCEEEEEE------CCTTCEEEEEEECTTS-SEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC-CCeEEEEEe------CCCCccccCCEECCCC-CEEEE
Confidence 34678899999988884311 145555554 344444331 1123468999999999 66665
Q ss_pred E
Q 014644 206 S 206 (421)
Q Consensus 206 ~ 206 (421)
+
T Consensus 548 ~ 548 (592)
T 4a9v_A 548 G 548 (592)
T ss_dssp E
T ss_pred E
Confidence 4
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=31.56 E-value=1.8e+02 Score=27.50 Aligned_cols=58 Identities=10% Similarity=0.098 Sum_probs=35.6
Q ss_pred eEEEeecCCCCEEEEEc-C------------CcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEE
Q 014644 141 INSISNNSDCETFVSAD-D------------LRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYS 206 (421)
Q Consensus 141 v~~l~~~~~~~~l~s~~-d------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 206 (421)
.-.|+|+|.|.+++.-+ + ..+.+.+.. .++..+.+. ......++.++|+||+ +.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~-~g~~~rf~~------~P~gaE~TG~~fspDg-~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA-TGEIRRFMV------GPIGCEVTGISFSPDQ-KTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT-TCCEEEEEE------CCTTCEEEEEEECTTS-SEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC-CCeEEEEEe------CCCCccCcCeeECCCC-CEEEEE
Confidence 45688999998666532 1 124444444 345554442 1234678999999998 666544
No 355
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=30.81 E-value=2.3e+02 Score=23.58 Aligned_cols=20 Identities=10% Similarity=0.252 Sum_probs=14.1
Q ss_pred eEEEEeCCCcEEEeecCCceeE
Q 014644 49 MFILSTNDKTIKLWKVRDQKVK 70 (421)
Q Consensus 49 ~l~t~s~d~~v~lwd~~~~~~~ 70 (421)
+++.|+ ..+..||..+++-.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~ 26 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECY 26 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEE
T ss_pred EEEEcC--CceEEECCCCCeEe
Confidence 445555 56999999888743
No 356
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=30.31 E-value=2.3e+02 Score=23.37 Aligned_cols=22 Identities=14% Similarity=0.385 Sum_probs=15.9
Q ss_pred CCCEEEEeeCC-----CeEEEEecCCC
Q 014644 315 DGLHFATGSYS-----NLLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~d-----g~i~iwd~~~~ 336 (421)
++++++.|+.+ ..+.+||+.+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 67777777654 36889998765
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.32 E-value=4.2e+02 Score=25.71 Aligned_cols=32 Identities=13% Similarity=0.342 Sum_probs=22.1
Q ss_pred eEEEe-ecCCCCEEEEE-c-----CCcEEEEeCCCCceee
Q 014644 141 INSIS-NNSDCETFVSA-D-----DLRINLWNLEISDQCF 173 (421)
Q Consensus 141 v~~l~-~~~~~~~l~s~-~-----d~~i~lwd~~~~~~~~ 173 (421)
...+. ++|++++++.+ . -..++++|+. +++.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~-t~~~~ 169 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLE-KKDFV 169 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETT-TTEEC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECC-cCCcC
Confidence 34455 78999988874 2 2369999998 45444
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=26.68 E-value=70 Score=31.05 Aligned_cols=28 Identities=7% Similarity=-0.244 Sum_probs=22.9
Q ss_pred CCCCEEEEeeCCCeEEEEecCCCCCceeE
Q 014644 314 GDGLHFATGSYSNLLRIFSHGVGSAGGIT 342 (421)
Q Consensus 314 p~~~~l~~~s~dg~i~iwd~~~~~~~~~~ 342 (421)
.+..++++-+.|.++|+|++.++ .....
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~-~lv~t 256 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSF-TLIQD 256 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTT-EEEEE
T ss_pred cCCcEEEEEEcCCeEEEEEcCCC-ceEEe
Confidence 35789999999999999999998 43333
No 359
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=24.12 E-value=3.1e+02 Score=22.73 Aligned_cols=146 Identities=9% Similarity=-0.051 Sum_probs=76.0
Q ss_pred cceEEEeecCCCCEEEEEcCCcEEEEeCCCCceeeeeeecCCCCCCccCCCeeEEEEecCCCCeEEEEEcCCeEEEEECC
Q 014644 139 FNINSISNNSDCETFVSADDLRINLWNLEISDQCFNIVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMR 218 (421)
Q Consensus 139 ~~v~~l~~~~~~~~l~s~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d~~v~iwd~~ 218 (421)
..|..++...+...++ . ||.|..|-....+++-.. ......|..++.... ..++ -. ||.|..|-..
T Consensus 102 ~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg~~--------~~~~~~i~~i~~G~~--~~~~-l~-~G~v~~wG~n 167 (282)
T 3qhy_B 102 SGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTTVP--------AEAQSGVTALDGGVY--TALA-VK-NGGVIAWGDN 167 (282)
T ss_dssp SSEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTSCC--------GGGGSSEEEEEECSS--EEEE-EE-TTEEEEEECC
T ss_pred CCeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCCCC--------ccCCCCeEEEEcccC--EEEE-EE-CCEEEEecCC
Confidence 3577777665443444 4 999999987644443210 112345666655443 2333 34 7999999765
Q ss_pred cccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecCCeEEEEECCCCCcceeEEeeccCcccccccc
Q 014644 219 QSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPKLCDL 298 (421)
Q Consensus 219 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 298 (421)
.......+.. . ...|..++...+... +. .+|.|+.|-....++.-.......
T Consensus 168 ~~gqlg~p~~---~--------------~~~v~~i~~G~~hs~-al-~~G~v~~wG~n~~gqlg~p~~~~~--------- 219 (282)
T 3qhy_B 168 YFGQTTVPAE---A--------------QSGVDDVAGGIFHSL-AL-KDGKVIAWGDNRYKQTTVPTEALS--------- 219 (282)
T ss_dssp TTSTTSCCGG---G--------------GSSEEEEEECSSEEE-EE-ETTEEEEEECCTTSTTCCCGGGGS---------
T ss_pred CCCCCCCcee---c--------------CCCeEEEEecCCEEE-EE-ECCeEEEEECCCCCCCCCCcccCC---------
Confidence 4322110000 0 235677766644333 33 568999998765343311000000
Q ss_pred cCCCcceeeeEEEEcCCCCEEEEeeCCCeEEEEecCCC
Q 014644 299 YNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVG 336 (421)
Q Consensus 299 ~~~~~~~~~~~~~~sp~~~~l~~~s~dg~i~iwd~~~~ 336 (421)
.+..++-..... ++ -. ||.|+.|-....
T Consensus 220 -------~v~~i~~G~~h~-~a-l~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 220 -------GVSAIASGEWYS-LA-LK-NGKVIAWGSSRT 247 (282)
T ss_dssp -------SCCEEEECSSCE-EE-EE-TTEEEEESTTCC
T ss_pred -------CceEEEcCCCEE-EE-EE-CCEEEEecCCCC
Confidence 124555443332 33 33 899999976654
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.70 E-value=3.8e+02 Score=23.61 Aligned_cols=127 Identities=5% Similarity=0.089 Sum_probs=66.7
Q ss_pred cceEEEeec---CC----CCEEEEE--cCCcEEEEeCCCCceeeeeeec--CCC-----CCCcc----CCCeeEEEEecC
Q 014644 139 FNINSISNN---SD----CETFVSA--DDLRINLWNLEISDQCFNIVDM--KPS-----NMDDL----TEVITSAEFHPI 198 (421)
Q Consensus 139 ~~v~~l~~~---~~----~~~l~s~--~d~~i~lwd~~~~~~~~~~~~~--~~~-----~~~~~----~~~v~~~~~~p~ 198 (421)
..+..+++. |+ +.++..+ ...-|.++|+. .++..++..- .+. ...+. ...+..++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~-~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHK-KQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETT-TTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECC-CCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 456667665 22 3344444 56789999998 5666665521 010 00111 246888999997
Q ss_pred ----CCCeEEEEEcCCeEEEEECCcccccccchhhhccccccCCCccccccc--ccceeEEEEc-CCCCEEEEecC-CeE
Q 014644 199 ----YCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAAESHGSKSFFTEI--IASISDIKFA-NDGQHLLSRDY-MNL 270 (421)
Q Consensus 199 ----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~--~~~v~~~~~s-~~~~~l~~~~~-~~i 270 (421)
+ +.|+.....+. ++|.+.+.-+.+... . ...+.+... ...-..+++. .+|.++++--. ..|
T Consensus 231 ~~~~~-~~LYf~plss~-~ly~V~T~~L~~~~~---~------~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI 299 (381)
T 3q6k_A 231 DSEGN-RPAYYLAGSAI-KVYSVNTKELKQKGG---K------LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQV 299 (381)
T ss_dssp CTTSC-CEEEEEESSCS-EEEEEEHHHHSSTTC---C------CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEE
T ss_pred cCCCC-eEEEEEECCCC-cEEEEEHHHhhCcch---h------hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeE
Confidence 5 67777665542 455554432211100 0 000001111 1233456775 56766666544 899
Q ss_pred EEEECCC
Q 014644 271 KLWDIRM 277 (421)
Q Consensus 271 ~i~d~~~ 277 (421)
..|+..+
T Consensus 300 ~~w~~~~ 306 (381)
T 3q6k_A 300 SCWNTQK 306 (381)
T ss_dssp EEEETTS
T ss_pred EEEeCCC
Confidence 9999863
No 361
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=21.30 E-value=3.8e+02 Score=22.72 Aligned_cols=12 Identities=17% Similarity=0.157 Sum_probs=9.0
Q ss_pred CeEEEEECCccc
Q 014644 210 GFVRLVDMRQSA 221 (421)
Q Consensus 210 ~~v~iwd~~~~~ 221 (421)
..+.+||+.+.+
T Consensus 168 ~~v~~yd~~~~~ 179 (357)
T 2uvk_A 168 KFLLSFDPSTQQ 179 (357)
T ss_dssp CEEEEEETTTTE
T ss_pred ccEEEEeCCCCc
Confidence 578889987754
No 362
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=21.00 E-value=3.6e+02 Score=22.37 Aligned_cols=22 Identities=14% Similarity=0.211 Sum_probs=15.5
Q ss_pred CCCEEEEeeCCC-----eEEEEecCCC
Q 014644 315 DGLHFATGSYSN-----LLRIFSHGVG 336 (421)
Q Consensus 315 ~~~~l~~~s~dg-----~i~iwd~~~~ 336 (421)
++++++.|+.++ .+.+||..+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 667777776544 5888888765
No 363
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=20.49 E-value=5.8e+02 Score=24.55 Aligned_cols=158 Identities=9% Similarity=0.035 Sum_probs=74.6
Q ss_pred CCCCEEEEE-cC----CcEEEEeCCCCceeeeeeecC--CCCCCccCCCeeEEEEec-CCCCeEEEEEcC------CeEE
Q 014644 148 SDCETFVSA-DD----LRINLWNLEISDQCFNIVDMK--PSNMDDLTEVITSAEFHP-IYCNLLAYSSSR------GFVR 213 (421)
Q Consensus 148 ~~~~~l~s~-~d----~~i~lwd~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~d------~~v~ 213 (421)
.++..++.| .+ ..+.+||..+. .+..+... ...+...... .+++..+ ++ .+++.|+.+ ..+.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~--~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYD--KIDMKNIEVSSSEVPVARMC-HTFTTISRNN-QLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSS--CEEEEECCCCCSCCCCCCBS-CEEEEETTTT-EEEEECCBSSTTCBCCCCE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCC--eEEEeccCCCCCCCCccccc-eEEEEEccCC-EEEEEcCCCCCCCccccEE
Confidence 356666666 43 35788888733 23222100 0001111111 2233333 55 777777643 2477
Q ss_pred EEECCcccccccchhhhccccccCCCcccccccccceeEEEEcCCCCEEEEecC---CeEEEEECCCCCcceeEEeecc-
Q 014644 214 LVDMRQSALCDHSARILRDAAESHGSKSFFTEIIASISDIKFANDGQHLLSRDY---MNLKLWDIRMDSTPVATFKIHE- 289 (421)
Q Consensus 214 iwd~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---~~i~i~d~~~~~~~~~~~~~~~- 289 (421)
+||+.+.+-. .-...+. ...-.+++...++++++.|+. +.+.+||..+ ..... +....
T Consensus 472 ~yd~~t~~W~--------~~~~~p~--------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t-~~W~~-~~~~g~ 533 (695)
T 2zwa_A 472 IFDMKTREWS--------MIKSLSH--------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE-EIFKD-VTPKDE 533 (695)
T ss_dssp EEETTTTEEE--------ECCCCSB--------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT-TEEEE-CCCSSG
T ss_pred EEeCCCCcEE--------ECCCCCC--------CcccceEEEEcCCEEEEECCCCCCCCEEEEECCC-CceEE-ccCCCC
Confidence 8888774321 1000000 011122333236777777643 3789999875 33221 11100
Q ss_pred CcccccccccCCCcceeeeEEEEcCC-CCEEEEeeC--C-----CeEEEEecCCCC
Q 014644 290 HLRPKLCDLYNNDSIFDKFECSVSGD-GLHFATGSY--S-----NLLRIFSHGVGS 337 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~~s~--d-----g~i~iwd~~~~~ 337 (421)
.+.++. .-..+.+..+ ++.++.|+. + +.+.+||+.+..
T Consensus 534 ~p~~r~----------~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 534 FFQNSL----------VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp GGGSCC----------BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCccc----------ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 010000 0023555555 667777765 2 468899998764
Done!