Query 014646
Match_columns 421
No_of_seqs 515 out of 1271
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 07:09:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014646.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014646hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2.6E-38 5.7E-43 268.8 20.8 352 2-383 75-431 (448)
2 PRK10642 proline/glycine betai 100.0 1.2E-35 2.5E-40 277.0 28.4 335 2-380 68-424 (490)
3 COG2814 AraJ Arabinose efflux 100.0 2.4E-35 5.3E-40 254.6 27.7 324 2-384 59-384 (394)
4 PRK11663 regulatory protein Uh 100.0 3.4E-35 7.5E-40 270.0 27.8 350 2-382 69-420 (434)
5 PRK03545 putative arabinose tr 100.0 1.1E-34 2.3E-39 263.7 29.7 322 2-383 55-377 (390)
6 PRK10406 alpha-ketoglutarate t 100.0 1.1E-34 2.4E-39 266.6 29.0 325 3-383 75-421 (432)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.5E-35 7.5E-40 267.7 25.2 347 2-374 54-409 (412)
8 PRK09556 uhpT sugar phosphate 100.0 3E-35 6.4E-40 273.0 24.2 348 2-383 75-446 (467)
9 TIGR01299 synapt_SV2 synaptic 100.0 7.2E-35 1.6E-39 276.3 26.8 371 2-383 213-731 (742)
10 TIGR00903 2A0129 major facilit 100.0 1.1E-34 2.4E-39 258.7 26.1 325 2-382 37-361 (368)
11 KOG1330 Sugar transporter/spin 100.0 1.9E-36 4.1E-41 260.0 13.8 326 2-365 79-417 (493)
12 PRK09952 shikimate transporter 100.0 4.5E-34 9.8E-39 262.5 29.5 333 2-383 75-430 (438)
13 TIGR00893 2A0114 d-galactonate 100.0 5.9E-34 1.3E-38 260.4 26.9 352 2-382 40-395 (399)
14 TIGR00887 2A0109 phosphate:H+ 100.0 5.5E-34 1.2E-38 266.7 26.9 370 2-398 67-499 (502)
15 PRK11273 glpT sn-glycerol-3-ph 100.0 1.8E-33 4E-38 259.9 28.9 353 2-385 74-434 (452)
16 PRK11551 putative 3-hydroxyphe 100.0 2.4E-33 5.2E-38 256.6 27.7 329 2-380 61-390 (406)
17 PRK09705 cynX putative cyanate 100.0 5.4E-33 1.2E-37 252.1 28.6 321 2-383 55-378 (393)
18 TIGR00894 2A0114euk Na(+)-depe 100.0 4E-33 8.6E-38 259.3 26.2 348 2-382 87-446 (465)
19 TIGR00898 2A0119 cation transp 100.0 4.8E-33 1E-37 261.7 26.9 353 2-383 138-492 (505)
20 TIGR00892 2A0113 monocarboxyla 100.0 1.5E-33 3.2E-38 260.0 22.1 351 3-383 66-418 (455)
21 TIGR00900 2A0121 H+ Antiporter 100.0 8.4E-33 1.8E-37 249.8 25.9 313 2-362 45-365 (365)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 9.6E-33 2.1E-37 250.6 25.8 322 2-377 49-373 (377)
23 PRK15075 citrate-proton sympor 100.0 5.5E-32 1.2E-36 248.9 29.6 306 5-363 70-397 (434)
24 PRK10077 xylE D-xylose transpo 100.0 1.4E-32 3.1E-37 257.1 26.1 370 2-401 66-471 (479)
25 PLN00028 nitrate transmembrane 100.0 1.4E-32 3E-37 254.8 25.5 338 2-386 82-433 (476)
26 PRK10213 nepI ribonucleoside t 100.0 7.3E-32 1.6E-36 244.4 29.4 313 2-375 66-380 (394)
27 KOG2532 Permease of the major 100.0 2E-32 4.3E-37 247.2 24.5 349 2-383 84-444 (466)
28 PRK10091 MFS transport protein 100.0 9.9E-32 2.1E-36 243.3 27.9 322 2-383 49-373 (382)
29 TIGR00881 2A0104 phosphoglycer 100.0 1.5E-32 3.4E-37 249.4 22.5 333 2-366 41-377 (379)
30 PRK10489 enterobactin exporter 100.0 6.3E-32 1.4E-36 247.8 26.4 322 2-377 63-390 (417)
31 PRK12307 putative sialic acid 100.0 1.5E-31 3.2E-36 246.4 27.9 316 2-362 64-385 (426)
32 PRK03699 putative transporter; 100.0 2.7E-31 5.8E-36 241.5 28.6 322 2-383 53-377 (394)
33 TIGR00891 2A0112 putative sial 100.0 8.9E-32 1.9E-36 246.7 25.5 337 2-370 58-400 (405)
34 TIGR00712 glpT glycerol-3-phos 100.0 1.8E-31 3.9E-36 245.8 26.7 350 2-383 72-430 (438)
35 TIGR00883 2A0106 metabolite-pr 100.0 2.1E-31 4.5E-36 243.3 26.8 318 4-373 48-388 (394)
36 KOG0569 Permease of the major 100.0 1.4E-31 3E-36 238.6 24.5 380 2-405 71-472 (485)
37 PRK14995 methyl viologen resis 100.0 1.4E-31 3.1E-36 249.6 25.8 342 2-360 52-413 (495)
38 TIGR00879 SP MFS transporter, 100.0 1.2E-31 2.5E-36 251.6 24.9 367 2-383 82-467 (481)
39 PRK15402 multidrug efflux syst 100.0 8.9E-31 1.9E-35 239.4 28.9 310 2-364 59-374 (406)
40 PRK11646 multidrug resistance 100.0 8E-31 1.7E-35 238.1 27.5 303 4-363 59-362 (400)
41 PRK05122 major facilitator sup 100.0 9.7E-31 2.1E-35 238.8 27.7 317 2-383 62-386 (399)
42 TIGR00899 2A0120 sugar efflux 100.0 1.6E-30 3.5E-35 235.7 28.4 322 3-382 45-370 (375)
43 PRK15403 multidrug efflux syst 100.0 1.5E-30 3.2E-35 237.2 27.4 319 2-374 62-385 (413)
44 PF07690 MFS_1: Major Facilita 100.0 2.1E-31 4.4E-36 239.5 21.5 305 2-351 43-352 (352)
45 TIGR00710 efflux_Bcr_CflA drug 100.0 2.3E-30 4.9E-35 235.7 27.7 304 2-359 51-360 (385)
46 PRK10504 putative transporter; 100.0 2.6E-30 5.6E-35 241.1 28.0 343 2-362 56-417 (471)
47 PRK09874 drug efflux system pr 100.0 2E-30 4.3E-35 237.8 26.8 326 2-383 65-395 (408)
48 KOG2533 Permease of the major 100.0 1.4E-31 3.1E-36 242.0 18.3 319 2-353 92-423 (495)
49 PRK03893 putative sialic acid 100.0 1.7E-30 3.8E-35 244.0 26.3 350 2-374 66-441 (496)
50 PRK11195 lysophospholipid tran 100.0 2E-30 4.4E-35 234.9 25.5 331 2-387 49-381 (393)
51 PRK15034 nitrate/nitrite trans 100.0 8.6E-30 1.9E-34 228.5 29.1 321 2-383 81-451 (462)
52 TIGR00711 efflux_EmrB drug res 100.0 1E-30 2.2E-35 245.2 23.9 343 2-361 48-411 (485)
53 PRK10473 multidrug efflux syst 100.0 6.3E-30 1.4E-34 232.8 28.2 301 2-362 49-351 (392)
54 TIGR00897 2A0118 polyol permea 100.0 1.4E-29 3.1E-34 230.7 30.3 327 2-382 59-397 (402)
55 TIGR00895 2A0115 benzoate tran 100.0 1.3E-30 2.8E-35 238.4 21.7 334 2-357 63-397 (398)
56 COG2223 NarK Nitrate/nitrite t 100.0 1.4E-29 3.1E-34 216.2 25.9 322 5-383 63-398 (417)
57 PRK12382 putative transporter; 100.0 1.3E-29 2.8E-34 230.7 27.7 317 2-383 62-386 (392)
58 PRK11102 bicyclomycin/multidru 100.0 2.9E-29 6.3E-34 227.5 28.1 302 2-354 37-343 (377)
59 PRK03633 putative MFS family t 100.0 4.4E-29 9.5E-34 226.1 27.4 313 2-379 52-365 (381)
60 PRK10133 L-fucose transporter; 100.0 7.4E-29 1.6E-33 227.1 29.0 318 2-374 72-421 (438)
61 PRK11010 ampG muropeptide tran 100.0 1.1E-28 2.5E-33 229.0 29.6 325 6-383 60-400 (491)
62 cd06174 MFS The Major Facilita 100.0 7.5E-29 1.6E-33 222.8 27.6 302 2-382 45-348 (352)
63 PRK15011 sugar efflux transpor 100.0 2E-28 4.3E-33 222.5 28.3 321 3-383 64-388 (393)
64 KOG2504 Monocarboxylate transp 100.0 2.7E-29 5.8E-34 229.8 22.0 377 4-386 94-476 (509)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 3.1E-28 6.8E-33 221.0 28.7 314 2-373 49-399 (410)
66 PRK11043 putative transporter; 100.0 2.8E-28 6.1E-33 222.7 28.1 300 2-360 52-357 (401)
67 PRK06814 acylglycerophosphoeth 100.0 8E-29 1.7E-33 254.3 26.7 323 2-373 63-409 (1140)
68 TIGR00896 CynX cyanate transpo 100.0 4.7E-28 1E-32 217.5 26.8 305 2-366 46-354 (355)
69 PF05977 MFS_3: Transmembrane 100.0 6E-28 1.3E-32 222.1 27.9 329 3-383 57-391 (524)
70 PRK11652 emrD multidrug resist 100.0 5.2E-28 1.1E-32 220.4 26.4 303 2-360 54-360 (394)
71 PRK10054 putative transporter; 100.0 1.9E-28 4E-33 222.3 23.1 314 2-373 54-371 (395)
72 KOG0254 Predicted transporter 100.0 1.9E-28 4.2E-33 229.4 23.8 384 2-403 100-499 (513)
73 TIGR00902 2A0127 phenyl propri 100.0 7.3E-28 1.6E-32 218.0 26.6 317 3-379 51-372 (382)
74 PRK08633 2-acyl-glycerophospho 100.0 5.1E-28 1.1E-32 249.4 28.5 312 2-359 58-383 (1146)
75 TIGR00805 oat sodium-independe 100.0 3.1E-28 6.7E-33 230.9 24.1 336 2-361 79-582 (633)
76 TIGR00886 2A0108 nitrite extru 100.0 9.2E-28 2E-32 216.9 23.6 300 2-344 48-364 (366)
77 PF00083 Sugar_tr: Sugar (and 100.0 1.3E-33 2.9E-38 261.9 -17.5 372 1-401 56-450 (451)
78 KOG0255 Synaptic vesicle trans 100.0 5.4E-27 1.2E-31 221.0 25.9 336 1-359 128-467 (521)
79 KOG0253 Synaptic vesicle trans 100.0 7E-27 1.5E-31 194.6 22.5 363 1-383 123-516 (528)
80 PRK11128 putative 3-phenylprop 100.0 1.7E-26 3.7E-31 209.2 26.5 314 2-375 50-368 (382)
81 PRK11902 ampG muropeptide tran 100.0 4.6E-26 1E-30 207.8 29.3 318 6-380 47-384 (402)
82 KOG3764 Vesicular amine transp 100.0 1.2E-27 2.6E-32 201.6 14.6 325 4-383 119-451 (464)
83 TIGR00901 2A0125 AmpG-related 100.0 5.1E-26 1.1E-30 204.4 26.2 284 8-342 38-354 (356)
84 PRK09528 lacY galactoside perm 100.0 1.9E-26 4.2E-31 211.6 22.6 332 2-382 57-399 (420)
85 TIGR00792 gph sugar (Glycoside 100.0 4E-26 8.8E-31 211.1 24.9 309 3-362 47-382 (437)
86 TIGR00889 2A0110 nucleoside tr 100.0 9.3E-26 2E-30 205.8 26.5 325 2-383 49-399 (418)
87 COG0738 FucP Fucose permease [ 100.0 1.4E-25 3E-30 190.6 25.4 306 2-364 59-388 (422)
88 KOG0252 Inorganic phosphate tr 99.9 7.9E-28 1.7E-32 206.3 11.6 376 2-402 95-512 (538)
89 TIGR00882 2A0105 oligosacchari 99.9 1.6E-25 3.5E-30 203.9 24.9 329 2-381 49-390 (396)
90 KOG2615 Permease of the major 99.9 2E-26 4.3E-31 193.1 16.9 342 2-373 79-427 (451)
91 TIGR00806 rfc RFC reduced fola 99.9 1.6E-25 3.4E-30 197.0 20.9 327 2-346 73-402 (511)
92 PRK10207 dipeptide/tripeptide 99.9 1.7E-24 3.7E-29 200.1 25.9 343 6-357 65-438 (489)
93 TIGR00924 yjdL_sub1_fam amino 99.9 6.1E-24 1.3E-28 196.4 27.5 374 2-380 59-462 (475)
94 PF06609 TRI12: Fungal trichot 99.9 1E-23 2.2E-28 193.4 27.0 344 2-357 89-464 (599)
95 COG2807 CynX Cyanate permease 99.9 1.4E-23 3.1E-28 175.6 25.4 322 2-382 58-381 (395)
96 TIGR02718 sider_RhtX_FptX side 99.9 9.9E-23 2.1E-27 185.3 27.7 316 6-378 53-383 (390)
97 PF11700 ATG22: Vacuole efflux 99.9 4.8E-22 1E-26 181.3 30.8 337 4-383 83-465 (477)
98 PTZ00207 hypothetical protein; 99.9 6.6E-23 1.4E-27 189.4 22.2 375 5-384 75-550 (591)
99 PRK09584 tppB putative tripept 99.9 1.9E-21 4E-26 181.0 27.6 333 7-353 73-437 (500)
100 TIGR01272 gluP glucose/galacto 99.9 2.3E-21 4.9E-26 169.1 25.8 275 39-370 5-299 (310)
101 KOG3626 Organic anion transpor 99.9 2.9E-21 6.3E-26 178.2 26.5 336 2-361 143-650 (735)
102 PRK09669 putative symporter Ya 99.9 2.8E-21 6.1E-26 178.6 23.1 305 4-362 58-390 (444)
103 PRK10429 melibiose:sodium symp 99.9 4.2E-21 9.1E-26 178.4 23.9 309 5-362 56-395 (473)
104 PF13347 MFS_2: MFS/sugar tran 99.9 1.7E-20 3.7E-25 172.5 22.8 306 5-362 51-386 (428)
105 COG2270 Permeases of the major 99.9 3.9E-20 8.4E-25 158.8 23.0 333 4-383 71-426 (438)
106 TIGR01301 GPH_sucrose GPH fami 99.9 9.6E-20 2.1E-24 165.1 26.7 342 3-382 51-467 (477)
107 PF03825 Nuc_H_symport: Nucleo 99.9 1.2E-19 2.6E-24 162.7 25.8 307 3-362 49-366 (400)
108 TIGR00788 fbt folate/biopterin 99.9 1.7E-20 3.7E-25 173.1 18.3 317 8-362 77-415 (468)
109 PRK15462 dipeptide/tripeptide 99.9 6.7E-19 1.4E-23 160.4 28.3 126 4-130 58-187 (493)
110 PF03137 OATP: Organic Anion T 99.9 5.9E-23 1.3E-27 189.9 -0.2 342 2-361 49-515 (539)
111 KOG4686 Predicted sugar transp 99.8 6.7E-20 1.4E-24 147.9 16.7 317 5-371 93-425 (459)
112 PRK11462 putative transporter; 99.8 7E-19 1.5E-23 162.4 25.5 303 5-362 59-389 (460)
113 PRK09848 glucuronide transport 99.8 5.2E-19 1.1E-23 163.8 23.4 305 3-362 56-390 (448)
114 PF01306 LacY_symp: LacY proto 99.8 6.7E-18 1.5E-22 148.5 22.3 329 4-382 56-396 (412)
115 COG2211 MelB Na+/melibiose sym 99.8 7.7E-17 1.7E-21 143.2 25.2 308 5-362 62-398 (467)
116 KOG2563 Permease of the major 99.8 2.8E-17 6.2E-22 142.0 17.3 312 4-362 92-423 (480)
117 COG3104 PTR2 Dipeptide/tripept 99.8 1.7E-16 3.7E-21 139.7 22.3 374 6-382 76-483 (498)
118 PF03209 PUCC: PUCC protein; 99.7 1.7E-14 3.6E-19 124.8 27.6 305 7-361 30-364 (403)
119 KOG2816 Predicted transporter 99.7 3E-15 6.4E-20 135.4 20.3 314 4-361 75-393 (463)
120 TIGR00880 2_A_01_02 Multidrug 99.7 1.9E-16 4E-21 122.2 10.2 132 2-133 9-140 (141)
121 PF01770 Folate_carrier: Reduc 99.6 2.8E-13 6.1E-18 118.8 24.0 327 4-342 54-385 (412)
122 PF03092 BT1: BT1 family; Int 99.6 1.5E-13 3.3E-18 125.4 16.8 318 7-362 40-382 (433)
123 TIGR00889 2A0110 nucleoside tr 99.5 8.9E-14 1.9E-18 127.2 10.0 131 4-134 264-405 (418)
124 TIGR01299 synapt_SV2 synaptic 99.5 5.6E-14 1.2E-18 134.6 9.0 132 2-135 606-737 (742)
125 PRK10054 putative transporter; 99.5 2.7E-12 5.8E-17 116.8 18.3 169 204-380 7-176 (395)
126 KOG2325 Predicted transporter/ 99.5 1.2E-12 2.5E-17 117.1 14.1 336 2-382 82-471 (488)
127 PRK10642 proline/glycine betai 99.5 4.9E-13 1.1E-17 125.2 11.7 136 2-138 297-436 (490)
128 PRK11663 regulatory protein Uh 99.5 6.7E-12 1.5E-16 115.8 19.1 167 204-378 23-190 (434)
129 PRK05122 major facilitator sup 99.4 5.2E-13 1.1E-17 122.1 10.4 129 3-131 261-389 (399)
130 TIGR00900 2A0121 H+ Antiporter 99.4 2.7E-12 5.9E-17 115.9 14.7 164 210-380 5-173 (365)
131 PF07690 MFS_1: Major Facilita 99.4 7.6E-12 1.7E-16 112.4 16.2 164 211-381 3-167 (352)
132 TIGR00924 yjdL_sub1_fam amino 99.4 9.3E-12 2E-16 115.6 17.0 172 204-382 10-188 (475)
133 COG2271 UhpC Sugar phosphate p 99.4 6.6E-12 1.4E-16 108.5 14.1 174 202-383 27-203 (448)
134 PRK10489 enterobactin exporter 99.4 8.6E-12 1.9E-16 114.7 15.9 179 195-380 8-191 (417)
135 PRK15462 dipeptide/tripeptide 99.4 1.8E-11 4E-16 112.1 17.6 174 203-383 8-186 (493)
136 PRK09874 drug efflux system pr 99.4 1.2E-12 2.6E-17 120.2 9.0 128 4-131 271-398 (408)
137 PF05631 DUF791: Protein of un 99.4 3.7E-11 8E-16 102.7 17.1 215 3-265 81-304 (354)
138 PRK09528 lacY galactoside perm 99.4 8E-13 1.7E-17 121.6 7.7 129 3-131 274-403 (420)
139 PRK12382 putative transporter; 99.4 1.3E-12 2.8E-17 119.2 8.8 128 3-130 261-388 (392)
140 PRK11646 multidrug resistance 99.4 3.7E-11 7.9E-16 109.6 17.9 165 207-379 13-178 (400)
141 TIGR00712 glpT glycerol-3-phos 99.4 3.7E-11 8.1E-16 111.1 17.3 172 202-381 25-201 (438)
142 TIGR00893 2A0114 d-galactonate 99.4 1.5E-11 3.2E-16 112.4 14.5 153 221-381 11-164 (399)
143 TIGR00891 2A0112 putative sial 99.4 4E-11 8.7E-16 110.0 16.9 163 204-373 12-176 (405)
144 TIGR02332 HpaX 4-hydroxyphenyl 99.3 4.1E-11 8.9E-16 109.7 16.4 167 206-379 10-182 (412)
145 PRK10504 putative transporter; 99.3 8.3E-11 1.8E-15 110.1 18.7 169 204-380 10-179 (471)
146 TIGR00881 2A0104 phosphoglycer 99.3 1.7E-11 3.6E-16 111.4 13.1 158 214-379 5-164 (379)
147 PRK03699 putative transporter; 99.3 1.5E-10 3.3E-15 105.6 19.2 170 204-380 7-177 (394)
148 PRK10207 dipeptide/tripeptide 99.3 8.1E-11 1.8E-15 109.5 17.5 174 203-383 13-191 (489)
149 TIGR00895 2A0115 benzoate tran 99.3 1.6E-11 3.5E-16 112.3 12.7 154 216-377 29-183 (398)
150 TIGR00710 efflux_Bcr_CflA drug 99.3 6.9E-11 1.5E-15 107.7 16.3 157 217-381 18-175 (385)
151 COG2814 AraJ Arabinose efflux 99.3 1.1E-10 2.5E-15 102.1 16.6 172 204-383 13-185 (394)
152 PRK09584 tppB putative tripept 99.3 1.3E-10 2.7E-15 108.8 18.1 176 200-382 16-197 (500)
153 TIGR00886 2A0108 nitrite extru 99.3 1.3E-10 2.9E-15 105.0 17.8 147 206-359 3-151 (366)
154 PRK11195 lysophospholipid tran 99.3 1E-10 2.2E-15 106.4 17.0 157 204-372 3-160 (393)
155 PRK10473 multidrug efflux syst 99.3 1.4E-10 2.9E-15 105.9 16.6 161 213-381 12-173 (392)
156 PRK10091 MFS transport protein 99.3 1.6E-10 3.5E-15 105.0 16.9 168 204-379 3-171 (382)
157 PRK03545 putative arabinose tr 99.3 1.4E-10 3E-15 105.7 16.5 148 225-380 30-178 (390)
158 PRK10213 nepI ribonucleoside t 99.3 2.3E-10 5E-15 104.2 17.7 145 224-376 40-185 (394)
159 PRK14995 methyl viologen resis 99.3 2.4E-10 5.3E-15 107.2 18.3 167 206-380 8-176 (495)
160 TIGR00711 efflux_EmrB drug res 99.3 1.5E-10 3.3E-15 108.8 17.0 164 209-380 7-171 (485)
161 PRK12307 putative sialic acid 99.3 2.5E-10 5.3E-15 105.5 17.3 159 206-372 20-179 (426)
162 PF02487 CLN3: CLN3 protein; 99.3 9.9E-10 2.1E-14 96.7 19.7 309 6-352 74-389 (402)
163 PRK11551 putative 3-hydroxyphe 99.3 2.9E-10 6.2E-15 104.3 17.3 159 212-378 23-182 (406)
164 PRK15011 sugar efflux transpor 99.3 3.1E-11 6.7E-16 110.0 10.3 125 5-130 266-390 (393)
165 PF06963 FPN1: Ferroportin1 (F 99.3 6.6E-09 1.4E-13 93.3 24.7 318 4-345 51-404 (432)
166 PRK11273 glpT sn-glycerol-3-ph 99.2 7.7E-10 1.7E-14 102.8 19.5 148 223-379 48-201 (452)
167 PLN00028 nitrate transmembrane 99.2 9.4E-10 2E-14 102.7 20.1 153 222-382 54-215 (476)
168 PF05977 MFS_3: Transmembrane 99.2 7.2E-10 1.6E-14 103.1 19.0 177 199-382 5-186 (524)
169 PRK11043 putative transporter; 99.2 4.6E-10 1E-14 102.8 17.6 157 218-381 17-176 (401)
170 KOG3098 Uncharacterized conser 99.2 6.2E-09 1.3E-13 93.4 23.6 306 4-351 63-405 (461)
171 PRK15034 nitrate/nitrite trans 99.2 8.4E-10 1.8E-14 100.2 18.0 147 203-356 33-185 (462)
172 PRK03893 putative sialic acid 99.2 6.2E-10 1.3E-14 105.0 17.7 158 205-370 21-179 (496)
173 cd06174 MFS The Major Facilita 99.2 5.2E-10 1.1E-14 100.4 15.8 162 210-379 5-167 (352)
174 KOG1330 Sugar transporter/spin 99.2 8.3E-11 1.8E-15 102.9 9.7 154 232-391 60-214 (493)
175 TIGR00899 2A0120 sugar efflux 99.2 1E-09 2.2E-14 99.6 16.8 164 211-381 4-171 (375)
176 TIGR00897 2A0118 polyol permea 99.2 1E-09 2.3E-14 100.3 16.9 153 203-362 12-170 (402)
177 PRK11652 emrD multidrug resist 99.2 1.3E-09 2.8E-14 99.5 17.6 153 218-378 22-175 (394)
178 TIGR00890 2A0111 Oxalate/Forma 99.2 6E-10 1.3E-14 101.1 15.0 154 220-382 19-173 (377)
179 PRK11102 bicyclomycin/multidru 99.2 6.6E-10 1.4E-14 100.9 15.3 150 222-379 9-159 (377)
180 TIGR00903 2A0129 major facilit 99.2 1E-09 2.2E-14 98.5 16.0 154 219-381 6-160 (368)
181 PRK03633 putative MFS family t 99.2 1.2E-09 2.6E-14 99.2 16.7 151 203-360 5-156 (381)
182 TIGR00879 SP MFS transporter, 99.2 1.1E-10 2.5E-15 109.5 10.1 132 3-134 331-473 (481)
183 TIGR00892 2A0113 monocarboxyla 99.2 1.1E-09 2.4E-14 101.6 16.5 151 223-382 38-190 (455)
184 PRK15402 multidrug efflux syst 99.2 2.2E-09 4.8E-14 98.5 17.6 150 223-380 32-182 (406)
185 KOG2615 Permease of the major 99.2 2.7E-10 5.9E-15 97.0 10.3 119 243-368 72-193 (451)
186 PRK15403 multidrug efflux syst 99.2 2.4E-09 5.2E-14 98.1 17.3 142 232-380 43-185 (413)
187 TIGR00902 2A0127 phenyl propri 99.1 2.3E-10 4.9E-15 103.9 9.9 122 3-126 252-374 (382)
188 PRK09705 cynX putative cyanate 99.1 3.3E-09 7.1E-14 96.7 16.6 146 221-374 26-172 (393)
189 PRK09556 uhpT sugar phosphate 99.1 1.2E-09 2.6E-14 102.0 13.8 151 221-378 46-204 (467)
190 TIGR00885 fucP L-fucose:H+ sym 99.1 5.1E-09 1.1E-13 95.7 17.6 146 206-358 5-154 (410)
191 TIGR00882 2A0105 oligosacchari 99.1 2.4E-09 5.2E-14 97.8 15.5 169 203-381 1-178 (396)
192 PRK10077 xylE D-xylose transpo 99.1 2.7E-10 5.9E-15 107.0 9.5 131 4-134 319-460 (479)
193 TIGR00887 2A0109 phosphate:H+ 99.1 3.5E-09 7.5E-14 99.8 16.7 110 243-358 60-175 (502)
194 TIGR00806 rfc RFC reduced fola 99.1 1E-08 2.3E-13 91.7 18.0 128 227-362 48-177 (511)
195 TIGR00769 AAA ADP/ATP carrier 99.1 2.9E-07 6.3E-12 83.9 27.6 307 8-356 61-435 (472)
196 PF06609 TRI12: Fungal trichot 99.1 1.1E-08 2.4E-13 95.1 17.2 152 225-385 65-216 (599)
197 TIGR00898 2A0119 cation transp 99.1 5.9E-10 1.3E-14 105.3 9.2 128 5-135 369-498 (505)
198 KOG3810 Micronutrient transpor 99.1 4.1E-09 8.9E-14 88.6 12.8 311 4-341 55-370 (433)
199 KOG3762 Predicted transporter 99.1 6.3E-09 1.4E-13 92.9 14.6 187 194-386 361-547 (618)
200 TIGR00894 2A0114euk Na(+)-depe 99.0 2.7E-09 5.8E-14 99.7 13.0 142 235-382 71-215 (465)
201 TIGR00880 2_A_01_02 Multidrug 99.0 3.1E-09 6.7E-14 81.5 11.2 128 247-381 6-133 (141)
202 PRK09952 shikimate transporter 99.0 1.8E-08 3.9E-13 93.2 17.3 162 207-374 25-208 (438)
203 PRK10133 L-fucose transporter; 99.0 3.6E-08 7.7E-13 91.0 19.2 145 207-358 29-177 (438)
204 PRK08633 2-acyl-glycerophospho 99.0 1.1E-08 2.3E-13 106.7 17.5 156 199-360 4-165 (1146)
205 PRK06814 acylglycerophosphoeth 99.0 1.2E-08 2.6E-13 106.1 17.6 163 199-368 6-177 (1140)
206 PRK11902 ampG muropeptide tran 99.0 2.7E-08 5.8E-13 91.1 17.2 162 212-380 7-176 (402)
207 PTZ00207 hypothetical protein; 99.0 3.9E-08 8.5E-13 92.1 18.1 154 220-384 43-203 (591)
208 TIGR00883 2A0106 metabolite-pr 99.0 8E-10 1.7E-14 100.9 6.6 118 3-120 267-390 (394)
209 PRK10406 alpha-ketoglutarate t 99.0 4E-08 8.7E-13 90.8 17.5 123 246-375 70-208 (432)
210 PRK11010 ampG muropeptide tran 99.0 7E-08 1.5E-12 90.4 18.8 174 201-381 9-190 (491)
211 KOG3764 Vesicular amine transp 99.0 1.1E-08 2.4E-13 88.0 11.8 134 244-384 111-245 (464)
212 PRK11128 putative 3-phenylprop 98.9 3.5E-08 7.7E-13 89.7 15.8 156 213-376 13-169 (382)
213 TIGR01301 GPH_sucrose GPH fami 98.9 4.5E-08 9.7E-13 89.7 16.2 143 208-357 8-175 (477)
214 PF11700 ATG22: Vacuole efflux 98.9 5.8E-09 1.3E-13 96.0 10.4 128 3-130 329-467 (477)
215 COG2223 NarK Nitrate/nitrite t 98.9 2.1E-08 4.5E-13 87.3 13.0 167 204-379 14-186 (417)
216 PRK15075 citrate-proton sympor 98.9 4.8E-08 1E-12 90.4 16.5 159 205-371 16-197 (434)
217 TIGR00792 gph sugar (Glycoside 98.9 3.8E-09 8.3E-14 98.0 8.9 108 2-109 268-383 (437)
218 KOG4332 Predicted sugar transp 98.9 7.8E-08 1.7E-12 78.2 14.2 290 4-344 85-391 (454)
219 TIGR00926 2A1704 Peptide:H+ sy 98.9 5.9E-07 1.3E-11 85.8 22.6 125 6-130 38-181 (654)
220 TIGR00805 oat sodium-independe 98.9 1.9E-08 4.1E-13 96.6 11.4 126 230-361 58-235 (633)
221 TIGR00896 CynX cyanate transpo 98.8 6.8E-08 1.5E-12 86.9 14.1 142 224-374 20-163 (355)
222 TIGR00901 2A0125 AmpG-related 98.8 8.9E-08 1.9E-12 86.2 14.3 150 223-379 7-171 (356)
223 TIGR02718 sider_RhtX_FptX side 98.8 1.5E-08 3.3E-13 92.3 9.4 122 4-125 257-385 (390)
224 KOG0253 Synaptic vesicle trans 98.8 1.3E-08 2.8E-13 86.6 8.0 123 6-130 396-518 (528)
225 PF01306 LacY_symp: LacY proto 98.8 1.7E-08 3.8E-13 89.6 8.9 128 6-133 274-402 (412)
226 COG3104 PTR2 Dipeptide/tripept 98.8 6.4E-08 1.4E-12 86.3 11.5 177 203-386 20-206 (498)
227 KOG0637 Sucrose transporter an 98.7 1.9E-07 4.1E-12 82.1 12.0 99 5-103 81-202 (498)
228 COG0738 FucP Fucose permease [ 98.7 1.7E-06 3.7E-11 75.2 16.6 133 222-360 30-166 (422)
229 KOG0255 Synaptic vesicle trans 98.7 1.2E-07 2.6E-12 89.9 10.2 130 243-382 122-251 (521)
230 COG0477 ProP Permeases of the 98.7 9.8E-08 2.1E-12 84.1 8.7 119 3-121 51-175 (338)
231 PF03825 Nuc_H_symport: Nucleo 98.7 1.7E-07 3.8E-12 84.6 10.2 126 7-132 259-396 (400)
232 KOG2532 Permease of the major 98.6 2.9E-07 6.3E-12 84.4 11.6 145 235-385 68-215 (466)
233 KOG3762 Predicted transporter 98.6 5.7E-08 1.2E-12 86.9 6.7 129 3-131 418-547 (618)
234 COG2270 Permeases of the major 98.6 4.7E-08 1E-12 85.2 6.0 117 4-120 301-418 (438)
235 KOG2533 Permease of the major 98.6 6.1E-07 1.3E-11 82.6 13.1 135 243-383 85-224 (495)
236 KOG0569 Permease of the major 98.6 3.4E-07 7.3E-12 83.2 11.2 131 5-136 319-459 (485)
237 PRK09848 glucuronide transport 98.6 1.1E-07 2.4E-12 88.4 7.9 107 3-109 276-391 (448)
238 PRK09669 putative symporter Ya 98.6 1.8E-06 3.9E-11 80.2 15.2 149 211-360 16-172 (444)
239 PRK11462 putative transporter; 98.6 3.2E-06 6.9E-11 78.6 16.7 151 211-362 16-174 (460)
240 PF06813 Nodulin-like: Nodulin 98.6 4.1E-06 8.9E-11 69.7 15.2 126 3-130 49-181 (250)
241 PF03219 TLC: TLC ATP/ADP tran 98.6 6.6E-05 1.4E-09 69.1 24.2 229 5-269 73-349 (491)
242 TIGR01272 gluP glucose/galacto 98.6 2.5E-07 5.5E-12 81.0 8.3 114 2-118 189-302 (310)
243 KOG2504 Monocarboxylate transp 98.5 2E-06 4.4E-11 80.0 13.7 152 226-386 68-221 (509)
244 PRK10429 melibiose:sodium symp 98.5 3.8E-06 8.3E-11 78.6 15.7 147 210-357 12-166 (473)
245 PF13000 Acatn: Acetyl-coenzym 98.5 0.00021 4.6E-09 64.3 24.7 56 305-361 413-468 (544)
246 KOG0254 Predicted transporter 98.4 2.3E-06 5E-11 80.9 11.9 133 242-381 92-225 (513)
247 TIGR00788 fbt folate/biopterin 98.4 6.8E-07 1.5E-11 83.2 8.2 106 3-108 300-415 (468)
248 PF13347 MFS_2: MFS/sugar tran 98.4 1.6E-06 3.4E-11 80.2 10.2 148 214-362 11-168 (428)
249 PF00854 PTR2: POT family; In 98.4 3.4E-06 7.3E-11 76.3 11.9 109 22-130 2-122 (372)
250 PF00083 Sugar_tr: Sugar (and 98.4 1.9E-08 4.1E-13 93.7 -3.0 126 243-375 50-181 (451)
251 KOG1237 H+/oligopeptide sympor 98.4 0.00011 2.3E-09 69.3 21.1 125 6-130 88-244 (571)
252 COG2211 MelB Na+/melibiose sym 98.3 1.6E-05 3.5E-10 71.8 14.3 154 208-362 16-177 (467)
253 KOG3574 Acetyl-CoA transporter 98.3 5.8E-05 1.3E-09 65.1 16.6 304 9-361 81-432 (510)
254 COG3202 ATP/ADP translocase [E 98.3 0.0016 3.5E-08 58.7 24.4 230 4-269 75-352 (509)
255 COG2807 CynX Cyanate permease 98.3 4.8E-05 1E-09 65.5 14.4 143 233-383 40-183 (395)
256 KOG4686 Predicted sugar transp 98.3 5.8E-06 1.2E-10 68.3 8.5 120 5-126 314-438 (459)
257 PF06813 Nodulin-like: Nodulin 98.2 3.2E-05 6.9E-10 64.5 12.8 123 219-349 17-147 (250)
258 PF05978 UNC-93: Ion channel r 98.2 4.8E-06 1E-10 63.8 7.3 99 4-103 50-148 (156)
259 KOG0252 Inorganic phosphate tr 98.1 2.6E-06 5.6E-11 75.2 4.3 132 3-135 360-501 (538)
260 TIGR00939 2a57 Equilibrative N 98.1 0.00038 8.2E-09 63.8 18.0 55 296-351 371-425 (437)
261 KOG2325 Predicted transporter/ 98.0 8.1E-05 1.8E-09 67.6 12.2 136 243-384 75-227 (488)
262 PF03209 PUCC: PUCC protein; 97.9 0.00017 3.8E-09 63.5 12.0 111 246-362 22-153 (403)
263 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00042 9.1E-09 66.7 14.2 159 220-384 3-180 (654)
264 PF05631 DUF791: Protein of un 97.8 0.00097 2.1E-08 58.0 14.8 144 233-382 62-212 (354)
265 KOG2816 Predicted transporter 97.7 0.00091 2E-08 61.5 13.3 121 249-379 72-192 (463)
266 PF07672 MFS_Mycoplasma: Mycop 97.7 0.0011 2.3E-08 54.7 11.9 55 76-130 2-61 (267)
267 KOG3880 Predicted small molecu 97.6 0.00046 9.9E-09 58.0 8.9 120 9-133 80-201 (409)
268 PF01770 Folate_carrier: Reduc 97.5 0.0081 1.8E-07 53.8 15.6 152 225-383 24-179 (412)
269 KOG2563 Permease of the major 97.4 0.0022 4.8E-08 57.2 11.0 121 230-357 70-199 (480)
270 PF12832 MFS_1_like: MFS_1 lik 97.4 0.0024 5.2E-08 42.5 8.5 59 210-269 6-65 (77)
271 PF05978 UNC-93: Ion channel r 97.3 0.017 3.7E-07 44.5 13.6 101 246-353 44-144 (156)
272 PF03092 BT1: BT1 family; Int 97.3 0.0035 7.7E-08 57.8 11.6 150 228-380 13-169 (433)
273 PF06963 FPN1: Ferroportin1 (F 97.0 0.083 1.8E-06 48.3 17.1 172 206-379 4-193 (432)
274 PF03137 OATP: Organic Anion T 96.9 0.00012 2.5E-09 69.0 -1.6 133 220-358 18-201 (539)
275 KOG0637 Sucrose transporter an 96.9 0.0076 1.7E-07 54.0 9.4 149 206-355 34-200 (498)
276 TIGR00769 AAA ADP/ATP carrier 96.7 0.093 2E-06 48.6 15.5 56 302-358 133-189 (472)
277 KOG1479 Nucleoside transporter 96.7 0.11 2.4E-06 46.5 15.1 61 295-357 341-401 (406)
278 COG0477 ProP Permeases of the 96.5 0.077 1.7E-06 46.2 13.3 133 223-360 21-158 (338)
279 PF01733 Nucleoside_tran: Nucl 96.4 0.00073 1.6E-08 59.2 -0.1 55 296-351 247-301 (309)
280 PF06779 DUF1228: Protein of u 96.2 0.059 1.3E-06 36.3 8.1 78 217-300 5-83 (85)
281 KOG2601 Iron transporter [Inor 96.1 0.024 5.2E-07 49.4 7.0 118 5-122 77-217 (503)
282 PRK03612 spermidine synthase; 95.8 0.71 1.5E-05 43.8 16.4 56 305-362 118-174 (521)
283 KOG3626 Organic anion transpor 95.6 0.054 1.2E-06 52.2 8.2 156 222-383 114-340 (735)
284 KOG1479 Nucleoside transporter 95.5 0.58 1.3E-05 42.0 13.3 36 299-335 119-154 (406)
285 PF03219 TLC: TLC ATP/ADP tran 95.4 0.83 1.8E-05 42.7 14.7 41 318-359 165-205 (491)
286 PF06779 DUF1228: Protein of u 95.3 0.017 3.7E-07 38.9 2.6 47 2-48 38-84 (85)
287 KOG3098 Uncharacterized conser 95.3 0.1 2.2E-06 47.8 8.3 99 3-102 291-410 (461)
288 PF00854 PTR2: POT family; In 95.1 0.11 2.5E-06 47.0 8.4 87 298-386 34-123 (372)
289 PF02487 CLN3: CLN3 protein; 94.9 0.84 1.8E-05 41.3 12.9 73 250-328 70-142 (402)
290 PRK03612 spermidine synthase; 94.9 0.12 2.6E-06 48.9 8.0 77 48-125 114-191 (521)
291 PF12832 MFS_1_like: MFS_1 lik 94.0 0.054 1.2E-06 36.0 2.7 28 4-31 48-75 (77)
292 PF13000 Acatn: Acetyl-coenzym 93.1 0.81 1.8E-05 42.2 9.2 37 317-354 138-174 (544)
293 KOG3097 Predicted membrane pro 91.1 10 0.00022 33.3 14.6 70 4-74 71-140 (390)
294 KOG3574 Acetyl-CoA transporter 90.8 2.9 6.4E-05 37.3 9.6 139 204-351 31-186 (510)
295 KOG1237 H+/oligopeptide sympor 89.1 14 0.00029 35.8 13.6 167 214-386 47-245 (571)
296 TIGR00939 2a57 Equilibrative N 88.5 10 0.00022 35.3 12.1 31 299-330 108-138 (437)
297 PF03547 Mem_trans: Membrane t 82.7 10 0.00022 34.5 9.3 19 250-268 6-24 (385)
298 KOG4332 Predicted sugar transp 81.3 0.95 2.1E-05 38.1 1.7 69 252-326 85-154 (454)
299 KOG3880 Predicted small molecu 80.8 3.8 8.2E-05 35.4 5.0 75 29-103 327-401 (409)
300 COG5336 Uncharacterized protei 80.4 4.9 0.00011 28.1 4.6 35 329-364 38-72 (116)
301 PF06912 DUF1275: Protein of u 79.6 9.3 0.0002 31.3 7.1 41 71-111 153-193 (209)
302 PF03547 Mem_trans: Membrane t 78.9 51 0.0011 30.0 16.3 20 195-214 236-255 (385)
303 PF02990 EMP70: Endomembrane p 76.5 49 0.0011 31.7 11.7 24 246-269 304-327 (521)
304 PF07857 DUF1632: CEO family ( 75.4 49 0.0011 28.0 10.3 21 215-235 189-209 (254)
305 KOG2881 Predicted membrane pro 70.1 66 0.0014 27.1 10.2 20 250-269 251-270 (294)
306 PF07672 MFS_Mycoplasma: Mycop 67.8 21 0.00044 30.3 6.2 88 3-93 153-252 (267)
307 COG3202 ATP/ADP translocase [E 67.0 1.1E+02 0.0025 28.7 24.0 75 307-382 294-369 (509)
308 PF00909 Ammonium_transp: Ammo 65.6 1.1E+02 0.0024 28.1 11.6 29 77-105 108-136 (399)
309 PF06679 DUF1180: Protein of u 65.5 9.6 0.00021 29.5 3.6 9 366-374 96-104 (163)
310 PRK13629 threonine/serine tran 62.6 1.3E+02 0.0029 28.0 17.4 47 73-124 17-63 (443)
311 PF11947 DUF3464: Protein of u 53.9 36 0.00077 26.1 4.8 32 313-344 110-141 (153)
312 COG5336 Uncharacterized protei 53.9 64 0.0014 22.9 5.5 19 251-269 54-72 (116)
313 COG2962 RarD Predicted permeas 50.6 1.7E+02 0.0036 25.4 10.7 67 196-269 61-127 (293)
314 PF05255 UPF0220: Uncharacteri 49.2 1.3E+02 0.0028 23.6 9.8 58 71-128 13-76 (166)
315 PF01733 Nucleoside_tran: Nucl 48.7 4.8 0.0001 35.4 -0.5 61 42-102 246-306 (309)
316 PF07857 DUF1632: CEO family ( 46.6 31 0.00068 29.2 4.0 8 353-360 94-101 (254)
317 PF11947 DUF3464: Protein of u 45.3 60 0.0013 24.9 4.9 79 13-95 56-145 (153)
318 KOG3810 Micronutrient transpor 45.3 32 0.0007 30.6 3.9 121 5-128 285-418 (433)
319 KOG4112 Signal peptidase subun 44.0 51 0.0011 22.5 3.8 16 346-362 35-50 (101)
320 PF10183 ESSS: ESSS subunit of 43.6 30 0.00065 24.6 3.0 31 104-134 54-84 (105)
321 PF03606 DcuC: C4-dicarboxylat 42.7 3E+02 0.0065 26.0 12.0 9 261-269 106-114 (465)
322 PF11151 DUF2929: Protein of u 42.1 83 0.0018 19.4 5.8 43 87-129 9-51 (57)
323 PF12805 FUSC-like: FUSC-like 40.1 1.3E+02 0.0028 26.1 7.0 38 24-61 2-40 (284)
324 PF02694 UPF0060: Uncharacteri 38.9 43 0.00093 23.7 3.0 39 4-42 67-105 (107)
325 PRK10263 DNA translocase FtsK; 38.1 3.5E+02 0.0077 29.3 10.3 22 247-268 60-81 (1355)
326 PRK02237 hypothetical protein; 35.4 56 0.0012 23.2 3.1 39 4-42 69-107 (109)
327 KOG3097 Predicted membrane pro 33.6 3.4E+02 0.0073 24.4 8.0 108 204-323 29-136 (390)
328 TIGR03644 marine_trans_1 proba 33.5 3.9E+02 0.0085 24.7 13.0 19 94-112 112-130 (404)
329 PF07760 DUF1616: Protein of u 33.3 2.8E+02 0.0061 24.1 7.9 56 47-103 22-77 (287)
330 KOG2601 Iron transporter [Inor 32.9 3.9E+02 0.0086 24.5 11.0 18 345-362 186-203 (503)
331 TIGR01666 YCCS hypothetical me 31.9 2E+02 0.0044 28.9 7.5 54 8-61 40-98 (704)
332 PRK10720 uracil transporter; P 31.2 3.4E+02 0.0073 25.4 8.5 19 119-137 393-411 (428)
333 TIGR01667 YCCS_YHJK integral m 30.9 2.1E+02 0.0046 28.7 7.5 53 9-61 41-98 (701)
334 KOG1277 Endosomal membrane pro 29.2 4.8E+02 0.01 24.4 11.7 20 250-269 338-357 (593)
335 TIGR02230 ATPase_gene1 F0F1-AT 28.8 2.1E+02 0.0046 20.2 6.4 36 83-118 46-85 (100)
336 TIGR00836 amt ammonium transpo 28.8 4.7E+02 0.01 24.2 11.2 18 94-111 105-122 (403)
337 COG1268 BioY Uncharacterized c 28.6 77 0.0017 25.3 3.3 19 2-20 93-111 (184)
338 PF10785 NADH-u_ox-rdase: NADH 27.7 77 0.0017 21.6 2.8 41 3-43 30-77 (86)
339 PF04226 Transgly_assoc: Trans 25.5 1.5E+02 0.0033 17.4 4.9 36 92-127 7-42 (48)
340 PF01864 DUF46: Putative integ 25.1 3.5E+02 0.0077 21.5 7.8 29 244-272 90-118 (175)
341 PF12273 RCR: Chitin synthesis 24.8 49 0.0011 24.6 1.6 19 110-128 1-19 (130)
342 PRK00293 dipZ thiol:disulfide 24.7 6.7E+02 0.015 24.6 19.1 24 86-109 212-235 (571)
343 PF03605 DcuA_DcuB: Anaerobic 24.5 1.4E+02 0.0029 26.9 4.4 11 262-272 72-82 (364)
344 PF13386 DsbD_2: Cytochrome C 24.4 3.8E+02 0.0083 21.6 14.1 29 241-269 152-180 (199)
345 PF05297 Herpes_LMP1: Herpesvi 24.2 26 0.00055 29.7 0.0 15 255-269 121-135 (381)
346 COG2836 Uncharacterized conser 23.8 4.3E+02 0.0093 22.0 13.7 27 242-268 167-193 (232)
347 PF15048 OSTbeta: Organic solu 23.8 92 0.002 22.8 2.7 19 364-382 35-53 (125)
348 PLN02332 membrane bound O-acyl 23.5 6.4E+02 0.014 23.9 10.2 33 19-51 339-371 (465)
349 PF02632 BioY: BioY family; I 23.4 1.2E+02 0.0025 23.3 3.4 21 2-22 64-84 (148)
350 PF06645 SPC12: Microsomal sig 23.4 2.3E+02 0.005 18.7 5.9 51 81-137 9-59 (76)
351 PF14851 FAM176: FAM176 family 22.7 2.6E+02 0.0055 21.6 5.0 7 354-360 12-18 (153)
352 PRK10712 PTS system fructose-s 22.6 7.3E+02 0.016 24.3 9.2 19 250-268 317-335 (563)
353 PF11511 RhodobacterPufX: Intr 22.3 2.2E+02 0.0049 18.2 4.3 30 108-137 29-58 (67)
354 PF11298 DUF3099: Protein of u 22.0 1.6E+02 0.0034 19.4 3.3 61 13-77 9-69 (73)
355 PF03741 TerC: Integral membra 21.7 4.2E+02 0.0092 21.2 13.6 54 64-119 16-69 (183)
356 PF13073 DUF3937: Protein of u 21.4 2.2E+02 0.0048 17.8 3.7 38 201-238 2-39 (73)
357 PF04123 DUF373: Domain of unk 21.0 6.2E+02 0.013 22.8 11.5 39 243-281 263-301 (344)
358 TIGR01666 YCCS hypothetical me 21.0 8.8E+02 0.019 24.6 10.1 52 260-311 44-95 (704)
359 COG2056 Predicted permease [Ge 20.6 6.5E+02 0.014 22.9 11.0 20 366-385 192-211 (444)
360 PF11833 DUF3353: Protein of u 20.1 4.2E+02 0.0091 21.5 6.1 31 75-105 136-166 (194)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=268.83 Aligned_cols=352 Identities=16% Similarity=0.161 Sum_probs=278.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+.|.++-.+.|.++||.+.|+.+..++++.++.+++++++++.+.+.++.+++|..+|..+|++...+..|++++|||+.
T Consensus 75 i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~ 154 (448)
T COG2271 75 ITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTW 154 (448)
T ss_pred HHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCce
Confidence 56888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHH--HHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.++++++.++|..+.|++. +.+..+.+||..|++.++++++++++.++..+++|+....++-++...+
T Consensus 155 ~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d---------- 224 (448)
T COG2271 155 WSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGD---------- 224 (448)
T ss_pred EEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcC----------
Confidence 9999999999999999999 8898888999999999999999999999888776655443332222100
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
..+...+++..+.- .....-.+.+++||.+|.+.++..+.+..-+++..|.|.|+.|..+++.
T Consensus 225 --------~~e~~~~~~~~~~l---------s~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~ 287 (448)
T COG2271 225 --------PLEIYEEEKENEGL---------TAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL 287 (448)
T ss_pred --------chhhhhhhccCCCc---------cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence 00000000000000 0001235678999999999999999999999999999999999999997
Q ss_pred hhHHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHHhcccc
Q 014646 240 ADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 240 ~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 316 (421)
..+.. .++.-+++++|++++|+++||+-+.++. ...+++.+...++.+.....+ +.+...+++.+.|+...+...
T Consensus 288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqm 365 (448)
T COG2271 288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQM 365 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHH
Confidence 66643 4777899999999999999998533221 333344444444444444444 346667777778887777776
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.......|..|++..|++.|+...+.+.+|...+....|++.|.+| |...|++..+..+++.++++
T Consensus 366 LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 366 LIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHH
Confidence 6777788999999999999999888888798999989999999865 87888877777666665554
No 2
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.2e-35 Score=276.96 Aligned_cols=335 Identities=11% Similarity=0.040 Sum_probs=222.9
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHH--------HHHHHHHhhhhhhhhcccccccccccC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.+++++.|+++||+|||+++.+++++++++++++++++|+++ ++++|+++|++.|..++...+++.|++
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~ 147 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS 147 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC
Confidence 567899999999999999999999999999999999999999875 789999999999999999999999999
Q ss_pred CCCCchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccccc
Q 014646 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
|+++|+++.++...+..+|..+++.+...+. ..+|||++|++.+++.++ .++.....||++++....++.+
T Consensus 148 p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~ 226 (490)
T PRK10642 148 PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLE 226 (490)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh
Confidence 9999999999999988888888887665443 257999999997765543 3333444566544311000000
Q ss_pred chhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhch-hh-HHHHHHHHHHHHHHHHHH
Q 014646 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE-KV-YVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~~~~~~~~~ 223 (421)
.. +. +.. .+++ ..++++++++ +. ........++....++.+
T Consensus 227 ~~------------~~-----~~~-------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (490)
T PRK10642 227 QG------------DR-----EGL-------QDGP-------------KVSFKEIATKHWRSLLTCIGLVIATNVTYYML 269 (490)
T ss_pred hh------------cc-----ccc-------cccc-------------cCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 000 0000 0122333332 22 222222234455667788
Q ss_pred HHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHH-HH--HHHHhhchhHH
Q 014646 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SC--LTAFCLSSLYG 299 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 299 (421)
..|.|.|+++..+.+.... .......++.+++.++.|+++||+||| +.+........+ .. +.....++...
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 8899999988777765433 333555677888899999999999998 555444332221 11 11122223333
Q ss_pred HHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
..+...+.+++.+...+....+..+.+|++.|+++.|+.+..... ++.++|.+.+++.+..+++...+++.....+++.
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 344444445554555555667778889999999999986555555 4567899999998866544444444443333333
Q ss_pred H
Q 014646 380 G 380 (421)
Q Consensus 380 ~ 380 (421)
+
T Consensus 424 ~ 424 (490)
T PRK10642 424 I 424 (490)
T ss_pred H
Confidence 3
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-35 Score=254.63 Aligned_cols=324 Identities=19% Similarity=0.221 Sum_probs=260.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++|+...+.||+.||++++..+.++.++.+++++++||+.++++|++.|+..|.+++...++..+..|+++|+++
T Consensus 59 l~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~A 138 (394)
T COG2814 59 LGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRA 138 (394)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..++.++|.+++.++.+.+|||..|++.+.++++..+..+..+| ++. .+++.+..
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~-------------- 200 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE--ISGSLPGP-------------- 200 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcc--------------
Confidence 999999999999999999999999999999999999999999888888888 111 11111100
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++..+++|+|.++...+..++...+.+...+|+..++++..+.+...
T Consensus 201 --------------------------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~ 248 (394)
T COG2814 201 --------------------------------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA 248 (394)
T ss_pred --------------------------------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH
Confidence 122446789999999999889998999999999999999999988755
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHH-HHHHHhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .....+++++++|+.++|++.|| +.+ +.+.....+.... ..+.....+.+...+...+.++..........
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 5 44577889999999999999999 655 5555554444443 33444444555555555555444444433333
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhh
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
....+ .-|+.+..+.+++....|. |..+|..++|.+.|+.| +....++.+...+++..+.+.
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNL-GIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALL 384 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHH
Confidence 34444 4468899999999888887 99999999999999955 777777777776666665553
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.4e-35 Score=269.96 Aligned_cols=350 Identities=14% Similarity=0.132 Sum_probs=241.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|+++
T Consensus 69 ~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~ 148 (434)
T PRK11663 69 ITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGW 148 (434)
T ss_pred HHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+.++|.++++.+++.+.+.+|||+.|++.+++.++..+...+..||++++...++..++.. +
T Consensus 149 ~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------~ 216 (434)
T PRK11663 149 WAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH------------D 216 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc------------c
Confidence 9999999999999999999999999999999999988777666555555565443211111100000 0
Q ss_pred Cccccccchhhhhhhhhcccccchhhhhhhhhhhhh-HhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT-KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
. .+ ..++.+ ++. .+.+ +.+ +..++++.++...+..++.......+..|+|.|+.+..+.+..
T Consensus 217 --~-~~---~~~~~~-~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 279 (434)
T PRK11663 217 --A-LE---LAQQQE-GAG-------LSRK---EILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLV 279 (434)
T ss_pred --c-cc---cchhcc-ccC-------CChh---hhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHH
Confidence 0 00 000000 000 0000 111 1356788888887777777777778888999999887788765
Q ss_pred hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.. .......++++++.++.|++.||+.++.++................+......+...........+++.........
T Consensus 280 ~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 359 (434)
T PRK11663 280 TANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIG 359 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44 44566778899999999999999843321111111111111111111111122222222222222222221122234
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
....+..|++.|++++|+.+...+. |..++|.+.|++.|..| +...+...+++.+++.+..
T Consensus 360 ~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 360 MAAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 4567778889999999999877776 88999999999999877 8788877777766655444
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.1e-34 Score=263.68 Aligned_cols=322 Identities=16% Similarity=0.095 Sum_probs=242.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++..++++.+++++|++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 55 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 134 (390)
T PRK03545 55 WVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQA 134 (390)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhH
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
++++..+.++|..++|++++.+.+++|||+.|++.+++.++..+..+...|+.++ +++..
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~------~~~~~-------------- 194 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS------EHSGS-------------- 194 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC------CCcch--------------
Confidence 9999999999999999999999999999999999998877766665555454211 00000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++.++++++|.++......++..........+.+.++++..+.++..
T Consensus 195 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 242 (390)
T PRK03545 195 --------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF 242 (390)
T ss_pred --------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 012446678888776655555555555556677888888877777544
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++++++.++.+++.||.++| ...............+....++.+...+...+.+++.....+....
T Consensus 243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 317 (390)
T PRK03545 243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQV 317 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHH
Confidence 4 344566778899999999999999876 4443333333333333333444455555555556655544455556
Q ss_pred hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+.+.. ++.+++++|+.+...+. |..+||.+.|.+.|..| ++..+...+.+.+++.....
T Consensus 318 ~~~~~~-~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 318 KVLKLA-PDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHHhC-CCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHH
Confidence 666655 46889999999766665 88899999999999877 76777777766655555543
No 6
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.1e-34 Score=266.64 Aligned_cols=325 Identities=14% Similarity=0.104 Sum_probs=220.3
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhH--------HHHHHHHHhhhhhhhhcccccccccccCC
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
+..++++++|+++||+|||+++..++++++++++++++++++. .++++|+++|++.|..++...+++.|++|
T Consensus 75 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p 154 (432)
T PRK10406 75 MRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV 154 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC
Confidence 4458999999999999999999999999999999999999874 58899999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccc
Q 014646 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 146 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 146 (421)
+++|+++.++.+.+...|.++++.+...+. +.+|||++|++.++++++... .....||++++ ++ +
T Consensus 155 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~-~- 227 (432)
T PRK10406 155 EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----ET-R- 227 (432)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----HH-h-
Confidence 999999999999998888888887765543 257999999998776654322 22222432111 00 0
Q ss_pred hhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHH-HHHHHHHHH
Q 014646 147 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY-NFVIGAYSY 225 (421)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (421)
. . .+ ..++++++++++.+...+...+. ...++.+..
T Consensus 228 ~----------------------------~-~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
T PRK10406 228 A----------------------------L-KE--------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTT 264 (432)
T ss_pred h----------------------------h-cc--------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 01345666777777665554443 566778889
Q ss_pred HhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH-HH--Hh-hchhHHH
Q 014646 226 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA--FC-LSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~ 300 (421)
|+|.|+++..+.+..+. ....+......++.++.|+++||++|| +.+.....+..+... .. .. .++....
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999988777775444 334555666677888889999999988 544433332222211 11 11 1222222
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
.....+..++.+...+....+..|.+|++.|+++.|+.+...+.+.+...|.+.+.+ +..|.+...+++.+...+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHH
Confidence 222222223333333445677889999999999999998766654344477777744 5556565555555555444444
Q ss_pred Hhh
Q 014646 381 IWF 383 (421)
Q Consensus 381 ~~~ 383 (421)
..+
T Consensus 419 ~~~ 421 (432)
T PRK10406 419 VSL 421 (432)
T ss_pred HHH
Confidence 433
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.5e-35 Score=267.70 Aligned_cols=347 Identities=16% Similarity=0.195 Sum_probs=238.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||+++..++++++++++++++++|++.+++.|+++|++.+...|....++.|++|+++|+++
T Consensus 54 ~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~ 133 (412)
T TIGR02332 54 AAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARA 133 (412)
T ss_pred HHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhc------ccchhHHHHHhHHHHHHHHHHHHhcccccccccCC-cccccchhhhcccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGS------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP-AESGKAQVVASVSE 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~ 154 (421)
+++++.+.++|.++++.+++++.+ ..|||+.|++.++++++..++.+++.||++++... .+++++... +
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~----~ 209 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALK----E 209 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHH----H
Confidence 999999999999999999988763 46999999999998887777777777776532110 000000000 0
Q ss_pred cccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Q 014646 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
..+.... +.++ ..... .+.. ......+++++ +|.++...+.+++.....+.+.+|+|.++++.
T Consensus 210 ~~~~~~~--~~~~----~~~~~-~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 272 (412)
T TIGR02332 210 MIDNDQL--TLEQ----PEGAF-AHAA---------MPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF 272 (412)
T ss_pred HHHhccc--cccc----ccccc-cccc---------ccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000000 0000 00000 0000 00011234444 47778777777888888888999999999873
Q ss_pred -hccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHh
Q 014646 235 -YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 312 (421)
Q Consensus 235 -~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (421)
.+.+.... .+.....++.+++.++.|+++||+++|+ ...............+....++.........+..++..
T Consensus 273 ~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 348 (412)
T TIGR02332 273 NQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSF 348 (412)
T ss_pred CCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 34554333 4457778889999999999999998762 22222222222222222222222222222222222222
Q ss_pred ccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 313 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
...+.......+.+|++.|+++.|+.+...+. |++++|.+.|.+.|..|+|...+.++++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 349 SAMAIFWTTPDQSISLQARAIAIAVINATGNI-GSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhHHHhhcccccchHHHHHHHHHHHHhhhh-hhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 22222233334567889999999999877776 99999999999999988888877766554
No 8
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3e-35 Score=272.98 Aligned_cols=348 Identities=16% Similarity=0.110 Sum_probs=243.3
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcc-----cchhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++++++++.|+++||+|||+++..+.++++++.+..++ +++++.+++.|+++|++.+...|...+++.||+|++
T Consensus 75 ~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 154 (467)
T PRK09556 75 ITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR 154 (467)
T ss_pred HHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc
Confidence 578899999999999999999998888888777766554 689999999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhccc---chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
+|+++++++..+.++|.++++++..++.+.. +||..|.+.+++.++.+++.+++.++.+++....++++ .
T Consensus 155 ~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~------~- 227 (467)
T PRK09556 155 KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE------I- 227 (467)
T ss_pred ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh------c-
Confidence 9999999999999999999999887766543 69999999888888777776666555332211100000 0
Q ss_pred ccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhh-hHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 014646 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
.++ ...++.. +.++++ . . ..+. .+..+++|.+|...+..++......+...|+|.|++
T Consensus 228 --~~~---------~~~~~~~-~~~~~~--~----~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~ 286 (467)
T PRK09556 228 --FGE---------PISEEDK-ETESTD--M----T---KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAF 286 (467)
T ss_pred --ccC---------ccchhhh-cccccc--C----c---HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000 000000 0 0 0011 234678999999888888888888888999999999
Q ss_pred HhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHH--HHHHHhhchhHHHHHHHHHHHH
Q 014646 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS--CLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
+.++.+..+. .......++.+++.++.|+++||+++| +............ .+.....++.+...+..++.++
T Consensus 287 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 287 QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-----RALVACIALALIIFTLGVYQHATSEYMYLASLFALGF 361 (467)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----chHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 9888886554 444667788999999999999999987 3333222221111 1122222333333333344443
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh------------hhhchhhhhhHHHHHHHH
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~ 377 (421)
+.............|.+|++.++++.|+.|...+..|..++|.+.|++.| ..+ |...|.+..++.++
T Consensus 362 ~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~ 440 (467)
T PRK09556 362 LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAIG 440 (467)
T ss_pred HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHHHHHHHHH
Confidence 33222222335666889999999999999888786577889999999999 334 88888877766666
Q ss_pred HHHHhh
Q 014646 378 AAGIWF 383 (421)
Q Consensus 378 ~~~~~~ 383 (421)
+.+..+
T Consensus 441 ~~~~~~ 446 (467)
T PRK09556 441 CICLMA 446 (467)
T ss_pred HHHHHH
Confidence 655544
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.2e-35 Score=276.26 Aligned_cols=371 Identities=15% Similarity=0.137 Sum_probs=255.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|++++++++|+++||+|||++++++++++++++++++++++++.++++|++.|++.++..+...+++.|++|+++|++.
T Consensus 213 lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~ 292 (742)
T TIGR01299 213 LGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEH 292 (742)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcc-------------cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchh
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSH-------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 148 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~-------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (421)
+++...+..+|.++++.++..+... .+||+.+++.+++.++. ++.+++.||++++.....+. ..
T Consensus 293 ~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~--~e 369 (742)
T TIGR01299 293 LSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKH--DE 369 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCH--HH
Confidence 9999999999999999887666542 36999999888776554 44455669998874322221 11
Q ss_pred hhcccccccccCCCcc--ccc-----cchhhhhhh-----hhcccc-----cchhhhhhhhhhhhhHhhhchhh---HHH
Q 014646 149 VASVSEGSEASNLNDH--VSE-----DISDQASER-----SIKSIG-----ESRFLNQLSQFSQDTKVLLQEKV---YVV 208 (421)
Q Consensus 149 ~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~---~~~ 208 (421)
.....+++...+.... ..+ ..+.....+ .+.... ..+........+.+++.+++.+. .+.
T Consensus 370 A~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~ 449 (742)
T TIGR01299 370 AWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK 449 (742)
T ss_pred HHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH
Confidence 1111111111111000 000 000000000 000000 00000111223334555665543 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHh----h-------------------------------------cc----------
Q 014646 209 NVLGYIAYNFVIGAYSYWGPKAGYNI----Y-------------------------------------HM---------- 237 (421)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------------------------~~---------- 237 (421)
+.+.+++..+.++++..|+|.++++. + +.
T Consensus 450 l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (742)
T TIGR01299 450 LMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDS 529 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccc
Confidence 55557778888999999999875441 0 00
Q ss_pred ------------------------------------------------------------c----hhhHHHHhhHhHHHH
Q 014646 238 ------------------------------------------------------------S----NADMMFGGVTIVCGI 253 (421)
Q Consensus 238 ------------------------------------------------------------~----~~~~~~~~~~~~~~~ 253 (421)
+ ........+..++.+
T Consensus 530 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i 609 (742)
T TIGR01299 530 LFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVL 609 (742)
T ss_pred cccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHH
Confidence 0 000122345567889
Q ss_pred HHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHH
Q 014646 254 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 333 (421)
Q Consensus 254 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (421)
++.+++++++||+||| +++..+.++.++++++....++....+++.++.+++.+..++....++.|.+|++.|++
T Consensus 610 ~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgt 684 (742)
T TIGR01299 610 PGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRAT 684 (742)
T ss_pred HHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 9999999999999998 77777777777766666555555555555566677777777888899999999999999
Q ss_pred HHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 334 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 334 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++|+.+...+. |.+++|++.+.+.+.. ...++++.+++.++++++.+
T Consensus 685 a~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 685 AFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence 99999766666 9999999999887752 34566666665555544443
No 10
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.1e-34 Score=258.74 Aligned_cols=325 Identities=12% Similarity=0.018 Sum_probs=230.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|+++++++.|+++||+|||+++..+......+......++|++.+++.|+++|++.+. .+.....++|++|+++|+++
T Consensus 37 ~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a 115 (368)
T TIGR00903 37 AAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLV 115 (368)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHH
Confidence 57889999999999999999987766555555443333447999999999999999986 45566667999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|.++++++++.+.+++|||+.|++.++++++..++.++..||++++.+ +..
T Consensus 116 ~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~-----~~~-------------- 176 (368)
T TIGR00903 116 ISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA-----EGF-------------- 176 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-----CCc--------------
Confidence 9999999999999999999999999999999999999888887777777787543210 000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+ .+ +..+++++++++|.+|...+..++....++++.+|+|.|+++ .+.+...
T Consensus 177 -----~---~~-------------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~~ 228 (368)
T TIGR00903 177 -----G---FK-------------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDIA 228 (368)
T ss_pred -----c---hH-------------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHH
Confidence 0 00 001235678899999999999999999999999999999976 4566433
Q ss_pred HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhh
Q 014646 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 321 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (421)
.....+..+ .+.+..++++||..|+..+. ...........+.+.......+........++.+++.....+..+.+
T Consensus 229 ~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (368)
T TIGR00903 229 GDAVALAIL---AGLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW 304 (368)
T ss_pred HHHHHHHHH---HHHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 333333334 34444688999987653221 21221222223323222223333333444555555565666667788
Q ss_pred hhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 322 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+|.+|++.|+++.|+.+...+. +++.+|.+.+.+.. + ....|.+.+...+++.+..
T Consensus 305 ~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 305 IGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877777 77788888887774 2 4456666665555554443
No 11
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=260.01 Aligned_cols=326 Identities=37% Similarity=0.594 Sum_probs=251.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+.+.+++|+.|+++|||+||+++.+|..+|.++.++++++..||++.++|.+.|+|++.+.|.++++++|.+|.++|+++
T Consensus 79 v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~ 158 (493)
T KOG1330|consen 79 VVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRV 158 (493)
T ss_pred HHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccc-hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++++.+..+|..+|.+.+..+.+..+ |||.|+..++++++.+++.+++.+|.++.. .++.+....
T Consensus 159 ~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga--~~~~~~~~~----------- 225 (493)
T KOG1330|consen 159 LGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA--RDEVDGENK----------- 225 (493)
T ss_pred HHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccc--ccccccCCc-----------
Confidence 999999999999999999999987766 999999999999999999999887644321 111100000
Q ss_pred CCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh---cc
Q 014646 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY---HM 237 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 237 (421)
. .......+++.+.+.+++.+....+.+....+....+..|.|.+....+ +.
T Consensus 226 --------------~-----------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~ 280 (493)
T KOG1330|consen 226 --------------M-----------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGF 280 (493)
T ss_pred --------------C-----------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCC
Confidence 0 0112233566777888888888888888888888888888888665443 22
Q ss_pred c-hhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHH-----HHHHH-HHHHHHHHHHh--hchhHHHHHHHHHHH
Q 014646 238 S-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL-----SAATF-LGAISCLTAFC--LSSLYGFLALFTVGE 308 (421)
Q Consensus 238 ~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 308 (421)
+ .....+..+...++.+|.+++|.++||+.++.++..... ..... .++..+.+... ..+.+..++++.+.-
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~ 360 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGE 360 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 2 244567788889999999999999999766544321111 11111 11111111111 123344444444444
Q ss_pred HHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchh
Q 014646 309 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 365 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 365 (421)
......+.+...+..+.+|++.|.++.++...+...+|.+.+|.+.|.+.|+.-+++
T Consensus 361 ~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 361 TISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 555567777888899999999999999999999999999999999999999876665
No 12
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=4.5e-34 Score=262.50 Aligned_cols=333 Identities=12% Similarity=0.072 Sum_probs=228.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhH--------HHHHHHHHhhhhhhhhcccccccccccC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++..+++++.|+++||+|||+++..+.+++++++++++++++++ .++++|+++|++.|..++....++.|++
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 34568889999999999999999999999999999999999987 5888999999999999999999999999
Q ss_pred CCCCchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccccc
Q 014646 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
|+++|++..+..+.+..+|.+++..+...+. +.+|||++|++.+++.++. +......||++++.+.+++.+
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~ 233 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQA 233 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcc
Confidence 9999999999999999999999887776654 2579999999887764332 222222244322100000000
Q ss_pred chhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHH-HHHHHHHHHHHHH
Q 014646 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYS 224 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 224 (421)
. . +++ ....+.++++|+.+.... ..++.....+...
T Consensus 234 ~-----------------------------~-~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (438)
T PRK09952 234 A-----------------------------A-KKR-------------IPVIEALLRHPGAFLKIIALRLCELLTMYIVT 270 (438)
T ss_pred c-----------------------------c-ccc-------------CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000 001122445555555443 3445556677778
Q ss_pred HHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH---hhc-hhHH
Q 014646 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLS-SLYG 299 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~ 299 (421)
.|.|.|.++..+.+.... ....+..+..+++.++.|+++||++|| +.+....++..+...... ... +.+.
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWI 345 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHH
Confidence 899999988887775433 233445566778888999999999998 555444433333222111 112 2223
Q ss_pred HHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh-hchhhhhhHHHHHHHHH
Q 014646 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLA 378 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 378 (421)
.....++.+++.+...+..+.+..|.+|++.|+++.++.+...+.+++.++|.+.+++.|.. ++|...+.+...+.+++
T Consensus 346 ~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~ 425 (438)
T PRK09952 346 VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLIS 425 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 33334444555555666678888999999999999999766656558888999999998865 34666666666665555
Q ss_pred HHHhh
Q 014646 379 AGIWF 383 (421)
Q Consensus 379 ~~~~~ 383 (421)
.+..+
T Consensus 426 ~v~~~ 430 (438)
T PRK09952 426 AMTAL 430 (438)
T ss_pred HHHHH
Confidence 55444
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=5.9e-34 Score=260.43 Aligned_cols=352 Identities=18% Similarity=0.207 Sum_probs=252.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 40 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 119 (399)
T TIGR00893 40 WGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATA 119 (399)
T ss_pred HHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHH
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|.++++.+++.+.+..+||+.|++.+++.++..++.++..||.+++....++++ + ....++
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~------ 190 (399)
T TIGR00893 120 VSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEE-K--YIVVGG------ 190 (399)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHH-H--hhcchh------
Confidence 9999999999999999999999998999999999998887777766666565432211000000 0 000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
...+.+.+ +++ +......++.+++|.++...+..++.......+..+.|.|+++..+.++..
T Consensus 191 -------~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (399)
T TIGR00893 191 -------LLAEQQGK-GPS----------TPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE 252 (399)
T ss_pred -------hccccccc-ccc----------CCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence 00000000 000 001124566778899998888888888888889999999999888877544
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh---hchhHHHHHHHHHHHHHHhccccc
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
. .......++.+++.++.+++.||++||+..................+.... .++.+.......+..++. ...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 331 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL-GAGAI 331 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch-hhhhH
Confidence 4 445667788899999999999999988421101111111111111111111 122333332333333333 35677
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
...+..+.+|+++|+++.|+.+...+. |..++|.+.|.+.|..|++...+.+.+.+.+++.+..
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 332 GWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999777665 8899999999999987767777777766655554443
No 14
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=5.5e-34 Score=266.74 Aligned_cols=370 Identities=15% Similarity=0.129 Sum_probs=229.5
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+|++++++++|+++||+|||+++.++.+++.+++++++++++ ++.++++|+++|++.|...+....++.|++|+
T Consensus 67 ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~ 146 (502)
T TIGR00887 67 IGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK 146 (502)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh
Confidence 578899999999999999999999999999999999888876 78999999999999999999999999999999
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhc-----------------------ccchhHHHHHhHHHHHHHHHHHHhccc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKP 132 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~p 132 (421)
++|++++++.+....+|.++++.++..+.. .++||++|.+.++++++..+. .++.|
T Consensus 147 ~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lp 225 (502)
T TIGR00887 147 KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIP 225 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence 999999999999999999999988765531 247999998888777654443 45569
Q ss_pred ccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhc----hhh---
Q 014646 133 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ----EKV--- 205 (421)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~--- 205 (421)
|++++...+++.++... +...+.++.+.+++ .++.++.+++ ++.. ..+++++++ ++.
T Consensus 226 ESpr~l~~~~~~~~~a~-~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~-----------~~~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 226 ETPRYTADVAKDVEQAA-SDMSAVLQVKIEAE-PDEVEKASTA---VEVP-----------KASWSDFFTHFFKWRHGKH 289 (502)
T ss_pred CCHHHHHHhCcchHHHH-HHHHHHhccccccC-cccccchhcc---ccch-----------hhhHHHHHHHHhhhHHHHH
Confidence 99887432222111000 00011100000000 0000000000 0000 011233332 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh-------------HHHHhhHhHHHHHHHhHHHHHHHhhcccccc
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISN 272 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 272 (421)
.......++.....+++...|.|.++++. |.+... .....+..++.+++.+++++++||+|||
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR--- 365 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSAI-GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK--- 365 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHHH-cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch---
Confidence 12222233444455666777888888654 443211 0122334456677888999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHh-hc--hhHHHHHHHHHHHHH-HhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccC
Q 014646 273 AFKLLSAATFLGAISCLTAFC-LS--SLYGFLALFTVGELL-VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 348 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ 348 (421)
+.+.....+..+++..... .. +.........+..++ .....+..+.+..|.+|++.|+++.|+.+...+. +++
T Consensus 366 --~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~ 442 (502)
T TIGR00887 366 --PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAI 442 (502)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHH
Confidence 6655554444433322221 11 111112222222222 2233445566778999999999999999877776 889
Q ss_pred CchhHHHHhhhhhh---------chhhhhhHHHHHHHHHHHHhhhheeeec-cccccccc
Q 014646 349 PSSPLVGVLQDHVN---------NWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDG 398 (421)
Q Consensus 349 ~~~~~~g~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 398 (421)
++|.+.+.+.|..+ ++...+.+++++.+++.+..+ ++|| ++++.||.
T Consensus 443 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~---~lpEt~~~~leei 499 (502)
T TIGR00887 443 IGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL---LIPETKGKSLEEL 499 (502)
T ss_pred HHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHhe---EeccCCCCCHHhh
Confidence 99999999988431 123455666555554443332 4455 55554443
No 15
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.8e-33 Score=259.92 Aligned_cols=353 Identities=13% Similarity=0.077 Sum_probs=234.5
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc----hhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
+++++++++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++
T Consensus 74 i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~ 153 (452)
T PRK11273 74 IAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE 153 (452)
T ss_pred HHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH
Confidence 56788999999999999999999999999999999888763 78888999999999999888888888999999999
Q ss_pred chhHHHHHHhHHHHHhH-HHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 78 KTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.||+++....+++++..
T Consensus 154 r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------- 224 (452)
T PRK11273 154 RGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--------- 224 (452)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh---------
Confidence 99999999999999874 45655444434458999999999888777777666667654321111100000
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
++.. ++.+.+..++ .+.++. -.+.+++++.+|...+..++.+...+....|+|.|+++..+
T Consensus 225 -~~~~---------~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g 285 (452)
T PRK11273 225 -NDYP---------DDYNEKHEQE-------LTAKQI--FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKH 285 (452)
T ss_pred -hccc---------cccccccCCC-------ccHHHH--HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0000 0000000000 000010 02346788999988888878777778888999999998877
Q ss_pred cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHHhc
Q 014646 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 313 (421)
.+.... ....+..++.+++.++.|+++||++++++. ........+..+....... ..+.+...+.....+.....
T Consensus 286 ~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 363 (452)
T PRK11273 286 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG 363 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh
Confidence 775444 334566678888999999999999543211 1111111211121111111 12222222223333333222
Q ss_pred cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhh
Q 014646 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
..........+.+|++.|++++|+.+...+..+...+|.+.|++.|+.| |...|..++...+++++....+
T Consensus 364 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 364 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHH
Confidence 2222344567889999999999999777666334557999999999987 7788887777666665555433
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.4e-33 Score=256.64 Aligned_cols=329 Identities=17% Similarity=0.168 Sum_probs=237.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++..++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 61 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 140 (406)
T PRK11551 61 LGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTA 140 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++.....||++++..++++.+..
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------- 206 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------- 206 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh--------------
Confidence 999999999999999999999888899999999988776666665665567643321100000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+ .. .+...+..+.+..+......++.....+....|.|.++++ .+.++..
T Consensus 207 -----~--------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~ 256 (406)
T PRK11551 207 -----A--------------------PV----LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQ 256 (406)
T ss_pred -----h--------------------hh----HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhh
Confidence 0 00 0000000011222233333344444556677789999887 4555433
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.|++.||+++| +.+...........+.....++.+...+...+.+++.....+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 331 (406)
T PRK11551 257 AGLVQIAFNIGGALGSLLIGALMDRLRPR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYA 331 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3 444666788899999999999999987 5555444444444343344445444444555566666566677788
Q ss_pred hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
+..+.+|+++|+++.|+.+...+. |..++|.+.|.+.++.+++...+.....+.+.+..
T Consensus 332 ~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 332 LAPLFYPTQVRGTGVGAAVAVGRL-GSMAGPLLAGQLLALGRSTVGVIGASIPVILVAAL 390 (406)
T ss_pred HHHHHcchhhhhhhhhHHHHhhhH-HHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHH
Confidence 889999999999999999777666 88999999999999866665555544444444333
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.4e-33 Score=252.07 Aligned_cols=321 Identities=12% Similarity=-0.022 Sum_probs=234.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+..+++++.+.+++++|++.+++.|+++|++.+...+....++.|++| ++|+++
T Consensus 55 ~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~ 133 (393)
T PRK09705 55 VTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLV 133 (393)
T ss_pred HHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhH
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999997 779999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhccc-chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
++.+..+...|..+++.+++.+.++. +||+.+.+.++..++..+..+...++.+ +++++..
T Consensus 134 ~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~------------- 195 (393)
T PRK09705 134 MGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREV-----ASSHKTT------------- 195 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC-----ccccCCC-------------
Confidence 99999999999999999999988875 8999988776654433322222111100 0000000
Q ss_pred CCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh
Q 014646 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
...++.++++..+...+..++....+.....|.|.++++ .+.+..
T Consensus 196 ----------------------------------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~ 240 (393)
T PRK09705 196 ----------------------------------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQ 240 (393)
T ss_pred ----------------------------------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence 001123356666666666666777778888999999987 577654
Q ss_pred hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.. ....+..++.+++.++.+++.||.++| +.......+...........++.... ....+.+++.+...+...
T Consensus 241 ~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~ 314 (393)
T PRK09705 241 YSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCL 314 (393)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHH
Confidence 44 445677888999999999999999987 55555544444433332222221111 122334555555555555
Q ss_pred hhhhcccC-cchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 320 YVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 320 ~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
....+..+ ++++++..|+.+...+. +..++|.+.|++.|..|++...+.+...+.+...+...
T Consensus 315 ~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 315 LLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 55666665 47899999999777666 77889999999999998887888877766655544433
No 18
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4e-33 Score=259.25 Aligned_cols=348 Identities=15% Similarity=0.150 Sum_probs=244.5
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc--chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCch
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|+
T Consensus 87 ~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~ 166 (465)
T TIGR00894 87 YGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERS 166 (465)
T ss_pred HHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHH
Confidence 5788999999999999999999999999999998887554 56888999999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHhHHHHHHHHHhhcc-cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccc
Q 014646 80 AWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+++++...+..+|.++++++++.+.+. .|||+.|++.++++++..++.+.+.||+++..+. ..+.. .
T Consensus 167 ~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~-~--------- 234 (465)
T TIGR00894 167 RLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC--ISKFE-K--------- 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC--CCHHH-H---------
Confidence 999999999999999999999999988 4999999999998887777776665554322110 00000 0
Q ss_pred cCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
+..++..+++.++. +...+++++++++.++...+..++.....+.+.+|+|.|+++..+.+
T Consensus 235 --------~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s 295 (465)
T TIGR00894 235 --------KYINSSLQGQKGST-----------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVS 295 (465)
T ss_pred --------HHHHhhcccccCCC-----------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 00000000000000 00124677889999999999889998899999999999999988888
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhh----HHHHHHHHH-HHHHHHHHh-hchhHHHHHHHHHHHHHH
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLG-AISCLTAFC-LSSLYGFLALFTVGELLV 311 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 311 (421)
.... ....++.++..++.++.|+++||+++|+...+. ......... ....+.... ..+....++.+.+.+++.
T Consensus 296 ~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 375 (465)
T TIGR00894 296 GKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVS 375 (465)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Confidence 6554 445677888999999999999998765322111 111111111 111111111 223333333444444444
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh--hchhhhhhHHHHHHHHHHHHh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 382 (421)
+...+.......+.. ++.+|.+.|+.+..... +..++|.+.|.+.|.. +.|...|.+.++..+++.++.
T Consensus 376 ~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 376 SGPLAGVLINSLDLA-PRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred hhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 444443333444444 56899999999877666 8888999999888753 446677777766665555443
No 19
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.8e-33 Score=261.70 Aligned_cols=353 Identities=14% Similarity=0.099 Sum_probs=235.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|+++++++.|+++||+|||++++++.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++
T Consensus 138 ~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~ 217 (505)
T TIGR00898 138 VGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIV 217 (505)
T ss_pred HHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.||++++...+++.++ ..+..++..+.+.
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~--a~~~l~~~~~~~~ 291 (505)
T TIGR00898 218 GTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEE--ALKILQRIAKING 291 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHH--HHHHHHHHHHHcC
Confidence 999999999999999999877654 9999999998877766655 556887765322211111 1010011111110
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.....+......+++..+++ ...++++++++|.++...+......+......+..+.+..+ .+.+ .
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~ 357 (505)
T TIGR00898 292 KKLPAEVLSLSLEKDLSSSK-----------KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGN--I 357 (505)
T ss_pred CCCCHHHHhhhhhhhhhhcc-----------CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCC--h
Confidence 00000000000000000000 01246678888887776655444333322222222222222 2222 1
Q ss_pred HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchh--HHHHHHHHHHHHHHhccccchh
Q 014646 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--YGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.....+..+..+++.++.+++.||+||| +.+....++.++.++.....++. +......++.+++....++..+
T Consensus 358 ~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (505)
T TIGR00898 358 YLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY 432 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223445677788999999999999998 66666666655555544443332 3344445555566666667778
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+..|.+|++.|++++|+.+...+. |++++|.+.+ +.+ .+ ...++.+.+...+++.++.+
T Consensus 433 ~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 433 LYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTL 492 (505)
T ss_pred HHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999766665 8899998888 443 23 33555555555555544443
No 20
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.5e-33 Score=260.00 Aligned_cols=351 Identities=14% Similarity=0.087 Sum_probs=242.9
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHH-HHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+..++.++.|+++||+|||++++.+.++..+++++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++
T Consensus 66 ~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a 144 (455)
T TIGR00892 66 VLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLA 144 (455)
T ss_pred HHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHH
Confidence 45677899999999999999999999999999999999999998875 5799999999777777788899996 679999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|..++|.+++.+.+.+|||+.|++.+++.++..+..++..|+.......+++.+. ..+....
T Consensus 145 ~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 216 (455)
T TIGR00892 145 NGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKE--------GLPPDGS 216 (455)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccc--------cCCCCCc
Confidence 99999999999999999999999999999999999988776655555544331110000000000 0000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++ .+.... . ++..+ ..++ +++++|.++......++..........++|.|.++ .+.++..
T Consensus 217 ----~~~----~~~~~~-~-------~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~ 277 (455)
T TIGR00892 217 ----TKK----LSKKST-A-------EKINR-FLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYE 277 (455)
T ss_pred ----ccc----ccccch-h-------hhhhh-hcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHH
Confidence 000 000000 0 00000 0112 46688888888877777777777778889999876 5666544
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. ...++..++.+++.++.+++.||...+.++ ...+..+........++....++.+.+.+...+.+++.+...+....
T Consensus 278 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~ 356 (455)
T TIGR00892 278 AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHV-QYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFE 356 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHH
Confidence 4 444667788888899999999974322111 12222222222222233333445555555666677777677777788
Q ss_pred hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+.+.+|+++++++.|+++...+. |.+++|.+.|.+.|..++|...++..+++.+++.+...
T Consensus 357 ~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 357 VLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 889999999999999999777666 99999999999999887788888887776665554433
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=8.4e-33 Score=249.83 Aligned_cols=313 Identities=17% Similarity=0.142 Sum_probs=240.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc-----hhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
++++++++++|+++||+|||++++.+.++..++.++..+++ +++.+++.|+++|++.+...+...+++.|++|++
T Consensus 45 ~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 124 (365)
T TIGR00900 45 LPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE 124 (365)
T ss_pred HHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 46678899999999999999999999999999988888887 9999999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
+|++++++.+.+..+|.+++|.+++.+.+..|||+.|++.++..++..+..+...++..+. +++++ .
T Consensus 125 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~--------- 191 (365)
T TIGR00900 125 QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA---SEIQA-L--------- 191 (365)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC---ccccc-c---------
Confidence 9999999999999999999999999999999999999998876655554444332211100 00000 0
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHH-HHhhhHHHHhh
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGPKAGYNIY 235 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 235 (421)
++ +..++..+.++.++++|.++...+..+.......... .+.|.+.++..
T Consensus 192 ---------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 192 ---------SN--------------------AVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred ---------ch--------------------hHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 00 0001112345667788888887777666666666665 78899888877
Q ss_pred ccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHhc
Q 014646 236 HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-LYGFLALFTVGELLVFA 313 (421)
Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (421)
+.++... .......++.+++.++.+++.||.+++ +.+..+..+...........++ .+...+..++.+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP 317 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 7775444 344666788889999999999999887 6555554444444444443443 55556666777777777
Q ss_pred cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
..+....+..+.+|+++|+++.|+.+...+. +..++|.+.|.+.|..|
T Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 7778888999999999999999999877776 88899999999998653
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=9.6e-33 Score=250.57 Aligned_cols=322 Identities=12% Similarity=0.025 Sum_probs=237.3
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.+...+.....+.|++| ++|+++
T Consensus 49 ~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 127 (377)
T TIGR00890 49 IGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLA 127 (377)
T ss_pred HHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHH
Confidence 5778999999999999999999999999999999999999999999999999999999888888888999987 469999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+..+++.|+.+++. +++..
T Consensus 128 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------- 189 (377)
T TIGR00890 128 SGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL----IKTNI-------------- 189 (377)
T ss_pred HHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc----cccCc--------------
Confidence 999999999999887777777777789999999999988887777666654322110 00000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.+ ++ ..+.++.++++.++...+..++..........+.+.|.++ .+.++..
T Consensus 190 ------~~~--------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (377)
T TIGR00890 190 ------EVS--------VK-------------DYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGF 241 (377)
T ss_pred ------ccc--------hh-------------hhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 000 00 0123456677877776666665555555555666666655 4555433
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch--hHHHHHHHHHHHHHHhccccch
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS--LYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
. .......+..+++.++.+++.||++|| +.+..+.....+..+.....++ .........+.+++.+...+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 3 445677788899999999999999988 6665555555554444433332 2222233444555555566666
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHH
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 377 (421)
..+..|.+|+++|+++.|+.+...+. |..++|.+.|.+.|..| |...+...+.+.++
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHH
Confidence 77888999999999999999766665 88999999999999876 77777766655444
No 23
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=5.5e-32 Score=248.91 Aligned_cols=306 Identities=14% Similarity=0.136 Sum_probs=207.1
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHH--------HHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
.+++++.|+++||+|||++++.+.+++.+++++++++++++. ++++|+++|++.+...+....++.|++|++
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 467889999999999999999999999999999999999874 688999999999999998899999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchh
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 148 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (421)
+|++++++...+.++|..+++.+++.+. +.+|||++|++..+.. +..++. ++.++ |+++...
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~----~~~~~~-~~~~~-----e~~~~~~ 219 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV----PFIFLI-RRSLE-----ETEEFLA 219 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH----HHHHHH-HHhcC-----CCHHHHH
Confidence 9999999999998888888888777653 4679999999754332 111111 11110 1000000
Q ss_pred hhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHH-HHHHHHHHHHHHHHHHHh
Q 014646 149 VASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (421)
. . ++. +.+ +.++...+++..+.. .+..++.....+....|.
T Consensus 220 ~-~--------------------------~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (434)
T PRK15075 220 R-K--------------------------HRP--------SMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYT 261 (434)
T ss_pred h-h--------------------------hcc--------ccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000 000 112223344443332 222334455667788899
Q ss_pred hhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH-H--HH-hhchhHHHHH
Q 014646 228 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-T--AF-CLSSLYGFLA 302 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~ 302 (421)
|.|+++..+.+..+. .......++++++.++.|+++||++|| +.............. . .. ..++......
T Consensus 262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 999998878876544 344566788889999999999999998 554443322222111 1 11 1122222222
Q ss_pred HHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 363 (421)
...+.+++.+...+....+..|.+|++.|+++.++.+...+.+++.++|.+.|++.|..|.
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 2333444455555555677889999999999999976666655567799999999998773
No 24
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.4e-32 Score=257.14 Aligned_cols=370 Identities=15% Similarity=0.110 Sum_probs=220.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc------------chhHHHHHHHHHhhhhhhhhcccccccc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFI 69 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i 69 (421)
+|++++++++|+++||+|||++++++.+++.++.+.++++ +.++.++++|+++|++.|...+...+++
T Consensus 66 ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i 145 (479)
T PRK10077 66 IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYI 145 (479)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHH
Confidence 6788999999999999999999999999999998887763 2356788999999999999999999999
Q ss_pred cccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCc
Q 014646 70 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 141 (421)
Q Consensus 70 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (421)
+|++|+++|++++++.+.+..+|.++++.++..+. +.+|||+.|++.+++.++..+. .++.||++++...+
T Consensus 146 ~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~ 224 (479)
T PRK10077 146 AEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSR 224 (479)
T ss_pred HhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHc
Confidence 99999999999999999999999999988776553 4569999999988887776544 45568866442111
Q ss_pred ccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHH---HHHHHHHHHH
Q 014646 142 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV---NVLGYIAYNF 218 (421)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~ 218 (421)
++.++ .+...++....+ +..+..++..+...++. +..+..+....... .....+....
T Consensus 225 ~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
T PRK10077 225 GKQEQ--AEGILRKIMGNT---LATQALQEIKHSLDHGR--------------KTGGKLLMFGVGVIVIGVMLSVFQQFV 285 (479)
T ss_pred CCHHH--HHHHHHHHcCCh---hHHHHHHHHHHHHHHhh--------------hhhhhhcchhHHHHHHHHHHHHHHHHh
Confidence 11110 000000000000 00000000000000000 00000111000000 0111111122
Q ss_pred HHHHHHHHhhhHHHHhhccchhh-HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--hc
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LS 295 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 295 (421)
..+...++.|.+.++ .+.+... ........+..+++.+++++++||++|| +.+..+..+..+..+.... ..
T Consensus 286 ~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 286 GINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred ChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhc
Confidence 233445667777655 4554332 3334556677889999999999999998 6666555554444333221 11
Q ss_pred h-h-HHHHHHHHHHHHHHhccc-cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhh------hhhhchhh
Q 014646 296 S-L-YGFLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRK 366 (421)
Q Consensus 296 ~-~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~ 366 (421)
+ . .......++.+++.+... +..+.++.|.+|+++|++++|+.+...+. +.++++.+.+.+. |..+ +..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~ 437 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGF 437 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-Ccc
Confidence 1 1 122222333333333323 45678888999999999999999766665 7777766665444 4444 345
Q ss_pred hhhHHHHHHHHHHHHhhhheeeec-ccccccccccc
Q 014646 367 TTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQ 401 (421)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 401 (421)
.+++.++..+++.++.+ ...+| |+++.+|.++.
T Consensus 438 ~~~~~~~~~~~~~~~~~--~~~~e~~~~~~~~~~~~ 471 (479)
T PRK10077 438 SYWIYGCMGVLAALFMW--KFVPETKGKTLEEMEAL 471 (479)
T ss_pred HHHHHHHHHHHHHHHHH--hccccCCCCCHHHHHHH
Confidence 56665554444433332 23344 44444444333
No 25
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.4e-32 Score=254.83 Aligned_cols=338 Identities=12% Similarity=0.020 Sum_probs=225.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|+++|++.+... ....++.|++|+++|+++
T Consensus 82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a 160 (476)
T PLN00028 82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTA 160 (476)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHH
Confidence 5678899999999999999999999999999999999999999999999999999988654 456678999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhh----c-----ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 152 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~----~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 152 (421)
+++.....++|..+++.+.+.+. + ..|||+.|++.+++.++..++.+++.++.++. +.++. . +
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~-----~~~~~-~-~- 232 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG-----NYREL-K-K- 232 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC-----chhhH-H-h-
Confidence 99998877777777766554432 2 25899999999998887776666553321110 00000 0 0
Q ss_pred cccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 014646 153 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
+ .+ .++ .+..+.+++.++++++|...+.+++.......+..+.|.|+.
T Consensus 233 -------------------~--~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 280 (476)
T PLN00028 233 -------------------S--GT-MPK----------DSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFY 280 (476)
T ss_pred -------------------c--Cc-ccc----------ccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 0 00 000 000123556678888887777666555556667788999998
Q ss_pred HhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccch-hh-HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 014646 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA-FK-LLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
+..+.+.... .+..+..++++++.++.|+++||++||...+ ++ .......+..+.++.....++.+...+.+++.++
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~ 360 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSI 360 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 8888886544 4456778899999999999999998763221 12 2222222232222333333333333334444444
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh--hhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--VNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
+.+...+....+..+ +.+++++++.|+.+. ++.+++.+.+++.+. .++|...|++.+++.+++.++.+..+
T Consensus 361 ~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~-----~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 361 FVQAACGATFGIVPF-VSRRSLGVISGLTGA-----GGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHhhhhhcccCcc-cChhhchhhhhhhhc-----cccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 444444444444444 456788988888743 334455556666553 24588888888877777766665443
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=7.3e-32 Score=244.40 Aligned_cols=313 Identities=14% Similarity=0.101 Sum_probs=227.9
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 66 ~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a 145 (394)
T PRK10213 66 FVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKA 145 (394)
T ss_pred HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+.++|.+++|++++.+.+.+|||+.|++.+++.++..+......||.++ +++..
T Consensus 146 ~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~------~~~~~-------------- 205 (394)
T PRK10213 146 LSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG------EPSHQ-------------- 205 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc------ccccc--------------
Confidence 9999999999999999999999999999999999887666554444333344210 00000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHh-hhHHHHhhccchh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG-PKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (421)
.++.++.+++|.++...+..++..........+. |.+. +..+.++.
T Consensus 206 --------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~ 252 (394)
T PRK10213 206 --------------------------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVD 252 (394)
T ss_pred --------------------------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChh
Confidence 0123356678888876665555555555556665 5554 45677754
Q ss_pred hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.. .......++++++.++.+++.||.+++ .............+++....++.+.......+.+++.+...+...
T Consensus 253 ~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 327 (394)
T PRK10213 253 GLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWS 327 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 44 334556678888888999999985433 333333332333333333344555555566667777777777777
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHH
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 375 (421)
+.+.+..| ++++++.+......+ +|..+||.+.|++.|..| +...+...+.+.
T Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~-lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~ 380 (394)
T PRK10213 328 TWITRSLA-DQAEKAGSIQVAVIQ-LANTCGAAIGGYALDNIG-LTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHCc-ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccC-hhhHHHHHHHHH
Confidence 77888776 456677776644444 488999999999999876 545555554443
No 27
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-32 Score=247.18 Aligned_cols=349 Identities=15% Similarity=0.152 Sum_probs=261.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc--hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCch
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.|+++++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|..+|+...+.++|.|++||+
T Consensus 84 ~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers 163 (466)
T KOG2532|consen 84 WGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERS 163 (466)
T ss_pred HHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHH
Confidence 68999999999999999999999999999999999998875 4567899999999999999999999999999999999
Q ss_pred hHHHHHHhHHHHHhHHHHHHHHHhhcc-cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccc
Q 014646 80 AWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+..++..++..+|.+++-+++|++.+. +||+++|++.++++++..++++++..|+|.+++.-.+++
T Consensus 164 ~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~E------------- 230 (466)
T KOG2532|consen 164 TFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKE------------- 230 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHH-------------
Confidence 999999999999999999999999988 999999999999999998888877655433311111000
Q ss_pred cCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
.+.+++.+.++..+++ ...+++++++++.+|...+..++.+...+.+..|+|.|+++..+++
T Consensus 231 -------l~~I~~~k~~~~~~~~-----------~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~ 292 (466)
T KOG2532|consen 231 -------LKYIEKGKSEAHVKKK-----------PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD 292 (466)
T ss_pred -------HHHHHhcccccccCCC-----------CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC
Confidence 0111111111100000 1257999999999999999999999999999999999999999999
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhccccc---chhhHH-HHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHH
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLL-SAATFLGAISCLTAFCLS--SLYGFLALFTVGELLV 311 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 311 (421)
..+. .+++++.+...+..+++|.++||+.+|.. ..++.. .++....++.++.+.+.+ +.+..++++.+.....
T Consensus 293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~ 372 (466)
T KOG2532|consen 293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS 372 (466)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc
Confidence 6555 66689999999999999999999877411 123444 333333444444444443 2323333333333333
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh-h-hhchhhhhhHHHHHHHHHHHHhh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-H-VNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+...+ ..........|++.+..+|+.|..... .++++|.+.|.+.. . ...|+..|++.+++.+++.+++.
T Consensus 373 g~~~~-Gf~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 373 GFNIS-GFYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFL 444 (466)
T ss_pred ccchh-hhHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhee
Confidence 33333 333333333678999999999877777 77889999999983 2 34688888888888777775544
No 28
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=9.9e-32 Score=243.30 Aligned_cols=322 Identities=15% Similarity=0.154 Sum_probs=229.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 49 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (382)
T PRK10091 49 LGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAA 128 (382)
T ss_pred HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHH
Confidence 57789999999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|++++.+.+..+||+.|++.+++.++..+..++..||.+++ ++.+ .
T Consensus 129 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~----~~~~-~-------------- 189 (382)
T PRK10091 129 VAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE----AKGG-L-------------- 189 (382)
T ss_pred HHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc----cccC-H--------------
Confidence 99999999999999999999999989999999999988777666555555653210 0000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.+.+ +.++++..+......++..........+.+.++.+..+.++..
T Consensus 190 --------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 236 (382)
T PRK10091 190 --------------------------------REQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS 236 (382)
T ss_pred --------------------------------HHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0011 2345555555544444444444455566777787777777654
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH-HhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA-FCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .+.....++.+++.++.+++.||++++ +.+.....+..+..+.. ...++.+.......+.+.+.....++..
T Consensus 237 ~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 237 MTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4 445677788999999999999999987 55555544444443332 2233333333333344444433334333
Q ss_pred h-hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 320 Y-VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 320 ~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
. ...+..+++.++.+. .+...+. |..+||.+.|++.|..++|...+...+....+......
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 312 ILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 3 333434445555543 3344444 88999999999999877788888877666555554444
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.5e-32 Score=249.40 Aligned_cols=333 Identities=15% Similarity=0.171 Sum_probs=236.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 41 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 120 (379)
T TIGR00881 41 IAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTW 120 (379)
T ss_pred HHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheee
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHH-HHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~-~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++.+.+..+|..+++ .++..+.+..+||+.|++.+++.++..++.++..||.++....++.++..
T Consensus 121 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 187 (379)
T TIGR00881 121 VSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP------------- 187 (379)
T ss_pred EeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc-------------
Confidence 9999999999999999 57777777889999999998887777776666666543321111000000
Q ss_pred CCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh
Q 014646 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
. ++.++. .+ +.+++ ........+.++++|.++...+..++.......+..+.|.|+++..+.++.
T Consensus 188 ~-~~~~~~----~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 188 N-EEPDGD----AE-KKEEE---------LTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred c-cccccc----cc-ccccc---------ccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 0 000000 00 00000 000012345677889888888888888888888889999999988888765
Q ss_pred hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHHhccccc
Q 014646 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
.. .......++.+++.++.+++.||..++++. ................... ..+.........+.+.+.....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQML 330 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHH
Confidence 44 444667788899999999999986543211 1111111111122222221 122233333334444444444444
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhh
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 366 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 366 (421)
......+.+|++.|+++.|+.+...+. |..++|.+.|.+.|..| |+.
T Consensus 331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 331 IGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHhhc-ccc
Confidence 566788889999999999999766666 88899999999999866 543
No 30
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=6.3e-32 Score=247.77 Aligned_cols=322 Identities=10% Similarity=0.013 Sum_probs=230.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhc-----ccchhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-----SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+..+ ..++++.+++.|+++|++.+...+...+++.|++|++
T Consensus 63 l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 142 (417)
T PRK10489 63 GAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE 142 (417)
T ss_pred HHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH
Confidence 56788999999999999999999988887777665543 2578899999999999999988888899999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
+|+++.++.....++|..+||.+++.+.+..+|++.|++.++..++..++.+ ..|+.+++. ++++ .
T Consensus 143 ~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~---~~~~-~--------- 208 (417)
T PRK10489 143 NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPALPPPP---QPRE-H--------- 208 (417)
T ss_pred HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCCCCCC---cccc-c---------
Confidence 9999999999999999999999999999888999999988877665544433 335432110 0000 0
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
..++..+.++.++++|.++...+..++... ......+.|.|.++..+
T Consensus 209 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g 255 (417)
T PRK10489 209 --------------------------------PLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQ 255 (417)
T ss_pred --------------------------------chHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccC
Confidence 000112235556777777665554443332 35567788999998777
Q ss_pred cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccc
Q 014646 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
.++... .+.....++.+++.++.+++.||.+++ +.+.....+..+..+.....++.+...+..++.+++.+...
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 775444 334566778888999999999886554 44444444444444444444555555555555666665555
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHH
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 377 (421)
+...+++.+..|++.|++++|+.+...+. |..++|.+.|++.|..|. ...+...+.+..+
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g~-~~~~~~~~~~~~~ 390 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMTP-VASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhch-hhHHHHHHHHHHH
Confidence 55677888889999999999999765555 999999999999998773 3455544444333
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.5e-31 Score=246.41 Aligned_cols=316 Identities=14% Similarity=0.107 Sum_probs=216.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++
T Consensus 64 ~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~ 143 (426)
T PRK12307 64 IGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKA 143 (426)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHh
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|.++++.+.+.+.+..+||+.|++..+..++ .+......||++++. +++.. +.+.
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~----~~~~~----------~~~~ 208 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEWE----EAKLS----------GKGK 208 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHH----Hhhhh----------cccc
Confidence 99999999999999999999998989999999986443222 111111113221110 00000 0000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHH---HHHHHHHHHHHHhhhHHHHhhccc
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI---AYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
. .+ ...++...+++++++++.++....... ........+..++|.|+++. +.+
T Consensus 209 -----------~----~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 264 (426)
T PRK12307 209 -----------H----SQ--------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFD 264 (426)
T ss_pred -----------c----cc--------cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 0 00 000001124556777777665443222 22223334567889888874 555
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH--hccc
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV--FATQ 315 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 315 (421)
+... .......++.+++.++.+++.||++|| +....+.++..+..+...............++.+.+. ....
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVG 339 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHh
Confidence 4333 344666788899999999999999988 6555555444443333322221111111222222211 1223
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+.....+.+.+|++.|++++|+.+...+. ++.++|.+.|++.+..|
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence 34556778999999999999999767666 88899999999999876
No 32
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=241.52 Aligned_cols=322 Identities=12% Similarity=0.090 Sum_probs=233.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 53 ~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~ 132 (394)
T PRK03699 53 AGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSR 132 (394)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhh-cccchhHHHHHhHHHHHHHHHHHHhcc-cccccccCCcccccchhhhccccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
++..+....+|..++|.+.+.+. +..+||+.|.+.+++.++..++.++.. |+ +++++.. +
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~---~-------- 194 (394)
T PRK03699 133 LLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA-------LGKHAPK---A-------- 194 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccccCcc---c--------
Confidence 99999999999999999888775 457999999998887766555443321 11 0000000 0
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
. + +. .+. ..++.++...+..++.....+.+..|.|.|+++.++.++
T Consensus 195 -~--------------~-~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 240 (394)
T PRK03699 195 -D--------------K-PV-----------------AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSL 240 (394)
T ss_pred -c--------------C-cc-----------------ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 0 0 00 000 013445555565666666677888999999998888886
Q ss_pred hhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.+. .+.....++..++.++.+++.||+++| +.+.....+...........++.+...+..++.+++.+..++..
T Consensus 241 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 241 EDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 544 444666788899999999999999998 55554444444444444344444444445555666665565655
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.....+..| +.+++..+..+...+ +|..++|.+.|++.|..| +...++...++.+++....+
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~-~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 316 ITLGSQQTK-VASPKLVNFILTCGT-IGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHhhh-HHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHH
Confidence 656666554 445677787765555 488999999999999877 66777766666555544444
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=8.9e-32 Score=246.67 Aligned_cols=337 Identities=11% Similarity=0.063 Sum_probs=228.5
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 58 ~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 137 (405)
T TIGR00891 58 ISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKA 137 (405)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccc--hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
+++.+.+..+|.++++.+++.+.+..+ ||+.|++.+++.++.. +.....||++++.+++++.+..
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------ 204 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------ 204 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------
Confidence 999999999999999999999887766 9999988765544433 3333345533211000000000
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhh-c-hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcc
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL-Q-EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
.+..++....++..+ ...++.....+... + .+.+..........+........+.|.|+.+..+.
T Consensus 205 ------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (405)
T TIGR00891 205 ------RTMVDILYGGEHRIA-------NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL 271 (405)
T ss_pred ------hhHHHHHhccchhhh-------hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence 000000000000000 00000001111111 1 11222223333333444556667889999888887
Q ss_pred chhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH-HHHhhchhHHHHHHHHHHHHHHhccc
Q 014646 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAFCLSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
+..+. .+.....++.+++.++.+++.||++|| +.+............ .....++.+...+...+.+++.....
T Consensus 272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
T TIGR00891 272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIW 346 (405)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccch
Confidence 76544 444667788899999999999999998 555544443322222 22223343444444345555555666
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhH
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 370 (421)
+.....+.+.+|++.|++++|+.+...+. |..++|.+.|.+.|+.|.|...+..
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 347 GILPKHLGEYFPTDQRAAGLGFTYQLGNL-GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred hhHHHHHhhhCCcchhHHHhhHHHHHHHH-HHHHHHHHHHHHHHhccccchhHHh
Confidence 67778889999999999999999777666 8899999999999998866554443
No 34
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.8e-31 Score=245.83 Aligned_cols=350 Identities=12% Similarity=0.074 Sum_probs=233.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc----chhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++..+++++.|+++||+|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.+..++.....+.|++|+++
T Consensus 72 ~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~ 151 (438)
T TIGR00712 72 IAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE 151 (438)
T ss_pred HHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc
Confidence 4677899999999999999999999999999998887764 467788899999999999888888899999999999
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhh-cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++++++.+.++|..+++.+.+... ...+||+.|++.++++++..++.+++.||.+++...++.++.+
T Consensus 152 rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--------- 222 (438)
T TIGR00712 152 RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR--------- 222 (438)
T ss_pred chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc---------
Confidence 999999999999999999988776544 4568999999999988887777666667644321110000000
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
++.. .+ ..++ .+.+ .+.++. ..+.+++++.++...+..++.....+++..|.|.|+++..+
T Consensus 223 -~~~~----~~-~~~~-----~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 283 (438)
T TIGR00712 223 -NDYP----DD-YNEK-----AEQE------LTAKEI--FMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKH 283 (438)
T ss_pred -cccc----cc-cccc-----cccc------cchHHH--HHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccC
Confidence 0000 00 0000 0000 000010 11246788889888777777777777888999999998878
Q ss_pred cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHH-HHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHHh
Q 014646 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA-ATFLGAISCLTAFC--LSSLYGFLALFTVGELLVF 312 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 312 (421)
.++... ....+..+.++++.++++++.||++++++ ..... .........+.... ..+.+.........+++..
T Consensus 284 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 360 (438)
T TIGR00712 284 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR---GATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIY 360 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHc
Confidence 776544 34456677889999999999999965421 11111 11111111111111 1222222222222232221
Q ss_pred ccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 313 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
...........+.+|++.|++++|+.+...+..|.+++|.+.|.+.|..| |...+.+..+..+++.+..+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHH
Confidence 11111223566888889999999999766666345689999999999876 77777776665555554444
No 35
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=2.1e-31 Score=243.32 Aligned_cols=318 Identities=14% Similarity=0.088 Sum_probs=227.2
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhH--------HHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
..+++++.|+++||+|||+++..+.++..++.++++++++++ .+++.|+++|++.+...+....++.|++|+
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP 127 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc
Confidence 456889999999999999999999999999999999999875 478899999999999999999999999999
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhh--------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccch
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 147 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (421)
++|++..++.+.+..+|.++++.++..+. +.++||+.|++.+++.++...+ ....||+++...++++++
T Consensus 128 ~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 204 (394)
T TIGR00883 128 GKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQEKHK-- 204 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHhccc--
Confidence 99999999999999999999998876653 3568999999877655443322 222243221100000000
Q ss_pred hhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhh--HHHHHHHHHHHHHHHHHHHH
Q 014646 148 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV--YVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~ 225 (421)
+. ..+.++.++++. ++......++..........
T Consensus 205 -------------------------------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T TIGR00883 205 -------------------------------KK-------------RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITT 240 (394)
T ss_pred -------------------------------cc-------------cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 012333444443 55555555666666777788
Q ss_pred HhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHH-H-HHHHHh--hchhHHH
Q 014646 226 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-S-CLTAFC--LSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~--~~~~~~~ 300 (421)
+.|.|.++..+.++... .......+...++.++.+++.||++|| +.+.....+... . ...... .++.+..
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-----PVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 99999988777775444 344566778889999999999999988 544433222222 2 111111 2344444
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 373 (421)
.....+.+++.+...++......|.+|++.|+++.++.+...+.+|..++|.+.|++.|+.|.+...++....
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 5555666666767778888999999999999999998645555558889999999999988755454444443
No 36
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-31 Score=238.58 Aligned_cols=380 Identities=14% Similarity=0.120 Sum_probs=251.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+|.++|+...+.++||+|||..+.++.++..++.++..++ +++++++++|++.|+..|......+.++.|..|++.|
T Consensus 71 iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~R 150 (485)
T KOG0569|consen 71 IGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLR 150 (485)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhc
Confidence 6889999999999999999999999999888888877654 6899999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHH--HhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|..-.+.+.+..+|.+++..++. .+.+...|++.+....+++++..+... +.||+|++.-.. +++..+++...+..
T Consensus 151 G~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~-k~~~~~A~~sl~~y 228 (485)
T KOG0569|consen 151 GALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIK-KGDEEEARKALKFY 228 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHH-cCCHHHHHHHHHHH
Confidence 99999999999999999977763 344556799999999988776655544 459999875432 22222222222333
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHH-----HHHHHHHHHHHHHHHHHhhhHH
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-----VLGYIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 231 (421)
+..+++++..+...++.++++.+++. ..+++++++++..+.- .+.......+.+....|...++
T Consensus 229 ~G~~~~~~~~e~~~~e~~~~~~~~~~-----------~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~ 297 (485)
T KOG0569|consen 229 RGKEDVEAEIEEMLREIEEEELEKKK-----------QISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF 297 (485)
T ss_pred hCCCcchhHHHHHHHHHHHhcccccc-----------CCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence 33332222222211111111111100 1235566665544432 2222223334556666777777
Q ss_pred HHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh----ch--hHH---HH
Q 014646 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SS--LYG---FL 301 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~---~~ 301 (421)
++. |.++..+ ......+....+.++++.++.||.||| ++++.+..++.+..+++... .. .|. .+
T Consensus 298 ~~a-G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 298 KTA-GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 664 4554443 555667788899999999999999999 77776666655554433221 11 111 23
Q ss_pred HHHHHHHHHHhccccc-hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 302 ALFTVGELLVFATQAP-VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
+..++..+..+...++ .+.+.+|.+|++.|+.++++.....+. ..++-...+..+.+..|.+ .|+.+.+. +...
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~~--~filF~i~--~~~~ 446 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGPY--VFILFVIP--LAIF 446 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcch--hhHHHHHH--HHHH
Confidence 3344444444444444 466677888889999999999777776 6666677888899988852 34444333 3333
Q ss_pred Hhhhheeeec-ccccccccccccccC
Q 014646 381 IWFVGIFLKS-IDKFNEDGENQISLD 405 (421)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 405 (421)
..+.++++|| |+|+.+|..++.+++
T Consensus 447 ~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 447 LIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 3444557787 888877766655433
No 37
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.4e-31 Score=249.65 Aligned_cols=342 Identities=13% Similarity=0.077 Sum_probs=243.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccC-CCCCchh
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTA 80 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~ 80 (421)
++++++++++|+++||+|||++++.+.+++.++++++++++|++.++++|+++|++.+...+.....+.+++ |+++|++
T Consensus 52 l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~ 131 (495)
T PRK14995 52 LVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNM 131 (495)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 466788999999999999999999999999999999999999999999999999999998888888787765 6789999
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcc-------c
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV-------S 153 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------~ 153 (421)
+++++.....+|..+||.+++.+.++.||||.|++...+.++..++.++..|+.+++. .++.+....... .
T Consensus 132 ~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~ 209 (495)
T PRK14995 132 ALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLV 209 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887777776666667643211 011100000000 0
Q ss_pred ccccccCCCcccccc-chh-------hhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 014646 154 EGSEASNLNDHVSED-ISD-------QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
............... ... -......+.+ .++...+ .+++++|.+....+..++......+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~--------~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~ 280 (495)
T PRK14995 210 YSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLA--------ASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFEL 280 (495)
T ss_pred HHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhc--------CCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000 000 0000000000 0011112 3577888888877777777777788888
Q ss_pred HhhhHHHHhhccchhhHHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh---hchhHHHH
Q 014646 226 WGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LSSLYGFL 301 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 301 (421)
+.|.|+++..+.++.+... .....++..++.++.|++.||+++| +.+..+..+..+....... ..+.+...
T Consensus 281 ~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 355 (495)
T PRK14995 281 LMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAW 355 (495)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 9999999999998766643 4556678889999999999999987 5555554444443332221 12344445
Q ss_pred HHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
...++.+++.+...++......+.+|+++++.+.++.+...+. |..+|+.+.|.+.++
T Consensus 356 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 356 GLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYEL-GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 5667778888888888888888999999999999999766666 888899899888774
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.2e-31 Score=251.57 Aligned_cols=367 Identities=14% Similarity=0.141 Sum_probs=228.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++++++++++|+++||+|||++++++.+++.++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|
T Consensus 82 ~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 161 (481)
T TIGR00879 82 VGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALR 161 (481)
T ss_pred HHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhh
Confidence 5678999999999999999999999999999999998554 4566899999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHH---HHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++++++++.+..+|..+++.++ ....+..+||+.|++.++..++.. +..++.||+++....+++.+.. .+...+
T Consensus 162 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ 238 (481)
T TIGR00879 162 GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEA--RKSLAR 238 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHH--HHHHHH
Confidence 9999999999999999999999 676677899999999766554443 4444557754321111111110 000000
Q ss_pred ccccCCCc-cccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Q 014646 156 SEASNLND-HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 156 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
....+..+ +..+...........+.+..+ ...++.+...+. .+++.++...+..+...........+.|.+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 313 (481)
T TIGR00879 239 LRGTSGEDKELLDELELIDIKRSIEKRSVQ---PSWGSLFSSTRR-IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN- 313 (481)
T ss_pred HhCCCCCcHHHHHHHHHHHHHHHHHHhhcc---ccHHHHHhcCch-hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-
Confidence 00000000 000000000000000000000 001111111111 123344444444444444445556677777665
Q ss_pred hccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH---h-hch------hHHHHHH
Q 014646 235 YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---C-LSS------LYGFLAL 303 (421)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~------~~~~~~~ 303 (421)
.+.+.... .......++.+++.++.+++.||++|| +.+.....+..+..+... . ..+ .......
T Consensus 314 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (481)
T TIGR00879 314 AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVF 388 (481)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHH
Confidence 45554333 445667788889999999999999998 555544444443333322 1 111 2222233
Q ss_pred HHHHHHHHhc-cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 304 FTVGELLVFA-TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 304 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
..+...+.+. ..+....++.|.+|++.|++++++.+...+. |.+++|.+.+.+.++.+ +...|++.+++.+++.+..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 389 ILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-ANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHH
Confidence 3333333333 3344455668888889999999999766666 88899999999998766 6677777766655555444
Q ss_pred h
Q 014646 383 F 383 (421)
Q Consensus 383 ~ 383 (421)
+
T Consensus 467 ~ 467 (481)
T TIGR00879 467 Y 467 (481)
T ss_pred h
Confidence 3
No 39
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=8.9e-31 Score=239.41 Aligned_cols=310 Identities=13% Similarity=0.037 Sum_probs=229.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+..+.+++.+.+.++++++.+++.|+++|++.+...+...+++.|++|+++|.++
T Consensus 59 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 138 (406)
T PRK15402 59 AGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKI 138 (406)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||++++. +++ .
T Consensus 139 ~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-------------- 199 (406)
T PRK15402 139 TALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRV----GEK-L-------------- 199 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccc----ccc-c--------------
Confidence 999998889999999999999999899999999998887776665555556532110 000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.++..++++.++++|.++...+..++..........+.|.++.+..+.++..
T Consensus 200 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~ 252 (406)
T PRK15402 200 ---------------------------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE 252 (406)
T ss_pred ---------------------------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH
Confidence 00011234567788998888777666666666666677888888877877654
Q ss_pred HHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh-----hchhHHHHHHHHHHHHHHhccc
Q 014646 242 MMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
... .....++.+++.++.+++.||+++| +.+................ ..+.+.......+.+++.+...
T Consensus 253 ~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 253 YGLLQVPVFGALIAGNLTLARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh
Confidence 432 2344567788899999999999987 5554444433333222221 1233334445555666666555
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 364 (421)
+........ .++++++++.+.++..... +..+|+.+.+.+.+..+.+
T Consensus 328 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~-~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 328 AGLYRLTLF-SSDVSKGTVSAAMGMLSML-IFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred hhHHHHHhh-hccccccHHHHHHHHHHHH-HHHHHHHHHHhcccCCchH
Confidence 555544433 3458999999999766665 7788999999998876644
No 40
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=8e-31 Score=238.09 Aligned_cols=303 Identities=14% Similarity=0.112 Sum_probs=217.3
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...|...+++.|++|+++|+++++
T Consensus 59 ~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 138 (400)
T PRK11646 59 QQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFS 138 (400)
T ss_pred HHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 34557899999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCc
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 163 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (421)
+.....++|..+||.+++.+. .+|||+.|++.++..++..++..+..||... +++..
T Consensus 139 ~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~------~~~~~---------------- 195 (400)
T PRK11646 139 LLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL------STVRT---------------- 195 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc------cccch----------------
Confidence 999999999999999999998 6799999999988776665555544454110 00000
Q ss_pred cccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHH
Q 014646 164 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM 243 (421)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+..+++++++++|.++...+..+...........+.|.|.++.++.+.....
T Consensus 196 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 247 (400)
T PRK11646 196 ----------------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKW 247 (400)
T ss_pred ----------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHH
Confidence 0012355667788777655544444444444556789998887664432223
Q ss_pred HHhhHhHHHHHHHhHHHHHHHh-hcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhh
Q 014646 244 FGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
......+....+....+++.|| .+.+ +.+..+..+..+........++.+.......+.+.+.+...+......
T Consensus 248 l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~ 322 (400)
T PRK11646 248 MYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLS 322 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3334444444444444555544 4433 333333333333333333444444444444555566666667778889
Q ss_pred hcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc
Q 014646 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 363 (421)
.+..|+++|++++|+.+...+. |..+||.+.|++.|+.++
T Consensus 323 ~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~~ 362 (400)
T PRK11646 323 ASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGKA 362 (400)
T ss_pred HhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHhh
Confidence 9999999999999999766666 889999999999998653
No 41
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=9.7e-31 Score=238.80 Aligned_cols=317 Identities=13% Similarity=0.071 Sum_probs=222.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc--------chhHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++++++++.|+++||+|||++++.+.++++++.+.+.++ .+++.+++.|+++|++.+...+....++.|++
T Consensus 62 ~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 141 (399)
T PRK05122 62 LATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV 141 (399)
T ss_pred HHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc
Confidence 5678899999999999999999999999888877765543 25778999999999999999999999999999
Q ss_pred CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccc
Q 014646 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
|+++|++++++.+.+..+|.++|+.+++.+.+.+|||+.+++..+..++..+.. ...|+.+ +++++ .
T Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~------ 208 (399)
T PRK05122 142 GALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVP-----PVKGE-R------ 208 (399)
T ss_pred ChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCC-----CCCcc-c------
Confidence 999999999999999999999999999999999999999888766543322211 1112110 00000 0
Q ss_pred ccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014646 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
.+.++.++ ..+.......+..........+.|.|..+
T Consensus 209 -----------------------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (399)
T PRK05122 209 -----------------------------------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA 245 (399)
T ss_pred -----------------------------------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111 11111122223344455566777877765
Q ss_pred hhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhc
Q 014646 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
. +.+.. ........++.+++.++.+++.||+++| +.+.....+...........++.+...+...+.+++.+.
T Consensus 246 ~-~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 318 (399)
T PRK05122 246 R-GWDGA-ALALTLFGVAFVGARLLFGNLINRLGGL-----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSL 318 (399)
T ss_pred c-ccccc-hHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHH
Confidence 4 33322 2233456677788999999999999987 666555555555444444455555555556667777766
Q ss_pred cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+.......+..|+++|+++.|+++...+. |..++|.+.|.+.|..| ++..+...+.+.+++.+...
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 319 VFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHH
Confidence 6666666777888999999999999766666 77778889999999876 77777777666655554443
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.6e-30 Score=235.71 Aligned_cols=322 Identities=11% Similarity=0.054 Sum_probs=226.8
Q ss_pred cccchhhHHHhhhhhcCchHHHH-HHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+..+.+++.|+++||+||||.++ .+.++..++.++++++++++.+++.|+++|.+.+...|...+++.|+.|+++|++.
T Consensus 45 ~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~ 124 (375)
T TIGR00899 45 VGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAV 124 (375)
T ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhH
Confidence 45677899999999999988755 45666677788889999999999999999988888888888889999887777654
Q ss_pred --HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 82 --LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 --~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.+....+.++|.+++|.+++.+.+.++||+.|++.+++.++..++.++..||.+++.. ++.+ .
T Consensus 125 ~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------ 189 (375)
T TIGR00899 125 MFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAP--GALT-R------------ 189 (375)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcc--cccC-c------------
Confidence 6788888999999999999999998999999999998877777776666676432110 0000 0
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
.+.++.++++.++......++..........+.|.++++..+.++
T Consensus 190 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 234 (375)
T TIGR00899 190 -----------------------------------LEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPD 234 (375)
T ss_pred -----------------------------------chhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCH
Confidence 011223455555554444444444445556678888888777776
Q ss_pred hhHH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 240 ADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.... .........+++.++.+++.||+++| +.+.................++.+.......+.+++.+...+..
T Consensus 235 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 235 KLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5442 23344455677788999999999988 55554444444333333334455545545555566666555666
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
..+..+..| +++++++++.+...+. |..++|.+.|.+.|..| ++..+...+++.+++.+..
T Consensus 310 ~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 310 MLYFQDLMP-GRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHhCc-chhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHH
Confidence 666777665 4567999999777665 88999999999999876 7777777766655555544
No 43
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.5e-30 Score=237.18 Aligned_cols=319 Identities=10% Similarity=0.030 Sum_probs=220.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|++++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|++.+...+....++.|++|+++|+++
T Consensus 62 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (413)
T PRK15403 62 AGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKL 141 (413)
T ss_pred HHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999987777777889999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..+||.+++.+.++.|||+.|++.+++.++..+..++..||+++. ++++. .
T Consensus 142 ~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~-~-------------- 203 (413)
T PRK15403 142 MAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPF-S-------------- 203 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCC-C--------------
Confidence 99999999999999999999999888999999999988777766555555764321 00000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++..++++.+++||.++...+...+.......+..+.|.++++.++.++..
T Consensus 204 ----------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~ 255 (413)
T PRK15403 204 ----------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ 255 (413)
T ss_pred ----------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH
Confidence 0011245677889999998888777777777788888999999988888665
Q ss_pred HHHH-hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHH--HHHHHHHHHHHH--HhhchhHHHHHHHHHHHHHHhcccc
Q 014646 242 MMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSA--ATFLGAISCLTA--FCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
..+. .....+.+++..+.+++.++..+++ ..... ....+....... ...++.+..+...++.+++.+...+
T Consensus 256 ~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p 331 (413)
T PRK15403 256 FAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFP 331 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhH
Confidence 5433 3344555666666666554333321 11111 111111111111 1122222234455555666666655
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
........ -.+..+|++.++.+..... +...++...+++.++. -..++.....+
T Consensus 332 ~~~~~al~-~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~~--~~~~~~~~~~~ 385 (413)
T PRK15403 332 TLFRFTLF-SNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFNG--GRLPFHLLAVV 385 (413)
T ss_pred HHHHHHhc-cCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHcC--CchHHHHHHHH
Confidence 55533321 1223478899988766655 5566777888877762 22444444433
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2.1e-31 Score=239.54 Aligned_cols=305 Identities=19% Similarity=0.288 Sum_probs=225.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 43 ~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 122 (352)
T PF07690_consen 43 LGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRA 122 (352)
T ss_dssp HHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhc
Confidence 46778999999999999999999999999999977777768888999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+.++|.+++|.+++.+.+..+||+.|++.+++.++..++..++.++.++..+.+++.+..
T Consensus 123 ~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------- 188 (352)
T PF07690_consen 123 FGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------- 188 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------
T ss_pred cccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------------
Confidence 999999999999999999999999999999999999988888775555555433221111111000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc-hh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-NA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (421)
. +..++..+.++.++++|.+|......++..........+.|.|+.+..+.+ ..
T Consensus 189 -------------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (352)
T PF07690_consen 189 -------------S------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPS 243 (352)
T ss_dssp ---------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHH
T ss_pred -------------c------------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHH
Confidence 0 000000012556667777765555556666677778899999988888888 44
Q ss_pred hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH---HhhchhHHHHHHHHHHHHHHhcccc
Q 014646 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---FCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
.. .+..+..+.++++.++.+++.||++++ +................ ...++....+....+.+++.+...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 318 (352)
T PF07690_consen 244 QAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFP 318 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44 445667788888899999999999886 33333333322222222 2223444555566667778888888
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCch
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
.......+.+|+++++++.|+.+...+. |..++|
T Consensus 319 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 319 ILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 8999999999999999999999766665 766655
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.3e-30 Score=235.65 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=227.5
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++..++.+.++++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 51 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (385)
T TIGR00710 51 LGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRI 130 (385)
T ss_pred HHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..+++.+++.+.++.+||+.|++.++..++..+..++..||.++.. +++..
T Consensus 131 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------- 192 (385)
T TIGR00710 131 YSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE----ARIQI-------------- 192 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----ccCCH--------------
Confidence 999999999999999999999999899999999998887777666666555532110 00000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
++..+.+++++++|.++...+..............+.|.++++..+.++..
T Consensus 193 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 193 -----------------------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred -----------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence 000123556778888887777666666667777788899988888877655
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-----chhHHHHHHHHHHHHHHhccc
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 315 (421)
. .......++.+++.++.+++.||+++| +.+........+..+..... .+.........+.+++.+...
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 4 344566788899999999999999987 44443333333322222111 122233334445556666666
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+.......+..| +.++++.++.+......|.+.+| +.+.+.+
T Consensus 319 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 319 SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 666677777665 67899999998777776666655 4554444
No 46
>PRK10504 putative transporter; Provisional
Probab=99.98 E-value=2.6e-30 Score=241.06 Aligned_cols=343 Identities=13% Similarity=0.092 Sum_probs=236.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.+++|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 56 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (471)
T PRK10504 56 LTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAA 135 (471)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhc-c-----cc-
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS-V-----SE- 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~-----~~- 154 (421)
+++.....++|..++|.+++.+.++.|||+.|++......+..++.....|+.... +.+.+...... . ..
T Consensus 136 ~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~~~~ 212 (471)
T PRK10504 136 MTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQ---TRRFDLSGFLLLAVGMATLTL 212 (471)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877766666655554543211 00101000000 0 00
Q ss_pred cccccCCCccccccchhh--------hhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHH
Q 014646 155 GSEASNLNDHVSEDISDQ--------ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 226 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (421)
..+..+............ .....++...+ +...+. ++++||.+.......++..........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 283 (471)
T PRK10504 213 ALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN--------RALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFM 283 (471)
T ss_pred HHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC--------CCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000000 00000000000 001122 4678999988887777777777777788
Q ss_pred hhhHHHHhhccchhhHH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh---chhHHHHH
Q 014646 227 GPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLA 302 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 302 (421)
.|.|++...+.++.... ......++.+++.++.+++.||+++| +.+..+..+..+........ ++.+....
T Consensus 284 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
T PRK10504 284 TPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVATTLGLALVSLLFMLVALLGWYYLLPF 358 (471)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence 89999887777765443 33445566677778899999999988 66665555444443333322 22222233
Q ss_pred HHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
...+.+.+.+...+.......+.+|++.++.++++.+..... |..+|+.+.|.+.+..+
T Consensus 359 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 359 VLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Confidence 344455666666777788888899999999999999766666 88999999999988765
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=2e-30 Score=237.79 Aligned_cols=326 Identities=14% Similarity=0.132 Sum_probs=235.9
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+ ..+....++.|++|+++|+++
T Consensus 65 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (408)
T PRK09874 65 LFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWA 143 (408)
T ss_pred HHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHH
Confidence 3567889999999999999999999999999999999999999999999999999865 567777889999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++..||..+.. ++++..
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 206 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKEML-------------- 206 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchhhh--------------
Confidence 999999999999999999999998889999999999887776666666555432110 000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHH-HHHHHHHHHHHHHHHHHhhhHHHHhhccchh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
+ .++..+.++++.++.. ................+.|.|..+..+....
T Consensus 207 ---------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
T PRK09874 207 ---------------------------H----MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSN 255 (408)
T ss_pred ---------------------------H----HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 0 0011223455554432 2223333444445566777787775443321
Q ss_pred h----HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhcccc
Q 014646 241 D----MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 ~----~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
. ..+..+..++.+++.+..+++.||+++| +.+........+..+.....++.+...+...+.+++.+...+
T Consensus 256 ~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 256 IAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHH
Confidence 1 1223445567778888899999999988 665555555544444444445555555555666777777777
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.......+..|++.+++..++.+...+. |..++|.+.|.+.+..| |...|...+++.+++.+...
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 331 AVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHH
Confidence 7777788888889999999999766665 88999999999999876 77888877776666555443
No 48
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.4e-31 Score=242.02 Aligned_cols=319 Identities=17% Similarity=0.169 Sum_probs=227.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+||+++.+++|.+.||++..+.+....+++++..++....+|++.+++.|+++|+.++..+|....+++.|+.++||++.
T Consensus 92 v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r 171 (495)
T KOG2533|consen 92 VGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLR 171 (495)
T ss_pred HHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhh
Confidence 68999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHh------hcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++++.+..++|.++|++++..+ ....||||.|++.++++++.++++++++|+.+....-.++.+.
T Consensus 172 ~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek--------- 242 (495)
T KOG2533|consen 172 MGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEK--------- 242 (495)
T ss_pred HHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHH---------
Confidence 9999999999999999999886 3456999999999999999999999999886542210000000
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
+...++.++++.+...++ ..+..+++.+++|.+|...+..++.....+++.+|+|.++.+..
T Consensus 243 -----------~~~~~~~~~~~~~~~~~~-------~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~ 304 (495)
T KOG2533|consen 243 -----------ELVVERLRESPSGGIENK-------FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG 304 (495)
T ss_pred -----------HHHHHHHHhccCCCcccc-------cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC
Confidence 000000000000000000 11356788899999999999999999999999999999999955
Q ss_pred ccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhc----ccccchhhHHH-HHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 014646 236 HMSNADM-MFGGVTIVCGIVGTISGGFILDQMG----ATISNAFKLLS-AATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
+++..+. .+.....++++++.+++|+++||+. +| .... ...+........+..................
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~-----~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~ 379 (495)
T KOG2533|consen 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR-----LLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPY 379 (495)
T ss_pred CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH-----HHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcch
Confidence 5765444 6667888999999999999999954 33 3322 2223333333333333333333333333334
Q ss_pred HHhccccchhhhhhcccCcchh-HHHHHHHHHHHHHhccCCchhH
Q 014646 310 LVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+.....+.......+...++.| -+..+......+. ++.++|.+
T Consensus 380 ~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~~~~ 423 (495)
T KOG2533|consen 380 GLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGS-AGAISGQL 423 (495)
T ss_pred hhHHHHHHHHhhccccccchHHhHHHHhhhhcchhH-HHHhhhhh
Confidence 4444455556666666655433 3334444333444 33433433
No 49
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=1.7e-30 Score=244.05 Aligned_cols=350 Identities=11% Similarity=0.094 Sum_probs=218.3
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||++++.+.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++
T Consensus 66 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 145 (496)
T PRK03893 66 ISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKA 145 (496)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..+++.+++.+.+.++||+.|++..+.. +..++.....||.++...++++.+ .
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~-~-------------- 209 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI-IFALWLRKNLPEAEDWKEKHAGKA-P-------------- 209 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHHHHhCCCchhhhhhccccc-c--------------
Confidence 999999999999999999999999999999998754432 222222222344322110000000 0
Q ss_pred Cccccccchhhhhhhhhcccc-------cchhhhhhhhhh-------------hhh-H--hhhchhhHHHHHHHHHHHHH
Q 014646 162 NDHVSEDISDQASERSIKSIG-------ESRFLNQLSQFS-------------QDT-K--VLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-------------~~~-~--~l~~~~~~~~~~~~~~~~~~ 218 (421)
.++..+.....+......... ...........+ ..+ . ...+.+.........+....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (496)
T PRK03893 210 VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFL 289 (496)
T ss_pred chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHh
Confidence 000000000000000000000 000000000000 000 0 00011111111111111111
Q ss_pred HHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh--c
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S 295 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 295 (421)
.......++|.|+++..+.+..+. .+.....++.+++.++.+++.||+++| +.+..+..+..+..+..... .
T Consensus 290 ~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 364 (496)
T PRK03893 290 YSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGA 364 (496)
T ss_pred ccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhcccc
Confidence 122355788999987777776544 445667788899999999999999988 55555444444333322222 2
Q ss_pred hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
+.+.......+.++......+....++.+.+|++.|++++|+.+...+. |..++|.+.|.+.|..| +...+...+..
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~lgp~l~g~l~~~~g-~~~~~~~~~~~ 441 (496)
T PRK03893 365 NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-GGALAPILGALIAQRLD-LGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-HHHHHHHHHHHHhccCC-hHHHHHHHHHH
Confidence 2222222222223333334455677788989999999999999766665 88899999999999876 55555444433
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.98 E-value=2e-30 Score=234.88 Aligned_cols=331 Identities=14% Similarity=0.080 Sum_probs=227.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+.++++|+++||+|||++++++.++.+++++.++++.+. ++.|+++|++.+...|...+++.|++|+++|+++
T Consensus 49 l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a 125 (393)
T PRK11195 49 LAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKA 125 (393)
T ss_pred HHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 5678899999999999999999999999999999888777664 7799999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|.++||.+++.+.+. .|+..+.+.+...++. .+..+..||.+++.++++ .+..
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~-~~~~-------------- 188 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS-WNPI-------------- 188 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC-CCHH--------------
Confidence 9999999999999999999999885 4888887776554333 333444565322110000 0000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
...++..+..+.++++|.+........+............|.+.++..+.++..
T Consensus 189 --------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~ 242 (393)
T PRK11195 189 --------------------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQ 242 (393)
T ss_pred --------------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 000111223456677777665554444444445555666777888888887655
Q ss_pred HH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 MM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
.. ......++.+++.+..+++.||.+++ +.+..+.... .........++.+.......+.+++.+...++..+
T Consensus 243 ~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~ 316 (393)
T PRK11195 243 PAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNA 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 53 34566677888888888888877665 4444433332 22222233344444455555667777776777788
Q ss_pred hhhcccCcch-hHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhee
Q 014646 321 VCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIF 387 (421)
Q Consensus 321 ~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (421)
..++..|++. +|++.++.|...+. +..++..+.+.+ +..| .+..+++.....+....+.+.+++
T Consensus 317 ~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 317 LLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred HHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877655444 79999999877666 878888777755 4444 556666666665565555555543
No 51
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.98 E-value=8.6e-30 Score=228.49 Aligned_cols=321 Identities=13% Similarity=0.031 Sum_probs=236.9
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc-----chhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++.++.++.|++.||+|.|+++.++.+++++.++..+++ ++++.+++.|++.|++ +..++.....+++|+|++
T Consensus 81 l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~ 159 (462)
T PRK15034 81 VSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA 159 (462)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh
Confidence 4567888999999999999999999999999999999987 8999999999999998 668889999999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhh-----c-------------ccchhHHHHHhHHHHHHHHHHHHhccccccccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVG-----S-------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 138 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~-----~-------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 138 (421)
+||+++|+.....++|..+++++...+. + ..+||.+.++..++.++..++.++..++.+.
T Consensus 160 ~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-- 237 (462)
T PRK15034 160 KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-- 237 (462)
T ss_pred HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--
Confidence 9999999998777777776665554322 1 3358888888888877777777766433110
Q ss_pred CCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHH
Q 014646 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 218 (421)
++. . .++.+..+|+|..|.+.+.+++.+.
T Consensus 238 ----~~~-~----------------------------------------------~~~~~~vlk~~~~Wllslly~~tFG 266 (462)
T PRK15034 238 ----SRA-S----------------------------------------------IADQLPVLQRLHLWLLSLLYLATFG 266 (462)
T ss_pred ----ccc-C----------------------------------------------HHHHHHHhCCCchhHHHHHHHHHHH
Confidence 000 0 1235568899999999999999988
Q ss_pred HHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHH-HHhh---
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AFCL--- 294 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 294 (421)
.+.++..++|.|.++.+.... ......+..+...+.++++|+++||+|++ +.+........+.... ....
T Consensus 267 ~fvg~s~~lp~~~~~~~~~~~-~l~~~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 267 SFIGFSAGFAMLAKTQFPDVN-ILRLAFFGPFIGAIARSVGGAISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHcChHH-HHHHHHHHHHHHHHHHHhhHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999988663221 11223344577788899999999999998 6655554433333221 1111
Q ss_pred --chhHHHHHHHHHHHHHHhccccchhhhhhcccCc---------------------chhHHHHHHHHHHHHHhccCCch
Q 014646 295 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP---------------------SLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 295 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
.+.+...+.+....++.+......+-.+.+.+|+ ++.|.+.|+.. ....+|+++-|
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~-a~G~~Ggf~~p 419 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS-AIGAVGGFFIP 419 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH-HHHHcccchhh
Confidence 2344445555455566667777777777777763 15678888885 44445888889
Q ss_pred hHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 352 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 352 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+.|...+..|++...++.+....+++.++..
T Consensus 420 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 420 QAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888777666655443
No 52
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=1e-30 Score=245.18 Aligned_cols=343 Identities=14% Similarity=0.151 Sum_probs=246.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.++.|+++||+|||++++.+.++..++++++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 48 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 127 (485)
T TIGR00711 48 LANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRA 127 (485)
T ss_pred HHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhh-------cccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSE 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~ 154 (421)
++++..+..+|..++|.+++++.++++||+.|++.+.+.++..++.++..|++++.. .++.+..... ....
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~ 205 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLY 205 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887777766666666532211 1111100000 0000
Q ss_pred cccccCCCccccc-cchhh-h-------hhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 014646 155 GSEASNLNDHVSE-DISDQ-A-------SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 155 ~~~~~~~~~~~~~-~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
...+.+..+...+ ..... . .....+.+.+ +... ..+++++|.++...+..++.....+....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T TIGR00711 206 GLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDD--------NPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFY 276 (485)
T ss_pred HHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCC--------CCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 00000 0 0000000000 0011 12467888888888877888888888889
Q ss_pred HhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-h-h--chhHHH
Q 014646 226 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-C-L--SSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--~~~~~~ 300 (421)
+.|.|+++..+.++... .......++.+++.++.+++.||+++| +.+..+..+..+...... . . .+.+..
T Consensus 277 ~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 277 LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 99999999888886555 344566788899999999999999988 666555555554444433 1 1 233344
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.....+.+++.+...++......+.+|+++++++.|+.+...+. |+.+|+.+.+.+.++.
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQL-GGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 44556677777777777777788889999999999999777665 8889999999888753
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.98 E-value=6.3e-30 Score=232.78 Aligned_cols=301 Identities=15% Similarity=0.078 Sum_probs=209.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||++++.+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 49 ~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~ 128 (392)
T PRK10473 49 AGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKV 128 (392)
T ss_pred HHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.++..||+++.. ++++..
T Consensus 129 ~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~-------------- 191 (392)
T PRK10473 129 LSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR---APAASS-------------- 191 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc---cCCccc--------------
Confidence 999999999999999999999888889999999999888777777666666532110 000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..+..++.++++.++...+...+.......+..+.|.+.++..+.++..
T Consensus 192 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 240 (392)
T PRK10473 192 -------------------------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGE 240 (392)
T ss_pred -------------------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHH
Confidence 0012334456676665444444444444455667788888777877654
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.+++.||+++| +.+.....+.....+......+.+.......+...+.+...+..
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-- 313 (392)
T PRK10473 241 YAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA-- 313 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--
Confidence 4 344566788889999999999999988 66555554444444433333333333333333333333333222
Q ss_pred hhhcccCcchh-HHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 321 VCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 321 ~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
...+..|.++| +.+.++. +. +..+++.+.+++.+..|
T Consensus 314 ~~~~~~~~~~~~g~~~~~~----~~-~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 314 MSQALGPFSLRAGVASSTL----GI-AQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHhccCcccccHHHHHH----HH-HHHHHHHHHHHHHHHhc
Confidence 22333344333 3333333 22 55566778888888776
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.98 E-value=1.4e-29 Score=230.72 Aligned_cols=327 Identities=13% Similarity=0.170 Sum_probs=226.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhh---cc-cchhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS-SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
+++.+++++.|+++||+|||+++..+.++++++++++ ++ .++++.+++.|+++|++.+...+.....+.+++|+++
T Consensus 59 ~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~ 138 (402)
T TIGR00897 59 IAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN 138 (402)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH
Confidence 4678899999999999999999999999999887654 23 3578889999999999998888888888999999999
Q ss_pred chhHHHHHHhHHHHHh-HHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccc
Q 014646 78 KTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++|+.+.+.++|. +++|.+++.+.+..||+..++......++..++.+++.++.++ +++.+..
T Consensus 139 ~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--------- 205 (402)
T TIGR00897 139 LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT----PQHMQTR--------- 205 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC----cccccCC---------
Confidence 9999999999999997 6899999999888897766555544333333333443333111 0000000
Q ss_pred cccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc
Q 014646 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
+ +..+..+.++.++++|.++...+..++.....++..++.|.|.++ .+
T Consensus 206 ----------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g 253 (402)
T TIGR00897 206 ----------E---------------------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LG 253 (402)
T ss_pred ----------c---------------------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 0 000011235567889999888777777777788888999999866 67
Q ss_pred cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHH-HHHHHHHHH-HHHHH----hhchhHHHHHHHHHHHH
Q 014646 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAIS-CLTAF----CLSSLYGFLALFTVGEL 309 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~ 309 (421)
.+..+. .......+++.++.+..|+++||++|| +... .......+. ..+.. ..++.+...+...+.++
T Consensus 254 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~ 328 (402)
T TIGR00897 254 FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM-----NTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGI 328 (402)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Confidence 775444 334566788899999999999999987 3322 111111111 11111 11233444444555555
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
+.+.. .+......+ .++++|+++.|+.|...+. |..++|.+.|.+.|..| +...+++.+++.+++.++.
T Consensus 329 ~~~~~-~~~~~~~~~-~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 329 FLAGY-VPLAAVFPT-LAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHH-HHHHHHHHh-hCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHH
Confidence 55443 334444444 5677999999999877776 88899999999999877 5566676666655554443
No 55
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.3e-30 Score=238.39 Aligned_cols=334 Identities=16% Similarity=0.197 Sum_probs=229.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 63 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 142 (398)
T TIGR00895 63 IGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTA 142 (398)
T ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchh
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..+++.+++.+.+..+||+.|++.+++.++..++.+...||+++...++++++.. +..++......
T Consensus 143 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 219 (398)
T TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVR---RIVNAIAPQMQ 219 (398)
T ss_pred HhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHH---HHHHHHHHhcc
Confidence 999999999999999999999999999999999997776666666666667654321111000000 00000000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++ ++... ++..+. +..++..+..++..+.+..+...+..++..........+.|.+. +..+.++..
T Consensus 220 ~~~-~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 286 (398)
T TIGR00895 220 AEA-QSALP----EQKATQ-------GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSL 286 (398)
T ss_pred ccc-ccccc----cccccc-------chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHH
Confidence 000 00000 000000 00011111111111223334444444555566667778888544 445666443
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.+++.||+++| ..............++.....+.+......++.+++.+...+....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 287 AATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 445667788899999999999999986 4443333333333333332445555566666777777778888899
Q ss_pred hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
+..+.+|+++|+++.|+.+...+. |..++|.+.|++
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence 999999999999999999766665 888999888865
No 56
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=216.25 Aligned_cols=322 Identities=15% Similarity=0.110 Sum_probs=255.2
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhH---HHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW---SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.-++.|.+.||+|.|++..+++++..+-++..+++.+.+ ++++.+++.|++.+ .+.....++++|+||+++|.+
T Consensus 63 allRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~A 141 (417)
T COG2223 63 ALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLA 141 (417)
T ss_pred HHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHH
Confidence 45668899999999999999999999999999999886555 99999999999877 677889999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccc---hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+|+.. ..|+|..+...++..+....+ ||....+..+..++..++.++...+.+..+...++.+
T Consensus 142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~------------- 207 (417)
T COG2223 142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL------------- 207 (417)
T ss_pred HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc-------------
Confidence 99999 889999999999999988888 9999999988888888888877644332211111000
Q ss_pred cCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
...++.++++++.|.+.+.++.....+.++..++|.|++++++.+
T Consensus 208 -----------------------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~ 252 (417)
T COG2223 208 -----------------------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLS 252 (417)
T ss_pred -----------------------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 023667889999999999999999999999999999999999999
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-------chhHHHHHHHHHHHHH
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALFTVGELL 310 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 310 (421)
.... .+.....+.+.+.++++|+++||+|.+ +........+.++....... .+.......+.....+
T Consensus 253 ~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~ 327 (417)
T COG2223 253 PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVF 327 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHH
Confidence 7665 555667778888999999999999988 55555554444444333322 3445555556666777
Q ss_pred HhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+......+-.+...+ +++.|.+.|+.. ..+.+|+..-|...|...+.+|++...|+++..+.+++.+...
T Consensus 328 ~G~GnGsvfk~Ip~if-~~~~G~v~G~vg-a~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 328 AGLGNGSVFKMIPVIF-PKETGAVTGIVG-AIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred hccCcchheeechHHH-HhhhhHHHHHHH-HhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777777766 457888999985 4444588888999999999999888888888877766665543
No 57
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.3e-29 Score=230.74 Aligned_cols=317 Identities=15% Similarity=0.088 Sum_probs=218.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhh---cc-----cchhHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.++++++|+++||+||||+++.+.+...++.+.. +. .++++.+++.|+++|++.+...+...+++.|++
T Consensus 62 ~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 141 (392)
T PRK12382 62 LATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV 141 (392)
T ss_pred HHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4677889999999999999999999988877665432 22 357899999999999999998888889999999
Q ss_pred CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccc
Q 014646 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
|+++|++++++.+.+...|..++|++++.+.+.+|||+.+.+..+..++.. ...++.++. ++++++ .
T Consensus 142 ~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~-~------ 208 (392)
T PRK12382 142 GPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW----AFNGTVRKV--PAHAGE-R------ 208 (392)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH----HHHHhccCC--CCCccc-C------
Confidence 999999999999999999999999999999998999988776654332221 111211100 000000 0
Q ss_pred ccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014646 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
.+. .+..+.+.+ +. +...+..........+.|.|+++
T Consensus 209 ----------------------------------~~~---~~~~~~~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~ 245 (392)
T PRK12382 209 ----------------------------------PSL---WSVVGLIWK-PG-----LGLALQGVGFAVIGTFVSLYFAS 245 (392)
T ss_pred ----------------------------------chH---HHHHHHHHH-hH-----HHHHHHHHHHhHHHHHHHHHHHh
Confidence 000 001111111 11 11222334444556677777766
Q ss_pred hhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhc
Q 014646 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
. +.++.. .......++.+++.+..+++.||+++| +.+.....+..+........++.+...+...+.+++.+.
T Consensus 246 ~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 318 (392)
T PRK12382 246 K-GWAMAG-FTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSL 318 (392)
T ss_pred c-CCchhH-HHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh
Confidence 3 344322 223445566788899999999999987 555544444444444444445555555555666666666
Q ss_pred cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+.......+..|+++|+++.|+.+...+. |..++|.+.|++.|+.| |+..+.+.+.+.+++....+
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 319 IFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 6666777788889999999999999776666 88999999999999876 87888887776666555443
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2.9e-29 Score=227.53 Aligned_cols=302 Identities=16% Similarity=0.180 Sum_probs=218.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 37 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (377)
T PRK11102 37 LGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRM 116 (377)
T ss_pred HHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++..+..||.++.. ++++ .
T Consensus 117 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~-------------- 178 (377)
T PRK11102 117 MSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE---RRQP-F-------------- 178 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc---ccCC-C--------------
Confidence 999999999999999999999999889999999998887777666666656532110 0000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.++..+++++.+++|.++...+..++.......+..+.|.++.+..+.++..
T Consensus 179 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 179 ---------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred ---------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 00001134556778888777666666666666677777888888877877655
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHH---HHHHHh-hchhHHHHHHHHHHHHHHhcccc
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS---CLTAFC-LSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
. .......++.+++.++.+++.||+++| +.+.....+.... ...... ..+.+...+...+.....+....
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISS 306 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 4 344666788889999999999999988 5554444332221 111111 11223333333333333333344
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHH
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 354 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 354 (421)
.......+.. ++.++++.++.+.....+|..+++.+.
T Consensus 307 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 307 NAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556655 488999999987666555666666443
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=4.4e-29 Score=226.06 Aligned_cols=313 Identities=17% Similarity=0.185 Sum_probs=215.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+.....+.+..++++|+++
T Consensus 52 l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (381)
T PRK03633 52 TGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRL 131 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999998888888888889999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
++.+..+.++|..+|+.+++.+.+...|...+. .+........+.+...++. . +++++
T Consensus 132 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~---~~~~~---------------- 189 (381)
T PRK03633 132 LAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ--Q---AENHD---------------- 189 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC--C---CCCCC----------------
Confidence 999999999999999999999877543333332 2222111111111111110 0 00000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++.++.+++|.++......+...........++|.|.++. +.++..
T Consensus 190 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~ 236 (381)
T PRK03633 190 --------------------------------STSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDAS 236 (381)
T ss_pred --------------------------------CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHH
Confidence 01133455666666544434444445556667889988774 555433
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .+.....++.+++.+..+++.||+++| +.+........+..+... ... .......+.+.+.....+....
T Consensus 237 ~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~~-~~~~~~~l~g~~~~~~~p~~~~ 308 (381)
T PRK03633 237 IGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQVFVVILGSIAML--SQA-AMAPALFILGAAGFTLYPVAMA 308 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hhH-HHHHHHHHHHHHHHhHHHHHHH
Confidence 3 344566678889999999999999988 655544444444333322 111 1222333344444455677777
Q ss_pred hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
...+..|+++++.+.+..+...+. |..++|.+.|++.|+.+ +...|.+.+.+.++..
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHH
Confidence 788888888878788887655555 89999999999999876 6566776665554443
No 60
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=7.4e-29 Score=227.11 Aligned_cols=318 Identities=15% Similarity=0.163 Sum_probs=227.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhh---cccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+|+.+++++.|++.||+|||+++..+.++++++++++ .++++++.++++|+++|+|.+...+....++.|+.|+++|
T Consensus 72 ~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~ 151 (438)
T PRK10133 72 FGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSG 151 (438)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhH
Confidence 5788999999999999999999999999999999875 5789999999999999999999999999999998777777
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhc-c-------------------------cchhHHHHHhHHHHHHHHHHH-Hhcc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGS-H-------------------------LNWRYAFWGEAILMLPFAVLA-FVIK 131 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~-~-------------------------~gwr~~f~~~~~~~~~~~~~~-~~~~ 131 (421)
.+.+++.+....+|..+++.+++.+.. . .+||++|+....+..+..++. ....
T Consensus 152 ~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~ 231 (438)
T PRK10133 152 HFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF 231 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999876430 0 256666764443322222222 2222
Q ss_pred cccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHH
Q 014646 132 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 211 (421)
Q Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 211 (421)
||.++ ++++.. +..+..++.++++++|.++...+
T Consensus 232 p~~~~-----~~~~~~-----------------------------------------~~~~~~~~~~~ll~~~~~~~~~l 265 (438)
T PRK10133 232 PALQS-----DNHSDA-----------------------------------------KQGSFSASLSRLARIRHWRWAVL 265 (438)
T ss_pred CCCCc-----cccccc-----------------------------------------cccchhhhHHHHHhCchHHHHHH
Confidence 33110 000000 00001123557788888887777
Q ss_pred HHHHHHHHHHHHHHHhhhHH-HHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 212 GYIAYNFVIGAYSYWGPKAG-YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
..++......+...|.+.|+ ++..+.++... .......++.++++++++++.||+++| +.+.....+....++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 266 AQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-----KVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHH
Confidence 66777777777777888885 56678887655 344667788899999999999999998 666555555544444
Q ss_pred HHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhh
Q 014646 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 369 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 369 (421)
.....++. ..+..+.+.+++.+..+|..+....+..|+ +.+++.++.. ... .|+.++|.+.|.+.|..|+.+..++
T Consensus 341 ~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~-~g~~~~~~i~G~l~~~~g~~~~~~~ 416 (438)
T PRK10133 341 ISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTI-IGGGIVTPVMGFVSDAAGNIPTAEL 416 (438)
T ss_pred HHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHh-ccchHHHHHHHHHHHhccchHHHHH
Confidence 43333333 234556678888899999999999888754 5678888874 333 4778889999999997664445555
Q ss_pred HHHHH
Q 014646 370 ALTSI 374 (421)
Q Consensus 370 ~~~~~ 374 (421)
+...+
T Consensus 417 v~~~~ 421 (438)
T PRK10133 417 IPALC 421 (438)
T ss_pred HHHHH
Confidence 44333
No 61
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.1e-28 Score=228.99 Aligned_cols=325 Identities=14% Similarity=0.113 Sum_probs=229.3
Q ss_pred chhhHHHhhhhhc-----CchHH-HHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 6 VASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 ~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
++.+++|+++||+ ||||. ++.+.+..+++..++++. ++++.+.+.+++.|++.+...+...+++.|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5788999999999 99985 667777777777777665 47888999999999999999999999999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+|+++.++...+..+|.++++.++..+.+ ..|||..|++.+++.++..+..++ .||+++.. ++++..
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~---~~~~~~-------- 207 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTI---PVPKTL-------- 207 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccc---ccccch--------
Confidence 99999999999999999999999999988 579999999999877666554443 45532110 000000
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
+ +...++++++++++..+...+..++..........+.+.|+.+..
T Consensus 208 --------------~--------------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~ 253 (491)
T PRK11010 208 --------------E--------------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGV 253 (491)
T ss_pred --------------h--------------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 000123556666777666665555665666666677888887777
Q ss_pred ccchhhHHHH--hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHH---HHHHhh-chhHHHHHHHHHHHH
Q 014646 236 HMSNADMMFG--GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC---LTAFCL-SSLYGFLALFTVGEL 309 (421)
Q Consensus 236 ~~~~~~~~~~--~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~ 309 (421)
|.+..+.... ....++.+++.+++|+++||+++| +.+.....+..+.. ...... ++.+......++..+
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~ 328 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENL 328 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 8876555433 344578899999999999999987 44443333222221 111222 233333333344333
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+.+...+.......+..+++.+++..++.+...+. |..+++.+.|++.|..| |...|.+...+.+.+.+...
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV-GRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 44444455677788888888999999999777665 77777889999999876 77777777777666655554
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=7.5e-29 Score=222.84 Aligned_cols=302 Identities=21% Similarity=0.309 Sum_probs=253.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+.+..+.++..++.+...++++++.+++.|++.|++.+...+...+++.|++|+|+|++.
T Consensus 45 ~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (352)
T cd06174 45 LGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRA 124 (352)
T ss_pred HHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.+++.+++.++..+...+. |
T Consensus 125 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------------------- 174 (352)
T cd06174 125 LGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L----------------------------- 174 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H-----------------------------
Confidence 9999999999999999999999998899999999988776665554433 1
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
|.++...+..++..........+.|.+.++..+.+...
T Consensus 175 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
T cd06174 175 ------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE 212 (352)
T ss_pred ------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 33455566667777778888889999998876666544
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhh-HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchh
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .......++..++.++.+++.||+++| + .+..+..+..+........++.+...+...+.+++.+...+...
T Consensus 213 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 213 AGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHH
Confidence 4 445677788999999999999999998 6 66666666666666666666666677777788888888889999
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+..+..|+++|++.+|+.+...+. +..++|.+.+.+.|..+ +...+.+.+...+++.+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999766666 88999999999998655 7677777777666555443
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=2e-28 Score=222.52 Aligned_cols=321 Identities=9% Similarity=0.067 Sum_probs=209.2
Q ss_pred cccchhhHHHhhhhhcCchHHH-HHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc--h
Q 014646 3 GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--T 79 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~ 79 (421)
++.++.+++++ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+...|....++.|+.++++| +
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAV 142 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHH
Confidence 34455555555 9999999875 566677778888888999999887766555555556788888888888876655 3
Q ss_pred hHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
...++.+.+.++|.++||++++.+.+++|||..|++.++..++..+..++..||.++.++ ++++..
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------ 208 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELP--LATGTL------------ 208 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCc--cccccc------------
Confidence 455888999999999999999999998999999999998887777776666676432110 000000
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+..++ +++..+...............+..+.|.|+++..+.++
T Consensus 209 -----------------------------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~ 251 (393)
T PRK15011 209 -----------------------------------EAPRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPE 251 (393)
T ss_pred -----------------------------------ccccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 00000 01111222222233334445566789999988888876
Q ss_pred hhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... .+.....+..+++.++.|+++||+++| +.+.................++.+..+....+.+++.+...+..
T Consensus 252 ~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 252 KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 333444566778899999999999998 54444333333333332333444444444444444444444444
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+..+..| +.+++++++++...+. |..++|.+.|.+.|..| +...+.......+++....+
T Consensus 327 ~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 327 MLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHH
Confidence 555667665 5699999998777665 88999999999999876 76677666655555444443
No 64
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.7e-29 Score=229.82 Aligned_cols=377 Identities=14% Similarity=0.099 Sum_probs=274.0
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHH-HHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+..|+.+.+.||+|.|.+.+.|.++.+++.++.++++++|++++ .-++.|+|.|..+.....++..||++| |+.+.
T Consensus 94 ~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~ 172 (509)
T KOG2504|consen 94 YLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALAT 172 (509)
T ss_pred HHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHH
Confidence 3456889999999999999999999999999999999999998877 678899999999999999999888766 99999
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchh-hhcccccccccCC
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV-VASVSEGSEASNL 161 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 161 (421)
|+...+.++|.++-|.+...+.+.+|||+.+++.+.+.+-..+......|...+..++ ++++... ..+......+...
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 251 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRNSAASVESTPKPVEL 251 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhcccccccccccccccc
Confidence 9999999999999999999999999999999999999877777777777754433222 1000000 0000000000000
Q ss_pred Cccc-c-ccch--hhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcc
Q 014646 162 NDHV-S-EDIS--DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 162 ~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
.... . .... ........+.+.+............--.++++++.++...+...+...++.....++|.|..+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~ 331 (509)
T KOG2504|consen 252 RISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLS 331 (509)
T ss_pred ccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 0000 0 0000 0000000000000000000000001124778999999999999999999999999999999964444
Q ss_pred chhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccc
Q 014646 238 SNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
+.......++.++..++++++.|++.|+...+.. .....+.+..++..+......+.+.++....+.+++.+.....
T Consensus 332 ~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l 408 (509)
T KOG2504|consen 332 SNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSL 408 (509)
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 4444566688889999999999999999874321 4445566666666666666677777777778888888877776
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
...++.+.++.++-+.+.|+...+... +..+||++.|++.|..++|...|++++...+++...++...
T Consensus 409 ~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 409 TPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 677899999999999999999655555 88999999999999999999999999999888887776554
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=3.1e-28 Score=221.03 Aligned_cols=314 Identities=15% Similarity=0.150 Sum_probs=232.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcc---cchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+++.+++++.|++.||+|||+++.++.++++++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|
T Consensus 49 ~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~ 128 (410)
T TIGR00885 49 GGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTA 128 (410)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHH
Confidence 578899999999999999999999999999999988644 46899999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcc--------------------------cchhHHHHHhHHHHHHHHHHHHhc-c
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSH--------------------------LNWRYAFWGEAILMLPFAVLAFVI-K 131 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------------------------~gwr~~f~~~~~~~~~~~~~~~~~-~ 131 (421)
++.+++.+...++|..++|.+++.+... .+||++|++.+++.++..++..+. .
T Consensus 129 ~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~ 208 (410)
T TIGR00885 129 TRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKM 208 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998877422 369999999988776655444322 1
Q ss_pred cccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHH
Q 014646 132 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 211 (421)
Q Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 211 (421)
|+.++ +++++ . +..++.++++++|.++...+
T Consensus 209 p~~~~----~~~~~-~--------------------------------------------~~~~~~~~~~~~~~~~~~~l 239 (410)
T TIGR00885 209 PALNH----SDAKQ-I--------------------------------------------SFSASLSRLARIRHYREGVI 239 (410)
T ss_pred CCCCc----ccccc-c--------------------------------------------cchhhHHHHHhChhHHHHHH
Confidence 22100 00000 0 00012446678888888777
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhh-ccchh-hHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 212 GYIAYNFVIGAYSYWGPKAGYNIY-HMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
..+++.........+++.|.++.. +.+.. ...+......+..+|+++++++.||+++| +.+......+.+.++
T Consensus 240 ~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-----~~l~i~~~~~~~~~l 314 (410)
T TIGR00885 240 AQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-----KVLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHH
Confidence 777777777777888999987643 22221 12334445577789999999999999888 777666666666666
Q ss_pred HHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh-----hch
Q 014646 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-----NNW 364 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-----~~~ 364 (421)
+....++... ...+.+.+++.+..+|..++...+..+++.+..+.++. +. .+|+.+.|++.|++.|.. |++
T Consensus 315 l~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~--~~Gga~~p~l~G~~~d~~~~~~~~~~ 390 (410)
T TIGR00885 315 GSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MA--IIGGGIVPPLQGFIIDMKEIAAAPAV 390 (410)
T ss_pred HHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HH--HhccchHHHHHHHHHHHhcccccCcc
Confidence 6655554333 45566677778888899999999998776554455554 32 259999999999999964 345
Q ss_pred hhhhhHHHH
Q 014646 365 RKTTLALTS 373 (421)
Q Consensus 365 ~~~~~~~~~ 373 (421)
+..|++...
T Consensus 391 ~~~~~~~~~ 399 (410)
T TIGR00885 391 NTSFILPLL 399 (410)
T ss_pred chHHHHHHH
Confidence 556665433
No 66
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=2.8e-28 Score=222.66 Aligned_cols=300 Identities=19% Similarity=0.142 Sum_probs=216.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+..+..++.+++.++++++.+++.|+++|++.+...+...+++.|++|++++++.
T Consensus 52 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (401)
T PRK11043 52 AGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRV 131 (401)
T ss_pred HHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999888888888899999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
.+.......+|..++|.+++.+.+++|||+.|++.+++.++..++.++. ++++++ ++.+..
T Consensus 132 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~-------------- 192 (401)
T PRK11043 132 FATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL-KPSKKA----RKQSQD-------------- 192 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-CCCCCc----cccchH--------------
Confidence 9999999999999999999999999999999999988877766655544 322110 000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..++++++++|.++...+...+.......+..+.|.+.++ .+.++..
T Consensus 193 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~ 239 (401)
T PRK11043 193 --------------------------------ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPAD 239 (401)
T ss_pred --------------------------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHH
Confidence 1235566777777765555555555566677788888766 5666544
Q ss_pred HHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHH---HHHHHHHHHHHHh--hchhHHHHHHHHHHHHHHhccc
Q 014646 242 MMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA---TFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
... .....++.+++.++.+++.||++++ +..... ..++......... .++.+.......+.+++.+...
T Consensus 240 ~g~~~~~~~~~~~~g~~~~~~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (401)
T PRK11043 240 IGLSYVPQTIAFLVGGYGCRAALQKWGGE-----QLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIY 314 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 433 2444567788888899999999876 332221 1222221111111 2233334444555666666666
Q ss_pred cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
+.......+.. +++++++.|+.+..... ++..++.+.|.+.|.
T Consensus 315 ~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 315 PIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 66666666655 46799999999876555 666778888888774
No 67
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=8e-29 Score=254.26 Aligned_cols=323 Identities=13% Similarity=-0.028 Sum_probs=230.3
Q ss_pred ccccchhhHHHhhhhhcCchHHHHH---HHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+++++.++++|+++||+|||+++.. ..+...+..+.....++++.++++|+++|++.+...|+..+++.|++|+++|
T Consensus 63 l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~ 142 (1140)
T PRK06814 63 LPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDEL 142 (1140)
T ss_pred HHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcccc
Confidence 4677889999999999999997533 2233333333334458999999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
++++++.+++.++|.++||++++++.+..+|++.|...++..++. ++..+..|+.++... ..+.+.
T Consensus 143 ~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~------------ 208 (1140)
T PRK06814 143 LGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAP-DLKIDR------------ 208 (1140)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCC-CCeecc------------
Confidence 999999999999999999999999999999999995544444433 333344444321100 000000
Q ss_pred cCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
...++....++.+.+++.++...+..++..+....+..++|.|+++.++.+
T Consensus 209 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 209 -----------------------------NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred -----------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCc
Confidence 000111235677889999999888888887777888889999999988877
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--------------------hchh
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--------------------LSSL 297 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~ 297 (421)
+... .+.+...++.+++.++.+++.|+..++ +.+....++..+..+.+.. ..+.
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----LYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----eeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccccc
Confidence 6544 444677788899999999999876655 2222222222121111111 1445
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHH
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 373 (421)
+..++..++.+++.+...++..+++++..|++.+|+++|+.+..... +..+++.+.+.+.+...++...+++.+.
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 55556666677777777888899999999999999999999876655 8888998989888654444444444333
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=4.7e-28 Score=217.46 Aligned_cols=305 Identities=14% Similarity=0.048 Sum_probs=216.3
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.|++.+...+....++.|++| ++|+++
T Consensus 46 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~ 123 (355)
T TIGR00896 46 LCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLM 123 (355)
T ss_pred HHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHH
Confidence 5678899999999999999999999999988888887 78899999999999999999888888888999986 579999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhccc--chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
+++.+.+.++|..+++.+++.+.+.. +||+.|...+++.++... ...|+.+++ +++++..
T Consensus 124 ~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~------------ 185 (355)
T TIGR00896 124 TGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIPQVRRR---VAANQTT------------ 185 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhhhccc---cCCCCCC------------
Confidence 99999999999999999998887664 399999887765433221 223432211 0000000
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+ ....++++++|.++...+..++....+.....|+|.|+++ .+.+.
T Consensus 186 -------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~ 231 (355)
T TIGR00896 186 -------------------T--------------RLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASA 231 (355)
T ss_pred -------------------C--------------CCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 0 0113345677888776666666667777888899999987 46665
Q ss_pred hhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... .......++.++++++.+++.||+++|+ ..+.....+..+..+......+..... ...+.+++.+...+..
T Consensus 232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~ 306 (355)
T TIGR00896 232 ATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLA 306 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHH
Confidence 443 4456778889999999999999995441 444444444433333333333222222 3445566666666655
Q ss_pred hhhhhcccC-cchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhh
Q 014646 319 NYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 366 (421)
Q Consensus 319 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 366 (421)
.....+..+ ++.++...++.+...+. +..++|.+.|++.|+.|+|..
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 307 LTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccCC
Confidence 555555444 46778888988655555 778899999999999887643
No 69
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=6e-28 Score=222.06 Aligned_cols=329 Identities=17% Similarity=0.151 Sum_probs=250.6
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc-----chhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
...+.++++|.++||++|||+++.+.++.++..+..++. .+.+.+++.-++.|++.+...|...+++.|..|+++
T Consensus 57 P~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 57 PILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh
Confidence 456788999999999999999999998877665554432 478889999999999999999999999999999999
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
...++++.+...++..++||.++|.+...+|-.+.|.+.++..++.........|+..+. +..++
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~----~~~~e----------- 201 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS----SLPRE----------- 201 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc----ccchh-----------
Confidence 999999999999999999999999999988999999999876665544444332221100 00000
Q ss_pred ccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcc
Q 014646 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
...++..+.++.+.++|.+....+..++.+.....+...+|.+.++..+.
T Consensus 202 ------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~ 251 (524)
T PF05977_consen 202 ------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGG 251 (524)
T ss_pred ------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCC
Confidence 11123345667777788777666656666666666667789999988887
Q ss_pred chhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhcccc
Q 014646 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
++... .+.+..++++++|.++.+++.+|++++ +++..+.+..+...+.+...++.+...+.+++.|++......
T Consensus 252 ~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~ 326 (524)
T PF05977_consen 252 GASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANS 326 (524)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 76555 344677788888888888888877766 666666666666666666677777777778888888888888
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
...+..++..|++.||++++++++.... +..+|..+.|.+.|..| ....+.+.++..+++.++..
T Consensus 327 ~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 327 SLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999766666 77889999999999887 44566655555444444443
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=5.2e-28 Score=220.40 Aligned_cols=303 Identities=13% Similarity=0.065 Sum_probs=218.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+..+..++.+.+.++++++.+++.|++.|++.+...+....+..|.+++++++++
T Consensus 54 ~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (394)
T PRK11652 54 LTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHA 133 (394)
T ss_pred HHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999988888888889999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|.+++.+.+..|||+.|++.++..++..++..+..||+++.. +++ .
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~-------------- 194 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD----ARR-T-------------- 194 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cch-h--------------
Confidence 999999999999999999999999889999999998877766655555556532110 000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+..+++++.+++|.++...+..+........+..+.+.++++..+.++..
T Consensus 195 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 244 (394)
T PRK11652 195 ------------------------------RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMT 244 (394)
T ss_pred ------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHH
Confidence 00134566778888776665555555555555667788888877777544
Q ss_pred H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHH-HHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHHhccccc
Q 014646 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
. .......++.+++..+.+++.||.+++ .... ............... ..+.+.......+.+++.+...+.
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 319 (394)
T PRK11652 245 VSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPL 319 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3 233444566666777777777777632 2221 222222222222111 123344455556666777777777
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
......+..| ++++++.++.+..... |..+++.+.+.+.+.
T Consensus 320 ~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 320 ATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 7887888775 6789999999766665 888888888877654
No 71
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=1.9e-28 Score=222.25 Aligned_cols=314 Identities=16% Similarity=0.088 Sum_probs=222.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||++++++.++..++.++.+++++++.+++.|++.|.+.+...+...++..|.+|+++|+++
T Consensus 54 ~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (395)
T PRK10054 54 TIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKI 133 (395)
T ss_pred HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHH
Confidence 35677899999999999999999999999999999999999999999999999988888888889999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.....++|.+++|.+++.+.+ .+|+..|++.++..++..++..+..|++++. ++++..
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~~~~~~-------------- 194 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA----IATETG-------------- 194 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----cccchh--------------
Confidence 999999999999999999999875 6999999998887766655555544543211 000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc--h
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS--N 239 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 239 (421)
+ ..+.++.+++|.++...+..++.......+..+.+.|..+..+.+ .
T Consensus 195 --------------------------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (395)
T PRK10054 195 --------------------------S-----VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAE 243 (395)
T ss_pred --------------------------h-----hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHH
Confidence 0 001245668888877776666666665555566677665433322 2
Q ss_pred hhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh-hchhHHHHHHHHHHHHHHhccccc
Q 014646 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
... .+.....+.........+++.||.++| +.+.....+..+....... .++.+.+.+...+.+++.....+.
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 244 KVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred HHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 222 222333344445556778888988877 5555554444444433332 234444455556666666666666
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHH
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 373 (421)
....+.+..|++.++++.+..+ ..+. |..+||.+.|.+.|+.| +...+...+.
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~~~~~ 371 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFVILAL 371 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHHHHHH
Confidence 6778888889999999988764 4444 88999999999999886 4344444333
No 72
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.9e-28 Score=229.36 Aligned_cols=384 Identities=14% Similarity=0.159 Sum_probs=247.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|.+++++++|+++|++|||+.++++.+++.++++++++++|+++++++|+++|+|.|......+.+++|..|++.||..
T Consensus 100 lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l 179 (513)
T KOG0254|consen 100 LGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTL 179 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcc-cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
.+..+....+|..++..++....+. .+||..+.+..+++++..+. .++.||++++..+. .+....+.....+....
T Consensus 180 ~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~--g~~~~a~~~l~~l~g~~ 256 (513)
T KOG0254|consen 180 VSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEK--GRLEEAKRSLKRLRGLS 256 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHc--CChHHHHHHHHHHhCCC
Confidence 9999999999999997666665443 58999999999999888888 77779988875432 11111111112222211
Q ss_pred CCccccccchhhh-hhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 161 LNDHVSEDISDQA-SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+++...+..+.. .........+.+ ..+.+... ...+++.+....+..+.+..+.+...+|.+.+++..+..+.
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~---~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~ 330 (513)
T KOG0254|consen 257 -PEDVEVELELLKIKLLVEAEVAEGK--ASWGELFS---PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD 330 (513)
T ss_pred -CcchHHHHHHHHHHHHHhhhccccc--ccHHHhcC---cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc
Confidence 111111111111 000000000000 00001111 11223334444444455555567777888888777665544
Q ss_pred hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh------------chhHHHHHHHHHH
Q 014646 240 ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------------SSLYGFLALFTVG 307 (421)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 307 (421)
. .....+..+..+++.+++.++.||+||| +.++.+.....++.++.... ...+..++..++.
T Consensus 331 ~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (513)
T KOG0254|consen 331 T-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLF 404 (513)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHH
Confidence 3 3444566777888888889999999998 77666555555444333211 1123334444444
Q ss_pred HHHHhccccchhh-hhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 308 ELLVFATQAPVNY-VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 308 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
.......+.+..+ +..|.+|.+.|+++.++.....+.....+ ......+.+..+ ....+........+.... ++..
T Consensus 405 v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~-fv~~ 481 (513)
T KOG0254|consen 405 IFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGGICLLSLII-FVFF 481 (513)
T ss_pred HHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHHHHHHHHHH-HheE
Confidence 4555556666655 56777888999999999977777755555 444445544433 123444444443333331 2233
Q ss_pred eeec-ccccccccccccc
Q 014646 387 FLKS-IDKFNEDGENQIS 403 (421)
Q Consensus 387 ~~~~-~~~~~~~~~~~~~ 403 (421)
..|| |+++.++.++...
T Consensus 482 ~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 482 FVPETKGLTLEEINELFE 499 (513)
T ss_pred EcccCCCCcHHHHHHHHH
Confidence 5565 7888777666544
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=7.3e-28 Score=217.95 Aligned_cols=317 Identities=12% Similarity=-0.005 Sum_probs=233.2
Q ss_pred cccchhhHHHhhhhhcCchHHH----HHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 3 GLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+..++++++|+++||+|||... ..+..+..+ ..+..+++++.+++.|+++|.+.+...|...++..++ +++|
T Consensus 51 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~ 126 (382)
T TIGR00902 51 ARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQF 126 (382)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHc
Confidence 4567889999999999985433 333322222 2445788999999999999999988888888887665 4678
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+++++......++|.+++|++++.+.+++|||..|++.++..+ ..++.+...|+.++.. +++++..
T Consensus 127 ~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~----------- 192 (382)
T TIGR00902 127 GLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIPPKD--AIPEDES----------- 192 (382)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCCCCc--ccccccc-----------
Confidence 9999999999999999999999999999999999988765532 2222333222211100 0000000
Q ss_pred cCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
+..++.++++|+|+++...+..++.......+..+.|.|+++ .+.+
T Consensus 193 ---------------------------------~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s 238 (382)
T TIGR00902 193 ---------------------------------QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGIS 238 (382)
T ss_pred ---------------------------------ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
Confidence 001235677899999998888888888888888899999987 6666
Q ss_pred hhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccc
Q 014646 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
+... ....+..+..+++..+.+++.||+++| +.+..+.+...+........++.+..+....+.++..+...+.
T Consensus 239 ~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 239 ASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5444 333556677788888889999999988 7777777777777666666777777777888888888888888
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
...++.+. |+++++++.++++.....+|..++|.+.|++.|+.| + ..+...+.+.+.+.
T Consensus 314 ~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 314 AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHH
Confidence 88888887 888999999998765555688999999999999986 4 45666555555443
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=5.1e-28 Score=249.39 Aligned_cols=312 Identities=13% Similarity=0.018 Sum_probs=224.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++++++++++|+++||+|||++++++.++..++.++.. .+++++.+++.|+++|++.+...++..+++.|++|+++|
T Consensus 58 l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 137 (1146)
T PRK08633 58 LPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENL 137 (1146)
T ss_pred HHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccc
Confidence 56788999999999999999999998877666555443 457899999999999999999999999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcc---------cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhh
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 149 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (421)
++++++.+.+.++|.++|+.+++++.+. .+|++.+.+..+...+..++..+..|+.++.....++.+..
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKY-- 215 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccccccc--
Confidence 9999999999999999999999998865 23555555544443334444444445543221100000000
Q ss_pred hcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014646 150 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
...++....++.+++++.++...+..++..........++|.
T Consensus 216 --------------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (1146)
T PRK08633 216 --------------------------------------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPA 257 (1146)
T ss_pred --------------------------------------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 000112234667788888888777777766667777788999
Q ss_pred HHHHhhccchh-hH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 014646 230 AGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 307 (421)
Q Consensus 230 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (421)
|+.+..+.+.. .. .+.....++.+++.++.+++.||++++ +.+..+.++.++..+......+.+..++..++.
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99988888755 33 444666778888999999999998876 444444444444444444445555566666677
Q ss_pred HHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 308 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+++.+...++...++.+..|++.|++++|+.+...+. |.++++.+.+.+..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 7777777777888889999999999999999766665 76666655554443
No 75
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=3.1e-28 Score=230.90 Aligned_cols=336 Identities=21% Similarity=0.314 Sum_probs=240.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc---------------------------------------
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--------------------------------------- 42 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------------------------------------- 42 (421)
+|++++.++.|+++||+|||+++.++.++++++++++++.+
T Consensus 79 i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 158 (633)
T TIGR00805 79 IGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQC 158 (633)
T ss_pred HHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCcccccc
Confidence 57889999999999999999999999999999999988763
Q ss_pred ------------hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhccc---
Q 014646 43 ------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--- 107 (421)
Q Consensus 43 ------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--- 107 (421)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++.+..+|.++|+++++++.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~ 238 (633)
T TIGR00805 159 PSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDT 238 (633)
T ss_pred ccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhccccc
Confidence 25567889999999999999999999999999999999999999999999999999999887543
Q ss_pred -------------------chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCcccccc
Q 014646 108 -------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 168 (421)
Q Consensus 108 -------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (421)
+|+..|++.+++.++.++..+ ..|+..+.....++.+.... + ..+ .
T Consensus 239 ~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~~~~~~~~~~-~---~~~---~------- 303 (633)
T TIGR00805 239 GSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGKRVNVDVHET-E---KLE---K------- 303 (633)
T ss_pred ccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCcccccchhhhhh-h---ccc---c-------
Confidence 278889999888877766544 44554322110000000000 0 000 0
Q ss_pred chhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHH-hh
Q 014646 169 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GV 247 (421)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 247 (421)
.+.+.. .......++..+.++.+++||.++...+..++.....+++.+|+|.|+++.++.++....+. ..
T Consensus 304 --~~~~~~-------~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~ 374 (633)
T TIGR00805 304 --SEDKSR-------KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGV 374 (633)
T ss_pred --cccccc-------hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhh
Confidence 000000 00001123344567889999999999999999999999999999999999999987655333 33
Q ss_pred HhH-HHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH---------------------------Hh------
Q 014646 248 TIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---------------------------FC------ 293 (421)
Q Consensus 248 ~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~------ 293 (421)
..+ +.+++.+++|+++||++.+.+...+......++..+..... ..
T Consensus 375 ~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~ 454 (633)
T TIGR00805 375 VNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCS 454 (633)
T ss_pred hhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCC
Confidence 333 56789999999999998654322222222222221111100 00
Q ss_pred --h--------------------------------------------------c-------h-hHHHHHHHHHHHHHHhc
Q 014646 294 --L--------------------------------------------------S-------S-LYGFLALFTVGELLVFA 313 (421)
Q Consensus 294 --~--------------------------------------------------~-------~-~~~~~~~~~~~~~~~~~ 313 (421)
. . + ...+++++++..+..+.
T Consensus 455 C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~ 534 (633)
T TIGR00805 455 CDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFI 534 (633)
T ss_pred CCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHh
Confidence 0 0 0 12234444455556667
Q ss_pred cccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
...+...++.+.+|+++|+.+.|+.....+.+|.+-+|+++|++.|..
T Consensus 535 ~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 535 TAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred ccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 777888899999999999999999999999999999999999999864
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=9.2e-28 Score=216.89 Aligned_cols=300 Identities=16% Similarity=0.129 Sum_probs=206.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchh
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
+++++++++.|+++||+|||+++.++.++..++.+++++++ +++.+++.|+++|++.+. .+....++.|++|+++|++
T Consensus 48 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~ 126 (366)
T TIGR00886 48 LAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGT 126 (366)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhH
Confidence 56789999999999999999999999999999999999999 999999999999998664 4567889999999999999
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhc----------ccchhHHH-HHhHHHHHHHHHHHHhcccccccccCCcccccchhh
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 149 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~----------~~gwr~~f-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (421)
++++.....++|..+++.+++.+.. +.+||+.| +..+++..+..++.+...||.++..+ ++++..
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 202 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKP--ATGKLS-- 202 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccc--cchhcc--
Confidence 9999998888888888777766553 34899999 44465555555555555455432210 000000
Q ss_pred hcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014646 150 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
. ... ... . ++ +..+..++.+++|.++...+..++..........+.|.
T Consensus 203 -~-------~~~----~~~--~-------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
T TIGR00886 203 -F-------KGA----RWS--V-------GT-----------GALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAM 250 (366)
T ss_pred -c-------ccc----ccc--c-------cc-----------hhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 000 0 00 00112445667888887777766666667778889999
Q ss_pred HHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHH-HHHH-hhc--hhHHHHHHH
Q 014646 230 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-LTAF-CLS--SLYGFLALF 304 (421)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~--~~~~~~~~~ 304 (421)
|+++.++.++... .+..+..+.++++.++.+++.||+++| +............. ++.. ... +.+......
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLF 325 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHH
Confidence 9999888776554 345666778889999999999999987 33333322222222 2222 222 344444444
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHH
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
.+...+.+...+.......+..| +++++++|+.+...+.
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 326 VALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccC
Confidence 55555666666666777777664 7999999998655443
No 77
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=1.3e-33 Score=261.91 Aligned_cols=372 Identities=19% Similarity=0.221 Sum_probs=238.2
Q ss_pred CccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc---hhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 1 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 1 ~lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++|..+|++++|+++||+|||+.+.++.++..+++++.++++ +++.+.++|+++|++.|...+....++.|..|+++
T Consensus 56 ~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~ 135 (451)
T PF00083_consen 56 FIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH 135 (451)
T ss_pred Hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 468899999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhhccc---chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
|++..++.+.+..+|.+++..++..+.... +||..+.+..+++++..+.. ++.||+|++...+++.+ +.++..+
T Consensus 136 R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~--~A~~~l~ 212 (451)
T PF00083_consen 136 RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDE--EAEKVLR 212 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceeccccccc--ccccccc
Confidence 999999999999999999988876554433 49999999998887655544 55699998865443332 2222222
Q ss_pred cccccCCCcc-ccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhh-----HHHHHHHHHHHHHHHHHHHHHhh
Q 014646 155 GSEASNLNDH-VSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFVIGAYSYWGP 228 (421)
Q Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (421)
+.+..+..++ .++..++.++.++.+ ..++++++++. +....+..+....+.+....+.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 277 (451)
T PF00083_consen 213 KLRGKEIEDEEIEEIKAEKKESQESK---------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSP 277 (451)
T ss_pred cccccccccccccccccccccccccc---------------eeeeecccccccccccccccccccccccccccccccccc
Confidence 2222211111 111111111110000 12333444322 22222212222223344455666
Q ss_pred hHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-----hhch----hHH
Q 014646 229 KAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLSS----LYG 299 (421)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~ 299 (421)
.+.++. +.+.. ........+...++.+++.++.||+||| +.+..+.....++.+.+. ..++ ...
T Consensus 278 ~i~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 278 SIFENA-GISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccc-ccccc-cccccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccc
Confidence 665553 33332 2233444566677788888999999998 666555554444433331 1112 122
Q ss_pred HHHHHHHHHHHHhccc-cchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHH
Q 014646 300 FLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 378 (421)
.+....+...+.+... +....+..|.+|++.|+++.++.+...+. ++++++.+.+.+.+..+.+ ..+.+.+.+.++.
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVFLIFAGVCLIA 428 (451)
T ss_pred cceeeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc-ccchhhHHHHHHH
Confidence 2223333333333333 34456779999999999999999766665 7788888888888876523 3444444443333
Q ss_pred HHHhhhheeeec-ccccccccccc
Q 014646 379 AGIWFVGIFLKS-IDKFNEDGENQ 401 (421)
Q Consensus 379 ~~~~~~~~~~~~-~~~~~~~~~~~ 401 (421)
.+ +...+.|| |+++.+|.++.
T Consensus 429 ~i--~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 429 II--FVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred Hh--heeEEEeeCCCCCHHHHHhh
Confidence 32 22335676 77787776653
No 78
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=5.4e-27 Score=221.03 Aligned_cols=336 Identities=15% Similarity=0.162 Sum_probs=221.4
Q ss_pred CccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchh
Q 014646 1 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 1 ~lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
++|.++|++++|+++||+|||++++.++++..++.+..++++|++.+++.|+++|++.++.......++.|++++++|+.
T Consensus 128 ~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~ 207 (521)
T KOG0255|consen 128 FLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGL 207 (521)
T ss_pred HHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+.++ ......+..++++.++++.. +||+.+++..+++++..++ +++.||++++...+.+.+.. .+..++..+.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a--~~~l~~~a~~n 281 (521)
T KOG0255|consen 208 ALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEA--IKILKKIAKLN 281 (521)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHH--HHHHHHHHhhc
Confidence 9999 77777888888888888877 7999999999988777666 55557988875443333211 11111111111
Q ss_pred -CCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 161 -LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
...+..+..+.......... ...+....+.++++.|++....+...+..+. ....++.-.+..+..+.+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~y~gl~~~~~~lg~~~ 352 (521)
T KOG0255|consen 282 GRKLSVKELLRLELLLRPLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-FSLVYYGLSLNVSGLGGNI 352 (521)
T ss_pred CCCCCcHHHHHHHHHhhHhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHH-HhHHHHhhhhhhhhcCchH
Confidence 00000111111100000000 0000012355666666444333322222211 1222222222222233331
Q ss_pred hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch-h--HHHHHHHHHHHHHHhcccc
Q 014646 240 ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-L--YGFLALFTVGELLVFATQA 316 (421)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~ 316 (421)
.....+.......+....+...|+.||| ........+..++++....... . +...+...+..++.+..+.
T Consensus 353 --~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
T KOG0255|consen 353 --YLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFN 425 (521)
T ss_pred --HHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Confidence 1222333345666677778999999988 6666666666666555544432 2 2455566666677777777
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
..+.+..|.+|+..|..+.+..+..... +.+++|.+.-....
T Consensus 426 ~~~~~~~el~pt~~r~~~~~~~~~~~~~-~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 426 LIFLYSAELIPTVVRNTAVGAISAAARL-GSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 7899999999999999999999655555 88888866543333
No 79
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=7e-27 Score=194.58 Aligned_cols=363 Identities=14% Similarity=0.112 Sum_probs=239.7
Q ss_pred CccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchh
Q 014646 1 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 1 ~lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
+.|+.+++..+|.++|++|||+.+.+..+...+...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|..
T Consensus 123 ~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~ 201 (528)
T KOG0253|consen 123 FLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWL 201 (528)
T ss_pred HhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCc
Confidence 368899999999999999999999999999999999999999999999999999999998 8889999999999998988
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccc-ccchhhhccccccccc
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES-GKAQVVASVSEGSEAS 159 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 159 (421)
.+-.. ..+.+|.++...++-.+..++||||.....+.+..+.+.. .+..||+++..-.+.+ .+....-++..+.+..
T Consensus 202 ~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~ 279 (528)
T KOG0253|consen 202 LTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYESPRFYLAKGDDYKALETLHKIARMNGK 279 (528)
T ss_pred chhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccCcchhhhcCChHHHHHHHHHHHHhcCC
Confidence 77777 9999999999999999999999999999988665555544 4445888876432221 1111111111111111
Q ss_pred CCCc-cccccch-----hhhhhhhhcccccchhhhhhhhhhhhhHhhhc----hhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014646 160 NLND-HVSEDIS-----DQASERSIKSIGESRFLNQLSQFSQDTKVLLQ----EKVYVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 160 ~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
+-.- ....... ++.+-++.+.+..+ +...+..+++. +..+.. ...++...+.+++.......
T Consensus 280 qlplgvl~~s~~~~~e~e~~~~~~~~~~a~k-------e~rg~~~nLlsp~lrkttlll-w~iwfgnafsyyg~VLltte 351 (528)
T KOG0253|consen 280 QLPLGVLESSAIDRQEQEESDLDDSKSSAAK-------EVRGGTTNLLSPKLRKTTLLL-WRIWFGNAFSYYGSVLLTTE 351 (528)
T ss_pred CCCcceeeeehhhhhhhhhhchhhhhhcccc-------ccccchHhhcChHHHHHHHHH-HHHHHhhHHHHHHHHHHHHH
Confidence 1110 0000000 00000111111111 11112223322 222211 11233333444444433333
Q ss_pred HHHHhh-----------------c---cchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 230 AGYNIY-----------------H---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 230 ~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
..+... + .+.....-..+..+..+.|.++.++++||+||| +.+....++++++.+
T Consensus 352 lfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----kTMal~l~~f~iflf 426 (528)
T KOG0253|consen 352 LFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLF 426 (528)
T ss_pred HHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHH
Confidence 222211 0 111112223456678899999999999999999 888888888888887
Q ss_pred HHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhh
Q 014646 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 369 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 369 (421)
+..............+..-++..+.+...+.+..|.+|+..|+++.|....+.++ |+++.|++. ...+..- + .+..
T Consensus 427 ll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI-ggI~~p~iA-~~~e~s~-s-l~i~ 502 (528)
T KOG0253|consen 427 LLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI-GGIFSPVIA-MRAELST-S-LPIF 502 (528)
T ss_pred HHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhh-hhhhhhHHH-HHhccce-e-ehHH
Confidence 7776666656666777778888888999999999999999999999999655555 999999776 4444322 3 4444
Q ss_pred HHHHHHHHHHHHhh
Q 014646 370 ALTSIFFLAAGIWF 383 (421)
Q Consensus 370 ~~~~~~~~~~~~~~ 383 (421)
+.+.+++++.+...
T Consensus 503 vy~~~~ilagIavc 516 (528)
T KOG0253|consen 503 VYGALFILAGIAVC 516 (528)
T ss_pred HHHHHHHHHHHHhe
Confidence 55555555554444
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=1.7e-26 Score=209.15 Aligned_cols=314 Identities=13% Similarity=0.040 Sum_probs=218.2
Q ss_pred ccccchhhHHHhhhhhcCch----HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 2 VGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++..++++++|+++||+||| +.+.++..+. .......+++++.+++.|++.|++.+...|...+++.++ +++
T Consensus 50 l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~ 125 (382)
T PRK11128 50 VARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ 125 (382)
T ss_pred HHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh
Confidence 35677899999999999994 3333332222 223344568899999999999999998888888887776 345
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
|+++++......++|.++||++++++.+++|||..|++.++..++..+ ..+..||..+. ++++..
T Consensus 126 ~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~---------- 190 (382)
T PRK11128 126 IGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIMPQ----GESRQQ---------- 190 (382)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCCCc----cccccc----------
Confidence 888889999999999999999999999999999999988765444333 33333432110 000000
Q ss_pred ccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcc
Q 014646 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
. ++..+++++++|+|.++...+..++..........+.|.|.++ .+.
T Consensus 191 --------------------~------------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~ 237 (382)
T PRK11128 191 --------------------E------------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGY 237 (382)
T ss_pred --------------------c------------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCC
Confidence 0 0001246678899999988777777777777777888888866 566
Q ss_pred chhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhcccc
Q 014646 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
++... .+..+..+..++..++.+++.||++++ +.+..+.....+..+.....++.+..++..++.+++.+...+
T Consensus 238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 64433 333455667778888899999999887 666666665555555555556666666667777777776666
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHH
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 375 (421)
....+..+. +++++++..+..+...+..|..++|.+.|.+.|..|. ..++..+.+.
T Consensus 313 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~~~~~~~~~~ 368 (382)
T PRK11128 313 AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--GVFWVMALVA 368 (382)
T ss_pred HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHH
Confidence 666666665 6667788899886555555778899999999998873 3444444443
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=4.6e-26 Score=207.75 Aligned_cols=318 Identities=15% Similarity=0.107 Sum_probs=207.6
Q ss_pred chhhHHHhhhhhc-----CchH-HHHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 6 VASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 ~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+..+++|+++||+ |||| ++.++.++.+++....++. ++++.+++..++.++..+...+...+++.|++|++
T Consensus 47 ~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 126 (402)
T PRK11902 47 IFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE 126 (402)
T ss_pred HHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5789999999999 8876 7888888888777777776 45788888888889889989999999999999999
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhcc-cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+|+++.++...+..+|.++++.++..+.+. .|||..|++.+++.++..+.. +..||+++.. ++++..
T Consensus 127 ~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~---~~~~~~-------- 194 (402)
T PRK11902 127 ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEVPA---RPPRSL-------- 194 (402)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccc---cccchh--------
Confidence 999999999999999999999999998885 599999999988776554433 3345422110 000000
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
.++..+++++++++|.++...+..++..........+.+.++.+..
T Consensus 195 ----------------------------------~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~ 240 (402)
T PRK11902 195 ----------------------------------GEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGA 240 (402)
T ss_pred ----------------------------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 0001234667889998887776666655544333344555666667
Q ss_pred ccchhhHHHH-hh-HhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH---HHHhh-chhHHHHHHHHH---
Q 014646 236 HMSNADMMFG-GV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCL-SSLYGFLALFTV--- 306 (421)
Q Consensus 236 ~~~~~~~~~~-~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~--- 306 (421)
+.++....+. .. ...+.+++.++++++.||+++| +.+.....+..+..+ ..... ++.+.......+
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL 315 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 7776554333 22 2345788999999999999987 544433333332221 11222 333433333322
Q ss_pred -HHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 307 -GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
.++..+........++.+..|.+++ +..+...+. +...++.+.|.+.|..| +...|...+.+.+.+..
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQY----ALLSALASV-GRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHH
Confidence 2333334444455556665555444 444333323 55445568999999987 66666666555544433
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.2e-27 Score=201.60 Aligned_cols=325 Identities=15% Similarity=0.075 Sum_probs=237.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCC-CchhHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP-QKTAWL 82 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~~ 82 (421)
+.+.+++.|.+.||+|+|..+++|++....+++++++.++++.++++|.+||+|.++..+...++++|.+|++ +|++++
T Consensus 119 qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vm 198 (464)
T KOG3764|consen 119 QLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVM 198 (464)
T ss_pred HHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHH
Confidence 4677899999999999999999999999999999999999999999999999999999999999999999975 589999
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCC
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN 162 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (421)
|+.-.+.++|..+||++||.+.+..|.+.+|++.+++.++-..+.+++.+.+... +++.++
T Consensus 199 GialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~---~~~~~~---------------- 259 (464)
T KOG3764|consen 199 GIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD---PDSTEQ---------------- 259 (464)
T ss_pred HHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC---cccccc----------------
Confidence 9999999999999999999999999999999999999999888888877432111 100000
Q ss_pred ccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH
Q 014646 163 DHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM 242 (421)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (421)
-.++++++++|.++.........+.......--++.+..+....+....
T Consensus 260 -------------------------------~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~ 308 (464)
T KOG3764|consen 260 -------------------------------GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV 308 (464)
T ss_pred -------------------------------CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcce
Confidence 0246788899998887766555555555555566677777776443333
Q ss_pred HHH-hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHH---HHHHHHHHHhccccch
Q 014646 243 MFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA---LFTVGELLVFATQAPV 318 (421)
Q Consensus 243 ~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 318 (421)
.+. ....+...++..+.|.+.||+++.+ |.....+.+..+..+......++....++ ..++.+........+.
T Consensus 309 G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 309 GLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred eeeecccccchhccCchHHHHHHhcCchh---HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 333 3345777899999999999999541 13333444444444434444444433333 3333333333444455
Q ss_pred hhhhhcccCcc---hhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 319 NYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 319 ~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+..|....+ ..|...++....... |.++||.+.|.+.+..| +.+.....+...+.-.-++.
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHH
Confidence 55555554444 667888888655555 99999999999999988 66666666655555444443
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=5.1e-26 Score=204.45 Aligned_cols=284 Identities=13% Similarity=0.090 Sum_probs=206.6
Q ss_pred hhHHHhhhhhc-----CchHH-HHHHHHHHHHHHhhhccc---chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 8 SPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 8 ~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
.+++|+++||+ ||||. ++.+.++.++.....++. .+++.+....++.+++.+...+...+++.|++|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 88999999998 89997 567777887777777777 4666677788888988888899999999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcccc--------hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhh
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA 150 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 150 (421)
+++.++...+.++|.++++.+++.+.+..+ ||..|++.++..++..+..++..||..+. ++++ + .
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~--~~~~-~-~--- 190 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED--ASVP-K-P--- 190 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc--cccc-h-h---
Confidence 999999999999999999999999988888 99999999987777655555444542111 0000 0 0
Q ss_pred cccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhh---HHHHHHHHHHHHHHHHHHHHHh
Q 014646 151 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
+ .++..+.+++++++|. ++...+..++.....+....+.
T Consensus 191 ---------------------~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (356)
T TIGR00901 191 ---------------------L-----------------TQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT 232 (356)
T ss_pred ---------------------H-----------------HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001124556666664 6666666666777777888899
Q ss_pred hhHHHHhhccchhhHH-HHhh-HhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-----------
Q 014646 228 PKAGYNIYHMSNADMM-FGGV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----------- 294 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 294 (421)
|.|+++ .+.+..+.. .... ..+..+++.++++++.||+++| +.+....++..+........
T Consensus 233 ~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 233 TLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-----YALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----HHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 999988 777755543 2232 3356788999999999999987 55554444444433322221
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHH
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 342 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (421)
++.+......++.+++.+...+....+..+..|+++|++..|+.+...
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 223444445556677777888889999999999999999999986544
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=1.9e-26 Score=211.62 Aligned_cols=332 Identities=16% Similarity=0.064 Sum_probs=204.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhc---ccchhH-HHHHHHHHhhhhhhhhcccccccccccCC--C
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFW-SIAICRMLVGVGEASFISLAAPFIDDNAP--V 75 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~ 75 (421)
+++.++++++|+++||+|||++++++..+.+++..... .++... ......++.++..+.........+.++.+ .
T Consensus 57 l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (420)
T PRK09528 57 LFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS 136 (420)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH
Confidence 46778999999999999999999887666655433211 111111 01112222233333233232233333332 2
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+++++.++......++|..++|.+++.+.+. +|++.|++.+++.++..++.++..|+.++.. +..++. +
T Consensus 137 ~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~---- 205 (420)
T PRK09528 137 RRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTA---KVANAL---G---- 205 (420)
T ss_pred hhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchh---hhccch---h----
Confidence 4567788999999999999999999998764 8999999988877766666555544321110 000000 0
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
++++ +...++.+..+|+|.++...+........+.....+.|.|+.+..
T Consensus 206 --------------------~~~~-----------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 254 (420)
T PRK09528 206 --------------------ANAS-----------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF 254 (420)
T ss_pred --------------------cccc-----------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000123445677887766555544444445555556777766554
Q ss_pred c---cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 014646 236 H---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 236 ~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+ .+.... ....+..+...++.++.+++.||+++| +.+.....+..+...+....++.+.......+.+...
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 329 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEV 329 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 2 222222 333555667788999999999999998 6665555555555444444556665555555555555
Q ss_pred hccccchhhhhhcccCcchhHHHHHH-HHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.........+..+..|++.+++..+. .+...+ +|.+++|.+.|++.|..| |+..+...+.+.++...+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 330 PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ-LGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHHHcCccceeeeeeehHHHHHH-HHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHH
Confidence 55555566777888899988887765 444444 488999999999999876 7788887776655554443
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=4e-26 Score=211.13 Aligned_cols=309 Identities=14% Similarity=0.121 Sum_probs=217.8
Q ss_pred cccchhhHHHhhhhh----cCchH-HHHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhcccccccccc
Q 014646 3 GLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 3 g~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ ...+++.+++.+++.+...+...++..|
T Consensus 47 ~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 126 (437)
T TIGR00792 47 LDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPA 126 (437)
T ss_pred HHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCccc
Confidence 467889999999998 67744 677888888888887776654 4566778889999998888888889999
Q ss_pred cC-CCCCchhHHHHHHhHHHHHhHHHHHHHHHhh-------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccc
Q 014646 72 NA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 143 (421)
Q Consensus 72 ~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 143 (421)
.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||+.+.+.+++.++..++.++..||.++.. +++
T Consensus 127 ~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~--~~~ 204 (437)
T TIGR00792 127 ITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI--PKN 204 (437)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC--Ccc
Confidence 87 4688999999999999998887776655544 2468999999999888777776666656532110 000
Q ss_pred ccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHH
Q 014646 144 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 223 (421)
++. ..+..+.++.++++|.++...+..++........
T Consensus 205 ~~~-------------------------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 205 IEK-------------------------------------------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred ccc-------------------------------------------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 0011234677889999988877777776666666
Q ss_pred HHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-chhHHHHH
Q 014646 224 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-SSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 302 (421)
..+.+.|.+...+.+.....+..+..++.+++.++.+++.||+|+| +.+..+..+..+..+..... ++.+...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T TIGR00792 242 NGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGGILLMVLGYLIFFFAGSNLPLILV 316 (437)
T ss_pred cchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 6666666655555333333444556788899999999999999988 66655555544444433332 34444455
Q ss_pred HHHHHHHHHhccccchhhhhhcccC-------cchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
..++.+++.+...+...++..|..+ ++.+|.+.|+.+..... |..+++.+.|.+.+..|
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 317 LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 5566666666666667777777654 45689999999776666 88899999999988765
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=9.3e-26 Score=205.76 Aligned_cols=325 Identities=11% Similarity=0.023 Sum_probs=214.4
Q ss_pred ccccchhhHHHhhhhhcCc-hHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhccccccccc--------cc
Q 014646 2 VGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID--------DN 72 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~ 72 (421)
++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+.+.|++.|++.+...+...++.. |.
T Consensus 49 ~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~ 128 (418)
T TIGR00889 49 IAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDV 128 (418)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCc
Confidence 4678899999999999965 77889999999899988899999999999999999987766665544421 22
Q ss_pred CCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcc
Q 014646 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 152 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 152 (421)
.....|.|.+| .+|.+++|.+++.+.....|+ +|++.++..++..++ .+..||.++.. ++++..
T Consensus 129 ~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~---~~~~~~----- 192 (418)
T TIGR00889 129 VTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAK---STAKMS----- 192 (418)
T ss_pred hhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCc---cccccC-----
Confidence 23233445555 468888898888774333354 466666665555443 33446542110 000000
Q ss_pred cccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 014646 153 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
.. +....+.+.++|+|.++...+..++..........+.|.+.+
T Consensus 193 ----------------~~--------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (418)
T TIGR00889 193 ----------------IK--------------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLH 236 (418)
T ss_pred ----------------HH--------------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 00 000012345678888877777766666655566677788877
Q ss_pred Hhhccc-------hhh-HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc-h---hHHH
Q 014646 233 NIYHMS-------NAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-S---LYGF 300 (421)
Q Consensus 233 ~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ 300 (421)
+.+..+ ... .....+..+..+++.+..+++.||+|+| +.+..+.++..+......... + .+..
T Consensus 237 ~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l 311 (418)
T TIGR00889 237 EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLSLVAWALRFGFFAYGDPEYFGYALL 311 (418)
T ss_pred HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcCcchhhHHHH
Confidence 643221 111 2334556677788899999999999998 777666666655544333322 1 2333
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc-----hhhhhhHHHHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-----WRKTTLALTSIF 375 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-----~~~~~~~~~~~~ 375 (421)
++..++.+.+.+...+....++.+.+|++.|++++|+.+...+.+|.++||.+.|++.|+.|+ |+..|.+.+++.
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~ 391 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYI 391 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHH
Confidence 444555666666666667788899999999999999996555555889999999999998753 667777766665
Q ss_pred HHHHHHhh
Q 014646 376 FLAAGIWF 383 (421)
Q Consensus 376 ~~~~~~~~ 383 (421)
+++.++..
T Consensus 392 ~i~~~l~~ 399 (418)
T TIGR00889 392 AILAVLFM 399 (418)
T ss_pred HHHHHHHH
Confidence 55544443
No 87
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=190.56 Aligned_cols=306 Identities=17% Similarity=0.139 Sum_probs=246.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
.||.+.+++.|++.+|+|+|+.++.|+.++++++.+.. ...++..++++-++.|.|.+...++...++....++++.
T Consensus 59 ~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a 138 (422)
T COG0738 59 GGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESA 138 (422)
T ss_pred HHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhH
Confidence 57899999999999999999999999999999999984 667899999999999999999999999999999999889
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhcc-------------------cchhHHHHHhHHHHHHHHHHHHhcc-ccccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSH-------------------LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGF 138 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------------------~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~ 138 (421)
.+.+++.+..+++|.+++|++++.+..+ -.||++|...+...++..+...... |+..+..
T Consensus 139 ~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~ 218 (422)
T COG0738 139 AFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA 218 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc
Confidence 9999999999999999999999888752 2488889888877666655555443 3321110
Q ss_pred CCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHH
Q 014646 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 218 (421)
+++.+.. .....+++++|.++...+..+++..
T Consensus 219 --~~~~~~~----------------------------------------------~~~~~~l~~~~~~~~gvl~~FlYVG 250 (422)
T COG0738 219 --PSLGASG----------------------------------------------SAGLSSLFQNKHLRLGVLAIFLYVG 250 (422)
T ss_pred --ccccccc----------------------------------------------cchHHHHHhChHHHHHHHHHHHHHh
Confidence 0000000 0135678899999999999999999
Q ss_pred HHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchh
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
.......|++.|+.+..+.++.+. .+.+..+.+.++|++++.++.+|+... +.+....++..+.++.....++.
T Consensus 251 ~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~-----k~Laf~a~~~ill~~~~~l~~g~ 325 (422)
T COG0738 251 AEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE-----KYLAFYALIAILLLLAVALIGGV 325 (422)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHhcCh
Confidence 999999999999999877776555 556788899999999999999999887 77777777777777666666664
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 364 (421)
.. +....+.+++.+..+|...+...+..| ++...+.++. .+..+|+++-|++.|++.|..|..
T Consensus 326 v~-~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l--~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 326 VA-LYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL--VMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred HH-HHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee--eeheecchHHHHHHHHHHHhhhhH
Confidence 43 445566788888999999999999998 6555566654 445568888999999999998743
No 88
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7.9e-28 Score=206.31 Aligned_cols=376 Identities=16% Similarity=0.153 Sum_probs=240.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccch-------hHHHHHHHHHhhhhhhhhcccccccccccCC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-------FWSIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
+|.++||++.|+++||+|||+++...+++..+++++++++.. ..++...|+++|+|.|+-+|.+.+..+|...
T Consensus 95 vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an 174 (538)
T KOG0252|consen 95 VGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESAN 174 (538)
T ss_pred HHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhh
Confidence 688999999999999999999999999999999998887632 5678899999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHHHHhHHHHHHHHHhhcc---------------cchhHHHHHhHHHHHHHHHHHHhcccccccccC
Q 014646 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 139 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 139 (421)
++.||...+...+..+.|...|.+++-.+..- .=||..|.+.+++++..... -+..||+.+...
T Consensus 175 ~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~a 253 (538)
T KOG0252|consen 175 KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYTA 253 (538)
T ss_pred hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHHH
Confidence 99999999999888888888888777655410 13999999888766443322 223377665431
Q ss_pred CcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHH
Q 014646 140 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 219 (421)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 219 (421)
..++.......+ ..+....+++++...+. .. .+..+....+.+.+... .-+.+...+..++.....
T Consensus 254 l~~~~~~~a~~d---------~~k~~~~~~~~~~~~~~-~~---~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 254 LVSKKLKQAAGD---------MKKVLSVDIEAESTAES-DV---PPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred HhhcCHhhhhhc---------cccccccccchhhcccc-CC---CCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhh
Confidence 111110000000 00000001111111000 00 00001111111111111 224556667778888888
Q ss_pred HHHHHHHhhhHHHHhhccchhh--------H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHH
Q 014646 220 IGAYSYWGPKAGYNIYHMSNAD--------M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 290 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
++....+....+++..-.+... + .-..+.....++|..+...++|++||+ +..+..+++..+..+.
T Consensus 320 fy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~ 394 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFV 394 (538)
T ss_pred hhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHH
Confidence 8888888877776533222111 1 111223344455777788899999998 6666666666666555
Q ss_pred HHhhch----hHHHHHHHHHHHHHHh-ccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh-----h
Q 014646 291 AFCLSS----LYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----H 360 (421)
Q Consensus 291 ~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~ 360 (421)
+....+ .....++..+..++.. +-......+.+|.+|.+.|++..|+. ...+-+|++++...+.++.+ .
T Consensus 395 ~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIs-AA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 395 IAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGIS-AASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred HcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHH-HHhccchHHHHHHHhhHhhhccCCcc
Confidence 544333 2334444455444443 44555566777888889999999999 55555699999999999888 4
Q ss_pred hhchhhhhhHHHHHHHHHHHHhhhheeeec-cccccccccccc
Q 014646 361 VNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQI 402 (421)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 402 (421)
.+ .+..+++.+.+...+.+..+ .+|| +++..++.+++.
T Consensus 474 ~g-~~~v~~i~~~~~~~gi~~T~---l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 474 IG-VRNVFIILAGCMLLGILFTL---LIPETKGKSLEEISNEE 512 (538)
T ss_pred cc-chHHHHHHHHHHHHhHheeE---EeecccccCHHHhcChh
Confidence 33 66778887777777766655 3344 777777665443
No 89
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1.6e-25 Score=203.95 Aligned_cols=329 Identities=13% Similarity=0.065 Sum_probs=213.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhh---cccc-----hhHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSF-----DFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.+++++.|+++||+|||+.++.+....+++.... .+.+ .+..+++.|++.|++.+...+....+..|..
T Consensus 49 l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 128 (396)
T TIGR00882 49 LFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS 128 (396)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh
Confidence 4577899999999999999999988777665544322 1222 2334566788889888888887777776643
Q ss_pred CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccc
Q 014646 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
+ ++++.++......++|.+++|.+++.+.+ .+||.+|++.+++.++..++.+...|+.+++ ++.+.. .
T Consensus 129 ~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~-- 196 (396)
T TIGR00882 129 R--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS----ATVANA---L-- 196 (396)
T ss_pred h--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh----hhhhcc---c--
Confidence 2 34567788888889999999999998865 5999999999888877766655544432111 000000 0
Q ss_pred ccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 014646 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
+ .+ ++ +...++.++++|+|.++...+..++....+.....+.|.|+++
T Consensus 197 -~-----------------~~---~~-----------~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~ 244 (396)
T TIGR00882 197 -G-----------------AN---AS-----------AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTS 244 (396)
T ss_pred -c-----------------cc---cC-----------CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00 0001235677888888776666555555566666677888776
Q ss_pred hhc---cchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 014646 234 IYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 234 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
..+ .+.... ....+..+...++.+..+++.||+++| +.+.....+.++........++.+.......+.+.
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~ 319 (396)
T TIGR00882 245 FFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVRIIGSSFATTALEVVILKMLHAF 319 (396)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 552 222222 233455667777888999999999998 66655555555444444445555555555555555
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHH-HHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHH
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (421)
+..........+..+..+++.++++.+. .+.... +|+.++|.+.|++.|..| +...|.+.+++.++....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~-lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ-LAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH-HHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 5444333444456666777777777666 444444 488999999999999876 777888777665554443
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=2e-26 Score=193.08 Aligned_cols=342 Identities=13% Similarity=0.034 Sum_probs=207.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+.++.+|.++||+|||+++++++...++...+.+++.|+..+++.|++.|+..| ...+..++++|.+++|+|++.
T Consensus 79 ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ 157 (451)
T KOG2615|consen 79 ILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAIISDVVSEKYRPLG 157 (451)
T ss_pred HHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHHHhhcChhhccce
Confidence 4678899999999999999999999999999999999999999777778999999998 556788999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhc---ccchhHHHHHhHHHHHHH----HHHHHhcccccccccCCcccccchhhhcccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGEAILMLPF----AVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~---~~gwr~~f~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
++......++|.++||.+|+++.. ..| +.+|.....+..+. .....++.||+.+.++..+++...
T Consensus 158 ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~------- 229 (451)
T KOG2615|consen 158 MSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTL------- 229 (451)
T ss_pred eeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccch-------
Confidence 999999999999999999999987 222 22233322222222 222333458876543222111100
Q ss_pred cccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Q 014646 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
++...++.+..+.+. .......++.+..........+.+..+.+...+....++.+.+..+.
T Consensus 230 -----------~~~~~~~~~~~~~~~-------~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~r 291 (451)
T KOG2615|consen 230 -----------QEAADDRLALLKFAR-------IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGR 291 (451)
T ss_pred -----------hhhhhhhhhhcchhh-------hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCc
Confidence 000000000000000 00000000111100111222333444555555555556566565666
Q ss_pred hccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhcc
Q 014646 235 YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFAT 314 (421)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (421)
+++++.+... +....++.+.++.+.+..+..+........+.....++.-..++...............+..+.....
T Consensus 292 fg~ss~~~G~--vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 292 FGYSSMQQGK--VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred cCCChhhhee--eeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 7777544321 22233444445555555555443211112233333333333444444445555566666666777777
Q ss_pred ccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHH
Q 014646 315 QAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 373 (421)
.+....+.....|+++||+.+|+....... +-++||.+.|.+..+...-+.++...+.
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEecCCCceeeehHH
Confidence 777888888889999999999999655554 9999999988887765433344443333
No 91
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=1.6e-25 Score=196.98 Aligned_cols=327 Identities=10% Similarity=0.017 Sum_probs=223.4
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.+|++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|+++|... +...++..|+|+++|+++
T Consensus 73 ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ra 151 (511)
T TIGR00806 73 YSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRA 151 (511)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhH--HHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA--ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.++..++..+|.++++++++. ...+|||+.+.+.- +.+...++++-+++|...+..--.++++.. .....+.+..
T Consensus 152 tsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~--~~~~~~~~~~ 228 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVR--GALPCELDQM 228 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccc--cccccccccC
Confidence 999999999999999999999 45679997665542 233344444455556322211000000000 0000000000
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
...+. . +.. ...+.......+..+.+++...+||.+....+-+.+...+++.+.+|....-++....++
T Consensus 229 ~~~~~---------~-~~~-~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~ 297 (511)
T TIGR00806 229 VPGPG---------G-KLE-DYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLN 297 (511)
T ss_pred CCCCc---------c-ccc-hhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCcc
Confidence 00000 0 000 000011113345667778888899999888888888888888888877776655533221
Q ss_pred -hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 240 -ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.....-++..+.+.+.++..|++-.++.+. ....+.+..++.+..++++...++.|...+...+.........+..
T Consensus 298 ~yNG~veA~~tllga~~a~~ag~~~~~w~~~---~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia 374 (511)
T TIGR00806 298 KYNGAVDAASTLLGAITSFIAGFVNIRWARW---SKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIA 374 (511)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCchhh---HHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 111222444556667777888874444221 0133445555556666677777899988888888888888887777
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhc
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFG 346 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g 346 (421)
..-++.....+.-|...|++++..-.+-
T Consensus 375 ~~~iA~~L~~~~~aLvFGiNtfvAl~LQ 402 (511)
T TIGR00806 375 TFQIASSLSKELCALVFGINTFVATALK 402 (511)
T ss_pred HHHHHHHhcccceEEEEecHHHHHHHHH
Confidence 8888888877888999999865544433
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=1.7e-24 Score=200.07 Aligned_cols=343 Identities=13% Similarity=0.054 Sum_probs=203.9
Q ss_pred chhhHHHhhhhh-cCchHHHHHHHHHHHHHHhhhcccchhHH-HHHHHHHhhhhhhhhcccccccccccCCCC--CchhH
Q 014646 6 VASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVGEASFISLAAPFIDDNAPVP--QKTAW 81 (421)
Q Consensus 6 ~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~ 81 (421)
+..+++|+++|| +||||+++++.++++++++.++++++... ++++|+++|+|.|...|...+++.|.+|++ +|+++
T Consensus 65 ~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~ 144 (489)
T PRK10207 65 GLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA 144 (489)
T ss_pred HHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence 456789999999 99999999999999999999999887554 557999999999999999999999999877 45779
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccC-CcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++++.+.++|..+||.+++++.+++|||+.|++.++ +++..++.+...++..++.+ ++++.+.+...........
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~-- 221 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS-- 221 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH--
Confidence 9999999999999999999999999999999999755 44444444444443322211 1101000000000000000
Q ss_pred CCccccccchhhhhhhhhcccccchhh-------hhhhhhhhhhHhhhchhhHHHHHHH--HHHHHHHHHHHHHHhhhHH
Q 014646 161 LNDHVSEDISDQASERSIKSIGESRFL-------NQLSQFSQDTKVLLQEKVYVVNVLG--YIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (421)
..-...-....+........... .-..+. ....+.+|+|.+....+. .......+....+.++.+.
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~ 296 (489)
T PRK10207 222 ----VVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFA 296 (489)
T ss_pred ----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 00000000000000000000000 000000 001134455554433322 2333333444445666666
Q ss_pred HHhhcc-----chhhHHHHhhHhHHHHHHHhHHHHHHHhhccccc--chhhHHHHHHHHHHHHHHHH-----Hhh-----
Q 014646 232 YNIYHM-----SNADMMFGGVTIVCGIVGTISGGFILDQMGATIS--NAFKLLSAATFLGAISCLTA-----FCL----- 294 (421)
Q Consensus 232 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~----- 294 (421)
++..+. ......+..+..+..++..++.+++.||+++|.. +....+..+.++..+..+.+ ...
T Consensus 297 ~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~ 376 (489)
T PRK10207 297 INNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGL 376 (489)
T ss_pred HHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 643222 2122233334445566777778899999988732 11112333333333222211 111
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+.+..+....+.+.+.....++....+.+..|++.++.++|+.+...+. |+.++..+....
T Consensus 377 ~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i-g~~lg~~l~~~~ 438 (489)
T PRK10207 377 TSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA-AFLLGGYVATFT 438 (489)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 23455666777788888889999999999999999999999999766555 777766555433
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.93 E-value=6.1e-24 Score=196.44 Aligned_cols=374 Identities=11% Similarity=0.025 Sum_probs=219.7
Q ss_pred ccccchhhHHHhhhhh-cCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCC---
Q 014646 2 VGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ--- 77 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--- 77 (421)
+++.++++++|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.|++.|...+...++++|++|+++
T Consensus 59 ~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~ 138 (475)
T TIGR00924 59 ALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR 138 (475)
T ss_pred HHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc
Confidence 3567889999999999 899999999999999999999999999999999999999999999999999999998764
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
|++++++++.+.++|.++||.+++++.+++|||+.|++.++..++.. +.++..++..++.++++++... ++......
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 215 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLRDIGSVPDPLSG--QGKTYGKL 215 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccccCCCCCCCcch--hhhhhHHH
Confidence 88899999999999999999999999998999999999886554443 3333333322111100000000 00000000
Q ss_pred ccCCCccccccchhhhhhhhhcccccch-------hh---hhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 014646 158 ASNLNDHVSEDISDQASERSIKSIGESR-------FL---NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
...................+........ .. ....+...+..+-.|...+..+.+...++...+....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l 295 (475)
T TIGR00924 216 LLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSL 295 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0000000000000000000000000000 00 0000000000011122233444444445555555556667
Q ss_pred hhHHHHhhccch-----hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhH--HHHHHHHHHHHHHHHHh-------
Q 014646 228 PKAGYNIYHMSN-----ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL--LSAATFLGAISCLTAFC------- 293 (421)
Q Consensus 228 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------- 293 (421)
+.+.++..+.+. ....+.++..+.-++..++..++..|..||....... +..+.++.++++.....
T Consensus 296 ~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~ 375 (475)
T TIGR00924 296 NFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADA 375 (475)
T ss_pred HHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 776665433321 1223444555555555555444444555431111111 23444444444333321
Q ss_pred --hchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHH
Q 014646 294 --LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 371 (421)
..+.+..+....+.+.+.....+....+..+..|++.|++.+|+....... |..+++.+.....+..+ +...+...
T Consensus 376 ~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~-g~~l~~~~~~~~~~~~~-~~~~~~~~ 453 (475)
T TIGR00924 376 GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM-GSLLGGYLATFGAVPQG-VTGVFGKI 453 (475)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccc-hhhHHHHH
Confidence 246667777888888999899999999999999999999999999655544 88888777776655433 44444444
Q ss_pred HHHHHHHHH
Q 014646 372 TSIFFLAAG 380 (421)
Q Consensus 372 ~~~~~~~~~ 380 (421)
+..+++..+
T Consensus 454 ~~~~~~~~~ 462 (475)
T TIGR00924 454 GLVTLLVGV 462 (475)
T ss_pred HHHHHHHHH
Confidence 444443333
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.93 E-value=1e-23 Score=193.35 Aligned_cols=344 Identities=12% Similarity=0.071 Sum_probs=216.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.++..++.|+++|.||||.+++.+.++..+|+++++.++|...++.+..+.|+|.|... .....++|..|.|.|+..
T Consensus 89 l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~ 167 (599)
T PF06609_consen 89 LASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLG 167 (599)
T ss_pred HHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhH
Confidence 4567888999999999999999999999999999999999999999999999999987665 455668999999999888
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc-ccccccccCCcccccchhhhccc-------
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVS------- 153 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~------- 153 (421)
.++.....-+....++.++..+..+.+|||.|++..+...+..++.+++ .|.+.+..+.++..++...++.+
T Consensus 168 ~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~ 247 (599)
T PF06609_consen 168 LAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLF 247 (599)
T ss_pred hHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHH
Confidence 8877776666666788888877777799999999998876665554433 34322111111110100000000
Q ss_pred --------cccc------ccCCCccccccchhhhhhhhhcccccchhhhh---hhhhhhhhHhhhch-hhHHHHHHHHHH
Q 014646 154 --------EGSE------ASNLNDHVSEDISDQASERSIKSIGESRFLNQ---LSQFSQDTKVLLQE-KVYVVNVLGYIA 215 (421)
Q Consensus 154 --------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~-~~~~~~~~~~~~ 215 (421)
-.+. ....+......+.-.--.-. ---.++. .++... ..+++++ |.+...++..++
T Consensus 248 ~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv-----~F~~wE~~~~~~~Pl~-P~~Lf~~~r~~~~~lvi~fi 321 (599)
T PF06609_consen 248 IAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV-----AFVVWEWFGAPKDPLF-PHRLFKDRRGFAALLVISFI 321 (599)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH-----HHHHhhhhccCCCCcC-CHHHhccchHHHHHHHHHHH
Confidence 0000 00000000000000000000 0000000 011112 2356776 556666666677
Q ss_pred HHHHHHHHHHHhhhHHHHhhccchh----hHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH
Q 014646 216 YNFVIGAYSYWGPKAGYNIYHMSNA----DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 291 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (421)
....++....+.|......++.++. ..........+..++.++.+.+..+++|-+ ..++.+..+..+.+..+
T Consensus 322 ~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K----w~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 322 SGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIK----WQLIFGSVLMTAFCGAM 397 (599)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchh----HHHHHHHHHHHHHHHHH
Confidence 7777788888888887777766542 223445566777788888899988886542 33333343333332222
Q ss_pred --HhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 292 --FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.-.++....+.+..+.+++.+....+.....+-..|+++.+++.|+. ...+.+|+.+|..+..-+
T Consensus 398 a~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~-~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 398 AAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLT-GSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHH-HHHHHHhhHHHHHHHHHH
Confidence 22334445566677778888777777777777788999999999999 555555777776665443
No 95
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=175.65 Aligned_cols=322 Identities=13% Similarity=0.053 Sum_probs=243.2
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+...+.+++..+++.|+|.++.+..++++.+++.++-... +.+.++.+-.+.|.|.+......+.+|.+.+|+| -+..
T Consensus 58 l~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~m 135 (395)
T COG2807 58 LAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLM 135 (395)
T ss_pred HHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhH
Confidence 3456788999999999999999999999999999998887 7888889999999999999999999999999976 8999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhccc-chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++|....++|..+++.+...+.++. |||......+.++++..+.++ |...+.+....+.+
T Consensus 136 tglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~~~~~~~~~--------------- 197 (395)
T COG2807 136 TGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALREQAASIATK--------------- 197 (395)
T ss_pred HhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhcccccccccccc---------------
Confidence 99999999999999999999998877 799999999988877665554 44222110011100
Q ss_pred CCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh
Q 014646 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
..+...++|+|.-|.+.+.+.+++..++....|+|.++.|.+-.++.
T Consensus 198 ---------------------------------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~ 244 (395)
T COG2807 198 ---------------------------------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE 244 (395)
T ss_pred ---------------------------------cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 01233578999999999999999999999999999999986544444
Q ss_pred hHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhh
Q 014646 241 DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
+..+.++..+.+++.++....+.+|...++ ........+..+..+.+.+.+....+.. ..+.|++.+..++....
T Consensus 245 aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~ 319 (395)
T COG2807 245 AGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALT 319 (395)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHH
Confidence 446667788899999999999999854432 4444444444333333323332222222 46677777777777777
Q ss_pred hhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 321 VCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 321 ~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+.+...+ +..+.-+|+.+...+.++ ..||.++|++.|..|+|...+.......+.....-
T Consensus 320 li~~rs~~a~~Aa~LSgmaQg~GYllA-a~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 320 LILLRSSDAAIAAALSGMAQGVGYLLA-AFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HHHhhcCChHHHHHHHHHhhhhhHHHH-hhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 77766554 677777788877777755 56999999999999999888777766655444443
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=9.9e-23 Score=185.29 Aligned_cols=316 Identities=11% Similarity=-0.029 Sum_probs=206.7
Q ss_pred chhhHH-HhhhhhcCchHHHHHHHHHH-HHHHhh---hcccch-hHHHHHHHHHhhhhhhhhcccccccccccCCCCCch
Q 014646 6 VASPIF-ASLAKSHNPFRLIGVGLSVW-TFATAG---CGSSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 6 ~~~~~~-g~l~dr~Grr~~l~~~~~~~-~~~~~~---~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
+.+|++ ++..||+||||..++.+.+. ...... .....+ ...++..-++.++..+...+...++..|..++++++
T Consensus 53 l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~ 132 (390)
T TIGR02718 53 LWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLA 132 (390)
T ss_pred HHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhh
Confidence 445556 44678889999865555332 211211 112322 334444556666777777888888888999888889
Q ss_pred hHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccccc
Q 014646 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
...+....+..+|.++|+...+++.+++|||..|++.+++.++..+..++..|+.+++ +++++ .
T Consensus 133 ~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~-~------------ 196 (390)
T TIGR02718 133 KGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVAS---PEAPL-A------------ 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCc---cccch-h------------
Confidence 8899999999999999999999999999999999999988877666655554331110 00000 0
Q ss_pred CCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch
Q 014646 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
...++++++|+|.++......++..........+.+.|++| .+.++
T Consensus 197 ---------------------------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~ 242 (390)
T TIGR02718 197 ---------------------------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPL 242 (390)
T ss_pred ---------------------------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCH
Confidence 01235667788888777776777777677777788888887 57776
Q ss_pred hhHHHH-hhHh-HHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh------hchhHHHHHHHHHHHHHH
Q 014646 240 ADMMFG-GVTI-VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC------LSSLYGFLALFTVGELLV 311 (421)
Q Consensus 240 ~~~~~~-~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 311 (421)
...... .... ...+++.++.|++.||++++ +.+.....+.....+.... ..+.........+.++..
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 554332 3333 45667788999999999988 5555444333222221111 112222222233334445
Q ss_pred hccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHH
Q 014646 312 FATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 378 (421)
+...+.......+..++ +.+++.+++.+...+. |..++|.+.|.+.|..| +...+...+.+.+.+
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHH
Confidence 55556666676677766 8999999999777766 99999999999999876 666776665554443
No 97
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=4.8e-22 Score=181.30 Aligned_cols=337 Identities=15% Similarity=0.157 Sum_probs=251.8
Q ss_pred ccchhhHHHhhhhhcCchHHHH-HHHHHHHHHHhhhccc-c-hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc--
Q 014646 4 LLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK-- 78 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r-- 78 (421)
.++..|+.|.++|+-|+||.++ +..++..+++.+..+. + +++...+.-++.-++.+.......+++.|..+++++
T Consensus 83 ~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~ 162 (477)
T PF11700_consen 83 QALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVR 162 (477)
T ss_pred HHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhh
Confidence 4567889999999998777654 4455555566666653 3 444444455555567777788888999999999888
Q ss_pred ------------------------hhHHHHHHhHHHHHhHHHHHHHHHhhc--------ccchhHHHHHhHHHHHHHHHH
Q 014646 79 ------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAFWGEAILMLPFAVL 126 (421)
Q Consensus 79 ------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~gwr~~f~~~~~~~~~~~~~ 126 (421)
++..+.-.....+|.++.-.+.-.+.. ..+-|..+.+.++.-++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP 242 (477)
T PF11700_consen 163 AAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIP 242 (477)
T ss_pred hhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 899888888888888887776655431 223588888888888888888
Q ss_pred HHhcccccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhH
Q 014646 127 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 206 (421)
Q Consensus 127 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 206 (421)
.++..|+.++....++..+. ....+++.++.+|++.+.|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~g~~~l~~t~k~~~~~~~~ 283 (477)
T PF11700_consen 243 LFLWLPDRPGPRPLPSGSSY---------------------------------------LRFGFKRLWRTFKEIRKLRQL 283 (477)
T ss_pred HHHhCCCCCCCCCCCcchhH---------------------------------------HHHHHHHHHHHHHHHHhChHH
Confidence 88777765432111111110 113455666778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHH
Q 014646 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
...+++++++.-+.+.+......|..+..+++..+. .+..+..+.+++|+++.+++.||+|.|.. +.+........
T Consensus 284 ~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~---~~l~~~l~~~~ 360 (477)
T PF11700_consen 284 FLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK---RTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh---HHHHHHHHHHH
Confidence 999999999999999999999999999999997666 44567789999999999999999998743 23333333222
Q ss_pred HHHHHHHh--------hchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 286 ISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 286 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
+..+.... .++.+.+.++..+.|.+.+..++..-++..+..|+++.+...|+++..... .+.+||.+.|.+
T Consensus 361 ~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~-ss~lGPll~g~i 439 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA-SSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 22222222 456677777888899999999999999999999999999999999766666 889999999999
Q ss_pred hhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 358 QDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+.+|+.+.++....++.+++.+++.
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 99999888888888888777776664
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=6.6e-23 Score=189.35 Aligned_cols=375 Identities=11% Similarity=-0.022 Sum_probs=235.3
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc------chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
.+.+++.|+++||+|+|+++.++.++++++.++++++ ++++.+++.|++.|+|.+...+.....+.+|+| ++|
T Consensus 75 g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~R 153 (591)
T PTZ00207 75 GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNR 153 (591)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhh
Confidence 3466789999999999999999999999999999987 689999999999999999999999999999997 569
Q ss_pred hhHHHHHHhHHHHHhHH-HHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhccccc--ccccCCc---ccccchhhh--
Q 014646 79 TAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ--LKGFAPA---ESGKAQVVA-- 150 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~-g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~--~~~~~~~---~~~~~~~~~-- 150 (421)
|++.++...+.++|.++ +++..+++. .+|+..|++.+++.++..++.+.+.++. +++..++ ++++...++
T Consensus 154 G~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (591)
T PTZ00207 154 GAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMR 231 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhh
Confidence 99999999999999976 555555554 3699999999999888888777766322 2211000 000000000
Q ss_pred -c----------cc---------------------------------------------c-------cccccCCCccccc
Q 014646 151 -S----------VS---------------------------------------------E-------GSEASNLNDHVSE 167 (421)
Q Consensus 151 -~----------~~---------------------------------------------~-------~~~~~~~~~~~~~ 167 (421)
. .. . ..+...++++.+.
T Consensus 232 ~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~ 311 (591)
T PTZ00207 232 KGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDG 311 (591)
T ss_pred hhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccc
Confidence 0 00 0 0000000000000
Q ss_pred cchh--hhhhhhhcccc---cchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc-hh-
Q 014646 168 DISD--QASERSIKSIG---ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-NA- 240 (421)
Q Consensus 168 ~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 240 (421)
+..+ +.+.+..+.+. .........+..+++.+.+++..+|.+...+++.......+..++.+..+...+.+ ..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~ 391 (591)
T PTZ00207 312 KAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA 391 (591)
T ss_pred cccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc
Confidence 0000 00000000000 00000011111236777788999999999888887777777777888877764542 22
Q ss_pred -hHHHHhhHhHHHHHHHhHHHHHHHhhccccc---chhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhcccc
Q 014646 241 -DMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 -~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
...+.++.++.+.+|++..|++.....+|.. ..+........+..+..+++...-+...+.+..++.+++.|..++
T Consensus 392 ~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~ 471 (591)
T PTZ00207 392 LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAA 471 (591)
T ss_pred ceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHH
Confidence 2236688889999999999998733333321 111222222222333333333332324667788888999999999
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCc-hhHHHHhhhhhh------------chhhhhhHHHHHHHHHHHHhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN------------NWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.....+.|.+. ++-|+-.-+.. ....+|+.+- -.+.|.++|+-. -+..+|++++++++.+.+...
T Consensus 472 ~~~~i~selFg-k~~g~~yN~~~-~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 472 TIALVTRTIFA-KDPAKHYNFCF-LGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHhc-cchHHHhhHHh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 99999999888 87777766663 3333354432 456677777532 145678888777777766544
Q ss_pred h
Q 014646 384 V 384 (421)
Q Consensus 384 ~ 384 (421)
.
T Consensus 550 ~ 550 (591)
T PTZ00207 550 Y 550 (591)
T ss_pred h
Confidence 3
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=1.9e-21 Score=181.01 Aligned_cols=333 Identities=12% Similarity=0.012 Sum_probs=186.6
Q ss_pred hhhHHHhhhhh-cCchHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHhhhhhhhhcccccccccccCCCCC--chhHH
Q 014646 7 ASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ--KTAWL 82 (421)
Q Consensus 7 ~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~ 82 (421)
..+++|+++|| +|||+++.++.++.+++..++++++ +.+.+++.|+++|++.|...+...+++.|++|+++ |..++
T Consensus 73 ~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~ 152 (500)
T PRK09584 73 LVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAF 152 (500)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcc
Confidence 34689999999 5999999999999999999998875 56677789999999999999999999999998654 45688
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccC-Ccccccchhhhcccc-------
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVSE------- 154 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~------- 154 (421)
++++.+.++|..+||.+++++.+++|||+.|++.++..++..+..++. +...++.. ++++++.+.......
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFC-QRWVKQYGSKPDFEPINYRKLLLTIVGVVAL 231 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-HHHhccCCCCCCccccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999876544433332222 11111110 011000000000000
Q ss_pred --cccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 014646 155 --GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
.......+.+ ....... ..... ......++. ...++.-++|.+.... .+.....++......|.++.
T Consensus 232 ~~~~~~~~~~~~---~~~~~~~-~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~i~f~~~~~q~~~~l~ 300 (500)
T PRK09584 232 IAIATWLLHNQE---IARMALG-VVALG----IVVIFGKEA-FAMKGAARRKMIVAFI--LMLEAIIFFVLYSQMPTSLN 300 (500)
T ss_pred HHHHHHHHhcch---HHHHHHH-HHHHH----HHHHHHHHH-hhcCHHHHHHHHHHHH--HHHHHHHHHHHHHHhccHHH
Confidence 0000000000 0000000 00000 000000000 0001111222222211 12222333333344444432
Q ss_pred H----h-----hccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc--------
Q 014646 233 N----I-----YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-------- 295 (421)
Q Consensus 233 ~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 295 (421)
. . .+.......+..+..+..++..++.+++-+|.++|.... ..+..+.++.++..+.+....
T Consensus 301 ~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~-~~~~~G~~l~~l~f~~l~~~~~~~~~~~~ 379 (500)
T PRK09584 301 FFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMP-HKFAIGMVLCSGAFLVLPLGAKFANDAGI 379 (500)
T ss_pred HHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 2 1 122211223344555555666666666667776664322 334444444444443332222
Q ss_pred -hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhH
Q 014646 296 -SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+.+.......+.+++.....+....++.+..|++.||+.+|+..... .+|..++..+
T Consensus 380 vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~-a~g~~~~g~~ 437 (500)
T PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTT-AGAALIAGYV 437 (500)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 13456667777888888888999999999999999999999874333 3244444333
No 100
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=2.3e-21 Score=169.06 Aligned_cols=275 Identities=12% Similarity=0.092 Sum_probs=197.3
Q ss_pred cccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcc------------
Q 014646 39 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 106 (421)
Q Consensus 39 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 106 (421)
+...+|+.+++.-++.|.|.+...+..+.++++..+++++.+.+++.+.++++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999999999999999999999999999999999999999999987731
Q ss_pred ----cchhHHHHHhHHHHHHHHHHHHhcc-cccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhccc
Q 014646 107 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 181 (421)
Q Consensus 107 ----~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (421)
.+|+++|++.+.+.++..+...+.. ||..+ ++.+... + + +.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~~----------------------~---~---~~- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARVS----------------------S---G---DT- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccccc----------------------c---c---cc-
Confidence 4799999977776555555444332 33110 0000000 0 0 00
Q ss_pred ccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh--hccchhhH-HHHhhHhHHHHHHHhH
Q 014646 182 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 258 (421)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (421)
...+.++++|.++...+..+++.....+...|.+.|+.+. ++.++... ...+....+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0012345677888777777887778889999999999864 46665444 4457778888999999
Q ss_pred HHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHH
Q 014646 259 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 338 (421)
Q Consensus 259 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (421)
++++.||++++ +.+.....++.+..++....++... .....+.+++.+..+|...+...+..|+ +.+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 5555555544444443333333322 3345567788888888888888888765 456677775
Q ss_pred HHHHHHhccCCchhHHHHhhhhhhchhhhhhH
Q 014646 339 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 339 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 370 (421)
.... +|+.+.|.+.|.+.|..| .+.++++
T Consensus 271 -~~~~-~Gg~i~P~l~G~lad~~g-~~~a~~v 299 (310)
T TIGR01272 271 -CLAI-VGGAIVPLLQGSLADCLG-IQLAFAL 299 (310)
T ss_pred -HHHH-hcchHHHHHHHHHHHhcc-chHHHHH
Confidence 4444 588999999999999876 5555553
No 101
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=2.9e-21 Score=178.24 Aligned_cols=336 Identities=20% Similarity=0.355 Sum_probs=252.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc--------------------c-------------------
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------------F------------------- 42 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------------~------------------- 42 (421)
+|..+...+..+..-|.-|-|++-+|+++++++++++++- +
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 4667788899999999999999999999999999998762 0
Q ss_pred ----------h--hH-HHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhccc--
Q 014646 43 ----------D--FW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-- 107 (421)
Q Consensus 43 ----------~--~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-- 107 (421)
+ ++ .++++.++.|+|....++.+.+|+-|...+++-+..+|+......+|.++|.++++++...+
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 0 22 56779999999999999999999999999999999999999999999999999999886321
Q ss_pred -----------------chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCccccccch
Q 014646 108 -----------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDIS 170 (421)
Q Consensus 108 -----------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (421)
-|..-|++.+.+.++.++..+++ |+..+....+.+.+.. +..+
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f-Pk~lp~~~~~~~~~~~-------------------~~~k 362 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF-PKELPKSQKRKRARDL-------------------HVLK 362 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC-cccCccccccchhhhh-------------------cccc
Confidence 27777888888887777776666 5433321111000000 0000
Q ss_pred hhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH--HHHhhH
Q 014646 171 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVT 248 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 248 (421)
++.. ..+......+..+++.+..+++++||.+...+++..+....+.++.+|+|.|++.+++.++..+ +.+.+.
T Consensus 363 ~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~ 438 (735)
T KOG3626|consen 363 TESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIG 438 (735)
T ss_pred cccc----cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhh
Confidence 0000 1111122224567788889999999999999999999999999999999999999999996544 333455
Q ss_pred hHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh-----------------------------------
Q 014646 249 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------------------------------- 293 (421)
Q Consensus 249 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 293 (421)
..+..+|.+++|++++|+.-+.+...+..++..++..++....++
T Consensus 439 vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C 518 (735)
T KOG3626|consen 439 VPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDC 518 (735)
T ss_pred hhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCC
Confidence 566678999999999999766544334444444444444333322
Q ss_pred --------------------------------------------hc--------------------hhHHHHHHHHHHHH
Q 014646 294 --------------------------------------------LS--------------------SLYGFLALFTVGEL 309 (421)
Q Consensus 294 --------------------------------------------~~--------------------~~~~~~~~~~~~~~ 309 (421)
.+ ....+++.+++..+
T Consensus 519 ~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf 598 (735)
T KOG3626|consen 519 SCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSF 598 (735)
T ss_pred CCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHH
Confidence 00 12345556666667
Q ss_pred HHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
..+....+.+.++.+.+++|+|+.++|+..+..+++|.+-+|+++|++.|..
T Consensus 599 ~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 599 IGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred HHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 7778888899999999999999999999999999999999999999999965
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=2.8e-21 Score=178.56 Aligned_cols=305 Identities=12% Similarity=0.059 Sum_probs=196.2
Q ss_pred ccchhhHHHhhhhh----cCch-HHHHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhccccccccccc
Q 014646 4 LLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 4 ~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
.++..|+.|+++|| +||| +.++.+.+..+++..+....++ +..+++.-++.+.+.........++.+|+
T Consensus 58 dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~ 137 (444)
T PRK09669 58 DAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAI 137 (444)
T ss_pred HHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHh
Confidence 45778999999998 7774 5566777777777665544443 45556666677777777777778899999
Q ss_pred C-CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc-------ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccc
Q 014646 73 A-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 144 (421)
Q Consensus 73 ~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 144 (421)
. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.+++.++..++.++..+|..+. ++++
T Consensus 138 t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~---~~~~ 214 (444)
T PRK09669 138 TNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP---EVDN 214 (444)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC---CCcC
Confidence 8 45789999898888888888877765544332 34788888888887776666555554442111 0000
Q ss_pred cchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHH
Q 014646 145 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS 224 (421)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 224 (421)
+ .+..++++.+++||.++...+..++.........
T Consensus 215 ~---------------------------------------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~ 249 (444)
T PRK09669 215 S---------------------------------------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRG 249 (444)
T ss_pred C---------------------------------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh
Confidence 0 0112457778899998887776665555554444
Q ss_pred HHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH-HHH-hhchhHHHHH
Q 014646 225 YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-CLSSLYGFLA 302 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 302 (421)
...+.|.+...+.+.....+.....+..+++.++.+++.||+|+| +..........+..+ ... ..++.+...+
T Consensus 250 ~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (444)
T PRK09669 250 GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWTIVAFVILSALIFFIPPSNVWLIFA 324 (444)
T ss_pred hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 444444443333332222333444566778888999999999987 555444433332222 222 2345555565
Q ss_pred HHHHHHHHHhccccchhhhhhcccCc-------chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
..++.+++.+...+...++..|.++. +..|...|..+..... |..+++.+.|.+.+..|
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~alg~~i~g~ll~~~G 390 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 66667777777777778888777652 2345667777555555 88999999999988765
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=4.2e-21 Score=178.42 Aligned_cols=309 Identities=7% Similarity=-0.024 Sum_probs=195.1
Q ss_pred cchhhHHHhhhh----hcCc-hHHHHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 5 LVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++..|+.|+++| |+|| |+.++++.+..+++..++-..++ +..+++.-++.+++.....+...+++.|..
T Consensus 56 ai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt 135 (473)
T PRK10429 56 AINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLT 135 (473)
T ss_pred HHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhC
Confidence 466788999999 6698 55677788887777655543332 334555666778888888888899999998
Q ss_pred -CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc-------ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccccc
Q 014646 74 -PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 -~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+++||.+..++-..+.++|..+.+.+...+.+ ..+|+....+.+++.++..+..++..||...... ++.+
T Consensus 136 ~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~--~~~~ 213 (473)
T PRK10429 136 LDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDN--QVSA 213 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccc--cccc
Confidence 58899999998777777776666555443321 2357777777777666655555554455221100 0000
Q ss_pred chhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 014646 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
.. +..+..+.++.+++||.++..+...++..........
T Consensus 214 ~~-----------------------------------------~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~ 252 (473)
T PRK10429 214 EG-----------------------------------------SHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIING 252 (473)
T ss_pred cc-----------------------------------------cCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 0001123456677898888887777777766666666
Q ss_pred HhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-----hhchhHHH
Q 014646 226 WGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 300 (421)
+.+.|.+...+.+.....+.....+..+++.++.+++.||+|+| +.+..+..+..+..+... ...+.+..
T Consensus 253 ~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (473)
T PRK10429 253 FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGASIFPVLSCGVLLLMGLAAPHNALLI 327 (473)
T ss_pred heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHhccCchhHHHH
Confidence 66666555444332222333445577788889999999999998 665544444333222221 12334444
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccC-------cchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
++...+.+++.+...+...++..|.++ .+..|...|..+..... |..+++.+.|++.+..|
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-GSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 445555666666666667777787755 23455577887555555 88889999999988665
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=1.7e-20 Score=172.46 Aligned_cols=306 Identities=16% Similarity=0.152 Sum_probs=229.3
Q ss_pred cchhhHHHhhhh----hcCchHH-HHHHHHHHHHHHhhhccc-c-------hhHHHHHHHHHhhhhhhhhcccccccccc
Q 014646 5 LVASPIFASLAK----SHNPFRL-IGVGLSVWTFATAGCGSS-F-------DFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 5 ~~~~~~~g~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
++..|+.|.++| |+||||. ++++....+++.+++... + ....+.+.-++..++.........++..|
T Consensus 51 ai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~ 130 (428)
T PF13347_consen 51 AITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPE 130 (428)
T ss_pred hhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcc
Confidence 466789999999 8997775 667888888888777766 4 22335667777788999999999999999
Q ss_pred cCC-CCCchhHHHHHHhHHHHHhHHHHHHHHHhhcc-------cchhHHHHHhHHHHHHHHHHHHhcccccccccCCccc
Q 014646 72 NAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 143 (421)
Q Consensus 72 ~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 143 (421)
..+ +++|.+..+.-..+..+|..+...+...+.+. .+|++...+.+++.++..++..+..+|..+.. +++
T Consensus 131 lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~--~~~ 208 (428)
T PF13347_consen 131 LTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEV--TEQ 208 (428)
T ss_pred ccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccc--ccc
Confidence 998 57899999999999999887666666655432 16999999999988888777777766611110 000
Q ss_pred ccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHH
Q 014646 144 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 223 (421)
++ ..+..+.++.+++||.++......++........
T Consensus 209 ~~--------------------------------------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 209 EK--------------------------------------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred cc--------------------------------------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhh
Confidence 00 0112345778889999998888888888887777
Q ss_pred HHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh--chhHHHH
Q 014646 224 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFL 301 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 301 (421)
....+.|.+...+.+.....+.....+..+++.++.++++||+|+| +.+..+..+.+...+..... ++.+...
T Consensus 245 ~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (428)
T PF13347_consen 245 NTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYIIGLLLAALGFLLLFFLGPGSPWLVL 319 (428)
T ss_pred hhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehhhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 7788888888877775445555667788899999999999999999 66666666666655554444 4778888
Q ss_pred HHHHHHHHHHhccccchhhhhhcccCc-------chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 302 ALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+...+.+.+.+..+....++..|..+. +..|...|+.+..... +..+++.+.+.+.+..|
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~-~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI-GQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-HHHHHHHHHHHHHHHhC
Confidence 888888888888888888888887763 3457888888666555 88888888888877654
No 105
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=3.9e-20 Score=158.77 Aligned_cols=333 Identities=14% Similarity=0.103 Sum_probs=251.1
Q ss_pred ccchhhHHHhhhhhcCchHH-HHHHHHHHHHHHhhhcccch---hHHHHHHHHHhhhhhhhhcccccccccccCCCCCch
Q 014646 4 LLVASPIFASLAKSHNPFRL-IGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.++-+|+.|.++|+.|+||. +-....+..++.++..++++ ++..++.-.+..++.......-.+++.+..++++-+
T Consensus 71 ia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ 150 (438)
T COG2270 71 IALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG 150 (438)
T ss_pred HHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC
Confidence 34667889999999996665 55556666666666666655 444555777788888888888999999999999888
Q ss_pred hHHHHHHhHHHHHhHHHHHHH--HHh-h---------------cccchhHHHHHhHHHHHHHHHHHHhcccccccccCCc
Q 014646 80 AWLSMFYMCIPTGVALGYVYG--GVV-G---------------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 141 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~--~~l-~---------------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (421)
+..+.-.....+|.++.-++. ..+ . +...-|..+.+.++--++..+-.++..|+.++.. .+
T Consensus 151 riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~-~~ 229 (438)
T COG2270 151 RISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKIS-SP 229 (438)
T ss_pred cccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccccc-cc
Confidence 888777777777766655443 111 1 2234677777777766666666665554432210 00
Q ss_pred ccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHH
Q 014646 142 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 221 (421)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 221 (421)
+ ++...+..++.+.+++++.+++.+...+++.+++.-+.+
T Consensus 230 ~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 230 P----------------------------------------PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred c----------------------------------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 0 011124566677889999999999999999999999999
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHH
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 300 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
....+...|....+|.+..+. .+.....+.+++|+++.|++.||++.| +++....++....++...+......+
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~~~~~~~~~~~~~~f 344 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSIAALYLIFLEGELDF 344 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHHHHHHHHHccccHHH
Confidence 999999999998999997666 455777899999999999999999998 66666666666666666656666666
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
+++..+.+.+.+..+...-++..+.+|+++-++..|+++...+. ++..||.+.+.+.+.+|+.+..+.....+..++..
T Consensus 345 ~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 345 WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 66777788888889999999999999999999999999776666 88999999999999999887777777777666665
Q ss_pred Hhh
Q 014646 381 IWF 383 (421)
Q Consensus 381 ~~~ 383 (421)
.+.
T Consensus 424 ~L~ 426 (438)
T COG2270 424 LLL 426 (438)
T ss_pred hEE
Confidence 554
No 106
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.87 E-value=9.6e-20 Score=165.14 Aligned_cols=342 Identities=13% Similarity=0.034 Sum_probs=217.7
Q ss_pred cccchhhHHHhhhh----hcCchHHHHHH-HHHHHHHHhhhcccchhHH-----------------HHHHHHHhhhhhhh
Q 014646 3 GLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFWS-----------------IAICRMLVGVGEAS 60 (421)
Q Consensus 3 g~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~~-----------------l~~~r~l~G~~~~~ 60 (421)
..++.+|+.|+++| |+||||.++++ .....++..+.+++++.+. ++++-.+..++...
T Consensus 51 ~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~ 130 (477)
T TIGR01301 51 SGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM 130 (477)
T ss_pred HHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999 59999998774 6666677777777766432 22233344457777
Q ss_pred hcccccccccccCCCCCc--hhHHHHHHhHHHHHhHHHHHHHHHh--hccc-------------chhHHHHHhHHHHHHH
Q 014646 61 FISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSHL-------------NWRYAFWGEAILMLPF 123 (421)
Q Consensus 61 ~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l--~~~~-------------gwr~~f~~~~~~~~~~ 123 (421)
..+...++++|.+|+++| +.+.++.+...++|.++|+.+++.. .+.+ +.|..|++.+++.++.
T Consensus 131 ~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~ 210 (477)
T TIGR01301 131 LQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAIL 210 (477)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHH
Confidence 888889999999998865 5799999999999999999999875 2211 5789999998887777
Q ss_pred HHHHHhcccccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhch
Q 014646 124 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 203 (421)
Q Consensus 124 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 203 (421)
.++..+..||.+... +++.+.. +.+ +. ++.. .....++.++.++++ .
T Consensus 211 ~l~t~~~v~E~~~~~--~~~~~~~-------~~~-------------~~-----~~~~----~~~~~~~i~~~~~~m--P 257 (477)
T TIGR01301 211 TYIALSAVKENPLIG--SDDFINS-------EAA-------------PP-----SKHG----EEAFFGELFGAFKYL--P 257 (477)
T ss_pred HHHHeeeeeccCCCc--cccchhh-------hcc-------------cc-----cccc----hhhhHHHHHHHHHHC--C
Confidence 777777777754221 1100000 000 00 0000 001122333334332 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHH-Hhhccch-------hh---H-HHHhhHhHHHHHHHhHHHHHHHhhccccc
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSN-------AD---M-MFGGVTIVCGIVGTISGGFILDQMGATIS 271 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 271 (421)
+.++.+++..++...+.+.+..|.+.|.. +.++.++ .. . .-..+..+...+.+++..++.+|+|+|+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k- 336 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK- 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 67788888888888888888888887765 4454321 11 1 1123344444556666777888887531
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhch---------------------hHHHHHHHHHHHHHHhccccchhhhhhcccCc--
Q 014646 272 NAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-- 328 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 328 (421)
.....+.++.+.++....+.++ .+..++.+.+.|+........-++++.+..++
T Consensus 337 ---~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 337 ---RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 3434444444444333322221 35566777778888888888889999999985
Q ss_pred chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch-hhhhhHHHHHHHHHHHHh
Q 014646 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW-RKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~ 382 (421)
+..|..+|+.|.+... ..++.....|.+.+..|+- ...+.+.++..+++.+..
T Consensus 414 ~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 414 AGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred CCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 4669999999988877 8887777777766666643 334444444444444433
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.87 E-value=1.2e-19 Score=162.71 Aligned_cols=307 Identities=19% Similarity=0.141 Sum_probs=214.0
Q ss_pred cccchhhHHHhhhhhcC-chHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 3 GLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
...++++++|.++||++ +||++.+..++.++........++++.+++.-++..+......|...++..++..+ ++.-
T Consensus 49 ~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~ 126 (400)
T PF03825_consen 49 ARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKD 126 (400)
T ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCC
Confidence 34678899999999985 67788888888888777778888999888888888888887888888877777652 3444
Q ss_pred HHHHHhHHHHHhHHHHHH-HHHhhccc---chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccc
Q 014646 82 LSMFYMCIPTGVALGYVY-GGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~-~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
.|-.....++|.+++... +..+.... +..+.+++.+..+++.....+ ..|+.++++..+++.+..
T Consensus 127 YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~---------- 195 (400)
T PF03825_consen 127 YGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKL---------- 195 (400)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccc----------
Confidence 555666666776666443 22333222 233456666655444443333 346544221111111000
Q ss_pred ccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhcc
Q 014646 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
...+..+++|+|++....+..++.......+..+.+.|+++.++.
T Consensus 196 -----------------------------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~ 240 (400)
T PF03825_consen 196 -----------------------------------LGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGY 240 (400)
T ss_pred -----------------------------------cchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 012344688999999888888888888888999999999998865
Q ss_pred chhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-chhHHHHHHHH----HHHHHH
Q 014646 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-SSLYGFLALFT----VGELLV 311 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~ 311 (421)
+.... ...++..++.++.-...+++.+|+|.+ +++..+.+..++=..+.... ++.+...+... +-+...
T Consensus 241 ~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 241 SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH
Confidence 43332 333555677788888889999999887 77777777777665555554 44444333333 467777
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+.....++.+..|++.|+++.++++.....+|..+|..+.|++.|+.|
T Consensus 316 ~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 316 GLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 777788889999999999999999999887777799999999999999876
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.86 E-value=1.7e-20 Score=173.09 Aligned_cols=317 Identities=14% Similarity=0.017 Sum_probs=197.3
Q ss_pred hhHHHhhhhhcC-----chHHHHHHHHHH-HHHHhhhcccchhHHHH-HHHHHhhhhhhhhcccccccccccCCCCCchh
Q 014646 8 SPIFASLAKSHN-----PFRLIGVGLSVW-TFATAGCGSSFDFWSIA-ICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 8 ~~~~g~l~dr~G-----rr~~l~~~~~~~-~~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
.+++|+++||++ ||+.++++.++. .++....+..++..... +..++.+++.+...++.-++..|..+ +++..
T Consensus 77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~ 155 (468)
T TIGR00788 77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA 155 (468)
T ss_pred HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc
Confidence 456999999998 777788887776 34444455555544444 48899999999999999999999998 44444
Q ss_pred H---HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccccc
Q 014646 81 W---LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 81 ~---~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
. .+......++|.++|+.+++.+.+.++||..|++.+++.++..+. .++.||.+....++.+++..
T Consensus 156 ~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~~~~~~~~~~~~~---------- 224 (468)
T TIGR00788 156 GPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SNLSKERRAFVRPRIGTYLE---------- 224 (468)
T ss_pred CCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HHhcccccccccccccccch----------
Confidence 3 334444456899999999999999999999999998887766333 34445532100000000000
Q ss_pred ccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHH-HHHHHHHHHHHhhhHHHHhhc
Q 014646 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (421)
. ......... ....++...+.+..+++|.++...+..++ +...... ....-.+..+..+
T Consensus 225 ---------~-~~~~~~~~~---------~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~-~~~~f~~~~~~lG 284 (468)
T TIGR00788 225 ---------M-NMALLTLGV---------LANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA-SGSVFCATTQCLP 284 (468)
T ss_pred ---------h-hhhhhhhhH---------HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC-CceeEEEEcccCC
Confidence 0 000000000 00011112234455677877765554444 2211111 1100012234466
Q ss_pred cchhhHH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-h---------hchhHHHHHHHH
Q 014646 237 MSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-C---------LSSLYGFLALFT 305 (421)
Q Consensus 237 ~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~ 305 (421)
.++.... ......++.+++..+.+++.+|++.| +.+....++.....+... . .++.+.......
T Consensus 285 ~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 285 GGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 6655543 33555677778888888887777776 666666655555443321 0 122333444455
Q ss_pred HHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 306 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+.+++.+....+...++.+..|++.+++..++.+...+. |..+++.+++.+.+..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL-GSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 667777778888899999999999999999999777665 89999999999998876
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=6.7e-19 Score=160.38 Aligned_cols=126 Identities=14% Similarity=0.134 Sum_probs=100.8
Q ss_pred ccchhhHHHhhhhhc-CchHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHhhhhhhhhcccccccccccCCCC--Cch
Q 014646 4 LLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP--QKT 79 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~ 79 (421)
..++++++|+++||+ ||||+++++.++.+++.++.+..+ +...+.+...+.++|.|...+...++++|.+|++ +|.
T Consensus 58 ~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~ 137 (493)
T PRK15462 58 VYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRD 137 (493)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcccc
Confidence 456788999999999 999999999999999988776543 2233444445555667777787889999999875 688
Q ss_pred hHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
.++++.+.+.++|..++|.+.+++.+.+|||+.|.+.++.. +.+++.++.
T Consensus 138 sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm-~l~li~~~~ 187 (493)
T PRK15462 138 GGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM-IAGLVIFLC 187 (493)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH-HHHHHHHHH
Confidence 99999999999999999999999999999999999976643 444444433
No 110
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.85 E-value=5.9e-23 Score=189.88 Aligned_cols=342 Identities=21% Similarity=0.384 Sum_probs=3.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc---------------------------------------
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--------------------------------------- 42 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------------------------------------- 42 (421)
++.++..++..++.+|..|-|.+-+|.++.+++++++++-+
T Consensus 49 i~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 128 (539)
T PF03137_consen 49 IGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQD 128 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCcccc
Confidence 45677888899999998899999999999999999977520
Q ss_pred -----------hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcc-----
Q 014646 43 -----------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----- 106 (421)
Q Consensus 43 -----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----- 106 (421)
-+..+++++++.|+|....++.+.+|+-|..++++-+..+|+..+...+|.++|.++++.+...
T Consensus 129 ~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~ 208 (539)
T PF03137_consen 129 CCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFP 208 (539)
T ss_dssp -----------------------SSS------------------------------------------------------
T ss_pred ccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCc
Confidence 1356788999999999999999999999999999999999999999999999999999877632
Q ss_pred ----------------cc-hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCccccccc
Q 014646 107 ----------------LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 169 (421)
Q Consensus 107 ----------------~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (421)
.| |-.-|++.+.+.++.++..+++ |+..+...+.++.+...+ ...
T Consensus 209 ~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~~~~~~~~~~~~~-----------------~~~ 270 (539)
T PF03137_consen 209 KVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPGTSERQEEKESSE-----------------RKE 270 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCcccccchhhhhh-----------------cch
Confidence 12 6666777777766666655555 554433211110000000 000
Q ss_pred hhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH--HHHhh
Q 014646 170 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGV 247 (421)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 247 (421)
++...++..+.+..+......+++++..+++++||.+....++.........++.+|+|.|++.+++.++..+ ..+.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v 350 (539)
T PF03137_consen 271 EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIV 350 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhh
Confidence 0000000011111112235567778889999999999999999999999999999999999999999986444 23344
Q ss_pred HhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--------------h-------------------
Q 014646 248 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--------------L------------------- 294 (421)
Q Consensus 248 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~------------------- 294 (421)
...++++|.+++|++++|++-+.+...+......++..+.....++ .
T Consensus 351 ~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~ 430 (539)
T PF03137_consen 351 SIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSC 430 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCc
Confidence 4557789999999999999766444334433333333332111111 0
Q ss_pred ------------------chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHH
Q 014646 295 ------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 295 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
.....+++..++..+..+....+...+..+.+++++|+.|.|+.....+.+|.+-+|+++|.
T Consensus 431 ~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~ 510 (539)
T PF03137_consen 431 CSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGA 510 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhH
Confidence 01223444555555666677788888899999999999999999999999999999999999
Q ss_pred hhhhh
Q 014646 357 LQDHV 361 (421)
Q Consensus 357 l~~~~ 361 (421)
+.|..
T Consensus 511 iiD~t 515 (539)
T PF03137_consen 511 IIDST 515 (539)
T ss_dssp -----
T ss_pred HHhhh
Confidence 99953
No 111
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=6.7e-20 Score=147.87 Aligned_cols=317 Identities=11% Similarity=0.001 Sum_probs=201.0
Q ss_pred cchhhHHHhhhhh-cCchHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchh
Q 014646 5 LVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 5 ~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
.+-+.++|++.|| +|-|..-++-+....++.++++ .++.+|++.++|++.|+|.-....+-..+..-|+..||.+.
T Consensus 93 vVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~ 172 (459)
T KOG4686|consen 93 VVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNF 172 (459)
T ss_pred EEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccc
Confidence 3456788999997 6887766666666666776655 46899999999999999988888888999999999999999
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchh------H---HHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhc
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWR------Y---AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 151 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr------~---~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (421)
++|+.....-+|..+--.+.+++.+..+=- . ..+..+.......+.+.... .. .+++++.....+
T Consensus 173 vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l----g~--~D~rAerilh~e 246 (459)
T KOG4686|consen 173 VFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL----GL--SDDRAERILHLE 246 (459)
T ss_pred hhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh----hh--hhhHHHHHHhhh
Confidence 999999999999888777766666543210 0 01111111111111111111 00 001111000000
Q ss_pred ccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 014646 152 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (421)
+....+. .+ ..+.+. -.|.+|.+.+...++......+....|.++
T Consensus 247 ----------------------~g~~Ge~-------pk----Ltdv~~--f~ppfw~~~iicv~yyva~fPFi~lg~~fF 291 (459)
T KOG4686|consen 247 ----------------------EGFLGEE-------PK----LTDVNT--FYPPFWVLVIICVLYYVAWFPFITLGPMFF 291 (459)
T ss_pred ----------------------cCcccCC-------cc----cccccc--cCccHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 0000000 00 001111 247788888888888888888999999999
Q ss_pred HHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH-HHHHHHHHHHHh-hchhHHHHHHHHHHH
Q 014646 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT-FLGAISCLTAFC-LSSLYGFLALFTVGE 308 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 308 (421)
++.+|.++.++ ...+.....+.+.+++.|.++||+|++ ...+.+. +.....-..+.+ .-+++.-+ ++.|
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m---~~lG 363 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPYTSM---TFLG 363 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHHHHH---HHHh
Confidence 99999997655 334555666777888999999999997 3332222 222222222222 22343333 3333
Q ss_pred HHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHH
Q 014646 309 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 371 (421)
..........+..+...+|+++.|++.|..+...+. |-.+.|++.|.+.|.-|+|.+.-.++
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNL-gla~i~Iiag~i~d~~g~y~~le~ff 425 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNL-GLAFIPIIAGFIADGDGSYDNLEAFF 425 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhh-hhhHHhhhhheeecCCCchhhHHHHH
Confidence 333333333555667778889999999999888887 98999999999999877665443333
No 112
>PRK11462 putative transporter; Provisional
Probab=99.85 E-value=7e-19 Score=162.38 Aligned_cols=303 Identities=13% Similarity=0.034 Sum_probs=180.8
Q ss_pred cchhhHHHhhhhh----cCchHH-HHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 5 LVASPIFASLAKS----HNPFRL-IGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~~~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++.-|+.|+++|| +||||. ++++.+..+++..++-..++ +..+.+.-++..++.......-.++..|..
T Consensus 59 ai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt 138 (460)
T PRK11462 59 AISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVIT 138 (460)
T ss_pred HHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhc
Confidence 4567899999996 687665 66677777777766554442 334555666678888888888889999998
Q ss_pred C-CCCchhHHHHHHhHHHHHhHHHHHHHHHhhcc-------cchhHHHHHhHHHHHHHHHHHHhcccccccccCCccccc
Q 014646 74 P-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+ ++||++..++...+..+|..+++.+...+.+. .+|+....+.+++.++...+++...+|..+. ++++
T Consensus 139 ~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~----~~~~ 214 (460)
T PRK11462 139 NDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA----PPTT 214 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC----CccC
Confidence 7 68899999999999999988887776554432 3588877777777666655555444442111 0000
Q ss_pred chhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 014646 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
. ...+.++..++|+.++......++..........
T Consensus 215 ~---------------------------------------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~ 249 (460)
T PRK11462 215 T---------------------------------------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGG 249 (460)
T ss_pred C---------------------------------------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0123466778888887776555555444333333
Q ss_pred HhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHH-HHHHHHhhc-hhHHHHHH
Q 014646 226 WGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SCLTAFCLS-SLYGFLAL 303 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 303 (421)
....|.+...+.+.....+.....++.+++.++++++.||+++| +........... ..+...... +.....+.
T Consensus 250 ~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 250 AMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred HhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 33333333344333222344556677888999999999999987 444322222222 222222112 22223333
Q ss_pred HHHHHHHHhccccchhhhhhcccC-----cchh--HHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 304 FTVGELLVFATQAPVNYVCLHSVK-----PSLR--ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
.++.+++.+...+....+..|..+ +..| |...+..+..... |..+++.+.|.+.+..|
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl-g~alg~~i~g~iL~~~G 389 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL-GLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 344455444444444555555443 1133 4444555344444 88888888888887644
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=5.2e-19 Score=163.76 Aligned_cols=305 Identities=10% Similarity=0.002 Sum_probs=185.9
Q ss_pred cccchhhHHHhhhhhc----CchHH-HHHHHHHHHHHHhhh-c----ccch--hHHHHHHHHHhhhhhhhhccccccccc
Q 014646 3 GLLVASPIFASLAKSH----NPFRL-IGVGLSVWTFATAGC-G----SSFD--FWSIAICRMLVGVGEASFISLAAPFID 70 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~----Grr~~-l~~~~~~~~~~~~~~-~----~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~ 70 (421)
..++..++.|+++||. ||||. +.++.+...+..++. . ++++ ...+++.-++.+++.+...+...++..
T Consensus 56 ~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 135 (448)
T PRK09848 56 FDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLAT 135 (448)
T ss_pred HHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhh
Confidence 3467889999999996 77774 455555444444332 1 2222 223444556778888888887778877
Q ss_pred ccCCC-CCchhHHHHHHhHH-----HHHhHHHHHHHHHhhccc--chhHHHHHhHHHHHHHHHHHHhcccccccccCCcc
Q 014646 71 DNAPV-PQKTAWLSMFYMCI-----PTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 142 (421)
Q Consensus 71 ~~~~~-~~r~~~~~~~~~~~-----~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 142 (421)
+..++ ++|.+..++-..+. .++..++|.++....+.. +|.....+.++++++..++.+...||..+. +
T Consensus 136 ~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~----~ 211 (448)
T PRK09848 136 AMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR----I 211 (448)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC----C
Confidence 77654 67888776665443 345556666665432211 122222233333333333333333432110 0
Q ss_pred cccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHH
Q 014646 143 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 222 (421)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 222 (421)
+++ ....+.++.+++||.++...+..++.......
T Consensus 212 ~~~---------------------------------------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~ 246 (448)
T PRK09848 212 VAQ---------------------------------------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFA 246 (448)
T ss_pred ccC---------------------------------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 000 01123467888999999888887877777777
Q ss_pred HHHHhhhHHHHhhccchhhHHHHhhH-hHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc--hhHH
Q 014646 223 YSYWGPKAGYNIYHMSNADMMFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYG 299 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 299 (421)
...+.|.|.++..+.++....+.... .++.+++.++.+++.||+++| +.+..+..+..+..+.....+ +.+.
T Consensus 247 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~~g~~~~~i~~~~~~~~~~~~~~~ 321 (448)
T PRK09848 247 VSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFLIGALLGTCGYLLFFWVSVWSLPV 321 (448)
T ss_pred HhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcCchhHHH
Confidence 77778888888777665433333222 456677888999999999988 666655555444444333322 3444
Q ss_pred HHHHHHHHHHHHhccccchhhhhhcccCcc-------hhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 300 FLALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
......+.+++.+...+...+...+..+.+ ..|...|+.+..... |..+++.+.+.+.+..|
T Consensus 322 ~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl-g~aig~~i~g~~l~~~G 390 (448)
T PRK09848 322 ALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC-GQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 444455666777777777777777776543 458889998655555 88889989888877654
No 114
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=6.7e-18 Score=148.45 Aligned_cols=329 Identities=15% Similarity=0.112 Sum_probs=208.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHH---HHHhhhcccc----hhH-HHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWT---FATAGCGSSF----DFW-SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~----~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
..+.+|+.|.++||+|.||-++....+.. ...+...+.+ |.+ ..+++-+..|+......|+.-+++.++..
T Consensus 56 ~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr- 134 (412)
T PF01306_consen 56 ALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR- 134 (412)
T ss_dssp HHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH-
T ss_pred HHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH-
Confidence 45678999999999997776544432221 2222222222 221 22223333344444444445455544432
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+.+.-.|-.-...++|.+++..++|.+.+. +-+..|++....+++..++.++..|+.++.....+..+.+
T Consensus 135 -~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~-------- 204 (412)
T PF01306_consen 135 -RNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK-------- 204 (412)
T ss_dssp -HHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS---------
T ss_pred -HhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------
Confidence 234556777788899999999999998863 5677888877766666666555555432221111100000
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
+.+...++..+++|+|++|...+........+..+....|.|..+.+
T Consensus 205 ---------------------------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f 251 (412)
T PF01306_consen 205 ---------------------------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF 251 (412)
T ss_dssp --------------------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ---------------------------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000234668889999999888766666667777666777777655
Q ss_pred ccchhhH----HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 014646 236 HMSNADM----MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 236 ~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
....... .+.++..+..++...+..++.+|+|.| +.++....+..+=.......++.+.....-.+-+.-.
T Consensus 252 ~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 252 QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEF 326 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHH
T ss_pred cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 4432221 233555567788888999999999998 8888888777777777777888888888888887777
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
........-++.+.+|++..++...+.......+|.++.+.+.|.+.|+.| ++..+++.+.+.+...++.
T Consensus 327 ~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~ 396 (412)
T PF01306_consen 327 PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLIS 396 (412)
T ss_dssp HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHh
Confidence 777778888999999999988888886444444587888889999999987 6667777766654444433
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.79 E-value=7.7e-17 Score=143.17 Aligned_cols=308 Identities=10% Similarity=0.036 Sum_probs=219.5
Q ss_pred cchhhHHHhhhhh----cCchH-HHHHHHHHHHHHHhhhcccch------hHHHHHHHHHhhhhhhhhcccccccccccC
Q 014646 5 LVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++.-|+.|.+.|| +||+| .++++.+..++.+.++-.+++ ....++.-.+.+++.......-.++..|+.
T Consensus 62 Ai~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT 141 (467)
T COG2211 62 AITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEIT 141 (467)
T ss_pred HHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhc
Confidence 3456888999996 67655 578888888888888877763 344566778889999999988999999998
Q ss_pred C-CCCchhHHHHHHhHHHHHhHHHHHHHHHhhc-------ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCccccc
Q 014646 74 P-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+ ++||.+..++-+.+.++|..+...+...+.. ..||+..-.+.++++.+..+.+++-..|...+..+.++.
T Consensus 142 ~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~- 220 (467)
T COG2211 142 QDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG- 220 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc-
Confidence 6 6789999999999999997776666555442 458999999998888888888877765533211111100
Q ss_pred chhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHH
Q 014646 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
...+..+.+..+++|+.+...++..++.....+....
T Consensus 221 -------------------------------------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s 257 (467)
T COG2211 221 -------------------------------------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGS 257 (467)
T ss_pred -------------------------------------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhh
Confidence 0011123456778999999988888887777777777
Q ss_pred HhhhHHHHhhccchhhHHHH-hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc--hhHHHHH
Q 014646 226 WGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLA 302 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 302 (421)
....|.+...+.++...... .....+.+++.++..++.+|+|+| +....+.++..+..+...+.+ +....++
T Consensus 258 ~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~ 332 (467)
T COG2211 258 IMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIGLLLLAVGYLLLYFTPAGSVVLIVV 332 (467)
T ss_pred hhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 77777777666665444333 344455566688999999999999 777777777777666655554 4555555
Q ss_pred HHHHHHHHHhccccchhhhhhcccCc-------chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
..++.+.+.+...+..+++++|.+.- +.-|...|.++.+.- +|..++..+.|++.+..|
T Consensus 333 ~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K-~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 333 ALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRK-LGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHH-HHHHHHHHHHHHHHHHcC
Confidence 55677777777777777777775432 245666777744444 488888888899888765
No 116
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=2.8e-17 Score=142.04 Aligned_cols=312 Identities=14% Similarity=0.110 Sum_probs=209.7
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc------hhH--HHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF------DFW--SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+....+++-|+.||+|-|...+++.++..+|+.+-..+. .++ ....+..+.+.++-.....-..+-.-|+++
T Consensus 92 ~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~ 171 (480)
T KOG2563|consen 92 SVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPP 171 (480)
T ss_pred HHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCc
Confidence 445667788999999999999999999999999876653 345 667888999988887777667788889999
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcc------cchhH--HHHHhHHHHHHHHHHHHhcccccccccCCcccccch
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------LNWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 147 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------~gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (421)
+||..+..+-..+..+|.++|.++...+..+ ..|.. .|+..+.+..+..++..+..++.++. ++......
T Consensus 172 ~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~ 249 (480)
T KOG2563|consen 172 DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAA 249 (480)
T ss_pred chhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhh
Confidence 9999999999999999999999998888753 24654 35544444444444444444432222 11111110
Q ss_pred hhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHh
Q 014646 148 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
.+..++.++.+..++|+++....+.+......+++..+.+
T Consensus 250 ----------------------------------------~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l 289 (480)
T KOG2563|consen 250 ----------------------------------------LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLL 289 (480)
T ss_pred ----------------------------------------hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHh
Confidence 0011235678899999999998888877777777777766
Q ss_pred hhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHH-HHHHHh---hchhHHHHHH
Q 014646 228 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFC---LSSLYGFLAL 303 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~ 303 (421)
...+...+-.+........+..+++++++++.|.+.||.++-+ ............. +.+... ....+.+...
T Consensus 290 ~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t 365 (480)
T KOG2563|consen 290 NLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTT 365 (480)
T ss_pred hhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhh
Confidence 6444332222222334556677889999999999999987642 2222222222222 111111 2233444555
Q ss_pred HHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
..+.+++.....|...-+..|..-|..-++..|+.+...+.++.. -.++.+...+..+
T Consensus 366 ~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~-~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 366 CGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI-LVFIMGILAEDLG 423 (480)
T ss_pred HHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH-HHHHHHHHhhccC
Confidence 566677777778877888888877877788888888877776644 3556666666554
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.77 E-value=1.7e-16 Score=139.71 Aligned_cols=374 Identities=11% Similarity=0.086 Sum_probs=210.9
Q ss_pred chhhHHHhhhhhc-CchHHHHHHHHHHHHHHhhhcccc--hhHHHHHHHHHhhhhhhhhcccccccccccCCCC--Cchh
Q 014646 6 VASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP--QKTA 80 (421)
Q Consensus 6 ~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~ 80 (421)
+..+++|+++||+ |+|+++..|.++.++|.++.+.++ +...++++-.+.++|.|..-+...++++|.+|++ +|-.
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~ 155 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDG 155 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCC
Confidence 3567899999995 999999999999999999999984 7889999999999999999999999999999864 4777
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccC
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
.+++++.+.++|+.++|++.+++.+++||+..|.+.++-.....+..+.. ++.......++++...............-
T Consensus 156 gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (498)
T COG3104 156 GFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG-RRHVKGIGGVPDPNPLSFNFLLPVLGGLV 234 (498)
T ss_pred CccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-cchhcCCCCCCCccchhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999887665554444433 43332222111111111000000000000
Q ss_pred CC--ccc-cccchhhhhhhhhcccccchhhhhhhhhh------hhhHhhhc-hhhHHHHHHHHHHHHHHHHHHHHHhhhH
Q 014646 161 LN--DHV-SEDISDQASERSIKSIGESRFLNQLSQFS------QDTKVLLQ-EKVYVVNVLGYIAYNFVIGAYSYWGPKA 230 (421)
Q Consensus 161 ~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (421)
.. ... ......+..........-........+.. +..++++. -+.+....+.+.++......+..|....
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~ 314 (498)
T COG3104 235 VMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRN 314 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHh
Confidence 00 000 00000000000000000000000000000 00111100 0111111222222222233333333333
Q ss_pred HHHh-hccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccc--cc-hhhHHHHHHHHHHHHHHHHHh----h-----chh
Q 014646 231 GYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATI--SN-AFKLLSAATFLGAISCLTAFC----L-----SSL 297 (421)
Q Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~----~-----~~~ 297 (421)
.++. ++.+.....+.++..+.-++.+++..++..|.+++. ++ ..+.-....+.+...+++... . .+.
T Consensus 315 v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~ 394 (498)
T COG3104 315 VNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSV 394 (498)
T ss_pred hcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH
Confidence 3333 334444455666667777777777778877755442 22 223333333333333322222 1 145
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHH------hhhhhhchhhhhhHH
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV------LQDHVNNWRKTTLAL 371 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~------l~~~~~~~~~~~~~~ 371 (421)
+..+....+..++.-+..+.....+.+..|+...+..++.. ...+..|..++..+.+. ..+.. .....|..+
T Consensus 395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~w-fLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~ 472 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMW-FLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTI 472 (498)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHH
Confidence 56666777778888788888899999999999999999987 44444465555544442 22222 233456655
Q ss_pred HHHHHHHHHHh
Q 014646 372 TSIFFLAAGIW 382 (421)
Q Consensus 372 ~~~~~~~~~~~ 382 (421)
+...+......
T Consensus 473 g~v~i~~~~~~ 483 (498)
T COG3104 473 GVVAIVIGILL 483 (498)
T ss_pred HHHHHHHHHHH
Confidence 55554444443
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.72 E-value=1.7e-14 Score=124.82 Aligned_cols=305 Identities=14% Similarity=0.056 Sum_probs=203.9
Q ss_pred hhhHHHhhhhhcC-----chHH-HHHHHHHHHHHHhhhccc-----c-------h--hH--HHHHHHHHhhhhhhhhccc
Q 014646 7 ASPIFASLAKSHN-----PFRL-IGVGLSVWTFATAGCGSS-----F-------D--FW--SIAICRMLVGVGEASFISL 64 (421)
Q Consensus 7 ~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~-----~-------~--~~--~l~~~r~l~G~~~~~~~~~ 64 (421)
..+.+|+.+|+.+ ||.. +..|.++...+..+..++ . + .+ ...+.-.+.|+|.+...+.
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~ 109 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTS 109 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHH
Confidence 4678999999998 7765 455566655555554432 2 1 22 2344567789999999999
Q ss_pred ccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHh---HHHHHHHHHHHHhcccccccccCCc
Q 014646 65 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE---AILMLPFAVLAFVIKPLQLKGFAPA 141 (421)
Q Consensus 65 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~---~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (421)
..+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.++-.-..-+. +++.+...++..+- .|.+.....+
T Consensus 110 ~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg-~E~r~~~~~~ 188 (403)
T PF03209_consen 110 FLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG-QEPRRSRRAA 188 (403)
T ss_pred HHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cccCCccccc
Confidence 9999999999999999999999999999999999999888766533222222 22222222222222 2211110000
Q ss_pred ccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHH
Q 014646 142 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 221 (421)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 221 (421)
.++ ++...+.+.++++..+|.........+.....++
T Consensus 189 ~~~-------------------------------------------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~ 225 (403)
T PF03209_consen 189 AAE-------------------------------------------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFF 225 (403)
T ss_pred CCC-------------------------------------------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 000 0011223456677788888887777777777777
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHh-hcccccchhhHHHHHHHHHHHH---HHHHHhhch
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAIS---CLTAFCLSS 296 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 296 (421)
.-...+-.|.-+.++.+..+. .+......+..++....+++..| .+++ +.....+..+..+ ........+
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~~a~~G~~~~~~~f~lii~a~~~~~ 300 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----RTAALGCLLGALAFALIILAGPLGS 300 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 777788889999999996544 66677778888888888888774 3333 3333333333332 233334457
Q ss_pred hHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 297 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+.+.....+.|++.+.......+.+.+...+++.|..+|.-. ..+..+..++..+.|.+.|..
T Consensus 301 ~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WG-aaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 301 PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWG-AAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888899888888888888999998899999999984 444447777787888887754
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.69 E-value=3e-15 Score=135.40 Aligned_cols=314 Identities=13% Similarity=0.112 Sum_probs=210.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhh--hhhhcccccccccccCCCCCchhH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG--EASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
..+.++..|.++||+|||..+.+..+...+..++..+.. +|.+ + +.|+. .+.......++++|....++|...
T Consensus 75 ~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~-~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~ 149 (463)
T KOG2816|consen 75 TLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFF-L---LLGLSGGFSAIFSVGFAYVADISSEEERSSS 149 (463)
T ss_pred HHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHh-h---hcccccchhhhhhhhhhheeeccchhHHHHH
Confidence 456788999999999999999999999888888777766 3333 3 55543 345677788999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.......+..++|.+++.+....|.-.+|.+..+..++..+..++..||+......++ .... +......
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~-------~~~~~~~ 221 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLR-------ELTPGSL 221 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-cccc-------ccCCCcc
Confidence 9999999999999999999999999999999999999988888888888898765432221 0000 0000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHH-HHHHHHhhhHHHHhhccchh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI-GAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (421)
.. ....+..+..+..-.+|..+.+.+..+...... ....-..+.|+...+++++.
T Consensus 222 -------~~-----------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~ 277 (463)
T KOG2816|consen 222 -------DS-----------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKK 277 (463)
T ss_pred -------cc-----------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHH
Confidence 00 000011111111112344444343333333322 22221446778888888876
Q ss_pred hHH-HHhhHhHHHHHHHhHHH-HHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 241 DMM-FGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... +.+.......++.++.. .+...++.+ +.+..+...-........+..+.|....... .........+..
T Consensus 278 ~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v-~~~~~~~~~pa~ 351 (463)
T KOG2816|consen 278 EFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGV-VVALAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHH-HHHhhcchhHHH
Confidence 653 45556666667766655 677778877 6555555555555566666666665444433 334445666777
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+.....+.++.+|++.++....... ...++|.+.+.+...+
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALT 393 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHH
Confidence 88888889999999999999655555 7788898888886554
No 120
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=1.9e-16 Score=122.18 Aligned_cols=132 Identities=30% Similarity=0.386 Sum_probs=120.7
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+.+.+++.|++.+...+....++.|.+|+++|++.
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 45677889999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
+++.+....+|..+++.+++.+.+..+|++.+++.++..++..+..++..||
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999998999999999988877777776666554
No 121
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.63 E-value=2.8e-13 Score=118.75 Aligned_cols=327 Identities=11% Similarity=0.005 Sum_probs=214.0
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+....++...+.|..|.|++++++.+...+...+.-+.++...+-+..+.-|++.+. ..+-++++-...|+++-.++.+
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts 132 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTS 132 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHH
Confidence 456678889999999999999999999999999999999999999999999999985 6677889999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 84 MFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
...++..+|..++.++|..+.. ..+.+..+++......+..++.+++ |..++..--+++.+.... ..+.+.++.
T Consensus 133 ~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL-P~~~~S~~f~r~~~~~~~---~~~~~~~~~ 208 (412)
T PF01770_consen 133 YTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL-PMPKRSLFFHRKPPAEQD---ANESESDKM 208 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCcccceeccCccccc---ccccccccc
Confidence 9999999999999999998875 4456666666655444444444444 442221100010000000 000000000
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
++..++. .+.++.+...+.......+..++++++..++|.++...+-+.+...+++.+.+|.....++....+...
T Consensus 209 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~ 284 (412)
T PF01770_consen 209 NESPESS----SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNES 284 (412)
T ss_pred ccccccc----cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCc
Confidence 0000000 011111111122222455667788888899999999999888888888888888877776661111111
Q ss_pred ---HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 242 ---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
...-+...+.+.++.+..|++-.++.+.. ...+....++.+..++++...++.|...+...+.........+..
T Consensus 285 vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~---~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 285 VYNGAVEAASTLLGAIAALLAGYVKVNWDRWG---ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHhhcchHHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334555666677777787744443321 133445555566666677777888888877777777766666666
Q ss_pred hhhhhcccCcchhHHHHHHHHHHH
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSI 342 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~ 342 (421)
..-++.....+.-+...|++++..
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHHH
Confidence 666777776777777777774433
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.56 E-value=1.5e-13 Score=125.36 Aligned_cols=318 Identities=13% Similarity=0.085 Sum_probs=186.3
Q ss_pred hhhHHHhhhhhc-----CchHHHHHHHHHHHHHHhhhccc----chhHHHHHHHHHhhhhhhhhcccccccccccCC--C
Q 014646 7 ASPIFASLAKSH-----NPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAP--V 75 (421)
Q Consensus 7 ~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~ 75 (421)
.-+++|.++|-+ .||+-++++.++..++.+..+.. .+.....+.-++..+|.+.....+-+++.|... +
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p 119 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREP 119 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Confidence 347899999986 35556777777776655555543 356666777788889999999999999999874 3
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhccccc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+..+++.+|. +.++..+.....
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~-~~~~~~~~~~~~-------- 190 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER-KVRPADEVFSFG-------- 190 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc-cccccchhhccc--------
Confidence 44788889999999999999999999999999999999999888777776666665551 111000000000
Q ss_pred ccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHH-HHHHHHHHHHHHHHHhhhHHHHh
Q 014646 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
++..+ ......++.....++.++.+.++...+ ..++............-.+..+.
T Consensus 191 -----------~~~~~-------------~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~ 246 (433)
T PF03092_consen 191 -----------KEEVP-------------CLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDA 246 (433)
T ss_pred -----------ccccc-------------hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecc
Confidence 00000 000112233345566677777776555 22222221111000000011122
Q ss_pred hc---cchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-h---------hchhHHHH
Q 014646 235 YH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-C---------LSSLYGFL 301 (421)
Q Consensus 235 ~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~ 301 (421)
.+ +++ ..++.+. +.+.++.+++..+-+++.++... |+++....++.....+.-. . .++.+..+
T Consensus 247 ~~gp~fs~--~f~~~~~-~vg~~~~l~g~~~y~~~~~~~~~-R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 247 LGGPHFSP--SFYGTLS-IVGSIASLLGILLYRKYFSNWSW-RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred ccccccCH--HHHHHHH-HHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 22 332 2222222 33444445555555555443221 2444444443333322111 0 11222233
Q ss_pred HHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
.-..+........+.|....+.+..|+..-|+..++.....+. |..++..+...+.+..+
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVSSTLGAFLMELFG 382 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 3344455556666777888899999999999999999777676 87888877777776655
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.50 E-value=8.9e-14 Score=127.21 Aligned_cols=131 Identities=17% Similarity=0.253 Sum_probs=113.6
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc----hhHHHHHHHHHhhhhhhhhcccccccccccCCCCCch
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.+++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+....++.|++|+++|+
T Consensus 264 ~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g 343 (418)
T TIGR00889 264 EIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRA 343 (418)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 456678999999999999999999999988876666532 3466778999999999988888899999999999999
Q ss_pred hHHHHHH-hHHHHHhHHHHHHHHHhhcc------cchhHHHHHhHHHHHHHHHHHHhccccc
Q 014646 80 AWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 80 ~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
+++++.+ ...++|.++||.++|.+.++ +||+..|++.+++.++..++.+++.||+
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999997 67889999999999999886 4699999999999888888888877764
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=5.6e-14 Score=134.62 Aligned_cols=132 Identities=10% Similarity=-0.015 Sum_probs=114.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+..++...++++|++|.++|+++
T Consensus 606 l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta 685 (742)
T TIGR01299 606 LAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATA 685 (742)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 35577899999999999999999999999999999999999888888899999998888899999999999999999999
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccc
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
+|+.+....+|.+++|.+++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 686 ~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 686 FGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 9999999999999999999988764 4567888887777666555554 47743
No 125
>PRK10054 putative transporter; Provisional
Probab=99.48 E-value=2.7e-12 Score=116.82 Aligned_cols=169 Identities=9% Similarity=0.009 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++.+.+..++...+......++|.|+++.++.+..+. ...+...+..+++.+..|+++||+||| +.+..+.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~ 81 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT 81 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence 446666677788888888888999999998888887555 334566778888999999999999998 66666666
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
...+..+.....++.+..++...+.+...+...+....+..|..|+++|+++.|+.+...+. |..++|.+.+.+.+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~- 158 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-Q- 158 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-h-
Confidence 56555555555666655555444555555555566777888999999999999999777776 88999999998875 3
Q ss_pred chhhhhhHHHHHHHHHHH
Q 014646 363 NWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (421)
+++..|...+++.++..+
T Consensus 159 g~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 159 SINLPFWLAAICSAFPLV 176 (395)
T ss_pred ccCcHHHHHHHHHHHHHH
Confidence 477788776665555433
No 126
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.47 E-value=1.2e-12 Score=117.09 Aligned_cols=336 Identities=14% Similarity=0.156 Sum_probs=194.1
Q ss_pred ccccchhhHHHhhhhhcCc-hHHHHHHHHHHHHHHhhh-cc---cc-hhHHHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 2 VGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGC-GS---SF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+|.+++++..|+...|.+. |+.++.+.++..++.++. ++ .+ ..+.++++|++.|+|.+ ......+|+++....
T Consensus 82 lg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 82 LGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTV 160 (488)
T ss_pred HHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCc
Confidence 4678899999999999986 888899999999999988 33 23 67889999999999988 455778999999888
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcc----------c---chhHHHHHhHHHHHHHHHHHHhcccccccccCCcc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 142 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 142 (421)
++|.|+++....+..+|.++||.+...+..- . -+-.+-|+.+++.++..+...+...|..+...+.+
T Consensus 161 ~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~ 240 (488)
T KOG2325|consen 161 EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKK 240 (488)
T ss_pred cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccc
Confidence 8999999999999999999999887665421 1 13355677777777777777777666544321111
Q ss_pred cccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhh-hchhhHHHHHHHHHHHHHHHH
Q 014646 143 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL-LQEKVYVVNVLGYIAYNFVIG 221 (421)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 221 (421)
.++.. +++.+.. ..+.. +.....+...+..+...+...
T Consensus 241 ~~~~~-----------------------~~~~~~~------------------~~~~~~~d~~~~~vc~~~~~~~~~~~~ 279 (488)
T KOG2325|consen 241 KRSVE-----------------------EEKSDIE------------------KVKKPKLDWVAVLVCIFLRFVVNFIAT 279 (488)
T ss_pred cccch-----------------------hhccchh------------------hhccCChhHHHHHHHHHHHHHHHHHHH
Confidence 11000 0000000 00000 111222333334455555555
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHH-hhHhHHHHHHHh-HHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh---hc
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFG-GVTIVCGIVGTI-SGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS 295 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 295 (421)
...+..+.+....++++.... ... ....+.+++... ...+..-|+++.-.+ ..+...+........+.... ..
T Consensus 280 ~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r-~~~~~g~l~~f~~~~i~~yp~~~~s 358 (488)
T KOG2325|consen 280 TIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKR-RIILLGFLIFFLSYYIFTYPWGFYS 358 (488)
T ss_pred HHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccc-eeeeehHHHHHHhhheeeeeccccc
Confidence 555666666666677664333 222 223333333222 333333443331100 02222222222222111110 00
Q ss_pred ---------------------------hhHHHHHH-HHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhcc
Q 014646 296 ---------------------------SLYGFLAL-FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 347 (421)
Q Consensus 296 ---------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~ 347 (421)
+.+.+++. ..+.+...-.......+..++...|+++++..+++. ..+..+.
T Consensus 359 ~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~-~~~s~~~ 437 (488)
T KOG2325|consen 359 GPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFS-ISGSIAR 437 (488)
T ss_pred cccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEE-eccchhh
Confidence 01111111 111222222334457888899999999999999995 4444488
Q ss_pred CCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 348 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 348 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.++|.+...+....| +++.+.+.....++...++
T Consensus 438 ~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 438 VVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALW 471 (488)
T ss_pred hhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHH
Confidence 889888877777766 6566665555544444443
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.46 E-value=4.9e-13 Score=125.25 Aligned_cols=136 Identities=10% Similarity=0.003 Sum_probs=100.8
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhh---hcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++..++.++.|+++||+|||+++..+.++..++... ...+++...+++++++.|++.+........++.|.+|++.|
T Consensus 297 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~R 376 (490)
T PRK10642 297 IGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIR 376 (490)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 456678889999999999999988887654433322 22345677788899999988777777777888999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHHhhccc-chhHHHHHhHHHHHHHHHHHHhccccccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 138 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 138 (421)
++++++......++..++|.+.+++.+.. +|+.+++...+++++..+..+ +.||++++.
T Consensus 377 g~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~ 436 (490)
T PRK10642 377 YSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRP 436 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCC
Confidence 99999754445566678888888887654 478777777666665555544 448887664
No 128
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.46 E-value=6.7e-12 Score=115.84 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.+....+.+++.......+..+.|.+.++ .+.+..+. .......++..++.++.|++.||+|+| +.+..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence 334444555555555555667778887766 67775554 445677788899999999999999998 77777777
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..++....++.+...+...+.+++.+...+....++.+.+|+++|++++++.+...+. |..++|.+.+++.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 76666666666666666666666677777777788888999999999999999999766665 88999999999998766
Q ss_pred chhhhhhHHHHHHHHH
Q 014646 363 NWRKTTLALTSIFFLA 378 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~ 378 (421)
|+..+...++..++.
T Consensus 176 -w~~~f~~~~i~~~~~ 190 (434)
T PRK11663 176 -WRYGMMIAGIIAIVV 190 (434)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 888887766554433
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.44 E-value=5.2e-13 Score=122.14 Aligned_cols=129 Identities=17% Similarity=0.168 Sum_probs=114.5
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|.+|+++|++++
T Consensus 261 ~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (399)
T PRK05122 261 AFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAAL 340 (399)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 45678899999999999999999999988888888888888888888999999999988888888888999999999999
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcc
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
++++....+|..+++.+.+.+.+..||++.|++.+++.++..++.++..
T Consensus 341 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 341 GAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999989999999999888777666655543
No 130
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.43 E-value=2.7e-12 Score=115.93 Aligned_cols=164 Identities=8% Similarity=-0.043 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
....++...........+|.|..+....+.......+...++..++.++.|+++||+||| +.+..+..+......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLVA 79 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHHH
Confidence 344455555666666777888777443333333455677788899999999999999998 776666555554444
Q ss_pred HHHhhc-----hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch
Q 014646 290 TAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 290 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 364 (421)
...... +.+...+...+.+++.+...+....++.|..|+++|++++++.+..... |.+++|.+.+.+.+..+ |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g-~ 157 (365)
T TIGR00900 80 VLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG-I 157 (365)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-H
Confidence 433333 6666677777778888888888899999999999999999999766665 88999999999988766 7
Q ss_pred hhhhhHHHHHHHHHHH
Q 014646 365 RKTTLALTSIFFLAAG 380 (421)
Q Consensus 365 ~~~~~~~~~~~~~~~~ 380 (421)
+..+++.+...++...
T Consensus 158 ~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 158 KWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766555444433
No 131
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.42 E-value=7.6e-12 Score=112.43 Aligned_cols=164 Identities=16% Similarity=0.147 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 211 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
+..++............|.++.+.++.+..+. ...+...++..++.++.|+++||+||| +.+..+..+..+..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHH
Confidence 33455555566666677756666677665554 445677788899999999999999998 777666666666644
Q ss_pred HHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhh
Q 014646 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 369 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 369 (421)
...+.++.+..++..++.+++.+...+....++.+.+|+++|++++++.+..... |..++|.+.+.+.+..+ |+..++
T Consensus 78 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~ 155 (352)
T PF07690_consen 78 LLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFL 155 (352)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHH
T ss_pred HhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-cccccc
Confidence 4333366667777778888888888888999999999999999999999766665 88999999999997765 878888
Q ss_pred HHHHHHHHHHHH
Q 014646 370 ALTSIFFLAAGI 381 (421)
Q Consensus 370 ~~~~~~~~~~~~ 381 (421)
+.+...++..++
T Consensus 156 ~~~~~~~~~~il 167 (352)
T PF07690_consen 156 ISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHH
T ss_pred cccchhhhhhhh
Confidence 887776666553
No 132
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.41 E-value=9.3e-12 Score=115.65 Aligned_cols=172 Identities=11% Similarity=-0.052 Sum_probs=129.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHh--hccchhhH-HHHhhHhHHHHHHHhHHHHHHHh-hcccccchhhHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 279 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 279 (421)
+.++.+.+..++..+.+++...++|.|+++. .|.+..+. .......+...++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 4455556666777888899999999999887 67776444 44466778889999999999999 8998 77777
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcc---hhHHHHHHHHHHHHHhccCCchhHHHH
Q 014646 280 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
+..+..+..++....++.+...+...+.+.+.+...+.......+.+|++ .|+++.++.+...+. |..+||.+.++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 77777666666555555555555556667777777777888888888775 488899998777777 99999999999
Q ss_pred hhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 357 LQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 357 l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
+.++.+ |+..|...+...+++.+.+
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHHH
Confidence 998766 8788877765555444433
No 133
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=6.6e-12 Score=108.55 Aligned_cols=174 Identities=17% Similarity=0.183 Sum_probs=144.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHH
Q 014646 202 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 280 (421)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 280 (421)
|.+.+..+.+.+..+++.-..+..-.|...++ .+.+..+. .+.+...+..-++-++.|.++||.+.| ..+...
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHH
Confidence 44556666777777777777777777766555 55776555 455788899999999999999999998 888888
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHH--HHhh
Q 014646 281 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQ 358 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--g~l~ 358 (421)
.+++++..+++.+.++.+.+.++..+.+.+.+..+|++...+.+-+++++||+..++-|+..+. |+.+.|++. +++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHH
Confidence 8888888888888889999999999999999999999999999999999999999999988888 778788888 8888
Q ss_pred hhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 359 DHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++. +|+..|++-+++.++..++.+
T Consensus 180 ~~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 180 FHG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred hcc-chhHHHHHHHHHHHHHHHHHH
Confidence 775 598999998887766665544
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.40 E-value=8.6e-12 Score=114.72 Aligned_cols=179 Identities=15% Similarity=0.029 Sum_probs=122.3
Q ss_pred hhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchh
Q 014646 195 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAF 274 (421)
Q Consensus 195 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 274 (421)
.+++.+.++|.++...+..++............|.+.++..+.............++..++.++.|+++||++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~----- 82 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRK----- 82 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCc-----
Confidence 345556678888887777777777777777888888877554333333555677788899999999999999998
Q ss_pred hHHHHHHHHHHHHHHHH-----HhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCC
Q 014646 275 KLLSAATFLGAISCLTA-----FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
+.+.....+..+..... ...++.+...+...+.+++.+...++....+.+.+|+++|+++.++.+...+. |..+
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 161 (417)
T PRK10489 83 KLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL-GSVI 161 (417)
T ss_pred eEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH-HHHh
Confidence 44433333322222211 11234444555555566666666677788888999999999999998655555 8899
Q ss_pred chhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 350 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 350 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
||.+.+.+.+..+ +++.+++.+...++..+
T Consensus 162 g~~l~g~l~~~~~-~~~~~~~~~~~~~~~~~ 191 (417)
T PRK10489 162 SPALGGLLIAAGG-VAWNYGLAAAGTFITLL 191 (417)
T ss_pred HHHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Confidence 9999999988755 66677665555444433
No 135
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.40 E-value=1.8e-11 Score=112.09 Aligned_cols=174 Identities=13% Similarity=0.011 Sum_probs=122.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhh-cccccchhhHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA 280 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 280 (421)
.+.++..........+.++++..++|.|+.+..+.++... ...........++.+++|+++||+ ||| +.+..+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence 3445555666677788889999999999998888886555 344555677788899999999999 998 666666
Q ss_pred HHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHhccccchhhhhhcccCcc--hhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 281 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.++..+..+++...+ +.........+...+.+...+...++..|.+|++ .|.++.++.+...+. |+.++|.+.+++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence 655555544333222 1122232333333444555566678889999875 799999999888886 889999999999
Q ss_pred hhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 358 QDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+..| |+..|...++.++++.+.++
T Consensus 162 ~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 88766 88888877665555554443
No 136
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=1.2e-12 Score=120.21 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=114.7
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+..|+++|++.++
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFS 350 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeeh
Confidence 44667788999999999999999998888888888888888889999999999999999988889999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcc
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+.+....+|..+||.+++.+.+..||++.|++.+++.++..+..++..
T Consensus 351 ~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 351 YNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988887777666543
No 137
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.38 E-value=3.7e-11 Score=102.69 Aligned_cols=215 Identities=13% Similarity=0.116 Sum_probs=135.1
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhccccccc-ccccCCC----CC
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF-IDDNAPV----PQ 77 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~----~~ 77 (421)
..++..++.|.++||+|||+.-++-+++.+++++ +-.+++++.++++|++.|++.+....+-.++ +.|+-.. +.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~ 159 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW 159 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 4567788999999999999999999999999886 4566899999999999999999888877765 4555322 22
Q ss_pred chhHHHHHH-hHHHHHhHHHHHHHHHhhcccch--hHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccc
Q 014646 78 KTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 78 r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
.+..++... ..+++-.+.+.+++..+.+..+. ..+|.....+.++..++.....+|.... +++.+
T Consensus 160 L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~---~~~~~--------- 227 (354)
T PF05631_consen 160 LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD---TSSSS--------- 227 (354)
T ss_pred HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC---ccccc---------
Confidence 233333333 22333445566666666665544 7888888777666666555443443211 01100
Q ss_pred cccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHH-HHhhhHHHH
Q 014646 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGPKAGYN 233 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (421)
+..++..+.++.+.++|+++.+.+...++-...+.+. .|.|..-.+
T Consensus 228 ---------------------------------~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~ 274 (354)
T PF05631_consen 228 ---------------------------------SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD 274 (354)
T ss_pred ---------------------------------chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC
Confidence 0011122346677888999988888877766665554 577765511
Q ss_pred hhccchhhHHHHhhHhHHHHHHHhHHHHHHHh
Q 014646 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQ 265 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 265 (421)
...-|....+ +...++.++|+.+..++..+
T Consensus 275 -~~~~P~GlIF-ssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 275 -DEELPLGLIF-SSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred -CCCCCchHHH-HHHHHHHHHHHHHHHHHHhC
Confidence 1111222222 34456666777666555443
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.38 E-value=8e-13 Score=121.60 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=113.2
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....++.|.+|++.|+...
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~ 353 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIY 353 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeee
Confidence 34578899999999999999999999999999899999999999999999999999888888888999999999888876
Q ss_pred HH-HHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcc
Q 014646 83 SM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 83 ~~-~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+. ++....+|.++++.+.|++.+..||+..|.+.+++.++..++.++..
T Consensus 354 ~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 354 LVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 55 67778899999999999999999999999999888777666665554
No 139
>PRK12382 putative transporter; Provisional
Probab=99.38 E-value=1.3e-12 Score=119.24 Aligned_cols=128 Identities=12% Similarity=0.109 Sum_probs=115.1
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+..+++++.|++.||+|+|+.+..+..+.+++.++..++++.+.+++..++.|++.+...+.....+.|.+|+++|++++
T Consensus 261 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (392)
T PRK12382 261 AFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTAL 340 (392)
T ss_pred HHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHH
Confidence 45678899999999999999999999999998888888888888888999999999988888888889999999999999
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++++....+|..++|.+.+.+.++.||+..|.+.+++.++..++.++.
T Consensus 341 g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 341 GGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998877766665544
No 140
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.37 E-value=3.7e-11 Score=109.60 Aligned_cols=165 Identities=14% Similarity=0.057 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHH
Q 014646 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
+......++.....+....++|.|+++..+.+.....+ .....+...+..++.|+++||++|| +.+..+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~ 87 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHH
Confidence 33445566777777788888999988888888655533 3555667777789999999999998 77777777777
Q ss_pred HHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchh
Q 014646 286 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 365 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 365 (421)
+..+.....++.+...+...+.+++.+...++..+.+.+.+|+++|++++|+.+...+. |..+||.+.+++. ..+ |+
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~-~~g-~~ 164 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLL-QYD-FR 164 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hhh-HH
Confidence 77666666667766666666677776666677788889999999999999999766666 8899999999998 444 77
Q ss_pred hhhhHHHHHHHHHH
Q 014646 366 KTTLALTSIFFLAA 379 (421)
Q Consensus 366 ~~~~~~~~~~~~~~ 379 (421)
..+++.+...++..
T Consensus 165 ~~f~~~~~~~~~~~ 178 (400)
T PRK11646 165 LVCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777665544443
No 141
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.36 E-value=3.7e-11 Score=111.09 Aligned_cols=172 Identities=17% Similarity=0.139 Sum_probs=112.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHH
Q 014646 202 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 280 (421)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 280 (421)
+++.++...+.+.........+....|.+ ++. +.++.+. .......++..++.++.|+++||+||| +.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VEQ-GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HHc-CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHH
Confidence 34444444444444444444455556644 443 7776555 444677788899999999999999998 555555
Q ss_pred HHHHHHHHHHHHhh----chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHH
Q 014646 281 TFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 281 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
.++..+..+..... .+.+...+...+.+++.+..+++....+.+.+|+++|++++++.+..... |..+++.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHH
Confidence 44444444333222 23334444555666777777777788888999999999999999766666 77778877776
Q ss_pred hhhhhhchhhhhhHHHHHHHHHHHH
Q 014646 357 LQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 357 l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (421)
..+...+|+..|+..+...++..+.
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~~ 201 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVALF 201 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 5554445888888877665554433
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=1.5e-11 Score=112.42 Aligned_cols=153 Identities=17% Similarity=0.157 Sum_probs=114.8
Q ss_pred HHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHH
Q 014646 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 299 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (421)
..+....|. +.+.++.+.... .......++..++.++.|++.||+||| +.+..+..+..+........++.+.
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----KTLAVFIVIWGVFTGLQAFAGAYVS 84 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----eeeHHHHHHHHHHHHHHHHHcCHHH
Confidence 344444555 455567765444 445777888899999999999999998 6666666666655555555667777
Q ss_pred HHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
..+...+.+++.+...+....++.|.+|+++|++++++.+...+. |..++|.+.+.+.+..+ |+..+...+...++..
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGL-GGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHH
Confidence 777888888888888888899999999999999999999766555 88999999998888766 7777777666554444
Q ss_pred HH
Q 014646 380 GI 381 (421)
Q Consensus 380 ~~ 381 (421)
+.
T Consensus 163 ~~ 164 (399)
T TIGR00893 163 VL 164 (399)
T ss_pred HH
Confidence 43
No 143
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=4e-11 Score=109.99 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.+....+.++.............|.+. +.++.+..+. ...+...++..++.++.|+++||+||| +.+..+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~~ 85 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR-----LPMVTSIV 85 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHH
Confidence 3344445555555555556666666554 5577775554 445677788899999999999999998 77766666
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..+.....++.+..++...+.+.+.+...+....++.|..|+++|+++.++.+..... |.++++.+.+.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAV-GAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 66666666656667777777777888888888888888999999999999999999665555 88889988888887654
Q ss_pred -chhhhhhHHHH
Q 014646 363 -NWRKTTLALTS 373 (421)
Q Consensus 363 -~~~~~~~~~~~ 373 (421)
+|+..+.+.+.
T Consensus 165 ~~w~~~f~~~~~ 176 (405)
T TIGR00891 165 DGWRALFFISIL 176 (405)
T ss_pred ccHHHHHHHHHH
Confidence 36666655433
No 144
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.34 E-value=4.1e-11 Score=109.73 Aligned_cols=167 Identities=10% Similarity=0.038 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+....+.+.+............| .+++.++.+..+. ...+...++..++.+..|++.||+||| +.+....++.
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~ 83 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLW 83 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHH
Confidence 33344444444444444555555 5666778876555 445777788899999999999999999 7777777776
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh----
Q 014646 285 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH---- 360 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~---- 360 (421)
.+..+.....++.+.+.+.-.+.+++.+...+....++.+.+|+++|++++++.+..... |..+++.+.+++.+.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCC
Confidence 666666666677777777777788888877777777888989999999999999766665 888999898888752
Q ss_pred -hhchhhhhhHHHHHHHHHH
Q 014646 361 -VNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 361 -~~~~~~~~~~~~~~~~~~~ 379 (421)
..+|+..|++.+...++..
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~ 182 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILG 182 (412)
T ss_pred CccchhHHHHHHHHHHHHHH
Confidence 1248888887665544433
No 145
>PRK10504 putative transporter; Provisional
Probab=99.34 E-value=8.3e-11 Score=110.09 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=126.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++...+..++.....+.+..+.|.+.++ .+.++... .......++..++.++.|+++||+||| +.+.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence 456666777777777777888889998876 66775444 344556677788999999999999998 66665555
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+.....+.....++.+.+++..++.+++.+...+.....+.+.+|+++|+++.++.+...+. |..++|.+.|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence 55554444445566666677777788887777777888889999999999999999766665 88999999999999765
Q ss_pred chhhhhhHHHHHHHHHHH
Q 014646 363 NWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (421)
|+..|.+......+...
T Consensus 163 -w~~~f~~~~~~~~l~~~ 179 (471)
T PRK10504 163 -WHWIFLINIPVGIIGAI 179 (471)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 77777776655444443
No 146
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.33 E-value=1.7e-11 Score=111.38 Aligned_cols=158 Identities=16% Similarity=0.131 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH
Q 014646 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (421)
++.......+....|. +.+.++.+..+. ...+...++..++.++.|+++||+||| +.+..+.++..+..++..
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~ 78 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG 78 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence 3444455555666665 445567775444 445777888899999999999999999 777777766666666666
Q ss_pred hhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchh-HHHHhhhhhhchhhhhhHH
Q 014646 293 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-~~g~l~~~~~~~~~~~~~~ 371 (421)
..++.+..++...+.+++.+...+....++.+.+|+++|+++.++.+..... |..++|. +.+.+.+.. +|+..+++.
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (379)
T TIGR00881 79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELY-SWHWVFIVP 156 (379)
T ss_pred HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcC-CchhHHHHH
Confidence 6677777777777788888888888899999999999999999999666555 8888884 555555543 476777666
Q ss_pred HHHHHHHH
Q 014646 372 TSIFFLAA 379 (421)
Q Consensus 372 ~~~~~~~~ 379 (421)
+.+.++..
T Consensus 157 ~~~~~~~~ 164 (379)
T TIGR00881 157 GIIAIIVS 164 (379)
T ss_pred HHHHHHHH
Confidence 65544433
No 147
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=1.5e-10 Score=105.59 Aligned_cols=170 Identities=9% Similarity=0.022 Sum_probs=121.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+..+...+.+++.......+...+|.+.+ .++.+..+. ...+...++..++.++.|++.||+||| +.+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----~~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK-----RQLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHH
Confidence 33444445555555555566667777654 467775554 444667788899999999999999998 77776666
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..++....++.+...+...+.+++.+...+.....+.+.+|+++|+.+.+..+..... |+.++|.+.+.+.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSM-AGMIFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccc
Confidence 66666655555667766666777777777777777788888999888999999988655555 77788888888776544
Q ss_pred chhhhhhHHHHHHHHHHH
Q 014646 363 NWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~ 380 (421)
+|+..+...+...++..+
T Consensus 160 gw~~~f~~~~~~~~~~~~ 177 (394)
T PRK03699 160 EWYWVYACIGLVYVAIFI 177 (394)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 588888776665544433
No 148
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.33 E-value=8.1e-11 Score=109.45 Aligned_cols=174 Identities=13% Similarity=0.010 Sum_probs=125.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHh-hcccccchhhHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA 280 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~ 280 (421)
.+.++..+...+...+.+++...+++.|+++..+.+.... ...........+..+++|+++|| +||| +.+..+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence 3456666666777888899999999999999888886544 33344444555667799999999 9999 777777
Q ss_pred HHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHhccccchhhhhhcccCcc--hhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 281 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.++..+..+......+ .....+...+.+.+.+...+....++.+.+|++ +|+.+.++.+...+. |..++|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence 7766666555544433 222334556667777777888889999999886 457788888777777 889999999999
Q ss_pred hhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 358 QDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.++.| |++.|++..+....+.+.+.
T Consensus 167 ~~~~g-w~~~F~i~~i~~~~~~~~~~ 191 (489)
T PRK10207 167 ADKFG-YSVTYNLCGAGLIIALLVYF 191 (489)
T ss_pred HHhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 99876 88888776554444443333
No 149
>TIGR00895 2A0115 benzoate transport.
Probab=99.33 E-value=1.6e-11 Score=112.30 Aligned_cols=154 Identities=14% Similarity=0.164 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh
Q 014646 216 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 294 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (421)
..........+.|.+.++ ++.++... .......++..++.++.|+++||+||| +.+..+..+..+..+.....
T Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~ 102 (398)
T TIGR00895 29 DGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALA 102 (398)
T ss_pred HHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHc
Confidence 333344455556665544 66665444 444666788899999999999999998 77766666666666555556
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
++.+...+...+.+++.+...+....+..+.+|+++|++++++.+..... |..+++.+.+++.+..+ |+..+.+.+..
T Consensus 103 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~ 180 (398)
T TIGR00895 103 TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIA 180 (398)
T ss_pred cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhH
Confidence 67776777777777777778888899999999999999999999655555 88999999999988765 76777766444
Q ss_pred HHH
Q 014646 375 FFL 377 (421)
Q Consensus 375 ~~~ 377 (421)
..+
T Consensus 181 ~~~ 183 (398)
T TIGR00895 181 PLL 183 (398)
T ss_pred HHH
Confidence 333
No 150
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=6.9e-11 Score=107.65 Aligned_cols=157 Identities=15% Similarity=0.067 Sum_probs=115.5
Q ss_pred HHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc
Q 014646 217 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (421)
...........|.+.++ .+.++.+. .......++..++.++.|++.||+||| +.+..+..+..+..+.....+
T Consensus 18 ~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHc
Confidence 33444444455655444 66665444 445677788899999999999999998 777777766666666666667
Q ss_pred hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHH
Q 014646 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 375 (421)
+.+...+..++.+++.+...+....++.|.+|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+...
T Consensus 92 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~ 169 (385)
T TIGR00710 92 NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAG 169 (385)
T ss_pred cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 7777777777777777777788888999999999999999999766665 88899999999888765 777777666554
Q ss_pred HHHHHH
Q 014646 376 FLAAGI 381 (421)
Q Consensus 376 ~~~~~~ 381 (421)
++....
T Consensus 170 ~~~~~~ 175 (385)
T TIGR00710 170 ILLSAL 175 (385)
T ss_pred HHHHHH
Confidence 444433
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=1.1e-10 Score=102.11 Aligned_cols=172 Identities=16% Similarity=0.094 Sum_probs=144.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
...+.+.++.|+.....+...-.+|...+| ++.++... ...+.+.++..++.++...+.||+.|| +++.....
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR-----RLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH-----HHHHHHHH
Confidence 345555666677777777777888888777 56665444 556888899999999999999999999 99999999
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..++....++.+..++.=.+.++..+..++....+..+.+|+++|++++++.+..... +.++|.++..++-|.+|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tl-A~v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTL-ATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHH-HHHHhccHHHHHHHHhh
Confidence 99999999998999999999989999999999999999999999999999999999655555 88999999999999988
Q ss_pred chhhhhhHHHHHHHHHHHHhh
Q 014646 363 NWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~ 383 (421)
|+.+|+..+.+.++..+...
T Consensus 166 -WR~~F~~ia~l~ll~~~~~~ 185 (394)
T COG2814 166 -WRATFLAIAVLALLALLLLW 185 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHH
Confidence 99999988877666555443
No 152
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.32 E-value=1.3e-10 Score=108.79 Aligned_cols=176 Identities=11% Similarity=-0.043 Sum_probs=121.3
Q ss_pred hhchh-hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHh-hcccccchhhH
Q 014646 200 LLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL 276 (421)
Q Consensus 200 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 276 (421)
.+++| .++......++..+.++++..+++.|+++..|.+.... ..............+++|+++|| +||| +.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~ 90 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RV 90 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HH
Confidence 34555 47777777788888889999999999999898886544 22222333333445689999999 5998 77
Q ss_pred HHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHhccccchhhhhhcccCcc--hhHHHHHHHHHHHHHhccCCchhH
Q 014646 277 LSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+..+..+..+...+....+ +.+...+...+.+.+.+...+....+..+.+|++ .+..+.++.+...+. |..++|.+
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~i 169 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHHH
Confidence 7666666555544444432 3333444445566666666777778888888764 355678887677777 88999999
Q ss_pred HHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 354 VGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 354 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.|++.++.| |+..|...++...++.+.+
T Consensus 170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 170 TPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 999999876 8888887765555544333
No 153
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.31 E-value=1.3e-10 Score=105.02 Aligned_cols=147 Identities=17% Similarity=0.091 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
++...+..+........+..+.|.++++.++.++... .......++..++.++.|+++||+||| +.+....++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 77 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLLL 77 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 4555566666666677778888877888888887655 445677888999999999999999998 7777666666
Q ss_pred HHHHHHHHhhc-hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 285 AISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 285 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+..+.....+ +.+...+...+.+++.+ ...+...++.+.+|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus 78 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 78 AIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 66666655556 66666666666665543 4456677888999999999999998655444 66667666666554
No 154
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.31 E-value=1e-10 Score=106.45 Aligned_cols=157 Identities=11% Similarity=-0.031 Sum_probs=108.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh-HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
|.++.+.+..++............+...++ .+.++.. ........+...+..++.|+++||++|| +++..+..
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~ 76 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG 76 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence 456666666666666555555555555544 4444333 3445667788899999999999999999 77766666
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..+......+. ++..++.+.+.+...+...+++.|.+|+++|++++|+.+..... +.++||.+.|.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~-~~~~Gp~lgG~l~~~~- 151 (393)
T PRK11195 77 IKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIA-AILLGTVLGGALADPH- 151 (393)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence 555444433333332 33445677788888888899999999999999999999655554 8899999999999853
Q ss_pred chhhhhhHHH
Q 014646 363 NWRKTTLALT 372 (421)
Q Consensus 363 ~~~~~~~~~~ 372 (421)
+...+.+.+
T Consensus 152 -~~~~~~i~~ 160 (393)
T PRK11195 152 -AEAALAVCA 160 (393)
T ss_pred -HHHHHHHHH
Confidence 434444333
No 155
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.29 E-value=1.4e-10 Score=105.93 Aligned_cols=161 Identities=15% Similarity=0.064 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH
Q 014646 213 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 291 (421)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (421)
......+.......+|.+.++ .+.+.... ...+...++..++.++.|+++||+||| +.+..+.....+.....
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHHHHH
Confidence 344444455555667776665 56665444 444666778888999999999999998 77766666666666555
Q ss_pred HhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHH
Q 014646 292 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 371 (421)
...++.+...+...+.+.+.+...+....++.+.+|+++|+++.++.+..... +..++|.+.+.+.+..+ |+..+++.
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 55566665555566666666666677788889999999999999999766555 77888988888777654 76777776
Q ss_pred HHHHHHHHHH
Q 014646 372 TSIFFLAAGI 381 (421)
Q Consensus 372 ~~~~~~~~~~ 381 (421)
+...++...+
T Consensus 164 ~~~~~i~~~~ 173 (392)
T PRK10473 164 AAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHH
Confidence 6554444433
No 156
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.29 E-value=1.6e-10 Score=104.95 Aligned_cols=168 Identities=15% Similarity=0.021 Sum_probs=124.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++...+..+............+|.+.++ ++.+..+. ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence 344555555666666666666777776554 66665444 455777889999999999999999998 77777777
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+..+..++....++.+.+++.-.+.+++.+...+.......+..++++|+++++........ |..++|.+.+++.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence 77777777777778887777777788777766666677778888888999999998655444 88889989998888765
Q ss_pred chhhhhhHHHHHHHHHH
Q 014646 363 NWRKTTLALTSIFFLAA 379 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (421)
|+..+...+...++..
T Consensus 156 -wr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 156 -WRYTFLLIAVFNIAVL 171 (382)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8888887766544443
No 157
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=1.4e-10 Score=105.71 Aligned_cols=148 Identities=13% Similarity=0.055 Sum_probs=111.5
Q ss_pred HHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHH
Q 014646 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (421)
...|.+. +.++.++.+. .......++..++.+..|++.||+||| +.+..+..+..+..+.....++.+.+.+.
T Consensus 30 ~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (390)
T PRK03545 30 GLLSDIA-QSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR-----KLLIGLFVLFIASHVLSALAWNFTVLLIS 103 (390)
T ss_pred cchHHHH-hHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3456554 4577776554 444666677788889999999999999 88877777777776666667777777777
Q ss_pred HHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
-.+.+.+.+...+....++.+..|+++|++++|+.+..... |..++|++.+.+.+..| |+..++..+...++...
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTAL-AMVLGLPLGRVIGQYLG-WRTTFLAIGGGALITLL 178 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHH-HHHHHhhHHHHHHHHhc-HHHHHHHHHHHHHHHHH
Confidence 66677766666677788889999999999999999655555 88999999998888765 88888877766544443
No 158
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.29 E-value=2.3e-10 Score=104.17 Aligned_cols=145 Identities=14% Similarity=0.054 Sum_probs=112.1
Q ss_pred HHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHH
Q 014646 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (421)
...+|.+.+ .++.++.+. ...+...++..++.++.|++.||+||| +.+.....+..+..+.....++.+.+++
T Consensus 40 ~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
T PRK10213 40 VSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLLLI 113 (394)
T ss_pred HhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 334666554 467776554 444667788889999999999999999 7777777777766666666677777777
Q ss_pred HHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHH
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 376 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 376 (421)
.-.+.+++.+...+....++.+.+|+++|+++.++.....+. |..++|.+.+.+.+..+ |+..|++.+...+
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~ 185 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI-ALVIAAPLGSFLGELIG-WRNVFNAAAVMGV 185 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Confidence 777888888877888888899999999999999999666555 88999999999998876 8777777655443
No 159
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.29 E-value=2.4e-10 Score=107.24 Aligned_cols=167 Identities=15% Similarity=0.120 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh-HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+....+..+....-...+..-+|.+..+ ++.+..+ ......+.++...+.+..|+++||+||| +.+..+..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHH
Confidence 3444455555555566677778888765 5555433 3455667778888889999999999999 8888777777
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhccc-CcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc
Q 014646 285 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 363 (421)
.+..+.....++.+.+++.-.+.+++.+...+.....+.+.+ |+++|++++|+....... |..+||.+.+++.++.+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-
Confidence 777777777778887777777778777776666666666665 568999999999655555 99999999999999866
Q ss_pred hhhhhhHHHHHHHHHHH
Q 014646 364 WRKTTLALTSIFFLAAG 380 (421)
Q Consensus 364 ~~~~~~~~~~~~~~~~~ 380 (421)
|++.|++...+.++...
T Consensus 160 wr~~f~i~~~~~~~~~~ 176 (495)
T PRK14995 160 WGSVFLINVPIVLVVMG 176 (495)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 88888776655444433
No 160
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.28 E-value=1.5e-10 Score=108.83 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHH
Q 014646 209 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 287 (421)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (421)
..+..+.............|.+.++ ++.+.... .......++..++.++.|++.||+||| +.+..+..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence 3344444455555666677777665 56554333 555777888999999999999999998 7777777777777
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhh
Q 014646 288 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 367 (421)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 367 (421)
.+.....++.+..++..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|.+.+++.++.+ |++.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence 666666777777777778888888877888889999999999999999999655555 88999999999998765 7777
Q ss_pred hhHHHHHHHHHHH
Q 014646 368 TLALTSIFFLAAG 380 (421)
Q Consensus 368 ~~~~~~~~~~~~~ 380 (421)
+++.....++...
T Consensus 159 f~~~~~~~~~~~~ 171 (485)
T TIGR00711 159 FLINVPIGIIVVV 171 (485)
T ss_pred hhhhhHHHHHHHH
Confidence 7776655444443
No 161
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.27 E-value=2.5e-10 Score=105.51 Aligned_cols=159 Identities=12% Similarity=0.072 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+....+.++.............|. +++..+.++.+. .......++..++.++.|+++||+||| +.+..+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHH
Confidence 333334444444444444444554 445567765444 445677788899999999999999999 7877777777
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch
Q 014646 285 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 364 (421)
.+..+.....++.+.+.+.-.+.+++.+...+....++.+..|+++|+++.++.+..... |.++++.+.+.+.+..+ |
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~~~l~~~l~~~~~-w 171 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI-GNIIAAYFMPSFAEAYG-W 171 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH-HHHHHHHHHHHHcccCC-H
Confidence 776666666677777777777888887777888888899999999999999998655554 88888888888877655 7
Q ss_pred hhhhhHHH
Q 014646 365 RKTTLALT 372 (421)
Q Consensus 365 ~~~~~~~~ 372 (421)
+..+++..
T Consensus 172 ~~~f~i~~ 179 (426)
T PRK12307 172 RAAFFVGL 179 (426)
T ss_pred HHHHHHHH
Confidence 77776543
No 162
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.27 E-value=9.9e-10 Score=96.73 Aligned_cols=309 Identities=14% Similarity=0.035 Sum_probs=167.4
Q ss_pred chhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHH
Q 014646 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
+.-+.+.++.+|+..+.=+....++..++.++.+++++.+.=+++-++.+++.|........+.. .+++ ...+-+
T Consensus 74 ~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~w 148 (402)
T PF02487_consen 74 LVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSAW 148 (402)
T ss_pred HHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----cccccc
Confidence 34456777888887666567777788899999999999998888999999988877776666644 5554 357888
Q ss_pred HhHHHHHhHHHHHHHHHhhcccc--hhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCc
Q 014646 86 YMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 163 (421)
Q Consensus 86 ~~~~~~G~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (421)
+.+.+.+.++|+..-..+.+ .+ -|..+++...+.++..+..++.+|..+......+..... + ..
T Consensus 149 ssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~-------~----~~-- 214 (402)
T PF02487_consen 149 SSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED-------E----AE-- 214 (402)
T ss_pred cCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC-------c----cc--
Confidence 88999888988887666655 44 477888887776666666666665422111100000000 0 00
Q ss_pred cccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch-hhH
Q 014646 164 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADM 242 (421)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 242 (421)
++...++.++++.+...+ ...++.++..+.++. ....+.+.+++-+....++...+ .......++ ...
T Consensus 215 --~~~~~~~~~~~~~~~~~~----~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~~tl---~fp~~~~~~r~~Y 283 (402)
T PF02487_consen 215 --DDLLESETSESKPDSSSK----LSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVAPTL---LFPNSFFSPRDQY 283 (402)
T ss_pred --ccccccccccccccccch----hhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchHHHh---cCCccCCCHHHHH
Confidence 000000000000000000 111111122222221 23333444444444444433221 111111111 112
Q ss_pred -HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH---HHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 243 -MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 243 -~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.+...+.++-.+++-....+ |+ | +. +.+...-.+-.+.++ ...+.++.|...+.++.-|...|..+...
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--ri--r--~l-wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RI--R--RL-WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--eh--h--hH-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34455555555544332211 11 1 11 222111111111111 22234567777777778888888888888
Q ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccCCchh
Q 014646 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
...+.++.++++|..++|... ....+|-.++..
T Consensus 357 F~~I~~~~~~~~REFslg~vs-vsds~GI~lAgl 389 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVS-VSDSLGILLAGL 389 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHH-HHhhHHHHHHHH
Confidence 888999999999999999994 445546555553
No 163
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.26 E-value=2.9e-10 Score=104.35 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHH
Q 014646 212 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 290 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
..++............|.+.++ ++.++.+. .......++..++.++.|++.||+||| +.+.....+..+..+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~ 96 (406)
T PRK11551 23 VALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-----RILIVSVALFGLFSLA 96 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHHHHHHHHHH
Confidence 3344444455555666766555 66675544 445677788899999999999999999 7776666655555555
Q ss_pred HHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhH
Q 014646 291 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 370 (421)
....++.+...+..++.+++.+...+....++.|.+|+++|++++++.+..... |..+++.+.+.+.+..+ |+..+++
T Consensus 97 ~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~ 174 (406)
T PRK11551 97 TAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF-GGALASVIGVLAAGDAA-WRHIFYV 174 (406)
T ss_pred HHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccccC-HHHHHHH
Confidence 555667777777777778877777777888899999999999999999766555 88888877777766544 6666766
Q ss_pred HHHHHHHH
Q 014646 371 LTSIFFLA 378 (421)
Q Consensus 371 ~~~~~~~~ 378 (421)
.+.+.++.
T Consensus 175 ~~~~~~~~ 182 (406)
T PRK11551 175 GGVGPLLL 182 (406)
T ss_pred HHHHHHHH
Confidence 55443333
No 164
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.25 E-value=3.1e-11 Score=110.00 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=103.2
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHH
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 84 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 84 (421)
.++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++.+++.+...+....+..|..|+ +|++++++
T Consensus 266 i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~ 344 (393)
T PRK15011 266 IPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTL 344 (393)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHH
Confidence 45678999999999999988887766666555555677888888899999888877777777788898886 49999999
Q ss_pred HHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 85 FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 85 ~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++...++|..++|.+++.+.+++||+..|++.+++.++..+..++.
T Consensus 345 ~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 345 YTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998999999998887776655555443
No 165
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.25 E-value=6.6e-09 Score=93.31 Aligned_cols=318 Identities=14% Similarity=0.124 Sum_probs=174.1
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcc------c--c-------hhHHHHHHHHHhhhhhh-hhcccccc
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------S--F-------DFWSIAICRMLVGVGEA-SFISLAAP 67 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~--~-------~~~~l~~~r~l~G~~~~-~~~~~~~~ 67 (421)
.++.++..|.+.||..|.+++..+.+..-++..+++. . + ....+++.-.+.|.-.- .......+
T Consensus 51 ~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~ia 130 (432)
T PF06963_consen 51 AILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIA 130 (432)
T ss_pred HHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 4567788899999999999987776554333322221 1 1 12222222223332221 22223344
Q ss_pred cccccC------CCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccc---c
Q 014646 68 FIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG---F 138 (421)
Q Consensus 68 ~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~---~ 138 (421)
.-.||. +++.+.+.++...-.-.+..+++|++.|.+.+..+.+....+.++..++..++-+++.....+. .
T Consensus 131 vERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L 210 (432)
T PF06963_consen 131 VERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPAL 210 (432)
T ss_pred eccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHh
Confidence 455664 3445667777777777788999999999999988998888888877777666655554211111 1
Q ss_pred CCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHH
Q 014646 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 218 (421)
..+++.+.... +.+ +. +..++..+....+...+..+....+++..+++|.+...... .+.++
T Consensus 211 ~~~~~~~~~~~----------~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~al-alLY~ 272 (432)
T PF06963_consen 211 AVKKRSSESES----------SSD----EE---SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFAL-ALLYF 272 (432)
T ss_pred cCCCCCccccc----------ccc----cc---ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHH-HHHHH
Confidence 01111100000 000 00 00000000111111112333444567777788876664443 33334
Q ss_pred HHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH---HHHHHHHHHHhh
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF---LGAISCLTAFCL 294 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 294 (421)
..-++...+..|+.+. |.++... .+-....+.++.+.++..++.+|+|.. +.-..+.. .+...+....+.
T Consensus 273 TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlv-----r~G~~~l~~q~~~L~~~v~~~~~ 346 (432)
T PF06963_consen 273 TVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLV-----RAGLWSLWWQWVCLALCVVSFWA 346 (432)
T ss_pred HHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----hhHHHHHHHHHHHHHHHHHHHhc
Confidence 3444556667788776 6665444 334667788899999999999999976 33222222 122222222222
Q ss_pred c-------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHh
Q 014646 295 S-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 345 (421)
Q Consensus 295 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (421)
+ +...++....+.-++.-+.-....-+++|.+|+++||..+|+.+...+.+
T Consensus 347 ~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 347 PGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 1 12223333333334444444556778889999999999999997777663
No 166
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.25 E-value=7.7e-10 Score=102.80 Aligned_cols=148 Identities=15% Similarity=0.095 Sum_probs=97.8
Q ss_pred HHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh----chh
Q 014646 223 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL 297 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 297 (421)
+....|. +.+. +.+..+. ...+...++..++.++.|+++||+|+| +.+..+..+..+..+..... .+.
T Consensus 48 ~~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----~~l~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-----hhHHHHHHHHHHHHHHHHhhhcccccH
Confidence 4455665 4454 7765554 444677788899999999999999999 77666665555554444332 244
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhcc-CCchhHHHHhhhhhhchhhhhhHHHHHHH
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD-VPSSPLVGVLQDHVNNWRKTTLALTSIFF 376 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 376 (421)
+..++...+.+++.+...++....+.+.+|+++|++++|+.+..... |. ..+|.+...+.. ..+|+..+++.+...+
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV-GGGLPPLLFLLGMAW-FNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 45555556677777777777777888888999999999998766666 54 445543322322 2357777777665544
Q ss_pred HHH
Q 014646 377 LAA 379 (421)
Q Consensus 377 ~~~ 379 (421)
+..
T Consensus 199 ~~~ 201 (452)
T PRK11273 199 LVA 201 (452)
T ss_pred HHH
Confidence 433
No 167
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=9.4e-10 Score=102.67 Aligned_cols=153 Identities=14% Similarity=0.101 Sum_probs=98.8
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHH
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 300 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
....+.|.+ .+.++.+..+. .......++..++.++.|+++||+|+| +.+....+...+..++....++.+.+
T Consensus 54 ~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r-----~~~~~~~~~~~~~~~~~~~~~s~~~l 127 (476)
T PLN00028 54 AAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR-----YGSAFLLMLTAPAVFCMSLVSSATGF 127 (476)
T ss_pred HHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 333444444 55577775554 334566677888999999999999998 66666665555555555555566655
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh--------hhchhhhhhHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--------VNNWRKTTLALT 372 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--------~~~~~~~~~~~~ 372 (421)
++..++.+++.+.. .+...++.+.+|+++|++++|+.+...+. |..+++.+.+.+.+. ..+|+..|++.+
T Consensus 128 ~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~-g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 128 IAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNL-GGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 55555566555543 34455678889999999999998655555 666666555544321 124888888777
Q ss_pred HHHHHHHHHh
Q 014646 373 SIFFLAAGIW 382 (421)
Q Consensus 373 ~~~~~~~~~~ 382 (421)
++.++..+..
T Consensus 206 ~l~l~~~l~~ 215 (476)
T PLN00028 206 LLHIIMGILV 215 (476)
T ss_pred HHHHHHHHHH
Confidence 6655444433
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.25 E-value=7.2e-10 Score=103.05 Aligned_cols=177 Identities=12% Similarity=0.036 Sum_probs=128.6
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHH
Q 014646 199 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 278 (421)
Q Consensus 199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 278 (421)
..+|+|.|..+.++....+.+......-.+-+..+..+.+...........+..++.++++|.++||+.|| ++++
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr-----rili 79 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR-----RILI 79 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch-----HHHH
Confidence 34688999998888888888877777666666666544332223444556677788899999999999999 7766
Q ss_pred HHHHHHHHHHHH-----HHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhH
Q 014646 279 AATFLGAISCLT-----AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 279 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
.+-++..+.... .....+.+.++++.++.+.+.....+...+.+.+.+|+++...++++.+...+. +.++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~ni-ar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNI-ARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHH-HHhccchH
Confidence 555444332221 112235667777778888888888899999999999999999999999777777 88999999
Q ss_pred HHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 354 VGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 354 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
+|.+....| ....|.+-+...+.....+
T Consensus 159 gG~Lva~~G-~~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 159 GGILVAFFG-AAAAFLINALSFLISILAL 186 (524)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999877 4466666665555544433
No 169
>PRK11043 putative transporter; Provisional
Probab=99.25 E-value=4.6e-10 Score=102.78 Aligned_cols=157 Identities=16% Similarity=0.074 Sum_probs=108.4
Q ss_pred HHHHHHHHHhhhH--HHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh
Q 014646 218 FVIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 294 (421)
Q Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (421)
..+.....+.|.+ +.+..+.++... ...++..++..++.++.|+++||++|| +.+..+..+..+..+.....
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHh
Confidence 3333444455544 445567775554 445677888899999999999999999 77766666666555555555
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
++.+...+...+.+++.+...+.......+.+++++++...+..+..... +..++|.+.+++.+..+ |+..++..+..
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~ 169 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAI 169 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHH
Confidence 66666665556666655555555567788889888888888888655554 77889999999988765 77777766655
Q ss_pred HHHHHHH
Q 014646 375 FFLAAGI 381 (421)
Q Consensus 375 ~~~~~~~ 381 (421)
.++..+.
T Consensus 170 ~~~~~~~ 176 (401)
T PRK11043 170 TLLLILP 176 (401)
T ss_pred HHHHHHH
Confidence 5444433
No 170
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=6.2e-09 Score=93.35 Aligned_cols=306 Identities=11% Similarity=0.040 Sum_probs=172.6
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+.+.+++.+.+.|+.|.|+.+.++...+.......-+- |-+-+++...+.|+|.+..+..--.++.|+.+++.+.+..+
T Consensus 63 ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nis 141 (461)
T KOG3098|consen 63 FTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNIS 141 (461)
T ss_pred HHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHH
Confidence 46788999999999999999999999998877766554 46667889999999999999999999999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcc--------cchh-HHH---HHhHHHHHHHHHHH-Hhcc--cccccccCCcccccchh
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSH--------LNWR-YAF---WGEAILMLPFAVLA-FVIK--PLQLKGFAPAESGKAQV 148 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~--------~gwr-~~f---~~~~~~~~~~~~~~-~~~~--p~~~~~~~~~~~~~~~~ 148 (421)
+..+....+.++|..+-..+..+ .+-+ ..+ +..-.+-++..++. ...+ ...... +.+.....
T Consensus 142 i~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~--p~~~~~~~- 218 (461)
T KOG3098|consen 142 IFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL--PSKDVVNC- 218 (461)
T ss_pred HHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec--Cccchhhh-
Confidence 99988888888887655433211 1111 111 00000000000000 0000 000000 00000000
Q ss_pred hhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 014646 149 VASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 228 (421)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (421)
.+.. + ....+..+..-+++++|+...+....+..+..........|
T Consensus 219 --------------------~~~~------~--------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iyp 264 (461)
T KOG3098|consen 219 --------------------KSSS------E--------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYP 264 (461)
T ss_pred --------------------hhhc------c--------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccc
Confidence 0000 0 01112223344556677766666555444444444444444
Q ss_pred hHHHHh--hccch--hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHH-HHhhc--------
Q 014646 229 KAGYNI--YHMSN--ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AFCLS-------- 295 (421)
Q Consensus 229 ~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------- 295 (421)
..+.-. .+.+. .........+++.+++.+..+.+.+|..+...+ ..+.....+....+++ ....+
T Consensus 265 t~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~~~li~l~~p~dap~~~t 342 (461)
T KOG3098|consen 265 TCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIGFLLIHLSFPNDAPLRPT 342 (461)
T ss_pred hhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHHHHHHhccccccCCCCCC
Confidence 433222 22222 112233445566666777777777665443221 3333333333333222 22111
Q ss_pred ---------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCch
Q 014646 296 ---------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.....+...+.|+.........++++.... +++|.++.++.- +...+++.++-
T Consensus 343 ~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k-fyq~~~s~v~~ 405 (461)
T KOG3098|consen 343 DSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFK-FYQSVASCVAF 405 (461)
T ss_pred cccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHH-HHHHHHHHHHh
Confidence 2335566667788888888888898988888 777888888874 44443554433
No 171
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.23 E-value=8.4e-10 Score=100.18 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=100.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
+|.++...+.........+......+.+-++.++.+..+. ...+++.+.+.+..+..|++.||+|.| +....+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence 4566665555554444454555555555554688887666 445778888889999999999999998 7776666
Q ss_pred HHHHHHHHHHHhh-----chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHH
Q 014646 282 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 282 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
++..+..+..... ++.+.+++.-++.+++ +..+++....+.+.+|+++||+++|+.....+. |..+++++.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 6666555555443 5666666666677765 557777888888999999999999999533333 65555554444
No 172
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.22 E-value=6.2e-10 Score=105.00 Aligned_cols=158 Identities=12% Similarity=0.131 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHH
Q 014646 205 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 283 (421)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 283 (421)
.+....+..+.............|.+. +.++.++... .......++..++.++.|++.||+||| +.+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR-----LAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHH
Confidence 334444444444555555555566554 5577775444 445667788889999999999999998 777777666
Q ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc
Q 014646 284 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 363 (421)
..+..+.....++.+.+.+...+.+++.+...+....++.+.+|+++|++++++.+...+. |..++|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~- 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSI-GAVVAAQVYSLVVPVWG- 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCC-
Confidence 6666666666667777777777788877777788888899999999999999999665555 88999999999888755
Q ss_pred hhhhhhH
Q 014646 364 WRKTTLA 370 (421)
Q Consensus 364 ~~~~~~~ 370 (421)
|+..+.+
T Consensus 173 w~~~f~~ 179 (496)
T PRK03893 173 WRALFFI 179 (496)
T ss_pred HHHHHHH
Confidence 7666654
No 173
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.21 E-value=5.2e-10 Score=100.43 Aligned_cols=162 Identities=20% Similarity=0.214 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHH
Q 014646 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
....+.............|.+.++. +.++... .......++..++.++.|++.||+||| +.+..+.....+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r-----~~~~~~~~~~~~~~ 78 (352)
T cd06174 5 FLGFFLSGLDRGLLSPALPLLAEDL-GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR-----RVLLLGLLLFALGS 78 (352)
T ss_pred HHHHHHHHHhhhhhHhhHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc-----hhhHHHHHHHHHHH
Confidence 3445556666667777788887764 4554333 455777788899999999999999999 77777777776666
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhh
Q 014646 289 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 368 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 368 (421)
......++.+...+...+.+.+.+...+....+..|..|+++|++++++.+..... |..++|.+.+.+.+..+ ++..+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~ 156 (352)
T cd06174 79 LLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGL-GALLGPLLGGLLAESLG-WRWLF 156 (352)
T ss_pred HHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHH-HHHHHHHHHHHHHHHhh-HHHHH
Confidence 66666677777777777788888888888899999999999999999999766655 88999999999988755 66666
Q ss_pred hHHHHHHHHHH
Q 014646 369 LALTSIFFLAA 379 (421)
Q Consensus 369 ~~~~~~~~~~~ 379 (421)
.+.+...++..
T Consensus 157 ~~~~~~~~~~~ 167 (352)
T cd06174 157 LILAILGLLLA 167 (352)
T ss_pred HHHHHHHHHHH
Confidence 66555544433
No 174
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.20 E-value=8.3e-11 Score=102.91 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=124.1
Q ss_pred HHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Q 014646 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 310 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (421)
++.++.++... .+.....+...++++++|++.||++|+ .++..+..+-.+..+...+....|.+.+.=.+.|.+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34455554433 556777888999999999999999999 666666665555555555557788888888889999
Q ss_pred HhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhheeeec
Q 014646 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 390 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (421)
.+...+..+++++|.+|.++|++++++.+..... |..+|-+....+.+..+.|++++...+++.++..++.++....|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999999988887 888888888888888888999999999888887777766655555
Q ss_pred c
Q 014646 391 I 391 (421)
Q Consensus 391 ~ 391 (421)
|
T Consensus 214 r 214 (493)
T KOG1330|consen 214 R 214 (493)
T ss_pred c
Confidence 4
No 175
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.19 E-value=1e-09 Score=99.63 Aligned_cols=164 Identities=15% Similarity=0.018 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHH-HHHHHHHHHHH
Q 014646 211 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISC 288 (421)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~ 288 (421)
+.+++...........+|.|+++..+.+.... ...+...+...+..++.|+++||+||| +.+ ...........
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR-----KGLILFCCLLAALAC 78 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-----hHHHHHHHHHHHHHH
Confidence 34566666777777888888888888876554 334566677888889999999999987 543 33444444444
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHH--HHHHHHHHHHhccCCchhHHHHhhhhhhchhh
Q 014646 289 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS--MAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 366 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 366 (421)
+.....++.+..++...+.+.+.+...+....+..+..|++.|+.+ .+..+...+. |..++|.+.+.+.+..+ |+.
T Consensus 79 ~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ig~~~~~~l~~~~~-~~~ 156 (375)
T TIGR00899 79 LLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISL-AWVIGPPLAFWLALGFG-FTV 156 (375)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhH-HHHHhhhHHHHHHHhcc-cHH
Confidence 4444455555444444444444444555555666666666656544 4665444444 88999999999988765 878
Q ss_pred hhhHHHHHHHHHHHH
Q 014646 367 TTLALTSIFFLAAGI 381 (421)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (421)
.+++.+...++..+.
T Consensus 157 ~f~~~~~~~~~~~~~ 171 (375)
T TIGR00899 157 MFLTAALAFVLCGVL 171 (375)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888776655444433
No 176
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.19 E-value=1e-09 Score=100.34 Aligned_cols=153 Identities=10% Similarity=-0.024 Sum_probs=103.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
++.+....+..++..........+.|.+.++ .+.++.+. .......++..++.++.|++.||+||| +.+..+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k-----~~l~~~~ 85 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL-----KTMMIGL 85 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHH
Confidence 3455555666666666666666778888865 56665444 445677788899999999999999998 7666655
Q ss_pred HHHHHHHHHHH---h-hchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhcc-CCchhHHHH
Q 014646 282 FLGAISCLTAF---C-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD-VPSSPLVGV 356 (421)
Q Consensus 282 ~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~-~~~~~~~g~ 356 (421)
.+..+..+... . ..+.+...+...+.+.+.+...+.......+.+|+++|++++|+.+...+. |. ..+|.+.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~g~~~~~~ 164 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSI-GIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 55544433221 1 234444444555555555544555566677888999999999999766655 64 568888888
Q ss_pred hhhhhh
Q 014646 357 LQDHVN 362 (421)
Q Consensus 357 l~~~~~ 362 (421)
+.+..|
T Consensus 165 l~~~~g 170 (402)
T TIGR00897 165 AIPAFG 170 (402)
T ss_pred cccccc
Confidence 888765
No 177
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.19 E-value=1.3e-09 Score=99.54 Aligned_cols=153 Identities=11% Similarity=0.033 Sum_probs=104.7
Q ss_pred HHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch
Q 014646 218 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 296 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
.........+|.+.+ ..+.++... .......++..++.++.|+++||+||| +.+........+..+.....++
T Consensus 22 ~~~~~~~p~~~~i~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
T PRK11652 22 MAQTIYVPAIADMAR-DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHS 95 (394)
T ss_pred HHHHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence 333334444555554 466665444 445677788899999999999999998 7666666665555555555566
Q ss_pred hHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHH
Q 014646 297 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 376 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 376 (421)
.+...+...+.+++.+...+.......+.+++++++.+.+..+..... +..++|.+.+.+.+..+ |+..+.+.+...+
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~ 173 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGA 173 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHH
Confidence 666666666666665555555566677778888999999998655544 77889989998888765 7777777655444
Q ss_pred HH
Q 014646 377 LA 378 (421)
Q Consensus 377 ~~ 378 (421)
+.
T Consensus 174 ~~ 175 (394)
T PRK11652 174 GV 175 (394)
T ss_pred HH
Confidence 33
No 178
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.18 E-value=6e-10 Score=101.09 Aligned_cols=154 Identities=13% Similarity=0.144 Sum_probs=105.9
Q ss_pred HHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhH
Q 014646 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 298 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (421)
.+....+.|.+. +.++.+..+. ...+...++..++.+..|+++||+||| +.+..+..+..+..+.....++.+
T Consensus 19 ~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-----~~~~~~~~~~~~~~~~~~~~~~~~ 92 (377)
T TIGR00890 19 VYTWTLLAPPLG-RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-----AVAMLGGILYGLGFTFYAIADSLA 92 (377)
T ss_pred HhhhhhHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-----chhHHhHHHHHHHHHHHHHHHHHH
Confidence 344445556544 4567776554 445777889999999999999999999 777666666666666666667777
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHH
Q 014646 299 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 378 (421)
.+.+...+.+++.+..++.......+.+| ++|+++.++.+..... |..+++++.+.+.+..+ |+..+...++..++.
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGL-GSFILSPLITSVINLEG-VPAAFIYMGIIFLLV 169 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcch-hHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHH
Confidence 77766667777776666556666666664 6799999998655444 76666666666666544 777777776655554
Q ss_pred HHHh
Q 014646 379 AGIW 382 (421)
Q Consensus 379 ~~~~ 382 (421)
....
T Consensus 170 ~~~~ 173 (377)
T TIGR00890 170 IVLG 173 (377)
T ss_pred HHHH
Confidence 4433
No 179
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.18 E-value=6.6e-10 Score=100.90 Aligned_cols=150 Identities=16% Similarity=0.150 Sum_probs=112.6
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHH
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 300 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
.....+|.+.++ ++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+........++.+..
T Consensus 9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344556666665 66665444 445677788899999999999999998 77777776666666666666677777
Q ss_pred HHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
.+...+.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..++..+...++..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHH
Confidence 77777777777777777888899999999999999999766555 88899999999988765 7677766655544443
No 180
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.18 E-value=1e-09 Score=98.51 Aligned_cols=154 Identities=10% Similarity=-0.024 Sum_probs=104.9
Q ss_pred HHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchh
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
....+...+|.+.++ ++.+..+. ...+...++..++.+..|++.||+||| +.+.................++.
T Consensus 6 ~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccH
Confidence 334455556666554 67776554 445667788899999999999999987 55544443333332222222456
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHH
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 377 (421)
...++.-.+.+.+.+. ..+......+.+|+++|++++++.+..... |..+++.+.+++.+..| |+..|+..+.+.++
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~ 156 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHH
Confidence 6666666666766654 344555668889999999999999655555 99999989898888765 88888876666555
Q ss_pred HHHH
Q 014646 378 AAGI 381 (421)
Q Consensus 378 ~~~~ 381 (421)
..++
T Consensus 157 ~~~~ 160 (368)
T TIGR00903 157 GIIL 160 (368)
T ss_pred HHHH
Confidence 4443
No 181
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.18 E-value=1.2e-09 Score=99.20 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=115.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
++.++......+...........++|.+.++ .+.+..+. ...+...++..++.++.|+++||+||| +.+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k-----~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN-----RSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----HHHHHHH
Confidence 3446666777777777788888899999886 46665444 445777888899999999999999998 7776666
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 282 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
.+...........++.+.+.+...+.+++.+...+.....+.+..++++|+++++..+...+. |..++|.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYL-GTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccc
Confidence 666666655555677777777777777777766666666777888889999999998666555 888999888888765
No 182
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.17 E-value=1.1e-10 Score=109.50 Aligned_cols=132 Identities=8% Similarity=-0.073 Sum_probs=102.9
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcc-----cc------hhHHHHHHHHHhhhhhhhhcccccccccc
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SF------DFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
+..++.++.|+++||+|||+.+.++.++.+++.++.++ .+ +...+....++.+.......+....++.|
T Consensus 331 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (481)
T TIGR00879 331 VNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSE 410 (481)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhc
Confidence 45678899999999999999999998888777766652 11 23333333333333333345666778899
Q ss_pred cCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhccccc
Q 014646 72 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 72 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
.+|+++|++++++.....++|.+++|.+.+.+.++.+|++.|++.++++++..++.+++.||.
T Consensus 411 ~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 411 IFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 999999999999999999999999999999999888999999999988888777777666653
No 183
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=1.1e-09 Score=101.58 Aligned_cols=151 Identities=12% Similarity=0.131 Sum_probs=101.1
Q ss_pred HHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHH
Q 014646 223 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 301 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
+..+.|.+.+ .++.+.... .......+...++.++.|+++||++|| +.+..+.++..+..+.....++.+...
T Consensus 38 ~~~~~~~i~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~ 111 (455)
T TIGR00892 38 VTVFFKELQQ-IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR-----PVVIAGGLLASLGMILASFSSNVIELY 111 (455)
T ss_pred hhhhHHHHHH-HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch-----HHHHhhHHHHHHHHHHHHHhhhHHHHH
Confidence 4455666554 456654333 334555566678888999999999998 666666655555555554555555443
Q ss_pred HHH-HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 302 ALF-TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
... .+.+++.+...++....+.+.+ +++|+++.|+.+..... |..++|.+.+.+.+..| |+..|+..+.+.++..+
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~r~~a~g~~~~~~~~-g~~~~~~l~~~l~~~~g-wr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYF-YRRRPLANGLAMAGSPV-FLSTLAPLNQYLFESFG-WRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHH-HhhHHHHHHHHHhcccH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHH
Confidence 332 3445555544455566666766 57899999999766666 77888989999998775 88888888776655544
Q ss_pred Hh
Q 014646 381 IW 382 (421)
Q Consensus 381 ~~ 382 (421)
..
T Consensus 189 ~~ 190 (455)
T TIGR00892 189 CG 190 (455)
T ss_pred HH
Confidence 33
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=2.2e-09 Score=98.45 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=105.4
Q ss_pred HHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHH
Q 014646 223 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 301 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
+...+|.+. +.++.++... .......++..++.++.|+++||+||| +.+..+.....+..+.....++.+..+
T Consensus 32 ~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~ 105 (406)
T PRK15402 32 IQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR-----PVMLAGVAFFILTCLAILLAQSIEQFT 105 (406)
T ss_pred HhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 333445444 4567765444 334667788889999999999999999 777666666666655555566666666
Q ss_pred HHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
....+.+.+.+...+.....+.|.+|+++|.++.++.+..... +..++|.+.+.+.+..+ |+..+++.++..++...
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~~-w~~~~~~~~~~~~~~~~ 182 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALL-APLLGPLVGAALIHVLP-WRGMFVLFAALAALSFF 182 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHH
Confidence 6666666666655566677888889889999999988655444 77889989888888655 77777776666554443
No 185
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.16 E-value=2.7e-10 Score=97.01 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=92.9
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhh
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
.+++.+.+...+.++..|.++||+||| ..+..+.+...+..++.....+...++..=++.| ...+..+...+++
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~G-i~kgnl~v~rAii 145 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNFAAFVLARFLGG-IFKGNLSVIRAII 145 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCchHHHHHHH
Confidence 456778899999999999999999999 8887777777777777776667633333233333 3445667789999
Q ss_pred hcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh---hhhchhhhh
Q 014646 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTT 368 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~~~~~~~~ 368 (421)
.|.+++++|+.+++..+...+. |.++||.++|++.. ..|.|...+
T Consensus 146 sdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred HhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHH
Confidence 9999999999999999777666 99999999999988 556664444
No 186
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=2.4e-09 Score=98.10 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=103.5
Q ss_pred HHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Q 014646 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 310 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (421)
.+.++.+.... ...++..++..++.++.|+++||+||| +.+..+..+..+..+.....++.+.+++.-++.+++
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566665444 444667788899999999999999999 777766666666666666667777776666666666
Q ss_pred HhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
.+...+.......|.+|++++++++++.+..... +..++|.+.+.+.+..+ |+..|+..++..++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHH
Confidence 5544444566777888888999999998766665 88889988888887655 88888877666554443
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.14 E-value=2.3e-10 Score=103.94 Aligned_cols=122 Identities=15% Similarity=0.048 Sum_probs=108.2
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+++.++.+++.||+|+|+.+.++.++..+..++.+++++.+.+++.++++|++.+...+....++.+. |+++|++..
T Consensus 252 ~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q 330 (382)
T TIGR00902 252 AEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQ 330 (382)
T ss_pred HHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHH
Confidence 3456778899999999999999999999999999999999999999999999999999999999999998 988999999
Q ss_pred HHHH-hHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHH
Q 014646 83 SMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 126 (421)
Q Consensus 83 ~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 126 (421)
++++ ...++|.++++.++|.+.+++|+ ..|++.++++++..++
T Consensus 331 ~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 331 ALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9986 57789999999999999999986 6677777776654433
No 188
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.12 E-value=3.3e-09 Score=96.68 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=112.6
Q ss_pred HHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHH
Q 014646 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 299 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (421)
......+|... +.++.+..+. ...+...++..++.+..|++.||+||| +.+..+..+..+..+.....++.+.
T Consensus 26 ~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r-----~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER-----RSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHCcchHH
Confidence 34445566655 4567775554 445777788899999999999999999 8898888888888888888888888
Q ss_pred HHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
+++.-.+.+++.+...+....++.+.+| ++|+.+++..+..... |..+++.+.+++.++..+|+..+.+.+..
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMG-GGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 8888888888888777777778888775 7899999998655555 77888888888888765576666554444
No 189
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.12 E-value=1.2e-09 Score=102.01 Aligned_cols=151 Identities=14% Similarity=0.052 Sum_probs=102.5
Q ss_pred HHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH-----hh
Q 014646 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CL 294 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 294 (421)
..+....|.+. +.++.+..+. ...+...++..++.++.|+++||+|+| +.+..+.++.++...... ..
T Consensus 46 ~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~ 119 (467)
T PRK09556 46 KNFKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK-----QFLPFLLILSAICMLGFGASLGSGS 119 (467)
T ss_pred cChhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc-----chHHHHHHHHHHHHHHHHHHHhccc
Confidence 33444466544 4567665554 445667788899999999999999999 665554444433332222 23
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh--hchhhhhhHHH
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALT 372 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~ 372 (421)
++.+..++.-++.+++.+...+....++.+.+|+++|++++|+.+...+. |.++++.+..++.+.. ++++..+.+.+
T Consensus 120 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l-G~~l~~~i~~~~~~~~~~~~~~~~f~~~g 198 (467)
T PRK09556 120 VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL-GGAGAGGVALWGANYFFDGHVIGMFIFPS 198 (467)
T ss_pred chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch-hhhHHHHHHHHHHHhhccCcchhHHHHHH
Confidence 56666777777788888888888889999999999999999999655555 8788887776665542 23555565555
Q ss_pred HHHHHH
Q 014646 373 SIFFLA 378 (421)
Q Consensus 373 ~~~~~~ 378 (421)
...++.
T Consensus 199 ~~~~~~ 204 (467)
T PRK09556 199 IIALII 204 (467)
T ss_pred HHHHHH
Confidence 444433
No 190
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.11 E-value=5.1e-09 Score=95.65 Aligned_cols=146 Identities=9% Similarity=0.032 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+..++..++...+.........|.+ ++.++.+..+. ...+...++..++++..+++.||+|+| +.+..+..+.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 3344444555555555555666765 56677776555 445777889999999999999999999 7777777666
Q ss_pred HHHHHHHHh---hchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhh
Q 014646 285 AISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 285 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
.+..+.... .++.+.+++..++.+.+.+...+....+..+..|++++++..++.+...+. |..++|.+.+.+.
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~ 154 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 665554322 245666677777788888888888888888888889999999999766666 8889998887774
No 191
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.11 E-value=2.4e-09 Score=97.84 Aligned_cols=169 Identities=12% Similarity=0.006 Sum_probs=105.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
||.+|......++.......+..++|.|+.+..+.++.+. .......+...++.++.|+++||+||| +.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-----~~~~~~~ 75 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-----KHLLWII 75 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence 4778888888888888888888999999998888886555 445778899999999999999999998 5554333
Q ss_pred HHHHHHHH---HHHhhc-----hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhH
Q 014646 282 FLGAISCL---TAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 282 ~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
........ .....+ ......+...+.+.+.+...+....+..+.. +.++...|......+ +|..++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~-~g~~~g~~~ 152 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGC-VGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcc-cHHHHHHHH
Confidence 22222111 111111 1111122223344444444555555544432 223345565544444 488889989
Q ss_pred HHHhhhhhhchhhhhhHHHHHHHHHHHH
Q 014646 354 VGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 354 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (421)
.|.+.+. +++..|+..+...++..++
T Consensus 153 ~g~l~~~--~~~~~f~~~~~~~~~~~~~ 178 (396)
T TIGR00882 153 AGILFSI--DPQIVFWLGSGFALILMLL 178 (396)
T ss_pred Hhhhhcc--CchHHHHHHHHHHHHHHHH
Confidence 8888764 4767777766655554433
No 192
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.11 E-value=2.7e-10 Score=106.95 Aligned_cols=131 Identities=9% Similarity=0.015 Sum_probs=98.4
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc--h-hH-HHHHHHHHhhhhhhh-hcccccccccccCCCCCc
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--D-FW-SIAICRMLVGVGEAS-FISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~-~~-~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r 78 (421)
.+++.++.|+++||+|||++++.+.++.+++.++.+... + .+ ....+-++.+.+.+. ..|....++.|.+|+++|
T Consensus 319 ~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 319 NLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 457789999999999999999999999888877765431 1 11 222334444444443 336678999999999999
Q ss_pred hhHHHHHHhHHHHHhHHHHHHHHH------hhcccchhHHHHHhHHHHHHHHHHHHhccccc
Q 014646 79 TAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
++++++.+....+|..+++.+.+. +.+.++|++.|++.+++.++..++.+++.||+
T Consensus 399 ~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 399 GKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccC
Confidence 999999999999999888665544 34578899999999888777777776666664
No 193
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.11 E-value=3.5e-09 Score=99.81 Aligned_cols=110 Identities=9% Similarity=0.048 Sum_probs=83.7
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch------hHHHHHHHHHHHHHHhcccc
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS------LYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 316 (421)
.+.....++.+++.++.|++.||+||| +.+....++..+..++.....+ .+.+++.-.+.+++.+...+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRK-----RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 455677788999999999999999999 7766665555554444333332 45566777788888888889
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhh
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
....+..|.+|++.|++++++.+..... |..+++.+...+.
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-g~~~g~~~~~~~~ 175 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGF-GILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999655555 7777776665543
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.10 E-value=1e-08 Score=91.73 Aligned_cols=128 Identities=13% Similarity=0.005 Sum_probs=104.3
Q ss_pred hhhHHHHhhccchhh-H-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHH
Q 014646 227 GPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 304 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (421)
...++.+.+|.+..+ . ........+..+..+.+|+++||+|.| +.+....+.-.+...+..+..+...+.+.-
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333566678888766 3 445677788899999999999999999 888877777777777777777788888888
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
++.|.+.+..+ ....++..-+|+++|+++.|+.+..... |.++++++.+++ ..+|
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll-~s~g 177 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLL-VTLG 177 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HhcC
Confidence 88999988888 8899999999999999999999776666 989999898884 4444
No 195
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.09 E-value=2.9e-07 Score=83.90 Aligned_cols=307 Identities=12% Similarity=0.041 Sum_probs=166.6
Q ss_pred hhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc----ch---------------------------hHHHHHHHHHhhh
Q 014646 8 SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----FD---------------------------FWSIAICRMLVGV 56 (421)
Q Consensus 8 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~---------------------------~~~l~~~r~l~G~ 56 (421)
.++.+++++|++|++++-+....+.....++++. ++ .|...+.-+...+
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 7889999999999999888777776666665544 11 2222222333334
Q ss_pred hhhhhcc-cccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc--------ccchh----HHHHHhHHHHHHH
Q 014646 57 GEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWR----YAFWGEAILMLPF 123 (421)
Q Consensus 57 ~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~gwr----~~f~~~~~~~~~~ 123 (421)
-.....+ .-..+.+|.++.+|-.|..++.+.+.++|.++++.+..++.+ ...|. ..+.+.++..++.
T Consensus 141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~ 220 (472)
T TIGR00769 141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI 220 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHH
Confidence 3444444 567889999999999999999999999999999999888762 11342 2334444333333
Q ss_pred HHHHHhcccccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhch
Q 014646 124 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 203 (421)
Q Consensus 124 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 203 (421)
..+...+ .+.... +++..+ . + + ..+++ +...+..++++.++++
T Consensus 221 ~~~~~~l-~~~~~~--~~~~~~-~-------------------~----~---~~~k~-------k~k~~~~es~k~i~~S 263 (472)
T TIGR00769 221 ILLYWWV-NRNVLT--DPRSYN-P-------------------A----L---KEKKV-------KPKMSTMESLKFLVSS 263 (472)
T ss_pred HHHHHHH-HhcccC--Cccccc-h-------------------h----h---ccccC-------CCCCCHHHHHHHHHhC
Confidence 3333322 111100 000000 0 0 0 00000 1122445788999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-H---HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M---FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 279 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 279 (421)
|.+..+.+...+++...+.+..-......+.+..+.+.. . +....++..++..++.+++.+|+|-+ .....
T Consensus 264 ~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~-----~~a~i 338 (472)
T TIGR00769 264 PYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL-----TAALI 338 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHH
Confidence 999988888777777766666544445555553222111 2 22333444455566668888888876 22222
Q ss_pred HHHHHHH---HHHHH-Hhhch-----------h-HHHHHHH----HHHHHHHhccccchhhhhhcccCcchhHHHHHHHH
Q 014646 280 ATFLGAI---SCLTA-FCLSS-----------L-YGFLALF----TVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 339 (421)
Q Consensus 280 ~~~~~~~---~~~~~-~~~~~-----------~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (421)
.-++..+ .+... .+.++ + ....... .+.-..-....-+.--.+---+++|.|.++=+...
T Consensus 339 ~Pii~lit~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD 418 (472)
T TIGR00769 339 TPLVMLLTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAID 418 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhh
Confidence 2111111 11111 11110 0 1011111 11122222333444334444467788888888888
Q ss_pred HHHHHhccCCchhHHHH
Q 014646 340 VSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 340 ~~~~~~g~~~~~~~~g~ 356 (421)
...+.+|-..|..+...
T Consensus 419 ~v~~r~Gks~gs~i~~~ 435 (472)
T TIGR00769 419 VVAARLGKSGGALIQQG 435 (472)
T ss_pred hhhhhhhhHHHHHHHHH
Confidence 77777676666654433
No 196
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.06 E-value=1.1e-08 Score=95.12 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=111.1
Q ss_pred HHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHH
Q 014646 225 YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (421)
.-++....+. |.++...++.....++..++.++.|+++|.+||| ...+...++..+..+.....++...++...
T Consensus 65 ~~l~~I~~di-G~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~i~g~~l~vvG~Iv~atA~~~~~~iag~ 138 (599)
T PF06609_consen 65 SILPYINADI-GGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFFIIGSLLGVVGSIVCATAQNMNTFIAGM 138 (599)
T ss_pred HHHHHHHHhc-CCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHHHHHHHHHHhHHHHhhcCCcHHHHHHHH
Confidence 3345445554 4455455666667788888899999999999999 888889989998888888888888888888
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhh
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
.+.+++.+... .....+.|..|.+.|..+.++.. .........+|.+...+..+ ++|++.+++..+...++.+..++
T Consensus 139 ~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~-~~~i~~~~~~~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 139 VLYGVGAGVQE-LAALAISELVPNKWRGLGLAIAS-IPFIITTWISPLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHH-HHHHhhhcccHHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHH
Confidence 88888765443 34556889999999998887774 44444555677666555544 56999998887766665554443
Q ss_pred h
Q 014646 385 G 385 (421)
Q Consensus 385 ~ 385 (421)
+
T Consensus 216 f 216 (599)
T PF06609_consen 216 F 216 (599)
T ss_pred H
Confidence 3
No 197
>TIGR00898 2A0119 cation transport protein.
Probab=99.06 E-value=5.9e-10 Score=105.33 Aligned_cols=128 Identities=12% Similarity=-0.077 Sum_probs=104.1
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchh--HHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+...+....+..|.+|++.|++++
T Consensus 369 i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 448 (505)
T TIGR00898 369 LPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGV 448 (505)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhH
Confidence 4577889999999999999999999998888887776654 45555666777777777888889999999999999999
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccc
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
++.+....+|.+++|.+.+ + ...++..++.+.++..++.+++.+ ++||+.
T Consensus 449 g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 449 GVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred hHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 9999999999999999988 4 345677888888877777666654 447643
No 198
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.05 E-value=4.1e-09 Score=88.62 Aligned_cols=311 Identities=10% Similarity=-0.004 Sum_probs=199.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+.+.-.+.=.+.|..--|++++.-.+.......+.-+.++.+.+=+.-+..|...+ ...+-++++-+-.+|+++.++.+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHH
Confidence 34555666678899999999998888888888899999999999999999998887 45578899999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcc--cchhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccccccccCC
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
...++.-.|-..|..++..+++. .++...-.+.-....+..++.+++ |..++..-...++++. .
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fL-P~v~rSl~f~~~~~~~---------~---- 199 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFL-PRVKRSLYFHRLEDKI---------S---- 199 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhC-CCCchhhhhhcccccc---------e----
Confidence 99999999999999999888753 334444444433333333333333 4321110000000000 0
Q ss_pred CccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh
Q 014646 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..+.++... ..+...-........++++++..+||.+....+-+.+...+++-+.+|....-++.. .++..
T Consensus 200 ----v~~~e~~~~----~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~ 270 (433)
T KOG3810|consen 200 ----VGDLEEMNP----QASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPAN 270 (433)
T ss_pred ----eccchhcCc----cchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchh
Confidence 000000000 000000000233344556777788999888888888888888888777776655543 22211
Q ss_pred H---HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch
Q 014646 242 M---MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ~---~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
. ..-++..+.+.++.+..|.+--.+.|+.. .++..+...-+...+.+...++.|...+...+.........+..
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~---~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA 347 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD---LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIA 347 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhH---HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHH
Confidence 1 11234445566677777777554444311 34445555555566666667788887777777777777777777
Q ss_pred hhhhhcccCcchhHHHHHHHHHH
Q 014646 319 NYVCLHSVKPSLRALSMAISTVS 341 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~ 341 (421)
...++.....|.-|...|+.++.
T Consensus 348 ~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 348 TFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHHHHHhhhhhhheeeeehHHHH
Confidence 77778888888889999987433
No 199
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.05 E-value=6.3e-09 Score=92.86 Aligned_cols=187 Identities=10% Similarity=0.007 Sum_probs=142.6
Q ss_pred hhhhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccch
Q 014646 194 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNA 273 (421)
Q Consensus 194 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 273 (421)
+.....++.++....+++...+++.+.....+++=-++++..+.+........+...+.++.-++.+++.+|+|+-
T Consensus 361 ~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv---- 436 (618)
T KOG3762|consen 361 LADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV---- 436 (618)
T ss_pred HHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc----
Confidence 3444456677776666666666666666666666556677665443222333445566688888899999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhH
Q 014646 274 FKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+++..+..+...=++......++|..+.+-.+-+...+..+....+++....||+.++++.++.......+|--+|+++
T Consensus 437 -~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 437 -NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred -ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 7777777777777777778889999999999999999999999999999999999999999999888888899999999
Q ss_pred HHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 354 VGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 354 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
+|.+.+.++ -...|..+++.+++.++......
T Consensus 516 GG~~v~~fg-~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 516 GGFVVERFG-ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhheeeh-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999987 44677777766666665555443
No 200
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.04 E-value=2.7e-09 Score=99.71 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=103.2
Q ss_pred hccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHh--hchhHHHHHHHHHHHHHH
Q 014646 235 YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLV 311 (421)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 311 (421)
++.+.... .+.+...++..++.++.|++.||+|+| +.+..+.++..+..++... ..+.+..++.-++.|++.
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK-----WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhc
Confidence 34444333 345667788999999999999999998 6666665555444443322 233455566666777888
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
+...+....++.+.+|+++|++++++.+..... |.+++|.+.+.+.+...+|+..|++.++..++..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQL-GTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH
Confidence 888888889999999999999999999665665 8899999999998874348888888776655444443
No 201
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.04 E-value=3.1e-09 Score=81.50 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=95.2
Q ss_pred hHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhccc
Q 014646 247 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 326 (421)
Q Consensus 247 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (421)
...++..++.+..+++.||++|| +.+...........+.....++.+.......+.+++.+...+.......|..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34567788899999999999998 6666665555555555555566666666677777777777777888899999
Q ss_pred CcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHH
Q 014646 327 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (421)
|+++|+++.++.+...+. |..++|.+.+.+.+..+ ++..+.......+...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFIL 133 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHH
Confidence 999999999999766665 88999999999988755 656666655554444333
No 202
>PRK09952 shikimate transporter; Provisional
Probab=99.02 E-value=1.8e-08 Score=93.19 Aligned_cols=162 Identities=16% Similarity=0.143 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHhh--ccchhhHHHH-----hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHH
Q 014646 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIY--HMSNADMMFG-----GVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 279 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 279 (421)
....+.+++-..-...+....|.+..+.+ +.++...... .+..++..++.++.|++.||+||| +.+..
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr-----~~l~~ 99 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK-----RMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH-----HHHHH
Confidence 33333444433334444444554444433 3443322221 233455678888999999999999 77777
Q ss_pred HHHHHHHHHHHHHhhchhH--------HHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCch
Q 014646 280 ATFLGAISCLTAFCLSSLY--------GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+..+..+..++....++.. .+++.-.+.+++.+..++....++.|..|+++|+...+..+.... +|..+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~-~G~~l~~ 178 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYG-VGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHH-HHHHHHH
Confidence 7777777666666655543 244455667777777778888899999999999999888854444 4766666
Q ss_pred hHHHHhhhhh-------hchhhhhhHHHHH
Q 014646 352 PLVGVLQDHV-------NNWRKTTLALTSI 374 (421)
Q Consensus 352 ~~~g~l~~~~-------~~~~~~~~~~~~~ 374 (421)
.+...+.... -+|+..|++.+..
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVL 208 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence 5555544321 2477777765544
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=99.02 E-value=3.6e-08 Score=90.99 Aligned_cols=145 Identities=9% Similarity=0.029 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHH
Q 014646 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
..+.+.++...+.........|.+ ++.++.++.+. .......++..++.+..|++.||+||| +.+..+..+..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----~~l~~g~~~~~ 102 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH
Confidence 444454556666666677778876 66788886555 444777888999999999999999999 77777776666
Q ss_pred HHHHHH---HhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhh
Q 014646 286 ISCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 286 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
+..++. ...++.+.+++..++.+.+.+...+..+.++.+..+++.+...+++.+..... |..++|.+.+.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~-G~~~g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF-GAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 665443 23556777777778888888888888888887765556666678888655554 8888887766543
No 204
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=1.1e-08 Score=106.73 Aligned_cols=156 Identities=10% Similarity=0.028 Sum_probs=109.1
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh---HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhh
Q 014646 199 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFK 275 (421)
Q Consensus 199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 275 (421)
..++++.++.+++..++..+........+..+....++.+... ....++..++.+++.++.|+++||+||| +
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk-----~ 78 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN-----R 78 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH-----H
Confidence 3456777777776666666555444444444444444444322 2334566777889999999999999998 6
Q ss_pred HHHHHHHHHHHHHH---HHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchh
Q 014646 276 LLSAATFLGAISCL---TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 276 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
.+..+.++..+..+ +.....+.+.+++..++.+++.+...+....++.+.+|+++|++++|+.+..... |.++|+.
T Consensus 79 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-g~~lg~~ 157 (1146)
T PRK08633 79 VIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIV-AILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHH-HHHHHHH
Confidence 66655544333322 2223345666777777788888888888899999999999999999999666555 8899999
Q ss_pred HHHHhhhh
Q 014646 353 LVGVLQDH 360 (421)
Q Consensus 353 ~~g~l~~~ 360 (421)
+.+++.+.
T Consensus 158 l~~~l~~~ 165 (1146)
T PRK08633 158 LFSFLFES 165 (1146)
T ss_pred HHHHHHHh
Confidence 99998875
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.01 E-value=1.2e-08 Score=106.07 Aligned_cols=163 Identities=13% Similarity=-0.024 Sum_probs=106.8
Q ss_pred hhhchhhHHHHHHHHHHHHHHHHHHHH----HhhhHHHHhhccch-hh-HHHHhhHhHHHHHHHhHHHHHHHhhcccccc
Q 014646 199 VLLQEKVYVVNVLGYIAYNFVIGAYSY----WGPKAGYNIYHMSN-AD-MMFGGVTIVCGIVGTISGGFILDQMGATISN 272 (421)
Q Consensus 199 ~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 272 (421)
.+++++.+..+....++..+..+.... +....+.+..+.+. .. ....++..+..++..++.|+++||++||
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk--- 82 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA--- 82 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH---
Confidence 355666666666655555444332222 22211222221211 11 2333556677889999999999999998
Q ss_pred hhhHHHH---HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCC
Q 014646 273 AFKLLSA---ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 273 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
+++.. ..+......+.....++.+.++++.++.+.+.+...+...+++.+.+|++++++++|+.++.... |.++
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~i-g~~i 159 (1140)
T PRK06814 83 --KLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFI-AILL 159 (1140)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHH-HHHH
Confidence 54322 22222222222223367777788888888888888899999999999999999999999766666 9999
Q ss_pred chhHHHHhhhhhhchhhhh
Q 014646 350 SSPLVGVLQDHVNNWRKTT 368 (421)
Q Consensus 350 ~~~~~g~l~~~~~~~~~~~ 368 (421)
||.+.|++.+..+ +...+
T Consensus 160 gp~l~g~l~~~~~-~~~~~ 177 (1140)
T PRK06814 160 GTIIGGLATISGN-FVILV 177 (1140)
T ss_pred HHHHHHHHHhccc-cHHHH
Confidence 9999999998755 65555
No 206
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.99 E-value=2.7e-08 Score=91.13 Aligned_cols=162 Identities=14% Similarity=0.042 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhh-----cccccchhhHHHHHHHHHHH
Q 014646 212 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAI 286 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~ 286 (421)
.++.+.........-+|.|+++. |.+..+..+....... .+..++.|+++||+ |||+ +.+..+....++
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr----~~l~~~~~~~~l 80 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRR----GWLLLTQVGLAA 80 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcch----hHHHHHHHHHHH
Confidence 35566667777778899999985 6665555333222222 57789999999999 6652 345554544444
Q ss_pred HHHHHHhh---chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc
Q 014646 287 SCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 287 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 363 (421)
........ .+.+...+..++.+++.....++..+++.+.+|+++|+++.++....... |..+++.+.+.+.+...+
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~-g~i~g~~l~~~l~~~~~g 159 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRL-AMLVSGGLALWLADRVLG 159 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHH-HHHHHhHHHHHHHhcccC
Confidence 43333333 23444444444555666666777888999999999999999999654444 888888888888886445
Q ss_pred hhhhhhHHHHHHHHHHH
Q 014646 364 WRKTTLALTSIFFLAAG 380 (421)
Q Consensus 364 ~~~~~~~~~~~~~~~~~ 380 (421)
|+..|++.+...++...
T Consensus 160 w~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 160 WGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888877766544333
No 207
>PTZ00207 hypothetical protein; Provisional
Probab=98.99 E-value=3.9e-08 Score=92.07 Aligned_cols=154 Identities=15% Similarity=0.071 Sum_probs=96.3
Q ss_pred HHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-----
Q 014646 220 IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----- 294 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 294 (421)
.+.+..+.|. +++.++.+..+.......+.......+..|++.||+|+| +.+..+.++..+..++....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3455555564 466688886554322111222234556789999999999 77777777666666555443
Q ss_pred -chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccC-CchhHHHHhhhhhhchhhhhhHHH
Q 014646 295 -SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV-PSSPLVGVLQDHVNNWRKTTLALT 372 (421)
Q Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~~~~~~~ 372 (421)
.+.+.+.+..++.+.+.+...+.....+.+.+ |++||.+.|+.....+. |++ ++++..+++.+ ++...+++.+
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l~ 191 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFLM 191 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHHH
Confidence 35666666666777776666666666677766 58899999999777776 665 45555555444 2445666666
Q ss_pred HHHHHHHHHhhh
Q 014646 373 SIFFLAAGIWFV 384 (421)
Q Consensus 373 ~~~~~~~~~~~~ 384 (421)
...++..++...
T Consensus 192 vl~~vv~ll~~~ 203 (591)
T PTZ00207 192 SFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHh
Confidence 555554444443
No 208
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.98 E-value=8e-10 Score=100.94 Aligned_cols=118 Identities=8% Similarity=0.006 Sum_probs=93.3
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHH--hhhcc--cchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCc
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+..++.++.|+++||+|||+.+..+..+..+.. +...+ .++.+.+.+..++.|++.+...+...+++.|.+|+++|
T Consensus 267 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 346 (394)
T TIGR00883 267 LFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVR 346 (394)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccce
Confidence 456788899999999999998775554444333 12222 35677777888999999988999999999999999999
Q ss_pred hhHHHH-HHhHHHHHhHHHHHHHHHhhcccc-hhHHHHHhHHHH
Q 014646 79 TAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILM 120 (421)
Q Consensus 79 ~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~ 120 (421)
++++++ ++.+..+|..++|.+++.+.++.| |++.++...+..
T Consensus 347 ~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 347 YTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 999998 456677899999999999999888 988877776543
No 209
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.97 E-value=4e-08 Score=90.83 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=85.1
Q ss_pred hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchh--------HHHHHHHHHHHHHHhccccc
Q 014646 246 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--------YGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 317 (421)
....++..++.++.|+++||+||| +.+..+.....+..+.....++. ..+++.-++.|++.+..++.
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRK-----KSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 334455669999999999999999 87777777776666655444432 23445556777777888888
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh--------hhhchhhhhhHHHHHH
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD--------HVNNWRKTTLALTSIF 375 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~--------~~~~~~~~~~~~~~~~ 375 (421)
...++.|..|+++|+.+.++.+..... |..+++.+...+.. .. +|+..|++.++..
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~-gWr~~F~i~~~~~ 208 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIG-GQLLALLVVVVLQQTLEDAELREW-GWRIPFALGAVLA 208 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHH
Confidence 899999999999999999887544443 65665544433321 22 4888887655543
No 210
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.96 E-value=7e-08 Score=90.39 Aligned_cols=174 Identities=14% Similarity=0.011 Sum_probs=113.2
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhh-----cccccchhh
Q 014646 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFK 275 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~ 275 (421)
.++++...+....+............+|.++++. +.+..+.......... .++.++.+.++||+ |||+ .
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr----~ 82 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRR----G 82 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCch----H
Confidence 3555566656656666666767777788887774 5554333332222222 25789999999999 7662 2
Q ss_pred HHHHHHHHHHHHHHHHHhh---chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchh
Q 014646 276 LLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
.+..+.+...+........ .+.+...+...+.+++.+...++...+..|.+|+++|+++.++....... |.++++.
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~l-G~llg~~ 161 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRL-AMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHH-HHHHHHH
Confidence 3444444444443333222 24445555556666677777777788899999999999999999655554 8888898
Q ss_pred HHHHhhhhhhchhhhhhHHHHHHHHHHHH
Q 014646 353 LVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 353 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (421)
+.+++.+...+|+..|++.+...++....
T Consensus 162 l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 162 LALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88888884335888888877665554433
No 211
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.95 E-value=1.1e-08 Score=87.99 Aligned_cols=134 Identities=13% Similarity=0.102 Sum_probs=113.5
Q ss_pred HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhh
Q 014646 244 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 323 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (421)
+.....+.+++.+++.|.+.||+|+| ..++++..+.....+++.+.++.+..++.=.+-+.+.........++++
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlA 185 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLA 185 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHH
Confidence 33566788899999999999999999 7788888888888888887788877777778888888888888999999
Q ss_pred cccCcc-hhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhh
Q 014646 324 HSVKPS-LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 324 ~~~~~~-~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
+.+|++ .|++++|+.-.+... |-.+||+++|.++|..| +..+|.++++++++-..+-+.
T Consensus 186 d~f~~d~er~~vmGialgfisl-G~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISL-GVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhc-cceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHh
Confidence 999985 689999999666555 99999999999999987 779999999888777766554
No 212
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.94 E-value=3.5e-08 Score=89.65 Aligned_cols=156 Identities=14% Similarity=0.054 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHH
Q 014646 213 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 291 (421)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (421)
++.+......+..++|.|+++. +.+.... ...++..+...++.++.|.+.||++|+....+... ...... .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~-g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~-~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQ-GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLA-LLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHH-HHHHHH--HHHHH
Confidence 4555566677777889999774 5565444 44567778889999999999999998522111222 111111 11222
Q ss_pred HhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHH
Q 014646 292 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 371 (421)
...++.+..++...+.+.+.+...+.......+. .++|+++.+....... +|..++|.+.+++.++.| |+..++..
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~-lg~~igp~lgg~l~~~~g-~~~~f~~~ 164 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGS-IAFVIGSALTGKLVSWFG-EQAILWIL 164 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHH-HHHHHHHHHHHHHHHHcC-hhHHHHHH
Confidence 2235566555555556666666666555555443 4567778888765555 499999999999999876 77777766
Q ss_pred HHHHH
Q 014646 372 TSIFF 376 (421)
Q Consensus 372 ~~~~~ 376 (421)
+...+
T Consensus 165 ~~~~~ 169 (382)
T PRK11128 165 TAGVA 169 (382)
T ss_pred HHHHH
Confidence 54433
No 213
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.94 E-value=4.5e-08 Score=89.69 Aligned_cols=143 Identities=13% Similarity=0.014 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHh----hcccccchhhHHHH-HH
Q 014646 208 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSA-AT 281 (421)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~-~~ 281 (421)
......+..++.+.....+++.|+++ .+.++... ....+..+.+++..++.|+++|| +||| +..+. ..
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR-----rp~il~g~ 81 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR-----RPFIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh-----HHHHHHHH
Confidence 33444455566676777778888765 56665444 34466678889999999999995 8888 44433 33
Q ss_pred HHHHHHHHHHHhhchh-----------------HHHHHHHHHHHHHHhccccchhhhhhcccCcchh--HHHHHHHHHHH
Q 014646 282 FLGAISCLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSI 342 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~ 342 (421)
....+...++...++. +..++.+.+..+..+...++..+++.|..|+++| +.+.++.+...
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~ 161 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFM 161 (477)
T ss_pred HHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHH
Confidence 3333343333332221 2223344445567777888889999999998754 57888886666
Q ss_pred HHhccCCchhHHHHh
Q 014646 343 HIFGDVPSSPLVGVL 357 (421)
Q Consensus 343 ~~~g~~~~~~~~g~l 357 (421)
+. |+++++.+.+..
T Consensus 162 ~l-G~ilg~~~g~~~ 175 (477)
T TIGR01301 162 AI-GNVLGYAAGAYS 175 (477)
T ss_pred HH-HHHHHHHHHHHH
Confidence 65 888888776654
No 214
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.94 E-value=5.8e-09 Score=96.01 Aligned_cols=128 Identities=16% Similarity=0.245 Sum_probs=110.7
Q ss_pred cccchhhHHHhhhhhcCch--HHHHHHHHHHHHHHhhhcc--------cchhHHHHHHHHHhhhhhhhhccccccccccc
Q 014646 3 GLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
..++|++++|++.||+|.| +++.++++++.+..+...+ .++-+.+.+.-++.|+..|..++...++.+|.
T Consensus 329 ~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~L 408 (477)
T PF11700_consen 329 VAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRL 408 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 3567899999999999999 8999988888666666555 67888999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccc-hhHHHHHhHHHHHHHHHHHHhc
Q 014646 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
.|+++.+..+|++....-....+||++.+.+.+..| -|+.+....++.++..++.+++
T Consensus 409 iP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 409 IPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999998776 8888888777766655555443
No 215
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.93 E-value=2.1e-08 Score=87.35 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
++++...+.........+......+ .+.+.++.++.+. .+..++.+.+.+.++..|.+.||+|.| ++...+.+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR-----~~~~~s~~ 87 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR-----KWTILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch-----HHHHHHHH
Confidence 4444444433333333333333333 3447788887666 556888899999999999999999999 77777777
Q ss_pred HHHHHHHHHHhhchh---HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 283 LGAISCLTAFCLSSL---YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+..+.++........ +.++++-.+.++ .+..+......++..+|+|++|.++|++ ...|. |..+...+.+.+..
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~AlGI~-g~GN~-G~av~q~~~P~v~~ 164 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLALGIA-GAGNL-GVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHHHHh-ccccc-cHHHHHHHHHHHHH
Confidence 766666555444322 244444444433 3455666778889999999999999999 46666 88888888888888
Q ss_pred hhhc--hhhhhhHHHHHHHHHH
Q 014646 360 HVNN--WRKTTLALTSIFFLAA 379 (421)
Q Consensus 360 ~~~~--~~~~~~~~~~~~~~~~ 379 (421)
..+. |+....+.....++..
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~ 186 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAA 186 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHH
Confidence 7662 5555555554444433
No 216
>PRK15075 citrate-proton symporter; Provisional
Probab=98.93 E-value=4.8e-08 Score=90.35 Aligned_cols=159 Identities=13% Similarity=0.089 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh--HHHHhh-----HhHHHHHHHhHHHHHHHhhcccccchhhHH
Q 014646 205 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD--MMFGGV-----TIVCGIVGTISGGFILDQMGATISNAFKLL 277 (421)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 277 (421)
......+..++...-...+....|...++ ++.++.+ ...... ..+...++.++.|++.||+||| +.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr-----~~l 89 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR-----KGL 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH-----HHH
Confidence 34445555666666677777778876665 4544322 121111 1222346788999999999999 777
Q ss_pred HHHHHHHHHHHHHHHhhchhHH--------HHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCC
Q 014646 278 SAATFLGAISCLTAFCLSSLYG--------FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
..+..+..+...+....++.+. +++.-++.+++.+...+....++.|.+|+++|++++++.+...+. |..+
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~-g~~~ 168 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV-AVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH-HHHH
Confidence 7777666666665555555432 234445566666666666778899999999999999998655554 6666
Q ss_pred chhHHHHhh--------hhhhchhhhhhHH
Q 014646 350 SSPLVGVLQ--------DHVNNWRKTTLAL 371 (421)
Q Consensus 350 ~~~~~g~l~--------~~~~~~~~~~~~~ 371 (421)
++.+.+.+. +..| |+..|++.
T Consensus 169 g~~~g~~l~~~~~~~~~~~~g-Wr~~f~~~ 197 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWG-WRIPFLIG 197 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccc-hHHHHHHH
Confidence 665555542 3333 77777653
No 217
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.92 E-value=3.8e-09 Score=97.97 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=92.1
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc-chhHHHHHHHHHhhhhhhhhcccccccccccCC------
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAPFIDDNAP------ 74 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~------ 74 (421)
++.+++.+++++++||+|+|+++.++.++.+++.+...+. ++.+.+++..++.|++.+...+...++++|..|
T Consensus 268 i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (437)
T TIGR00792 268 VAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKT 347 (437)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence 3456788999999999999999999998888887776665 456777788889999999888888899988865
Q ss_pred -CCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccch
Q 014646 75 -VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 75 -~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 109 (421)
++++|..+++.+....+|..+++.+.+.+.+..||
T Consensus 348 ~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 348 GVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45679999999999999999999999999876665
No 218
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.90 E-value=7.8e-08 Score=78.22 Aligned_cols=290 Identities=13% Similarity=0.127 Sum_probs=151.4
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhccccccc-ccccCCCCCc-hhH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF-IDDNAPVPQK-TAW 81 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~~~r-~~~ 81 (421)
..+...+.|.++|+-|||+.-+.-++.+.++++ .-.+++|-.++++|.+.|+..+..+..--++ +.|..+++.- ...
T Consensus 85 smLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqW 163 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQW 163 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhh
Confidence 345667889999999999975555555544433 3467889999999999999999887776654 6666533211 111
Q ss_pred HH-HHH----hHHHHHhHHHHHHHHHhhccc--chhHHHHHhHHHHHHHHHHHHhcccccccccCCcccccchhhhcccc
Q 014646 82 LS-MFY----MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 82 ~~-~~~----~~~~~G~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
.+ -+. .+..+=.+++.+.+..+.+.+ |--.+|-..+.+..+...+.+ ..+....+++.+.+..
T Consensus 164 ls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil---~~W~ENygdps~~kdl------- 233 (454)
T KOG4332|consen 164 LSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL---SSWSENYGDPSENKDL------- 233 (454)
T ss_pred hhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH---hhhhhccCChhhhHHH-------
Confidence 11 111 222333344555555555544 344455444332222222211 2222122222222111
Q ss_pred cccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHHH-HHHHHHHHHHhhhHHHH
Q 014646 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY-NFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (421)
..++....+.+..++++..+.....++ ...+..+..|.|..--+
T Consensus 234 -----------------------------------ltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn 278 (454)
T KOG4332|consen 234 -----------------------------------LTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 278 (454)
T ss_pred -----------------------------------HHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCC
Confidence 111222344555666655544333333 33333344566654322
Q ss_pred hhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh-------chhHHHHHHHHH
Q 014646 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALFTV 306 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 306 (421)
..+.+ ....+ +...+..++|+-+..++..|-..+ ....+.+..++....+.+.... .+...-.+.+++
T Consensus 279 ~e~iP-hGfiF-atFMlASmLGSSla~Rl~s~s~~~---ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~ 353 (454)
T KOG4332|consen 279 DEEIP-HGFIF-ATFMLASMLGSSLASRLLSRSSPK---VESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCL 353 (454)
T ss_pred cccCC-chhHH-HHHHHHHHHhhHHHHHHHhcCCcc---cchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHH
Confidence 22222 22222 233455566666655555543332 2233444443333333322211 133344667777
Q ss_pred HHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHH
Q 014646 307 GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
.-.+.+..+|...-+-.+.+|.+.|++.+-+...-.+.
T Consensus 354 ~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 354 FEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 78888999999999999999999998777665443344
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.90 E-value=5.9e-07 Score=85.84 Aligned_cols=125 Identities=18% Similarity=0.161 Sum_probs=101.5
Q ss_pred chhhHHHhhhhh-cCchHHHHHHHHHHHHHHhhhcccch--------hHHHHHHHHHhhhhhhhhcccccccccccCCCC
Q 014646 6 VASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFD--------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 ~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+..+++|.++|+ +||++.+.++.++..++.++.+++.. ....+++-.+..+|.|+.-|...+...|.++++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 467789999997 69999999999999999988776421 233566778888899999999999999999864
Q ss_pred C---chhHHHHHHhHHHHHhHHHHHHHHHhhcc-------cchhHHHHHhHHHHHHHHHHHHhc
Q 014646 77 Q---KTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 77 ~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+ |-..+.++..+.++|..+++.+..++.+. .+|...|.+.++..++..++....
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 3 66788999999999999999999888743 369999999988877766655543
No 220
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.86 E-value=1.9e-08 Score=96.58 Aligned_cols=126 Identities=8% Similarity=-0.056 Sum_probs=89.7
Q ss_pred HHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc-------------
Q 014646 230 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 295 (421)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 295 (421)
-+++.++.+..+. .+.+...++..++.++.+++.||.+|+ +.+..+.++.++..++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4455677775444 445677888999999999999999998 555555544444444332221
Q ss_pred --------------------------------------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHH
Q 014646 296 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 337 (421)
Q Consensus 296 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (421)
....+++.-++.|++.+..++....++.|.+|+++|+...++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 122344566667777777778888999999999999999999
Q ss_pred HHHHHHHhccCCchhHHHHhhhhh
Q 014646 338 STVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 338 ~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+..... |..+|+.+.+++.+..
T Consensus 213 ~~~~~~i-G~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 213 LESIAVF-GPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHh-hhHHHHHHHHHHHhcc
Confidence 9655444 8899998888887643
No 221
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.85 E-value=6.8e-08 Score=86.90 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=96.8
Q ss_pred HHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHH
Q 014646 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (421)
...+|.+.+ .++.+.... ...+...++..++.++.|++.||+|+| +.+..+..+.....+.. ..++.+.+++
T Consensus 20 ~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 20 GPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-----RSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred cccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-----HHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 345565554 467775554 445778889999999999999999998 66665555544444433 4455555555
Q ss_pred HHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc-hhhhhhHHHHH
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSI 374 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~~ 374 (421)
...+.+++.+...+.......+.. +++|++++++.+..... |..+++.+.+.+.+..+. |+..+...+..
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMG-GAALAAAATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 556666666655555566666666 46899999999766555 888888888888876543 66666555443
No 222
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.83 E-value=8.9e-08 Score=86.21 Aligned_cols=150 Identities=13% Similarity=-0.008 Sum_probs=94.1
Q ss_pred HHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhh-----cccccchhhHHHHHHHHHHHHHHHHHhh---
Q 014646 223 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAISCLTAFCL--- 294 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (421)
.....|.+.++ .|.+..+..+.....+...+ .++.|.++||+ |||+ .++..+.+...+......+.
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~----~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRR----SWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccH----HHHHHHHHHHHHHHHHHHcCCcc
Confidence 33456666665 56775555433322333333 88999999998 5551 33444444444443333333
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc-------hhhh
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-------WRKT 367 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-------~~~~ 367 (421)
.+.+.+.....+.+.+.....++..+++.|.+|+++|+.+.++....... |.++++.+.+.+.+..+. |+..
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRA-GMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHH-HHHHHHHHHHHHhhhcccccccccccHHH
Confidence 23333444444455555566677788899999999999999999655555 889899898888877653 7777
Q ss_pred hhHHHHHHHHHH
Q 014646 368 TLALTSIFFLAA 379 (421)
Q Consensus 368 ~~~~~~~~~~~~ 379 (421)
|++.++..++..
T Consensus 160 f~i~ai~~l~~~ 171 (356)
T TIGR00901 160 FFWTALLILPGL 171 (356)
T ss_pred HHHHHHHHHHHH
Confidence 777766554433
No 223
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.83 E-value=1.5e-08 Score=92.33 Aligned_cols=122 Identities=10% Similarity=-0.035 Sum_probs=93.1
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcc------cchhHHHHHHHHHhhhhhhhhcccccccccccCCC-C
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV-P 76 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~ 76 (421)
..++.++.|++.||+|+|+.+..+..+.++..+.... .++...+.....+.+++.+...+...+.+.+..++ +
T Consensus 257 ~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (390)
T TIGR02718 257 VLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD 336 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 4456788999999999999988877665333322211 23344445556666777777777777777777776 7
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHH
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 125 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 125 (421)
++++.++..+...++|..+||.++|.+.+..||+..|++.+++.++..+
T Consensus 337 ~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 337 QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988876655443
No 224
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.83 E-value=1.3e-08 Score=86.62 Aligned_cols=123 Identities=7% Similarity=-0.010 Sum_probs=95.3
Q ss_pred chhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHH
Q 014646 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
-|.++.+.+.||+|||+++..+.+++++..++...+.+-....+.-+..-+..++.+.+.+.|..|.+|.+-|+...|.-
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtc 475 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTC 475 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhh
Confidence 36789999999999999999999999999988877765444433334444444556678899999999999999999999
Q ss_pred HhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 86 YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 86 ~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+...-+|.++.|.++ +....+-..+..+.+.+.++.+++..++
T Consensus 476 SsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 476 SSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheee
Confidence 999999999999999 3322344556666666666666666655
No 225
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.82 E-value=1.7e-08 Score=89.56 Aligned_cols=128 Identities=11% Similarity=0.153 Sum_probs=112.6
Q ss_pred chhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHH
Q 014646 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
+.-.+..++.+|+|.|+.++++..+.++=.++++++++.+.+.+.+.+.|+..+........|+.+.+|+|-..+...+.
T Consensus 274 ~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 274 LMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 34467789999999999999999999999999999999999999999999999999999999999999998877888774
Q ss_pred -HhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccc
Q 014646 86 -YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 86 -~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
+...++|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+.+++
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 788999999999999999999999999999999988888888888754
No 226
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.79 E-value=6.4e-08 Score=86.33 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=129.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc----cchhhH-HHHhhHhHHHHHHHhHHHHHHHhh-cccccchhhH
Q 014646 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKL 276 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~ 276 (421)
.|.++.+...-+.--++++++-..+..|+....+ .++.++ .+...+..-.-+..+++||++||+ |+| +.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~t 94 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RT 94 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HH
Confidence 3445556666677788888888888888887777 775444 222333322335678999999995 777 77
Q ss_pred HHHHHHHHHHHHHHHHhh--chhHHHHHHHHHHHHHHhccccchhhhhhcccCcc--hhHHHHHHHHHHHHHhccCCchh
Q 014646 277 LSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
+..+.++..+..+.+... .....+.+.+.+...+.+..=+....+..+.+|++ +|..+.++..+..+. |+.++|.
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl~~p~ 173 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSLIAPI 173 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHHHHHH
Confidence 777777777766666555 34556666666777888888888888999999884 577778887777787 8999999
Q ss_pred HHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 353 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 353 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
+.+++.++.| |...|...+..+..+.+.+...+
T Consensus 174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999977 88888888888777777766544
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.72 E-value=1.9e-07 Score=82.07 Aligned_cols=99 Identities=20% Similarity=0.221 Sum_probs=74.5
Q ss_pred cchhhHHHhhhhh----cCchHH-HHHHHHHHHHHHhhhcccchhH-----------------HHHHHHHHhhhhhhhhc
Q 014646 5 LVASPIFASLAKS----HNPFRL-IGVGLSVWTFATAGCGSSFDFW-----------------SIAICRMLVGVGEASFI 62 (421)
Q Consensus 5 ~~~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~ 62 (421)
.+.+|+.|..+|| |||||. +..+.+..+++.++..++.++. .++++--+.-+..-...
T Consensus 81 ~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~q 160 (498)
T KOG0637|consen 81 LLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQ 160 (498)
T ss_pred ceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhh
Confidence 4668899999995 788886 4556667777888888876543 23333334444555777
Q ss_pred ccccccccccCCCCCchh-HHHHHHhHHHHHhHHHHHHHHHh
Q 014646 63 SLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 63 ~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
..+-+++.|...++++.+ +++++.....+|..+|+.+++++
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 788999999998776666 99999999999999999988754
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.7e-06 Score=75.20 Aligned_cols=133 Identities=11% Similarity=0.035 Sum_probs=102.4
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH---hhchh
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLSSL 297 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 297 (421)
...--+-..+++.++.+..+. .+......+..+.++..+++.+|+|+| .-++.+..+.++.+.+.. ...+.
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y 104 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSY 104 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 333334445778888886555 445677788899999999999999999 777777777777776664 33455
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
..++...++.+.+.+......+.++...-+++..+.-+.+...+... |.+++|.+.+.+..+
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lils 166 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHh
Confidence 66677777888888888888888999988888888888888656555 999999999998873
No 229
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.67 E-value=1.2e-07 Score=89.95 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=109.6
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhh
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
...++..++..+|.++.|.++||+||| +.+..+.++..++.+.....++.+.+++.=++.|++..........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 445777889999999999999999999 889999988888888888899999999999999999999999999999
Q ss_pred hcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.|.+++++|+.+..+ ...... ++..++...+++.. +|+..++..........+..
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLW 251 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 566666 55667878888777 47777777766655554443
No 230
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.66 E-value=9.8e-08 Score=84.14 Aligned_cols=119 Identities=21% Similarity=0.348 Sum_probs=98.3
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccch--hHHHHHHHHHhhhhhhhhcccccccccccCCC-CCch
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVGVGEASFISLAAPFIDDNAPV-PQKT 79 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~ 79 (421)
+..+++++.|.++||+|||+.+..+.....++.+..++..+ .+.+++.|+++|++.+...+...+++.|+.|+ ++|+
T Consensus 51 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (338)
T COG0477 51 GYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERG 130 (338)
T ss_pred HHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHH
Confidence 44566789999999999999888888776666677777766 89999999999999999999999999999998 6789
Q ss_pred hHHHHHHh-HHHHHhHHHHHHHHHhhcc--cchhHHHHHhHHHHH
Q 014646 80 AWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILML 121 (421)
Q Consensus 80 ~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~gwr~~f~~~~~~~~ 121 (421)
...+.... ...+|..+++.+++.+... .+||+.|.+......
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 131 LAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 99998888 5888889998877776643 579997777665543
No 231
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.65 E-value=1.7e-07 Score=84.64 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=101.8
Q ss_pred hhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc-chhHHHHH----HHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 7 ASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAI----CRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 7 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~----~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+ ...++|+..+..+.+...++.+..|++.|+++
T Consensus 259 ~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~ 338 (400)
T PF03825_consen 259 FFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATA 338 (400)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHH
Confidence 34577899999999999999999999988888877 55444333 35579999999999999999999999999999
Q ss_pred HHHHHh-HHHHHhHHHHHHHHHhhcccc------hhHHHHHhHHHHHHHHHHHHhccc
Q 014646 82 LSMFYM-CIPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVLAFVIKP 132 (421)
Q Consensus 82 ~~~~~~-~~~~G~~~g~~~~~~l~~~~g------wr~~f~~~~~~~~~~~~~~~~~~p 132 (421)
.++++. ..++|..+|..++|++.+++| |...+.+.+++.++..++.+++.+
T Consensus 339 Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 339 QGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999876 468999999999999998765 445666666666665555555543
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.9e-07 Score=84.39 Aligned_cols=145 Identities=19% Similarity=0.286 Sum_probs=113.0
Q ss_pred hccchh-hHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc--hhHHHHHHHHHHHHHH
Q 014646 235 YHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLV 311 (421)
Q Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 311 (421)
+.++.. ...+.+....+.+++.+.++++.||+|.| +++..+.++..+..++..... +.+.+++.=++.|++.
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 444433 33445667889999999999999999999 888777777777666555443 3345566777788888
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
+..++....+..+-.|+++|++..++.....+. |.+++-++.|++.+...+|+..|++.+.+.++..++++..
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999655555 8888888999999984449999999988877776666543
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=5.7e-08 Score=86.92 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=116.1
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
|-++.-++.+++..|+|+-+++.+++.+..+=.+..+..+|.|+.+-..+++|+..+..+.+..+|++...||+-|..+.
T Consensus 418 gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q 497 (618)
T KOG3762|consen 418 GEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQ 497 (618)
T ss_pred chHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHH
Confidence 44556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-hHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcc
Q 014646 83 SMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 83 ~~~~-~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
++.+ ...++|--+|.+++|.+.+.++=|..|.+.++.+++..++...+-
T Consensus 498 ~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 498 GLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9875 456789999999999999999999999999988877766655543
No 234
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.64 E-value=4.7e-08 Score=85.22 Aligned_cols=117 Identities=13% Similarity=0.104 Sum_probs=103.6
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
.+++++++|++.||+|.|+++..++++..+.++..-+...-..+.++-.+.|...|..+..+.++..+.+|+++-++.+|
T Consensus 301 A~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFg 380 (438)
T COG2270 301 AALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFG 380 (438)
T ss_pred HHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceee
Confidence 46789999999999999999999999999999988888887788888899999999999999999999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcccc-hhHHHHHhHHHH
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILM 120 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~g-wr~~f~~~~~~~ 120 (421)
+++...-.+..+||.+.+.+.+..| -|..+....++.
T Consensus 381 lyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll 418 (438)
T COG2270 381 LYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLL 418 (438)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 9999999999999999998876443 566665555443
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.63 E-value=6.1e-07 Score=82.57 Aligned_cols=135 Identities=20% Similarity=0.172 Sum_probs=106.5
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhh
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
....+..++.+++.+.++.+.||++-. +.+....++-.+..++....++.+.+++.-++.|++.+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 344778899999999999999999955 666666655555555555578888999999999999999999999999
Q ss_pred hcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh-----hhhchhhhhhHHHHHHHHHHHHhh
Q 014646 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..-+.+++|+.-+|+.+...+. |+++|+.+...+.. ...+|++.|++.+++.+...++.+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999999999999999766555 88888877766532 123588999988877666665444
No 236
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.63 E-value=3.4e-07 Score=83.19 Aligned_cols=131 Identities=14% Similarity=0.008 Sum_probs=102.5
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc----hh--H---HHHHHHHHhhhhhh-hhcccccccccccCC
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DF--W---SIAICRMLVGVGEA-SFISLAAPFIDDNAP 74 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~--~---~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~ 74 (421)
.+..+++..+.||+|||+.++.+..+..+..+++.... .. | ..+++.++..++.+ +..|...-+.+|.+|
T Consensus 319 ~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~ 398 (485)
T KOG0569|consen 319 LLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFP 398 (485)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC
Confidence 46778899999999999999999999988888776542 11 1 12334444444333 246777888999999
Q ss_pred CCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhccccccc
Q 014646 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 136 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 136 (421)
++.|..++++......+...+-......+.+..|- +.|+...++++...+..++.+||+..
T Consensus 399 ~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 399 QSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 99999999999999998888877777777777665 78888888889999999999999653
No 237
>PRK09848 glucuronide transporter; Provisional
Probab=98.61 E-value=1.1e-07 Score=88.35 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=89.6
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc--hhHHHHHHHHHhhhhhhhhcccccccccccCCCC----
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---- 76 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---- 76 (421)
+..++.++++++.||+|+|+++.++.++..++.+...+.+ +++.+++..++.|+|.+...+...++..|..|.+
T Consensus 276 ~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~ 355 (448)
T PRK09848 276 GTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLT 355 (448)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 3456788999999999999999999998888877776654 6677777888999999999999999998888754
Q ss_pred ---CchhHHHHHHhHHHHHhHHHHHHHHHhhcccch
Q 014646 77 ---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 77 ---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gw 109 (421)
++|..++..+....+|..+|+.+.+.+.+..|+
T Consensus 356 g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 356 GVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 458999999999999999999998887654444
No 238
>PRK09669 putative symporter YagG; Provisional
Probab=98.58 E-value=1.8e-06 Score=80.22 Aligned_cols=149 Identities=17% Similarity=0.035 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 211 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
+.....+.....+..|++.|+.+..+.++..... ..+.-+...+..++.|+++||.+.|..++++.+..+....++...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 3334445555666788999999999999765533 355667788999999999999765544444666555444444443
Q ss_pred HHHhhch------hHHHHHHHHHHHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 290 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 290 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
+....++ .....+...+...+......+..++..+..++ ++|.+..+........ |..+++.+...+...
T Consensus 96 l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~-G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 96 LTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFI-GGLIVSVIALPLVDI 172 (444)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 3333321 12223333344445555666667777776643 7888887877544444 666666544444433
No 239
>PRK11462 putative transporter; Provisional
Probab=98.58 E-value=3.2e-06 Score=78.62 Aligned_cols=151 Identities=13% Similarity=0.042 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHH-HhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHH
Q 014646 211 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
+.-+..+........|+..|+.+..+.++..... ..+.-+...+.-++.|+++||...|..++|..+..+....++.+.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 3344455666677788999999999999755533 345557778889999999998766655555666666555555554
Q ss_pred HHHhhch------hHHHHHHHHHHHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 290 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 290 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
+++..++ .....+...+...+......|..++..+..++ ++|++.++........ |..+++.+...+.+..|
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~i-G~~~~~~~~~plv~~~g 174 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATA-GGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence 4443331 12233344445566666777778888887775 7999999988544444 76666666555544433
No 240
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.57 E-value=4.1e-06 Score=69.67 Aligned_cols=126 Identities=10% Similarity=0.059 Sum_probs=92.4
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc-------chhHHHHHHHHHhhhhhhhhcccccccccccCCC
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
|..+ +++.|.+.|++|++.++.+|.+...+|..+..++ .++|.+.+..++.|.+.+....++.....+.+|.
T Consensus 49 G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 49 GSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred Hhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 4444 4788999999999999999999999988876543 4688888889999988887777777777788885
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+||.+.++.-...+++..+-..+...+.+.-.-+..+++...+.++..+..++.
T Consensus 128 -~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 128 -SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred -ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 699999999999999887766666555544333444444433343433344444
No 241
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.56 E-value=6.6e-05 Score=69.14 Aligned_cols=229 Identities=14% Similarity=0.122 Sum_probs=129.1
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc---------ch----------------------hHHHHHHHHH
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------FD----------------------FWSIAICRML 53 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----------------------~~~l~~~r~l 53 (421)
.+...+..+++|+++|.+++-+....+.....+.++. ++ .|.+.+.-+.
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999877776666655555542 11 1111111122
Q ss_pred hhhhhhhhcc-cccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc---------ccchhHHHHHhHHHHHHH
Q 014646 54 VGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------HLNWRYAFWGEAILMLPF 123 (421)
Q Consensus 54 ~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---------~~gwr~~f~~~~~~~~~~ 123 (421)
.-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+...+.+ ...|...+.......++.
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~ 232 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLIL 232 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHH
Confidence 2222222222 346788999999999999999999999999999988888776 224654332222111111
Q ss_pred HHHHH---hcccccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhh
Q 014646 124 AVLAF---VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 200 (421)
Q Consensus 124 ~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (421)
.++.. ....+.... +++..+.. .. .+++ +......++++.+
T Consensus 233 g~~i~~~~~~~~~~vl~--~~~~~~~~-------------------------~~--~kk~-------k~k~s~~es~k~l 276 (491)
T PF03219_consen 233 GIVIILLYRYMNKNVLT--DPRFYPSA-------------------------KK--KKKK-------KPKMSLKESFKLL 276 (491)
T ss_pred HHHHHHHHHHHHHHccC--ccccchhh-------------------------hc--cccc-------CCCccHHHHHHHH
Confidence 11111 111111000 00000000 00 0000 1122334678889
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhh-H---HHHhhHhHHHHHHHhHHHHHHHhhccc
Q 014646 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-M---MFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
+++|.+..+++...+++...+.+..-.....++.+..+..- . .+....++..++..++++.+.+|+|-+
T Consensus 277 ~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 277 LKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999888888887777766665555555555433221 1 222444555555667778888888876
No 242
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.56 E-value=2.5e-07 Score=81.03 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=91.6
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.++.++.+..+++.||+|+||++.++..+..++.++....++...+ ..-++.|++.+..+|...+...+..|++ .+++
T Consensus 189 ~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~a 266 (310)
T TIGR01272 189 GGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQG 266 (310)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhh
Confidence 3577899999999999999999998888888877666655544333 3556889999999999999998888765 5566
Q ss_pred HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHH
Q 014646 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 118 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~ 118 (421)
.++. ....+|..++|.+.|.+.+..|.+..|++..+
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 6775 56668999999999999998899988885543
No 243
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.53 E-value=2e-06 Score=79.95 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=109.5
Q ss_pred HhhhHHHHhhccch-hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHH-
Q 014646 226 WGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL- 303 (421)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 303 (421)
+.+.+.++ ++.+. +..+..++......+..++.+.+.||+|.| ...+.+.++....+++..+..+.+.+++.
T Consensus 68 ~~~~~~~~-f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R-----~v~i~G~~v~~~g~~lssF~~~i~~l~lt~ 141 (509)
T KOG2504|consen 68 LFEELMDY-FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR-----TVMIAGGLVAALGLLLSSFATSLWQLYLTF 141 (509)
T ss_pred hHHHHHHH-hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34444443 44443 334556667777788889999999999999 88888888888888888888877665544
Q ss_pred HHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
-.+.|++.+..+.+...++.. +.+++|+.++|+.....+ +|.++-|.+.-++.+..| |+..++..+.+.+..+....
T Consensus 142 gvi~G~G~~~~~~paiviv~~-YF~kkR~lA~Gia~~GsG-~G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAVVILGT-YFEKKRALATGIAVSGTG-VGTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred HHHhhccchhhhcchhhhhhh-HhHHHHHHHHhhhhccCC-cceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHH
Confidence 445667777777777766664 568999999999954444 477877888888888877 77888877777655555544
Q ss_pred hhe
Q 014646 384 VGI 386 (421)
Q Consensus 384 ~~~ 386 (421)
..+
T Consensus 219 ~~r 221 (509)
T KOG2504|consen 219 LLR 221 (509)
T ss_pred HcC
Confidence 333
No 244
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.52 E-value=3.8e-06 Score=78.61 Aligned_cols=147 Identities=8% Similarity=0.006 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHH
Q 014646 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
.+..+..+.....+..|++.|+.+..+.++... ....+.-+...+..++.|+++||...|..++++.+..+....++.+
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 344455566677778889999999989886555 3335566777888999999999653332222355555555555554
Q ss_pred HHHHhhch------hHHHHHHHHHHHHHHhccccchhhhhhcccC-cchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 289 LTAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 289 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+++..++ .....+...+...+......+..+...+..+ +++|.+..+......+. |+.+.+.+...+
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~i-g~~~~~~~~~~~ 166 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASL-AGFVTAGFTLPF 166 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 44443221 1122333334455666677777788888774 58999988885444444 444444444333
No 245
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.50 E-value=0.00021 Score=64.34 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=40.5
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+..+.....+....+.-++..+|..-|+.|.+.|+..|. |+-.-..+.=++.|.+
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHHHHHHhhhc
Confidence 3344444455666677777888899999999999999998 7666555656666654
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=2.3e-06 Score=80.91 Aligned_cols=133 Identities=16% Similarity=0.099 Sum_probs=103.6
Q ss_pred HHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhh
Q 014646 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 321 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (421)
..+.+...++..++.++.|+++|++||| ..+..+.+...+..++.....+...+.+.=++.|++.+........+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 3666788899999999999999999999 88888888888888888888898889999999999999888888999
Q ss_pred hhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhh-hchhhhhhHHHHHHHHHHHH
Q 014646 322 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~ 381 (421)
..|..|++.||...+..+.... +|..++ .+.+...++. .+|+..+....+..+...+.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~-~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFIT-IGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHH-HHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976666 476665 4555555432 23665555544444433333
No 247
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.44 E-value=6.8e-07 Score=83.16 Aligned_cols=106 Identities=11% Similarity=0.019 Sum_probs=90.9
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc----------chhHHHHHHHHHhhhhhhhhccccccccccc
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----------FDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
+.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+...-++.+++.+........++.+.
T Consensus 300 ~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 379 (468)
T TIGR00788 300 GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARL 379 (468)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHh
Confidence 456788889999999999999999999999988664311 3444555677889999999999999999999
Q ss_pred CCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccc
Q 014646 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 108 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~g 108 (421)
.|+++++...++.+...++|..+++.+++.+.++.|
T Consensus 380 ~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 380 CPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999987666
No 248
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.42 E-value=1.6e-06 Score=80.20 Aligned_cols=148 Identities=15% Similarity=0.089 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhccchhhHH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH
Q 014646 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (421)
+...........+++.|+.+..+.++.... ...+..+...+..++.|.++||...|..+++..+..+....++...++.
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF 90 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh
Confidence 444555556667888889999898865443 3345557777888899999994333322223555555555555555444
Q ss_pred hh-c-------hhHHHHHHHHHHHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 293 CL-S-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 293 ~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
.. + ......+..++...+......+..++..+..++ ++|.+..+..+..... |..+...+.+.+.+..+
T Consensus 91 ~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~-g~~l~~~~~~~l~~~~g 168 (428)
T PF13347_consen 91 SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMI-GSLLASFLAPILVSWFG 168 (428)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHH-HHHHHHHHhhhhhhhhc
Confidence 33 2 111224444455667777777888888888875 6899999988554444 66555556666665554
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.41 E-value=3.4e-06 Score=76.29 Aligned_cols=109 Identities=19% Similarity=0.196 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHhhhcccc---h------hHHHHHHHHHhhhhhhhhcccccccccccCCCC---CchhHHHHHHhHH
Q 014646 22 RLIGVGLSVWTFATAGCGSSF---D------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 89 (421)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 89 (421)
|+++++.++..+|.++..++. + .+.++++-++.++|.|+.-|...++.+|.++++ +|.+.+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577888888888888844432 2 367888999999999999999999999999876 3667889999999
Q ss_pred HHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 90 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 90 ~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++|..+++.+.+++.+++||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988776655544443
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.40 E-value=1.9e-08 Score=93.71 Aligned_cols=126 Identities=13% Similarity=0.108 Sum_probs=94.0
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHhccccchh
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
...+...++..+|+++.|++.||+||| +.+..+..+..+..++....+ +.+.+.+.-++.|++.+...+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345677789999999999999999999 777777777777776666666 777778788888999998899999
Q ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh---chhhhhhHHHHHH
Q 014646 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIF 375 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~---~~~~~~~~~~~~~ 375 (421)
.++.|..|+++|+...++.+.... +|..++..+.-.+ .... .|+..+.+..+..
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~-~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~ 181 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWA-LGILLASLIGYIV-SYYSDNWGWRILLIFGAIPS 181 (451)
T ss_pred cccccccccccccccccccccccc-ccccccccccccc-cccccccccccccccccccc
Confidence 999999999999999999865544 4777766443322 2222 2555555544443
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.37 E-value=0.00011 Score=69.31 Aligned_cols=125 Identities=15% Similarity=0.132 Sum_probs=97.4
Q ss_pred chhhHHHhhhhhc-CchHHHHHHHHHHHHHHhhhcccch-------------------------hHHHHHHHHHhhhhhh
Q 014646 6 VASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD-------------------------FWSIAICRMLVGVGEA 59 (421)
Q Consensus 6 ~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~-------------------------~~~l~~~r~l~G~~~~ 59 (421)
...+.++.++|-| ||-+++.++.++..++.++..++.. ...++...-+..+|.|
T Consensus 88 ~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g 167 (571)
T KOG1237|consen 88 LLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAG 167 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccC
Confidence 3457899999975 9999999999998888655443211 2356667777888999
Q ss_pred hhcccccccccccCC---CC---CchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 60 SFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 60 ~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+.-|...+.-+|-++ ++ ++...+.++....+.|..++..+-.+..++.+|.+.|.+..+..++..++.+..
T Consensus 168 g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 168 GIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred CCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 999999999999998 32 234688899999999999999998888888999999999988766555554443
No 252
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.35 E-value=1.6e-05 Score=71.84 Aligned_cols=154 Identities=18% Similarity=0.049 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHH-hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHH
Q 014646 208 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 286 (421)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
.....-+..+........|+..|+.+..|.++...... .+.-+...+.-++.|.++||..+|+.+.|..++...+..++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 33444556666777788899999999999997555333 44446778888999999999888777777777777666666
Q ss_pred HHHHHHhhc------hhHHHHHHHHHHHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 287 SCLTAFCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 287 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+.+.+..+ ......+...+.+.+......|..++..+..++ ++|.+..+.-..+... |..+...+.+.+.+
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~-g~~l~~~~~~plv~ 174 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL-GGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 655555444 233344455566677777777777777777665 7999999988554444 76666666666666
Q ss_pred hhh
Q 014646 360 HVN 362 (421)
Q Consensus 360 ~~~ 362 (421)
..+
T Consensus 175 ~~g 177 (467)
T COG2211 175 LFG 177 (467)
T ss_pred HhC
Confidence 554
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.34 E-value=5.8e-05 Score=65.13 Aligned_cols=304 Identities=11% Similarity=-0.015 Sum_probs=153.4
Q ss_pred hHHHhhhh-----hcCchHHH------HHHHHHHHHHHhhh------cccchhHHHHHHHHHhhhhhhhhcccccccccc
Q 014646 9 PIFASLAK-----SHNPFRLI------GVGLSVWTFATAGC------GSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 9 ~~~g~l~d-----r~Grr~~l------~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
++|.++.| |+||||.- ++|.++..++...- +-.++...+...-++.-+..+.-..+.-.+.-.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 57889999 99999852 33333333333221 112344444444455666666666666666666
Q ss_pred cCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc-------ccchh---------HHHHHhHHHHHHHHHHHHhcccccc
Q 014646 72 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWR---------YAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 72 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
+..+++.|-+......+.+.|..++..+.-.+.+ ..+|. ...+..+.+.++...+..+...|.
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~- 239 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN- 239 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 7778888877777777777776666554322222 11222 112233333333333333332111
Q ss_pred cccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhhhchhhHHHHHHHHHH
Q 014646 136 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 215 (421)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 215 (421)
+++..+. .+ ...++..+-++++++-|....+......
T Consensus 240 -----~~~~~~e-------------------------~~-------------~~i~~~yk~l~~vLklk~v~~la~i~lt 276 (510)
T KOG3574|consen 240 -----DESVDEE-------------------------LE-------------LGIHESYKLLRDVLKLKSVRWLAGILLT 276 (510)
T ss_pred -----chhhhhh-------------------------hh-------------cCHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 1110000 00 1112223445666777777766666666
Q ss_pred HHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcc--cccch-hhHHHHHHHHHHHHHHHHH
Q 014646 216 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGA--TISNA-FKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~ 292 (421)
.-.++.+-....+.-+.|+ |.+....... .+..++..+..+....|+-. |.... .+.+..=.........+..
T Consensus 277 ~K~gf~a~da~t~LkLle~-Gv~ke~Lal~---~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~ 352 (510)
T KOG3574|consen 277 GKLGFQAADALTSLKLLEH-GVPKEELALI---AVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVW 352 (510)
T ss_pred HHHHhhhhhhccchHHHHc-CCChhHheee---eeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHh
Confidence 6666666666666666664 4443222221 23344444555555444422 21110 0001111111111111111
Q ss_pred hhch------------hHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 293 CLSS------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 293 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
..++ ....+....+.+.+....+....+..++..+|...|+.+.+.|+..+. |+-.=..+..++.|.
T Consensus 353 ~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 353 WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADG 431 (510)
T ss_pred hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhccc
Confidence 1111 111122233444444455556677888888999999999999998888 666555677888876
Q ss_pred h
Q 014646 361 V 361 (421)
Q Consensus 361 ~ 361 (421)
+
T Consensus 432 l 432 (510)
T KOG3574|consen 432 L 432 (510)
T ss_pred C
Confidence 5
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.26 E-value=0.0016 Score=58.73 Aligned_cols=230 Identities=16% Similarity=0.079 Sum_probs=126.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhccc---------ch-----------------------hHHHHHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------FD-----------------------FWSIAICR 51 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r 51 (421)
..+..++.+++.+++.+.+++-.-+..+....+++++. ++ .|...+.-
T Consensus 75 avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Y 154 (509)
T COG3202 75 AVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFY 154 (509)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHH
Confidence 45677888999999999999888877777777776653 11 01111111
Q ss_pred HHhhhhhhhhcc-cccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhccc-c---------hhHHHHHhHHHH
Q 014646 52 MLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-N---------WRYAFWGEAILM 120 (421)
Q Consensus 52 ~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-g---------wr~~f~~~~~~~ 120 (421)
.+.=+-.+.... .-.....|.+..+|-.|..++++.+.+++..++..+..++..+. . -+..+.+.+..+
T Consensus 155 i~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~ 234 (509)
T COG3202 155 IMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILG 234 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 111111122222 23456778888899999999999999999999999888887521 1 233444444433
Q ss_pred HHHHHHHHhcccccccccCCcccccchhhhcccccccccCCCccccccchhhhhhhhhcccccchhhhhhhhhhhhhHhh
Q 014646 121 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 200 (421)
Q Consensus 121 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (421)
++...+..+.-....+......+++.. ++++ .......++++.+
T Consensus 235 ~i~~~l~~~~~r~il~~~~f~~~~~~k-----------------------------k~~~-------k~k~~~~~s~k~i 278 (509)
T COG3202 235 IIAILLYRYINRNVLTDPLFYLRAKKK-----------------------------KKKK-------KLKLGLIESFKMI 278 (509)
T ss_pred HHHHHHHHHHHhhcccCcchhHHHhcc-----------------------------cccc-------cccCcHHHHHHHH
Confidence 333333332211111110000000000 0000 1112334678888
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh-hH---HHHhhHhHH-HHHHHhHHHHHHHhhccc
Q 014646 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM---MFGGVTIVC-GIVGTISGGFILDQMGAT 269 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~g~l~d~~~~~ 269 (421)
.++|.++.+.+...+++.+.+.+..---.-.++.+..... .. .+....++. .++....++.+.+|.|-.
T Consensus 279 ~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 279 LRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 9999999988888888877766654332223332322211 11 122233333 344556777788887764
No 255
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.26 E-value=4.8e-05 Score=65.49 Aligned_cols=143 Identities=15% Similarity=0.096 Sum_probs=109.5
Q ss_pred HhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 014646 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+..+.+.... .++.++.++..+.+++..++.+|+|.+ +.+..+.++..+...+=... +.+..+....+.+.+.
T Consensus 40 ~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-----r~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gI 113 (395)
T COG2807 40 QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-----RSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGI 113 (395)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-----HHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhH
Confidence 3455664444 667888888889999999999999988 66666665555555443333 5566677778888888
Q ss_pred hccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhh
Q 014646 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+..+...+..+.+.+ |++.+..+|++....+. ++.+++.+...+.++.++|+....+.+...+++.+.++
T Consensus 114 av~nVLLPslIK~~F-pk~~~~mtglYs~sl~~-~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 114 AVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGA-GAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHH-HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888887 46678999999888877 77888888888888877798888888888777777665
No 256
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.25 E-value=5.8e-06 Score=68.28 Aligned_cols=120 Identities=15% Similarity=0.114 Sum_probs=85.4
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHH-HHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTF-ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
++.+++.|.++||+|++-..+.+..+..+ +-....| +++.=++...+.|++.+.........++...|+++.|++.+
T Consensus 314 av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTayg 391 (459)
T KOG4686|consen 314 AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYG 391 (459)
T ss_pred hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHH
Confidence 56789999999999999887666554443 3333333 23333456677888877666556677888889999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHhhcccc---hhHHHHH-hHHHHHHHHHH
Q 014646 84 MFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWG-EAILMLPFAVL 126 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~g---wr~~f~~-~~~~~~~~~~~ 126 (421)
..+...++|..+.|++++.+.++-| |--.|++ .+.+++....+
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997544 5444444 44444433333
No 257
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.24 E-value=3.2e-05 Score=64.47 Aligned_cols=123 Identities=11% Similarity=0.124 Sum_probs=73.8
Q ss_pred HHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh---
Q 014646 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--- 294 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (421)
..+.+..|.|. +++..+.++.+. .+.....++..+ .+..|.+.|++|.+ ..+.++..............
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 35566666665 456788887665 444555666665 58889999999987 66666665555554433321
Q ss_pred ----chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCC
Q 014646 295 ----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 295 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
.+.|......++.+.+.............+.+| ++||++.|+.-...+.-+++.
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~ 147 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIF 147 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHH
Confidence 122333333333333333333444455556775 689999999977777634333
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.23 E-value=4.8e-06 Score=63.78 Aligned_cols=99 Identities=10% Similarity=0.156 Sum_probs=86.1
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-++.|++.+..++..-.++.+..++++|++..+
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ 128 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTG 128 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHH
Confidence 46778889999999999999999999998655443 56778899999999999999999999999999999999999999
Q ss_pred HHHhHHHHHhHHHHHHHHHh
Q 014646 84 MFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l 103 (421)
++......+.++|.++.-.+
T Consensus 129 ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 129 IFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99888888888887765544
No 259
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.12 E-value=2.6e-06 Score=75.19 Aligned_cols=132 Identities=11% Similarity=-0.034 Sum_probs=100.2
Q ss_pred cccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchh----HHHHHHHHHhhh-hhhhhcccccccccccCCCCC
Q 014646 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF----WSIAICRMLVGV-GEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++.-|-.+...+.|+.|||++.+.|.+++++..+..+...|- ..+++.-.+..+ +.-+.......+-+|.+|.+-
T Consensus 360 ~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv 439 (538)
T KOG0252|consen 360 STVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV 439 (538)
T ss_pred ccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH
Confidence 344566777889999999999999999999999998888761 112222222222 222233445667799999999
Q ss_pred chhHHHHHHhHHHHHhHHHHHHHHHhhc-----ccchhHHHHHhHHHHHHHHHHHHhcccccc
Q 014646 78 KTAWLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
|+...|+..+..-.|.++|.....++.+ ..+-|+.|++.+.+.++..+..+++ ||+.
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk 501 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETK 501 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccc
Confidence 9999999999999999999999999988 7789999999998877665555544 6654
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.10 E-value=0.00038 Score=63.76 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=37.5
Q ss_pred hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCch
Q 014646 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.+..++...+.++..|-..+....+..+.+++++|..+..+.+.+... |-.+|.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~-Gl~~Gs 425 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV-GLALGA 425 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4555666677777777766666677777888888888888777554444 655555
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.04 E-value=8.1e-05 Score=67.61 Aligned_cols=136 Identities=11% Similarity=0.079 Sum_probs=77.0
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH---hhc--hhHHHHHHHHHHHHHHhccccc
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLS--SLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
...+...++..+++++.|++..|.+.-+ +.++.+.+++.+..++.. ..+ ..+..++.-.+.|++. .....
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~ 149 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAV 149 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHH
Confidence 3345677888999999999999988521 445555555555444432 122 2333333333443332 33445
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh------------hhhchhhhhhHHHHHHHHHHHHhhh
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
.-.++++..-+++|.++++..+. ...+|.++||.+...+.. .++.|..+-++.++..+...++...
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~-~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSG-GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhh-HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 57777776667888888888744 333466666654433321 1124555666666665555555443
No 262
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.94 E-value=0.00017 Score=63.53 Aligned_cols=111 Identities=16% Similarity=0.054 Sum_probs=71.8
Q ss_pred hhHhHHHHHHHhHHHHHHHhhc-----ccccchhhHHHHHHHHHHHHHHH-----HHhhc-------hhH----HHHHHH
Q 014646 246 GVTIVCGIVGTISGGFILDQMG-----ATISNAFKLLSAATFLGAISCLT-----AFCLS-------SLY----GFLALF 304 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-------~~~----~~~~~~ 304 (421)
.+..+.+ +.+...|+.+|+.+ ||.+ .+............. ..... +.+ .....+
T Consensus 22 al~~~~a-p~R~~~G~~SD~~~s~~G~rRtP----yI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F 96 (403)
T PF03209_consen 22 ALHYLVA-PLRVWFGHRSDTHPSILGWRRTP----YIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAF 96 (403)
T ss_pred HHHHHHH-HHHHHhccccccCcccCcCCchh----hhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHH
Confidence 3344333 46888999999988 6643 222222222221111 11111 222 223445
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 362 (421)
.+.|.+......+..++..|..|+++|+++.++...+.- +|.+++..+.|.+.|.+.
T Consensus 97 ~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli-~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 97 LLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLI-VGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred HHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHH-HHHHHHHHHHHHHccccC
Confidence 556677777788889999999999999999999965554 499999999999988654
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.86 E-value=0.00042 Score=66.70 Aligned_cols=159 Identities=12% Similarity=-0.010 Sum_probs=97.9
Q ss_pred HHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhh-cccccchhhHHHHHHHHHHHHHHHHHhhc--
Q 014646 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAATFLGAISCLTAFCLS-- 295 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (421)
++++...+..|+.+..+.+...+ ..........-+..+++|+++|++ |++ +.+....++..++..++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence 44555666667777777765433 222223333345577889999975 665 555555555444444333221
Q ss_pred ------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcc---hhHHHHHHHHHHHHHhccCCchhHHHHhhhhhh----
Q 014646 296 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---- 362 (421)
Q Consensus 296 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~---- 362 (421)
.....+..+.+...+.+..-+...+...+.++++ .+.+...+.....+. |+.+++.+.+++.+..+
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~ 156 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGC 156 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Confidence 1123445666677777777788888888877653 466677777667777 88888888888875542
Q ss_pred --chhhhhhHHHHHHHHHHHHhhh
Q 014646 363 --NWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 363 --~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
+|..+|.+.+++++++.+++..
T Consensus 157 ~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 157 QDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666655543
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.85 E-value=0.00097 Score=57.96 Aligned_cols=144 Identities=15% Similarity=0.041 Sum_probs=86.2
Q ss_pred HhhccchhhHH-HHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 014646 233 NIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 233 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+.++.++.+.. +.....+.+.+...+.|.+.||+||| +.++...++..+.++.-. .++.+..++.=++.|...
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence 45777765553 33445566777888889999999999 888777777777775433 455666666666777776
Q ss_pred hccccchhhh-hhcc----cCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhc-hhhhhhHHHHHHHHHHHHh
Q 014646 312 FATQAPVNYV-CLHS----VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 382 (421)
...+...-++ +.|. +|++..+...+......+.+-++.+..+..++.|..+. ...+|.....+.+++.++.
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 6666555333 3332 44455555555443233332334445455566665542 3456666666555554443
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.71 E-value=0.00091 Score=61.51 Aligned_cols=121 Identities=15% Similarity=0.072 Sum_probs=80.9
Q ss_pred hHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCc
Q 014646 249 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 249 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
++..++.+...|.++|++||| ..+......+.+......+.. +| ..+...+ ..+.........+++++....
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~~~l~~~~~~~~~-~~-~~~~~~l-~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK-----VVLLLPLFGTILPALCLLFQG-YW-FFLLLGL-SGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHHHHHhHHHHHHHH-HH-Hhhhccc-ccchhhhhhhhhhheeeccch
Confidence 566778888999999999998 555555544444444333333 22 2222222 223335566678889999988
Q ss_pred chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
+.|....|+.+...+. +..++|.+.+.+.+..+ +...+.+..+..+...
T Consensus 144 ~~R~~~~gll~~~~~~-~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~~ 192 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGA-GLVIGPALGGYLVKFLG-IALVFLIAAASGILSL 192 (463)
T ss_pred hHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHHH
Confidence 9999999999877777 77889999999988855 5455555555444433
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.69 E-value=0.0011 Score=54.74 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=36.9
Q ss_pred CCchhHHHHHHhHHHHHhHHHHHHHHHh---h--cccchhHHHHHhHHHHHHHHHHHHhc
Q 014646 76 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~ 130 (421)
|+|+....+...+.++|.++.-...-.- . -.-+|++++.+.+++.++..++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5577777777788888887755432221 1 12259999999998877766666555
No 267
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.61 E-value=0.00046 Score=57.95 Aligned_cols=120 Identities=8% Similarity=-0.117 Sum_probs=78.3
Q ss_pred hHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhH
Q 014646 9 PIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 88 (421)
Q Consensus 9 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 88 (421)
+....+.||+---.=+.+..++.+.+.++.+++++.++=+.+-.+..++.|.....-.++- ..+++ ...+.++.+
T Consensus 80 l~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~~----~~i~~WSSG 154 (409)
T KOG3880|consen 80 LTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SRYPS----IVIAGWSSG 154 (409)
T ss_pred HhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-ccCCC----ceeccccCC
Confidence 4445567776433334555667788889999999999988888888888886554443333 33333 345566666
Q ss_pred HHHHhHHHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhcccc
Q 014646 89 IPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 89 ~~~G~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
.+.+.++|..--..+.+ ..+-|...++...+.++.+...++.+++
T Consensus 155 TGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 155 TGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 66666666654444444 3457888888877777777777776643
No 268
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.48 E-value=0.0081 Score=53.85 Aligned_cols=152 Identities=10% Similarity=-0.064 Sum_probs=90.1
Q ss_pred HHhhhHHHHh-hccchhhHHHHhhH--hHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHH
Q 014646 225 YWGPKAGYNI-YHMSNADMMFGGVT--IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 301 (421)
Q Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
.|+..|+.+. .+.+..+..--..+ .=..++..+....+.|.++.| ..++...+...+...++.+.++....-
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~mq 98 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAMQ 98 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHHH
Confidence 4566677766 67775443211111 122344566777899999988 777777777677667777777777666
Q ss_pred HHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhhh-hhchhhhhhHHHHHHHHHHH
Q 014646 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-VNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~ 380 (421)
+.-+..|..... -...++++-..+++++--++.+..... ..+|..++..++..+... ..+|.....+......++.+
T Consensus 99 ~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa-~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 99 LMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAA-TLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 666666555543 444567777788888777888777543 333766666555544442 12343443444333334444
Q ss_pred Hhh
Q 014646 381 IWF 383 (421)
Q Consensus 381 ~~~ 383 (421)
..+
T Consensus 177 ~~~ 179 (412)
T PF01770_consen 177 IAL 179 (412)
T ss_pred HHH
Confidence 333
No 269
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.0022 Score=57.21 Aligned_cols=121 Identities=19% Similarity=0.213 Sum_probs=67.1
Q ss_pred HHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh--c---hhHHHHHHH
Q 014646 230 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S---SLYGFLALF 304 (421)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~ 304 (421)
+.++.++.+....++..++.+.+++..+.+.|+.||+|-| ..........++...+=... + +.... .+.
T Consensus 70 ~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~-~l~ 143 (480)
T KOG2563|consen 70 YVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFRR-PLT 143 (480)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccchh-hhh
Confidence 4555566444445667888899999999999999999998 66555555555544332211 1 11111 122
Q ss_pred HHHHHHHhccccch----hhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 305 TVGELLVFATQAPV----NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 305 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
..+....+..++-. .-+...-+++++|+++..+..+...+ |.+++..+-+.+
T Consensus 144 ~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~L-Gvavg~llppil 199 (480)
T KOG2563|consen 144 HTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPL-GVAVGFLLPPIL 199 (480)
T ss_pred HHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchH-HHHHHhhcccee
Confidence 22222222222211 22334457889999999988444333 544444333333
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.37 E-value=0.0024 Score=42.47 Aligned_cols=59 Identities=15% Similarity=0.221 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhccc
Q 014646 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
-..+++.......+.-|+|.|+++ .|.++.+. .+..+..+..+++.++.|.++||.+++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 344566677778888899999987 66776555 455777788999999999999999998
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.31 E-value=0.017 Score=44.47 Aligned_cols=101 Identities=6% Similarity=-0.090 Sum_probs=74.3
Q ss_pred hhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcc
Q 014646 246 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 325 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (421)
.+......++.++.+.+.+++|.| +.++++.+...+..... ..++.+..+....+.|++.+..+.....++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 445566677788889999999998 77766666555444433 345667777788889999999998888888888
Q ss_pred cCcchhHHHHHHHHHHHHHhccCCchhH
Q 014646 326 VKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
..++.+++-.++.....+. +.++|..+
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~~ 144 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNLF 144 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHHH
Confidence 7778899988888655554 65555543
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.28 E-value=0.0035 Score=57.79 Aligned_cols=150 Identities=14% Similarity=0.005 Sum_probs=84.7
Q ss_pred hhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc----hhHHHHH
Q 014646 228 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS----SLYGFLA 302 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 302 (421)
..++++.++.++.+. .+..+..+.- ...++.|.++|-+.-...+++..++.+.+++....+.+...+ +.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 346778888886544 2223322222 346788999998752211222445555555543333332222 3334444
Q ss_pred HHHHHHHHHhccccchhhhhhcccCc--chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHH
Q 014646 303 LFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 380 (421)
++.+..++........-..+.|.... +.++.-.+....... +|++++..+.|.+.+..+ ++..|.+.+.+..+..+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~-~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRS-VGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHH-HHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHHHH
Confidence 44555555555555556666665533 237777777754444 488889989999998865 55667666555444443
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.00 E-value=0.083 Score=48.29 Aligned_cols=172 Identities=14% Similarity=0.039 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchh-hHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHH--HHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS--AATF 282 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~--~~~~ 282 (421)
.+.+....++..+..-...+-.|.++.+.+..+-. ...+.....+..++.+...|.+.||..|.+..+..+.. ....
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 34455666777777777777888888888655522 22444555566677778888999998876322111111 1222
Q ss_pred HHHHHHHHHHhhch-----hHHHHHHHH---HHHHHHhcccc-----chhhhhhccc--CcchhHHHHHHHHHHHHHhcc
Q 014646 283 LGAISCLTAFCLSS-----LYGFLALFT---VGELLVFATQA-----PVNYVCLHSV--KPSLRALSMAISTVSIHIFGD 347 (421)
Q Consensus 283 ~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~g~ 347 (421)
+++..+........ .+....++. +.+........ .--.++.... +++...+.++... -...+..
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mR-RIDL~ck 162 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMR-RIDLFCK 162 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHH-HHHHHHH
Confidence 22222222222111 122221111 11111111111 1111111122 2344555555552 3344577
Q ss_pred CCchhHHHHhhhhhhchhhhhhHHHHHHHHHH
Q 014646 348 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 348 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 379 (421)
+++|.+.|.+.+..+ ......+.++..++..
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~ 193 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASV 193 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHH
Confidence 899999999998765 4444444444444444
No 274
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.94 E-value=0.00012 Score=69.03 Aligned_cols=133 Identities=11% Similarity=0.015 Sum_probs=1.3
Q ss_pred HHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc---
Q 014646 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--- 295 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 295 (421)
.+++..-.-.-+++.++.+..+. .+.+..-++.++..++..++.+|..|. +++..+.++.++..++....+
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHHhccHhhc
Confidence 33333333334667788876555 444666788888888878887775544 555444444444433322100
Q ss_pred -------------------------------------------h----hHHHHHHHHHHHHHHhccccchhhhhhcccCc
Q 014646 296 -------------------------------------------S----LYGFLALFTVGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 296 -------------------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
. ...+++..++.|++....++...+++-|.+++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 0 11122233334444444555556777777877
Q ss_pred chhHHHHHHHHHHHHHhccCCchhHHHHhh
Q 014646 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
+..+...|+.. ....+|-++|-.+++...
T Consensus 173 ~~splYiGi~~-~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 173 KNSPLYIGILY-AMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ------------------------------
T ss_pred ccCccchhhhh-HHhhccHHHHHHHHHHHH
Confidence 78788888874 444446555554545443
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0076 Score=53.98 Aligned_cols=149 Identities=10% Similarity=-0.012 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHH
Q 014646 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
........+...++...-..|.|.|+++.+-............-+.+++..++.|..+||...|..++|..+....+...
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 33334444555666666778899999885544332223333344566777888999999765554444455555444444
Q ss_pred HHHHHHHhhc-----------------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHH-HHHHHHHHHHHhcc
Q 014646 286 ISCLTAFCLS-----------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGD 347 (421)
Q Consensus 286 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~ 347 (421)
+.+.++.+.. .....++.+.+.-+.......+.-++..|...++++.+ +++....+... |+
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-Gn 192 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GN 192 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cc
Confidence 4443333221 11223334444555666788899999999988876666 88888555555 87
Q ss_pred CCchhHHH
Q 014646 348 VPSSPLVG 355 (421)
Q Consensus 348 ~~~~~~~g 355 (421)
.+|-.+.+
T Consensus 193 vLGY~~g~ 200 (498)
T KOG0637|consen 193 VLGYALGS 200 (498)
T ss_pred eeeeeccc
Confidence 87764444
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.75 E-value=0.093 Score=48.59 Aligned_cols=56 Identities=7% Similarity=-0.051 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhcccc-chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhh
Q 014646 302 ALFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
.+............+ ..+..++|...+++..+-.++.....+. |.++++.+..++.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 344444444444444 5577788888888999999999666666 8888887777766
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.73 E-value=0.11 Score=46.46 Aligned_cols=61 Identities=18% Similarity=0.032 Sum_probs=37.6
Q ss_pred chhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHh
Q 014646 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+.+..+....+.++..|-..+....+..+.++++++..+-.+...+ -..|-..|. +.+++
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~f-l~~Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFF-LVGGLALGS-LLSWV 401 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHH-HHHHHHHhh-HHHHH
Confidence 45566666777777776666666677777888887777666666333 333555544 33443
No 278
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.51 E-value=0.077 Score=46.23 Aligned_cols=133 Identities=17% Similarity=0.053 Sum_probs=76.9
Q ss_pred HHHHhhhHHHHhhccch--hhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhch--hH
Q 014646 223 YSYWGPKAGYNIYHMSN--ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS--LY 298 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 298 (421)
.....+.+..+...... ..........+...++.+..|.+.||.||| +.............+......+ .+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHH
Confidence 33444545444333221 223344555666677779999999999887 4443333222222222222222 44
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhh
Q 014646 299 GFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
.........+.+.+...+....+..+..|+ +.|+...+.........+..++|.+.+.+.+.
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445666666677778888888876 67888888875533444777777666666654
No 279
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.44 E-value=0.00073 Score=59.23 Aligned_cols=55 Identities=18% Similarity=0.061 Sum_probs=2.8
Q ss_pred hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCch
Q 014646 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.+..++...+.++..|-..+....+..+.+++++|..+..+.+.+... |-.+|.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs 301 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS 301 (309)
T ss_dssp --------------------HHHH--------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4455566666677776666666677777888887887777776444444 655555
No 280
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.23 E-value=0.059 Score=36.31 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhc
Q 014646 217 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (421)
..+-+.+...+|...++ .+.+..+. .+.+...++..+|.+...++.++..++ +.+..+.+........+...+
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHh
Confidence 34455666677776555 66775444 666888899999999999988876555 666677777777766666666
Q ss_pred hhHHH
Q 014646 296 SLYGF 300 (421)
Q Consensus 296 ~~~~~ 300 (421)
+.+.+
T Consensus 79 ~~~~w 83 (85)
T PF06779_consen 79 SFWLW 83 (85)
T ss_pred chHHH
Confidence 55443
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.09 E-value=0.024 Score=49.43 Aligned_cols=118 Identities=12% Similarity=0.026 Sum_probs=64.7
Q ss_pred cchhhHHHhhhhhcCchHHHHHHHHHHHHHH------hhhcccc------hhHHHHHHHH----Hhhhhhhhhccccccc
Q 014646 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFAT------AGCGSSF------DFWSIAICRM----LVGVGEASFISLAAPF 68 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~------~~~~~~~------~~~~l~~~r~----l~G~~~~~~~~~~~~~ 68 (421)
++..++.|...|+..|+|++...+.+.-++. +...+.. ++..+..+-+ +..++.=.........
T Consensus 77 lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i 156 (503)
T KOG2601|consen 77 LVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILI 156 (503)
T ss_pred HhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 4556778899999999999887665433222 2222322 3333333222 2223222222223333
Q ss_pred ccccC----CCCCchhH---HHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHH
Q 014646 69 IDDNA----PVPQKTAW---LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 122 (421)
Q Consensus 69 i~~~~----~~~~r~~~---~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 122 (421)
-.||. ..+.+... .+..-..-..-..+.|.+.|.+.+..+-|..-...++-+++
T Consensus 157 ~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 157 ERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred cccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 34553 23334333 35555555566788999999999888877755555444444
No 282
>PRK03612 spermidine synthase; Provisional
Probab=95.83 E-value=0.71 Score=43.79 Aligned_cols=56 Identities=9% Similarity=-0.043 Sum_probs=30.1
Q ss_pred HHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh-hhh
Q 014646 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVN 362 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~~ 362 (421)
++.+++.++..|....+..+.. .+..+...|-.+ ..+.+|+++|+++.+++.- ..|
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly-~~ntlGa~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVL-AADYLGALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhH-hHHhHHHHHHHHHHHHHHHHhcc
Confidence 3445566666555444443322 222344455553 4455588888888777654 455
No 283
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.64 E-value=0.054 Score=52.20 Aligned_cols=156 Identities=13% Similarity=0.018 Sum_probs=80.6
Q ss_pred HHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhh------
Q 014646 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------ 294 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 294 (421)
++..-.-.-.++.++.+.... .+....-++..+......+...|..|. +++....++.++..++....
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~Ig~G~~~m~lgsll~alPHf~~~~ 188 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RWIGIGLVLMGLGSLLFALPHFFSGP 188 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ceeeechhHHHHHHHHHhChHHhcCc
Confidence 333333334566777765444 334555677777777777777777665 44444444433333322210
Q ss_pred ------------------------------------------chhHHHHHHHH----HHHHHHhccccchhhhhhcccCc
Q 014646 295 ------------------------------------------SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 295 ------------------------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
.+....+++++ +.|.+....++...+++-|.+.+
T Consensus 189 y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~ 268 (735)
T KOG3626|consen 189 YEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKK 268 (735)
T ss_pred chhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccc
Confidence 00011222333 33444444555556667777777
Q ss_pred chhHHHHHHHHHHHHHhccCCchhHHHHhhhhh------------------hchhhhhhHHHHHHHHHHHHhh
Q 014646 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV------------------NNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++-+...|+.+ .+..+|=++|-.+++...... |.|...|++.+.+.+...+.++
T Consensus 269 ~~SplYlgi~~-~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f 340 (735)
T KOG3626|consen 269 KNSPLYLGILY-SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF 340 (735)
T ss_pred cCCcHHHHHHH-HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888874 445545555444444443221 3444555556555555555444
No 284
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.45 E-value=0.58 Score=42.02 Aligned_cols=36 Identities=11% Similarity=-0.043 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHH
Q 014646 299 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSM 335 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (421)
..++...+.+.+.+...+..+..... +|+++....+
T Consensus 119 vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm 154 (406)
T KOG1479|consen 119 VTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM 154 (406)
T ss_pred HHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH
Confidence 33445555666666666666665444 6777544333
No 285
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.36 E-value=0.83 Score=42.73 Aligned_cols=41 Identities=10% Similarity=-0.044 Sum_probs=30.0
Q ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHHHHhhh
Q 014646 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+..+.+....++..+-.++.....+. |.+++..+..++.+
T Consensus 165 FW~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 165 FWGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 466677777778999999999766666 77766666666655
No 286
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.27 E-value=0.017 Score=38.87 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=43.0
Q ss_pred ccccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHH
Q 014646 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 48 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 48 (421)
+||.+|++...++.++..+++.+..+.+...+..+.+++.++.+.+.
T Consensus 38 ~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 38 LGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 68999999999999998999999999999999999999999887653
No 287
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.26 E-value=0.1 Score=47.80 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=76.0
Q ss_pred cccchhhHHHhhhh---hcCchHHHHHHHHHHHHHHhhhccc------------------chhHHHHHHHHHhhhhhhhh
Q 014646 3 GLLVASPIFASLAK---SHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAICRMLVGVGEASF 61 (421)
Q Consensus 3 g~~~~~~~~g~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~ 61 (421)
|..+++.+.+.+.+ ++||++.+.++..+..++.++.-.+ +++...++.-+++|++.+..
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~ 370 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACF 370 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHH
Confidence 34455666666665 5899999999998888888775543 34667788889999999999
Q ss_pred cccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHH
Q 014646 62 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 102 (421)
Q Consensus 62 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 102 (421)
....+.++.+.+ +++|..+.++...-..++..++-.....
T Consensus 371 ~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 371 NTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999 5568888888887777777665554443
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.12 E-value=0.11 Score=47.01 Aligned_cols=87 Identities=15% Similarity=0.045 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHhccccchhhhhhcccCcc---hhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHH
Q 014646 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 374 (421)
..+.+.+.+...+.++.=+.......|.++++ .|.+.........+. |..+++...+++.++.+ |...|.+..+.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 45677777788888888888899999988775 566666677677777 88888888899998876 87888888888
Q ss_pred HHHHHHHhhhhe
Q 014646 375 FFLAAGIWFVGI 386 (421)
Q Consensus 375 ~~~~~~~~~~~~ 386 (421)
.+++.+.++..+
T Consensus 112 ~~~~~~~f~~~~ 123 (372)
T PF00854_consen 112 MLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHHhCC
Confidence 877777666543
No 289
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.91 E-value=0.84 Score=41.27 Aligned_cols=73 Identities=11% Similarity=-0.003 Sum_probs=42.3
Q ss_pred HHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhhcccCc
Q 014646 250 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
+..++..+++.++.+|+.-+ .-......+....+++....++.+.-++..++.++..+..-.....+ ...+++
T Consensus 70 ~P~l~~Kl~aP~fi~~v~y~-----~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~ 142 (402)
T PF02487_consen 70 LPSLLVKLIAPFFIHRVPYW-----IRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK 142 (402)
T ss_pred HHHHHHHHHhHhhhhhccch-----HHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc
Confidence 45566677788888887654 22333344444455555555677766777777766666555444444 334443
No 290
>PRK03612 spermidine synthase; Provisional
Probab=94.89 E-value=0.12 Score=48.89 Aligned_cols=77 Identities=13% Similarity=-0.032 Sum_probs=50.8
Q ss_pred HHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhh-cccchhHHHHHhHHHHHHHHH
Q 014646 48 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAV 125 (421)
Q Consensus 48 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~ 125 (421)
+..-++.++..|+..|....+..+... ++-++..|..+....+|.++|.++.+++. ..+|-....++.+.+.+..++
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 334556677888888777666654322 23567788889999999999999887765 466655445455554444443
No 291
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.02 E-value=0.054 Score=36.02 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=23.2
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHH
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVW 31 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 31 (421)
..++++++|.++||+++++.++....+.
T Consensus 48 ~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 48 RFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3578999999999999999887776554
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=93.14 E-value=0.81 Score=42.19 Aligned_cols=37 Identities=19% Similarity=0.119 Sum_probs=21.8
Q ss_pred chhhhhhcccCcchhHHHHHHHHHHHHHhccCCchhHH
Q 014646 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 354 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 354 (421)
..-.+......+++++-|+.......+. |.+++-.++
T Consensus 138 AVDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvF 174 (544)
T PF13000_consen 138 AVDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVF 174 (544)
T ss_pred eeehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHH
Confidence 3445556667778777777766444343 666654443
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.10 E-value=10 Score=33.29 Aligned_cols=70 Identities=6% Similarity=0.101 Sum_probs=56.3
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCC
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
.+..+++.+.+..++|-|+++.++...+... +..=+=+.+..++-.-...|++.+..+..--+|+++.-.
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3456777888999999999999988887653 333345788899999999999999999988888887654
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=90.83 E-value=2.9 Score=37.29 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccch-hhHHHHhhHhHHHHHHHhHHHHHHH-----hhcccccchhhHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILD-----QMGATISNAFKLL 277 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~~~~ 277 (421)
+.+..+.+.+..++....... -+|.+++. .+.+- ....+....+-- .--++...++| |+|||+. .+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrks----Wv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKS----WV 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccc----ee
Confidence 445555555566655554444 78888873 34442 222222221111 11345555666 8998843 23
Q ss_pred HHHHH-HHHHHHHHHHhhc----------hhHHHHHHHHHHHHHHhccccchhhhhhcccCcchhHHHHHHHHHHHHHhc
Q 014646 278 SAATF-LGAISCLTAFCLS----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 346 (421)
Q Consensus 278 ~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 346 (421)
+-+.. ++..+.++....+ +.......+++..+..+.--...-.+......+++.|-++.......+. |
T Consensus 103 vp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~-G 181 (510)
T KOG3574|consen 103 VPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTA-G 181 (510)
T ss_pred eehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhh-h
Confidence 32332 3333333322211 1112222333344444433334455666667777767666665333333 5
Q ss_pred cCCch
Q 014646 347 DVPSS 351 (421)
Q Consensus 347 ~~~~~ 351 (421)
.+++.
T Consensus 182 yfL~~ 186 (510)
T KOG3574|consen 182 YFLGN 186 (510)
T ss_pred HHhhc
Confidence 55543
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=89.15 E-value=14 Score=35.76 Aligned_cols=167 Identities=11% Similarity=-0.004 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhccchhhH-HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHH
Q 014646 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (421)
.+-...+++....+-.|+.+..+.+...+ -.............+.+++++|-+--|. +.+.++.++...+..++.
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 34444555555666667777766664222 2222333344556678899999864442 444444444333322221
Q ss_pred hhc----------------------h---hHHHHHHHHHHHHHHhccccchhhhhhcccCc----chhH--HHHHHHHHH
Q 014646 293 CLS----------------------S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKP----SLRA--LSMAISTVS 341 (421)
Q Consensus 293 ~~~----------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~g~~~~~ 341 (421)
... + ...+...+.+...+.++.-+...+.-.|-+++ +.+. .-+......
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 100 0 01222233333345556667777777777772 2222 444444344
Q ss_pred HHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHhhhhe
Q 014646 342 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 342 ~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
.+. |..++..+.-++.|..+ |...+........++.++++...
T Consensus 203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHcCc
Confidence 444 66666666666666654 87888888777777776665543
No 296
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.51 E-value=10 Score=35.26 Aligned_cols=31 Identities=6% Similarity=-0.144 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhccccchhhhhhcccCcch
Q 014646 299 GFLALFTVGELLVFATQAPVNYVCLHSVKPSL 330 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
..++..++.+++.+...+....+.. .+|++.
T Consensus 108 ~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~ 138 (437)
T TIGR00939 108 TTMASVVIINSGMALLQGSLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHhhhhhhcccchhhcc-cCCHHH
Confidence 3444555566666666666666554 466654
No 297
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=82.72 E-value=10 Score=34.52 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=10.9
Q ss_pred HHHHHHHhHHHHHHHhhcc
Q 014646 250 VCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~ 268 (421)
+..++..+..|++..|.+-
T Consensus 6 i~~i~~ii~~G~~~~~~~~ 24 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFGI 24 (385)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 3344455566777776643
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=81.31 E-value=0.95 Score=38.08 Aligned_cols=69 Identities=10% Similarity=0.084 Sum_probs=35.1
Q ss_pred HHHHHhHHHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHhccccch-hhhhhccc
Q 014646 252 GIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV-NYVCLHSV 326 (421)
Q Consensus 252 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 326 (421)
.++...+.|-++||.||| +..+...+...++++-= ..+..-..++.=.+.|......++.. .+++.|..
T Consensus 85 smLFGtivgSLaDkqGRK-----racvtycitYiLsCiTK-hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRK-----RACVTYCITYILSCITK-HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhhhccc-----cceeeehHHHHHHHHhh-cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 355566678899999998 44433333333333321 12222333444455555555444444 44555544
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.80 E-value=3.8 Score=35.42 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=61.4
Q ss_pred HHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHh
Q 014646 29 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
+++.+...+..+.++++..++.-+.-|+-.|..+....--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 444555566678899999999999999988888877777788878888999999999999999998888776554
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.36 E-value=4.9 Score=28.15 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=23.4
Q ss_pred chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhch
Q 014646 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 364 (421)
+.++.+.++- .....+++++-....||+.|++-+.
T Consensus 38 s~k~~~~a~k-lssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 38 SIKGYAQAFK-LSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4667777776 4555556565566889999987544
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=79.62 E-value=9.3 Score=31.28 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=23.4
Q ss_pred ccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhH
Q 014646 71 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 111 (421)
Q Consensus 71 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~ 111 (421)
|+..++++.+.-.......-++..+|..+++.+.+..+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 33333434334445555556666777777777777666433
No 302
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=78.92 E-value=51 Score=30.01 Aligned_cols=20 Identities=20% Similarity=0.363 Sum_probs=12.5
Q ss_pred hhhHhhhchhhHHHHHHHHH
Q 014646 195 QDTKVLLQEKVYVVNVLGYI 214 (421)
Q Consensus 195 ~~~~~l~~~~~~~~~~~~~~ 214 (421)
+..++.+++|..+...++..
T Consensus 236 ~~~~~~~~nP~~~a~~lgli 255 (385)
T PF03547_consen 236 KSILKLFKNPPLIAIILGLI 255 (385)
T ss_pred HHHHHHHhCcHHHHHHHHHH
Confidence 34456677787776666543
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=76.48 E-value=49 Score=31.71 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=14.3
Q ss_pred hhHhHHHHHHHhHHHHHHHhhccc
Q 014646 246 GVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
.+..+.+.+++..++++...++.+
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCC
Confidence 334455566666666666666654
No 304
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=75.43 E-value=49 Score=28.01 Aligned_cols=21 Identities=5% Similarity=-0.205 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHhhhHHHHhh
Q 014646 215 AYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (421)
......++..+.=..|.+++.
T Consensus 189 v~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 189 VFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHhcccchHHHHHhCc
Confidence 334445555554445666654
No 305
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=70.11 E-value=66 Score=27.12 Aligned_cols=20 Identities=15% Similarity=0.524 Sum_probs=12.0
Q ss_pred HHHHHHHhHHHHHHHhhccc
Q 014646 250 VCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~~ 269 (421)
+|..+..+.+-+++.|+..|
T Consensus 251 lCT~lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVR 270 (294)
T ss_pred HHHHHHHhhhHHHhhhheeE
Confidence 44444444555677788776
No 306
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=67.80 E-value=21 Score=30.26 Aligned_cols=88 Identities=10% Similarity=0.038 Sum_probs=45.3
Q ss_pred cccchhhHHHhhhh-hcCchHHHH----HHHHHHHHHHhhhc-cc----chhHHHHHHHHHhhhhhhhhccccccccccc
Q 014646 3 GLLVASPIFASLAK-SHNPFRLIG----VGLSVWTFATAGCG-SS----FDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~~~~~~~g~l~d-r~Grr~~l~----~~~~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
|+.+|....|+... ++-||+.+. .+++.+.++.++.. .. .++..+++.-++.|+..=+..++...+=.|+
T Consensus 153 g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy 232 (267)
T PF07672_consen 153 GYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEY 232 (267)
T ss_pred HHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Confidence 45556666666664 355666544 33445555444421 11 1466678888888876544554443333333
Q ss_pred --CCCCCchhHHHHHHhHHHHHh
Q 014646 73 --APVPQKTAWLSMFYMCIPTGV 93 (421)
Q Consensus 73 --~~~~~r~~~~~~~~~~~~~G~ 93 (421)
.+|++-|..+| ..+++|.
T Consensus 233 K~~~pk~ig~~Fg---~iWGfGY 252 (267)
T PF07672_consen 233 KGYNPKKIGIQFG---LIWGFGY 252 (267)
T ss_pred cCCCcceehhHHH---HHHHHHH
Confidence 33444444444 4444443
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=67.04 E-value=1.1e+02 Score=28.72 Aligned_cols=75 Identities=8% Similarity=-0.058 Sum_probs=40.6
Q ss_pred HHHHHhccccchhhhhhcccCc-chhHHHHHHHHHHHHHhccCCchhHHHHhhhhhhchhhhhhHHHHHHHHHHHHh
Q 014646 307 GELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+.+....-.+.-.-+.+.+|. +.++..+|-.+...+.+..++.-..++-+....| |-....+...+.++..+++
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~litg~lF 369 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLITGVLF 369 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Confidence 4444444444455556666766 4567677766555555433444455666666655 5455555444444444333
No 308
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=65.64 E-value=1.1e+02 Score=28.11 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=18.7
Q ss_pred CchhHHHHHHhHHHHHhHHHHHHHHHhhc
Q 014646 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGS 105 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 105 (421)
+|.+...+.......+..+-|+++-+.-.
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 46666777666666677777776555433
No 309
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=65.53 E-value=9.6 Score=29.49 Aligned_cols=9 Identities=11% Similarity=0.346 Sum_probs=3.7
Q ss_pred hhhhHHHHH
Q 014646 366 KTTLALTSI 374 (421)
Q Consensus 366 ~~~~~~~~~ 374 (421)
-.++++.++
T Consensus 96 R~~~Vl~g~ 104 (163)
T PF06679_consen 96 RALYVLVGL 104 (163)
T ss_pred hhHHHHHHH
Confidence 344444333
No 310
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=62.57 E-value=1.3e+02 Score=27.95 Aligned_cols=47 Identities=21% Similarity=0.108 Sum_probs=32.1
Q ss_pred CCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHH
Q 014646 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 124 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 124 (421)
+.+++.+...++.+++.+.|...-|...+.. |=++..+..+++-+..
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-----Gf~p~lillll~~p~m 63 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-----GLIPILLMLVLAYPIA 63 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHH
Confidence 3455678899999999999998888877653 5555555544443333
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=53.94 E-value=36 Score=26.11 Aligned_cols=32 Identities=6% Similarity=-0.112 Sum_probs=21.5
Q ss_pred ccccchhhhhhcccCcchhHHHHHHHHHHHHH
Q 014646 313 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
+..+..|.+++..-.++..|+..|+-..-.|.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 33445666777777778888888887654444
No 312
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.90 E-value=64 Score=22.90 Aligned_cols=19 Identities=32% Similarity=0.553 Sum_probs=11.3
Q ss_pred HHHHHHhHHHHHHHhhccc
Q 014646 251 CGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 251 ~~~~~~~~~g~l~d~~~~~ 269 (421)
.+++.....||+.||+-..
T Consensus 54 sGilVGa~iG~llD~~agT 72 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 3444455567888887543
No 313
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=50.63 E-value=1.7e+02 Score=25.35 Aligned_cols=67 Identities=12% Similarity=0.056 Sum_probs=30.9
Q ss_pred hhHhhhchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhccc
Q 014646 196 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 196 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
..+++.++|+.+............+.....|.|. .++.-+.+..+..-+.+.-++|.++ +-||+.|-
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn----~g~~leaSLGY~InPL~~VllG~lf---lkErls~~ 127 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN----NGHVLEASLGYFINPLVNVLLGRLF---LKERLSRL 127 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC----CCchhHHHhHHHHHHHHHHHHHHHH---HHhhccHH
Confidence 4555777777666555444444444444444442 2222222333323333333334333 45666554
No 314
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=49.16 E-value=1.3e+02 Score=23.63 Aligned_cols=58 Identities=10% Similarity=-0.016 Sum_probs=35.5
Q ss_pred ccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhc-cc-----chhHHHHHhHHHHHHHHHHHH
Q 014646 71 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HL-----NWRYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 71 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~-----gwr~~f~~~~~~~~~~~~~~~ 128 (421)
..+|.+++.+..+.+.++...+...--.+=+.+.. +. .+...+++.++++.+..++.=
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 45566667777777766666655444444333332 22 578888999887766555443
No 315
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=48.66 E-value=4.8 Score=35.41 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=3.6
Q ss_pred chhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHH
Q 014646 42 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 102 (421)
Q Consensus 42 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 102 (421)
+|-+..++.-++.|+..|-.......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777889999999999999999999999999999988888888888888888876543
No 316
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=46.60 E-value=31 Score=29.16 Aligned_cols=8 Identities=25% Similarity=0.322 Sum_probs=3.4
Q ss_pred HHHHhhhh
Q 014646 353 LVGVLQDH 360 (421)
Q Consensus 353 ~~g~l~~~ 360 (421)
+.||...+
T Consensus 94 l~Gw~~gr 101 (254)
T PF07857_consen 94 LTGWASGR 101 (254)
T ss_pred HHHHHHhh
Confidence 34444433
No 317
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=45.31 E-value=60 Score=24.91 Aligned_cols=79 Identities=9% Similarity=-0.009 Sum_probs=46.7
Q ss_pred hhhhhcCchHHHHHHHHHHHHHHhhhcc-----------cchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhH
Q 014646 13 SLAKSHNPFRLIGVGLSVWTFATAGCGS-----------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 13 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.++||.-||..+..|. -.++|...+.. .+++..++..-.+.|+|.-+ ..+.+++--.++++.|..
T Consensus 56 ~Vs~RM~rRm~~~~Gi-P~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGI-PTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLG---ISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHh---hhhhhcccccCCCCCCCc
Confidence 4678876666554443 22222222111 24555555555555554432 456667777888889999
Q ss_pred HHHHHhHHHHHhHH
Q 014646 82 LSMFYMCIPTGVAL 95 (421)
Q Consensus 82 ~~~~~~~~~~G~~~ 95 (421)
+|+-..-.+++-+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99988888876554
No 318
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=45.27 E-value=32 Score=30.65 Aligned_cols=121 Identities=15% Similarity=0.054 Sum_probs=78.5
Q ss_pred cchhhHHHhhhhhcCchH--HHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCCchhHH
Q 014646 5 LVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 5 ~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+++.+..|++--++.|.. .+.++.+.-+...++++.+++.|..+++-++.+.......+.+..-+++..+.+.-|..+
T Consensus 285 a~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvF 364 (433)
T KOG3810|consen 285 AIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVF 364 (433)
T ss_pred HHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeee
Confidence 567778888877666553 455566666667777888889999888888888777777778888888888888778777
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccc-----------hhHHHHHhHHHHHHHHHHHH
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLN-----------WRYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~g-----------wr~~f~~~~~~~~~~~~~~~ 128 (421)
|+..... .++=.++.-.+.+.-| +..-|.+.+++.++...+.+
T Consensus 365 GiNTFvA---l~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 365 GINTFVA---LILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred ehHHHHH---HHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 7655432 2333333333333211 22346666666555544433
No 319
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=44.05 E-value=51 Score=22.52 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=9.6
Q ss_pred ccCCchhHHHHhhhhhh
Q 014646 346 GDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 346 g~~~~~~~~g~l~~~~~ 362 (421)
++++| .+.|+..+.++
T Consensus 35 ~aiVg-~i~Gf~~Qqls 50 (101)
T KOG4112|consen 35 GAIVG-FIYGFAQQQLS 50 (101)
T ss_pred HHHHH-HHHHHHHHHHH
Confidence 54553 36677777655
No 320
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=43.60 E-value=30 Score=24.62 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=23.8
Q ss_pred hcccchhHHHHHhHHHHHHHHHHHHhccccc
Q 014646 104 GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 104 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
.+..+|+.+|++...++++.+.+.+.+.|+.
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3456899999998877777777777777764
No 321
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=42.72 E-value=3e+02 Score=26.04 Aligned_cols=9 Identities=0% Similarity=0.379 Sum_probs=4.9
Q ss_pred HHHHhhccc
Q 014646 261 FILDQMGAT 269 (421)
Q Consensus 261 ~l~d~~~~~ 269 (421)
.+.+|++++
T Consensus 106 ~l~k~l~~~ 114 (465)
T PF03606_consen 106 LLIKPLKGK 114 (465)
T ss_pred HHHHHhcCC
Confidence 344666554
No 322
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=42.12 E-value=83 Score=19.43 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=28.3
Q ss_pred hHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHh
Q 014646 87 MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 129 (421)
Q Consensus 87 ~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 129 (421)
.+.-+|.+++.+.+..-...+++.....+..+.+++..++...
T Consensus 9 Ws~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~ 51 (57)
T PF11151_consen 9 WSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAV 51 (57)
T ss_pred HHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 3445677888877777666777777766666666555555443
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=40.07 E-value=1.3e+02 Score=26.08 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhhccc-chhHHHHHHHHHhhhhhhhh
Q 014646 24 IGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASF 61 (421)
Q Consensus 24 l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~ 61 (421)
++.+++++++++++..+. ++.+.+.+.-++.+++.++.
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 345555565555555544 44555555666666666543
No 324
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.85 E-value=43 Score=23.71 Aligned_cols=39 Identities=21% Similarity=0.127 Sum_probs=30.5
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 42 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 42 (421)
+++.++++++..|+.-+.+.=.+|..+..++..+..+.|
T Consensus 67 fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 67 FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 467889999999999888887888877777777665543
No 325
>PRK10263 DNA translocase FtsK; Provisional
Probab=38.13 E-value=3.5e+02 Score=29.32 Aligned_cols=22 Identities=14% Similarity=0.237 Sum_probs=13.7
Q ss_pred hHhHHHHHHHhHHHHHHHhhcc
Q 014646 247 VTIVCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 247 ~~~~~~~~~~~~~g~l~d~~~~ 268 (421)
+.+.++.+|..+...+..-+|.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3456666666666666666664
No 326
>PRK02237 hypothetical protein; Provisional
Probab=35.45 E-value=56 Score=23.22 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=28.9
Q ss_pred ccchhhHHHhhhhhcCchHHHHHHHHHHHHHHhhhcccc
Q 014646 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 42 (421)
Q Consensus 4 ~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 42 (421)
+++.++++++..|+.-+-+.=.+|..+..++..+..+.+
T Consensus 69 yI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 69 YVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 456788999999988887777777777777766655443
No 327
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=33.58 E-value=3.4e+02 Score=24.42 Aligned_cols=108 Identities=9% Similarity=0.011 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccchhhHHHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHHHH
Q 014646 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 283 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 283 (421)
++++.........+..+.+........-. +....+. ....+.-+...++.+.+++++|-| ..+......
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~---~lg~~sl---~~~y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~ 97 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNY---DLGTVSL---GALYLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFP 97 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhc---Ccccchh---hhhhHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHH
Confidence 44555555555555555555443332222 1111111 122344455666667899999988 555444433
Q ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHhccccchhhhhh
Q 014646 284 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 323 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (421)
.......- ..+.....+......|++.+..+..--+++.
T Consensus 98 Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT 136 (390)
T KOG3097|consen 98 YALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLT 136 (390)
T ss_pred HHHHHHhh-cchhHHhhccHHHhhccccccccccCcceec
Confidence 33222221 1223333444444555555555544444433
No 328
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=33.47 E-value=3.9e+02 Score=24.70 Aligned_cols=19 Identities=11% Similarity=0.067 Sum_probs=10.2
Q ss_pred HHHHHHHHHhhcccchhHH
Q 014646 94 ALGYVYGGVVGSHLNWRYA 112 (421)
Q Consensus 94 ~~g~~~~~~l~~~~gwr~~ 112 (421)
....++.|.+.++...+..
T Consensus 112 ~a~~IvsGavaeR~~~~~~ 130 (404)
T TIGR03644 112 TAMSIVSGAVAERMKLWPF 130 (404)
T ss_pred HHHHHHHhHhhhcccHHHH
Confidence 3344556667766554433
No 329
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=33.33 E-value=2.8e+02 Score=24.13 Aligned_cols=56 Identities=11% Similarity=0.141 Sum_probs=34.7
Q ss_pred HHHHHHHhhhhhhhhcccccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHh
Q 014646 47 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 47 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
.-..|.+.|+-.- .+..+++++.-.+|++++--..--.....++..++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5668888887765 4456888899999966553333333444445555556555444
No 330
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=32.88 E-value=3.9e+02 Score=24.55 Aligned_cols=18 Identities=11% Similarity=0.257 Sum_probs=13.5
Q ss_pred hccCCchhHHHHhhhhhh
Q 014646 345 FGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 345 ~g~~~~~~~~g~l~~~~~ 362 (421)
....++|.+.|.+....+
T Consensus 186 ~tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 186 STNLLAPVITGLIITFVS 203 (503)
T ss_pred hhhchhhhhhcccceeec
Confidence 366788988888887654
No 331
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=31.91 E-value=2e+02 Score=28.85 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=35.1
Q ss_pred hhHHHhhhhh----cCchHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHhhhhhhhh
Q 014646 8 SPIFASLAKS----HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASF 61 (421)
Q Consensus 8 ~~~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~ 61 (421)
+.+.+-++|. -||.+-++++.++++++++...+.. ..+.+...-++.+++.++.
T Consensus 40 G~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 40 GIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 3445667775 3566778888888888888777654 4455555666666655543
No 332
>PRK10720 uracil transporter; Provisional
Probab=31.21 E-value=3.4e+02 Score=25.35 Aligned_cols=19 Identities=21% Similarity=-0.078 Sum_probs=9.2
Q ss_pred HHHHHHHHHHhcccccccc
Q 014646 119 LMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 119 ~~~~~~~~~~~~~p~~~~~ 137 (421)
.+.+.+++.-.+.|...++
T Consensus 393 ~g~~~ai~Lnlll~~~~~~ 411 (428)
T PRK10720 393 LATIVGIGLSLIFKLISKL 411 (428)
T ss_pred HHHHHHHHHHHHhcccccc
Confidence 3344444444445654444
No 333
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=30.90 E-value=2.1e+02 Score=28.74 Aligned_cols=53 Identities=19% Similarity=0.190 Sum_probs=35.0
Q ss_pred hHHHhhhhhc----CchHHHHHHHHHHHHHHhhhcccchh-HHHHHHHHHhhhhhhhh
Q 014646 9 PIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFDF-WSIAICRMLVGVGEASF 61 (421)
Q Consensus 9 ~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~~~~~~ 61 (421)
.+.+-+.|.= ||.+-++++.++++++++...+...+ +.+...-++.+++.++.
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3445677753 55777899999999888888766544 44555555666655543
No 334
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=29.17 E-value=4.8e+02 Score=24.42 Aligned_cols=20 Identities=10% Similarity=0.267 Sum_probs=8.6
Q ss_pred HHHHHHHhHHHHHHHhhccc
Q 014646 250 VCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~~ 269 (421)
+.+.+....+|-+-.|.|.|
T Consensus 338 lTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 338 LTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred hcccccccccceeeehhccH
Confidence 33333334444444455443
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.84 E-value=2.1e+02 Score=20.18 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=19.4
Q ss_pred HHHHhHHHHHhHHHHHHHHHhhcccc----hhHHHHHhHH
Q 014646 83 SMFYMCIPTGVALGYVYGGVVGSHLN----WRYAFWGEAI 118 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~g----wr~~f~~~~~ 118 (421)
|.......+..++|..+|-++-.+++ |-.+|++.|+
T Consensus 46 g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 33444444455566666666666554 4455555544
No 336
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.80 E-value=4.7e+02 Score=24.18 Aligned_cols=18 Identities=11% Similarity=0.290 Sum_probs=10.1
Q ss_pred HHHHHHHHHhhcccchhH
Q 014646 94 ALGYVYGGVVGSHLNWRY 111 (421)
Q Consensus 94 ~~g~~~~~~l~~~~gwr~ 111 (421)
....++.+.+.++...+.
T Consensus 105 ~t~~I~sGavaeR~~~~~ 122 (403)
T TIGR00836 105 IAATIISGAVAERMKFSA 122 (403)
T ss_pred HHHHHHHHHHhhcccHHH
Confidence 344555667777655443
No 337
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=28.64 E-value=77 Score=25.30 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=16.5
Q ss_pred ccccchhhHHHhhhhhcCc
Q 014646 2 VGLLVASPIFASLAKSHNP 20 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Gr 20 (421)
+|+.+++.+.|++.||..+
T Consensus 93 ~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 93 IGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 5778889999999999875
No 338
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=27.71 E-value=77 Score=21.59 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=30.8
Q ss_pred cccchhhHHHhhhhhcCc-------hHHHHHHHHHHHHHHhhhcccch
Q 014646 3 GLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFD 43 (421)
Q Consensus 3 g~~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~ 43 (421)
+...+.+.++++.+|.-+ ++.+..+.++...+.++++..+|
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 345667888888888765 77888888888888888776554
No 339
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=25.53 E-value=1.5e+02 Score=17.44 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=16.2
Q ss_pred HhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHH
Q 014646 92 GVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 127 (421)
Q Consensus 92 G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 127 (421)
|..+|..+.+.+....++.+.-++.++++.+..+..
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 444444444433332334555555555554444433
No 340
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=25.05 E-value=3.5e+02 Score=21.47 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=20.7
Q ss_pred HHhhHhHHHHHHHhHHHHHHHhhcccccc
Q 014646 244 FGGVTIVCGIVGTISGGFILDQMGATISN 272 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 272 (421)
.....++++++|=+.+.++=+|+|.++..
T Consensus 90 ~g~ll~~gamlGDl~~SFIKRRlgi~~G~ 118 (175)
T PF01864_consen 90 LGFLLGLGAMLGDLPGSFIKRRLGIPRGA 118 (175)
T ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCCCCC
Confidence 34556677788888888888888876443
No 341
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=24.77 E-value=49 Score=24.64 Aligned_cols=19 Identities=16% Similarity=0.464 Sum_probs=9.0
Q ss_pred hHHHHHhHHHHHHHHHHHH
Q 014646 110 RYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 110 r~~f~~~~~~~~~~~~~~~ 128 (421)
||++++..++.+++.++++
T Consensus 1 RW~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLF 19 (130)
T ss_pred CeeeHHHHHHHHHHHHHHH
Confidence 4566555544444433333
No 342
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=24.67 E-value=6.7e+02 Score=24.56 Aligned_cols=24 Identities=25% Similarity=0.299 Sum_probs=12.0
Q ss_pred HhHHHHHhHHHHHHHHHhhcccch
Q 014646 86 YMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 86 ~~~~~~G~~~g~~~~~~l~~~~gw 109 (421)
...+.+|.++...+.|.+....||
T Consensus 212 ~l~y~lG~~~ty~~lG~~a~~~G~ 235 (571)
T PRK00293 212 SFVYVQGMALTYTLLGLVVAAAGL 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555655555554444443343
No 343
>PF03605 DcuA_DcuB: Anaerobic c4-dicarboxylate membrane transporter; InterPro: IPR004668 These proteins are members of the C4-Dicarboxylate Uptake (Dcu) family. Most proteins in this family are predicted to have 12 GES predicted transmembrane regions; however the one member whose membrane topology has been experimentally determined has 10 transmembrane regions, with both the N- and C-termini localized to the periplasm []. The DcuA and DcuB proteins are involved in the transport of aspartate, malate, fumarate and succinate in many species [, , ], and are thought to function as antiporters with any two of these substrates. Since DcuA is encoded in an operon with the gene for aspartase, and DcuB is encoded in an operon with the gene for fumarase, their physiological functions may be to catalyze aspartate:fumarate and fumarate:malate exchange during the anaerobic utilization of aspartate and fumarate, respectively []. The Escherichia coli DcuA and DcuB proteins have very different expression patterns []. DcuA is constitutively expressed; DcuB is strongly induced anaerobically by FNR and C4-dicarboxylates, while it is repressed by nitrate and subject to CRP-mediated catabolite repression.; GO: 0015556 C4-dicarboxylate transmembrane transporter activity, 0015740 C4-dicarboxylate transport, 0016021 integral to membrane
Probab=24.53 E-value=1.4e+02 Score=26.87 Aligned_cols=11 Identities=9% Similarity=0.093 Sum_probs=6.8
Q ss_pred HHHhhcccccc
Q 014646 262 ILDQMGATISN 272 (421)
Q Consensus 262 l~d~~~~~~~~ 272 (421)
+++|+-||+++
T Consensus 72 ~Aek~LRk~Pk 82 (364)
T PF03605_consen 72 IAEKILRKNPK 82 (364)
T ss_pred HHHHHHHhCCC
Confidence 55676666554
No 344
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=24.40 E-value=3.8e+02 Score=21.63 Aligned_cols=29 Identities=3% Similarity=0.048 Sum_probs=19.4
Q ss_pred hHHHHhhHhHHHHHHHhHHHHHHHhhccc
Q 014646 241 DMMFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
...+...++++.++..+..+....+.+++
T Consensus 152 G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 152 GALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33555667777777777777777776654
No 345
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=24.16 E-value=26 Score=29.67 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=0.0
Q ss_pred HHhHHHHHHHhhccc
Q 014646 255 GTISGGFILDQMGAT 269 (421)
Q Consensus 255 ~~~~~g~l~d~~~~~ 269 (421)
+..+.-++..++|..
T Consensus 121 ~vW~Ym~lLr~~GAs 135 (381)
T PF05297_consen 121 GVWFYMWLLRELGAS 135 (381)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHhhhH
Confidence 334445566666665
No 346
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=23.77 E-value=4.3e+02 Score=22.01 Aligned_cols=27 Identities=4% Similarity=-0.020 Sum_probs=17.0
Q ss_pred HHHHhhHhHHHHHHHhHHHHHHHhhcc
Q 014646 242 MMFGGVTIVCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~ 268 (421)
......++++.....+..|..++++..
T Consensus 167 al~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 167 ALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred HHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 344455666666666777777777654
No 347
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=23.75 E-value=92 Score=22.79 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=9.1
Q ss_pred hhhhhhHHHHHHHHHHHHh
Q 014646 364 WRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~ 382 (421)
|.+..+..++++++..+++
T Consensus 35 WNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 35 WNYSILALSFVVLVISFFL 53 (125)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 5555555554444433333
No 348
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=23.55 E-value=6.4e+02 Score=23.91 Aligned_cols=33 Identities=9% Similarity=-0.180 Sum_probs=23.7
Q ss_pred CchHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 014646 19 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 51 (421)
Q Consensus 19 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r 51 (421)
|.|+...-..+.+.++++.-++.+++....+.-
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~ 371 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQS 371 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 455556666677888899999998887665433
No 349
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=23.42 E-value=1.2e+02 Score=23.31 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=17.0
Q ss_pred ccccchhhHHHhhhhhcCchH
Q 014646 2 VGLLVASPIFASLAKSHNPFR 22 (421)
Q Consensus 2 lg~~~~~~~~g~l~dr~Grr~ 22 (421)
+|+.+.+.+.|++.+|..+++
T Consensus 64 ~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 64 LGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 567788888999999988764
No 350
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=23.36 E-value=2.3e+02 Score=18.74 Aligned_cols=51 Identities=10% Similarity=0.166 Sum_probs=25.5
Q ss_pred HHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhcccccccc
Q 014646 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 137 (421)
+--+.+....++.+++-+.| ++.+ +.+..+++.++-. ++..+...|+.+-.
T Consensus 9 ae~l~~~il~~~~iisfi~G-y~~q--~~~~~~~~~~~g~---~~~~lv~vP~Wp~y 59 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVG-YITQ--SFSYTFYIYGAGV---VLTLLVVVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHH---HHHHhheeCCcHhh
Confidence 33444555555555555444 3333 2566666665433 23333445776654
No 351
>PF14851 FAM176: FAM176 family
Probab=22.67 E-value=2.6e+02 Score=21.63 Aligned_cols=7 Identities=14% Similarity=0.363 Sum_probs=3.4
Q ss_pred HHHhhhh
Q 014646 354 VGVLQDH 360 (421)
Q Consensus 354 ~g~l~~~ 360 (421)
+.++.++
T Consensus 12 ya~I~~~ 18 (153)
T PF14851_consen 12 YAHIRDN 18 (153)
T ss_pred HHHHHhC
Confidence 3455554
No 352
>PRK10712 PTS system fructose-specific transporter subunits IIBC; Provisional
Probab=22.57 E-value=7.3e+02 Score=24.26 Aligned_cols=19 Identities=16% Similarity=0.520 Sum_probs=10.5
Q ss_pred HHHHHHHhHHHHHHHhhcc
Q 014646 250 VCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~ 268 (421)
++++++.++.|++...+.+
T Consensus 317 lG~Ilag~lagyv~~~l~K 335 (563)
T PRK10712 317 IGGIIAGFLAGYVAKLIST 335 (563)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4555666666665554443
No 353
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=22.28 E-value=2.2e+02 Score=18.20 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=13.5
Q ss_pred chhHHHHHhHHHHHHHHHHHHhcccccccc
Q 014646 108 NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 108 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 137 (421)
||-.++.+...+.++..-..=..+||..+.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 344455444443333333333445775443
No 354
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.97 E-value=1.6e+02 Score=19.36 Aligned_cols=61 Identities=10% Similarity=-0.000 Sum_probs=35.6
Q ss_pred hhhhhcCchHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHhhhhhhhhcccccccccccCCCCC
Q 014646 13 SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 13 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
+--|+-.|++-+.+.+.+-..+.++..+....+.+-+ .. +..+...|-.-.++++--++++
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~la~---~~-~~~av~LPwvAVviAN~~~~~~ 69 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWLAW---AI-IVGAVPLPWVAVVIANARPPRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---HH-HHHhcccchhheeeccCCCCCC
Confidence 4457778888898888888877777776665422211 11 1223445555555555544443
No 355
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=21.74 E-value=4.2e+02 Score=21.19 Aligned_cols=54 Identities=9% Similarity=-0.042 Sum_probs=28.6
Q ss_pred cccccccccCCCCCchhHHHHHHhHHHHHhHHHHHHHHHhhcccchhHHHHHhHHH
Q 014646 64 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 119 (421)
Q Consensus 64 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~gwr~~f~~~~~~ 119 (421)
...+++.+..|+++|.++.-+-..+..+--.+--..+.++.+. |++..++.|+.
T Consensus 16 ~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 16 FVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 4455666778887666555433222223333444455566554 45666666543
No 356
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=21.41 E-value=2.2e+02 Score=17.84 Aligned_cols=38 Identities=11% Similarity=-0.098 Sum_probs=21.3
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhccc
Q 014646 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
|+|+......+..+.+.........|...|+++..+..
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGIK 39 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCCe
Confidence 45555555555555444444455556666776655544
No 357
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=21.05 E-value=6.2e+02 Score=22.82 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=23.3
Q ss_pred HHHhhHhHHHHHHHhHHHHHHHhhcccccchhhHHHHHH
Q 014646 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
....+.++.........|++.|++-++..+.++.+...+
T Consensus 263 ~~~~v~~~~~a~l~~~~G~iid~~l~~~~~~~~~i~~~~ 301 (344)
T PF04123_consen 263 LYGSVPWLALAALIASLGKIIDEYLRRDFRLWRYINAPF 301 (344)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCcchHHHHHHHH
Confidence 334555655555567788999987666554444443333
No 358
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=20.99 E-value=8.8e+02 Score=24.57 Aligned_cols=52 Identities=10% Similarity=0.036 Sum_probs=24.8
Q ss_pred HHHHHhhcccccchhhHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 014646 260 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 260 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+-++|.=++.+.+.+.+++.........+......+.++.+...+.+..++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 4466655554333334443333333344444444555655555555544443
No 359
>COG2056 Predicted permease [General function prediction only]
Probab=20.59 E-value=6.5e+02 Score=22.86 Aligned_cols=20 Identities=5% Similarity=-0.197 Sum_probs=10.7
Q ss_pred hhhhHHHHHHHHHHHHhhhh
Q 014646 366 KTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~ 385 (421)
.+.++-+..++++.++.++.
T Consensus 192 ~am~ip~lgMi~GLl~ai~~ 211 (444)
T COG2056 192 KAMWIPGLGMIVGLLLAIFV 211 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555555666665554433
No 360
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=20.15 E-value=4.2e+02 Score=21.50 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=23.7
Q ss_pred CCCchhHHHHHHhHHHHHhHHHHHHHHHhhc
Q 014646 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 105 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 105 (421)
.++.+++..+--.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4456788888888888888888888877754
Done!