Query 014650
Match_columns 421
No_of_seqs 230 out of 2621
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:23:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014650.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014650hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 1.1E-43 3.9E-48 331.6 33.2 281 70-421 14-302 (302)
2 3ii7_A Kelch-like protein 7; p 100.0 3.1E-43 1E-47 329.2 33.6 278 70-417 10-293 (306)
3 1zgk_A Kelch-like ECH-associat 100.0 3.8E-43 1.3E-47 329.0 31.8 279 68-416 21-307 (308)
4 2vpj_A Kelch-like protein 12; 100.0 4.9E-42 1.7E-46 320.2 31.0 276 70-417 13-299 (301)
5 4asc_A Kelch repeat and BTB do 100.0 3.1E-42 1E-46 323.9 29.7 290 71-420 4-299 (315)
6 2woz_A Kelch repeat and BTB do 100.0 3.2E-41 1.1E-45 317.3 27.5 290 70-420 14-309 (318)
7 2uvk_A YJHT; unknown function, 100.0 1.4E-37 4.9E-42 297.1 27.7 288 68-403 16-352 (357)
8 2xn4_A Kelch-like protein 2; s 100.0 1.9E-36 6.4E-41 282.6 24.5 262 40-358 31-302 (302)
9 2woz_A Kelch repeat and BTB do 100.0 1.6E-36 5.4E-41 285.3 20.8 269 42-362 27-314 (318)
10 4asc_A Kelch repeat and BTB do 100.0 1.3E-36 4.3E-41 285.5 20.1 270 42-363 16-305 (315)
11 1zgk_A Kelch-like ECH-associat 100.0 7.4E-36 2.5E-40 279.5 23.0 258 38-354 38-308 (308)
12 3ii7_A Kelch-like protein 7; p 100.0 8.5E-36 2.9E-40 278.7 21.7 264 39-356 24-295 (306)
13 2vpj_A Kelch-like protein 12; 100.0 2E-35 6.9E-40 275.4 21.6 258 39-355 31-300 (301)
14 2uvk_A YJHT; unknown function, 100.0 4.4E-35 1.5E-39 279.8 24.3 275 98-417 2-315 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 4.5E-32 1.5E-36 279.9 23.8 270 70-393 396-694 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 3.5E-31 1.2E-35 273.3 25.1 241 94-400 377-642 (695)
17 1k3i_A Galactose oxidase precu 100.0 6.3E-32 2.2E-36 278.2 14.5 311 44-417 171-518 (656)
18 1k3i_A Galactose oxidase precu 100.0 6.2E-29 2.1E-33 255.9 21.7 278 85-417 167-464 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 98.7 5.2E-06 1.8E-10 80.4 25.2 46 14-59 12-57 (445)
20 1p22_A F-BOX/WD-repeat protein 98.6 6.8E-06 2.3E-10 79.5 20.8 39 21-59 11-53 (435)
21 1fs1_A SKP2 F-BOX, cyclin A/CD 98.4 1.8E-07 6E-12 61.8 4.3 46 17-62 5-50 (53)
22 3v7d_B Cell division control p 98.4 9.5E-05 3.3E-09 71.7 24.7 39 19-57 13-51 (464)
23 2e31_A FBS1, F-box only protei 97.9 2.8E-06 9.7E-11 76.6 1.9 49 18-66 48-97 (297)
24 3dsm_A Uncharacterized protein 97.9 0.0061 2.1E-07 56.3 24.1 227 83-396 16-256 (328)
25 3dsm_A Uncharacterized protein 97.8 0.0038 1.3E-07 57.7 20.9 241 70-392 52-301 (328)
26 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.058 2E-06 50.4 23.7 118 85-242 154-285 (376)
27 3mbr_X Glutamine cyclotransfer 97.4 0.053 1.8E-06 47.4 21.4 100 113-242 23-122 (243)
28 3vgz_A Uncharacterized protein 97.4 0.054 1.8E-06 49.6 22.8 115 68-214 49-177 (353)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.066 2.3E-06 49.9 22.3 221 70-395 102-339 (376)
30 3bws_A Protein LP49; two-domai 97.2 0.013 4.5E-07 55.7 16.6 98 85-213 102-203 (433)
31 3nol_A Glutamine cyclotransfer 97.1 0.087 3E-06 46.5 20.0 99 114-242 46-144 (262)
32 1l0q_A Surface layer protein; 97.1 0.023 7.9E-07 53.2 17.0 137 68-244 40-179 (391)
33 1l0q_A Surface layer protein; 97.0 0.034 1.2E-06 52.0 17.7 133 73-245 3-138 (391)
34 2z2n_A Virginiamycin B lyase; 97.0 0.19 6.4E-06 44.6 22.5 122 85-242 79-201 (299)
35 3mbr_X Glutamine cyclotransfer 96.9 0.027 9.4E-07 49.2 14.5 134 70-240 29-165 (243)
36 2iwa_A Glutamine cyclotransfer 96.9 0.15 5.1E-06 45.3 19.4 100 114-242 24-124 (266)
37 3nok_A Glutaminyl cyclase; bet 96.8 0.14 4.9E-06 45.2 18.7 95 114-242 58-153 (268)
38 4a2l_A BT_4663, two-component 96.8 0.51 1.7E-05 48.9 26.1 231 86-400 379-621 (795)
39 1k8k_C P40, ARP2/3 complex 41 96.7 0.11 3.6E-06 47.9 18.5 145 69-246 18-165 (372)
40 1ri6_A Putative isomerase YBHE 96.7 0.065 2.2E-06 48.7 16.6 64 321-403 253-320 (343)
41 3jrp_A Fusion protein of prote 96.6 0.18 6.2E-06 46.3 19.3 110 69-212 21-136 (379)
42 3u4y_A Uncharacterized protein 96.6 0.11 3.7E-06 47.2 17.3 136 70-243 8-148 (331)
43 3v9f_A Two-component system se 96.5 0.36 1.2E-05 50.0 22.3 227 86-400 385-618 (781)
44 1k8k_C P40, ARP2/3 complex 41 96.5 0.095 3.2E-06 48.2 16.1 101 120-246 19-119 (372)
45 3vgz_A Uncharacterized protein 96.4 0.5 1.7E-05 42.9 21.1 72 120-213 52-123 (353)
46 4ery_A WD repeat-containing pr 96.4 0.47 1.6E-05 42.5 21.1 137 70-246 34-172 (312)
47 4aez_A CDC20, WD repeat-contai 96.3 0.73 2.5E-05 43.1 21.6 57 321-396 327-383 (401)
48 3v9f_A Two-component system se 96.1 1.1 3.7E-05 46.3 23.1 124 85-241 428-556 (781)
49 1nir_A Nitrite reductase; hemo 96.0 0.92 3.1E-05 44.8 21.3 105 71-213 148-260 (543)
50 1jmx_B Amine dehydrogenase; ox 96.0 0.48 1.7E-05 42.9 18.0 67 72-159 11-79 (349)
51 3l2o_B F-box only protein 4; s 96.0 0.0024 8.3E-08 57.0 2.0 42 21-62 5-46 (312)
52 2ast_B S-phase kinase-associat 95.9 0.0036 1.2E-07 57.8 3.3 44 17-60 5-48 (336)
53 1rwi_B Serine/threonine-protei 95.9 0.77 2.6E-05 39.9 20.1 123 84-243 46-169 (270)
54 3hfq_A Uncharacterized protein 95.9 0.23 8E-06 45.4 15.5 28 74-101 53-80 (347)
55 1gxr_A ESG1, transducin-like e 95.9 0.57 2E-05 42.0 17.9 87 145-245 119-205 (337)
56 3fvz_A Peptidyl-glycine alpha- 95.8 1 3.6E-05 40.8 23.3 130 85-244 70-217 (329)
57 2qc5_A Streptogramin B lactona 95.8 0.93 3.2E-05 39.9 23.0 133 72-242 31-164 (300)
58 2hqs_A Protein TOLB; TOLB, PAL 95.8 1.4 4.7E-05 41.7 22.0 187 145-400 203-394 (415)
59 3bws_A Protein LP49; two-domai 95.8 0.55 1.9E-05 44.2 17.9 88 145-245 101-191 (433)
60 3nol_A Glutamine cyclotransfer 95.7 0.13 4.3E-06 45.5 12.0 107 71-213 52-158 (262)
61 2ojh_A Uncharacterized protein 95.7 0.94 3.2E-05 39.5 21.1 107 81-218 19-127 (297)
62 2iwa_A Glutamine cyclotransfer 95.7 0.33 1.1E-05 43.1 14.9 133 72-241 32-168 (266)
63 3jro_A Fusion protein of prote 95.6 0.21 7.3E-06 51.5 15.5 108 70-211 20-133 (753)
64 2ovr_B FBW7, F-BOX/WD repeat p 95.6 1.6 5.3E-05 41.4 22.4 57 321-397 339-395 (445)
65 2qc5_A Streptogramin B lactona 95.6 1.1 3.8E-05 39.4 21.4 99 114-242 23-122 (300)
66 3dwl_C Actin-related protein 2 95.4 1.2 3.9E-05 41.0 18.5 132 84-246 33-169 (377)
67 2z2n_A Virginiamycin B lyase; 95.4 1.3 4.4E-05 38.9 23.6 121 84-241 36-158 (299)
68 1q7f_A NHL, brain tumor CG1071 95.4 1.3 4.4E-05 39.0 21.1 131 84-243 51-183 (286)
69 3hfq_A Uncharacterized protein 95.3 0.31 1.1E-05 44.5 13.9 62 146-218 19-80 (347)
70 3nok_A Glutaminyl cyclase; bet 95.3 0.17 5.7E-06 44.8 11.2 105 70-213 63-167 (268)
71 3scy_A Hypothetical bacterial 95.3 1.2 4.2E-05 40.7 18.2 86 146-242 30-117 (361)
72 3dwl_C Actin-related protein 2 95.3 0.078 2.7E-06 49.2 9.9 100 120-245 22-122 (377)
73 1p22_A F-BOX/WD-repeat protein 95.2 1.2 4.2E-05 42.0 18.4 97 116-246 138-234 (435)
74 3scy_A Hypothetical bacterial 95.2 1.8 6.2E-05 39.5 19.6 100 85-211 30-130 (361)
75 3fm0_A Protein CIAO1; WDR39,SG 95.2 0.38 1.3E-05 44.2 14.1 101 120-246 27-128 (345)
76 3jrp_A Fusion protein of prote 95.2 1.2 4E-05 40.7 17.6 89 145-245 33-125 (379)
77 1rwi_B Serine/threonine-protei 95.2 1.4 4.9E-05 38.1 19.0 82 145-243 46-127 (270)
78 4aez_A CDC20, WD repeat-contai 95.2 2 6.9E-05 40.0 19.4 136 72-246 104-240 (401)
79 1gxr_A ESG1, transducin-like e 95.1 0.87 3E-05 40.8 16.3 88 146-245 73-163 (337)
80 1ri6_A Putative isomerase YBHE 95.1 0.78 2.7E-05 41.3 15.9 53 145-209 60-114 (343)
81 2ad6_A Methanol dehydrogenase 95.0 2.5 8.4E-05 42.0 20.4 72 115-215 57-141 (571)
82 3bg1_A Protein SEC13 homolog; 94.9 1.2 4.1E-05 40.1 16.5 112 70-215 24-142 (316)
83 3u4y_A Uncharacterized protein 94.9 1.5 5.1E-05 39.3 17.1 94 69-186 49-147 (331)
84 2dg1_A DRP35, lactonase; beta 94.8 1.9 6.6E-05 38.8 17.8 98 120-242 55-153 (333)
85 3fm0_A Protein CIAO1; WDR39,SG 94.8 1.9 6.6E-05 39.2 17.8 144 70-246 27-173 (345)
86 2hes_X YDR267CP; beta-propelle 94.7 2.3 8E-05 38.4 20.2 50 332-400 238-287 (330)
87 3jro_A Fusion protein of prote 94.6 0.93 3.2E-05 46.7 16.6 89 145-245 31-123 (753)
88 4a11_B DNA excision repair pro 94.4 2.5 8.6E-05 38.8 17.8 93 85-212 123-220 (408)
89 3ei3_B DNA damage-binding prot 94.3 1.8 6.2E-05 39.8 16.7 89 145-245 96-185 (383)
90 3zwl_B Eukaryotic translation 94.1 3.2 0.00011 37.4 17.6 53 322-396 296-349 (369)
91 2pm7_B Protein transport prote 94.0 3 0.0001 36.9 19.3 65 121-211 67-133 (297)
92 4g56_B MGC81050 protein; prote 94.0 2.2 7.6E-05 39.1 16.5 99 120-246 150-250 (357)
93 2hes_X YDR267CP; beta-propelle 94.0 2 6.8E-05 38.9 16.0 89 145-245 129-221 (330)
94 1r5m_A SIR4-interacting protei 93.9 3.9 0.00014 37.7 18.5 42 202-245 228-269 (425)
95 3e5z_A Putative gluconolactona 93.9 3.2 0.00011 36.6 18.5 91 120-240 39-131 (296)
96 2aq5_A Coronin-1A; WD40 repeat 93.8 4.1 0.00014 37.7 20.1 100 120-245 93-198 (402)
97 1kb0_A Quinohemoprotein alcoho 93.8 4.2 0.00014 41.3 19.2 71 116-216 73-155 (677)
98 2vdu_B TRNA (guanine-N(7)-)-me 93.8 4.6 0.00016 38.2 20.3 66 321-398 330-398 (450)
99 2p1m_B Transport inhibitor res 93.7 0.026 8.8E-07 56.4 2.5 36 19-54 4-40 (594)
100 3v7d_B Cell division control p 93.5 4.8 0.00017 38.0 18.3 83 145-245 290-372 (464)
101 4a2l_A BT_4663, two-component 93.5 8 0.00027 39.8 28.3 122 85-240 108-231 (795)
102 4e54_B DNA damage-binding prot 93.4 1.2 4.2E-05 42.1 13.8 101 120-246 131-232 (435)
103 4ery_A WD repeat-containing pr 93.1 4.4 0.00015 35.9 16.7 86 145-246 45-130 (312)
104 3odt_A Protein DOA1; ubiquitin 93.0 4.3 0.00015 35.6 16.2 57 321-400 246-303 (313)
105 3ott_A Two-component system se 93.0 8.3 0.00028 39.4 20.2 127 85-240 393-533 (758)
106 3g4e_A Regucalcin; six bladed 92.8 4.9 0.00017 35.6 18.6 89 120-240 24-114 (297)
107 3mkq_A Coatomer beta'-subunit; 92.7 5.2 0.00018 41.0 18.4 107 68-211 22-129 (814)
108 1sq9_A Antiviral protein SKI8; 92.7 5.9 0.0002 36.3 19.9 104 117-246 22-149 (397)
109 3bg1_A Protein SEC13 homolog; 92.6 3.1 0.0001 37.3 14.6 101 120-246 24-128 (316)
110 4gga_A P55CDC, cell division c 92.5 6.8 0.00023 36.6 20.4 94 84-212 125-220 (420)
111 4gqb_B Methylosome protein 50; 92.5 6.2 0.00021 36.0 16.8 88 145-246 103-193 (344)
112 1w6s_A Methanol dehydrogenase 92.5 7.5 0.00026 38.7 18.3 72 115-215 57-147 (599)
113 1q7f_A NHL, brain tumor CG1071 92.4 5.1 0.00017 35.0 23.1 97 120-243 40-140 (286)
114 1n7d_A LDL receptor, low-densi 92.2 4.7 0.00016 41.1 16.8 41 321-363 562-602 (699)
115 1pjx_A Dfpase, DIISOPROPYLFLUO 92.1 5.9 0.0002 35.0 18.2 112 84-215 46-166 (314)
116 2hqs_A Protein TOLB; TOLB, PAL 92.1 7.8 0.00027 36.3 18.7 114 71-216 190-306 (415)
117 1qhu_A Protein (hemopexin); be 92.0 6.3 0.00022 37.7 16.3 48 120-188 158-207 (460)
118 3no2_A Uncharacterized protein 91.9 6.2 0.00021 34.8 24.1 91 84-211 15-109 (276)
119 3pe7_A Oligogalacturonate lyas 91.9 7.3 0.00025 35.6 18.8 36 68-103 44-79 (388)
120 4gga_A P55CDC, cell division c 91.9 3.3 0.00011 38.8 14.5 86 145-246 125-210 (420)
121 1sq9_A Antiviral protein SKI8; 91.9 7.5 0.00026 35.6 18.8 28 122-163 82-115 (397)
122 3sfz_A APAF-1, apoptotic pepti 91.8 13 0.00046 40.2 21.0 124 85-245 638-765 (1249)
123 4e54_B DNA damage-binding prot 91.6 8.9 0.0003 36.0 17.4 64 120-212 220-284 (435)
124 4g56_B MGC81050 protein; prote 91.6 4.2 0.00014 37.2 14.6 87 146-246 116-205 (357)
125 3ow8_A WD repeat-containing pr 91.6 7.3 0.00025 34.9 16.1 85 146-245 59-144 (321)
126 1npe_A Nidogen, entactin; glyc 91.4 6.5 0.00022 34.1 22.9 99 114-242 39-141 (267)
127 3no2_A Uncharacterized protein 91.3 7.2 0.00025 34.3 18.1 77 145-242 15-95 (276)
128 1ijq_A LDL receptor, low-densi 91.1 8.3 0.00028 34.7 24.3 115 85-241 11-138 (316)
129 2pbi_B Guanine nucleotide-bind 90.8 9.4 0.00032 34.7 19.9 43 202-246 177-221 (354)
130 1vyh_C Platelet-activating fac 90.7 11 0.00036 35.2 18.7 97 120-246 161-257 (410)
131 1jmx_B Amine dehydrogenase; ox 90.7 2 6.9E-05 38.6 11.3 52 179-242 11-62 (349)
132 1got_B GT-beta; complex (GTP-b 90.6 8 0.00027 34.9 15.3 53 145-211 77-129 (340)
133 4gqb_B Methylosome protein 50; 90.6 7.3 0.00025 35.5 15.0 98 120-245 138-237 (344)
134 2ynn_A Coatomer subunit beta'; 90.6 8.7 0.0003 34.0 16.2 85 145-246 35-120 (304)
135 4a11_B DNA excision repair pro 90.6 5.5 0.00019 36.4 14.5 88 145-246 122-210 (408)
136 3azo_A Aminopeptidase; POP fam 90.4 15 0.00052 36.5 22.2 60 321-400 316-376 (662)
137 3g4e_A Regucalcin; six bladed 90.3 9.2 0.00031 33.8 19.9 141 71-243 24-169 (297)
138 2pm9_A Protein WEB1, protein t 90.2 11 0.00038 34.6 17.7 56 145-212 89-147 (416)
139 1nir_A Nitrite reductase; hemo 90.1 15 0.00051 36.0 20.6 86 144-243 301-390 (543)
140 3i2n_A WD repeat-containing pr 90.0 6.7 0.00023 35.1 14.3 55 145-212 44-101 (357)
141 3ow8_A WD repeat-containing pr 90.0 10 0.00035 33.9 20.5 85 145-246 102-187 (321)
142 3sfz_A APAF-1, apoptotic pepti 90.0 9.8 0.00034 41.3 17.8 125 85-246 1026-1150(1249)
143 1vyh_C Platelet-activating fac 90.0 12 0.00042 34.8 17.5 96 120-245 119-214 (410)
144 3vl1_A 26S proteasome regulato 89.9 12 0.00041 34.5 17.0 97 120-246 108-204 (420)
145 3ogk_B Coronatine-insensitive 89.7 0.13 4.4E-06 51.3 2.3 35 21-55 13-48 (592)
146 4ggc_A P55CDC, cell division c 89.7 9.9 0.00034 33.3 18.6 82 84-187 45-127 (318)
147 2dg1_A DRP35, lactonase; beta 89.7 11 0.00037 33.6 22.1 119 73-216 57-177 (333)
148 3fvz_A Peptidyl-glycine alpha- 89.7 11 0.00038 33.8 23.5 86 145-243 69-163 (329)
149 2pm7_B Protein transport prote 89.7 10 0.00035 33.4 15.4 100 120-245 20-123 (297)
150 3zwl_B Eukaryotic translation 89.6 11 0.00038 33.7 17.5 83 145-244 54-136 (369)
151 1pby_B Quinohemoprotein amine 89.6 11 0.00036 33.4 20.8 110 84-214 11-128 (337)
152 2pm9_A Protein WEB1, protein t 89.6 12 0.00043 34.2 22.2 55 179-245 178-237 (416)
153 2ojh_A Uncharacterized protein 89.5 9.5 0.00032 32.7 16.0 60 144-219 21-81 (297)
154 3k26_A Polycomb protein EED; W 89.3 12 0.0004 33.5 17.6 98 121-246 85-184 (366)
155 1pjx_A Dfpase, DIISOPROPYLFLUO 89.3 11 0.00037 33.1 19.9 84 145-242 46-135 (314)
156 3c5m_A Oligogalacturonate lyas 89.2 13 0.00043 33.9 16.4 66 144-218 167-233 (396)
157 1kv9_A Type II quinohemoprotei 89.1 20 0.00069 36.1 20.5 72 115-216 61-144 (668)
158 1got_B GT-beta; complex (GTP-b 89.0 13 0.00043 33.5 22.0 43 202-246 165-207 (340)
159 2fp8_A Strictosidine synthase; 88.8 12 0.00043 33.3 18.9 148 72-242 31-204 (322)
160 3vl1_A 26S proteasome regulato 88.8 14 0.00049 33.9 22.2 94 85-212 120-214 (420)
161 1qks_A Cytochrome CD1 nitrite 88.8 19 0.00067 35.4 23.0 106 71-212 166-277 (567)
162 3ei3_B DNA damage-binding prot 88.4 14 0.00049 33.5 23.8 137 72-245 87-227 (383)
163 2z3z_A Dipeptidyl aminopeptida 88.3 23 0.00077 35.6 19.3 18 200-217 234-251 (706)
164 3m0c_C LDL receptor, low-densi 88.1 26 0.00089 36.1 22.2 42 321-364 580-621 (791)
165 3mkq_A Coatomer beta'-subunit; 88.1 9.7 0.00033 38.9 15.4 85 145-245 35-119 (814)
166 3f3f_A Nucleoporin SEH1; struc 87.0 15 0.00052 32.2 20.2 31 355-403 317-348 (351)
167 1r5m_A SIR4-interacting protei 86.8 18 0.00063 32.9 16.4 52 179-245 120-171 (425)
168 2hz6_A Endoplasmic reticulum t 86.4 0.48 1.6E-05 44.2 3.9 66 117-215 6-75 (369)
169 3v65_B Low-density lipoprotein 86.3 21 0.00071 33.1 22.3 116 84-241 96-220 (386)
170 2p4o_A Hypothetical protein; p 85.7 18 0.00063 32.0 17.2 99 114-241 35-134 (306)
171 1yiq_A Quinohemoprotein alcoho 84.8 35 0.0012 34.4 21.5 73 115-217 65-149 (689)
172 3f3f_A Nucleoporin SEH1; struc 84.7 20 0.00068 31.4 17.4 89 145-245 33-134 (351)
173 3ott_A Two-component system se 84.6 37 0.0013 34.5 21.8 78 146-240 83-162 (758)
174 3p5b_L Low density lipoprotein 83.9 28 0.00094 32.4 23.2 118 84-241 92-220 (400)
175 2xbg_A YCF48-like protein; pho 83.8 24 0.00082 31.7 24.1 115 92-242 23-140 (327)
176 3k26_A Polycomb protein EED; W 83.8 23 0.00079 31.5 18.0 96 85-212 96-194 (366)
177 3e5z_A Putative gluconolactona 83.5 22 0.00075 31.0 20.7 109 84-216 50-167 (296)
178 4aow_A Guanine nucleotide-bind 83.2 23 0.0008 31.1 18.9 43 202-246 196-238 (340)
179 3dr2_A Exported gluconolactona 82.9 24 0.00083 31.0 16.0 79 145-240 67-147 (305)
180 1qks_A Cytochrome CD1 nitrite 82.7 39 0.0013 33.3 16.9 61 120-209 166-226 (567)
181 3c7x_A Matrix metalloproteinas 82.7 20 0.00067 29.8 11.9 14 116-129 11-24 (196)
182 2z3z_A Dipeptidyl aminopeptida 82.5 42 0.0014 33.5 23.1 66 144-216 234-300 (706)
183 3hrp_A Uncharacterized protein 81.7 34 0.0012 31.9 17.5 34 171-216 134-167 (409)
184 3ba0_A Macrophage metalloelast 81.2 34 0.0012 31.5 14.1 21 315-335 335-355 (365)
185 3mmy_A MRNA export factor; mRN 80.8 30 0.001 30.7 18.8 96 121-245 54-151 (368)
186 2aq5_A Coronin-1A; WD40 repeat 80.7 34 0.0012 31.3 18.5 57 145-213 57-116 (402)
187 1erj_A Transcriptional repress 80.6 35 0.0012 31.3 20.3 127 85-246 146-279 (393)
188 2ynn_A Coatomer subunit beta'; 80.4 30 0.001 30.4 18.5 142 68-246 22-164 (304)
189 3odt_A Protein DOA1; ubiquitin 79.8 29 0.00099 30.0 19.5 14 385-398 247-260 (313)
190 1erj_A Transcriptional repress 79.7 37 0.0013 31.1 14.7 96 120-246 134-230 (393)
191 3lrv_A PRE-mRNA-splicing facto 79.6 34 0.0012 30.5 19.7 55 179-246 139-193 (343)
192 1pby_B Quinohemoprotein amine 79.4 32 0.0011 30.1 14.2 16 321-336 115-130 (337)
193 1itv_A MMP9; adaptive molecula 79.3 26 0.00088 29.1 13.1 15 115-129 11-25 (195)
194 1pex_A Collagenase-3, MMP-13; 79.3 27 0.00092 29.3 17.7 25 352-396 171-195 (207)
195 3hrp_A Uncharacterized protein 78.4 43 0.0015 31.1 22.4 137 72-242 142-286 (409)
196 3iz6_a 40S ribosomal protein R 77.9 41 0.0014 30.6 19.0 45 202-246 181-229 (380)
197 3azo_A Aminopeptidase; POP fam 77.7 50 0.0017 32.6 15.3 136 84-243 161-313 (662)
198 3hxj_A Pyrrolo-quinoline quino 77.2 37 0.0013 29.8 15.6 88 118-241 105-194 (330)
199 1kb0_A Quinohemoprotein alcoho 77.2 37 0.0013 34.2 14.1 53 173-241 74-135 (677)
200 3b7f_A Glycosyl hydrolase, BNR 77.1 45 0.0015 30.7 18.4 64 146-218 32-98 (394)
201 3v64_C Agrin; beta propeller, 76.5 44 0.0015 30.3 24.0 116 85-242 54-178 (349)
202 1pgu_A Actin interacting prote 76.1 58 0.002 31.4 18.4 44 202-246 468-511 (615)
203 2vdu_B TRNA (guanine-N(7)-)-me 75.3 53 0.0018 30.6 17.7 88 145-245 125-220 (450)
204 3b7f_A Glycosyl hydrolase, BNR 75.0 51 0.0018 30.3 22.1 114 71-217 22-154 (394)
205 2ghs_A AGR_C_1268P; regucalcin 74.7 46 0.0016 29.6 19.3 90 120-241 60-151 (326)
206 1flg_A Protein (quinoprotein e 74.3 70 0.0024 31.5 18.5 71 115-215 63-143 (582)
207 2hz6_A Endoplasmic reticulum t 73.7 8.3 0.00028 35.6 7.6 38 202-245 20-59 (369)
208 3gre_A Serine/threonine-protei 73.3 51 0.0018 30.3 13.3 56 179-246 182-237 (437)
209 4aow_A Guanine nucleotide-bind 73.2 47 0.0016 29.0 21.0 27 120-160 97-123 (340)
210 3iz6_a 40S ribosomal protein R 72.8 55 0.0019 29.7 17.1 87 145-246 180-272 (380)
211 3dr2_A Exported gluconolactona 71.2 53 0.0018 28.7 17.9 141 72-242 57-207 (305)
212 4ggc_A P55CDC, cell division c 69.7 35 0.0012 29.6 10.6 45 202-246 46-90 (318)
213 2xbg_A YCF48-like protein; pho 69.5 62 0.0021 28.9 24.5 133 71-241 46-180 (327)
214 1pgu_A Actin interacting prote 69.0 85 0.0029 30.2 22.2 58 321-398 229-288 (615)
215 3frx_A Guanine nucleotide-bind 68.7 61 0.0021 28.5 16.9 54 179-246 77-130 (319)
216 3c5m_A Oligogalacturonate lyas 66.9 72 0.0024 28.6 21.8 72 322-401 265-337 (396)
217 2pbi_B Guanine nucleotide-bind 66.8 72 0.0025 28.6 13.3 126 85-245 221-348 (354)
218 2p4o_A Hypothetical protein; p 66.8 66 0.0023 28.2 21.2 95 84-211 53-148 (306)
219 2p9w_A MAL S 1 allergenic prot 66.5 76 0.0026 28.7 22.2 155 71-242 24-204 (334)
220 3dm0_A Maltose-binding peripla 66.3 1.1E+02 0.0037 30.5 18.1 64 120-211 441-504 (694)
221 3i2n_A WD repeat-containing pr 65.1 72 0.0025 28.0 12.3 45 201-246 44-91 (357)
222 3frx_A Guanine nucleotide-bind 64.8 73 0.0025 28.0 16.7 43 202-246 177-219 (319)
223 3v65_B Low-density lipoprotein 64.1 89 0.003 28.7 18.2 81 145-243 96-179 (386)
224 1yiq_A Quinohemoprotein alcoho 63.6 55 0.0019 33.0 11.7 65 321-398 131-199 (689)
225 2xzm_R RACK1; ribosome, transl 63.2 81 0.0028 27.9 18.5 12 85-96 99-110 (343)
226 3oyo_A Hemopexin fold protein 63.0 69 0.0024 27.1 15.7 19 354-392 179-197 (225)
227 1n7d_A LDL receptor, low-densi 62.8 48 0.0016 33.5 11.1 52 145-210 386-437 (699)
228 2ecf_A Dipeptidyl peptidase IV 62.5 1.3E+02 0.0044 30.0 19.5 58 145-218 129-189 (741)
229 1yfq_A Cell cycle arrest prote 61.1 84 0.0029 27.4 19.8 43 321-367 273-315 (342)
230 3lrv_A PRE-mRNA-splicing facto 59.2 95 0.0033 27.4 20.6 83 145-242 149-233 (343)
231 2xyi_A Probable histone-bindin 58.4 1.1E+02 0.0039 28.1 13.9 18 181-210 196-213 (430)
232 3mmy_A MRNA export factor; mRN 57.3 1E+02 0.0034 27.1 14.9 65 169-245 41-108 (368)
233 2bkl_A Prolyl endopeptidase; m 56.5 1.6E+02 0.0056 29.3 20.8 130 71-212 79-213 (695)
234 3lp9_A LS-24; SEED albumin, pl 56.0 81 0.0028 26.7 9.8 51 179-243 130-192 (227)
235 3hxj_A Pyrrolo-quinoline quino 55.1 1.1E+02 0.0036 26.7 16.4 122 71-241 107-232 (330)
236 3v64_C Agrin; beta propeller, 54.1 1.2E+02 0.0042 27.2 17.5 80 146-243 54-136 (349)
237 2xyi_A Probable histone-bindin 53.7 1.4E+02 0.0046 27.5 15.0 14 385-398 402-415 (430)
238 2ghs_A AGR_C_1268P; regucalcin 53.4 1.2E+02 0.0041 26.8 19.6 111 72-216 61-174 (326)
239 3sjl_D Methylamine dehydrogena 53.4 1.4E+02 0.0048 27.6 15.3 55 321-398 311-368 (386)
240 4h5i_A Guanine nucleotide-exch 53.1 1.3E+02 0.0044 27.1 19.2 86 145-246 157-242 (365)
241 3sov_A LRP-6, low-density lipo 52.9 1.2E+02 0.0042 26.8 19.5 87 120-241 46-140 (318)
242 1ijq_A LDL receptor, low-densi 52.4 1.2E+02 0.0042 26.7 17.8 80 145-242 10-96 (316)
243 2ecf_A Dipeptidyl peptidase IV 51.9 1.9E+02 0.0065 28.7 19.9 68 69-162 118-189 (741)
244 1gen_A Gelatinase A; hydrolase 51.2 1.1E+02 0.0037 25.7 12.9 15 115-129 35-49 (218)
245 2fp8_A Strictosidine synthase; 51.0 1.3E+02 0.0043 26.4 13.4 16 321-336 165-180 (322)
246 1kv9_A Type II quinohemoprotei 50.7 88 0.003 31.3 10.6 64 321-398 127-194 (668)
247 1qhu_A Protein (hemopexin); be 48.7 1.8E+02 0.0063 27.6 19.3 46 179-243 159-206 (460)
248 3ju4_A Endo-N-acetylneuraminid 48.3 1.8E+02 0.006 27.3 11.1 119 115-244 343-482 (670)
249 3p5b_L Low density lipoprotein 47.5 1.7E+02 0.0059 26.9 17.2 81 145-243 92-179 (400)
250 3m0c_C LDL receptor, low-densi 46.9 2.5E+02 0.0087 28.7 17.5 39 321-363 537-577 (791)
251 3tc9_A Hypothetical hydrolase; 43.9 2E+02 0.0069 26.7 14.1 50 179-244 150-200 (430)
252 3dm0_A Maltose-binding peripla 42.9 2.6E+02 0.0088 27.6 21.1 43 202-246 542-584 (694)
253 3o4h_A Acylamino-acid-releasin 41.8 2.4E+02 0.0083 27.0 16.2 56 321-397 175-231 (582)
254 1su3_A Interstitial collagenas 40.8 2.4E+02 0.0082 26.6 13.0 15 115-129 267-281 (450)
255 3pe7_A Oligogalacturonate lyas 39.1 2.1E+02 0.007 25.4 15.6 62 145-220 60-121 (388)
256 3a0f_A Xyloglucanase; beta-pro 38.4 3.3E+02 0.011 27.6 14.5 157 155-399 529-723 (763)
257 1itv_A MMP9; adaptive molecula 37.5 1.4E+02 0.0049 24.4 8.2 103 71-212 64-176 (195)
258 4a0p_A LRP6, LRP-6, low-densit 36.3 3.3E+02 0.011 26.9 26.6 119 85-241 16-141 (628)
259 2xdw_A Prolyl endopeptidase; a 35.2 3.5E+02 0.012 26.9 14.5 167 67-287 240-422 (710)
260 1w6s_A Methanol dehydrogenase 34.8 1.4E+02 0.0048 29.4 9.0 76 145-240 453-532 (599)
261 3c7x_A Matrix metalloproteinas 34.7 1.9E+02 0.0065 23.7 10.4 92 119-243 60-166 (196)
262 1hxn_A Hemopexin, HPX; heme, b 33.9 2.1E+02 0.0071 24.0 9.5 22 117-154 69-90 (219)
263 1pex_A Collagenase-3, MMP-13; 32.9 2E+02 0.0067 23.8 8.4 59 120-212 127-194 (207)
264 3o4h_A Acylamino-acid-releasin 32.6 3.4E+02 0.012 26.0 22.2 59 147-218 134-192 (582)
265 1yfq_A Cell cycle arrest prote 30.4 2.6E+02 0.0089 24.0 18.4 84 145-245 33-122 (342)
266 3lp9_A LS-24; SEED albumin, pl 30.1 1E+02 0.0036 26.0 6.3 17 227-243 122-138 (227)
267 3tc9_A Hypothetical hydrolase; 29.4 3.4E+02 0.012 25.1 17.5 135 71-242 149-289 (430)
268 3c75_H MADH, methylamine dehyd 29.4 3.5E+02 0.012 25.2 16.0 78 120-213 84-161 (426)
269 3oyo_A Hemopexin fold protein 29.4 2.5E+02 0.0086 23.5 9.6 51 179-243 128-189 (225)
270 1yr2_A Prolyl oligopeptidase; 28.6 4.5E+02 0.015 26.2 13.9 167 68-289 276-449 (741)
271 2xzm_R RACK1; ribosome, transl 28.5 3E+02 0.01 24.0 17.5 53 145-211 98-150 (343)
272 4a0p_A LRP6, LRP-6, low-densit 28.3 4.4E+02 0.015 26.0 18.4 84 145-242 15-99 (628)
273 1gen_A Gelatinase A; hydrolase 28.2 2.6E+02 0.0089 23.3 12.7 92 120-243 87-193 (218)
274 3iuj_A Prolyl endopeptidase; h 27.4 4.6E+02 0.016 25.9 18.8 81 145-241 259-344 (693)
275 2bkl_A Prolyl endopeptidase; m 27.2 4.6E+02 0.016 25.8 18.9 64 144-214 93-160 (695)
276 2ece_A 462AA long hypothetical 26.1 2.3E+02 0.008 26.8 8.4 134 57-212 9-175 (462)
277 1npe_A Nidogen, entactin; glyc 25.7 2.9E+02 0.01 23.0 21.4 138 71-243 47-187 (267)
278 1fwx_A Nitrous oxide reductase 23.8 1.2E+02 0.0041 29.9 6.1 167 201-411 254-449 (595)
279 3iuj_A Prolyl endopeptidase; h 23.2 5.5E+02 0.019 25.3 15.1 116 70-216 244-365 (693)
280 3gre_A Serine/threonine-protei 22.2 2.2E+02 0.0075 25.9 7.6 58 145-214 192-249 (437)
281 4h5i_A Guanine nucleotide-exch 21.2 4.3E+02 0.015 23.4 15.6 133 84-246 157-292 (365)
282 1nr0_A Actin interacting prote 21.0 3.7E+02 0.013 26.0 9.4 100 120-246 459-559 (611)
283 1hxn_A Hemopexin, HPX; heme, b 20.6 3.7E+02 0.013 22.4 11.5 46 119-187 27-81 (219)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=331.57 Aligned_cols=281 Identities=19% Similarity=0.350 Sum_probs=230.0
Q ss_pred CCceEEEeCCC--CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQD--PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~--~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
.++.+|++||. ...+++++||+.+++|..++++|.+ |.+|++++.+++|||+||.+.. ...+++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~lyv~GG~~~~---------~~~~~~ 79 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR-----RCRAGMVYMAGLVFAVGGFNGS---------LRVRTV 79 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC-----CBSCEEEEETTEEEEESCBCSS---------SBCCCE
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc-----cccceEEEECCEEEEEeCcCCC---------ccccce
Confidence 45778888883 3567899999999999999999865 8999999999999999997533 246889
Q ss_pred EEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCee
Q 014650 148 FRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCV 227 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~ 227 (421)
++||+.+++|+.+++||.+|..|++++++ ++||++||.+ ....++++++||+.+++|+.++++|.+|..|+
T Consensus 80 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~-------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 150 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRDRRSTLGAAVLN--GLLYAVGGFD-------GSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVG 150 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEEEEEC-------SSCEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred EEECCCCCceeeCCCCCccccceEEEEEC--CEEEEEcCCC-------CCccCceEEEEeCCCCeEeecCCCCCcccCce
Confidence 99999999999999999999999999999 9999999975 33567899999999999999999999999887
Q ss_pred EEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccc------cCe
Q 014650 228 GFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSR------IGK 301 (421)
Q Consensus 228 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~ 301 (421)
++++. ++||++||.+.... ...+++++||+.++ +|+.+++++.+ +.. .++
T Consensus 151 ~~~~~--~~iyv~GG~~~~~~--------~~~~~~~~yd~~~~------------~W~~~~~~p~~--r~~~~~~~~~~~ 206 (302)
T 2xn4_A 151 VGVVG--GLLYAVGGYDVASR--------QCLSTVECYNATTN------------EWTYIAEMSTR--RSGAGVGVLNNL 206 (302)
T ss_dssp EEEET--TEEEEECCEETTTT--------EECCCEEEEETTTT------------EEEEECCCSSC--CBSCEEEEETTE
T ss_pred EEEEC--CEEEEEeCCCCCCC--------ccccEEEEEeCCCC------------cEEECCCCccc--cccccEEEECCE
Confidence 77665 89999999865431 23445666666665 99999988764 332 379
Q ss_pred EEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccc
Q 014650 302 IVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRA 381 (421)
Q Consensus 302 i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~ 381 (421)
||++||. ++.. ..+++++||+.+++|+.++++|. +|..++++.++++|||+||.++...
T Consensus 207 iyv~GG~-~~~~-----~~~~~~~yd~~~~~W~~~~~~~~---~r~~~~~~~~~~~i~v~GG~~~~~~------------ 265 (302)
T 2xn4_A 207 LYAVGGH-DGPL-----VRKSVEVYDPTTNAWRQVADMNM---CRRNAGVCAVNGLLYVVGGDDGSCN------------ 265 (302)
T ss_dssp EEEECCB-SSSS-----BCCCEEEEETTTTEEEEECCCSS---CCBSCEEEEETTEEEEECCBCSSSB------------
T ss_pred EEEECCC-CCCc-----ccceEEEEeCCCCCEeeCCCCCC---ccccCeEEEECCEEEEECCcCCCcc------------
Confidence 9999997 3332 23789999999999999998886 5688899999999999999875432
Q ss_pred eeeEEEEEeCCcceeeEecccCCCCCCCCccceeEEEeeC
Q 014650 382 GCLFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMCTVRL 421 (421)
Q Consensus 382 ~~~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~~~~~ 421 (421)
..++++||+++++|+.++. .++.++..++++++.-+|
T Consensus 266 -~~~v~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 266 -LASVEYYNPTTDKWTVVSS--CMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp -CCCEEEEETTTTEEEECSS--CCSSCCBSCEEEEEEC--
T ss_pred -cccEEEEcCCCCeEEECCc--ccCcccccceEEEecccC
Confidence 2689999999999999862 446678888888876543
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=329.25 Aligned_cols=278 Identities=19% Similarity=0.243 Sum_probs=228.9
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
..+.+|++||....+++++||+.+++|+.++++|.+ |.+|++++++++|||+||.+ . ...+++++
T Consensus 10 ~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~lyv~GG~~--~--------~~~~~~~~ 74 (306)
T 3ii7_A 10 KHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK-----RRDAACVFWDNVVYILGGSQ--L--------FPIKRMDC 74 (306)
T ss_dssp CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCC-----CBSCEEEEETTEEEEECCBS--S--------SBCCEEEE
T ss_pred ccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcc-----cceeEEEEECCEEEEEeCCC--C--------CCcceEEE
Confidence 346788888865588999999999999999999865 89999999999999999985 1 35789999
Q ss_pred EeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEE
Q 014650 150 FNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGF 229 (421)
Q Consensus 150 yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~ 229 (421)
||+.+++|+.++++|.+|..|++++++ ++|||+||.+ ......+++++||+.+++|+.++++|.+|..|+++
T Consensus 75 ~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~------~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 146 (306)
T 3ii7_A 75 YNVVKDSWYSKLGPPTPRDSLAACAAE--GKIYTSGGSE------VGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV 146 (306)
T ss_dssp EETTTTEEEEEECCSSCCBSCEEEEET--TEEEEECCBB------TTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred EeCCCCeEEECCCCCccccceeEEEEC--CEEEEECCCC------CCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE
Confidence 999999999999999999999999999 9999999975 23456889999999999999999999999988777
Q ss_pred EEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccc------cCeEE
Q 014650 230 VAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSR------IGKIV 303 (421)
Q Consensus 230 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~ 303 (421)
++. ++||++||.+...... ...+++++||+.++ +|+.+++++.+ +.. .++||
T Consensus 147 ~~~--~~iyv~GG~~~~~~~~------~~~~~~~~yd~~~~------------~W~~~~~~p~~--r~~~~~~~~~~~i~ 204 (306)
T 3ii7_A 147 EAN--GLIYVCGGSLGNNVSG------RVLNSCEVYDPATE------------TWTELCPMIEA--RKNHGLVFVKDKIF 204 (306)
T ss_dssp EET--TEEEEECCEESCTTTC------EECCCEEEEETTTT------------EEEEECCCSSC--CBSCEEEEETTEEE
T ss_pred EEC--CEEEEECCCCCCCCcc------cccceEEEeCCCCC------------eEEECCCccch--hhcceEEEECCEEE
Confidence 665 8999999986543210 22455666666665 99999988764 332 37899
Q ss_pred EEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCcccccccccccccee
Q 014650 304 VMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGC 383 (421)
Q Consensus 304 v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~ 383 (421)
++||. ++.. ...++++||+.+++|+.++++|. +|..++++.++++|||+||.++...+
T Consensus 205 v~GG~-~~~~-----~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~~------------- 262 (306)
T 3ii7_A 205 AVGGQ-NGLG-----GLDNVEYYDIKLNEWKMVSPMPW---KGVTVKCAAVGSIVYVLAGFQGVGRL------------- 262 (306)
T ss_dssp EECCE-ETTE-----EBCCEEEEETTTTEEEECCCCSC---CBSCCEEEEETTEEEEEECBCSSSBC-------------
T ss_pred EEeCC-CCCC-----CCceEEEeeCCCCcEEECCCCCC---CccceeEEEECCEEEEEeCcCCCeee-------------
Confidence 99997 3331 23789999999999999998886 56889999999999999998765432
Q ss_pred eEEEEEeCCcceeeEecccCCCCCCCCccceeEE
Q 014650 384 LFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMC 417 (421)
Q Consensus 384 ~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~ 417 (421)
.++++||+++++|+.++.+| .++..++++++
T Consensus 263 ~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~ 293 (306)
T 3ii7_A 263 GHILEYNTETDKWVANSKVR---AFPVTSCLICV 293 (306)
T ss_dssp CEEEEEETTTTEEEEEEEEE---CCSCTTCEEEE
T ss_pred eeEEEEcCCCCeEEeCCCcc---cccceeEEEEE
Confidence 68999999999999987665 45566666654
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.8e-43 Score=329.00 Aligned_cols=279 Identities=21% Similarity=0.322 Sum_probs=227.4
Q ss_pred ccCCceEEEeCC--CCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCC
Q 014650 68 NSQSDLLCIFPQ--DPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 68 ~~~~~~~~~~g~--~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
...++.||++|| ....+++++||+.+++|..++++|.+ |.+|++++.+++|||+||...... .....+
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~lyv~GG~~~~~~-----~~~~~~ 90 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP-----RSGLAGCVVGGLLYAVGGRNNSPD-----GNTDSS 90 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC-----CBSCEEEEETTEEEEECCEEEETT-----EEEECC
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc-----cccceEEEECCEEEEECCCcCCCC-----CCeecc
Confidence 445677888888 34677899999999999999999865 899999999999999999842100 012568
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAG 225 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 225 (421)
++++||+.+++|+++++||.+|..|++++++ ++||++||.+ .....+++++||+.+++|+.++++|.+|..
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~-------~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 161 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGVID--GHIYAVGGSH-------GCIHHNSVERYEPERDEWHLVAPMLTRRIG 161 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEEET--TEEEEECCEE-------TTEECCCEEEEETTTTEEEECCCCSSCCBS
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEEEC--CEEEEEcCCC-------CCcccccEEEECCCCCeEeECCCCCccccc
Confidence 8999999999999999999999999999999 9999999975 234578899999999999999999999998
Q ss_pred eeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccc------c
Q 014650 226 CVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSR------I 299 (421)
Q Consensus 226 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~ 299 (421)
|+++++. ++||++||.++.. ..+++++||+.++ +|+.+++++.+ |.. .
T Consensus 162 ~~~~~~~--~~iyv~GG~~~~~----------~~~~~~~yd~~~~------------~W~~~~~~p~~--r~~~~~~~~~ 215 (308)
T 1zgk_A 162 VGVAVLN--RLLYAVGGFDGTN----------RLNSAECYYPERN------------EWRMITAMNTI--RSGAGVCVLH 215 (308)
T ss_dssp CEEEEET--TEEEEECCBCSSC----------BCCCEEEEETTTT------------EEEECCCCSSC--CBSCEEEEET
T ss_pred eEEEEEC--CEEEEEeCCCCCC----------cCceEEEEeCCCC------------eEeeCCCCCCc--cccceEEEEC
Confidence 8777764 8999999987653 2344566666555 99999988764 332 3
Q ss_pred CeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccc
Q 014650 300 GKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHK 379 (421)
Q Consensus 300 g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 379 (421)
++||++||. ++.. ...++++||+.+++|+++.++|. +|..++++.++++|||+||.++...
T Consensus 216 ~~iyv~GG~-~~~~-----~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~---------- 276 (308)
T 1zgk_A 216 NCIYAAGGY-DGQD-----QLNSVERYDVETETWTFVAPMKH---RRSALGITVHQGRIYVLGGYDGHTF---------- 276 (308)
T ss_dssp TEEEEECCB-CSSS-----BCCCEEEEETTTTEEEECCCCSS---CCBSCEEEEETTEEEEECCBCSSCB----------
T ss_pred CEEEEEeCC-CCCC-----ccceEEEEeCCCCcEEECCCCCC---CccceEEEEECCEEEEEcCcCCCcc----------
Confidence 799999997 3332 24789999999999999998886 5688999999999999999875442
Q ss_pred cceeeEEEEEeCCcceeeEecccCCCCCCCCccceeE
Q 014650 380 RAGCLFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIM 416 (421)
Q Consensus 380 ~~~~~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~ 416 (421)
..++++||+++++|+.++.+ +.++..+++++
T Consensus 277 ---~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~ 307 (308)
T 1zgk_A 277 ---LDSVECYDPDTDTWSEVTRM---TSGRSGVGVAV 307 (308)
T ss_dssp ---CCEEEEEETTTTEEEEEEEC---SSCCBSCEEEE
T ss_pred ---cceEEEEcCCCCEEeecCCC---CCCcccceeEe
Confidence 36899999999999998755 45566666665
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=320.24 Aligned_cols=276 Identities=22% Similarity=0.336 Sum_probs=226.4
Q ss_pred CCceEEEeCC-C---CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCC
Q 014650 70 QSDLLCIFPQ-D---PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 70 ~~~~~~~~g~-~---~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
.++.+|++|| . ...+++++||+.+++|..++++|.+ |.+|+++..+++|||+||.... ...+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~~~~~~~l~v~GG~~~~---------~~~~ 78 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRK-----RRYVASVSLHDRIYVIGGYDGR---------SRLS 78 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSC-----CBSCEEEEETTEEEEECCBCSS---------CBCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChh-----hccccEEEECCEEEEEcCCCCC---------ccCc
Confidence 4667888888 2 3577899999999999999998865 8999999999999999998532 2578
Q ss_pred eEEEEeCccCc---eeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 146 SAFRFNFLTFS---WERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 146 ~v~~yd~~t~~---W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
++++||+.+++ |+.++++|.+|..|++++++ ++||++||.. .....+++++||+.+++|+.++++|.+
T Consensus 79 ~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~--~~lyv~GG~~-------~~~~~~~~~~~d~~~~~W~~~~~~p~~ 149 (301)
T 2vpj_A 79 SVECLDYTADEDGVWYSVAPMNVRRGLAGATTLG--DMIYVSGGFD-------GSRRHTSMERYDPNIDQWSMLGDMQTA 149 (301)
T ss_dssp CEEEEETTCCTTCCCEEECCCSSCCBSCEEEEET--TEEEEECCBC-------SSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred eEEEEECCCCCCCeeEECCCCCCCccceeEEEEC--CEEEEEcccC-------CCcccceEEEEcCCCCeEEECCCCCCC
Confidence 99999999999 99999999999999999999 9999999986 234578999999999999999999999
Q ss_pred CCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccc----cc
Q 014650 223 RAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWER----SR 298 (421)
Q Consensus 223 r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~----~~ 298 (421)
|..|+++++. ++||++||.++.. ..+++++||+.++ +|+.+++++.+... ..
T Consensus 150 r~~~~~~~~~--~~iyv~GG~~~~~----------~~~~~~~~d~~~~------------~W~~~~~~p~~r~~~~~~~~ 205 (301)
T 2vpj_A 150 REGAGLVVAS--GVIYCLGGYDGLN----------ILNSVEKYDPHTG------------HWTNVTPMATKRSGAGVALL 205 (301)
T ss_dssp CBSCEEEEET--TEEEEECCBCSSC----------BCCCEEEEETTTT------------EEEEECCCSSCCBSCEEEEE
T ss_pred cccceEEEEC--CEEEEECCCCCCc----------ccceEEEEeCCCC------------cEEeCCCCCcccccceEEEE
Confidence 9888777764 8999999987642 3344566666655 99999988764211 12
Q ss_pred cCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCcccccccccc
Q 014650 299 IGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQH 378 (421)
Q Consensus 299 ~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 378 (421)
.++||++||. ++.. ..+++++||+.+++|+.++++|. +|..++++.++++|||+||.++...
T Consensus 206 ~~~i~v~GG~-~~~~-----~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~--------- 267 (301)
T 2vpj_A 206 NDHIYVVGGF-DGTA-----HLSSVEAYNIRTDSWTTVTSMTT---PRCYVGATVLRGRLYAIAGYDGNSL--------- 267 (301)
T ss_dssp TTEEEEECCB-CSSS-----BCCCEEEEETTTTEEEEECCCSS---CCBSCEEEEETTEEEEECCBCSSSB---------
T ss_pred CCEEEEEeCC-CCCc-----ccceEEEEeCCCCcEEECCCCCC---cccceeEEEECCEEEEEcCcCCCcc---------
Confidence 3799999997 3332 14789999999999999998886 5688999999999999999875442
Q ss_pred ccceeeEEEEEeCCcceeeEecccCCCCCCCCccceeEE
Q 014650 379 KRAGCLFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMC 417 (421)
Q Consensus 379 ~~~~~~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~ 417 (421)
..++++||+++++|+.++.+| .++..++++++
T Consensus 268 ----~~~v~~yd~~~~~W~~~~~~~---~~r~~~~~~~~ 299 (301)
T 2vpj_A 268 ----LSSIECYDPIIDSWEVVTSMG---TQRCDAGVCVL 299 (301)
T ss_dssp ----EEEEEEEETTTTEEEEEEEEE---EEEESCEEEEE
T ss_pred ----cccEEEEcCCCCeEEEcCCCC---cccccceEEEe
Confidence 368999999999999987655 45666666654
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=323.86 Aligned_cols=290 Identities=21% Similarity=0.343 Sum_probs=224.4
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
++.++++|+ +++++|||.+++|+. +++|.| .+|.+|++++.+++|||+||...++.. ......+++++|
T Consensus 4 ~~~l~~~GG----~~~~~yd~~~~~W~~-~~~~~p---~~r~~~~~~~~~~~iyv~GG~~~~~~~---~~~~~~~~~~~~ 72 (315)
T 4asc_A 4 QDLIFMISE----EGAVAYDPAANECYC-ASLSSQ---VPKNHVSLVTKENQVFVAGGLFYNEDN---KEDPMSAYFLQF 72 (315)
T ss_dssp EEEEEEEET----TEEEEEETTTTEEEE-EECCCC---SCSSEEEEECTTCCEEEEEEEEECSSC---SSSCEEEEEEEE
T ss_pred ceEEEEEcC----CceEEECCCCCeEec-CCCCCC---CCccceEEEEECCEEEEEcCcccCCCC---CccccccceEEe
Confidence 467888888 569999999999987 677654 459999999999999999997432110 011234569999
Q ss_pred eCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEE
Q 014650 151 NFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFV 230 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~ 230 (421)
|+.+++|+.+++||.+|..|++++++ ++|||+||.+.. ......+++++||+.+++|+.++++|.+|..|++++
T Consensus 73 d~~~~~W~~~~~~p~~r~~~~~~~~~--~~lyv~GG~~~~----~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 73 DHLDSEWLGMPPLPSPRCLFGLGEAL--NSIYVVGGREIK----DGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp ETTTTEEEECCCBSSCEESCEEEEET--TEEEEECCEESS----TTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred cCCCCeEEECCCCCcchhceeEEEEC--CEEEEEeCCcCC----CCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 99999999999999999999999999 999999997521 235678899999999999999999999999887777
Q ss_pred EccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccc------cCeEEE
Q 014650 231 AEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSR------IGKIVV 304 (421)
Q Consensus 231 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v 304 (421)
+. ++||++||.+... ...+++++||+.++ +|+.+++++.+ |.. .++||+
T Consensus 147 ~~--~~iyv~GG~~~~~---------~~~~~~~~yd~~~~------------~W~~~~~~p~~--r~~~~~~~~~~~iyv 201 (315)
T 4asc_A 147 HM--DLVYVIGGKGSDR---------KCLNKMCVYDPKKF------------EWKELAPMQTA--RSLFGATVHDGRIIV 201 (315)
T ss_dssp ET--TEEEEECCBCTTS---------CBCCCEEEEETTTT------------EEEECCCCSSC--CBSCEEEEETTEEEE
T ss_pred EC--CEEEEEeCCCCCC---------cccceEEEEeCCCC------------eEEECCCCCCc--hhceEEEEECCEEEE
Confidence 65 8999999984432 34455667666665 99999988764 332 379999
Q ss_pred EccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceee
Q 014650 305 MEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCL 384 (421)
Q Consensus 305 ~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 384 (421)
+||. ++... .+.+++||+.+++|+.++++|. +|..++++.++++|||+||.++..... ........+
T Consensus 202 ~GG~-~~~~~-----~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~l~v~GG~~~~~~~~----~~~~~~~~~ 268 (315)
T 4asc_A 202 AAGV-TDTGL-----TSSAEVYSITDNKWAPFEAFPQ---ERSSLSLVSLVGTLYAIGGFATLETES----GELVPTELN 268 (315)
T ss_dssp EEEE-CSSSE-----EEEEEEEETTTTEEEEECCCSS---CCBSCEEEEETTEEEEEEEEEEEECTT----SCEEEEEEE
T ss_pred Eecc-CCCCc-----cceEEEEECCCCeEEECCCCCC---cccceeEEEECCEEEEECCccccCcCC----ccccccccC
Confidence 9997 33321 2689999999999999998886 568899999999999999986421000 000013457
Q ss_pred EEEEEeCCcceeeEecccCCCCCCCCccceeEEEee
Q 014650 385 FIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMCTVR 420 (421)
Q Consensus 385 ~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~~~~ 420 (421)
++++||+++++|+.+. +.++..++++++.-+
T Consensus 269 ~v~~yd~~~~~W~~~~-----~~~r~~~~~~~~~~~ 299 (315)
T 4asc_A 269 DIWRYNEEEKKWEGVL-----REIAYAAGATFLPVR 299 (315)
T ss_dssp EEEEEETTTTEEEEEE-----SCSSCCSSCEEEEEE
T ss_pred cEEEecCCCChhhhhc-----cCCcCccceEEeCCE
Confidence 8999999999999983 333666777766543
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-41 Score=317.32 Aligned_cols=290 Identities=20% Similarity=0.335 Sum_probs=221.9
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
.++.+|++|+. ++++|||.+++|.. ++++.+ .+|.+|+++..+++|||+||...+... ......+.+++
T Consensus 14 ~~~~i~~~GG~----~~~~yd~~~~~W~~-~~~~~~---~~r~~~~~~~~~~~lyv~GG~~~~~~~---~~~~~~~~~~~ 82 (318)
T 2woz_A 14 VKDLILLVNDT----AAVAYDPMENECYL-TALAEQ---IPRNHSSIVTQQNQVYVVGGLYVDEEN---KDQPLQSYFFQ 82 (318)
T ss_dssp EEEEEEEECSS----EEEEEETTTTEEEE-EEECTT---SCSSEEEEECSSSCEEEEESSCC----------CCCBEEEE
T ss_pred ecchhhhcccc----ceEEECCCCCceec-ccCCcc---CCccceEEEEECCEEEEECCcccCccc---cCCCccccEEE
Confidence 45688999884 38999999999998 455543 458999999999999999996422110 00123456999
Q ss_pred EeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEE
Q 014650 150 FNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGF 229 (421)
Q Consensus 150 yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~ 229 (421)
||+.+++|+.+++||.+|..|++++++ ++|||+||.... .....+++++||+.+++|+.++++|.+|..|+++
T Consensus 83 ~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~-----~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 155 (318)
T 2woz_A 83 LDNVSSEWVGLPPLPSARCLFGLGEVD--DKIYVVAGKDLQ-----TEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVI 155 (318)
T ss_dssp EETTTTEEEECSCBSSCBCSCEEEEET--TEEEEEEEEBTT-----TCCEEEEEEEEETTTTEEEEECCCSSCEESCEEE
T ss_pred EeCCCCcEEECCCCCccccccceEEEC--CEEEEEcCccCC-----CCcccceEEEEeCCCCCEeECCCCCCcccccEEE
Confidence 999999999999999999999999999 999999997521 3456889999999999999999999999988777
Q ss_pred EEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccc------cCeEE
Q 014650 230 VAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSR------IGKIV 303 (421)
Q Consensus 230 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~ 303 (421)
+.. ++||++||.+... ...+++++||+.++ +|+.+++++.+ |.. .++||
T Consensus 156 ~~~--~~iyv~GG~~~~~---------~~~~~~~~yd~~~~------------~W~~~~~~p~~--r~~~~~~~~~~~iy 210 (318)
T 2woz_A 156 SHN--GMIYCLGGKTDDK---------KCTNRVFIYNPKKG------------DWKDLAPMKTP--RSMFGVAIHKGKIV 210 (318)
T ss_dssp EET--TEEEEECCEESSS---------CBCCCEEEEETTTT------------EEEEECCCSSC--CBSCEEEEETTEEE
T ss_pred EEC--CEEEEEcCCCCCC---------CccceEEEEcCCCC------------EEEECCCCCCC--cccceEEEECCEEE
Confidence 754 8999999985432 33455667666665 99999988764 332 37999
Q ss_pred EEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCcccccccccccccee
Q 014650 304 VMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGC 383 (421)
Q Consensus 304 v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~ 383 (421)
++||. ++.. ..+.+++||+.+++|+.++++|. +|..++++.++++|||+||.+...... + .......
T Consensus 211 v~GG~-~~~~-----~~~~~~~yd~~~~~W~~~~~~p~---~r~~~~~~~~~~~i~v~GG~~~~~~~~---~-~~~~~~~ 277 (318)
T 2woz_A 211 IAGGV-TEDG-----LSASVEAFDLKTNKWEVMTEFPQ---ERSSISLVSLAGSLYAIGGFAMIQLES---K-EFAPTEV 277 (318)
T ss_dssp EEEEE-ETTE-----EEEEEEEEETTTCCEEECCCCSS---CCBSCEEEEETTEEEEECCBCCBC--------CCBCCBC
T ss_pred EEcCc-CCCC-----ccceEEEEECCCCeEEECCCCCC---cccceEEEEECCEEEEECCeeccCCCC---c-eecccee
Confidence 99997 3322 12689999999999999998887 568899999999999999986532100 0 0001234
Q ss_pred eEEEEEeCCcceeeEecccCCCCCCCCccceeEEEee
Q 014650 384 LFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMCTVR 420 (421)
Q Consensus 384 ~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~~~~ 420 (421)
.++++||+++++|+++ ++.++..++++++.-+
T Consensus 278 ~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~ 309 (318)
T 2woz_A 278 NDIWKYEDDKKEWAGM-----LKEIRYASGASCLATR 309 (318)
T ss_dssp CCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEE
T ss_pred eeEEEEeCCCCEehhh-----cccccccccceeeCCE
Confidence 6899999999999998 2445677777777654
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-37 Score=297.11 Aligned_cols=288 Identities=11% Similarity=0.135 Sum_probs=208.0
Q ss_pred ccCCceEEEeCCCCCCCccEEEeCC--CCcEEECCCCC-CCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCC
Q 014650 68 NSQSDLLCIFPQDPSISSPFLFDAA--NRACRPLPPLP-CNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPS 144 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~d~~--~~~W~~l~~l~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 144 (421)
...+..||++||.. .+++++||+. +++|+.+++|| .+ |.+|++++++++|||+||...... +....+
T Consensus 16 ~~~~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~-----R~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~ 85 (357)
T 2uvk_A 16 AIDNDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGP-----RDQATSAFIDGNLYVFGGIGKNSE----GLTQVF 85 (357)
T ss_dssp EEETTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCC-----CBSCEEEEETTEEEEECCEEECTT----SCEEEC
T ss_pred EEECCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCc-----CccceEEEECCEEEEEcCCCCCCC----ccceee
Confidence 34478899998843 3579999998 49999999999 55 899999999999999999822000 011357
Q ss_pred CeEEEEeCccCceeeccccC-CCccceEEEEEccCCEEEEEcCCccccc------------------------c---CCC
Q 014650 145 DSAFRFNFLTFSWERIAPMI-SPRGSFACAAVRSLNQIIVAGGGSRHSL------------------------F---GAA 196 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~~iyv~GG~~~~~~------------------------~---~~~ 196 (421)
+++++||+.+++|+++++|+ .+|..|++++++ ++|||+||.+.... + ...
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHN--GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEEET--TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEEEC--CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 89999999999999999998 889999999998 99999999753200 0 000
Q ss_pred CCccceEEEEECCCCceEECCCCCCCCCC-eeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCC
Q 014650 197 GSRISSVERYDVAKNEWVSMDEMPRFRAG-CVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDD 275 (421)
Q Consensus 197 ~~~~~~~~~yd~~t~~W~~~~~~~~~r~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~ 275 (421)
...++++++||+.+++|+.++++|.++.. +++++. + ++||++||.+... ...+++++||+
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~-~~iyv~GG~~~~~---------~~~~~v~~~d~-------- 224 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-G-DKTWLINGEAKPG---------LRTDAVFELDF-------- 224 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-T-TEEEEECCEEETT---------EECCCEEEEEC--------
T ss_pred cCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-C-CEEEEEeeecCCC---------cccCceEEEEe--------
Confidence 02468999999999999999999987665 555544 4 8999999976443 23344556653
Q ss_pred CCCCCCCCceEecCccccccccc------cCeEEEEccccC-CCce------EE----EecCCceEEEeCCCCceeEecc
Q 014650 276 HDDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENR-GRPE------VF----MLDKFDILRYDMGLNRWLKETT 338 (421)
Q Consensus 276 ~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~-g~~~------~~----~~~~~~v~~yd~~~~~W~~~~~ 338 (421)
|+++++|+.++.++.+..+.. .++||++||... +... .| ......+++||+.+++|+++++
T Consensus 225 --d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 225 --TGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp --C---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred --cCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 234459999998876433322 278999999621 0000 00 0011478999999999999999
Q ss_pred cCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEecccC
Q 014650 339 IPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIFTKP 403 (421)
Q Consensus 339 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~~p 403 (421)
+|. +|..++++.++++|||+||.++.. ...++|+.|+.++++|.+...+|
T Consensus 303 ~p~---~r~~~~~~~~~~~i~v~GG~~~~~------------~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 303 LSQ---GRAYGVSLPWNNSLLIIGGETAGG------------KAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp CSS---CCBSSEEEEETTEEEEEEEECGGG------------CEEEEEEEEEC-CCSCEEEC---
T ss_pred CCC---CcccceeEEeCCEEEEEeeeCCCC------------CEeeeEEEEEEcCcEeEeeeccc
Confidence 887 468889999999999999987433 33579999999999999987655
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=282.61 Aligned_cols=262 Identities=19% Similarity=0.260 Sum_probs=206.6
Q ss_pred hhHHHHhhhHhHHhhhcCCcccccccccccCCceEEEeCCC---CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEE
Q 014650 40 HQSRLKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQD---PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTS 116 (421)
Q Consensus 40 ~~~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~ 116 (421)
++..+....++|..+...|. .+........++.+|++||. ...+++++||+.+++|+.+++||.+ |..|++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~ 104 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPS-RRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR-----RSTLGA 104 (302)
T ss_dssp CEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC-----CBSCEE
T ss_pred cEEEEcCcCCcEeEcccCCc-ccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc-----ccceEE
Confidence 34456666778988864443 12222334457889999883 3567899999999999999999965 899999
Q ss_pred EEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCC
Q 014650 117 ISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAA 196 (421)
Q Consensus 117 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 196 (421)
++++++|||+||.+.. ..++++++||+.+++|+.+++||.+|..|++++++ ++||++||.+.. .
T Consensus 105 ~~~~~~iyv~GG~~~~---------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~-----~ 168 (302)
T 2xn4_A 105 AVLNGLLYAVGGFDGS---------TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG--GLLYAVGGYDVA-----S 168 (302)
T ss_dssp EEETTEEEEEEEECSS---------CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEECCEETT-----T
T ss_pred EEECCEEEEEcCCCCC---------ccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC--CEEEEEeCCCCC-----C
Confidence 9999999999998533 24689999999999999999999999999999999 999999998532 2
Q ss_pred CCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCC
Q 014650 197 GSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDH 276 (421)
Q Consensus 197 ~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~ 276 (421)
....+++++||+.+++|+.++++|.+|..|+++++. ++||++||.++.. ..+++++||++++
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~----------~~~~~~~yd~~~~------ 230 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLN--NLLYAVGGHDGPL----------VRKSVEVYDPTTN------ 230 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEECCBSSSS----------BCCCEEEEETTTT------
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEEC--CEEEEECCCCCCc----------ccceEEEEeCCCC------
Confidence 245789999999999999999999999988776665 8999999987542 2344666666655
Q ss_pred CCCCCCCceEecCccccccccc------cCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEec-ccCCCCCCCCce
Q 014650 277 DDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKET-TIPEIRPCKKPL 349 (421)
Q Consensus 277 yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~r~~~ 349 (421)
+|+.++.++.+ |.. .++||++||. ++.. ...++++||+++++|+.++ .|+. +|..+
T Consensus 231 ------~W~~~~~~~~~--r~~~~~~~~~~~i~v~GG~-~~~~-----~~~~v~~yd~~~~~W~~~~~~~~~---~r~~~ 293 (302)
T 2xn4_A 231 ------AWRQVADMNMC--RRNAGVCAVNGLLYVVGGD-DGSC-----NLASVEYYNPTTDKWTVVSSCMST---GRSYA 293 (302)
T ss_dssp ------EEEEECCCSSC--CBSCEEEEETTEEEEECCB-CSSS-----BCCCEEEEETTTTEEEECSSCCSS---CCBSC
T ss_pred ------CEeeCCCCCCc--cccCeEEEECCEEEEECCc-CCCc-----ccccEEEEcCCCCeEEECCcccCc---ccccc
Confidence 99999988764 322 3789999997 3332 2378999999999999997 7776 57889
Q ss_pred EEEEeCCeE
Q 014650 350 GFIVLDGEL 358 (421)
Q Consensus 350 ~~~~~~~~l 358 (421)
++++++++|
T Consensus 294 ~~~~~~~~i 302 (302)
T 2xn4_A 294 GVTVIDKRL 302 (302)
T ss_dssp EEEEEEC--
T ss_pred eEEEecccC
Confidence 999998875
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-36 Score=285.28 Aligned_cols=269 Identities=17% Similarity=0.247 Sum_probs=206.3
Q ss_pred HHHHhhhHhHHhhhcCCcccccccccccCCceEEEeCCCC---------CCCccEEEeCCCCcEEECCCCCCCCCCCCCc
Q 014650 42 SRLKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQDP---------SISSPFLFDAANRACRPLPPLPCNPSTYSLC 112 (421)
Q Consensus 42 ~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~ 112 (421)
..+....++|..........+........++.+|++||.. ..++++.||+.+++|+.+++||.+ |.
T Consensus 27 ~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~ 101 (318)
T 2woz_A 27 VAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-----RC 101 (318)
T ss_dssp EEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-----BC
T ss_pred EEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-----cc
Confidence 4456667788763222112222233455677788888721 122388999999999999999976 89
Q ss_pred ceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 113 NFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 113 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
.|++++++++|||+||...... ..++++++||+.+++|+.++++|.+|..|++++++ ++||++||..
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~~~-------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~---- 168 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQTE-------ASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN--GMIYCLGGKT---- 168 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTTTC-------CEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET--TEEEEECCEE----
T ss_pred ccceEEECCEEEEEcCccCCCC-------cccceEEEEeCCCCCEeECCCCCCcccccEEEEEC--CEEEEEcCCC----
Confidence 9999999999999999863221 35789999999999999999999999999999999 9999999975
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCC
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKK 272 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~ 272 (421)
......+++++||+.+++|+.++++|.+|..|+++++. ++||++||.+.. ...+++++||++++
T Consensus 169 --~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~----------~~~~~~~~yd~~~~-- 232 (318)
T 2woz_A 169 --DDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHK--GKIVIAGGVTED----------GLSASVEAFDLKTN-- 232 (318)
T ss_dssp --SSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEEEEEETT----------EEEEEEEEEETTTC--
T ss_pred --CCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEEC--CEEEEEcCcCCC----------CccceEEEEECCCC--
Confidence 23456889999999999999999999999888776665 899999998664 23445666666665
Q ss_pred cCCCCCCCCCCceEecCccccccccc------cCeEEEEccccCCCc----eEEEecCCceEEEeCCCCceeEecccCCC
Q 014650 273 TDDHDDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRGRP----EVFMLDKFDILRYDMGLNRWLKETTIPEI 342 (421)
Q Consensus 273 ~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g~~----~~~~~~~~~v~~yd~~~~~W~~~~~~~~~ 342 (421)
+|+.++++|.+ |.. .++||++||. ++.. ........++++||+++++|+++ ++.
T Consensus 233 ----------~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~- 296 (318)
T 2woz_A 233 ----------KWEVMTEFPQE--RSSISLVSLAGSLYAIGGF-AMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKE- 296 (318)
T ss_dssp ----------CEEECCCCSSC--CBSCEEEEETTEEEEECCB-CCBC----CCBCCBCCCEEEEETTTTEEEEE--ESC-
T ss_pred ----------eEEECCCCCCc--ccceEEEEECCEEEEECCe-eccCCCCceeccceeeeEEEEeCCCCEehhh--ccc-
Confidence 99999988864 332 3799999997 2211 00001247899999999999999 554
Q ss_pred CCCCCceEEEEeCCeEEEEE
Q 014650 343 RPCKKPLGFIVLDGELYVMT 362 (421)
Q Consensus 343 ~~~r~~~~~~~~~~~lyv~G 362 (421)
.|..++++.++++|||+.
T Consensus 297 --~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 297 --IRYASGASCLATRLNLFK 314 (318)
T ss_dssp --CGGGTTCEEEEEEEEGGG
T ss_pred --ccccccceeeCCEEEEEE
Confidence 568889999999999874
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=285.55 Aligned_cols=270 Identities=19% Similarity=0.270 Sum_probs=206.7
Q ss_pred HHHHhhhHhHHhhhcCCc-ccccccccccCCceEEEeCCC-----C----CCCccEEEeCCCCcEEECCCCCCCCCCCCC
Q 014650 42 SRLKQTCRSWFLFFSSRT-LVFDRHKFNSQSDLLCIFPQD-----P----SISSPFLFDAANRACRPLPPLPCNPSTYSL 111 (421)
Q Consensus 42 ~~~~~v~k~W~~l~~~~~-~~~~~~~~~~~~~~~~~~g~~-----~----~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r 111 (421)
..+....++|.. ...+. ..+..+.....++.+|++||. . ..+++++||+.+++|+.++++|.+ |
T Consensus 16 ~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r 89 (315)
T 4asc_A 16 VAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP-----R 89 (315)
T ss_dssp EEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC-----E
T ss_pred EEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc-----h
Confidence 345556777875 33222 122223345567778888872 1 123489999999999999999965 8
Q ss_pred cceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCcccc
Q 014650 112 CNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHS 191 (421)
Q Consensus 112 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~ 191 (421)
.+|++++++++|||+||.+... .....+++++||+.+++|+.++++|.+|..|++++++ ++|||+||..
T Consensus 90 ~~~~~~~~~~~lyv~GG~~~~~------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~--- 158 (315)
T 4asc_A 90 CLFGLGEALNSIYVVGGREIKD------GERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM--DLVYVIGGKG--- 158 (315)
T ss_dssp ESCEEEEETTEEEEECCEESST------TCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--TEEEEECCBC---
T ss_pred hceeEEEECCEEEEEeCCcCCC------CCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC--CEEEEEeCCC---
Confidence 9999999999999999976321 1136789999999999999999999999999999999 9999999974
Q ss_pred ccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccC
Q 014650 192 LFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKK 271 (421)
Q Consensus 192 ~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~ 271 (421)
......+++++||+.+++|+.++++|.+|..|+++++. ++||++||.+... ..+++++||++++
T Consensus 159 ---~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~----------~~~~~~~yd~~~~- 222 (315)
T 4asc_A 159 ---SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHD--GRIIVAAGVTDTG----------LTSSAEVYSITDN- 222 (315)
T ss_dssp ---TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--TEEEEEEEECSSS----------EEEEEEEEETTTT-
T ss_pred ---CCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEEC--CEEEEEeccCCCC----------ccceEEEEECCCC-
Confidence 23466889999999999999999999999988877765 8999999987653 3345666666665
Q ss_pred CcCCCCCCCCCCceEecCccccccccc------cCeEEEEccccCC----CceEEEecCCceEEEeCCCCceeEecccCC
Q 014650 272 KTDDHDDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRG----RPEVFMLDKFDILRYDMGLNRWLKETTIPE 341 (421)
Q Consensus 272 ~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g----~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 341 (421)
+|+.+++++.+ |.. .++||++||.. + .........+++++||+++++|+.+ ++.
T Consensus 223 -----------~W~~~~~~p~~--r~~~~~~~~~~~l~v~GG~~-~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~ 286 (315)
T 4asc_A 223 -----------KWAPFEAFPQE--RSSLSLVSLVGTLYAIGGFA-TLETESGELVPTELNDIWRYNEEEKKWEGV--LRE 286 (315)
T ss_dssp -----------EEEEECCCSSC--CBSCEEEEETTEEEEEEEEE-EEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESC
T ss_pred -----------eEEECCCCCCc--ccceeEEEECCEEEEECCcc-ccCcCCccccccccCcEEEecCCCChhhhh--ccC
Confidence 99999988764 332 37999999972 1 1111111236899999999999999 333
Q ss_pred CCCCCCceEEEEeCCeEEEEEe
Q 014650 342 IRPCKKPLGFIVLDGELYVMTV 363 (421)
Q Consensus 342 ~~~~r~~~~~~~~~~~lyv~GG 363 (421)
+|..+++++++++||++..
T Consensus 287 ---~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 287 ---IAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ---SSCCSSCEEEEEEECGGGS
T ss_pred ---CcCccceEEeCCEEEEEEe
Confidence 4678889999999999864
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.4e-36 Score=279.45 Aligned_cols=258 Identities=21% Similarity=0.287 Sum_probs=206.3
Q ss_pred cchhHHHHhhhHhHHhhhcCCcccccccccccCCceEEEeCCC-------CCCCccEEEeCCCCcEEECCCCCCCCCCCC
Q 014650 38 YSHQSRLKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQD-------PSISSPFLFDAANRACRPLPPLPCNPSTYS 110 (421)
Q Consensus 38 ~~~~~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~ 110 (421)
..++..+....++|..+...|. .+........++.+|++||. ...+++++||+.+++|+.+++||.+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----- 111 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQV-PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP----- 111 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-----
T ss_pred cceEEEEcCCCCeEeECCCCCc-ccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-----
Confidence 3456667777889998854443 22222344557889999884 2467899999999999999999865
Q ss_pred CcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccc
Q 014650 111 LCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRH 190 (421)
Q Consensus 111 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 190 (421)
|..|++++++++|||+||.+.. ..++++++||+.+++|+.++++|.+|..|++++++ ++||++||.+.
T Consensus 112 r~~~~~~~~~~~iyv~GG~~~~---------~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~- 179 (308)
T 1zgk_A 112 RNRIGVGVIDGHIYAVGGSHGC---------IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN--RLLYAVGGFDG- 179 (308)
T ss_dssp CBTCEEEEETTEEEEECCEETT---------EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--TEEEEECCBCS-
T ss_pred ccccEEEEECCEEEEEcCCCCC---------cccccEEEECCCCCeEeECCCCCccccceEEEEEC--CEEEEEeCCCC-
Confidence 8999999999999999998543 24688999999999999999999999999999998 99999999862
Q ss_pred cccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhcc
Q 014650 191 SLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKK 270 (421)
Q Consensus 191 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~ 270 (421)
....+++++||+.+++|+.++++|.+|..++++++. ++||++||.++.. ..+++++||++++
T Consensus 180 ------~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~----------~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 180 ------TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLH--NCIYAAGGYDGQD----------QLNSVERYDVETE 241 (308)
T ss_dssp ------SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET--TEEEEECCBCSSS----------BCCCEEEEETTTT
T ss_pred ------CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEEC--CEEEEEeCCCCCC----------ccceEEEEeCCCC
Confidence 234889999999999999999999999988777664 8999999987543 2345666666665
Q ss_pred CCcCCCCCCCCCCceEecCccccccccc------cCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCC
Q 014650 271 KKTDDHDDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRP 344 (421)
Q Consensus 271 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~ 344 (421)
+|+.+++++.+ |.. .++||++||. ++.. ...++++||+++++|+++++||.
T Consensus 242 ------------~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~-~~~~-----~~~~v~~yd~~~~~W~~~~~~p~--- 298 (308)
T 1zgk_A 242 ------------TWTFVAPMKHR--RSALGITVHQGRIYVLGGY-DGHT-----FLDSVECYDPDTDTWSEVTRMTS--- 298 (308)
T ss_dssp ------------EEEECCCCSSC--CBSCEEEEETTEEEEECCB-CSSC-----BCCEEEEEETTTTEEEEEEECSS---
T ss_pred ------------cEEECCCCCCC--ccceEEEEECCEEEEEcCc-CCCc-----ccceEEEEcCCCCEEeecCCCCC---
Confidence 99999988764 322 3799999997 3332 23789999999999999999987
Q ss_pred CCCceEEEEe
Q 014650 345 CKKPLGFIVL 354 (421)
Q Consensus 345 ~r~~~~~~~~ 354 (421)
+|..++++++
T Consensus 299 ~r~~~~~~~l 308 (308)
T 1zgk_A 299 GRSGVGVAVT 308 (308)
T ss_dssp CCBSCEEEEC
T ss_pred CcccceeEeC
Confidence 4678877653
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=278.69 Aligned_cols=264 Identities=16% Similarity=0.177 Sum_probs=207.4
Q ss_pred chhHHHHhhhHhHHhhhcCCcccccccccccCCceEEEeCCC--CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEE
Q 014650 39 SHQSRLKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQD--PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTS 116 (421)
Q Consensus 39 ~~~~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~ 116 (421)
.++..+....++|..+...|. .+........++.+|++||. ...+++++||+.+++|+.++++|.+ |.+|++
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-----r~~~~~ 97 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFE-KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP-----RDSLAA 97 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSC-CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC-----CBSCEE
T ss_pred ceEEEecCCCCCEecCCCCCc-ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc-----ccceeE
Confidence 445566777888998865543 22222344557789999884 3567899999999999999999865 899999
Q ss_pred EEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCC
Q 014650 117 ISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAA 196 (421)
Q Consensus 117 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 196 (421)
++++++|||+||.+... ..++++++||+.+++|+.+++||.+|..|++++++ ++||++||..... ..
T Consensus 98 ~~~~~~iyv~GG~~~~~--------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~---~~ 164 (306)
T 3ii7_A 98 CAAEGKIYTSGGSEVGN--------SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEAN--GLIYVCGGSLGNN---VS 164 (306)
T ss_dssp EEETTEEEEECCBBTTB--------SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEECCEESCT---TT
T ss_pred EEECCEEEEECCCCCCC--------cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEEC--CEEEEECCCCCCC---Cc
Confidence 99999999999985322 35789999999999999999999999999999999 9999999975320 01
Q ss_pred CCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCC
Q 014650 197 GSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDH 276 (421)
Q Consensus 197 ~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~ 276 (421)
....+++++||+++++|+.++++|.+|..|+++++. ++||++||.+... ..+++++||+.++
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--~~i~v~GG~~~~~----------~~~~~~~yd~~~~------ 226 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVK--DKIFAVGGQNGLG----------GLDNVEYYDIKLN------ 226 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEECCEETTE----------EBCCEEEEETTTT------
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEEC--CEEEEEeCCCCCC----------CCceEEEeeCCCC------
Confidence 123889999999999999999999999988777764 8999999986642 3445666666665
Q ss_pred CCCCCCCceEecCccccccccc------cCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceE
Q 014650 277 DDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLG 350 (421)
Q Consensus 277 yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~ 350 (421)
+|+.+++++.+ +.. .++||++||. ++.. ...++++||+++++|+.+++||. +|.+++
T Consensus 227 ------~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~-~~~~-----~~~~~~~yd~~~~~W~~~~~~~~---~r~~~~ 289 (306)
T 3ii7_A 227 ------EWKMVSPMPWK--GVTVKCAAVGSIVYVLAGF-QGVG-----RLGHILEYNTETDKWVANSKVRA---FPVTSC 289 (306)
T ss_dssp ------EEEECCCCSCC--BSCCEEEEETTEEEEEECB-CSSS-----BCCEEEEEETTTTEEEEEEEEEC---CSCTTC
T ss_pred ------cEEECCCCCCC--ccceeEEEECCEEEEEeCc-CCCe-----eeeeEEEEcCCCCeEEeCCCccc---ccceeE
Confidence 99999988863 332 3789999997 3332 23689999999999999999986 457777
Q ss_pred EEEeCC
Q 014650 351 FIVLDG 356 (421)
Q Consensus 351 ~~~~~~ 356 (421)
++.+.+
T Consensus 290 ~~~~~~ 295 (306)
T 3ii7_A 290 LICVVD 295 (306)
T ss_dssp EEEEEE
T ss_pred EEEECC
Confidence 766554
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=275.40 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=205.7
Q ss_pred chhHHHHhhhHhHHhhhcCCcccccccccccCCceEEEeCCC---CCCCccEEEeCCCCc---EEECCCCCCCCCCCCCc
Q 014650 39 SHQSRLKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQD---PSISSPFLFDAANRA---CRPLPPLPCNPSTYSLC 112 (421)
Q Consensus 39 ~~~~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~d~~~~~---W~~l~~l~~~~~~~~r~ 112 (421)
.++..+....++|..+...|. .+........++.+|++||. ...+++++||+.+++ |+.++++|.+ |.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-----r~ 104 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITR-KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-----RG 104 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-----CB
T ss_pred eEEEEEcCCCCeEEeCCCCCh-hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-----cc
Confidence 345556667888988875444 22222334456788998883 356789999999999 9999999865 89
Q ss_pred ceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 113 NFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 113 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
.|+++..+++|||+||.... ..++++++||+.+++|+.++++|.+|..|++++++ ++||++||.+
T Consensus 105 ~~~~~~~~~~lyv~GG~~~~---------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~---- 169 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDGS---------RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS--GVIYCLGGYD---- 169 (301)
T ss_dssp SCEEEEETTEEEEECCBCSS---------CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET--TEEEEECCBC----
T ss_pred ceeEEEECCEEEEEcccCCC---------cccceEEEEcCCCCeEEECCCCCCCcccceEEEEC--CEEEEECCCC----
Confidence 99999999999999998633 24789999999999999999999999999999999 9999999975
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCC
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKK 272 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~ 272 (421)
.....+++++||+.+++|+.++++|.+|..|++++.. ++||++||.+... ..+++++||++++
T Consensus 170 ---~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~i~v~GG~~~~~----------~~~~v~~yd~~~~-- 232 (301)
T 2vpj_A 170 ---GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLN--DHIYVVGGFDGTA----------HLSSVEAYNIRTD-- 232 (301)
T ss_dssp ---SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET--TEEEEECCBCSSS----------BCCCEEEEETTTT--
T ss_pred ---CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEEC--CEEEEEeCCCCCc----------ccceEEEEeCCCC--
Confidence 2346889999999999999999999999888777665 8999999987643 2344566666665
Q ss_pred cCCCCCCCCCCceEecCccccccccc------cCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCC
Q 014650 273 TDDHDDGDRGTWREVGDMWDEWERSR------IGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCK 346 (421)
Q Consensus 273 ~~~~yd~~~~~W~~~~~~~~~~~~~~------~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r 346 (421)
+|+.++.++.+ +.. .++||++||. ++.. ....+++||+++++|+.+++||. +|
T Consensus 233 ----------~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~-~~~~-----~~~~v~~yd~~~~~W~~~~~~~~---~r 291 (301)
T 2vpj_A 233 ----------SWTTVTSMTTP--RCYVGATVLRGRLYAIAGY-DGNS-----LLSSIECYDPIIDSWEVVTSMGT---QR 291 (301)
T ss_dssp ----------EEEEECCCSSC--CBSCEEEEETTEEEEECCB-CSSS-----BEEEEEEEETTTTEEEEEEEEEE---EE
T ss_pred ----------cEEECCCCCCc--ccceeEEEECCEEEEEcCc-CCCc-----ccccEEEEcCCCCeEEEcCCCCc---cc
Confidence 99999988764 322 2789999997 3332 12689999999999999999987 45
Q ss_pred CceEEEEeC
Q 014650 347 KPLGFIVLD 355 (421)
Q Consensus 347 ~~~~~~~~~ 355 (421)
..++++.++
T Consensus 292 ~~~~~~~~~ 300 (301)
T 2vpj_A 292 CDAGVCVLR 300 (301)
T ss_dssp ESCEEEEEE
T ss_pred ccceEEEeC
Confidence 788887764
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.4e-35 Score=279.83 Aligned_cols=275 Identities=16% Similarity=0.162 Sum_probs=190.2
Q ss_pred ECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCc--cCceeeccccC-CCccceEEEE
Q 014650 98 PLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFL--TFSWERIAPMI-SPRGSFACAA 174 (421)
Q Consensus 98 ~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~--t~~W~~~~~~~-~~r~~~~~~~ 174 (421)
.+++||.+ |.++++++++++|||+||.. .+++++||+. +++|+.+++|| .+|..|++++
T Consensus 2 ~l~~lP~~-----r~~~~~~~~~~~iyv~GG~~-------------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~ 63 (357)
T 2uvk_A 2 VLPETPVP-----FKSGTGAIDNDTVYIGLGSA-------------GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF 63 (357)
T ss_dssp CSCCCSSC-----CCSCEEEEETTEEEEECGGG-------------TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE
T ss_pred CCCCCCcc-----ccceEEEEECCEEEEEeCcC-------------CCeEEEEccccCCCCeeECCCCCCCcCccceEEE
Confidence 46788865 88888888899999999974 2479999998 49999999999 8999999999
Q ss_pred EccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC-CCCCCeeEEEEccCCeEEEEeccCCCccccc--
Q 014650 175 VRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP-RFRAGCVGFVAEESGEFWVMGGYGDSRTISG-- 251 (421)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~-- 251 (421)
++ ++|||+||..... ......++++++||+.+++|+.+++|+ .+|..|++++.. ++||++||.+.......
T Consensus 64 ~~--~~lyv~GG~~~~~--~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~~~ 137 (357)
T 2uvk_A 64 ID--GNLYVFGGIGKNS--EGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHN--GKAYVTGGVNQNIFNGYFE 137 (357)
T ss_dssp ET--TEEEEECCEEECT--TSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEET--TEEEEEECCCHHHHHHHHH
T ss_pred EC--CEEEEEcCCCCCC--CccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEEC--CEEEEEeCcCCCcCccccc
Confidence 99 9999999972100 012355889999999999999999998 889888777744 89999999864320000
Q ss_pred -c---------------------ccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccc-c----ccCeEEE
Q 014650 252 -V---------------------LPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWER-S----RIGKIVV 304 (421)
Q Consensus 252 -~---------------------~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~----~~g~i~v 304 (421)
+ .....+.+++++| |+.+++|+.+++++.+... . ..++||+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y------------d~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv 205 (357)
T 2uvk_A 138 DLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF------------DPSTQQWSYAGESPWYGTAGAAVVNKGDKTWL 205 (357)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE------------ETTTTEEEEEEECSSCCCBSCEEEEETTEEEE
T ss_pred chhhcCCcccchhhhhhhhccccccccCCcccEEEE------------eCCCCcEEECCCCCCCCcccccEEEECCEEEE
Confidence 0 0000012334454 5555599999888753111 1 1278999
Q ss_pred EccccCCCceEEEecCCceEEEeC--CCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccc---c-cccc
Q 014650 305 MEDENRGRPEVFMLDKFDILRYDM--GLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETR---R-SQQH 378 (421)
Q Consensus 305 ~GG~~~g~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~---~-~~~~ 378 (421)
+||. ++.. ....+++.||+ .+++|+++.+|+.++ .|..++++.++++|||+||.+........ . +...
T Consensus 206 ~GG~-~~~~----~~~~~v~~~d~d~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 206 INGE-AKPG----LRTDAVFELDFTGNNLKWNKLAPVSSPD-GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp ECCE-EETT----EECCCEEEEECC---CEEEECCCSSTTT-CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred Eeee-cCCC----cccCceEEEEecCCCCcEEecCCCCCCc-ccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 9997 2221 13478888976 999999999987654 56778899999999999997543200000 0 0000
Q ss_pred ccceeeEEEEEeCCcceeeEecccCCCCCCCCccceeEE
Q 014650 379 KRAGCLFIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMC 417 (421)
Q Consensus 379 ~~~~~~~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~ 417 (421)
......++++||+++++|+.++.+| .+|..++++++
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~ 315 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSGELS---QGRAYGVSLPW 315 (357)
T ss_dssp TCCCEECCEEEECC---CEEEEECS---SCCBSSEEEEE
T ss_pred cccceeeEEEEecCCCceeeCCCCC---CCcccceeEEe
Confidence 1123367999999999999987655 45666766654
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=4.5e-32 Score=279.86 Aligned_cols=270 Identities=9% Similarity=0.023 Sum_probs=198.7
Q ss_pred CCceEEEeCCC--CCCCccEEEeCCCCcEEECC-CCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCC
Q 014650 70 QSDLLCIFPQD--PSISSPFLFDAANRACRPLP-PLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPS 144 (421)
Q Consensus 70 ~~~~~~~~g~~--~~~~~~~~~d~~~~~W~~l~-~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~ 144 (421)
.++.+|++||. ...+++++||+.+++|+.++ ++|......+|.+|+++++ +++|||+||.+... ..+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~--------~~~ 467 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPH--------QGL 467 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTT--------CBC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCC--------Ccc
Confidence 56778999884 35678999999999999998 6331111145999999999 99999999986433 257
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEE-ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC---CC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAV-RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE---MP 220 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~ 220 (421)
+++|+||+.+++|+.+++||.+|..|+++++ + ++|||+||.+.. . ++++||+.+++|+.+++ +|
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~--~~iyv~GG~~~~-------~---~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFRHSACSLPD--GNVLILGGVTEG-------P---AMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBSCEEEECTT--SCEEEECCBCSS-------C---SEEEEETTTTEEEECCCSSGGG
T ss_pred ccEEEEeCCCCcEEECCCCCCCcccceEEEEcC--CEEEEECCCCCC-------C---CEEEEECCCCceEEccCCCCCC
Confidence 8999999999999999999999999999997 7 999999998522 1 89999999999999987 89
Q ss_pred CCCCCeeEEEEccC-CeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCC------ceEecCcccc
Q 014650 221 RFRAGCVGFVAEES-GEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGT------WREVGDMWDE 293 (421)
Q Consensus 221 ~~r~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~------W~~~~~~~~~ 293 (421)
.+|..|+++++..+ ++||++||...... ...+++++||+.++ + |+.+..++..
T Consensus 536 ~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--------~~~~~v~~yd~~~~------------~w~~~~~W~~~~~~p~~ 595 (695)
T 2zwa_A 536 QNSLVSAGLEFDPVSKQGIILGGGFMDQT--------TVSDKAIIFKYDAE------------NATEPITVIKKLQHPLF 595 (695)
T ss_dssp GSCCBSCEEEEETTTTEEEEECCBCTTSS--------CBCCEEEEEEECTT------------CSSCCEEEEEEEECGGG
T ss_pred CcccceeEEEEeCCCCEEEEECCcCCCCC--------eeeCcEEEEEccCC------------ccccceEEEEcCCCCCC
Confidence 99998887776644 78999999855431 33455777777766 8 8988775321
Q ss_pred cccc------cc-CeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCC-----CCCCCceEEEEeCC-eEEE
Q 014650 294 WERS------RI-GKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEI-----RPCKKPLGFIVLDG-ELYV 360 (421)
Q Consensus 294 ~~~~------~~-g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-----~~~r~~~~~~~~~~-~lyv 360 (421)
+|. .. ++||++||. ++.... ...+++++||+.+++|+.+. +|.. ...+.+++++.+++ +|||
T Consensus 596 -~R~~~~~~~~~~~~iyv~GG~-~~~~~~--~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v 670 (695)
T 2zwa_A 596 -QRYGSQIKYITPRKLLIVGGT-SPSGLF--DRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHI 670 (695)
T ss_dssp -CCBSCEEEEEETTEEEEECCB-CSSCCC--CTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEE
T ss_pred -CcccceEEEeCCCEEEEECCc-cCCCCC--CCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEE
Confidence 232 23 799999997 322110 12478999999999999653 3221 12456788888776 9999
Q ss_pred EEeecCCCccccccccccccceeeEEEEEeCCc
Q 014650 361 MTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRK 393 (421)
Q Consensus 361 ~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 393 (421)
+||....-.+ +...+.++.+|..+
T Consensus 671 ~GGg~~cfsf---------Gt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 671 IGGGATCYGF---------GSVTNVGLKLIAIA 694 (695)
T ss_dssp ECCEEECTTS---------CEEECCCEEEEECC
T ss_pred EeCCccCcCc---------cccccceEEEEEEc
Confidence 9996432111 12234677777654
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.98 E-value=3.5e-31 Score=273.27 Aligned_cols=241 Identities=12% Similarity=0.111 Sum_probs=183.6
Q ss_pred CcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc-c-----cCCCc
Q 014650 94 RACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA-P-----MISPR 167 (421)
Q Consensus 94 ~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~-~-----~~~~r 167 (421)
.+|...+..|. .|.+++ ++.+++|||+||... ...+++++||+.+++|+.++ + ||.+|
T Consensus 377 ~~~~~~~~~p~-----rr~g~~-~~~~~~iyv~GG~~~----------~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R 440 (695)
T 2zwa_A 377 YQLLECECPIN-----RKFGDV-DVAGNDVFYMGGSNP----------YRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR 440 (695)
T ss_dssp EEEEECCCTTC-----CBSCEE-EECSSCEEEECCBSS----------SBCCCEEEEEECSSCEEEEECCCCCSCCCCCC
T ss_pred eeEeccCCCCC-----CceeEE-EEECCEEEEECCCCC----------CCcCcEEEEECCCCeEEEeccCCCCCCCCccc
Confidence 34555544443 255544 448999999999754 24688999999999999998 6 78999
Q ss_pred cceEEEEE--ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 168 GSFACAAV--RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 168 ~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.+|+++++ + ++|||+||.+. ....++++++||+.+++|+.+++||.+|..|+++++.+ ++|||+||.+.
T Consensus 441 ~~hs~~~~~~~--~~lyv~GG~~~------~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~-~~iyv~GG~~~ 511 (695)
T 2zwa_A 441 MCHTFTTISRN--NQLLLIGGRKA------PHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPD-GNVLILGGVTE 511 (695)
T ss_dssp BSCEEEEETTT--TEEEEECCBSS------TTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTT-SCEEEECCBCS
T ss_pred cceEEEEEccC--CEEEEEcCCCC------CCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcC-CEEEEECCCCC
Confidence 99999999 8 99999999863 23368899999999999999999999999998877644 89999999865
Q ss_pred CccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecC---ccccccccc----c---CeEEEEccccCCCceE
Q 014650 246 SRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGD---MWDEWERSR----I---GKIVVMEDENRGRPEV 315 (421)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~~----~---g~i~v~GG~~~g~~~~ 315 (421)
.. ++++||+.++ +|+.++. +|.+..... . ++||++||.. ....
T Consensus 512 ~~-------------~v~~yd~~t~------------~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~-~~~~- 564 (695)
T 2zwa_A 512 GP-------------AMLLYNVTEE------------IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGF-MDQT- 564 (695)
T ss_dssp SC-------------SEEEEETTTT------------EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBC-TTSS-
T ss_pred CC-------------CEEEEECCCC------------ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcC-CCCC-
Confidence 42 3555555555 9999986 554321111 2 6799999973 2110
Q ss_pred EEecCCceEEEeCCCCc------eeEecccCCCCCCCCceEEEEeC-CeEEEEEeecCCCccccccccccccceeeEEEE
Q 014650 316 FMLDKFDILRYDMGLNR------WLKETTIPEIRPCKKPLGFIVLD-GELYVMTVLKGSDLNETRRSQQHKRAGCLFIQI 388 (421)
Q Consensus 316 ~~~~~~~v~~yd~~~~~------W~~~~~~~~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~ 388 (421)
...+++++||+.+++ |+.+.++|. .+|.+++++.++ ++|||+||.++... ....+++++
T Consensus 565 --~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~--~~R~~~~~~~~~~~~iyv~GG~~~~~~----------~~~~~~v~~ 630 (695)
T 2zwa_A 565 --TVSDKAIIFKYDAENATEPITVIKKLQHPL--FQRYGSQIKYITPRKLLIVGGTSPSGL----------FDRTNSIIS 630 (695)
T ss_dssp --CBCCEEEEEEECTTCSSCCEEEEEEEECGG--GCCBSCEEEEEETTEEEEECCBCSSCC----------CCTTTSEEE
T ss_pred --eeeCcEEEEEccCCccccceEEEEcCCCCC--CCcccceEEEeCCCEEEEECCccCCCC----------CCCCCeEEE
Confidence 123789999999999 899987642 367899999999 99999999865431 012368999
Q ss_pred EeCCcceeeEec
Q 014650 389 YHPRKKTWRYIF 400 (421)
Q Consensus 389 yd~~~~~W~~i~ 400 (421)
||+++++|+.+.
T Consensus 631 yd~~t~~W~~~~ 642 (695)
T 2zwa_A 631 LDPLSETLTSIP 642 (695)
T ss_dssp EETTTTEEEECC
T ss_pred EECCCCeEEEee
Confidence 999999999654
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=6.3e-32 Score=278.24 Aligned_cols=311 Identities=13% Similarity=0.082 Sum_probs=211.5
Q ss_pred HHhhhHhHHhhhcCCcccccccccccCCceEEEeCCCC---------CCCccEEEeCCCCcEEECCCCCCCCCCCCCcce
Q 014650 44 LKQTCRSWFLFFSSRTLVFDRHKFNSQSDLLCIFPQDP---------SISSPFLFDAANRACRPLPPLPCNPSTYSLCNF 114 (421)
Q Consensus 44 ~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~ 114 (421)
+.....+|..+...|.. ..+......+..+|++||.. ..+.+++||+.+++|+.++.|+.+ |..+
T Consensus 171 ~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~-----~~~~ 244 (656)
T 1k3i_A 171 PQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK-----HDMF 244 (656)
T ss_dssp CCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS-----CCCS
T ss_pred CCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC-----CCCc
Confidence 34456788877766551 11111222267788887632 123688999999999999888765 4333
Q ss_pred --EEE-EeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEE-ccCCEEEEEcCCccc
Q 014650 115 --TSI-SLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAV-RSLNQIIVAGGGSRH 190 (421)
Q Consensus 115 --~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~~iyv~GG~~~~ 190 (421)
+++ ..+++||++||.. ..++++||+.+++|+.+++|+.+|..|+++++ + ++|||+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~-------------~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d--g~iyv~GG~~-- 307 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGND-------------AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD--GRVFTIGGSW-- 307 (656)
T ss_dssp SCEEEECTTSCEEEECSSS-------------TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT--SCEEEECCCC--
T ss_pred cccccCCCCCCEEEeCCCC-------------CCceEEecCcCCceeECCCCCccccccceEEecC--CeEEEEeCcc--
Confidence 333 4589999999963 23699999999999999999999999999999 7 9999999953
Q ss_pred cccCCCCCccceEEEEECCCCceEEC-----CCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheeh
Q 014650 191 SLFGAAGSRISSVERYDVAKNEWVSM-----DEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVM 265 (421)
Q Consensus 191 ~~~~~~~~~~~~~~~yd~~t~~W~~~-----~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~y 265 (421)
++....+++|+||+++++|+.+ .+|+..+.. +++..+ +++|++||.++..... ...+.++.|
T Consensus 308 ----~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~--~~~~~~-~~iyv~Gg~~g~~~~~------~~~~~v~~y 374 (656)
T 1k3i_A 308 ----SGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ--GLYRSD-NHAWLFGWKKGSVFQA------GPSTAMNWY 374 (656)
T ss_dssp ----CSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT--GGGTTT-CSCCEEECGGGCEEEC------CSSSEEEEE
T ss_pred ----cCCcccccceEeCCCCCcceeCCCcccccccccccc--ceeecC-CceEEEECCCCcEEEe------cCccceeee
Confidence 2344678999999999999997 445555532 333344 8999999987643110 012234444
Q ss_pred hhhccCCcCCCCCCCCCCceEecCcccc----------ccc----cccCeEEEEcccc--CCCceEEEecCCceEEEeCC
Q 014650 266 QLKKKKKTDDHDDGDRGTWREVGDMWDE----------WER----SRIGKIVVMEDEN--RGRPEVFMLDKFDILRYDMG 329 (421)
Q Consensus 266 d~~~~~~~~~~yd~~~~~W~~~~~~~~~----------~~~----~~~g~i~v~GG~~--~g~~~~~~~~~~~v~~yd~~ 329 (421)
|+++++|......... ... ...++||++||.. ++.... -....+++||+.
T Consensus 375 ------------d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~--~~~~~v~~yd~~ 440 (656)
T 1k3i_A 375 ------------YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT--TNAHIITLGEPG 440 (656)
T ss_dssp ------------ECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC--CCEEEEECCSTT
T ss_pred ------------ecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC--CcceEEEcCCCC
Confidence 5555598754322110 011 1248999999962 111110 011268899999
Q ss_pred CCceeEec--ccCCCCCCCCceEEEEe-CCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEecccCCCC
Q 014650 330 LNRWLKET--TIPEIRPCKKPLGFIVL-DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIFTKPPFP 406 (421)
Q Consensus 330 ~~~W~~~~--~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~~p~~~ 406 (421)
+++|+++. .||. +|..++++.+ +++|||+||.+..... .......++++||+++++|+.++. ++
T Consensus 441 ~~~W~~~~~~~mp~---~R~~~~~~~l~~g~i~v~GG~~~~~~~-------~~~~~~~~v~~ydp~t~~W~~~~~---~~ 507 (656)
T 1k3i_A 441 TSPNTVFASNGLYF---ARTFHTSVVLPDGSTFITGGQRRGIPF-------EDSTPVFTPEIYVPEQDTFYKQNP---NS 507 (656)
T ss_dssp SCCEEEECTTCCSS---CCBSCEEEECTTSCEEEECCBSBCCTT-------CCCSBCCCCEEEEGGGTEEEECCC---CS
T ss_pred CCCeeEEccCCCCC---CcccCCeEECCCCCEEEECCcccCcCc-------CCCCcccceEEEcCCCCceeecCC---CC
Confidence 99999986 7776 5678887777 9999999997632110 012334689999999999999764 45
Q ss_pred CCCCccceeEE
Q 014650 407 QPLDFGTAIMC 417 (421)
Q Consensus 407 ~~~~~~~~~~~ 417 (421)
.+|..|+++++
T Consensus 508 ~~R~~hs~a~l 518 (656)
T 1k3i_A 508 IVRVYHSISLL 518 (656)
T ss_dssp SCCCTTEEEEE
T ss_pred CccccccHhhc
Confidence 67788876654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=6.2e-29 Score=255.95 Aligned_cols=278 Identities=13% Similarity=0.093 Sum_probs=188.9
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
++..|||.+++|..++++| +..++++++ +++||++||...+... ........+++||+.+++|+.+++
T Consensus 167 ~~~~~dp~~~~W~~~~~~P-------~~~~~~av~~~~g~l~v~GG~~~~~~~---~~~~~~~~~~~yd~~t~~w~~~~~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLP-------IVPAAAAIEPTSGRVLMWSSYRNDAFG---GSPGGITLTSSWDPSTGIVSDRTV 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEECS-------SCCSEEEEETTTTEEEEEEECCCTTTC---SCCCSEEEEEEECTTTCCBCCCEE
T ss_pred ccccCCCCCCeeeeeccCC-------CCceeEEEEecCCEEEEEecccccccc---cCCCCeEEEEEEeCCCCcEEeCcc
Confidence 3778999999999998887 344555555 9999999997643210 011234579999999999999999
Q ss_pred cCCCccceE--EEE-EccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEE
Q 014650 163 MISPRGSFA--CAA-VRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWV 239 (421)
Q Consensus 163 ~~~~r~~~~--~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv 239 (421)
|+.+|..|+ +++ .+ ++||++||... .++++||+.+++|+.+++|+.+|..|+++++.+ ++|||
T Consensus 237 ~~~~~~~~~~~~~~~~~--g~lyv~GG~~~-----------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d-g~iyv 302 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGN--GQIVVTGGNDA-----------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD-GRVFT 302 (656)
T ss_dssp EECSCCCSSCEEEECTT--SCEEEECSSST-----------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT-SCEEE
T ss_pred cCCCCCCccccccCCCC--CCEEEeCCCCC-----------CceEEecCcCCceeECCCCCccccccceEEecC-CeEEE
Confidence 988876553 444 45 99999999741 269999999999999999999999887777745 89999
Q ss_pred EeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEec-----Ccccccc---ccccCeEEEEccccCC
Q 014650 240 MGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVG-----DMWDEWE---RSRIGKIVVMEDENRG 311 (421)
Q Consensus 240 ~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~---~~~~g~i~v~GG~~~g 311 (421)
+||..... ...+++++||+.+ ++|+.++ +|+.... ....+++|++||. +|
T Consensus 303 ~GG~~~~~---------~~~~~~e~yd~~t------------~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~-~g 360 (656)
T 1k3i_A 303 IGGSWSGG---------VFEKNGEVYSPSS------------KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWK-KG 360 (656)
T ss_dssp ECCCCCSS---------SCCCCEEEEETTT------------TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECG-GG
T ss_pred EeCcccCC---------cccccceEeCCCC------------CcceeCCCccccccccccccceeecCCceEEEECC-CC
Confidence 99953221 1223344555544 5999984 3332111 1134789999987 44
Q ss_pred CceEEEecCCceEEEeCCCCceeEecccCCC----CCCCCceEEE---EeCCeEEEEEeecCCCccccccccccccceee
Q 014650 312 RPEVFMLDKFDILRYDMGLNRWLKETTIPEI----RPCKKPLGFI---VLDGELYVMTVLKGSDLNETRRSQQHKRAGCL 384 (421)
Q Consensus 312 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----~~~r~~~~~~---~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~ 384 (421)
.. +..-....++.||+.+++|......... ...+..++++ ..+++|||+||.++.... .......
T Consensus 361 ~~-~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~-------~~~~~~~ 432 (656)
T 1k3i_A 361 SV-FQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS-------DATTNAH 432 (656)
T ss_dssp CE-EECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS-------BCCCCEE
T ss_pred cE-EEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC-------CcCCcce
Confidence 31 1112346899999999998864322211 0012333333 358999999997532100 0011223
Q ss_pred EEEEEeCCcceeeEecccCCCCCCCCccceeEE
Q 014650 385 FIQIYHPRKKTWRYIFTKPPFPQPLDFGTAIMC 417 (421)
Q Consensus 385 ~v~~yd~~~~~W~~i~~~p~~~~~~~~~~~~~~ 417 (421)
.+++||+++++|+.+. .+.++.+|.++++++.
T Consensus 433 ~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFA-SNGLYFARTFHTSVVL 464 (656)
T ss_dssp EEECCSTTSCCEEEEC-TTCCSSCCBSCEEEEC
T ss_pred EEEcCCCCCCCeeEEc-cCCCCCCcccCCeEEC
Confidence 7899999999999986 3455677777776654
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.71 E-value=5.2e-06 Score=80.44 Aligned_cols=46 Identities=24% Similarity=0.415 Sum_probs=39.7
Q ss_pred ccCccccCCCChHHHHHHHhcCCCcchhHHHHhhhHhHHhhhcCCc
Q 014650 14 TDETVTLIPGLPNDVASLILAFVPYSHQSRLKQTCRSWFLFFSSRT 59 (421)
Q Consensus 14 ~~~~~~~~~~Lp~dl~~~~l~~lp~~~~~~~~~v~k~W~~l~~~~~ 59 (421)
+....-++..||+|++..||++|+..++.++..|||+|+.+..++.
T Consensus 12 ~~~~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~ 57 (445)
T 2ovr_B 12 PQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNL 57 (445)
T ss_dssp CCCCCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSH
T ss_pred ccccCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchh
Confidence 3344456889999999999999999999999999999999887654
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.55 E-value=6.8e-06 Score=79.47 Aligned_cols=39 Identities=23% Similarity=0.497 Sum_probs=34.7
Q ss_pred CCCChHH----HHHHHhcCCCcchhHHHHhhhHhHHhhhcCCc
Q 014650 21 IPGLPND----VASLILAFVPYSHQSRLKQTCRSWFLFFSSRT 59 (421)
Q Consensus 21 ~~~Lp~d----l~~~~l~~lp~~~~~~~~~v~k~W~~l~~~~~ 59 (421)
+..||+| |+.+||++|+..++.++..|||+|+.++.++.
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~ 53 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGM 53 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTT
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChH
Confidence 4569999 99999999999999999999999998876543
No 21
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.44 E-value=1.8e-07 Score=61.77 Aligned_cols=46 Identities=15% Similarity=0.314 Sum_probs=38.7
Q ss_pred ccccCCCChHHHHHHHhcCCCcchhHHHHhhhHhHHhhhcCCcccc
Q 014650 17 TVTLIPGLPNDVASLILAFVPYSHQSRLKQTCRSWFLFFSSRTLVF 62 (421)
Q Consensus 17 ~~~~~~~Lp~dl~~~~l~~lp~~~~~~~~~v~k~W~~l~~~~~~~~ 62 (421)
+...+..||+|++.+||++++..++.++..|||+|+.+..++.+.+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3456889999999999999999999999999999999999877643
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.40 E-value=9.5e-05 Score=71.73 Aligned_cols=39 Identities=15% Similarity=0.365 Sum_probs=36.1
Q ss_pred ccCCCChHHHHHHHhcCCCcchhHHHHhhhHhHHhhhcC
Q 014650 19 TLIPGLPNDVASLILAFVPYSHQSRLKQTCRSWFLFFSS 57 (421)
Q Consensus 19 ~~~~~Lp~dl~~~~l~~lp~~~~~~~~~v~k~W~~l~~~ 57 (421)
-++..||+|++.+||+.|+..++.++..|||+|+.++.+
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 346679999999999999999999999999999999887
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=97.91 E-value=2.8e-06 Score=76.65 Aligned_cols=49 Identities=18% Similarity=0.320 Sum_probs=44.2
Q ss_pred cccCCCChHHHHHHHhcCCCcchhH-HHHhhhHhHHhhhcCCcccccccc
Q 014650 18 VTLIPGLPNDVASLILAFVPYSHQS-RLKQTCRSWFLFFSSRTLVFDRHK 66 (421)
Q Consensus 18 ~~~~~~Lp~dl~~~~l~~lp~~~~~-~~~~v~k~W~~l~~~~~~~~~~~~ 66 (421)
...+..||+||+.+||++||..++. ++++|||+|+.|+.++.|.+.+..
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~ 97 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQ 97 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhh
Confidence 4568899999999999999999999 999999999999999998775543
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.87 E-value=0.0061 Score=56.25 Aligned_cols=227 Identities=11% Similarity=-0.022 Sum_probs=122.6
Q ss_pred CCccEEEeCCCCcEEECCCC---CCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCce-e
Q 014650 83 ISSPFLFDAANRACRPLPPL---PCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSW-E 158 (421)
Q Consensus 83 ~~~~~~~d~~~~~W~~l~~l---~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W-~ 158 (421)
...+..+|+.+.++..--.. ..+ .+.....++..++++|+.... .+.+.++|+.|.+- .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~---lg~~~~~i~~~~~~lyv~~~~--------------~~~v~viD~~t~~~~~ 78 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFK---LGDVAQSMVIRDGIGWIVVNN--------------SHVIFAIDINTFKEVG 78 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSC---CBSCEEEEEEETTEEEEEEGG--------------GTEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcc---cCccceEEEEECCEEEEEEcC--------------CCEEEEEECcccEEEE
Confidence 45688999999887642100 111 223445677789999999763 35799999998775 3
Q ss_pred eccccCCCccceEEEE-EccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-C--CCCCCCCCCeeEEEEccC
Q 014650 159 RIAPMISPRGSFACAA-VRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-M--DEMPRFRAGCVGFVAEES 234 (421)
Q Consensus 159 ~~~~~~~~r~~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-~--~~~~~~r~~~~~~~~~~~ 234 (421)
+++.... -+.+++ -+ +++||.... ...+.++|+++.+-.. + +..........++++.+
T Consensus 79 ~i~~~~~---p~~i~~~~~--g~lyv~~~~------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~- 140 (328)
T 3dsm_A 79 RITGFTS---PRYIHFLSD--EKAYVTQIW------------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYG- 140 (328)
T ss_dssp EEECCSS---EEEEEEEET--TEEEEEEBS------------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEET-
T ss_pred EcCCCCC---CcEEEEeCC--CeEEEEECC------------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEEC-
Confidence 3433222 233444 45 899998743 2458899999987442 2 22110000111233344
Q ss_pred CeEEEEec-cCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEe---cCccccccccccCeEEEEccccC
Q 014650 235 GEFWVMGG-YGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREV---GDMWDEWERSRIGKIVVMEDENR 310 (421)
Q Consensus 235 ~~iyv~GG-~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~---~~~~~~~~~~~~g~i~v~GG~~~ 310 (421)
+++|+..- .++ .+.++|+.++ +.... ...|........|++|+.... +
T Consensus 141 ~~lyv~~~~~~~---------------~v~viD~~t~------------~~~~~i~~g~~p~~i~~~~dG~l~v~~~~-~ 192 (328)
T 3dsm_A 141 KYVYVNCWSYQN---------------RILKIDTETD------------KVVDELTIGIQPTSLVMDKYNKMWTITDG-G 192 (328)
T ss_dssp TEEEEEECTTCC---------------EEEEEETTTT------------EEEEEEECSSCBCCCEECTTSEEEEEBCC-B
T ss_pred CEEEEEcCCCCC---------------EEEEEECCCC------------eEEEEEEcCCCccceEEcCCCCEEEEECC-C
Confidence 89999852 111 1445666554 43322 111211112234777776532 1
Q ss_pred CCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEe--CCeEEEEEeecCCCccccccccccccceeeEEEE
Q 014650 311 GRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVL--DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQI 388 (421)
Q Consensus 311 g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~ 388 (421)
.....+.-+...|.++|+.+.+....-.++.. ....+++.. ++.||+..+ .|++
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g---~~p~~la~~~d~~~lyv~~~---------------------~v~~ 248 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG---DWPSEVQLNGTRDTLYWINN---------------------DIWR 248 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTT---CCCEEEEECTTSCEEEEESS---------------------SEEE
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCC---CCceeEEEecCCCEEEEEcc---------------------EEEE
Confidence 00000000125789999998876643333321 123444444 567887643 3678
Q ss_pred EeCCccee
Q 014650 389 YHPRKKTW 396 (421)
Q Consensus 389 yd~~~~~W 396 (421)
||+++++.
T Consensus 249 ~d~~t~~~ 256 (328)
T 3dsm_A 249 MPVEADRV 256 (328)
T ss_dssp EETTCSSC
T ss_pred EECCCCce
Confidence 88877765
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.77 E-value=0.0038 Score=57.67 Aligned_cols=241 Identities=12% Similarity=0.056 Sum_probs=121.8
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcE-EECCCCCCCCCCCCCcceEEEE-eCCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRAC-RPLPPLPCNPSTYSLCNFTSIS-LGPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W-~~l~~l~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
..+.+|+.... .+.+..+|+.+.+- ..++... ....++. .+++||+.... ...+
T Consensus 52 ~~~~lyv~~~~--~~~v~viD~~t~~~~~~i~~~~--------~p~~i~~~~~g~lyv~~~~--------------~~~v 107 (328)
T 3dsm_A 52 RDGIGWIVVNN--SHVIFAIDINTFKEVGRITGFT--------SPRYIHFLSDEKAYVTQIW--------------DYRI 107 (328)
T ss_dssp ETTEEEEEEGG--GTEEEEEETTTCCEEEEEECCS--------SEEEEEEEETTEEEEEEBS--------------CSEE
T ss_pred ECCEEEEEEcC--CCEEEEEECcccEEEEEcCCCC--------CCcEEEEeCCCeEEEEECC--------------CCeE
Confidence 34556665542 34588999998776 3343222 2234444 67899998742 2579
Q ss_pred EEEeCccCceeeccccCCC----ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-CCCCCCC
Q 014650 148 FRFNFLTFSWERIAPMISP----RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-MDEMPRF 222 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~----r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~ 222 (421)
.++|+.+.+-...-++... ..-..++..+ +++||..-. ..+.+.++|+++++... ++.-..|
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~--~~lyv~~~~-----------~~~~v~viD~~t~~~~~~i~~g~~p 174 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDMESGSTEQMVQYG--KYVYVNCWS-----------YQNRILKIDTETDKVVDELTIGIQP 174 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCBCCCEEEET--TEEEEEECT-----------TCCEEEEEETTTTEEEEEEECSSCB
T ss_pred EEEECCCCeEEEEEEcCCccccCCCcceEEEEC--CEEEEEcCC-----------CCCEEEEEECCCCeEEEEEEcCCCc
Confidence 9999998875422111110 0223344455 899998531 13468999999987543 2221222
Q ss_pred CCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccccCeE
Q 014650 223 RAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSRIGKI 302 (421)
Q Consensus 223 r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~g~i 302 (421)
. .+.+..++++|+.......... + ..-...+.++|+.++ +....-.++.. . ...-
T Consensus 175 ~----~i~~~~dG~l~v~~~~~~~~~~---~--~~~~~~v~~id~~t~------------~v~~~~~~~~g--~--~p~~ 229 (328)
T 3dsm_A 175 T----SLVMDKYNKMWTITDGGYEGSP---Y--GYEAPSLYRIDAETF------------TVEKQFKFKLG--D--WPSE 229 (328)
T ss_dssp C----CCEECTTSEEEEEBCCBCTTCS---S--CBCCCEEEEEETTTT------------EEEEEEECCTT--C--CCEE
T ss_pred c----ceEEcCCCCEEEEECCCccCCc---c--ccCCceEEEEECCCC------------eEEEEEecCCC--C--Ccee
Confidence 2 2333333888887532211000 0 000122456666554 44322111110 0 0111
Q ss_pred EEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEE--eCCeEEEEEeecCCCcccccccccccc
Q 014650 303 VVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIV--LDGELYVMTVLKGSDLNETRRSQQHKR 380 (421)
Q Consensus 303 ~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~ 380 (421)
+.+... ...+|..+. .|+++|+.+.+.......+.. .....+++. .+++|||....+ .
T Consensus 230 la~~~d---~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~--------------y 289 (328)
T 3dsm_A 230 VQLNGT---RDTLYWINN-DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAID--------------Y 289 (328)
T ss_dssp EEECTT---SCEEEEESS-SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTT--------------S
T ss_pred EEEecC---CCEEEEEcc-EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccc--------------c
Confidence 222210 112555544 788999988775322222210 123445555 368999997211 0
Q ss_pred ceeeEEEEEeCC
Q 014650 381 AGCLFIQIYHPR 392 (421)
Q Consensus 381 ~~~~~v~~yd~~ 392 (421)
.....|.+||++
T Consensus 290 ~~~~~V~v~d~~ 301 (328)
T 3dsm_A 290 QQQGIVYRYSPQ 301 (328)
T ss_dssp SSEEEEEEECTT
T ss_pred ccCCEEEEECCC
Confidence 011579999988
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.39 E-value=0.058 Score=50.35 Aligned_cols=118 Identities=8% Similarity=0.052 Sum_probs=62.0
Q ss_pred ccEEEeCCCCc--EEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeec
Q 014650 85 SPFLFDAANRA--CRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERI 160 (421)
Q Consensus 85 ~~~~~d~~~~~--W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~ 160 (421)
.+++||+.+.+ |+.-...+.. ..+...+.+..++.||+... ...++.+|+.+.+ |+.-
T Consensus 154 ~l~~~d~~tG~~~W~~~~~~~~~---~~~~~~~~~~~~~~v~~g~~---------------~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 154 QLQALNEADGAVKWTVNLDMPSL---SLRGESAPTTAFGAAVVGGD---------------NGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC--------CCCCCCEEETTEEEECCT---------------TTEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEEEeCCCCce---eecCCCCcEEECCEEEEEcC---------------CCEEEEEECCCCcEEEEEe
Confidence 47888887665 7653222210 01122334455777776321 2358899987654 7654
Q ss_pred cccCCCc--------cceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCCCCCCCCCeeEEE
Q 014650 161 APMISPR--------GSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDEMPRFRAGCVGFV 230 (421)
Q Consensus 161 ~~~~~~r--------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~ 230 (421)
...+... .....++.+ +.+|+.+.. ..+..+|+++++ |+.-.. .....+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~p~~~~--~~v~~~~~~-------------g~l~~~d~~tG~~~w~~~~~------~~~~~~ 274 (376)
T 3q7m_A 216 ISQATGSTEIDRLSDVDTTPVVVN--GVVFALAYN-------------GNLTALDLRSGQIMWKRELG------SVNDFI 274 (376)
T ss_dssp CCC-----------CCCCCCEEET--TEEEEECTT-------------SCEEEEETTTCCEEEEECCC------CEEEEE
T ss_pred cccCCCCcccccccccCCCcEEEC--CEEEEEecC-------------cEEEEEECCCCcEEeeccCC------CCCCce
Confidence 3222111 112233456 888876531 247889998875 875321 123344
Q ss_pred EccCCeEEEEec
Q 014650 231 AEESGEFWVMGG 242 (421)
Q Consensus 231 ~~~~~~iyv~GG 242 (421)
..+ +.||+...
T Consensus 275 ~~~-~~l~~~~~ 285 (376)
T 3q7m_A 275 VDG-NRIYLVDQ 285 (376)
T ss_dssp EET-TEEEEEET
T ss_pred EEC-CEEEEEcC
Confidence 444 88888753
No 27
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.39 E-value=0.053 Score=47.41 Aligned_cols=100 Identities=14% Similarity=0.026 Sum_probs=70.4
Q ss_pred ceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 113 NFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 113 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
-++....++.||+-.|... .+.+.++|+.|.+=.+--+++..-++.+++..+ ++||++...
T Consensus 23 tqGL~~~~~~LyestG~~g------------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~--~~ly~ltw~----- 83 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG------------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR--DRLIQLTWR----- 83 (243)
T ss_dssp EEEEEEETTEEEEEECCTT------------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEESS-----
T ss_pred cccEEEECCEEEEECCCCC------------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeC--CEEEEEEee-----
Confidence 3466677899999988632 357999999999876666666666667788888 999999654
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.+.+.+||+++.+-.. .++.+.. .-+++..+ ++||+.-|
T Consensus 84 -------~~~v~v~D~~tl~~~~--ti~~~~~-Gwglt~dg-~~L~vSdg 122 (243)
T 3mbr_X 84 -------NHEGFVYDLATLTPRA--RFRYPGE-GWALTSDD-SHLYMSDG 122 (243)
T ss_dssp -------SSEEEEEETTTTEEEE--EEECSSC-CCEEEECS-SCEEEECS
T ss_pred -------CCEEEEEECCcCcEEE--EEeCCCC-ceEEeeCC-CEEEEECC
Confidence 3568999999876432 2222222 23555554 78999876
No 28
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.36 E-value=0.054 Score=49.58 Aligned_cols=115 Identities=10% Similarity=-0.013 Sum_probs=61.7
Q ss_pred ccCCceEEEeCCCCC----CCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEE-e-CCEEEEEcccccCCCCCCCCCC
Q 014650 68 NSQSDLLCIFPQDPS----ISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSIS-L-GPYIYLLGGSHFDARSFPLDRP 141 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~----~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~ 141 (421)
....+.+|+...... ...++.+|+.+.+-...-+... . .+.++. - ++.+|+.+..
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~-~~~~~~s~dg~~l~v~~~~------------ 109 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL------K-PFGATINNTTQTLWFGNTV------------ 109 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS------C-CCSEEEETTTTEEEEEETT------------
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC------C-cceEEECCCCCEEEEEecC------------
Confidence 345567777654321 3468899998876544322221 1 122232 2 4568887653
Q ss_pred CCCCeEEEEeCccCceeeccccCCCc--------cceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 142 LPSDSAFRFNFLTFSWERIAPMISPR--------GSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 142 ~~~~~v~~yd~~t~~W~~~~~~~~~r--------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
...+++||+.+.+-...-+..... .-+.++...+.+.+|+.+... ...+.+||+.+.+-
T Consensus 110 --~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----------~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 110 --NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----------ESVIWVVDGGNIKL 176 (353)
T ss_dssp --TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----------SCEEEEEETTTTEE
T ss_pred --CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----------CceEEEEcCCCCce
Confidence 247999999887743322222111 112333332215677776321 23588999988764
Q ss_pred E
Q 014650 214 V 214 (421)
Q Consensus 214 ~ 214 (421)
.
T Consensus 177 ~ 177 (353)
T 3vgz_A 177 K 177 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.25 E-value=0.066 Score=49.94 Aligned_cols=221 Identities=10% Similarity=0.115 Sum_probs=112.7
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCc--EEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRA--CRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~--W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
....+|+...+ ..+++||+.+.+ |+.- ++.. ...+.+..++.||+... ...+
T Consensus 102 ~~~~v~v~~~~---g~l~a~d~~tG~~~W~~~--~~~~------~~~~p~~~~~~v~v~~~---------------~g~l 155 (376)
T 3q7m_A 102 SGGHVYIGSEK---AQVYALNTSDGTVAWQTK--VAGE------ALSRPVVSDGLVLIHTS---------------NGQL 155 (376)
T ss_dssp ETTEEEEEETT---SEEEEEETTTCCEEEEEE--CSSC------CCSCCEEETTEEEEECT---------------TSEE
T ss_pred eCCEEEEEcCC---CEEEEEECCCCCEEEEEe--CCCc------eEcCCEEECCEEEEEcC---------------CCeE
Confidence 45566665442 358999988654 6543 2211 11223455788887543 2468
Q ss_pred EEEeCccCc--eeeccccCC--CccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCCCCC
Q 014650 148 FRFNFLTFS--WERIAPMIS--PRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDEMPR 221 (421)
Q Consensus 148 ~~yd~~t~~--W~~~~~~~~--~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~ 221 (421)
+.||+.+.+ |+.-...+. .+.....++.+ +.+|+ |.. ...+..||+++++ |+.-...+.
T Consensus 156 ~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~v~~-g~~------------~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 156 QALNEADGAVKWTVNLDMPSLSLRGESAPTTAF--GAAVV-GGD------------NGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----CCCCCCEEET--TEEEE-CCT------------TTEEEEEETTTCCEEEEEECCC--
T ss_pred EEEECCCCcEEEEEeCCCCceeecCCCCcEEEC--CEEEE-EcC------------CCEEEEEECCCCcEEEEEecccCC
Confidence 999987765 875432221 12223334445 77776 332 1248889998775 875433221
Q ss_pred CC-------CCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccc
Q 014650 222 FR-------AGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEW 294 (421)
Q Consensus 222 ~r-------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~ 294 (421)
.. ......++.+ +.+|+.+. ++ .+.++|..++ .-.|+....... .
T Consensus 221 ~~~~~~~~~~~~~~p~~~~-~~v~~~~~-~g---------------~l~~~d~~tG----------~~~w~~~~~~~~-~ 272 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVN-GVVFALAY-NG---------------NLTALDLRSG----------QIMWKRELGSVN-D 272 (376)
T ss_dssp ---------CCCCCCEEET-TEEEEECT-TS---------------CEEEEETTTC----------CEEEEECCCCEE-E
T ss_pred CCcccccccccCCCcEEEC-CEEEEEec-Cc---------------EEEEEECCCC----------cEEeeccCCCCC-C
Confidence 11 0111222333 77887642 11 1445666554 115765422111 0
Q ss_pred cccccCeEEEEccccCCCceEEEecCCceEEEeCCCCc--eeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCcccc
Q 014650 295 ERSRIGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNR--WLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNET 372 (421)
Q Consensus 295 ~~~~~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 372 (421)
.....+.+|+... ...+..+|+.+.+ |+.-. +.. +...+.+..++.||+... +
T Consensus 273 ~~~~~~~l~~~~~------------~g~l~~~d~~tG~~~w~~~~-~~~----~~~~~~~~~~~~l~v~~~-~------- 327 (376)
T 3q7m_A 273 FIVDGNRIYLVDQ------------NDRVMALTIDGGVTLWTQSD-LLH----RLLTSPVLYNGNLVVGDS-E------- 327 (376)
T ss_dssp EEEETTEEEEEET------------TCCEEEEETTTCCEEEEECT-TTT----SCCCCCEEETTEEEEECT-T-------
T ss_pred ceEECCEEEEEcC------------CCeEEEEECCCCcEEEeecc-cCC----CcccCCEEECCEEEEEeC-C-------
Confidence 1111233333322 2468888887664 66431 111 123345567888887642 2
Q ss_pred ccccccccceeeEEEEEeCCcce
Q 014650 373 RRSQQHKRAGCLFIQIYHPRKKT 395 (421)
Q Consensus 373 ~~~~~~~~~~~~~v~~yd~~~~~ 395 (421)
..+++||+++++
T Consensus 328 -----------g~l~~~d~~tG~ 339 (376)
T 3q7m_A 328 -----------GYLHWINVEDGR 339 (376)
T ss_dssp -----------SEEEEEETTTCC
T ss_pred -----------CeEEEEECCCCc
Confidence 258899988776
No 30
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.17 E-value=0.013 Score=55.75 Aligned_cols=98 Identities=9% Similarity=0.057 Sum_probs=56.9
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
.++.+|+.+.++..+..++.. ....+++.. ++.+++.++. ...+.+||..+.+..+..+.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~--------------~~~i~~~d~~~g~~~~~~~~ 162 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-----FQPKSVRFIDNTRLAIPLLE--------------DEGMDVLDINSGQTVRLSPP 162 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-----SCBCCCEESSSSEEEEEBTT--------------SSSEEEEETTTCCEEEECCC
T ss_pred EEEEECCCCCcceEEEEEcCC-----CCceEEEEeCCCeEEEEeCC--------------CCeEEEEECCCCeEeeecCc
Confidence 578888877766655444332 111122222 6788887763 23589999998776553322
Q ss_pred ---CCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 164 ---ISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 164 ---~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
.........+.+..++.+++.++.+ ..+.+||..+.+-
T Consensus 163 ~~~~~~~~~v~~~~~~~~~~~~~s~~~d------------~~v~~~d~~~~~~ 203 (433)
T 3bws_A 163 EKYKKKLGFVETISIPEHNELWVSQMQA------------NAVHVFDLKTLAY 203 (433)
T ss_dssp HHHHTTCCEEEEEEEGGGTEEEEEEGGG------------TEEEEEETTTCCE
T ss_pred ccccccCCceeEEEEcCCCEEEEEECCC------------CEEEEEECCCceE
Confidence 1222222333442227888887753 3588999988664
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.13 E-value=0.087 Score=46.53 Aligned_cols=99 Identities=8% Similarity=-0.084 Sum_probs=66.6
Q ss_pred eEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCcccccc
Q 014650 114 FTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLF 193 (421)
Q Consensus 114 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~ 193 (421)
.+....++.||+..|... .+.+.++|+.|.+=.+--+++..-+..+++..+ ++||+....
T Consensus 46 qGL~~~~~~LyestG~~g------------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g--~~ly~ltw~------ 105 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG------------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWK--DKIVGLTWK------ 105 (262)
T ss_dssp EEEEEETTEEEEEEEETT------------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEET--TEEEEEESS------
T ss_pred ceEEEECCEEEEECCCCC------------CceEEEEECCCCcEEEEEecCCccceeEEEEeC--CEEEEEEee------
Confidence 455556899999998631 357999999998865554555444556678888 999999654
Q ss_pred CCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 194 GAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 194 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.+.+.+||+++.+-.. .++.+-. ..+++..+ +.||+.-|
T Consensus 106 ------~~~v~v~D~~t~~~~~--ti~~~~e-G~glt~dg-~~L~~SdG 144 (262)
T 3nol_A 106 ------NGLGFVWNIRNLRQVR--SFNYDGE-GWGLTHND-QYLIMSDG 144 (262)
T ss_dssp ------SSEEEEEETTTCCEEE--EEECSSC-CCCEEECS-SCEEECCS
T ss_pred ------CCEEEEEECccCcEEE--EEECCCC-ceEEecCC-CEEEEECC
Confidence 3568999999877432 2222222 23455554 78888766
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.06 E-value=0.023 Score=53.15 Aligned_cols=137 Identities=9% Similarity=0.080 Sum_probs=71.3
Q ss_pred ccCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCC
Q 014650 68 NSQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
....+.+++.+.. ...+..+|..+.+....-..+ ..-.+++.. ++.||+.+.. ..
T Consensus 40 s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~~--------------~~ 96 (391)
T 1l0q_A 40 SPDGTKVYVANAH--SNDVSIIDTATNNVIATVPAG-------SSPQGVAVSPDGKQVYVTNMA--------------SS 96 (391)
T ss_dssp CTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEETT--------------TT
T ss_pred CCCCCEEEEECCC--CCeEEEEECCCCeEEEEEECC-------CCccceEECCCCCEEEEEECC--------------CC
Confidence 3455666665532 235888999887765432222 111233332 4557766542 25
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAG 225 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 225 (421)
.+.+||..+.+-...-.. ...-..++...+...+|+.++.+ ..+.+||..+.+....-.... .
T Consensus 97 ~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~---~ 159 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVGR---S 159 (391)
T ss_dssp EEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEECCS---S
T ss_pred EEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecCC---C
Confidence 699999998765433222 22223333332214577777642 358899998887554322111 1
Q ss_pred eeEEEE-ccCCeEEEEeccC
Q 014650 226 CVGFVA-EESGEFWVMGGYG 244 (421)
Q Consensus 226 ~~~~~~-~~~~~iyv~GG~~ 244 (421)
...+.+ .+++.||+.++.+
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT
T ss_pred cceEEECCCCCEEEEEeCCC
Confidence 123333 2324677776544
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.01 E-value=0.034 Score=51.98 Aligned_cols=133 Identities=14% Similarity=0.137 Sum_probs=68.8
Q ss_pred eEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 73 LLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 73 ~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
.+++.+.. ...+..+|..+++-...-.... .-.+++.. +..||+.++. ...+.+|
T Consensus 3 ~l~vs~~~--d~~v~v~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~~~~~~--------------d~~i~v~ 59 (391)
T 1l0q_A 3 FAYIANSE--SDNISVIDVTSNKVTATIPVGS-------NPMGAVISPDGTKVYVANAH--------------SNDVSII 59 (391)
T ss_dssp EEEEEETT--TTEEEEEETTTTEEEEEEECSS-------SEEEEEECTTSSEEEEEEGG--------------GTEEEEE
T ss_pred EEEEEcCC--CCEEEEEECCCCeEEEEeecCC-------CcceEEECCCCCEEEEECCC--------------CCeEEEE
Confidence 45555542 2458899998876544322221 11233332 3467777754 2468999
Q ss_pred eCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEE
Q 014650 151 NFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFV 230 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~ 230 (421)
|..+.+....-.... .-..++...+...||+.+..+ ..+.+||..+++-...-... . ...++.
T Consensus 60 d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~------------~~v~v~d~~~~~~~~~~~~~--~-~~~~~~ 122 (391)
T 1l0q_A 60 DTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS------------STLSVIDTTSNTVAGTVKTG--K-SPLGLA 122 (391)
T ss_dssp ETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT------------TEEEEEETTTTEEEEEEECS--S-SEEEEE
T ss_pred ECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC------------CEEEEEECCCCeEEEEEeCC--C-CcceEE
Confidence 998876544332222 222233322214577766532 35889999988754332211 1 123333
Q ss_pred Ec-cCCeEEEEeccCC
Q 014650 231 AE-ESGEFWVMGGYGD 245 (421)
Q Consensus 231 ~~-~~~~iyv~GG~~~ 245 (421)
+. +++.||+.++.++
T Consensus 123 ~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 123 LSPDGKKLYVTNNGDK 138 (391)
T ss_dssp ECTTSSEEEEEETTTT
T ss_pred ECCCCCEEEEEeCCCC
Confidence 33 3245777765443
No 34
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.95 E-value=0.19 Score=44.59 Aligned_cols=122 Identities=9% Similarity=0.028 Sum_probs=63.8
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
.++.||+. .+...+. ++.. ...-++++.. ++.||+.... ...+++||+ +.+.......
T Consensus 79 ~i~~~~~~-g~~~~~~-~~~~----~~~~~~i~~~~~g~l~v~~~~--------------~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYT-LPNP----DSAPYGITEGPNGDIWFTEMN--------------GNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp EEEEECTT-SCEEEEE-CSST----TCCEEEEEECTTSCEEEEETT--------------TTEEEEECT-TCCEEEEECS
T ss_pred eEEEECCC-CcEEEEe-CCCc----CCCceeeEECCCCCEEEEecC--------------CceEEEECC-CCCEEEecCC
Confidence 47888886 4554442 2211 1223444444 5788887532 246889998 6555543211
Q ss_pred CCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 164 ISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 164 ~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.....-.+++...+ +++|+.... ...+.+||+ +++..... ++.......++++..++.||+...
T Consensus 138 ~~~~~~~~i~~~~~-g~l~v~~~~------------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 138 NKGSYPSFITLGSD-NALWFTENQ------------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp STTCCEEEEEECTT-SCEEEEETT------------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCCCCCceEEEcCC-CCEEEEeCC------------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEcc
Confidence 11122233343322 788887532 234788998 77665531 111112233455544478888753
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.89 E-value=0.027 Score=49.24 Aligned_cols=134 Identities=13% Similarity=0.074 Sum_probs=87.4
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
..+.+|...|....+.+..+|+.+++=..--+++.. ..+.+++..+++||+.... .+.+++
T Consensus 29 ~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-----~fgeGi~~~~~~ly~ltw~--------------~~~v~v 89 (243)
T 3mbr_X 29 LRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-----YFGAGIVAWRDRLIQLTWR--------------NHEGFV 89 (243)
T ss_dssp ETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEESS--------------SSEEEE
T ss_pred ECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-----cceeEEEEeCCEEEEEEee--------------CCEEEE
Confidence 346788877754456789999999887665555543 3556778889999998653 467999
Q ss_pred EeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE---CCCCCCCCCCe
Q 014650 150 FNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS---MDEMPRFRAGC 226 (421)
Q Consensus 150 yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~---~~~~~~~r~~~ 226 (421)
||+.|.+-. ..++.+-.+.+++..+ +++|+.-|. +.+..+|+++.+-.. +...+.+....
T Consensus 90 ~D~~tl~~~--~ti~~~~~Gwglt~dg--~~L~vSdgs-------------~~l~~iDp~t~~~~~~I~V~~~g~~~~~l 152 (243)
T 3mbr_X 90 YDLATLTPR--ARFRYPGEGWALTSDD--SHLYMSDGT-------------AVIRKLDPDTLQQVGSIKVTAGGRPLDNL 152 (243)
T ss_dssp EETTTTEEE--EEEECSSCCCEEEECS--SCEEEECSS-------------SEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EECCcCcEE--EEEeCCCCceEEeeCC--CEEEEECCC-------------CeEEEEeCCCCeEEEEEEEccCCcccccc
Confidence 999886533 3334444567787766 889998662 358899999976332 22223332222
Q ss_pred eEEEEccCCeEEEE
Q 014650 227 VGFVAEESGEFWVM 240 (421)
Q Consensus 227 ~~~~~~~~~~iyv~ 240 (421)
-...+.+ ++||+-
T Consensus 153 NeLe~~~-G~lyan 165 (243)
T 3mbr_X 153 NELEWVN-GELLAN 165 (243)
T ss_dssp EEEEEET-TEEEEE
T ss_pred eeeEEeC-CEEEEE
Confidence 2233334 788854
No 36
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.87 E-value=0.15 Score=45.32 Aligned_cols=100 Identities=10% Similarity=-0.056 Sum_probs=63.6
Q ss_pred eEEEEeC-CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 114 FTSISLG-PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 114 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
++++..+ +.||+..|.. ..+.+.++|+.|.+=..--+++......+++..+ ++||+....
T Consensus 24 ~Gl~~~~dg~Lyvstg~~------------~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g--~~lyv~t~~----- 84 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY------------GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN--EKLYQVVWL----- 84 (266)
T ss_dssp EEEEECSTTEEEEEECST------------TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET--TEEEEEETT-----
T ss_pred ccEEEeCCCeEEEECCCC------------CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC--CEEEEEEec-----
Confidence 5666655 8999987742 2367999999998865544444333455677777 899999653
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.+.+.+||+++.+=.. .++.+.....++...+ +++|+..|
T Consensus 85 -------~~~v~viD~~t~~v~~--~i~~g~~~g~glt~Dg-~~l~vs~g 124 (266)
T 2iwa_A 85 -------KNIGFIYDRRTLSNIK--NFTHQMKDGWGLATDG-KILYGSDG 124 (266)
T ss_dssp -------CSEEEEEETTTTEEEE--EEECCSSSCCEEEECS-SSEEEECS
T ss_pred -------CCEEEEEECCCCcEEE--EEECCCCCeEEEEECC-CEEEEECC
Confidence 3458999999865322 2221101123455554 78998765
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.84 E-value=0.14 Score=45.18 Aligned_cols=95 Identities=5% Similarity=-0.116 Sum_probs=64.4
Q ss_pred eEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCcccccc
Q 014650 114 FTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLF 193 (421)
Q Consensus 114 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~ 193 (421)
.+....++.||+..|.. ..+.++|+.|.+=.+-- ++..-+..+++..+ ++||++...
T Consensus 58 qGL~~~~~~Ly~stG~~--------------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--~~Ly~ltw~------ 114 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ--------------GTLRQLSLESAQPVWME-RLGNIFAEGLASDG--ERLYQLTWT------ 114 (268)
T ss_dssp EEEEEETTEEEEEETTT--------------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--SCEEEEESS------
T ss_pred ceEEEECCEEEEEcCCC--------------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--CEEEEEEcc------
Confidence 45666689999999852 34899999998855433 55444456677777 999999654
Q ss_pred CCCCCccceEEEEECCCCceEE-CCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 194 GAAGSRISSVERYDVAKNEWVS-MDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 194 ~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.+.+.+||+++.+-.. ++- +.. ..+++..+ +.||+.-|
T Consensus 115 ------~~~v~V~D~~Tl~~~~ti~~---~~e-GwGLt~Dg-~~L~vSdG 153 (268)
T 3nok_A 115 ------EGLLFTWSGMPPQRERTTRY---SGE-GWGLCYWN-GKLVRSDG 153 (268)
T ss_dssp ------SCEEEEEETTTTEEEEEEEC---SSC-CCCEEEET-TEEEEECS
T ss_pred ------CCEEEEEECCcCcEEEEEeC---CCc-eeEEecCC-CEEEEECC
Confidence 3568999999876432 222 221 23455555 78999876
No 38
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.81 E-value=0.51 Score=48.94 Aligned_cols=231 Identities=10% Similarity=0.076 Sum_probs=115.7
Q ss_pred cEEEeCCCCcEEECCCCCCCCC--CCCCcceEEEEe-CCE-EEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc
Q 014650 86 PFLFDAANRACRPLPPLPCNPS--TYSLCNFTSISL-GPY-IYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA 161 (421)
Q Consensus 86 ~~~~d~~~~~W~~l~~l~~~~~--~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 161 (421)
+..||+.++++......+..+. .....-.+++.. ++. |+| |.. ...+++||+.+.+++...
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~--------------~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH--------------AGGLSILHRNSGQVENFN 443 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET--------------TTEEEEEETTTCCEEEEC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC--------------cCceeEEeCCCCcEEEee
Confidence 7788988888877643220000 001122334333 566 775 331 135899999998887765
Q ss_pred ccCC--C-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCC----CCCCCCeeEEEEccC
Q 014650 162 PMIS--P-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEM----PRFRAGCVGFVAEES 234 (421)
Q Consensus 162 ~~~~--~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~----~~~r~~~~~~~~~~~ 234 (421)
.... + ..-.+++... ++.|++... . .+.+||+.+++|+..... ..+.....++....+
T Consensus 444 ~~~~~l~~~~v~~i~~d~-~g~lwigt~-~-------------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~ 508 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDG-EGNLWLGTL-S-------------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSH 508 (795)
T ss_dssp TTTSCCSCSCEEEEEECS-SSCEEEEES-S-------------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTT
T ss_pred cCCCCcCCCeeEEEEECC-CCCEEEEec-C-------------ceeEEeCCCCeEEEccccccccccCCceEEEEEECCC
Confidence 3111 1 1112222222 267766533 1 278899999999887533 111112234444444
Q ss_pred CeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccccCeEEEEccccCCCce
Q 014650 235 GEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSRIGKIVVMEDENRGRPE 314 (421)
Q Consensus 235 ~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~g~i~v~GG~~~g~~~ 314 (421)
+.|++... .+ +.+||+.++ ++ ........ .......+..+-- +....
T Consensus 509 g~lWigt~-~G----------------l~~~~~~~~------------~~-~~~~~~~~-~~l~~~~i~~i~~--d~~g~ 555 (795)
T 4a2l_A 509 KRLWIGGE-EG----------------LSVFKQEGL------------DI-QKASILPV-SNVTKLFTNCIYE--ASNGI 555 (795)
T ss_dssp CCEEEEES-SC----------------EEEEEEETT------------EE-EECCCSCS-CGGGGSCEEEEEE--CTTSC
T ss_pred CCEEEEeC-Cc----------------eEEEeCCCC------------eE-EEecCCCC-CCCCCCeeEEEEE--CCCCC
Confidence 78888543 22 334555443 55 22210000 0000111211110 01111
Q ss_pred EEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEe-CCeEEEEEeecCCCccccccccccccceeeEEEEEeCCc
Q 014650 315 VFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVL-DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRK 393 (421)
Q Consensus 315 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 393 (421)
++.-....+.+||+.+++++....... +......+++.. +|.|++.+. ..+.+||+++
T Consensus 556 lWigT~~Gl~~~d~~~~~~~~~~~~~g-l~~~~i~~i~~d~~g~lWi~t~--------------------~Gl~~~~~~~ 614 (795)
T 4a2l_A 556 IWVGTREGFYCFNEKDKQIKRYNTTNG-LPNNVVYGILEDSFGRLWLSTN--------------------RGISCFNPET 614 (795)
T ss_dssp EEEEESSCEEEEETTTTEEEEECGGGT-CSCSCEEEEEECTTSCEEEEET--------------------TEEEEEETTT
T ss_pred EEEEeCCCceeECCCCCcEEEeCCCCC-CchhheEEEEECCCCCEEEEcC--------------------CceEEEcCCC
Confidence 443333578999999998887643221 111122344333 477887763 2577888888
Q ss_pred ceeeEec
Q 014650 394 KTWRYIF 400 (421)
Q Consensus 394 ~~W~~i~ 400 (421)
++++...
T Consensus 615 ~~~~~~~ 621 (795)
T 4a2l_A 615 EKFRNFT 621 (795)
T ss_dssp TEEEEEC
T ss_pred CcEEEcC
Confidence 8887664
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.74 E-value=0.11 Score=47.89 Aligned_cols=145 Identities=9% Similarity=0.142 Sum_probs=72.7
Q ss_pred cCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 69 SQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
...+++++.+.+ ..+..||..+.++..+..+... . ..-.+++.. ++..++.|+.+ ..+
T Consensus 18 ~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~h---~-~~v~~~~~~~~~~~l~~~~~d--------------g~i 76 (372)
T 1k8k_C 18 KDRTQIAICPNN---HEVHIYEKSGNKWVQVHELKEH---N-GQVTGVDWAPDSNRIVTCGTD--------------RNA 76 (372)
T ss_dssp TTSSEEEEECSS---SEEEEEEEETTEEEEEEEEECC---S-SCEEEEEEETTTTEEEEEETT--------------SCE
T ss_pred CCCCEEEEEeCC---CEEEEEeCCCCcEEeeeeecCC---C-CcccEEEEeCCCCEEEEEcCC--------------CeE
Confidence 344555554443 3578899888876555444321 0 111222222 55666666642 358
Q ss_pred EEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc-eEECCCCCCC-CCC
Q 014650 148 FRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE-WVSMDEMPRF-RAG 225 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~-r~~ 225 (421)
.+||..+.++.....+........++.+..++..+++|+.+ ..+.+||..+.. |........+ ...
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~v~i~d~~~~~~~~~~~~~~~~~~~~ 144 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS------------RVISICYFEQENDWWVCKHIKKPIRST 144 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT------------SSEEEEEEETTTTEEEEEEECTTCCSC
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC------------CEEEEEEecCCCcceeeeeeecccCCC
Confidence 88998888766544332222223333332226666666643 236667766654 3322222111 112
Q ss_pred eeEEEEccCCeEEEEeccCCC
Q 014650 226 CVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 226 ~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..++.+..++.+++.|+.++.
T Consensus 145 i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSC
T ss_pred eeEEEEcCCCCEEEEEcCCCC
Confidence 334444333667777776543
No 40
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.71 E-value=0.065 Score=48.67 Aligned_cols=64 Identities=16% Similarity=0.024 Sum_probs=35.5
Q ss_pred CceEEEeCC--CCceeEecccCCCCCCCCceEEEE-eCCe-EEEEEeecCCCccccccccccccceeeEEEEEeCCccee
Q 014650 321 FDILRYDMG--LNRWLKETTIPEIRPCKKPLGFIV-LDGE-LYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTW 396 (421)
Q Consensus 321 ~~v~~yd~~--~~~W~~~~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 396 (421)
..|.+||.. +.+++.+..++... ...+++. -+++ ||+.++.++ ...++.+|++++++
T Consensus 253 ~~i~v~d~~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~----------------~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 253 SLITVFSVSEDGSVLSKEGFQPTET---QPRGFNVDHSGKYLIAAGQKSH----------------HISVYEIVGEQGLL 313 (343)
T ss_dssp TEEEEEEECTTSCCEEEEEEEECSS---SCCCEEECTTSSEEEEECTTTC----------------EEEEEEEETTTTEE
T ss_pred CEEEEEEEcCCCCceEEeeeecCCC---ccceEEECCCCCEEEEecCCCC----------------eEEEEEEcCCCcee
Confidence 467778776 55677776554321 1222222 2455 555443221 12455558889999
Q ss_pred eEecccC
Q 014650 397 RYIFTKP 403 (421)
Q Consensus 397 ~~i~~~p 403 (421)
+.+...+
T Consensus 314 ~~~~~~~ 320 (343)
T 1ri6_A 314 HEKGRYA 320 (343)
T ss_dssp EEEEEEE
T ss_pred eEccccc
Confidence 8887665
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.18 Score=46.31 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=60.3
Q ss_pred cCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--C--CEEEEEcccccCCCCCCCCCCCCC
Q 014650 69 SQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--G--PYIYLLGGSHFDARSFPLDRPLPS 144 (421)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~ 144 (421)
....+++..+.+ ..+..||....++..+..+... ......+.. + +.+++.|+.+
T Consensus 21 ~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~l~s~~~d-------------- 78 (379)
T 3jrp_A 21 YYGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAHPKFGTILASCSYD-------------- 78 (379)
T ss_dssp SSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCGGGCSEEEEEETT--------------
T ss_pred CCCCEEEEEECC---CcEEEEecCCCcceeeeEecCC-----CCcEEEEEeCCCCCCCEEEEeccC--------------
Confidence 344555555443 2367777766566554333321 122222332 2 5666677642
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
..+.+||..+.+|..+..+........++.+..+ +.+++.|+.+ ..+.+||..+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------------~~i~v~d~~~~~ 136 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------------GKVSVVEFKENG 136 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------------SEEEEEECCTTS
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------------CcEEEEecCCCC
Confidence 3588999999888776655443333444444432 3466666643 247788887763
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.60 E-value=0.11 Score=47.15 Aligned_cols=136 Identities=10% Similarity=0.031 Sum_probs=69.5
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
..+.+|+.... ...+..||+.+.+.......+.. . ..++.. ++.||+.+.. ...+
T Consensus 8 ~~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~------~-~~~~~s~dg~~l~~~~~~--------------~~~i 64 (331)
T 3u4y_A 8 TSNFGIVVEQH--LRRISFFSTDTLEILNQITLGYD------F-VDTAITSDCSNVVVTSDF--------------CQTL 64 (331)
T ss_dssp CCCEEEEEEGG--GTEEEEEETTTCCEEEEEECCCC------E-EEEEECSSSCEEEEEEST--------------TCEE
T ss_pred CCCEEEEEecC--CCeEEEEeCcccceeeeEEccCC------c-ceEEEcCCCCEEEEEeCC--------------CCeE
Confidence 34556665542 24588999999888655333321 1 133332 3458877652 3479
Q ss_pred EEEeCccCce-e-eccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCC
Q 014650 148 FRFNFLTFSW-E-RIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAG 225 (421)
Q Consensus 148 ~~yd~~t~~W-~-~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 225 (421)
++||+.+.+. . .+..-..++ ++++...+...+| ++... .....+.+||..+++-...-+. .. .
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~---------~~~~~i~v~d~~~~~~~~~~~~--~~-~ 129 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQSSM--ADVDITPDDQFAV-TVTGL---------NHPFNMQSYSFLKNKFISTIPI--PY-D 129 (331)
T ss_dssp EEEECSSSSCEEEEEEECSSCC--CCEEECTTSSEEE-ECCCS---------SSSCEEEEEETTTTEEEEEEEC--CT-T
T ss_pred EEEECCCCceeEEecccCCCCc--cceEECCCCCEEE-EecCC---------CCcccEEEEECCCCCeEEEEEC--CC-C
Confidence 9999988774 2 222222222 2133322214566 43321 1123689999998875443221 11 1
Q ss_pred eeEEEE-ccCCeEEEEecc
Q 014650 226 CVGFVA-EESGEFWVMGGY 243 (421)
Q Consensus 226 ~~~~~~-~~~~~iyv~GG~ 243 (421)
..++.+ .+++.+|+.+..
T Consensus 130 ~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp EEEEEECTTSSCEEEEEET
T ss_pred ccceEECCCCCEEEEEecC
Confidence 123333 332357877654
No 43
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.50 E-value=0.36 Score=49.98 Aligned_cols=227 Identities=11% Similarity=0.021 Sum_probs=115.0
Q ss_pred cEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccC
Q 014650 86 PFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMI 164 (421)
Q Consensus 86 ~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 164 (421)
+..||+.++++..... +.. .....-.+++.. ++.|++ |.. ...+++||+.+.+++......
T Consensus 385 l~~~~~~~~~~~~~~~-~~~--~~~~~v~~i~~d~~g~lWi-gt~--------------~~Gl~~~~~~~~~~~~~~~~~ 446 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NRE--LLSNSVLCSLKDSEGNLWF-GTY--------------LGNISYYNTRLKKFQIIELEK 446 (781)
T ss_dssp EEEEETTEEEEECC--------CCCSBEEEEEECTTSCEEE-EET--------------TEEEEEECSSSCEEEECCSTT
T ss_pred EEEEECCCCeEEEccC-CCC--CCCcceEEEEECCCCCEEE-Eec--------------cCCEEEEcCCCCcEEEeccCC
Confidence 6778887776665421 110 001122333333 567776 331 135899999999988775321
Q ss_pred CC-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC---CCCCCeeEEEEccCCeEEEE
Q 014650 165 SP-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP---RFRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 165 ~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~r~~~~~~~~~~~~~iyv~ 240 (421)
.+ ..-.+++... ++.|++... .-+.+||+.+++|+...... .+.....++....++.|++.
T Consensus 447 ~~~~~v~~i~~d~-~g~lwigt~--------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 447 NELLDVRVFYEDK-NKKIWIGTH--------------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp TCCCCEEEEEECT-TSEEEEEET--------------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred CCCCeEEEEEECC-CCCEEEEEC--------------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence 11 1112233332 267776532 23788999998887654322 11112334445545788874
Q ss_pred eccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCccccccccccCeEEEEccccCCCceEEEecC
Q 014650 241 GGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDEWERSRIGKIVVMEDENRGRPEVFMLDK 320 (421)
Q Consensus 241 GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~g~i~v~GG~~~g~~~~~~~~~ 320 (421)
....+ +.+||+.++ +++...... ......+..+-- +....++.-..
T Consensus 512 t~~~G----------------l~~~~~~~~------------~~~~~~~~~----~l~~~~i~~i~~--d~~g~lWi~T~ 557 (781)
T 3v9f_A 512 TFGGG----------------VGIYTPDMQ------------LVRKFNQYE----GFCSNTINQIYR--SSKGQMWLATG 557 (781)
T ss_dssp ESSSC----------------EEEECTTCC------------EEEEECTTT----TCSCSCEEEEEE--CTTSCEEEEET
T ss_pred EcCCC----------------EEEEeCCCC------------eEEEccCCC----CCCCCeeEEEEE--CCCCCEEEEEC
Confidence 32111 334554443 676654311 001122221110 11111444333
Q ss_pred Cce-EEEeCCCCceeEecccCCCCCCCCceEEEEe-CCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeE
Q 014650 321 FDI-LRYDMGLNRWLKETTIPEIRPCKKPLGFIVL-DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRY 398 (421)
Q Consensus 321 ~~v-~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 398 (421)
..+ .+||+.+++++....... +......+++.. +|.|++.+. + .+.+||+++++++.
T Consensus 558 ~Glv~~~d~~~~~~~~~~~~~g-l~~~~i~~i~~d~~g~lW~~t~-~-------------------Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQRKEG-LPNTHIRAISEDKNGNIWASTN-T-------------------GISCYITSKKCFYT 616 (781)
T ss_dssp TEEEEESCTTTCCCEEECGGGT-CSCCCCCEEEECSSSCEEEECS-S-------------------CEEEEETTTTEEEE
T ss_pred CCceEEECCCCCcEEEccccCC-CCCceEEEEEECCCCCEEEEcC-C-------------------ceEEEECCCCceEE
Confidence 566 899999998887643211 111122344443 577887653 2 47788888888777
Q ss_pred ec
Q 014650 399 IF 400 (421)
Q Consensus 399 i~ 400 (421)
..
T Consensus 617 ~~ 618 (781)
T 3v9f_A 617 YD 618 (781)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.46 E-value=0.095 Score=48.25 Aligned_cols=101 Identities=8% Similarity=0.081 Sum_probs=57.7
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.++++|+. ...+.+||..+.+++.+..+.........+.+..++.+++.|+.+
T Consensus 19 ~~~~l~~~~~--------------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d----------- 73 (372)
T 1k8k_C 19 DRTQIAICPN--------------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD----------- 73 (372)
T ss_dssp TSSEEEEECS--------------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----------
T ss_pred CCCEEEEEeC--------------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----------
Confidence 5566667763 246899999998776666554333333333332226666777653
Q ss_pred cceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+.++.....+........++.+..++++++.|+.++.
T Consensus 74 -g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 119 (372)
T 1k8k_C 74 -RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 119 (372)
T ss_dssp -SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS
T ss_pred -CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE
Confidence 2488899988887654332222222334444333667777775543
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.45 E-value=0.5 Score=42.88 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=39.9
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.||+........ .....++++|+.+.+-...-+... .-+.++...+++.+|+.++.+
T Consensus 52 g~~l~~~~~~~~~~--------~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~~----------- 110 (353)
T 3vgz_A 52 ENALWLATSQSRKL--------DKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTVN----------- 110 (353)
T ss_dssp TTEEEEEECCCTTT--------EESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETTT-----------
T ss_pred CCEEEEEcCCCcCC--------CCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecCC-----------
Confidence 45788776421100 013579999998876443322221 122333333214588876642
Q ss_pred cceEEEEECCCCce
Q 014650 200 ISSVERYDVAKNEW 213 (421)
Q Consensus 200 ~~~~~~yd~~t~~W 213 (421)
..+.+||+++.+-
T Consensus 111 -~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 111 -SAVTAIDAKTGEV 123 (353)
T ss_dssp -TEEEEEETTTCCE
T ss_pred -CEEEEEeCCCCee
Confidence 3688999998774
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.44 E-value=0.47 Score=42.48 Aligned_cols=137 Identities=11% Similarity=0.145 Sum_probs=67.8
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
..++++..+.+ ..+..||..+.+....-.-. ......+.. ++.+++.|+. -..+
T Consensus 34 ~~~~l~s~~~d---g~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--------------d~~i 89 (312)
T 4ery_A 34 NGEWLASSSAD---KLIKIWGAYDGKFEKTISGH-------KLGISDVAWSSDSNLLVSASD--------------DKTL 89 (312)
T ss_dssp TSSEEEEEETT---SCEEEEETTTCCEEEEECCC-------SSCEEEEEECTTSSEEEEEET--------------TSEE
T ss_pred CCCEEEEeeCC---CeEEEEeCCCcccchhhccC-------CCceEEEEEcCCCCEEEEECC--------------CCEE
Confidence 34445444443 23678888777665431111 111222222 4566677764 2468
Q ss_pred EEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCee
Q 014650 148 FRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCV 227 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~ 227 (421)
.+||..+.+-.. .+......-.++.+..++.+++.|+.+ ..+.+||..+.+-... ++.......
T Consensus 90 ~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~--~~~~~~~v~ 153 (312)
T 4ery_A 90 KIWDVSSGKCLK--TLKGHSNYVFCCNFNPQSNLIVSGSFD------------ESVRIWDVKTGKCLKT--LPAHSDPVS 153 (312)
T ss_dssp EEEETTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETT------------SCEEEEETTTCCEEEE--ECCCSSCEE
T ss_pred EEEECCCCcEEE--EEcCCCCCEEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCEEEEE--ecCCCCcEE
Confidence 889987765322 111111122233333225667777754 2378899887763321 111111223
Q ss_pred EEEEccCCeEEEEeccCCC
Q 014650 228 GFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 228 ~~~~~~~~~iyv~GG~~~~ 246 (421)
++.+..++.+++.|+.++.
T Consensus 154 ~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp EEEECTTSSEEEEEETTSC
T ss_pred EEEEcCCCCEEEEEeCCCc
Confidence 3444333677777776553
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.30 E-value=0.73 Score=43.11 Aligned_cols=57 Identities=9% Similarity=0.124 Sum_probs=31.8
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCccee
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTW 396 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 396 (421)
..|.+||..+.+...+..+.... .+.......-+++.++.||.++ .|.+||..+++-
T Consensus 327 g~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~dg------------------~i~iw~~~~~~~ 383 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASDE------------------NLKFWRVYDGDH 383 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTTS------------------EEEEEECCC---
T ss_pred CcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCCC------------------cEEEEECCCCcc
Confidence 46778888877776664443211 1122222333677778887653 578888776653
No 48
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.06 E-value=1.1 Score=46.33 Aligned_cols=124 Identities=8% Similarity=-0.006 Sum_probs=67.2
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
-++.||+.+++++.......+ ...-.+++.. ++.|++... ..+++||+.+.+|+.....
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~----~~~v~~i~~d~~g~lwigt~----------------~Gl~~~~~~~~~~~~~~~~ 487 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNE----LLDVRVFYEDKNKKIWIGTH----------------AGVFVIDLASKKVIHHYDT 487 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTC----CCCEEEEEECTTSEEEEEET----------------TEEEEEESSSSSCCEEECT
T ss_pred CEEEEcCCCCcEEEeccCCCC----CCeEEEEEECCCCCEEEEEC----------------CceEEEeCCCCeEEecccC
Confidence 377889988888887532111 1122333333 567776432 3589999999998776533
Q ss_pred CC---CccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC-CCCCCeeEEEEccCCeEEE
Q 014650 164 IS---PRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP-RFRAGCVGFVAEESGEFWV 239 (421)
Q Consensus 164 ~~---~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~~iyv 239 (421)
.. ..........+.++.|++.... .-+.+||+.+++++...... .+.....++....++.|++
T Consensus 488 ~~~~~~~~~i~~i~~d~~g~lWigt~~-------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi 554 (781)
T 3v9f_A 488 SNSQLLENFVRSIAQDSEGRFWIGTFG-------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL 554 (781)
T ss_dssp TTSSCSCSCEEEEEECTTCCEEEEESS-------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE
T ss_pred cccccccceeEEEEEcCCCCEEEEEcC-------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE
Confidence 21 1111122222222677765321 12778999999888764311 1111233444444477887
Q ss_pred Ee
Q 014650 240 MG 241 (421)
Q Consensus 240 ~G 241 (421)
..
T Consensus 555 ~T 556 (781)
T 3v9f_A 555 AT 556 (781)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 49
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.01 E-value=0.92 Score=44.76 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=54.6
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
...+|+.+.. ...+..+|..+.+-... ++.. ..-|.++.. +.+||+.+.. ..+.
T Consensus 148 ~~~~~vs~~~--d~~V~v~D~~t~~~~~~--i~~g-----~~~~~v~~spdg~~l~v~~~d---------------~~V~ 203 (543)
T 1nir_A 148 PNLFSVTLRD--AGQIALVDGDSKKIVKV--IDTG-----YAVHISRMSASGRYLLVIGRD---------------ARID 203 (543)
T ss_dssp GGEEEEEEGG--GTEEEEEETTTCCEEEE--EECS-----TTEEEEEECTTSCEEEEEETT---------------SEEE
T ss_pred CCEEEEEEcC--CCeEEEEECCCceEEEE--EecC-----cccceEEECCCCCEEEEECCC---------------CeEE
Confidence 3456665542 24577899988765432 2211 123444433 4567766531 5699
Q ss_pred EEeC--ccCceeeccccCCCccceEEEEEc----cCCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 149 RFNF--LTFSWERIAPMISPRGSFACAAVR----SLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 149 ~yd~--~t~~W~~~~~~~~~r~~~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
+||. .+.+ .+..++....-..++.-. ++..+|+.... ...+.++|..+.+-
T Consensus 204 v~D~~~~t~~--~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~------------~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 204 MIDLWAKEPT--KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYW------------PPQFAIMDGETLEP 260 (543)
T ss_dssp EEETTSSSCE--EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE------------SSEEEEEETTTCCE
T ss_pred EEECcCCCCc--EEEEEecCCCcceEEeCCCcCCCCCEEEEEEcc------------CCeEEEEecccccc
Confidence 9999 5543 333344333223333321 21456655422 23477888887653
No 50
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.98 E-value=0.48 Score=42.87 Aligned_cols=67 Identities=12% Similarity=0.056 Sum_probs=37.4
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-C-CEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-G-PYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
+.+|+.+.. ...++.+|+.+.+....-+++.. ...+.++.. + +.+|+.+.. ...+++
T Consensus 11 ~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~~~v~~~~--------------~~~i~~ 69 (349)
T 1jmx_B 11 HEYMIVTNY--PNNLHVVDVASDTVYKSCVMPDK-----FGPGTAMMAPDNRTAYVLNNH--------------YGDIYG 69 (349)
T ss_dssp CEEEEEEET--TTEEEEEETTTTEEEEEEECSSC-----CSSCEEEECTTSSEEEEEETT--------------TTEEEE
T ss_pred CEEEEEeCC--CCeEEEEECCCCcEEEEEecCCC-----CCCceeEECCCCCEEEEEeCC--------------CCcEEE
Confidence 444554432 34688999988876543233320 011233333 3 467877642 356999
Q ss_pred EeCccCceee
Q 014650 150 FNFLTFSWER 159 (421)
Q Consensus 150 yd~~t~~W~~ 159 (421)
||+.+.+-..
T Consensus 70 ~d~~t~~~~~ 79 (349)
T 1jmx_B 70 IDLDTCKNTF 79 (349)
T ss_dssp EETTTTEEEE
T ss_pred EeCCCCcEEE
Confidence 9998876543
No 51
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=95.97 E-value=0.0024 Score=57.03 Aligned_cols=42 Identities=26% Similarity=0.300 Sum_probs=38.7
Q ss_pred CCCChHHHHHHHhcCCCcchhHHHHhhhHhHHhhhcCCcccc
Q 014650 21 IPGLPNDVASLILAFVPYSHQSRLKQTCRSWFLFFSSRTLVF 62 (421)
Q Consensus 21 ~~~Lp~dl~~~~l~~lp~~~~~~~~~v~k~W~~l~~~~~~~~ 62 (421)
+..||+|++..||++|+..++.++..|||+|+.+..++.+.+
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr 46 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 46 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHH
Confidence 557999999999999999999999999999999999987654
No 52
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=95.94 E-value=0.0036 Score=57.80 Aligned_cols=44 Identities=16% Similarity=0.367 Sum_probs=38.4
Q ss_pred ccccCCCChHHHHHHHhcCCCcchhHHHHhhhHhHHhhhcCCcc
Q 014650 17 TVTLIPGLPNDVASLILAFVPYSHQSRLKQTCRSWFLFFSSRTL 60 (421)
Q Consensus 17 ~~~~~~~Lp~dl~~~~l~~lp~~~~~~~~~v~k~W~~l~~~~~~ 60 (421)
+...|..||+|++.+||.+++..++.++..|||+|+.+..++.+
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 45668999999999999999999999999999999999876653
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.91 E-value=0.77 Score=39.94 Aligned_cols=123 Identities=10% Similarity=-0.030 Sum_probs=60.8
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..+..||+.+........... ..-.+++.. ++.||+... ...+++||+.+.....+..
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~---------------~~~i~~~d~~~~~~~~~~~ 104 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL------YQPQGLAVDGAGTVYVTDF---------------NNRVVTLAAGSNNQTVLPF 104 (270)
T ss_dssp CEEEEECC-----EECCCCSC------CSCCCEEECTTCCEEEEET---------------TTEEEEECTTCSCCEECCC
T ss_pred CcEEEecCCCcccceEeeCCc------CCcceeEECCCCCEEEEcC---------------CCEEEEEeCCCceEeeeec
Confidence 457888887766555432111 112334443 567888754 1358999988876544432
Q ss_pred cCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
. ....-.++++..+ +++|+.... ...+.+|+..+............ ...++++..+++||+...
T Consensus 105 ~-~~~~p~~i~~~~~-g~l~v~~~~------------~~~i~~~~~~~~~~~~~~~~~~~--~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 105 D-GLNYPEGLAVDTQ-GAVYVADRG------------NNRVVKLAAGSKTQTVLPFTGLN--DPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp C-SCSSEEEEEECTT-CCEEEEEGG------------GTEEEEECTTCCSCEECCCCSCC--SCCCEEECTTCCEEEEEG
T ss_pred C-CcCCCcceEECCC-CCEEEEECC------------CCEEEEEECCCceeEeeccccCC--CceeEEEeCCCCEEEEEC
Confidence 1 1111233333322 789987543 23477787776654433221111 122344443478998764
Q ss_pred c
Q 014650 243 Y 243 (421)
Q Consensus 243 ~ 243 (421)
.
T Consensus 169 ~ 169 (270)
T 1rwi_B 169 D 169 (270)
T ss_dssp G
T ss_pred C
Confidence 3
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.89 E-value=0.23 Score=45.35 Aligned_cols=28 Identities=7% Similarity=0.082 Sum_probs=16.7
Q ss_pred EEEeCCCCCCCccEEEeCCCCcEEECCC
Q 014650 74 LCIFPQDPSISSPFLFDAANRACRPLPP 101 (421)
Q Consensus 74 ~~~~g~~~~~~~~~~~d~~~~~W~~l~~ 101 (421)
+|+.........++.||..+.+++.+..
T Consensus 53 l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 53 LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 5655432123457888887777766543
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.86 E-value=0.57 Score=42.01 Aligned_cols=87 Identities=10% Similarity=0.088 Sum_probs=44.7
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+......+...........+..++..++.|+.+ ..+.+||..+.+....-... ..
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------------g~v~~~d~~~~~~~~~~~~~--~~ 184 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------------GNIAVWDLHNQTLVRQFQGH--TD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCC--SS
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCceeeeeecc--cC
Confidence 46899999888755444443332223333332226666676653 24888999887643321111 11
Q ss_pred CeeEEEEccCCeEEEEeccCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~ 245 (421)
...++.+..++..++.|+.++
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg 205 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN 205 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEECCCCCEEEEEecCC
Confidence 223344433366666776544
No 56
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.83 E-value=1 Score=40.84 Aligned_cols=130 Identities=8% Similarity=-0.023 Sum_probs=66.9
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeecc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIA 161 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~ 161 (421)
.+..+|+.+.+......-.. + ..-+.++.. ++.||+.... ...|.+||+..+. -..+.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~----~-~~p~gia~d~~g~l~v~d~~--------------~~~v~~~~~~g~~~~~~~~~ 130 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL----F-YLPHGLSIDTDGNYWVTDVA--------------LHQVFKLDPHSKEGPLLILG 130 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT----C-SSEEEEEECTTSCEEEEETT--------------TTEEEEECTTCSSCCSEEES
T ss_pred cEEEEECCCCeEEeccCCCc----c-CCceEEEECCCCCEEEEECC--------------CCEEEEEeCCCCeEEEEEec
Confidence 58899998777643211110 1 122344443 6779987652 3579999986652 22222
Q ss_pred cc------CCCccceEEEEEcc-CCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCC-------CCCCCCee
Q 014650 162 PM------ISPRGSFACAAVRS-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEM-------PRFRAGCV 227 (421)
Q Consensus 162 ~~------~~~r~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------~~~r~~~~ 227 (421)
.. .........+++.. ++.|||..+.. ...+.+||+....-..+... +.......
T Consensus 131 ~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-----------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~ 199 (329)
T 3fvz_A 131 RSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-----------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPH 199 (329)
T ss_dssp BTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-----------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEE
T ss_pred ccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-----------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCc
Confidence 11 11111233444432 38999998631 23578888554433333211 11111234
Q ss_pred EEEEccC-CeEEEEeccC
Q 014650 228 GFVAEES-GEFWVMGGYG 244 (421)
Q Consensus 228 ~~~~~~~-~~iyv~GG~~ 244 (421)
++++..+ +.|||....+
T Consensus 200 gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 200 SLALVPHLDQLCVADREN 217 (329)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCEEEEEECCC
Confidence 5555433 7999987543
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.78 E-value=0.93 Score=39.92 Aligned_cols=133 Identities=7% Similarity=0.023 Sum_probs=68.6
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
..+++... ....+..||+. .+...+. ++.. . ..-++++.. ++.||+.... ...+.+|
T Consensus 31 g~l~v~~~--~~~~v~~~~~~-~~~~~~~-~~~~---~-~~~~~i~~~~~g~l~v~~~~--------------~~~v~~~ 88 (300)
T 2qc5_A 31 GKVWFTQH--KANKISSLDQS-GRIKEFE-VPTP---D-AKVMCLIVSSLGDIWFTENG--------------ANKIGKL 88 (300)
T ss_dssp SCEEEEET--TTTEEEEECTT-SCEEEEE-CSST---T-CCEEEEEECTTSCEEEEETT--------------TTEEEEE
T ss_pred CCEEEEcC--CCCeEEEECCC-CceEEEE-CCCC---C-CcceeEEECCCCCEEEEecC--------------CCeEEEE
Confidence 44555432 12457889988 6766532 2211 0 122344443 5778886531 3468999
Q ss_pred eCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEE
Q 014650 151 NFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFV 230 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~ 230 (421)
|+. .++...........-+.+++..+ +.+|+.... ...+.+||+. ++..... ++.......+++
T Consensus 89 d~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~------------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~ 152 (300)
T 2qc5_A 89 SKK-GGFTEYPLPQPDSGPYGITEGLN-GDIWFTQLN------------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFIT 152 (300)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECST-TCEEEEETT------------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEE
T ss_pred CCC-CCeEEecCCCCCCCCccceECCC-CCEEEEccC------------CCeEEEECCC-CCEEEcc-CCCCCCCceeEE
Confidence 988 66654432111222233343322 789887542 1247788887 5554332 121112233455
Q ss_pred EccCCeEEEEec
Q 014650 231 AEESGEFWVMGG 242 (421)
Q Consensus 231 ~~~~~~iyv~GG 242 (421)
+..+++||+...
T Consensus 153 ~d~~g~l~v~~~ 164 (300)
T 2qc5_A 153 LGSDNALWFTEN 164 (300)
T ss_dssp ECTTSSEEEEET
T ss_pred ECCCCCEEEEec
Confidence 544477888653
No 58
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.76 E-value=1.4 Score=41.67 Aligned_cols=187 Identities=9% Similarity=0.006 Sum_probs=94.1
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCE-EEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQ-IIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 223 (421)
..++++|..+.+...+...+. ......+..+++ |++.+..+ ....++++|..+++...+.....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~---~~~~~~~spdg~~la~~~~~~----------g~~~i~~~d~~~~~~~~l~~~~~-- 267 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR---HNGAPAFSPDGSKLAFALSKT----------GSLNLYVMDLASGQIRQVTDGRS-- 267 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS---CEEEEEECTTSSEEEEEECTT----------SSCEEEEEETTTCCEEECCCCSS--
T ss_pred cEEEEEECCCCcEEEeecCCC---cccCEEEcCCCCEEEEEEecC----------CCceEEEEECCCCCEEeCcCCCC--
Confidence 579999999988776654332 222333332244 55455432 13468999999988776654321
Q ss_pred CCeeEEEEccCCe-EEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecCcccc---cccccc
Q 014650 224 AGCVGFVAEESGE-FWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGDMWDE---WERSRI 299 (421)
Q Consensus 224 ~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~~~~~---~~~~~~ 299 (421)
......+.-+++ |++.+..++.. .++.+|..++ +-..+...... ..-...
T Consensus 268 -~~~~~~~spdg~~l~~~s~~~g~~-------------~i~~~d~~~~------------~~~~l~~~~~~~~~~~~spd 321 (415)
T 2hqs_A 268 -NNTEPTWFPDSQNLAFTSDQAGRP-------------QVYKVNINGG------------APQRITWEGSQNQDADVSSD 321 (415)
T ss_dssp -CEEEEEECTTSSEEEEEECTTSSC-------------EEEEEETTSS------------CCEECCCSSSEEEEEEECTT
T ss_pred -cccceEECCCCCEEEEEECCCCCc-------------EEEEEECCCC------------CEEEEecCCCcccCeEECCC
Confidence 122333322254 44443222211 1445555544 32222111000 011122
Q ss_pred CeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccc
Q 014650 300 GKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHK 379 (421)
Q Consensus 300 g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~ 379 (421)
|+.+++++.-++ ...|+++|..+.+...+..-. ........-+++.+++++.++..
T Consensus 322 G~~l~~~~~~~g--------~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~spdg~~l~~~s~~~~~----------- 377 (415)
T 2hqs_A 322 GKFMVMVSSNGG--------QQHIAKQDLATGGVQVLSSTF-----LDETPSLAPNGTMVIYSSSQGMG----------- 377 (415)
T ss_dssp SSEEEEEEECSS--------CEEEEEEETTTCCEEECCCSS-----SCEEEEECTTSSEEEEEEEETTE-----------
T ss_pred CCEEEEEECcCC--------ceEEEEEECCCCCEEEecCCC-----CcCCeEEcCCCCEEEEEEcCCCc-----------
Confidence 444444432011 146889999988876653221 11122233467777777654321
Q ss_pred cceeeEEEEEeCCcceeeEec
Q 014650 380 RAGCLFIQIYHPRKKTWRYIF 400 (421)
Q Consensus 380 ~~~~~~v~~yd~~~~~W~~i~ 400 (421)
..++.+|...+..+.+.
T Consensus 378 ----~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 378 ----SVLNLVSTDGRFKARLP 394 (415)
T ss_dssp ----EEEEEEETTSCCEEECC
T ss_pred ----cEEEEEECCCCcEEEee
Confidence 47899998877766654
No 59
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.75 E-value=0.55 Score=44.20 Aligned_cols=88 Identities=8% Similarity=0.052 Sum_probs=51.1
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC---C
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP---R 221 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~ 221 (421)
..++.+|+.+.+++.+..++.+..-.+++... ++.+++.++.+ ..+.+||..+++.....+.. .
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~------------~~i~~~d~~~g~~~~~~~~~~~~~ 167 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIPLLED------------EGMDVLDINSGQTVRLSPPEKYKK 167 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTS------------SSEEEEETTTCCEEEECCCHHHHT
T ss_pred eEEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCC------------CeEEEEECCCCeEeeecCcccccc
Confidence 36899999877776665554443222333322 17888887743 24889999988766543321 1
Q ss_pred CCCCeeEEEEccCCeEEEEeccCC
Q 014650 222 FRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 222 ~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
......++.+..++.+++.++.++
T Consensus 168 ~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 168 KLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp TCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred cCCceeEEEEcCCCEEEEEECCCC
Confidence 111222344433378888887544
No 60
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.72 E-value=0.13 Score=45.51 Aligned_cols=107 Identities=10% Similarity=-0.070 Sum_probs=73.4
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
.+.+|...|....+.+..+|+.+.+=..--+++.. ..+.+++..+++||+.... .+.+++|
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~g~~ly~ltw~--------------~~~v~v~ 112 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDWKDKIVGLTWK--------------NGLGFVW 112 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEESS--------------SSEEEEE
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-----cceeEEEEeCCEEEEEEee--------------CCEEEEE
Confidence 46777776643345688999999886554445432 3455678889999999653 4679999
Q ss_pred eCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 151 NFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
|+.|.+-. ..++.+-.+.+++.-+ +.+|+.-| .+.+..+|+++.+-
T Consensus 113 D~~t~~~~--~ti~~~~eG~glt~dg--~~L~~SdG-------------s~~i~~iDp~T~~v 158 (262)
T 3nol_A 113 NIRNLRQV--RSFNYDGEGWGLTHND--QYLIMSDG-------------TPVLRFLDPESLTP 158 (262)
T ss_dssp ETTTCCEE--EEEECSSCCCCEEECS--SCEEECCS-------------SSEEEEECTTTCSE
T ss_pred ECccCcEE--EEEECCCCceEEecCC--CEEEEECC-------------CCeEEEEcCCCCeE
Confidence 99886643 3333333556777666 78888765 24588999998763
No 61
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.72 E-value=0.94 Score=39.49 Aligned_cols=107 Identities=12% Similarity=-0.027 Sum_probs=56.8
Q ss_pred CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEE-eCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCcc-Ccee
Q 014650 81 PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSIS-LGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLT-FSWE 158 (421)
Q Consensus 81 ~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t-~~W~ 158 (421)
.....++.+|..+++...+..... .-.+++. -++..+++++. ..+++||..+ .+..
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~-------~v~~~~~spdg~~l~~~~~---------------~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPE-------LFEAPNWSPDGKYLLLNSE---------------GLLYRLSLAGDPSPE 76 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESS-------CCEEEEECTTSSEEEEEET---------------TEEEEEESSSCCSCE
T ss_pred CcceeEEEEeCCCCceeeeccCCc-------ceEeeEECCCCCEEEEEcC---------------CeEEEEeCCCCCCce
Confidence 344568899998888765533221 1122222 25555555541 3699999988 7766
Q ss_pred eccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 159 RIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 159 ~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
.+........-..++...+ ++.+++++.. ......++.++..+..-..+..
T Consensus 77 ~~~~~~~~~~~~~~~~spd-g~~l~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 77 KVDTGFATICNNDHGISPD-GALYAISDKV--------EFGKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp ECCCTTCCCBCSCCEECTT-SSEEEEEECT--------TTSSCEEEEEETTCCCCEECCS
T ss_pred EeccccccccccceEECCC-CCEEEEEEeC--------CCCcceEEEEECCCCceEEeec
Confidence 6543322111112222222 5544454422 1124568888888777655543
No 62
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.72 E-value=0.33 Score=43.08 Aligned_cols=133 Identities=13% Similarity=0.006 Sum_probs=81.0
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEe
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFN 151 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd 151 (421)
..+|+..+....+.+..+|+.+++=..--+++.. ....+++..+++||+.... .+.+++||
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~g~~lyv~t~~--------------~~~v~viD 92 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLLNEKLYQVVWL--------------KNIGFIYD 92 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETTEEEEEETT--------------CSEEEEEE
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEeCCEEEEEEec--------------CCEEEEEE
Confidence 5788876543456799999999886554334321 2445677779999998652 46799999
Q ss_pred CccCceeeccccCCC-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-C--CCCCCCCCCee
Q 014650 152 FLTFSWERIAPMISP-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-M--DEMPRFRAGCV 227 (421)
Q Consensus 152 ~~t~~W~~~~~~~~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-~--~~~~~~r~~~~ 227 (421)
+.|.+= +..++.+ -.+.+++.-+ +++|+.-| .+.+.++|+++.+=.. + ...+.+....-
T Consensus 93 ~~t~~v--~~~i~~g~~~g~glt~Dg--~~l~vs~g-------------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 93 RRTLSN--IKNFTHQMKDGWGLATDG--KILYGSDG-------------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp TTTTEE--EEEEECCSSSCCEEEECS--SSEEEECS-------------SSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CCCCcE--EEEEECCCCCeEEEEECC--CEEEEECC-------------CCeEEEEECCCCcEEEEEEECCCCcccccce
Confidence 987653 2233333 3345566555 78998754 3468999999876322 2 22222222222
Q ss_pred EEEEccCCeEEEEe
Q 014650 228 GFVAEESGEFWVMG 241 (421)
Q Consensus 228 ~~~~~~~~~iyv~G 241 (421)
.+.+.+ +++|+--
T Consensus 156 ele~~d-g~lyvn~ 168 (266)
T 2iwa_A 156 ELEYIN-GEVWANI 168 (266)
T ss_dssp EEEEET-TEEEEEE
T ss_pred eEEEEC-CEEEEec
Confidence 333334 7888764
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.21 Score=51.52 Aligned_cols=108 Identities=10% Similarity=0.096 Sum_probs=61.7
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--C--CEEEEEcccccCCCCCCCCCCCCCC
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--G--PYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
..++++..+.+ ..+..||....++..+..+... ......+.. + +..++.|+.+ .
T Consensus 20 dg~~latg~~d---g~I~vwd~~~~~~~~~~~l~~h-----~~~V~~l~~s~~~~~~~l~s~s~D--------------g 77 (753)
T 3jro_A 20 YGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGH-----EGPVWRVDWAHPKFGTILASCSYD--------------G 77 (753)
T ss_dssp SSCCEEEEETT---TEEEEEEEETTEEEEEEEECCC-----SSCEEEEEECCTTSCSEEEEEETT--------------S
T ss_pred CCCeEEEEECC---CcEEEEecCCCCCccceeccCC-----cCceEEEEecCCCCCCEEEEEeCC--------------C
Confidence 44555555443 3477788776666665444421 122222332 2 5667777642 4
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
.+.+||..+.+|..+..+........++.+..+ +.+++.|+.+ ..+.+||..+.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------------g~I~vwdl~~~ 133 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------------GKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------------SEEEEEECCSS
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC------------CcEEEEEeecC
Confidence 588999999888776655444334444444432 4566666653 24778887765
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.62 E-value=1.6 Score=41.38 Aligned_cols=57 Identities=7% Similarity=0.209 Sum_probs=32.5
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceee
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWR 397 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 397 (421)
..|.+||..+.+-.. .+............+..++.+++.|+.++ .|.+||..+++..
T Consensus 339 g~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~l~s~~~dg------------------~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQ--TLQGPNKHQSAVTCLQFNKNFVITSSDDG------------------TVKLWDLKTGEFI 395 (445)
T ss_dssp SCEEEEETTTCCEEE--EECSTTSCSSCEEEEEECSSEEEEEETTS------------------EEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEE--EEccCCCCCCCEEEEEECCCEEEEEeCCC------------------eEEEEECCCCcee
Confidence 457788877654322 22211001123344556788888887663 6788888777653
No 65
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.57 E-value=1.1 Score=39.37 Aligned_cols=99 Identities=13% Similarity=0.239 Sum_probs=53.7
Q ss_pred eEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 114 FTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 114 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
++++.. ++.||+.... ...+.+||+. .+..... ++..........++.++.+|+....
T Consensus 23 ~~i~~d~~g~l~v~~~~--------------~~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~----- 81 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHK--------------ANKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENG----- 81 (300)
T ss_dssp EEEEECTTSCEEEEETT--------------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT-----
T ss_pred ceeeECCCCCEEEEcCC--------------CCeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecC-----
Confidence 344433 5788886532 3468999988 6666543 2222122223333322788887542
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
...+.+||+. +++..... +.......++++..++.+|+...
T Consensus 82 -------~~~v~~~d~~-g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 82 -------ANKIGKLSKK-GGFTEYPL-PQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp -------TTEEEEECTT-SCEEEEEC-SSTTCCEEEEEECSTTCEEEEET
T ss_pred -------CCeEEEECCC-CCeEEecC-CCCCCCCccceECCCCCEEEEcc
Confidence 2347889988 66654321 11112234555554488988754
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.41 E-value=1.2 Score=40.99 Aligned_cols=132 Identities=8% Similarity=0.120 Sum_probs=63.2
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc-eeec
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS-WERI 160 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~-W~~~ 160 (421)
..+..||..++.|..+..+... ......+.. ++..++.|+.+ ..+.+||..+.+ |...
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s~d--------------~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDH-----DKIVTCVDWAPKSNRIVTCSQD--------------RNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCC-----SSCEEEEEECTTTCCEEEEETT--------------SSEEEC------CCCCE
T ss_pred CEEEEEEccCCceEEEEEEecC-----CceEEEEEEeCCCCEEEEEeCC--------------CeEEEEEcCCCCceeee
Confidence 3477888888888877666532 122222222 45666666642 358889988877 6554
Q ss_pred cccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc-eEECCCCCC-CCCCeeEEEEccCCeEE
Q 014650 161 APMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE-WVSMDEMPR-FRAGCVGFVAEESGEFW 238 (421)
Q Consensus 161 ~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~-~r~~~~~~~~~~~~~iy 238 (421)
..+........++.+..+++.++.|+.+ ..+.+||..+.+ |..+..+.. ......++.+..++++.
T Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSPNEDKFAVGSGA------------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp EECCCCSSCEEEEECCTTSSCCEEEESS------------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred eEecccCCceEEEEECCCCCEEEEEecC------------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 4333222223333332225666666653 237778877764 433322222 12223344444336777
Q ss_pred EEeccCCC
Q 014650 239 VMGGYGDS 246 (421)
Q Consensus 239 v~GG~~~~ 246 (421)
+.|+.++.
T Consensus 162 ~~~~~d~~ 169 (377)
T 3dwl_C 162 AAGCADRK 169 (377)
T ss_dssp EEEESSSC
T ss_pred EEEeCCCE
Confidence 77776543
No 67
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.39 E-value=1.3 Score=38.94 Aligned_cols=121 Identities=6% Similarity=-0.014 Sum_probs=63.5
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..+..||+. .++..... +.. ...-++++.. ++.||+.... ...+++||+. .+.+.+.
T Consensus 36 ~~v~~~d~~-~~~~~~~~-~~~----~~~~~~i~~~~~g~l~v~~~~--------------~~~i~~~~~~-g~~~~~~- 93 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPL-PTP----DAKVMCLTISSDGEVWFTENA--------------ANKIGRITKK-GIIKEYT- 93 (299)
T ss_dssp TEEEEECTT-CCEEEEEC-SST----TCCEEEEEECTTSCEEEEETT--------------TTEEEEECTT-SCEEEEE-
T ss_pred CcEEEEcCC-CCeEEecC-Ccc----cCceeeEEECCCCCEEEeCCC--------------CCeEEEECCC-CcEEEEe-
Confidence 358899988 77765432 111 0122344443 6788887542 2458899986 4454443
Q ss_pred cCC-CccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEe
Q 014650 163 MIS-PRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 163 ~~~-~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~G 241 (421)
++. ...-++++...+ +.+|+.... ...+.+||+ +++...... +.......+++...++.+|+..
T Consensus 94 ~~~~~~~~~~i~~~~~-g~l~v~~~~------------~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 94 LPNPDSAPYGITEGPN-GDIWFTEMN------------GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CSSTTCCEEEEEECTT-SCEEEEETT------------TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEE
T ss_pred CCCcCCCceeeEECCC-CCEEEEecC------------CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEe
Confidence 221 222233444322 789887543 134778888 555544321 1111223345555447898865
No 68
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.39 E-value=1.3 Score=38.95 Aligned_cols=131 Identities=14% Similarity=0.029 Sum_probs=64.7
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEE--eCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSIS--LGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA 161 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 161 (421)
..+..||+.......+.......... ..-..++. .++.||+.+.. ....+.+||+....-..+.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~-~~p~~i~~~~~~g~l~v~~~~-------------~~~~i~~~d~~g~~~~~~~ 116 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQL-LYPNRVAVVRNSGDIIVTERS-------------PTHQIQIYNQYGQFVRKFG 116 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCB-SSEEEEEEETTTTEEEEEECG-------------GGCEEEEECTTSCEEEEEC
T ss_pred CEEEEECCCCcEEEEecccCCCcccc-cCceEEEEEcCCCeEEEEcCC-------------CCCEEEEECCCCcEEEEec
Confidence 34788988755444443211100001 12234444 36889988642 1246889996544333332
Q ss_pred ccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEe
Q 014650 162 PMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~G 241 (421)
. .....-..+++.. ++++|+.... ...+.+||+.......+.... ......++++..++.||+..
T Consensus 117 ~-~~~~~~~~i~~~~-~g~l~v~~~~------------~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 117 A-TILQHPRGVTVDN-KGRIIVVECK------------VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp T-TTCSCEEEEEECT-TSCEEEEETT------------TTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEE
T ss_pred C-ccCCCceEEEEeC-CCCEEEEECC------------CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEE
Confidence 1 1111122333333 2789988653 235788887655444332111 11123345555447899876
Q ss_pred cc
Q 014650 242 GY 243 (421)
Q Consensus 242 G~ 243 (421)
..
T Consensus 182 ~~ 183 (286)
T 1q7f_A 182 NR 183 (286)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 69
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.31 E-value=0.31 Score=44.53 Aligned_cols=62 Identities=2% Similarity=-0.017 Sum_probs=35.6
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
.+|.+|..+.+++.+....... .....++..+++||+.+... ....+.+||..+++++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~-~p~~~a~spdg~l~~~~~~~----------~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQ-NPTYLALSAKDCLYSVDKED----------DEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECS-CCCCEEECTTCEEEEEEEET----------TEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccC-CcceEEEccCCeEEEEEecC----------CCceEEEEEecCCcEEEeee
Confidence 4777788888877654322221 12222332227788776421 13458889998888766544
No 70
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.30 E-value=0.17 Score=44.80 Aligned_cols=105 Identities=9% Similarity=-0.014 Sum_probs=70.6
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
..+.+|+..+.. ..+..+|+.+.+-..-- ++.. ..+.+++..+++||+.... .+.+++
T Consensus 63 ~~~~Ly~stG~~--g~v~~iD~~Tgkv~~~~-l~~~-----~FgeGit~~g~~Ly~ltw~--------------~~~v~V 120 (268)
T 3nok_A 63 HQGHFFESTGHQ--GTLRQLSLESAQPVWME-RLGN-----IFAEGLASDGERLYQLTWT--------------EGLLFT 120 (268)
T ss_dssp ETTEEEEEETTT--TEEEECCSSCSSCSEEE-ECTT-----CCEEEEEECSSCEEEEESS--------------SCEEEE
T ss_pred ECCEEEEEcCCC--CEEEEEECCCCcEEeEE-CCCC-----cceeEEEEeCCEEEEEEcc--------------CCEEEE
Confidence 356777776642 22888999887653322 4421 2445677889999998552 467999
Q ss_pred EeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 150 FNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 150 yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
||+.|.+-. ..++.+-.+.+++..+ +++|+.-|. +.+..+|+++.+-
T Consensus 121 ~D~~Tl~~~--~ti~~~~eGwGLt~Dg--~~L~vSdGs-------------~~l~~iDp~T~~v 167 (268)
T 3nok_A 121 WSGMPPQRE--RTTRYSGEGWGLCYWN--GKLVRSDGG-------------TMLTFHEPDGFAL 167 (268)
T ss_dssp EETTTTEEE--EEEECSSCCCCEEEET--TEEEEECSS-------------SEEEEECTTTCCE
T ss_pred EECCcCcEE--EEEeCCCceeEEecCC--CEEEEECCC-------------CEEEEEcCCCCeE
Confidence 999886643 2233344467777777 899998762 3588999999764
No 71
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.30 E-value=1.2 Score=40.66 Aligned_cols=86 Identities=13% Similarity=-0.020 Sum_probs=41.2
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceE--EEEECCCCceEECCCCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSV--ERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~--~~yd~~t~~W~~~~~~~~~r 223 (421)
.+|.+|+.+.+++.+......... .++.-.+...||+.+... .....+ +.++..+++.+.+...+...
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~-~l~~spdg~~l~~~~~~~---------~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPS-YLIPSADGKFVYSVNEFS---------KDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCC-SEEECTTSSEEEEEECCS---------STTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred EEEEEeCCCCCEEEeecccCCCCc-eEEECCCCCEEEEEEccC---------CCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 456667888888776654111111 122222114577776531 012234 44556557776654433222
Q ss_pred CCeeEEEEccCCeEEEEec
Q 014650 224 AGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 224 ~~~~~~~~~~~~~iyv~GG 242 (421)
.....+.. +++.||+.+.
T Consensus 100 ~~p~~~~~-dg~~l~~~~~ 117 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANY 117 (361)
T ss_dssp SCEEEEEE-CSSEEEEEET
T ss_pred CCcEEEEE-CCCEEEEEEC
Confidence 22233334 4356776653
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.29 E-value=0.078 Score=49.17 Aligned_cols=100 Identities=8% Similarity=0.104 Sum_probs=51.5
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+. -..+.+||..+..|+.+..+........++.+..++.+++.|+.+
T Consensus 22 ~g~~l~~~~~--------------d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d----------- 76 (377)
T 3dwl_C 22 QRTEFVTTTA--------------TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD----------- 76 (377)
T ss_dssp SSSEEECCCS--------------SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----------
T ss_pred CCCEEEEecC--------------CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----------
Confidence 4566667664 235788898888887776665433333444443226667777653
Q ss_pred cceEEEEECCCCc-eEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 200 ISSVERYDVAKNE-WVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 200 ~~~~~~yd~~t~~-W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
..+.+||..+.. |.....+........++.+..++++.+.|+.++
T Consensus 77 -~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (377)
T 3dwl_C 77 -RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR 122 (377)
T ss_dssp -SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS
T ss_pred -CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC
Confidence 237888888876 543322222222233444433366666776554
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.23 E-value=1.2 Score=42.02 Aligned_cols=97 Identities=16% Similarity=0.246 Sum_probs=52.8
Q ss_pred EEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCC
Q 014650 116 SISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGA 195 (421)
Q Consensus 116 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (421)
+...++..++.|+. -..+.+||..+.+-... +........+...+ +.+++.|+.+
T Consensus 138 ~~~~d~~~l~~g~~--------------dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~--~~~l~sg~~d------- 192 (435)
T 1p22_A 138 CLQYDDQKIVSGLR--------------DNTIKIWDKNTLECKRI--LTGHTGSVLCLQYD--ERVIITGSSD------- 192 (435)
T ss_dssp EEECCSSEEEEEES--------------SSCEEEEESSSCCEEEE--ECCCSSCEEEEECC--SSEEEEEETT-------
T ss_pred EEEECCCEEEEEeC--------------CCeEEEEeCCCCeEEEE--EcCCCCcEEEEEEC--CCEEEEEcCC-------
Confidence 34447777777774 24688999877653322 22222223334445 7777888764
Q ss_pred CCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 196 AGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 196 ~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+++-... +........++... +..++.|+.++.
T Consensus 193 -----g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~--~~~l~s~s~dg~ 234 (435)
T 1p22_A 193 -----STVRVWDVNTGEMLNT--LIHHCEAVLHLRFN--NGMMVTCSKDRS 234 (435)
T ss_dssp -----SCEEEEESSSCCEEEE--ECCCCSCEEEEECC--TTEEEEEETTSC
T ss_pred -----CeEEEEECCCCcEEEE--EcCCCCcEEEEEEc--CCEEEEeeCCCc
Confidence 2488899988764322 11111122333333 456666766543
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.20 E-value=1.8 Score=39.52 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=49.1
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
.++.+|+.+.+...+...... ...+-+..- +..||+.+.... . ...-.+|.+|..+.+.+.+...
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~-----~p~~l~~spdg~~l~~~~~~~~-~--------~~~v~~~~~~~~~g~~~~~~~~ 95 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVA-----NPSYLIPSADGKFVYSVNEFSK-D--------QAAVSAFAFDKEKGTLHLLNTQ 95 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECS-----CCCSEEECTTSSEEEEEECCSS-T--------TCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCC-----CCceEEECCCCCEEEEEEccCC-C--------CCcEEEEEEeCCCCcEEEeeEe
Confidence 356778888888766443111 111222222 445777665310 0 0122345556666777776655
Q ss_pred CCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 164 ISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 164 ~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
+..-.......++. ..||+.+.. ...+.+|+..++
T Consensus 96 ~~~~~~p~~~~~dg-~~l~~~~~~------------~~~v~~~~~~~~ 130 (361)
T 3scy_A 96 KTMGADPCYLTTNG-KNIVTANYS------------GGSITVFPIGQD 130 (361)
T ss_dssp ECSSSCEEEEEECS-SEEEEEETT------------TTEEEEEEBCTT
T ss_pred ccCCCCcEEEEECC-CEEEEEECC------------CCEEEEEEeCCC
Confidence 43222222222241 557766542 134777887643
No 75
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.19 E-value=0.38 Score=44.17 Aligned_cols=101 Identities=7% Similarity=0.033 Sum_probs=54.4
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCC-ccceEEEEEccCCEEEEEcCCccccccCCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISP-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (421)
++.+++.||.+ ..+.+||..+.+|.....+..+ ...-.++.+..++..++.|+.+
T Consensus 27 ~g~~las~~~D--------------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---------- 82 (345)
T 3fm0_A 27 AGTLLASCGGD--------------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---------- 82 (345)
T ss_dssp TSSCEEEEETT--------------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT----------
T ss_pred CCCEEEEEcCC--------------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC----------
Confidence 56677777742 3578888888877543322222 1222333343226777777754
Q ss_pred ccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 199 RISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 199 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+..++.+..+........++.+..++++.+.|+.++.
T Consensus 83 --~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 83 --ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp --SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred --CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCe
Confidence 2367788777766544333222222334444333677777776553
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.16 E-value=1.2 Score=40.69 Aligned_cols=89 Identities=9% Similarity=0.072 Sum_probs=49.4
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
..+.+||....+++.+..+......-.++.+..+ +.+++.|+.+ ..+.+||..+++|..+..+...
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~~~~ 100 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------------GKVLIWKEENGRWSQIAVHAVH 100 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------------SCEEEEEEETTEEEEEEEECCC
T ss_pred CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------------CEEEEEEcCCCceeEeeeecCC
Confidence 3588888876666665544433222333333211 4566666653 2488899999987765444333
Q ss_pred CCCeeEEEEccC--CeEEEEeccCC
Q 014650 223 RAGCVGFVAEES--GEFWVMGGYGD 245 (421)
Q Consensus 223 r~~~~~~~~~~~--~~iyv~GG~~~ 245 (421)
.....++.+..+ +.+++.|+.++
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CcceEEEEeCCCCCCCEEEEecCCC
Confidence 333344444433 45666666554
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.16 E-value=1.4 Score=38.13 Aligned_cols=82 Identities=9% Similarity=-0.061 Sum_probs=41.4
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||+.+.......... ...-++++...+ +++|+... + ..+.+||+.......+.... ..
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~-g~l~v~~~-~------------~~i~~~d~~~~~~~~~~~~~--~~ 108 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGA-GTVYVTDF-N------------NRVVTLAAGSNNQTVLPFDG--LN 108 (270)
T ss_dssp CEEEEECC-----EECCCCS-CCSCCCEEECTT-CCEEEEET-T------------TEEEEECTTCSCCEECCCCS--CS
T ss_pred CcEEEecCCCcccceEeeCC-cCCcceeEECCC-CCEEEEcC-C------------CEEEEEeCCCceEeeeecCC--cC
Confidence 46889998776654433211 111223444332 78888865 2 24788998887654443211 11
Q ss_pred CeeEEEEccCCeEEEEecc
Q 014650 225 GCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~ 243 (421)
...++++..+++||+....
T Consensus 109 ~p~~i~~~~~g~l~v~~~~ 127 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG 127 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG
T ss_pred CCcceEECCCCCEEEEECC
Confidence 2334555534789987543
No 78
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.15 E-value=2 Score=40.00 Aligned_cols=136 Identities=10% Similarity=0.117 Sum_probs=68.7
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
..+++.+.+ ..+..||..+++.......... ..-.+++.. ++.++++|+. ...+.+|
T Consensus 104 ~~l~~~~~d---~~v~lw~~~~~~~~~~~~~~~~-----~~v~~v~~s~~~~~l~~~~~--------------dg~i~iw 161 (401)
T 4aez_A 104 LNVVAVALE---RNVYVWNADSGSVSALAETDES-----TYVASVKWSHDGSFLSVGLG--------------NGLVDIY 161 (401)
T ss_dssp TSEEEEEET---TEEEEEETTTCCEEEEEECCTT-----CCEEEEEECTTSSEEEEEET--------------TSCEEEE
T ss_pred CCEEEEECC---CeEEEeeCCCCcEeEeeecCCC-----CCEEEEEECCCCCEEEEECC--------------CCeEEEE
Confidence 334444432 3488999988887655333211 111222222 5566666664 2358899
Q ss_pred eCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEE
Q 014650 151 NFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFV 230 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~ 230 (421)
|..+.+-... +........++..+ +.+++.|+.+ ..+.+||..+..-.. ..+........++.
T Consensus 162 d~~~~~~~~~--~~~~~~~v~~~~~~--~~~l~~~~~d------------g~i~i~d~~~~~~~~-~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 162 DVESQTKLRT--MAGHQARVGCLSWN--RHVLSSGSRS------------GAIHHHDVRIANHQI-GTLQGHSSEVCGLA 224 (401)
T ss_dssp ETTTCCEEEE--ECCCSSCEEEEEEE--TTEEEEEETT------------SEEEEEETTSSSCEE-EEEECCSSCEEEEE
T ss_pred ECcCCeEEEE--ecCCCCceEEEEEC--CCEEEEEcCC------------CCEEEEecccCccee-eEEcCCCCCeeEEE
Confidence 9887653322 22222233344445 6677777753 347888887433111 01111111223344
Q ss_pred EccCCeEEEEeccCCC
Q 014650 231 AEESGEFWVMGGYGDS 246 (421)
Q Consensus 231 ~~~~~~iyv~GG~~~~ 246 (421)
+..++.+++.|+.++.
T Consensus 225 ~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 225 WRSDGLQLASGGNDNV 240 (401)
T ss_dssp ECTTSSEEEEEETTSC
T ss_pred EcCCCCEEEEEeCCCe
Confidence 4333677777776553
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.14 E-value=0.87 Score=40.76 Aligned_cols=88 Identities=8% Similarity=0.084 Sum_probs=42.7
Q ss_pred eEEEEeCccCcee-eccccC--CCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 146 SAFRFNFLTFSWE-RIAPMI--SPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 146 ~v~~yd~~t~~W~-~~~~~~--~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
.+.+||..+.... .+..+. ........+.+..+++.+++|+.+ ..+.+||..+.+......+...
T Consensus 73 ~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~ 140 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA------------STLSIWDLAAPTPRIKAELTSS 140 (337)
T ss_dssp EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS------------SEEEEEECCCC--EEEEEEECS
T ss_pred eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC------------CcEEEEECCCCCcceeeecccC
Confidence 5888888775422 111111 112222333333226666666643 3588899988875443332222
Q ss_pred CCCeeEEEEccCCeEEEEeccCC
Q 014650 223 RAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 223 r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.....++.+..+++.++.|+.++
T Consensus 141 ~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 141 APACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS
T ss_pred CCceEEEEECCCCCEEEEEeCCC
Confidence 22233444433366777776554
No 80
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.10 E-value=0.78 Score=41.27 Aligned_cols=53 Identities=8% Similarity=-0.040 Sum_probs=27.6
Q ss_pred CeEEEEeCc--cCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECC
Q 014650 145 DSAFRFNFL--TFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVA 209 (421)
Q Consensus 145 ~~v~~yd~~--t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~ 209 (421)
..+.+|+.. +.+++.+..++....-..++...++..+|+.+..+ ..+.+||..
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------------~~i~~~d~~ 114 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------------GNVSVTRLE 114 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------------TEEEEEEEE
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------------CeEEEEECC
Confidence 457777665 77777665554333223333332213466665421 247777773
No 81
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.02 E-value=2.5 Score=41.99 Aligned_cols=72 Identities=13% Similarity=0.229 Sum_probs=44.8
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeC-ccCc--eeeccccCCC--------ccceEEEEEccCCEEEE
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNF-LTFS--WERIAPMISP--------RGSFACAAVRSLNQIIV 183 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~-~t~~--W~~~~~~~~~--------r~~~~~~~~~~~~~iyv 183 (421)
+.++.++.||+.... ...++.+|. .|.+ |+.-...... ....+.++.+ ++||+
T Consensus 57 ~P~v~~g~vyv~~~~--------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v 120 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF--------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGA--GQIVK 120 (571)
T ss_dssp CCEEETTEEEEECST--------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEET--TEEEE
T ss_pred ccEEECCEEEEEeCC--------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEEC--CEEEE
Confidence 345679999988652 135888988 6654 8764332111 1122345566 88988
Q ss_pred EcCCccccccCCCCCccceEEEEECCCCc--eEE
Q 014650 184 AGGGSRHSLFGAAGSRISSVERYDVAKNE--WVS 215 (421)
Q Consensus 184 ~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~ 215 (421)
.... ..+..+|.++.+ |+.
T Consensus 121 ~~~d-------------g~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 121 KQAN-------------GHLLALDAKTGKINWEV 141 (571)
T ss_dssp ECTT-------------SEEEEEETTTCCEEEEE
T ss_pred EeCC-------------CEEEEEECCCCCEEEEe
Confidence 7541 248889998875 875
No 82
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.87 E-value=1.2 Score=40.08 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=55.5
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe----CCEEEEEcccccCCCCCCCCCCCCCC
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL----GPYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
..+++...+.+ ..+..||..+++...+..+... ......+.. ++.+++.|+.+ .
T Consensus 24 ~g~~lasgs~D---~~v~lwd~~~~~~~~~~~l~gH-----~~~V~~v~~~~~~~~~~l~s~s~D--------------~ 81 (316)
T 3bg1_A 24 YGTRLATCSSD---RSVKIFDVRNGGQILIADLRGH-----EGPVWQVAWAHPMYGNILASCSYD--------------R 81 (316)
T ss_dssp GGCEEEEEETT---TEEEEEEEETTEEEEEEEEECC-----SSCEEEEEECCGGGSSCEEEEETT--------------S
T ss_pred CCCEEEEEeCC---CeEEEEEecCCCcEEEEEEcCC-----CccEEEEEeCCCCCCCEEEEEECC--------------C
Confidence 34445444443 3466788766544332222211 111122222 25566677642 3
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCCccceEEEEECCCC-ceEE
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN-EWVS 215 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~-~W~~ 215 (421)
.+.+||..+.+|..+..+..-...-.++.+..+ +.+++.|+.+ ..+.+||..+. .|..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D------------~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD------------GAISLLTYTGEGQWEV 142 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS------------SCEEEEEECSSSCEEE
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC------------CCEEEEecCCCCCcce
Confidence 588899988777655443322222223333221 4566777754 23667777665 4654
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.85 E-value=1.5 Score=39.34 Aligned_cols=94 Identities=6% Similarity=-0.023 Sum_probs=46.3
Q ss_pred cCCceEEEeCCCCCCCccEEEeCCCCcE--EECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCC
Q 014650 69 SQSDLLCIFPQDPSISSPFLFDAANRAC--RPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPS 144 (421)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~d~~~~~W--~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~ 144 (421)
...+.+|+.+.. ...++.+|+.+.+. ..+..-.. ..++++.. +++|| .+... + ..
T Consensus 49 ~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~-~~~~~--~---------~~ 107 (331)
T 3u4y_A 49 SDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQEGQS-------SMADVDITPDDQFAV-TVTGL--N---------HP 107 (331)
T ss_dssp SSSCEEEEEEST--TCEEEEEECSSSSCEEEEEEECSS-------CCCCEEECTTSSEEE-ECCCS--S---------SS
T ss_pred CCCCEEEEEeCC--CCeEEEEECCCCceeEEecccCCC-------CccceEECCCCCEEE-EecCC--C---------Cc
Confidence 345556665542 23688999988764 22211111 11212222 45677 33321 0 11
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCC-EEEEEcC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLN-QIIVAGG 186 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~-~iyv~GG 186 (421)
..+++||..+.+-... ++.....+.++...+ + .+|+.+.
T Consensus 108 ~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spd-g~~l~~~~~ 147 (331)
T 3u4y_A 108 FNMQSYSFLKNKFIST--IPIPYDAVGIAISPN-GNGLILIDR 147 (331)
T ss_dssp CEEEEEETTTTEEEEE--EECCTTEEEEEECTT-SSCEEEEEE
T ss_pred ccEEEEECCCCCeEEE--EECCCCccceEECCC-CCEEEEEec
Confidence 2799999988765443 222222234443332 4 5887755
No 84
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.82 E-value=1.9 Score=38.77 Aligned_cols=98 Identities=12% Similarity=0.068 Sum_probs=54.7
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.||+.+.. ...+++||+.+.+.+.+.... .. .....++..++++|+.+... ...
T Consensus 55 ~g~l~~~~~~--------------~~~i~~~d~~~~~~~~~~~~~-~~-~~~~i~~~~dg~l~v~~~~~--------~~~ 110 (333)
T 2dg1_A 55 QGQLFLLDVF--------------EGNIFKINPETKEIKRPFVSH-KA-NPAAIKIHKDGRLFVCYLGD--------FKS 110 (333)
T ss_dssp TSCEEEEETT--------------TCEEEEECTTTCCEEEEEECS-SS-SEEEEEECTTSCEEEEECTT--------SSS
T ss_pred CCCEEEEECC--------------CCEEEEEeCCCCcEEEEeeCC-CC-CcceEEECCCCcEEEEeCCC--------CCC
Confidence 5778887653 246999999998877654211 11 22233333227888876432 112
Q ss_pred cceEEEEECCCCceEE-CCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 200 ISSVERYDVAKNEWVS-MDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
...+.+||+++...+. +.... .......+.+..++.+|+...
T Consensus 111 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 111 TGGIFAATENGDNLQDIIEDLS-TAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CCEEEEECTTSCSCEEEECSSS-SCCCEEEEEECTTSCEEEEEC
T ss_pred CceEEEEeCCCCEEEEEEccCc-cCCcccceEECCCCCEEEEec
Confidence 2468899998887653 22211 111233444544478888643
No 85
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.77 E-value=1.9 Score=39.24 Aligned_cols=144 Identities=10% Similarity=0.073 Sum_probs=69.3
Q ss_pred CCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 70 QSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 70 ~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
...++...+.+ ..+..||..+++|.....+... .......+.. ++..++.|+.+ ..+
T Consensus 27 ~g~~las~~~D---~~i~iw~~~~~~~~~~~~~~~~----h~~~v~~~~~sp~g~~l~s~s~D--------------~~v 85 (345)
T 3fm0_A 27 AGTLLASCGGD---RRIRIWGTEGDSWICKSVLSEG----HQRTVRKVAWSPCGNYLASASFD--------------ATT 85 (345)
T ss_dssp TSSCEEEEETT---SCEEEEEEETTEEEEEEEECSS----CSSCEEEEEECTTSSEEEEEETT--------------SCE
T ss_pred CCCEEEEEcCC---CeEEEEEcCCCcceeeeeeccc----cCCcEEEEEECCCCCEEEEEECC--------------CcE
Confidence 44455554443 2367788877776532212110 0111222222 56666677642 347
Q ss_pred EEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc-eEECCCCCCCCCCe
Q 014650 148 FRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE-WVSMDEMPRFRAGC 226 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r~~~ 226 (421)
.+||..+..+..+..+..-.....++.+..++++++.|+.+ ..+.+||..+.. +..+..+.......
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D------------~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD------------KSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT------------SCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC------------CeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 77787776665544443222223333443226777777754 237778876643 32222221111122
Q ss_pred eEEEEccCCeEEEEeccCCC
Q 014650 227 VGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 227 ~~~~~~~~~~iyv~GG~~~~ 246 (421)
.++....++.+.+.|+.++.
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDT 173 (345)
T ss_dssp EEEEECSSSSCEEEEETTSC
T ss_pred EEEEECCCCCEEEEEeCCCc
Confidence 33444333667777776553
No 86
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.72 E-value=2.3 Score=38.39 Aligned_cols=50 Identities=14% Similarity=0.343 Sum_probs=27.7
Q ss_pred ceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEec
Q 014650 332 RWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIF 400 (421)
Q Consensus 332 ~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~ 400 (421)
.|..+..++... ...-.+++...+.+++.||.++ .|.+||..+++|..+.
T Consensus 238 ~~~~~~~~~~~h-~~~v~~v~~s~~~~l~s~~~dg------------------~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 238 EWVCEAILPDVH-KRQVYNVAWGFNGLIASVGADG------------------VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEEEEECCSCC-SSCEEEEEECTTSCEEEEETTS------------------CEEEEEEETTEEEEEE
T ss_pred eeEEeeeccccc-ccceEEEEEcCCCEEEEEeCCC------------------EEEEEEcCCCceEEEe
Confidence 465554443211 1122333333556667777653 5778888888886654
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.60 E-value=0.93 Score=46.67 Aligned_cols=89 Identities=9% Similarity=0.072 Sum_probs=51.5
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
..+.+||..+.++..+..+......-.++.+..+ +..++.|+.+ ..+.+||..+++|..+..+...
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------------g~I~vwd~~~~~~~~~~~~~~h 98 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------------GKVLIWKEENGRWSQIAVHAVH 98 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------------SCEEEEEEETTEEEEEEEECCC
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------------CeEEEEECCCCcccccccccCC
Confidence 4688888887777766555433333334444221 4566666654 2488899999887665444333
Q ss_pred CCCeeEEEEccC--CeEEEEeccCC
Q 014650 223 RAGCVGFVAEES--GEFWVMGGYGD 245 (421)
Q Consensus 223 r~~~~~~~~~~~--~~iyv~GG~~~ 245 (421)
.....++.+..+ +.+++.|+.++
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCC
Confidence 333344444432 56777777654
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.37 E-value=2.5 Score=38.85 Aligned_cols=93 Identities=10% Similarity=0.084 Sum_probs=46.2
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe----CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeec
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL----GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERI 160 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~ 160 (421)
.+..||..+.+-...-..+.+ ..++... ++.+++.|+. ...+.+||..+.+-..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~d~~~~~~~~- 180 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET-------VYSHHMSPVSTKHCLVAVGTR--------------GPKVQLCDLKSGSCSH- 180 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC-------EEEEEECSSCSSCCEEEEEES--------------SSSEEEEESSSSCCCE-
T ss_pred eEEEeeCCCCccceeccCCCc-------eeeeEeecCCCCCcEEEEEcC--------------CCeEEEEeCCCcceee-
Confidence 477888887665443333221 1122221 3346666663 2458889987654321
Q ss_pred cccCCCccceEEEEEccCCE-EEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 161 APMISPRGSFACAAVRSLNQ-IIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 161 ~~~~~~r~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
.+........+..+..++. +++.|+.+ ..+.+||..+..
T Consensus 181 -~~~~~~~~v~~~~~~~~~~~ll~~~~~d------------g~i~i~d~~~~~ 220 (408)
T 4a11_B 181 -ILQGHRQEILAVSWSPRYDYILATASAD------------SRVKLWDVRRAS 220 (408)
T ss_dssp -EECCCCSCEEEEEECSSCTTEEEEEETT------------SCEEEEETTCSS
T ss_pred -eecCCCCcEEEEEECCCCCcEEEEEcCC------------CcEEEEECCCCC
Confidence 1221222223333322133 67777754 237788887653
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.34 E-value=1.8 Score=39.82 Aligned_cols=89 Identities=4% Similarity=-0.009 Sum_probs=46.8
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEcc-CCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRS-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 223 (421)
..+.+||..+.+....-..........++.+.. ++.+++.|+.+ ..+.+||..+.....+.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------------GATTLRDFSGSVIQVFAKTDSWD 163 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------------TEEEEEETTSCEEEEEECCCCSS
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------------CEEEEEECCCCceEEEeccCCCC
Confidence 358889988877655433222222223333321 15677777653 34788998877665543322211
Q ss_pred CCeeEEEEccCCeEEEEeccCC
Q 014650 224 AGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 224 ~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
....++.+..++.+.+.|+.++
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~ 185 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTG 185 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTS
T ss_pred CCeEEEEECCCCCEEEEECCCC
Confidence 2223333333366777776654
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.05 E-value=3.2 Score=37.41 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=28.4
Q ss_pred ceEEEeCCCCceeEecccCCCCCCCCceEEE-EeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCccee
Q 014650 322 DILRYDMGLNRWLKETTIPEIRPCKKPLGFI-VLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTW 396 (421)
Q Consensus 322 ~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 396 (421)
.+.+||..+.+=.. .+... ...-.+++ .-++++++.|+.++ .|.+||.+++..
T Consensus 296 ~i~~~d~~~~~~~~--~~~~~--~~~v~~~~~s~~~~~l~s~~~dg------------------~v~iw~~~~~~~ 349 (369)
T 3zwl_B 296 EARFYHKIFEEEIG--RVQGH--FGPLNTVAISPQGTSYASGGEDG------------------FIRLHHFEKSYF 349 (369)
T ss_dssp EEEEEETTTCCEEE--EEECC--SSCEEEEEECTTSSEEEEEETTS------------------EEEEEEECHHHH
T ss_pred eeEEEecCCCcchh--heecc--cCcEEEEEECCCCCEEEEEcCCC------------------eEEEEECccccc
Confidence 57888877654222 22210 01112222 22678888887663 577787766543
No 91
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.04 E-value=3 Score=36.92 Aligned_cols=65 Identities=11% Similarity=0.094 Sum_probs=36.5
Q ss_pred CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccC--CEEEEEcCCccccccCCCCC
Q 014650 121 PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL--NQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 121 ~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~ 198 (421)
+.+++.|+.+ ..+.+||..+.+|..+..+........++.+..+ +.+++.|+.+
T Consensus 67 g~~l~s~s~D--------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d---------- 122 (297)
T 2pm7_B 67 GTILASCSYD--------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD---------- 122 (297)
T ss_dssp CSEEEEEETT--------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT----------
T ss_pred CCEEEEEcCC--------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC----------
Confidence 5667777642 4688999988887665544322222233333211 3466666653
Q ss_pred ccceEEEEECCCC
Q 014650 199 RISSVERYDVAKN 211 (421)
Q Consensus 199 ~~~~~~~yd~~t~ 211 (421)
..+.+||..+.
T Consensus 123 --~~v~~wd~~~~ 133 (297)
T 2pm7_B 123 --GKVSVVEFKEN 133 (297)
T ss_dssp --SEEEEEEBCSS
T ss_pred --CcEEEEEecCC
Confidence 23667777654
No 92
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.04 E-value=2.2 Score=39.14 Aligned_cols=99 Identities=11% Similarity=0.078 Sum_probs=48.8
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEE-ccCCEEEEEcCCccccccCCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAV-RSLNQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~ 198 (421)
++..++.|+.+ ..+.+||..+.+-.. .+......-.++.+ .+.+.+++.|+.+
T Consensus 150 dg~~l~sgs~d--------------g~v~iwd~~~~~~~~--~~~~h~~~v~~v~~s~~~~~~~~s~~~d---------- 203 (357)
T 4g56_B 150 DGTQAVSGGKD--------------FSVKVWDLSQKAVLK--SYNAHSSEVNCVAACPGKDTIFLSCGED---------- 203 (357)
T ss_dssp SSSEEEEEETT--------------SCEEEEETTTTEEEE--EECCCSSCEEEEEECTTCSSCEEEEETT----------
T ss_pred CCCEEEEEeCC--------------CeEEEEECCCCcEEE--EEcCCCCCEEEEEEccCCCceeeeeccC----------
Confidence 56666777642 358889988765332 22211112222222 2113466677653
Q ss_pred ccceEEEEECCCCceEECCCCCCCCCCeeEEEEc-cCCeEEEEeccCCC
Q 014650 199 RISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAE-ESGEFWVMGGYGDS 246 (421)
Q Consensus 199 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~~iyv~GG~~~~ 246 (421)
..+.+||..+.+-..............++.+. +++.+++.|+.++.
T Consensus 204 --g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~ 250 (357)
T 4g56_B 204 --GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN 250 (357)
T ss_dssp --SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC
T ss_pred --CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc
Confidence 23778888876533222222222222333332 22567777776553
No 93
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.03 E-value=2 Score=38.87 Aligned_cols=89 Identities=7% Similarity=0.053 Sum_probs=42.7
Q ss_pred CeEEEEeCcc--CceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 145 DSAFRFNFLT--FSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
..+.+||..+ ..++.+..+..-...-..+.+..++.+++.|+.+ ..+.++|..+..|+.+..+...
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D------------~~i~iW~~~~~~~~~~~~~~~h 196 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD------------DTVRIWKDYDDDWECVAVLNGH 196 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT------------SCEEEEEEETTEEEEEEEECCC
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC------------CeEEEEECCCCCeeEEEEccCC
Confidence 3578888733 3344443332222222333333226677777754 2367788777777654433222
Q ss_pred CCCeeEEEEccC--CeEEEEeccCC
Q 014650 223 RAGCVGFVAEES--GEFWVMGGYGD 245 (421)
Q Consensus 223 r~~~~~~~~~~~--~~iyv~GG~~~ 245 (421)
.....++.+..+ +...+.|+.++
T Consensus 197 ~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 197 EGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp SSCEEEEEECCSSSSCEEEEEETTS
T ss_pred CCcEEEEEecCCCCeeEEEEEeCCC
Confidence 212223333221 33455666554
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.88 E-value=3.9 Score=37.67 Aligned_cols=42 Identities=2% Similarity=0.037 Sum_probs=20.5
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.+.+||..+.+-... +........++.+..++.+++.|+.++
T Consensus 228 ~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 228 AIFVYQITEKTPTGK--LIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp CEEEEETTCSSCSEE--ECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred eEEEEEcCCCceeee--eccCCCceEEEEECCCCCEEEEEcCCC
Confidence 488899887642211 111111222333332366777776554
No 95
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.86 E-value=3.2 Score=36.60 Aligned_cols=91 Identities=11% Similarity=0.122 Sum_probs=51.1
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.||+++.. ...+++||+.+. .+.+.. +. ......++..++++|+....
T Consensus 39 g~~l~~~~~~--------------~~~i~~~~~~~~-~~~~~~-~~--~~~~~l~~~~dg~l~v~~~~------------ 88 (296)
T 3e5z_A 39 RSAVIFSDVR--------------QNRTWAWSDDGQ-LSPEMH-PS--HHQNGHCLNKQGHLIACSHG------------ 88 (296)
T ss_dssp GTEEEEEEGG--------------GTEEEEEETTSC-EEEEES-SC--SSEEEEEECTTCCEEEEETT------------
T ss_pred CCEEEEEeCC--------------CCEEEEEECCCC-eEEEEC-CC--CCcceeeECCCCcEEEEecC------------
Confidence 3458888764 246999999987 555432 11 12223333222788877542
Q ss_pred cceEEEEECCCCceEECCCCCC-C-CCCeeEEEEccCCeEEEE
Q 014650 200 ISSVERYDVAKNEWVSMDEMPR-F-RAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~-~-r~~~~~~~~~~~~~iyv~ 240 (421)
...+.+||+.+++.+.+..... . ......+++..++.||+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 2358899998888766532111 1 111123444444889987
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.83 E-value=4.1 Score=37.73 Aligned_cols=100 Identities=7% Similarity=0.014 Sum_probs=50.6
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceee-----ccccCCCccceEEEEEccCC-EEEEEcCCcccccc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWER-----IAPMISPRGSFACAAVRSLN-QIIVAGGGSRHSLF 193 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-----~~~~~~~r~~~~~~~~~~~~-~iyv~GG~~~~~~~ 193 (421)
++.+++.|+.+ ..+.+||..+..... +..+........++.+..++ .+++.|+.+
T Consensus 93 ~~~~l~s~s~d--------------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d----- 153 (402)
T 2aq5_A 93 NDNVIASGSED--------------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD----- 153 (402)
T ss_dssp CTTEEEEEETT--------------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----
T ss_pred CCCEEEEEeCC--------------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----
Confidence 56677777642 468889988765421 22222112222333333213 577777753
Q ss_pred CCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 194 GAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 194 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
..+.+||..+.+....-..........++.+..++.+++.|+.++
T Consensus 154 -------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 154 -------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp -------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS
T ss_pred -------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC
Confidence 248889998876543211011111223344432366667776554
No 97
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.80 E-value=4.2 Score=41.25 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=44.8
Q ss_pred EEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeeccccCCC--------ccceEEEEEccCCEEEEEc
Q 014650 116 SISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIAPMISP--------RGSFACAAVRSLNQIIVAG 185 (421)
Q Consensus 116 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~~~iyv~G 185 (421)
.++.++.||+.... ..++.+|..|.+ |+.-...+.. ....+.++.+ ++||+..
T Consensus 73 P~v~~g~vyv~~~~---------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~v~v~~ 135 (677)
T 1kb0_A 73 PVVVDGIMYVSASW---------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK--GKVYVGA 135 (677)
T ss_dssp CEEETTEEEEECGG---------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET--TEEEEEC
T ss_pred CEEECCEEEEECCC---------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC--CEEEEEc
Confidence 45679999988752 358888877654 8764432210 1122445566 8888864
Q ss_pred CCccccccCCCCCccceEEEEECCCCc--eEEC
Q 014650 186 GGSRHSLFGAAGSRISSVERYDVAKNE--WVSM 216 (421)
Q Consensus 186 G~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~ 216 (421)
.. ..+..+|.++++ |+.-
T Consensus 136 ~d-------------g~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 136 WD-------------GRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TT-------------SEEEEEETTTCCEEEEEE
T ss_pred CC-------------CEEEEEECCCCCEEeeec
Confidence 31 348889998876 8763
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.79 E-value=4.6 Score=38.17 Aligned_cols=66 Identities=12% Similarity=-0.003 Sum_probs=36.7
Q ss_pred CceEEEeC--C-CCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceee
Q 014650 321 FDILRYDM--G-LNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWR 397 (421)
Q Consensus 321 ~~v~~yd~--~-~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 397 (421)
..|.+||. . ..++..+..+... ....+++...+.+++..+...... -......++.++.++++|+
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~~~~~v~~~~~~~~~---------~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP---YNVISLSAHNDEFQVTLDNKESSG---------VQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS---SCEEEEEEETTEEEEEECCTTCCS---------SCCCSEEEEEEETTTTEEE
T ss_pred CeEEEEEeccCCCCceeeccEeccC---CceEEEEecCCcEEEEEecccCCC---------CCCcceEEEEEEcCCCeEE
Confidence 46777777 2 3456666555432 133455566677877765432110 0011247788888888885
Q ss_pred E
Q 014650 398 Y 398 (421)
Q Consensus 398 ~ 398 (421)
.
T Consensus 398 ~ 398 (450)
T 2vdu_B 398 V 398 (450)
T ss_dssp E
T ss_pred E
Confidence 3
No 99
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=93.70 E-value=0.026 Score=56.44 Aligned_cols=36 Identities=17% Similarity=0.591 Sum_probs=29.1
Q ss_pred ccCCCChHHHHHHHhcCCC-cchhHHHHhhhHhHHhh
Q 014650 19 TLIPGLPNDVASLILAFVP-YSHQSRLKQTCRSWFLF 54 (421)
Q Consensus 19 ~~~~~Lp~dl~~~~l~~lp-~~~~~~~~~v~k~W~~l 54 (421)
.+|..||+|++.+||+++| ..+..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4678899999999999999 89999999999999988
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.46 E-value=4.8 Score=38.01 Aligned_cols=83 Identities=6% Similarity=0.049 Sum_probs=40.9
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+-.. .+.........+.+..++..++.|+.+ ..+.+||..+.+-... +.....
T Consensus 290 ~~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~sg~~d------------g~i~vwd~~~~~~~~~--~~~h~~ 353 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLY--ILSGHTDRIYSTIYDHERKRCISASMD------------TTIRIWDLENGELMYT--LQGHTA 353 (464)
T ss_dssp SCEEEEETTTTEEEE--EECCCSSCEEEEEEETTTTEEEEEETT------------SCEEEEETTTTEEEEE--ECCCSS
T ss_pred CeEEEEECCCCcEEE--EecCCCCCEEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCcEEEE--EeCCCC
Confidence 358889987654322 122112222222332225666677653 2488899988763321 111111
Q ss_pred CeeEEEEccCCeEEEEeccCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~ 245 (421)
...++... +...+.|+.++
T Consensus 354 ~v~~~~~~--~~~l~s~s~dg 372 (464)
T 3v7d_B 354 LVGLLRLS--DKFLVSAAADG 372 (464)
T ss_dssp CEEEEEEC--SSEEEEEETTS
T ss_pred cEEEEEEc--CCEEEEEeCCC
Confidence 22333443 56667776654
No 101
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.45 E-value=8 Score=39.84 Aligned_cols=122 Identities=7% Similarity=0.024 Sum_probs=65.2
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEE-eCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc-
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSIS-LGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP- 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~- 162 (421)
-+.+||+.++++..+....... . ..-.+++. .++.|++... ..+++||+.++++..+..
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~--~-~~i~~i~~d~~g~lwi~t~----------------~gl~~~~~~~~~~~~~~~~ 168 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGK--H-LQVNGIEEISPEQLLISTP----------------EGLIMFDIKESKFIDDSFS 168 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTE--E-CCCCEEEEEETTEEEEEET----------------TEEEEEETTTTEEECSSSC
T ss_pred chheeCCCCCeEEeccccccCC--C-ceEEEEEECCCCCEEEEEC----------------CceEEEECCCCEEEeccCC
Confidence 4789999998887764322110 0 00122333 3678887532 358999999888776543
Q ss_pred cCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEE
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~ 240 (421)
.+....-.++....+ +.|++.... ..+.+||+.+++++.....+. .....++....++.|++.
T Consensus 169 ~~~~~~i~~i~~d~~-g~lwigt~~-------------~Gl~~~~~~~~~~~~~~~~~~-~~~i~~i~~d~~g~lwig 231 (795)
T 4a2l_A 169 TAMHKTIASTLYRQG-DQIYIGTST-------------DGLYTYSITQKTFEKVIPILG-TKQIQAILQQSPTRIWVA 231 (795)
T ss_dssp HHHHTCCEEEEEEET-TEEEEEESS-------------SCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEEE
T ss_pred CCCCcceEEEEECCC-CCEEEEECC-------------CCEEEEeCCCCeEEEecCCCC-CCeeEEEEEcCCCCEEEE
Confidence 111110122333222 788874211 127889999999887643321 112233444434778774
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.41 E-value=1.2 Score=42.10 Aligned_cols=101 Identities=13% Similarity=0.046 Sum_probs=51.3
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEc-cCCEEEEEcCCccccccCCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVR-SLNQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 198 (421)
++.+++.|+.+ ..|.+||..+.+-..+-.+......-.++.+. .++.+++.|+.+
T Consensus 131 ~~~~lasGs~d--------------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---------- 186 (435)
T 4e54_B 131 HPSTVAVGSKG--------------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---------- 186 (435)
T ss_dssp CTTCEEEEETT--------------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS----------
T ss_pred CCCEEEEEeCC--------------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC----------
Confidence 34577777742 35888888776543332221111111222221 115666777754
Q ss_pred ccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 199 RISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 199 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.++|.+++.-..+...........++.+..++++.+.|+.++.
T Consensus 187 --~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~ 232 (435)
T 4e54_B 187 --GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGN 232 (435)
T ss_dssp --SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSB
T ss_pred --CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCc
Confidence 2377889888765544332221111223333333777888876653
No 103
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.12 E-value=4.4 Score=35.90 Aligned_cols=86 Identities=10% Similarity=0.123 Sum_probs=42.7
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+....- .........+.+..++++++.|+.+ ..+.+||..+.+-... +.....
T Consensus 45 g~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~d------------~~i~vwd~~~~~~~~~--~~~~~~ 108 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTI--SGHKLGISDVAWSSDSNLLVSASDD------------KTLKIWDVSSGKCLKT--LKGHSN 108 (312)
T ss_dssp SCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT------------SEEEEEETTTCCEEEE--EECCSS
T ss_pred CeEEEEeCCCcccchhh--ccCCCceEEEEEcCCCCEEEEECCC------------CEEEEEECCCCcEEEE--EcCCCC
Confidence 35778888776654321 1111222233333226677777753 2478899887753221 111111
Q ss_pred CeeEEEEccCCeEEEEeccCCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
...++.+..++.+.+.|+.++.
T Consensus 109 ~v~~~~~~~~~~~l~s~~~d~~ 130 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSFDES 130 (312)
T ss_dssp CEEEEEECSSSSEEEEEETTSC
T ss_pred CEEEEEEcCCCCEEEEEeCCCc
Confidence 1223333333667777776553
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.04 E-value=4.3 Score=35.61 Aligned_cols=57 Identities=11% Similarity=0.170 Sum_probs=32.5
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEE-eCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEe
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIV-LDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYI 399 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i 399 (421)
..|.+||..+.+....-..+. ..-.+++. .+++ ++.|+.++ .|.+||.+++++...
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~----~~i~~~~~~~~~~-~~~~~~dg------------------~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA----ISIWSVDCMSNGD-IIVGSSDN------------------LVRIFSQEKSRWASE 302 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS----SCEEEEEECTTSC-EEEEETTS------------------CEEEEESCGGGCCC-
T ss_pred CEEEEEECCCCceeEEEeccC----ceEEEEEEccCCC-EEEEeCCC------------------cEEEEeCCCCceeeh
Confidence 468888888775444322222 11223332 3456 55676552 588999999888654
Q ss_pred c
Q 014650 400 F 400 (421)
Q Consensus 400 ~ 400 (421)
.
T Consensus 303 ~ 303 (313)
T 3odt_A 303 D 303 (313)
T ss_dssp -
T ss_pred h
Confidence 4
No 105
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.95 E-value=8.3 Score=39.44 Aligned_cols=127 Identities=9% Similarity=0.006 Sum_probs=62.3
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccC------ce
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTF------SW 157 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~------~W 157 (421)
-+.+||+.++++................-+++... ++.|+|- .. ..-+++||+.+. .+
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~--------------~~Gl~~~~~~~~~~~~~~~~ 457 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TC--------------LGGIFVVDKHKLMQSTSGQY 457 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ES--------------SSCEEEEEHHHHHHCCSSEE
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-EC--------------CCceEEEccccccccCCcce
Confidence 47889999988876531111000000112333333 4678763 21 123788887641 22
Q ss_pred e---e---ccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC-CCCeeEEE
Q 014650 158 E---R---IAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF-RAGCVGFV 230 (421)
Q Consensus 158 ~---~---~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~ 230 (421)
. . ...++... -.++.... ++.|++++|.. .-+.+||+.+++++.+..-... .....++.
T Consensus 458 ~~~~~~~~~~~l~~~~-i~~i~~d~-~g~lWi~~~t~------------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~ 523 (758)
T 3ott_A 458 IAEQNYSVHNGLSGMF-INQIIPDN-EGNVWVLLYNN------------KGIDKINPRTREVTKLFADELTGEKSPNYLL 523 (758)
T ss_dssp ECSEEECGGGTCSCSC-EEEEEECT-TSCEEEEETTC------------SSEEEEETTTTEEEEECTTTSCGGGCEEEEE
T ss_pred ecccccccccccccce-eeeEEEcC-CCCEEEEccCC------------CCcEEEeCCCCceEEecCCCcCCCcccceEE
Confidence 1 1 11122111 12222222 37888866642 2378899999998876321111 11233444
Q ss_pred EccCCeEEEE
Q 014650 231 AEESGEFWVM 240 (421)
Q Consensus 231 ~~~~~~iyv~ 240 (421)
...++.|++-
T Consensus 524 ~d~~g~lWig 533 (758)
T 3ott_A 524 CDEDGLLWVG 533 (758)
T ss_dssp ECTTSCEEEE
T ss_pred ECCCCCEEEE
Confidence 5445888864
No 106
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.81 E-value=4.9 Score=35.61 Aligned_cols=89 Identities=10% Similarity=0.133 Sum_probs=50.7
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.||++.-. ...+++||+.+.+..... ++. + ....+...++++|+..+
T Consensus 24 ~~~l~~~d~~--------------~~~i~~~d~~~~~~~~~~-~~~-~--~~~i~~~~dG~l~v~~~------------- 72 (297)
T 3g4e_A 24 SNSLLFVDIP--------------AKKVCRWDSFTKQVQRVT-MDA-P--VSSVALRQSGGYVATIG------------- 72 (297)
T ss_dssp TTEEEEEETT--------------TTEEEEEETTTCCEEEEE-CSS-C--EEEEEEBTTSSEEEEET-------------
T ss_pred CCEEEEEECC--------------CCEEEEEECCCCcEEEEe-CCC-c--eEEEEECCCCCEEEEEC-------------
Confidence 4788887642 357999999987654332 121 1 22223322267766532
Q ss_pred cceEEEEECCCCceEECCCCCC--CCCCeeEEEEccCCeEEEE
Q 014650 200 ISSVERYDVAKNEWVSMDEMPR--FRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~--~r~~~~~~~~~~~~~iyv~ 240 (421)
..+.+||+++++++.+..... +......+.+..+++||+.
T Consensus 73 -~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 73 -TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp -TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEE
T ss_pred -CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEe
Confidence 248899999998876543321 1112234445444788874
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.72 E-value=5.2 Score=40.97 Aligned_cols=107 Identities=8% Similarity=-0.016 Sum_probs=53.8
Q ss_pred ccCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEE-EeCCEEEEEcccccCCCCCCCCCCCCCCe
Q 014650 68 NSQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSI-SLGPYIYLLGGSHFDARSFPLDRPLPSDS 146 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 146 (421)
....+++.+.+.+ ..+..||..+.+....-.... ... .+++ .-++..+++|+. ...
T Consensus 22 sp~~~~la~~~~~---g~v~iwd~~~~~~~~~~~~~~-----~~v-~~~~~s~~~~~l~~~~~--------------dg~ 78 (814)
T 3mkq_A 22 HPTEPWVLTTLYS---GRVEIWNYETQVEVRSIQVTE-----TPV-RAGKFIARKNWIIVGSD--------------DFR 78 (814)
T ss_dssp CSSSSEEEEEETT---SEEEEEETTTTEEEEEEECCS-----SCE-EEEEEEGGGTEEEEEET--------------TSE
T ss_pred CCCCCEEEEEeCC---CEEEEEECCCCceEEEEecCC-----CcE-EEEEEeCCCCEEEEEeC--------------CCe
Confidence 3445666655443 347889987765433211111 011 1222 225556666664 246
Q ss_pred EEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 147 AFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 147 v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
+.+||..+.+....- ........++.+..++..++.|+.+ ..+.+||..++
T Consensus 79 i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d------------g~i~vw~~~~~ 129 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDD------------LTVKLWNWENN 129 (814)
T ss_dssp EEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETT------------SEEEEEEGGGT
T ss_pred EEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCC------------CEEEEEECCCC
Confidence 889998877653321 1111122233332225555566543 24788888776
No 108
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=92.70 E-value=5.9 Score=36.27 Aligned_cols=104 Identities=6% Similarity=-0.003 Sum_probs=52.0
Q ss_pred EEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc----eeeccccCCCccceEEEEEccC----C---EEEEEc
Q 014650 117 ISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS----WERIAPMISPRGSFACAAVRSL----N---QIIVAG 185 (421)
Q Consensus 117 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~----W~~~~~~~~~r~~~~~~~~~~~----~---~iyv~G 185 (421)
+.....+++.|+. -..+.+||..+.+ +..+..+......-.++.+..+ + .+++.|
T Consensus 22 ~~~~~~~l~s~~~--------------dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 22 VSACNSFTVSCSG--------------DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EEECSSEEEEEET--------------TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEecCCeEEEEcC--------------CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 3344466667764 2468888888766 3323222222222222233222 4 677777
Q ss_pred CCccccccCCCCCccceEEEEECCCCc------eEECCCCCCC--CCCeeEEEEc----cCCeE-EEEeccCCC
Q 014650 186 GGSRHSLFGAAGSRISSVERYDVAKNE------WVSMDEMPRF--RAGCVGFVAE----ESGEF-WVMGGYGDS 246 (421)
Q Consensus 186 G~~~~~~~~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~--r~~~~~~~~~----~~~~i-yv~GG~~~~ 246 (421)
+.+ ..+.+||..+.. +..+...+.. .....++.+. .++.. ++.|+.++.
T Consensus 88 ~~d------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~ 149 (397)
T 1sq9_A 88 SFS------------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGT 149 (397)
T ss_dssp ETT------------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSC
T ss_pred cCC------------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCc
Confidence 653 237788887776 6665443211 1223333333 22566 777776543
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.57 E-value=3.1 Score=37.32 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=49.9
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEc-c-CCEEEEEcCCccccccCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVR-S-LNQIIVAGGGSRHSLFGAAG 197 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~ 197 (421)
++..++.|+.+ ..+.+||..+.+...+..+..-...-..+.+. + ++.+++.|+.+
T Consensus 24 ~g~~lasgs~D--------------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D--------- 80 (316)
T 3bg1_A 24 YGTRLATCSSD--------------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD--------- 80 (316)
T ss_dssp GGCEEEEEETT--------------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---------
T ss_pred CCCEEEEEeCC--------------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---------
Confidence 45666677642 46888888766543333332211112223321 0 15566667654
Q ss_pred CccceEEEEECCCCceEECCCCCCCCCCeeEEEEcc--CCeEEEEeccCCC
Q 014650 198 SRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEE--SGEFWVMGGYGDS 246 (421)
Q Consensus 198 ~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~--~~~iyv~GG~~~~ 246 (421)
..+.+||..+..|..+..+........++.+.. .+.+.+.|+.++.
T Consensus 81 ---~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 81 ---RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp ---SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred ---CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 237888988877754332221111122333322 1456667766553
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.52 E-value=6.8 Score=36.57 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=52.8
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA 161 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 161 (421)
+.++.+|..+++...+-.+... ...-.++.. ++..++.|+.+ ..+.+||..+.+-..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~-----~~~V~sv~fspdg~~lasgs~D--------------g~v~iWd~~~~~~~~-- 183 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP-----GEYISSVAWIKEGNYLAVGTSS--------------AEVQLWDVQQQKRLR-- 183 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST-----TCCEEEEEECTTSSEEEEEETT--------------SCEEEEETTTTEEEE--
T ss_pred CEEEEEECCCCCEEEEEEecCC-----CCcEEEEEECCCCCEEEEEECC--------------CeEEEEEcCCCcEEE--
Confidence 3588999999887665344321 112222332 56677777742 458889988765322
Q ss_pred ccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 162 PMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
.+........+...+ +.+.+.|+.+ ..+..+|..+..
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d------------~~i~~~d~~~~~ 220 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRS------------GHIHHHDVRVAE 220 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETT------------SEEEEEETTSSS
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCC------------CceeEeeecccc
Confidence 222222233444556 7777777754 235666666543
No 111
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.50 E-value=6.2 Score=35.99 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=42.8
Q ss_pred CeEEEEeCccCceeecccc-CCC-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPM-ISP-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~-~~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
..|.+||..+++-...... ..+ ...-.++.+..+++.++.|+.+ ..+.++|..+++-... +...
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d------------~~i~iwd~~~~~~~~~--~~~h 168 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD------------ICIKVWDLAQQVVLSS--YRAH 168 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEE--ECCC
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC------------CeEEEEECCCCcEEEE--EcCc
Confidence 4688899887653322211 111 1112233332226777777754 2478899988763321 1111
Q ss_pred CCCeeEEEEc-cCCeEEEEeccCCC
Q 014650 223 RAGCVGFVAE-ESGEFWVMGGYGDS 246 (421)
Q Consensus 223 r~~~~~~~~~-~~~~iyv~GG~~~~ 246 (421)
.....++.+. ++..+++.|+.++.
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~ 193 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNR 193 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCceEEEEecCCCCCceeeeccccc
Confidence 1112233332 22357777776553
No 112
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.49 E-value=7.5 Score=38.74 Aligned_cols=72 Identities=11% Similarity=0.179 Sum_probs=43.2
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeC-ccCc--eeeccccCC-----C---ccceEEEE--EccCCE-
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNF-LTFS--WERIAPMIS-----P---RGSFACAA--VRSLNQ- 180 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~-~t~~--W~~~~~~~~-----~---r~~~~~~~--~~~~~~- 180 (421)
+.++.++.||+.+.. ...++.+|. .|.+ |+.-..... . ....+.++ .+ ++
T Consensus 57 tP~v~~g~vyv~~~~--------------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~--g~~ 120 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF--------------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD--GKT 120 (599)
T ss_dssp CCEEETTEEEEECST--------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC--SSS
T ss_pred ccEEECCEEEEEeCC--------------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC--Ccc
Confidence 345679999998652 135888888 6654 876443221 1 11123344 45 66
Q ss_pred ---EEEEcCCccccccCCCCCccceEEEEECCCCc--eEE
Q 014650 181 ---IIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVS 215 (421)
Q Consensus 181 ---iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~ 215 (421)
||+.... ..+..+|.++.+ |+.
T Consensus 121 ~~rV~v~t~d-------------g~l~AlDa~TG~~~W~~ 147 (599)
T 1w6s_A 121 PALILKTQLD-------------GNVAALNAETGETVWKV 147 (599)
T ss_dssp CCEEEEECTT-------------SEEEEEETTTCCEEEEE
T ss_pred eeEEEEEcCC-------------CEEEEEECCCCCEEEee
Confidence 8876431 248889998876 875
No 113
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.45 E-value=5.1 Score=34.95 Aligned_cols=97 Identities=13% Similarity=-0.007 Sum_probs=50.0
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccC---CCccc-eEEEEEccCCEEEEEcCCccccccCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMI---SPRGS-FACAAVRSLNQIIVAGGGSRHSLFGA 195 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~---~~r~~-~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (421)
++.||+.... ...+.+||+.......+.... ..... ..+++...++.+||.+...
T Consensus 40 ~g~l~v~~~~--------------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------- 98 (286)
T 1q7f_A 40 QNDIIVADTN--------------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------- 98 (286)
T ss_dssp TCCEEEEEGG--------------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------
T ss_pred CCCEEEEECC--------------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------
Confidence 5678887653 246889998755444433211 11112 3344422228999987421
Q ss_pred CCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEecc
Q 014650 196 AGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 196 ~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
...+.+||.....-..+..... ....++++..++++|+....
T Consensus 99 ----~~~i~~~d~~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~ 140 (286)
T 1q7f_A 99 ----THQIQIYNQYGQFVRKFGATIL--QHPRGVTVDNKGRIIVVECK 140 (286)
T ss_dssp ----GCEEEEECTTSCEEEEECTTTC--SCEEEEEECTTSCEEEEETT
T ss_pred ----CCEEEEECCCCcEEEEecCccC--CCceEEEEeCCCCEEEEECC
Confidence 2347888855443333322111 12234455444789987643
No 114
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.24 E-value=4.7 Score=41.08 Aligned_cols=41 Identities=10% Similarity=0.143 Sum_probs=24.9
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEe
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTV 363 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG 363 (421)
..|+++|+....-+.+...... .....++++.++.||+.-.
T Consensus 562 ~~I~~~d~dG~~~~~~~~~~~~--~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 562 HSISSIDVNGGNRKTILEDEKR--LAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp TEEEEECSSSSCCEEECCCSSS--CSSCCCCEEETTEEEEECS
T ss_pred CeEEEEccCCCceEEEEecCCc--CCCceEeEEECCEEEEEeC
Confidence 5688888865444444322211 1244577778899999873
No 115
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.15 E-value=5.9 Score=34.96 Aligned_cols=112 Identities=8% Similarity=0.017 Sum_probs=56.5
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-C-CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeec-
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-G-PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERI- 160 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~- 160 (421)
..++.||+.++++..+.. +... .....-.+++.. + +.||+.... ..+++||+. .+...+
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~~~-~~~~~~~~i~~~~~~g~l~v~~~~---------------~~l~~~d~~-g~~~~~~ 107 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PEVN-GYGGIPAGCQCDRDANQLFVADMR---------------LGLLVVQTD-GTFEEIA 107 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CEET-TEECCEEEEEECSSSSEEEEEETT---------------TEEEEEETT-SCEEECC
T ss_pred CEEEEEeCCCCcEEEEEe-cccC-CCCCCCceEEEecCCCcEEEEECC---------------CCEEEEeCC-CCEEEEE
Confidence 458899998888876532 1000 000112334433 4 788887642 258999988 766655
Q ss_pred cccCCC---ccceEEEEEccCCEEEEEcCCccc---cccCCCCCccceEEEEECCCCceEE
Q 014650 161 APMISP---RGSFACAAVRSLNQIIVAGGGSRH---SLFGAAGSRISSVERYDVAKNEWVS 215 (421)
Q Consensus 161 ~~~~~~---r~~~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~~~~~~~~yd~~t~~W~~ 215 (421)
...... ..-..++... ++++|+....... ............+++||+. .+...
T Consensus 108 ~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 108 KKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp SBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred eccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 322111 1122333333 2789887653200 0000011123568888887 55544
No 116
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.13 E-value=7.8 Score=36.33 Aligned_cols=114 Identities=11% Similarity=0.011 Sum_probs=60.3
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CC-EEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GP-YIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
.+.++..+.+.....++.+|..+.+...+...+. ...+++.. ++ +|++.+..+ ....++
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~-------~~~~~~~spdg~~la~~~~~~------------g~~~i~ 250 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPR-------HNGAPAFSPDGSKLAFALSKT------------GSLNLY 250 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS-------CEEEEEECTTSSEEEEEECTT------------SSCEEE
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC-------cccCEEEcCCCCEEEEEEecC------------CCceEE
Confidence 3444443333233468899999888776644331 11222222 44 455454421 135799
Q ss_pred EEeCccCceeeccccCCCccceEEEEEccCCE-EEEEcCCccccccCCCCCccceEEEEECCCCceEEC
Q 014650 149 RFNFLTFSWERIAPMISPRGSFACAAVRSLNQ-IIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 149 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
.+|..+.+..++..... ......+..+++ |++.+..+ ....++.+|..++.-..+
T Consensus 251 ~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~----------g~~~i~~~d~~~~~~~~l 306 (415)
T 2hqs_A 251 VMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA----------GRPQVYKVNINGGAPQRI 306 (415)
T ss_dssp EEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT----------SSCEEEEEETTSSCCEEC
T ss_pred EEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC----------CCcEEEEEECCCCCEEEE
Confidence 99999887766654322 222333322254 44443321 134688889988775554
No 117
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.97 E-value=6.3 Score=37.74 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=30.8
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeec--cccCCCccceEEEEEccCCEEEEEcCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERI--APMISPRGSFACAAVRSLNQIIVAGGGS 188 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~~~iyv~GG~~ 188 (421)
++.+|+|.|. ..|+||..+++.... +.++ . --++.... +++|++-|..
T Consensus 158 ~~~~yfFkG~----------------~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~--g~~YfFkG~~ 207 (460)
T 1qhu_A 158 DEGILFFQGN----------------RKWFWDLTTGTKKERSWPAVG--N-CTSALRWL--GRYYCFQGNQ 207 (460)
T ss_dssp SSEEEEEETT----------------EEEEEETTTTEEEEECCTTSC--C-CSEEEEET--TEEEEEETTE
T ss_pred CCeEEEEecc----------------cEEEEecccceeecccCCCCC--c-cchheeeC--CceEEEECCE
Confidence 6789999883 589999887654321 2222 2 23444445 8999998853
No 118
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.94 E-value=6.2 Score=34.77 Aligned_cols=91 Identities=12% Similarity=0.056 Sum_probs=46.0
Q ss_pred CccEEEeCCCCc--EEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eee
Q 014650 84 SSPFLFDAANRA--CRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WER 159 (421)
Q Consensus 84 ~~~~~~d~~~~~--W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~ 159 (421)
..+..+|+.+.+ |+.-..-. ...+...+.-++.|++.+. +.++.||+ +.+ |+-
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~------~~~~~~~~~pdG~ilvs~~----------------~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG------WECNSVAATKAGEILFSYS----------------KGAKMITR-DGRELWNI 71 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT------CCCCEEEECTTSCEEEECB----------------SEEEEECT-TSCEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCcc------CCCcCeEECCCCCEEEeCC----------------CCEEEECC-CCCEEEEE
Confidence 457889987665 54322110 0223333344777887321 35888998 443 654
Q ss_pred ccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 160 IAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 160 ~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
-.+ .....+++..+.+ +++++..... ...+..+|++-+
T Consensus 72 ~~~--~~~~~~~~~~~~d-G~~lv~~~~~-----------~~~v~~vd~~Gk 109 (276)
T 3no2_A 72 AAP--AGCEMQTARILPD-GNALVAWCGH-----------PSTILEVNMKGE 109 (276)
T ss_dssp ECC--TTCEEEEEEECTT-SCEEEEEEST-----------TEEEEEECTTSC
T ss_pred cCC--CCccccccEECCC-CCEEEEecCC-----------CCEEEEEeCCCC
Confidence 331 1112234444443 7776664421 124667777443
No 119
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.92 E-value=7.3 Score=35.58 Aligned_cols=36 Identities=11% Similarity=-0.012 Sum_probs=22.6
Q ss_pred ccCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCC
Q 014650 68 NSQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLP 103 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~ 103 (421)
....+.+++........+++.+|..+.+-..+...+
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~ 79 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR 79 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC
Confidence 344555555444233446889999998888876544
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.89 E-value=3.3 Score=38.81 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=48.8
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
+.|++||..+.+-.++-.+......-.++.+..++..++.|+.+ ..+.+||.++++-...-.....
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D------------g~v~iWd~~~~~~~~~~~~h~~-- 190 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------------AEVQLWDVQQQKRLRNMTSHSA-- 190 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEECCCSS--
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC------------CeEEEEEcCCCcEEEEEeCCCC--
Confidence 46899999888766554443333233444443337777888764 2488899988764332221222
Q ss_pred CeeEEEEccCCeEEEEeccCCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
...++.. + +.+.+.|+.++.
T Consensus 191 ~v~~~s~-~-~~~l~sgs~d~~ 210 (420)
T 4gga_A 191 RVGSLSW-N-SYILSSGSRSGH 210 (420)
T ss_dssp CEEEEEE-E-TTEEEEEETTSE
T ss_pred ceEEEee-C-CCEEEEEeCCCc
Confidence 2233333 3 667777776543
No 121
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.86 E-value=7.5 Score=35.56 Aligned_cols=28 Identities=4% Similarity=0.093 Sum_probs=18.5
Q ss_pred EEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc------eeecccc
Q 014650 122 YIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS------WERIAPM 163 (421)
Q Consensus 122 ~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~------W~~~~~~ 163 (421)
.+++.|+.+ ..+.+||..+.+ +..+...
T Consensus 82 ~~l~s~~~d--------------g~i~iw~~~~~~~~~~~~~~~~~~~ 115 (397)
T 1sq9_A 82 CLVATTSFS--------------GDLLFYRITREDETKKVIFEKLDLL 115 (397)
T ss_dssp EEEEEEETT--------------SCEEEEEEEECTTTCCEEEEEECCS
T ss_pred cEEEEEcCC--------------CCEEEEEccCCcccccccceeeccc
Confidence 677777642 458888887776 6665544
No 122
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.84 E-value=13 Score=40.19 Aligned_cols=124 Identities=6% Similarity=-0.023 Sum_probs=60.7
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
.+..||..+.+-... +... ......+.. ++..++.|+. -..+.+||..+.+-...
T Consensus 638 ~i~vw~~~~~~~~~~--~~~h-----~~~v~~~~~s~~~~~l~s~~~--------------d~~v~vwd~~~~~~~~~-- 694 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLD--IKAH-----EDEVLCCAFSSDDSYIATCSA--------------DKKVKIWDSATGKLVHT-- 694 (1249)
T ss_dssp CEEEEETTTCCEEEE--ECCC-----SSCEEEEEECTTSSEEEEEET--------------TSEEEEEETTTCCEEEE--
T ss_pred eEEEEECCCCCEEEE--eccC-----CCCEEEEEEecCCCEEEEEeC--------------CCeEEEEECCCCceEEE--
Confidence 477889887664322 2211 111222222 5566666663 24689999887654322
Q ss_pred cCCCccceEEEEEcc--CCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEE
Q 014650 163 MISPRGSFACAAVRS--LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~ 240 (421)
+........++.+.. ++.+++.|+.+ ..+.+||..+..-...-. .......++.+..++...+.
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d------------~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSND------------FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETT------------SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCC------------CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEE
Confidence 211222223333321 14456666643 247889988876433211 11112233333333667777
Q ss_pred eccCC
Q 014650 241 GGYGD 245 (421)
Q Consensus 241 GG~~~ 245 (421)
|+.++
T Consensus 761 ~s~dg 765 (1249)
T 3sfz_A 761 CSADG 765 (1249)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 76654
No 123
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.65 E-value=8.9 Score=36.00 Aligned_cols=64 Identities=8% Similarity=0.116 Sum_probs=32.8
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccC-CEEEEEcCCccccccCCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL-NQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~ 198 (421)
++.+++.|+. ...+.+||..++.-..+. .-...-.++.+..+ ..+++.|+.+
T Consensus 220 ~~~~l~~g~~--------------dg~i~~wd~~~~~~~~~~---~h~~~v~~v~~~p~~~~~~~s~s~d---------- 272 (435)
T 4e54_B 220 SSRMVVTGDN--------------VGNVILLNMDGKELWNLR---MHKKKVTHVALNPCCDWFLATASVD---------- 272 (435)
T ss_dssp TTTEEEEECS--------------SSBEEEEESSSCBCCCSB---CCSSCEEEEEECTTCSSEEEEEETT----------
T ss_pred CCCEEEEEeC--------------CCcEeeeccCcceeEEEe---cccceEEeeeecCCCceEEEEecCc----------
Confidence 5667777764 245888887654322221 11112223333211 3466667653
Q ss_pred ccceEEEEECCCCc
Q 014650 199 RISSVERYDVAKNE 212 (421)
Q Consensus 199 ~~~~~~~yd~~t~~ 212 (421)
..+.+||..+.+
T Consensus 273 --~~v~iwd~~~~~ 284 (435)
T 4e54_B 273 --QTVKIWDLRQVR 284 (435)
T ss_dssp --SBCCEEETTTCC
T ss_pred --ceeeEEeccccc
Confidence 236678877654
No 124
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.64 E-value=4.2 Score=37.24 Aligned_cols=87 Identities=13% Similarity=0.081 Sum_probs=36.8
Q ss_pred eEEEEeCccCceeeccccCC-C-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMIS-P-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~-~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 223 (421)
.|.+||..+.+-........ . ...-.++.+..+++.++.|+.+ ..+.+||..+.+-...-... .
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d------------g~v~iwd~~~~~~~~~~~~h--~ 181 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD------------FSVKVWDLSQKAVLKSYNAH--S 181 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT------------SCEEEEETTTTEEEEEECCC--S
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC------------CeEEEEECCCCcEEEEEcCC--C
Confidence 58888887765332222111 1 1112233333226777777754 23788999887643321111 1
Q ss_pred CCeeEEEE-ccCCeEEEEeccCCC
Q 014650 224 AGCVGFVA-EESGEFWVMGGYGDS 246 (421)
Q Consensus 224 ~~~~~~~~-~~~~~iyv~GG~~~~ 246 (421)
....++.+ .+++.+++.+|.++.
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~ 205 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGR 205 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSC
T ss_pred CCEEEEEEccCCCceeeeeccCCc
Confidence 12223333 222356777776543
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=91.61 E-value=7.3 Score=34.94 Aligned_cols=85 Identities=6% Similarity=0.038 Sum_probs=38.5
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-CCCCCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-MDEMPRFRA 224 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~ 224 (421)
.+.+||..+.+......+..-.....++.+..++.+.+.|+.+ ..+.++|..+.+-.. +..-+..
T Consensus 59 ~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D------------~~i~lWd~~~~~~~~~~~~~~~~-- 124 (321)
T 3ow8_A 59 LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD------------AHIRLWDLENGKQIKSIDAGPVD-- 124 (321)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT------------SEEEEEETTTTEEEEEEECCTTC--
T ss_pred CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC------------CcEEEEECCCCCEEEEEeCCCcc--
Confidence 4556665554433222222222222233333225566666654 247888988876432 2111111
Q ss_pred CeeEEEEccCCeEEEEeccCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~ 245 (421)
..++.+..+++..+.|+.++
T Consensus 125 -~~~~~~spdg~~l~~g~~dg 144 (321)
T 3ow8_A 125 -AWTLAFSPDSQYLATGTHVG 144 (321)
T ss_dssp -CCCEEECTTSSEEEEECTTS
T ss_pred -EEEEEECCCCCEEEEEcCCC
Confidence 11223322366777776554
No 126
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.44 E-value=6.5 Score=34.06 Aligned_cols=99 Identities=11% Similarity=-0.027 Sum_probs=52.9
Q ss_pred eEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCC-ccceEEEEEccCCEEEEEcCCccc
Q 014650 114 FTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISP-RGSFACAAVRSLNQIIVAGGGSRH 190 (421)
Q Consensus 114 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~~~~~~~~~~~~~iyv~GG~~~~ 190 (421)
++++.. ++.||+.... ...+++||+.+..-..+.+ .. ..-+++++...++.||+....
T Consensus 39 ~gi~~d~~~~~ly~~d~~--------------~~~I~~~~~~g~~~~~~~~--~~~~~p~~ia~d~~~~~lyv~d~~--- 99 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS--------------EPSIGRASLHGGEPTTIIR--QDLGSPEGIALDHLGRTIFWTDSQ--- 99 (267)
T ss_dssp EEEEEETTTTEEEEEETT--------------TTEEEEEESSSCCCEEEEC--TTCCCEEEEEEETTTTEEEEEETT---
T ss_pred EEEEEecCCCEEEEEECC--------------CCEEEEEecCCCCcEEEEE--CCCCCccEEEEEecCCeEEEEECC---
Confidence 344443 5789987642 3579999987764333221 11 112344443112799998653
Q ss_pred cccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEcc-CCeEEEEec
Q 014650 191 SLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEE-SGEFWVMGG 242 (421)
Q Consensus 191 ~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~~~iyv~GG 242 (421)
...+.++++....-+.+.... .....++++.. ++.||+...
T Consensus 100 ---------~~~I~~~~~~g~~~~~~~~~~--~~~P~~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 100 ---------LDRIEVAKMDGTQRRVLFDTG--LVNPRGIVTDPVRGNLYWTDW 141 (267)
T ss_dssp ---------TTEEEEEETTSCSCEEEECSS--CSSEEEEEEETTTTEEEEEEC
T ss_pred ---------CCEEEEEEcCCCCEEEEEECC--CCCccEEEEeeCCCEEEEEEC
Confidence 245888888754433321111 11223444442 389999864
No 127
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.32 E-value=7.2 Score=34.32 Aligned_cols=77 Identities=13% Similarity=0.049 Sum_probs=39.5
Q ss_pred CeEEEEeCccCc--eeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCCCC
Q 014650 145 DSAFRFNFLTFS--WERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDEMP 220 (421)
Q Consensus 145 ~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~ 220 (421)
..+.++|+.|.+ |+.-.. .....+.+.+..+ +++++.+. ..+..||+ +++ |+.-.+
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~--~~~~~~~~~~~pd-G~ilvs~~--------------~~V~~~d~-~G~~~W~~~~~-- 74 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLE--KGWECNSVAATKA-GEILFSYS--------------KGAKMITR-DGRELWNIAAP-- 74 (276)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTCCCCEEEECTT-SCEEEECB--------------SEEEEECT-TSCEEEEEECC--
T ss_pred CEEEEEECCCCeEEEEeCCC--ccCCCcCeEECCC-CCEEEeCC--------------CCEEEECC-CCCEEEEEcCC--
Confidence 568888887765 664332 1112344444433 88888321 23888998 443 764432
Q ss_pred CCCCCeeEEEEccCCeEEEEec
Q 014650 221 RFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 221 ~~r~~~~~~~~~~~~~iyv~GG 242 (421)
.....+.+....+ +++++...
T Consensus 75 ~~~~~~~~~~~~d-G~~lv~~~ 95 (276)
T 3no2_A 75 AGCEMQTARILPD-GNALVAWC 95 (276)
T ss_dssp TTCEEEEEEECTT-SCEEEEEE
T ss_pred CCccccccEECCC-CCEEEEec
Confidence 1111123333444 66666543
No 128
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.13 E-value=8.3 Score=34.66 Aligned_cols=115 Identities=11% Similarity=0.034 Sum_probs=62.1
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCcc----Ccee
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLT----FSWE 158 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t----~~W~ 158 (421)
.+..+|..+.+...+.+.. ..-++++.. ++.||+.... ...++++|+.+ ..-.
T Consensus 11 ~I~~i~~~~~~~~~~~~~~-------~~p~g~~~d~~~~~ly~~D~~--------------~~~I~~~~~~g~~~~~~~~ 69 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS--------------QRMICSTQLDRAHGVSSYD 69 (316)
T ss_dssp SEEEEETTSCCCEEEECSC-------SSEEEEEEETTTTEEEEEETT--------------TTEEEEEEC--------CE
T ss_pred eEEEEECCCcceEehhcCC-------CceEEEEEEeCCCEEEEEECC--------------CCcEEEEECCCCCCCcccE
Confidence 4778888877665542211 223455544 5789988652 35789999876 2222
Q ss_pred ec-c-ccCCCccceEEEEE--ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEc
Q 014650 159 RI-A-PMISPRGSFACAAV--RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAE 232 (421)
Q Consensus 159 ~~-~-~~~~~r~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~ 232 (421)
.+ + .+..| .++++. + +.||+.-.. ...++++|+....-+.+ ..+..| .++++.
T Consensus 70 ~~~~~~~~~p---~glavd~~~--~~ly~~d~~------------~~~I~~~~~~g~~~~~~~~~~~~~P----~~iavd 128 (316)
T 1ijq_A 70 TVISRDIQAP---DGLAVDWIH--SNIYWTDSV------------LGTVSVADTKGVKRKTLFRENGSKP----RAIVVD 128 (316)
T ss_dssp EEECSSCSCC---CEEEEETTT--TEEEEEETT------------TTEEEEEETTSSSEEEEEECTTCCE----EEEEEE
T ss_pred EEEeCCCCCc---CEEEEeecC--CeEEEEECC------------CCEEEEEeCCCCceEEEEECCCCCc----ceEEeC
Confidence 22 1 12222 344443 4 899998543 23578888876543332 123333 344554
Q ss_pred -cCCeEEEEe
Q 014650 233 -ESGEFWVMG 241 (421)
Q Consensus 233 -~~~~iyv~G 241 (421)
.++.||+..
T Consensus 129 p~~g~ly~~d 138 (316)
T 1ijq_A 129 PVHGFMYWTD 138 (316)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEc
Confidence 238899875
No 129
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=90.81 E-value=9.4 Score=34.74 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=20.9
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEE--ccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVA--EESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~~~iyv~GG~~~~ 246 (421)
.+.+||.++.+-...-.-.. ....++.+ ..++.+++.|+.++.
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHG--ADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp EEEEEETTTCCEEEEEECCS--SCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cEEEEeCCCCeEEEEEcCCC--CCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 47888988876432111111 11112222 212567777776654
No 130
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.69 E-value=11 Score=35.19 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=47.8
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+.+ ..+.+||..+.+- +..+..-...-.++.+..++..++.|+.+
T Consensus 161 ~~~~l~sgs~D--------------~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~~p~~~~l~s~s~D----------- 213 (410)
T 1vyh_C 161 SGKLLASCSAD--------------MTIKLWDFQGFEC--IRTMHGHDHNVSSVSIMPNGDHIVSASRD----------- 213 (410)
T ss_dssp TSSEEEEEETT--------------SCCCEEETTSSCE--EECCCCCSSCEEEEEECSSSSEEEEEETT-----------
T ss_pred CCCEEEEEeCC--------------CeEEEEeCCCCce--eEEEcCCCCCEEEEEEeCCCCEEEEEeCC-----------
Confidence 56677777753 3466778765432 22222212222333332225666777754
Q ss_pred cceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+..-... +........++....++.+++.|+.++.
T Consensus 214 -~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 214 -KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp -SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred -CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 3478889887753321 1111111223333333677777776553
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=90.67 E-value=2 Score=38.61 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=27.5
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
+++|+.++.+ ..+.++|..+++....-+.+........+...+++.+|+.+.
T Consensus 11 ~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 11 HEYMIVTNYP------------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp CEEEEEEETT------------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET
T ss_pred CEEEEEeCCC------------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC
Confidence 6788877642 458899998887543222222001122223333245777764
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.61 E-value=8 Score=34.86 Aligned_cols=53 Identities=9% Similarity=0.068 Sum_probs=27.8
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
..+.+||..+.+-... ++.......++.+..++..++.||.+ ..+.+||..+.
T Consensus 77 g~v~iWd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~d------------~~v~iw~~~~~ 129 (340)
T 1got_B 77 GKLIIWDSYTTNKVHA--IPLRSSWVMTCAYAPSGNYVACGGLD------------NICSIYNLKTR 129 (340)
T ss_dssp TEEEEEETTTCCEEEE--EECSSSCEEEEEECTTSSEEEEEETT------------CEEEEEETTTC
T ss_pred CcEEEEECCCCCcceE--eecCCccEEEEEECCCCCEEEEEeCC------------CeEEEEECccC
Confidence 3578888776553222 22121222233333226677777753 24778887765
No 133
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.59 E-value=7.3 Score=35.49 Aligned_cols=98 Identities=8% Similarity=0.024 Sum_probs=48.2
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccC-CEEEEEcCCccccccCCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL-NQIIVAGGGSRHSLFGAAGS 198 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~ 198 (421)
++..++.|+.+ ..+.+||..+.+-. ..+..-...-.++.+..+ ..+++.|+.+
T Consensus 138 dg~~l~sgs~d--------------~~i~iwd~~~~~~~--~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---------- 191 (344)
T 4gqb_B 138 SGTQAVSGSKD--------------ICIKVWDLAQQVVL--SSYRAHAAQVTCVAASPHKDSVFLSCSED---------- 191 (344)
T ss_dssp TSSEEEEEETT--------------SCEEEEETTTTEEE--EEECCCSSCEEEEEECSSCTTEEEEEETT----------
T ss_pred CCCEEEEEeCC--------------CeEEEEECCCCcEE--EEEcCcCCceEEEEecCCCCCceeeeccc----------
Confidence 56666777642 35888998876532 222211111222222211 3577777754
Q ss_pred ccceEEEEECCCCceEECCCCCCCCCCeeEEEEc-cCCeEEEEeccCC
Q 014650 199 RISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAE-ESGEFWVMGGYGD 245 (421)
Q Consensus 199 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~~iyv~GG~~~ 245 (421)
..+.+||..+.+-...-..........++.+. +++++++.|+.++
T Consensus 192 --~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 192 --NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp --SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred --cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 23788999887643321111111112233332 2266778887655
No 134
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.57 E-value=8.7 Score=33.97 Aligned_cols=85 Identities=11% Similarity=0.060 Sum_probs=41.8
Q ss_pred CeEEEEeCccCceeeccccCCCccc-eEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGS-FACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 223 (421)
..+.+||..+..-.. .+...... .++....+ ++.++.|+.+ ..+.+||..+++-... +....
T Consensus 35 g~v~lWd~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~s~s~d------------~~i~vwd~~~~~~~~~--~~~h~ 97 (304)
T 2ynn_A 35 GRVELWNYETQVEVR--SIQVTETPVRAGKFIAR-KNWIIVGSDD------------FRIRVFNYNTGEKVVD--FEAHP 97 (304)
T ss_dssp SEEEEEETTTTEEEE--EEECCSSCEEEEEEEGG-GTEEEEEETT------------SEEEEEETTTCCEEEE--EECCS
T ss_pred CcEEEEECCCCceeE--EeeccCCcEEEEEEeCC-CCEEEEECCC------------CEEEEEECCCCcEEEE--EeCCC
Confidence 468888887765322 11111111 12222322 6666777753 3478899888753221 11111
Q ss_pred CCeeEEEEccCCeEEEEeccCCC
Q 014650 224 AGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 224 ~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
....++.+..++.+.+.|+.++.
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~ 120 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLT 120 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSC
T ss_pred CcEEEEEEcCCCCEEEEECCCCe
Confidence 12233444333667777776654
No 135
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.57 E-value=5.5 Score=36.44 Aligned_cols=88 Identities=8% Similarity=0.053 Sum_probs=42.6
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+-...-....+...........++.++++|+.+ ..+.+||..+.+-... +.....
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~d~~~~~~~~~--~~~~~~ 187 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------------PKVQLCDLKSGSCSHI--LQGHRQ 187 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS------------SSEEEEESSSSCCCEE--ECCCCS
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC------------CeEEEEeCCCcceeee--ecCCCC
Confidence 46889998887654443333222222222221114466676653 2488889887653211 111111
Q ss_pred CeeEEEEccCCe-EEEEeccCCC
Q 014650 225 GCVGFVAEESGE-FWVMGGYGDS 246 (421)
Q Consensus 225 ~~~~~~~~~~~~-iyv~GG~~~~ 246 (421)
...++.+..++. +++.|+.++.
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSC
T ss_pred cEEEEEECCCCCcEEEEEcCCCc
Confidence 223333332233 6777776553
No 136
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.40 E-value=15 Score=36.49 Aligned_cols=60 Identities=7% Similarity=-0.197 Sum_probs=34.1
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEE-EEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEe
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGF-IVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYI 399 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i 399 (421)
..++.+|..+.+.+.+..- . .....+ ..-++.+++..+.... ...++.+|..+++.+.+
T Consensus 316 ~~l~~~d~~~~~~~~l~~~-~----~~~~~~~s~~~~~~~~~~~~~~~---------------~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 316 AVLGILDPESGELVDAAGP-W----TEWAATLTVSGTRAVGVAASPRT---------------AYEVVELDTVTGRARTI 375 (662)
T ss_dssp CEEEEEETTTTEEEECCSS-C----CEEEEEEEEETTEEEEEEEETTE---------------EEEEEEEETTTCCEEEE
T ss_pred cEEEEEECCCCcEEEecCC-C----CeEEEEEecCCCEEEEEEcCCCC---------------CCEEEEEECCCCceEEe
Confidence 4577778887776665321 1 111223 3345666666543321 14688888888877776
Q ss_pred c
Q 014650 400 F 400 (421)
Q Consensus 400 ~ 400 (421)
.
T Consensus 376 ~ 376 (662)
T 3azo_A 376 G 376 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 137
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.26 E-value=9.2 Score=33.76 Aligned_cols=141 Identities=9% Similarity=0.002 Sum_probs=68.1
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
...+|+... ....++.||+.+++...+. ++. +. .+++.. ++.+|+..+ ..+++
T Consensus 24 ~~~l~~~d~--~~~~i~~~d~~~~~~~~~~-~~~------~~-~~i~~~~dG~l~v~~~----------------~~l~~ 77 (297)
T 3g4e_A 24 SNSLLFVDI--PAKKVCRWDSFTKQVQRVT-MDA------PV-SSVALRQSGGYVATIG----------------TKFCA 77 (297)
T ss_dssp TTEEEEEET--TTTEEEEEETTTCCEEEEE-CSS------CE-EEEEEBTTSSEEEEET----------------TEEEE
T ss_pred CCEEEEEEC--CCCEEEEEECCCCcEEEEe-CCC------ce-EEEEECCCCCEEEEEC----------------CeEEE
Confidence 344555433 2345889999887664432 221 11 233333 566665432 35899
Q ss_pred EeCccCceeeccccCC--CccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC-CCCCCCCCCe
Q 014650 150 FNFLTFSWERIAPMIS--PRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM-DEMPRFRAGC 226 (421)
Q Consensus 150 yd~~t~~W~~~~~~~~--~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~ 226 (421)
||+.+.+++.+..... +........++.++++|+..-..... ..........++++|+.. +...+ ..+..+
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~-~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---- 151 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA-PAVLERHQGALYSLFPDH-HVKKYFDQVDIS---- 151 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB-TTBCCTTCEEEEEECTTS-CEEEEEEEESBE----
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc-cccccCCCcEEEEEECCC-CEEEEeeccccc----
Confidence 9999988877654432 22222333333337887743111000 000012245688888753 33222 111111
Q ss_pred eEEEEc-cCCeEEEEecc
Q 014650 227 VGFVAE-ESGEFWVMGGY 243 (421)
Q Consensus 227 ~~~~~~-~~~~iyv~GG~ 243 (421)
.++++. +++.+|+....
T Consensus 152 ngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEECTTSCEEEEEEGG
T ss_pred cceEEcCCCCEEEEecCC
Confidence 233443 32468887643
No 138
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.19 E-value=11 Score=34.58 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=27.1
Q ss_pred CeEEEEeCccC--ceeeccccCCCccceEEEEEccC-CEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 145 DSAFRFNFLTF--SWERIAPMISPRGSFACAAVRSL-NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 145 ~~v~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
..+.+||..+. ....+..+......-.++.+..+ +.+++.|+.+ ..+.+||..+..
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~ 147 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN------------GEIFIWDMNKCT 147 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS------------SCEEBCBTTTTS
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC------------CeEEEEECCCCc
Confidence 35788887761 12222222211112222233221 5566777753 237778887764
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.12 E-value=15 Score=35.95 Aligned_cols=86 Identities=13% Similarity=0.174 Sum_probs=43.6
Q ss_pred CCeEEEEeCccCceeeccccCCCccceEEEEEccCCE-EEEEcCCccccccCCCCCccceEEEEECCCCceEE---CCCC
Q 014650 144 SDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQ-IIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS---MDEM 219 (421)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~---~~~~ 219 (421)
...++.+|..+.+-..+..++..+.-+.++.--+ ++ +|+.+.. .+.+.++|.++++-.. +...
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spd-g~~l~va~~~------------~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSS-HRYFMTAANN------------SNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTT-SCEEEEEEGG------------GTEEEEEETTTTEEEEEEECSSS
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCC-CCEEEEEecC------------CCeEEEEECCCCeEEEeeccCCC
Confidence 3578999987754322222333333333333322 44 5555432 3458889999987543 2334
Q ss_pred CCCCCCeeEEEEccCCeEEEEecc
Q 014650 220 PRFRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 220 ~~~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
|.+... ..+..-+.+.+|+.+..
T Consensus 368 ph~g~g-~~~~~p~~g~~~~s~~~ 390 (543)
T 1nir_A 368 PHPGRG-ANFVHPKYGPVWSTSHL 390 (543)
T ss_dssp BCCTTC-EEEEETTTEEEEEEEBS
T ss_pred CCCCCC-cccCCCCCccEEEeccC
Confidence 444322 22222222678887653
No 140
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.04 E-value=6.7 Score=35.09 Aligned_cols=55 Identities=5% Similarity=0.170 Sum_probs=30.4
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccC---CEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSL---NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
..+.+||..+.+........... ...++.+..+ +.+++.|+.+ ..+.+||..+..
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~ 101 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAK-PIKCGTFGATSLQQRYLATGDFG------------GNLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESS-CEEEEECTTCCTTTCCEEEEETT------------SCEEEECTTSCS
T ss_pred cEEEEEeCCCCcccceeeecccC-cEEEEEEcCCCCCCceEEEecCC------------CeEEEEeCCCCC
Confidence 46889998887765443322211 2233333321 2666666653 237788887764
No 141
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.02 E-value=10 Score=33.93 Aligned_cols=85 Identities=9% Similarity=0.046 Sum_probs=41.6
Q ss_pred CeEEEEeCccCceee-ccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCC
Q 014650 145 DSAFRFNFLTFSWER-IAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFR 223 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 223 (421)
..+.+||..+.+-.. +..-+.. ..+++ +..+++.++.|+.+ ..+.+||..+.+-... +....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~--~~~~~-~spdg~~l~~g~~d------------g~v~i~~~~~~~~~~~--~~~~~ 164 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVD--AWTLA-FSPDSQYLATGTHV------------GKVNIFGVESGKKEYS--LDTRG 164 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTC--CCCEE-ECTTSSEEEEECTT------------SEEEEEETTTCSEEEE--EECSS
T ss_pred CcEEEEECCCCCEEEEEeCCCcc--EEEEE-ECCCCCEEEEEcCC------------CcEEEEEcCCCceeEE--ecCCC
Confidence 468888987765322 1111111 11222 22226777777753 2477888877653221 11111
Q ss_pred CCeeEEEEccCCeEEEEeccCCC
Q 014650 224 AGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 224 ~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
....++.+..++++.+.|+.++.
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg~ 187 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDGI 187 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSC
T ss_pred ceEEEEEECCCCCEEEEEcCCCe
Confidence 11233344333677777776553
No 142
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.01 E-value=9.8 Score=41.25 Aligned_cols=125 Identities=10% Similarity=-0.060 Sum_probs=60.9
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccC
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMI 164 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 164 (421)
.+..||..+++...+..... .-.+++...+..++.|+. -..+.+||..+.+-...-...
T Consensus 1026 ~i~vwd~~~~~~~~~~~~~~-------~v~~~~~~~~~~l~~~~~--------------dg~v~vwd~~~~~~~~~~~~~ 1084 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVFLQAHQE-------TVKDFRLLQDSRLLSWSF--------------DGTVKVWNVITGRIERDFTCH 1084 (1249)
T ss_dssp BEEEEETTTTEEECCBCCSS-------CEEEEEECSSSEEEEEES--------------SSEEEEEETTTTCCCEEEECC
T ss_pred EEEEEECCCCceEEEecCCC-------cEEEEEEcCCCcEEEEEC--------------CCcEEEEECCCCceeEEEccc
Confidence 47788888877664432221 122233333334455553 246888998776533211111
Q ss_pred CCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccC
Q 014650 165 SPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYG 244 (421)
Q Consensus 165 ~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~ 244 (421)
.... .+++... ++..++.|+.+ ..+.+||..+.+- +..+........++.+..++++.+.|+.+
T Consensus 1085 ~~~v-~~~~~s~-d~~~l~s~s~d------------~~v~iwd~~~~~~--~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1085 QGTV-LSCAISS-DATKFSSTSAD------------KTAKIWSFDLLSP--LHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp SSCC-CCEEECS-SSSSCEEECCS------------SCCCEECSSSSSC--SBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCcE-EEEEECC-CCCEEEEEcCC------------CcEEEEECCCcce--eeeeccCCCcEEEEEECCCCCEEEEEeCC
Confidence 1111 1122222 26667777754 2366788776542 22222222222344443337788888766
Q ss_pred CC
Q 014650 245 DS 246 (421)
Q Consensus 245 ~~ 246 (421)
+.
T Consensus 1149 g~ 1150 (1249)
T 3sfz_A 1149 GE 1150 (1249)
T ss_dssp SC
T ss_pred CE
Confidence 54
No 143
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.01 E-value=12 Score=34.78 Aligned_cols=96 Identities=9% Similarity=0.108 Sum_probs=48.7
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+.+ ..+.+||..+.+-... +......-.++.+..++.+++.|+.++
T Consensus 119 ~~~~l~s~s~D--------------g~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~---------- 172 (410)
T 1vyh_C 119 VFSVMVSASED--------------ATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADM---------- 172 (410)
T ss_dssp SSSEEEEEESS--------------SCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTS----------
T ss_pred CCCEEEEEeCC--------------CeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCC----------
Confidence 45677777642 3588899887654322 111111122233322267777777642
Q ss_pred cceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.+.+||..+.+-.. .+........++.+..++...+.|+.++
T Consensus 173 --~i~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D~ 214 (410)
T 1vyh_C 173 --TIKLWDFQGFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRDK 214 (410)
T ss_dssp --CCCEEETTSSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred --eEEEEeCCCCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 36678877654322 2221122233444433366777777654
No 144
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=89.88 E-value=12 Score=34.49 Aligned_cols=97 Identities=7% Similarity=0.022 Sum_probs=48.6
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+. ...+.+||..+.+-... +......-.++.+..++.+++.|+.+
T Consensus 108 ~~~~l~~~~~--------------dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~d----------- 160 (420)
T 3vl1_A 108 QMRRFILGTT--------------EGDIKVLDSNFNLQREI--DQAHVSEITKLKFFPSGEALISSSQD----------- 160 (420)
T ss_dssp SSCEEEEEET--------------TSCEEEECTTSCEEEEE--TTSSSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCEEEEEEC--------------CCCEEEEeCCCcceeee--cccccCccEEEEECCCCCEEEEEeCC-----------
Confidence 5667777764 24588899876654332 11111222333332226666677653
Q ss_pred cceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+.+-.. .+........++.+..++...+.|+.++.
T Consensus 161 -~~i~iwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 161 -MQLKIWSVKDGSNPR--TLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp -SEEEEEETTTCCCCE--EEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred -CeEEEEeCCCCcCce--EEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 248889988764211 11111112233333323666667776553
No 145
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=89.74 E-value=0.13 Score=51.32 Aligned_cols=35 Identities=17% Similarity=0.427 Sum_probs=32.0
Q ss_pred CCCChHHHHHHHhcCC-CcchhHHHHhhhHhHHhhh
Q 014650 21 IPGLPNDVASLILAFV-PYSHQSRLKQTCRSWFLFF 55 (421)
Q Consensus 21 ~~~Lp~dl~~~~l~~l-p~~~~~~~~~v~k~W~~l~ 55 (421)
...||+|++.+||+++ +..+..++..|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 3579999999999999 8999999999999999873
No 146
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=89.71 E-value=9.9 Score=33.30 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=43.1
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..+..+|..+++....-.+... ...-.+++.. ++..++.|+.+ ..+.+||..+.+-...-
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~~~~~~l~sgs~D--------------g~v~iw~~~~~~~~~~~- 105 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQP----GEYISSVAWIKEGNYLAVGTSS--------------AEVQLWDVQQQKRLRNM- 105 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCST----TCCEEEEEECTTSSEEEEEETT--------------SEEEEEETTTTEEEEEE-
T ss_pred CEEEEEECCCCCEEEEEEecCC----CCeEEEEEECCCCCEEEEEECC--------------CcEEEeecCCceeEEEe-
Confidence 3588999998887654333321 0111222222 56677777742 46888998887643222
Q ss_pred cCCCccceEEEEEccCCEEEEEcCC
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGG 187 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~ 187 (421)
........+.... +.+.+.|+.
T Consensus 106 -~~h~~~~~~~~~~--~~~l~s~~~ 127 (318)
T 4ggc_A 106 -TSHSARVGSLSWN--SYILSSGSR 127 (318)
T ss_dssp -ECCSSCEEEEEEE--TTEEEEEET
T ss_pred -cCccceEEEeecC--CCEEEEEec
Confidence 1112222333444 566666664
No 147
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=89.67 E-value=11 Score=33.65 Aligned_cols=119 Identities=6% Similarity=-0.075 Sum_probs=63.4
Q ss_pred eEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEe
Q 014650 73 LLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFN 151 (421)
Q Consensus 73 ~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd 151 (421)
.+++.+.. ...++.||+.+++...+...+. ..-.+++.. ++.+|+....... ....+++||
T Consensus 57 ~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~------~~~~~i~~~~dg~l~v~~~~~~~----------~~~~i~~~d 118 (333)
T 2dg1_A 57 QLFLLDVF--EGNIFKINPETKEIKRPFVSHK------ANPAAIKIHKDGRLFVCYLGDFK----------STGGIFAAT 118 (333)
T ss_dssp CEEEEETT--TCEEEEECTTTCCEEEEEECSS------SSEEEEEECTTSCEEEEECTTSS----------SCCEEEEEC
T ss_pred CEEEEECC--CCEEEEEeCCCCcEEEEeeCCC------CCcceEEECCCCcEEEEeCCCCC----------CCceEEEEe
Confidence 35554432 2358899999888776532111 122334433 6778877542110 124799999
Q ss_pred CccCceeec-cccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC
Q 014650 152 FLTFSWERI-APMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 152 ~~t~~W~~~-~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
+.+.+.+.+ ....... ......+..++++|+...... .......++++|+.+.+...+
T Consensus 119 ~~~~~~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~------~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAY-CIDDMVFDSKGGFYFTDFRGY------STNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp TTSCSCEEEECSSSSCC-CEEEEEECTTSCEEEEECCCB------TTBCCEEEEEECTTSCCEEEE
T ss_pred CCCCEEEEEEccCccCC-cccceEECCCCCEEEEecccc------ccCCCceEEEEeCCCCEEEEe
Confidence 988776533 2221122 222233332378888654210 112245688899887766544
No 148
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=89.66 E-value=11 Score=33.81 Aligned_cols=86 Identities=10% Similarity=0.022 Sum_probs=45.3
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC--ceEECCCC---
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN--EWVSMDEM--- 219 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~--~W~~~~~~--- 219 (421)
..+.++|+.+.+....... .........+++.+++|||....+ ..+.+||+... .-..+...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~-~~~~~p~gia~d~~g~l~v~d~~~------------~~v~~~~~~g~~~~~~~~~~~~~~ 135 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK-NLFYLPHGLSIDTDGNYWVTDVAL------------HQVFKLDPHSKEGPLLILGRSMQP 135 (329)
T ss_dssp CCEEEECTTTCCEEEEECT-TTCSSEEEEEECTTSCEEEEETTT------------TEEEEECTTCSSCCSEEESBTTBC
T ss_pred CcEEEEECCCCeEEeccCC-CccCCceEEEECCCCCEEEEECCC------------CEEEEEeCCCCeEEEEEecccCCC
Confidence 4699999987765432211 111122233333237899886642 35888998765 22222211
Q ss_pred ---CCCCCCeeEEEEcc-CCeEEEEecc
Q 014650 220 ---PRFRAGCVGFVAEE-SGEFWVMGGY 243 (421)
Q Consensus 220 ---~~~r~~~~~~~~~~-~~~iyv~GG~ 243 (421)
........++++.. ++.||+..++
T Consensus 136 g~~~~~~~~P~~ia~~~~~g~lyv~d~~ 163 (329)
T 3fvz_A 136 GSDQNHFCQPTDVAVEPSTGAVFVSDGY 163 (329)
T ss_dssp CCSTTCCSSEEEEEECTTTCCEEEEECS
T ss_pred CCCccccCCCcEEEEeCCCCeEEEEeCC
Confidence 11111234556653 4899999863
No 149
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.66 E-value=10 Score=33.36 Aligned_cols=100 Identities=9% Similarity=0.040 Sum_probs=49.8
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEcc--CCEEEEEcCCccccccCCCC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRS--LNQIIVAGGGSRHSLFGAAG 197 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 197 (421)
++..++.|+.+ ..+.+||..+.+.+.+..+..-...-..+.+.. ++.+++.|+.+
T Consensus 20 ~g~~las~s~D--------------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D--------- 76 (297)
T 2pm7_B 20 YGKRMATCSSD--------------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD--------- 76 (297)
T ss_dssp TSSEEEEEETT--------------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---------
T ss_pred CCCEEEEEeCC--------------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC---------
Confidence 56677777742 357888876654433333322111122223210 15666777754
Q ss_pred CccceEEEEECCCCceEECCCCCCCCCCeeEEEEccC--CeEEEEeccCC
Q 014650 198 SRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEES--GEFWVMGGYGD 245 (421)
Q Consensus 198 ~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~ 245 (421)
..+.++|..++.|..+..+........++.+..+ +.+.+.|+.++
T Consensus 77 ---~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 77 ---GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp ---TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ---CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 2478899988877554322211112223333211 45666666554
No 150
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.59 E-value=11 Score=33.69 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=40.5
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+-.. .+........++.+..++..++.|+.+ ..+.+||..+.+-...-....
T Consensus 54 g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~--- 116 (369)
T 3zwl_B 54 SSASVWYSLNGERLG--TLDGHTGTIWSIDVDCFTKYCVTGSAD------------YSIKLWDVSNGQCVATWKSPV--- 116 (369)
T ss_dssp SCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETT------------TEEEEEETTTCCEEEEEECSS---
T ss_pred CEEEEEeCCCchhhh--hhhhcCCcEEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCcEEEEeecCC---
Confidence 358888877655322 222222222333332225666666653 248889988876443222111
Q ss_pred CeeEEEEccCCeEEEEeccC
Q 014650 225 GCVGFVAEESGEFWVMGGYG 244 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~ 244 (421)
...++.+..+++.++.++.+
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp CEEEEEECTTSSEEEEEECC
T ss_pred CeEEEEEccCCCEEEEecCC
Confidence 12233333335666655543
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.56 E-value=11 Score=33.40 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=52.9
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-C-CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-G-PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA 161 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 161 (421)
..+..+|+.+.+-...-.++.. .. ....++.. + +.+|+.+.. ...+++||+.+.+-...-
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~---~~-~~~~~~~s~dg~~l~v~~~~--------------~~~v~~~d~~~~~~~~~~ 72 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADA---GP-TPMVPMVAPGGRIAYATVNK--------------SESLVKIDLVTGETLGRI 72 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC---TT-CCCCEEECTTSSEEEEEETT--------------TTEEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCC---CC-CccceEEcCCCCEEEEEeCC--------------CCeEEEEECCCCCeEeeE
Confidence 4588899988765443223320 00 01223322 3 478877652 356999999887644321
Q ss_pred ccCCC----ccceEEEEEccCCEEEEEcCCccccccCCCCC--ccceEEEEECCCCceE
Q 014650 162 PMISP----RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGS--RISSVERYDVAKNEWV 214 (421)
Q Consensus 162 ~~~~~----r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~--~~~~~~~yd~~t~~W~ 214 (421)
..+.+ ..-+.++...+...+|+.....+. ..... ....+.+||..+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~---~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 73 DLSTPEERVKSLFGAALSPDGKTLAIYESPVRL---ELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp ECCBTTEEEECTTCEEECTTSSEEEEEEEEEEE---CSSCEEECCCEEEEEETTTTEEE
T ss_pred EcCCcccccccccceEECCCCCEEEEEeccccc---ccccccccCceEEEEECCCCcEE
Confidence 22110 011223332221467777421100 00000 1357889999887654
No 152
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.55 E-value=12 Score=34.23 Aligned_cols=55 Identities=9% Similarity=-0.018 Sum_probs=29.2
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCC----CCCeeEEEEccCC-eEEEEeccCC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRF----RAGCVGFVAEESG-EFWVMGGYGD 245 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----r~~~~~~~~~~~~-~iyv~GG~~~ 245 (421)
+.+++.|+.+ ..+.+||..+.+-...-..+.. .....++.+..++ .+++.|+.++
T Consensus 178 ~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 178 AHVFASAGSS------------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp TTEEEEESSS------------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred CcEEEEEcCC------------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 4677777754 2488899988765432222211 1223334443323 5777776554
No 153
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.48 E-value=9.5 Score=32.75 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=36.1
Q ss_pred CCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCC-CceEECCCC
Q 014650 144 SDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAK-NEWVSMDEM 219 (421)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t-~~W~~~~~~ 219 (421)
...+++||..+.+...+...... ...+.+..+++.+++++. ..+.++|..+ .+...+...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~---v~~~~~spdg~~l~~~~~-------------~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPEL---FEAPNWSPDGKYLLLNSE-------------GLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSC---CEEEEECTTSSEEEEEET-------------TEEEEEESSSCCSCEECCCT
T ss_pred ceeEEEEeCCCCceeeeccCCcc---eEeeEECCCCCEEEEEcC-------------CeEEEEeCCCCCCceEeccc
Confidence 45799999998887665443221 122233222565555441 2588999998 877666543
No 154
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.31 E-value=12 Score=33.55 Aligned_cols=98 Identities=10% Similarity=0.116 Sum_probs=51.2
Q ss_pred CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEcc-CCEEEEEcCCccccccCCCCCc
Q 014650 121 PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRS-LNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 121 ~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
+.+++.|+. -..+.+||..+.+-.. .+......-.++.+.. ++.+++.|+.+
T Consensus 85 ~~~l~~~~~--------------dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~d----------- 137 (366)
T 3k26_A 85 HPLLAVAGS--------------RGIIRIINPITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKD----------- 137 (366)
T ss_dssp CEEEEEEET--------------TCEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETT-----------
T ss_pred CCEEEEecC--------------CCEEEEEEchhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCC-----------
Confidence 467777774 2468899987754322 1221112222333321 26777777754
Q ss_pred cceEEEEECCCCceEEC-CCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 200 ISSVERYDVAKNEWVSM-DEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
..+.+||..+.+-... ..+........++.+..++...+.|+.++.
T Consensus 138 -g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 138 -HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp -SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred -CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCC
Confidence 2488899988764332 222222222334444333666777776553
No 155
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.27 E-value=11 Score=33.14 Aligned_cols=84 Identities=15% Similarity=0.150 Sum_probs=46.7
Q ss_pred CeEEEEeCccCceeecccc--CCCccceEEEEEccC-CEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC-CCCC
Q 014650 145 DSAFRFNFLTFSWERIAPM--ISPRGSFACAAVRSL-NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM-DEMP 220 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~--~~~r~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~ 220 (421)
..+++||+.+.+++.+... ...........+..+ +++|+.... ..+.+||++ ++...+ ....
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------------~~l~~~d~~-g~~~~~~~~~~ 111 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------------LGLLVVQTD-GTFEEIAKKDS 111 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------------TEEEEEETT-SCEEECCSBCT
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------------CCEEEEeCC-CCEEEEEeccC
Confidence 4699999988888765420 001112223334433 678887642 148889998 777665 3321
Q ss_pred C--CCCCeeEEEEccCCeEEEEec
Q 014650 221 R--FRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 221 ~--~r~~~~~~~~~~~~~iyv~GG 242 (421)
. +......+++..++.+|+...
T Consensus 112 ~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 112 EGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp TSCBCBCCCEEEECTTSCEEEEEC
T ss_pred CCccccCCcCEEECCCCCEEEEec
Confidence 1 111223455544478988764
No 156
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.22 E-value=13 Score=33.88 Aligned_cols=66 Identities=6% Similarity=-0.114 Sum_probs=35.8
Q ss_pred CCeEEEEeCccCceeeccccCCCccceEEEEE-ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 144 SDSAFRFNFLTFSWERIAPMISPRGSFACAAV-RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
...++++|..+.+.+.+..... ...+....- +. ++|+++.. . ........++.+|..+..++.+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg-~~l~~~~~-~------~~~~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTA-WLGHPIYRPFDD-STVGFCHE-G------PHDLVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEE-EEEEEEEC-S------CSSSCSCCCEEEETTSCCCEESSC
T ss_pred cceEEEEECCCCcEEeeccCCc-ccccceECCCCC-CEEEEEec-C------CCCCCCceEEEEECCCCceeEeec
Confidence 3478999998887766653221 111111121 20 34555532 1 011223568899998888777655
No 157
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=89.12 E-value=20 Score=36.07 Aligned_cols=72 Identities=11% Similarity=0.086 Sum_probs=44.3
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeeccccCCC--------ccceEEEEEccCCEEEEE
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIAPMISP--------RGSFACAAVRSLNQIIVA 184 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~~~iyv~ 184 (421)
+.++.++.||+.... ..++.+|..|.+ |+.-...+.. ....+.++.+ ++||+.
T Consensus 61 ~P~v~~g~vyv~~~~---------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~ 123 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW---------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG--DKVYVG 123 (668)
T ss_dssp CCEEETTEEEEEEGG---------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB--TEEEEE
T ss_pred CCEEECCEEEEECCC---------------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC--CEEEEE
Confidence 345679999988653 357788876654 7754332211 0122345566 888876
Q ss_pred cCCccccccCCCCCccceEEEEECCCCc--eEEC
Q 014650 185 GGGSRHSLFGAAGSRISSVERYDVAKNE--WVSM 216 (421)
Q Consensus 185 GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~ 216 (421)
... ..+..+|.++.+ |+.-
T Consensus 124 ~~d-------------g~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 124 TLD-------------GRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp CTT-------------SEEEEEETTTCCEEEEEE
T ss_pred cCC-------------CEEEEEECCCCCEeeeec
Confidence 431 248899999876 8764
No 158
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.01 E-value=13 Score=33.53 Aligned_cols=43 Identities=9% Similarity=0.234 Sum_probs=23.2
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.+||..+.+-... +........++.+..++.+++.|+.++.
T Consensus 165 ~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~~ 207 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 478899888764322 1111112233444333678888876654
No 159
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.85 E-value=12 Score=33.30 Aligned_cols=148 Identities=7% Similarity=-0.073 Sum_probs=71.2
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCC---C----------CCCcceEEEEe--CCEEEEEcccccCCCCC
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPS---T----------YSLCNFTSISL--GPYIYLLGGSHFDARSF 136 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~---~----------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 136 (421)
.++|+... ...++.||+.+.++..+........ + ....-++++.. ++.|||....
T Consensus 31 ~~l~v~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------- 100 (322)
T 2fp8_A 31 KGFYTSVQ---DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------- 100 (322)
T ss_dssp SSEEEECT---TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------
T ss_pred CEEEEEcC---CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------
Confidence 44555322 2458889998877665421110000 0 00112455555 5789987431
Q ss_pred CCCCCCCCCeEEEEeCccCceeeccccCCC-c-cceEEEEEcc-CCEEEEEcCCccccccCC------CCCccceEEEEE
Q 014650 137 PLDRPLPSDSAFRFNFLTFSWERIAPMISP-R-GSFACAAVRS-LNQIIVAGGGSRHSLFGA------AGSRISSVERYD 207 (421)
Q Consensus 137 ~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r-~~~~~~~~~~-~~~iyv~GG~~~~~~~~~------~~~~~~~~~~yd 207 (421)
..+.+||+.+.+.+.+...... . ......+++. ++.||+........ ... .......+.+||
T Consensus 101 --------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~-~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 101 --------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYD-DRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp --------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCC-TTCHHHHHHHTCCCEEEEEEE
T ss_pred --------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccc-ccccceehcccCCCceEEEEe
Confidence 2478899887665555332111 1 1122233332 38899875321000 000 001235689999
Q ss_pred CCCCceEECC-CCCCCCCCeeEEEEccCC-eEEEEec
Q 014650 208 VAKNEWVSMD-EMPRFRAGCVGFVAEESG-EFWVMGG 242 (421)
Q Consensus 208 ~~t~~W~~~~-~~~~~r~~~~~~~~~~~~-~iyv~GG 242 (421)
+.+.+.+.+. .+..| .++++..++ .||+.-.
T Consensus 172 ~~~~~~~~~~~~~~~p----~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 172 PSTKETTLLLKELHVP----GGAEVSADSSFVLVAEF 204 (322)
T ss_dssp TTTTEEEEEEEEESCC----CEEEECTTSSEEEEEEG
T ss_pred CCCCEEEEeccCCccC----cceEECCCCCEEEEEeC
Confidence 9887765432 11222 234444323 5888743
No 160
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=88.81 E-value=14 Score=33.94 Aligned_cols=94 Identities=6% Similarity=-0.023 Sum_probs=46.7
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
.+..||..+.+-...-.-.. ..-.+++.. ++.+++.|+. -..+.+||..+.+-. ..+
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~s~s~--------------d~~i~iwd~~~~~~~--~~~ 177 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHV------SEITKLKFFPSGEALISSSQ--------------DMQLKIWSVKDGSNP--RTL 177 (420)
T ss_dssp CEEEECTTSCEEEEETTSSS------SCEEEEEECTTSSEEEEEET--------------TSEEEEEETTTCCCC--EEE
T ss_pred CEEEEeCCCcceeeeccccc------CccEEEEECCCCCEEEEEeC--------------CCeEEEEeCCCCcCc--eEE
Confidence 47788887766544311110 111222222 4556666664 246889998765421 112
Q ss_pred CCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 164 ISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 164 ~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
........++.+..++..++.|+.+ ..+.+||..+.+
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d------------~~v~iwd~~~~~ 214 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLD------------GTIRLWECGTGT 214 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETT------------SCEEEEETTTTE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCC------------CcEEEeECCCCc
Confidence 1111122222332225666666653 237788888765
No 161
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.76 E-value=19 Score=35.42 Aligned_cols=106 Identities=12% Similarity=0.092 Sum_probs=57.0
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
.+.+|+.... .+.+..+|+.+.+-... ++.. ..-|.++.. +.++|+.+. ...+.
T Consensus 166 ~~~~~V~~~~--~~~V~viD~~t~~v~~~--i~~g-----~~p~~v~~SpDGr~lyv~~~---------------dg~V~ 221 (567)
T 1qks_A 166 ENLFSVTLRD--AGQIALIDGSTYEIKTV--LDTG-----YAVHISRLSASGRYLFVIGR---------------DGKVN 221 (567)
T ss_dssp GGEEEEEETT--TTEEEEEETTTCCEEEE--EECS-----SCEEEEEECTTSCEEEEEET---------------TSEEE
T ss_pred CceEEEEeCC--CCeEEEEECCCCeEEEE--EeCC-----CCccceEECCCCCEEEEEcC---------------CCeEE
Confidence 4556665542 35688999998765432 2221 222344433 567887642 24699
Q ss_pred EEeCccCceeeccccCCCccceEEEEEc----cCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 149 RFNFLTFSWERIAPMISPRGSFACAAVR----SLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 149 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~----~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
+||+.+.+-+.+..++.+..-..+++-. +...+||.... .+.+.++|..+.+
T Consensus 222 viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~------------~~~v~ViD~~t~~ 277 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW------------PPQYVIMDGETLE 277 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE------------TTEEEEEETTTCC
T ss_pred EEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEcc------------CCeEEEEECCCCc
Confidence 9998633334444444443223333330 21467766442 3457788877755
No 162
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=88.42 E-value=14 Score=33.52 Aligned_cols=137 Identities=8% Similarity=-0.033 Sum_probs=67.5
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcc-eEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCN-FTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
.+++..+.+ ..+..||..+.+....-..... ... .+++.. ++.+++.|+. -..+.
T Consensus 87 ~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~--------------d~~i~ 144 (383)
T 3ei3_B 87 TTVAVGSKG---GDIILWDYDVQNKTSFIQGMGP-----GDAITGMKFNQFNTNQLFVSSI--------------RGATT 144 (383)
T ss_dssp TEEEEEEBT---SCEEEEETTSTTCEEEECCCST-----TCBEEEEEEETTEEEEEEEEET--------------TTEEE
T ss_pred CEEEEEcCC---CeEEEEeCCCcccceeeecCCc-----CCceeEEEeCCCCCCEEEEEeC--------------CCEEE
Confidence 445444433 3478899887776554332111 112 223333 3356666653 24688
Q ss_pred EEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeE
Q 014650 149 RFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVG 228 (421)
Q Consensus 149 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 228 (421)
+||..++....+...........++.+..++..++.|+.+ ..+.+||.....-..+.. ......+
T Consensus 145 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~---h~~~v~~ 209 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST------------GRLLLLGLDGHEIFKEKL---HKAKVTH 209 (383)
T ss_dssp EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT------------SEEEEEETTSCEEEEEEC---SSSCEEE
T ss_pred EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC------------CCEEEEECCCCEEEEecc---CCCcEEE
Confidence 8998876665554332211222233332226666777653 357888885443333221 1112233
Q ss_pred EEEccCCe-EEEEeccCC
Q 014650 229 FVAEESGE-FWVMGGYGD 245 (421)
Q Consensus 229 ~~~~~~~~-iyv~GG~~~ 245 (421)
+.+..++. +++.|+.++
T Consensus 210 ~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp EEECSSCTTEEEEEETTS
T ss_pred EEECCCCCCEEEEEeCCC
Confidence 33433244 666666554
No 163
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.27 E-value=23 Score=35.56 Aligned_cols=18 Identities=22% Similarity=0.267 Sum_probs=13.5
Q ss_pred cceEEEEECCCCceEECC
Q 014650 200 ISSVERYDVAKNEWVSMD 217 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~ 217 (421)
...+.++|..+++-..+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp EEEEEEEETTTTEEEECC
T ss_pred eeEEEEEECCCCceEeec
Confidence 456889999988766554
No 164
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.13 E-value=26 Score=36.12 Aligned_cols=42 Identities=10% Similarity=0.162 Sum_probs=26.0
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEee
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVL 364 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~ 364 (421)
..|+++|+....=+.+..-... ....+++++.+++||+.--.
T Consensus 580 ~~I~~~d~dG~~~~~v~~~~~~--l~~P~glav~~~~lYwtD~~ 621 (791)
T 3m0c_C 580 HSISSIDVNGGNRKTILEDEKR--LAHPFSLAVFEDKVFWTDII 621 (791)
T ss_dssp TEEEEEETTSCSCEEEEECTTT--TSSEEEEEEETTEEEEEETT
T ss_pred CcEEEEecCCCceEEEecCCCc--cCCCCEEEEeCCEEEEEECC
Confidence 5688888766544444321111 12456888889999998743
No 165
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.11 E-value=9.7 Score=38.92 Aligned_cols=85 Identities=11% Similarity=0.032 Sum_probs=41.8
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.+||..+.+.... +........++.+..++..+++|+.+ ..+.+||..+++....-... ..
T Consensus 35 g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d------------g~i~vw~~~~~~~~~~~~~~--~~ 98 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRS--IQVTETPVRAGKFIARKNWIIVGSDD------------FRIRVFNYNTGEKVVDFEAH--PD 98 (814)
T ss_dssp SEEEEEETTTTEEEEE--EECCSSCEEEEEEEGGGTEEEEEETT------------SEEEEEETTTCCEEEEEECC--SS
T ss_pred CEEEEEECCCCceEEE--EecCCCcEEEEEEeCCCCEEEEEeCC------------CeEEEEECCCCcEEEEEecC--CC
Confidence 4688899877654322 11111112222222226666777643 35888999887754321111 11
Q ss_pred CeeEEEEccCCeEEEEeccCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~ 245 (421)
...++.+..++...+.|+.++
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg 119 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDL 119 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEcCCC
Confidence 223334433355666666544
No 166
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.04 E-value=15 Score=32.23 Aligned_cols=31 Identities=6% Similarity=0.199 Sum_probs=21.2
Q ss_pred CCeEEEEEeecCCCccccccccccccceeeEEEEEeCCc-ceeeEecccC
Q 014650 355 DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRK-KTWRYIFTKP 403 (421)
Q Consensus 355 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~i~~~p 403 (421)
++++++.||.++ .|.+||.++ +.|..+..+.
T Consensus 317 ~~~~l~s~~~dg------------------~v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 317 TGTILSSAGDDG------------------KVRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp SSCCEEEEETTS------------------CEEEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEecCCC------------------cEEEEecCcCcchhheeehc
Confidence 567777777663 477888765 4787776554
No 167
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.78 E-value=18 Score=32.95 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=25.6
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
+.++++|+.+ ..+.+||.....-..+.. ......++.+..++..++.++.++
T Consensus 120 ~~~l~~~~~d------------g~i~i~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 120 GNSIVTGVEN------------GELRLWNKTGALLNVLNF---HRAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp SSEEEEEETT------------SCEEEEETTSCEEEEECC---CCSCEEEEEECTTSSEEEEEETTC
T ss_pred CCEEEEEeCC------------CeEEEEeCCCCeeeeccC---CCccEEEEEECCCCCEEEEEecCC
Confidence 6677777653 237788844433333322 111223344433356666666544
No 168
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.45 E-value=0.48 Score=44.16 Aligned_cols=66 Identities=11% Similarity=-0.049 Sum_probs=30.9
Q ss_pred EEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeeccccCCCccceEEEEEccCCEEEEEcCCccccccC
Q 014650 117 ISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFG 194 (421)
Q Consensus 117 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~ 194 (421)
++.++.||+.+. ...++.+|..+.+ |+.-. .... .+.++.+ +.+|+.++.+
T Consensus 6 ~v~~~~v~~gs~---------------dg~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~--g~~~v~~s~d------ 58 (369)
T 2hz6_A 6 TLPETLLFVSTL---------------DGSLHAVSKRTGSIKWTLKE--DPVL--QVPTHVE--EPAFLPDPND------ 58 (369)
T ss_dssp --CTTEEEEEET---------------TSEEEEEETTTCCEEEEEEC--CCSC--CCC-------CCEEECTTT------
T ss_pred eeeCCEEEEEcC---------------CCEEEEEECCCCCEEEEecC--CCce--ecceEcC--CCEEEEeCCC------
Confidence 345677776543 1358889987654 76533 1111 1223344 7788876543
Q ss_pred CCCCccceEEEEECCCC--ceEE
Q 014650 195 AAGSRISSVERYDVAKN--EWVS 215 (421)
Q Consensus 195 ~~~~~~~~~~~yd~~t~--~W~~ 215 (421)
..+..+|.+++ .|+.
T Consensus 59 ------g~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 59 ------GSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp ------CCEEEC-----CCSEEC
T ss_pred ------CEEEEEECCCCceeeee
Confidence 23788888765 3653
No 169
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=86.33 E-value=21 Score=33.09 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=64.9
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIA 161 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 161 (421)
..+..+++.......+..-. ....+++.. ++.||+.-- ....++++++.....+.+.
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~-------~~~~gl~~d~~~~~ly~~D~--------------~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDV--------------TLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC-------SCEEEEEEETTTTEEEEEET--------------TTTEEEEEETTSCCEEEEE
T ss_pred ccceeeccCCCcEEEEecCC-------CccEEEEEecCCCeEEEEeC--------------CCCcEEEEecCCCCcEEEE
Confidence 34778888776665543211 122344433 688998853 2357999999887655542
Q ss_pred c--cCCCccceEEEEE--ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEc-cC
Q 014650 162 P--MISPRGSFACAAV--RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAE-ES 234 (421)
Q Consensus 162 ~--~~~~r~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~-~~ 234 (421)
. +..| .++++. + +.||+.-.. ...++++++....-+.+ ..+..| .++++. .+
T Consensus 155 ~~~~~~p---~glavd~~~--g~lY~~d~~------------~~~I~~~~~dg~~~~~l~~~~l~~P----~giavdp~~ 213 (386)
T 3v65_B 155 STGLESP---GGLAVDWVH--DKLYWTDSG------------TSRIEVANLDGAHRKVLLWQSLEKP----RAIALHPME 213 (386)
T ss_dssp CSSCSCC---CCEEEETTT--TEEEEEETT------------TTEEEECBTTSCSCEEEECSSCSCE----EEEEEETTT
T ss_pred eCCCCCc---cEEEEEeCC--CeEEEEcCC------------CCeEEEEeCCCCceEEeecCCCCCC----cEEEEEcCC
Confidence 2 2222 233333 4 899998653 23577777765543332 222333 345554 33
Q ss_pred CeEEEEe
Q 014650 235 GEFWVMG 241 (421)
Q Consensus 235 ~~iyv~G 241 (421)
+.||+.-
T Consensus 214 g~ly~td 220 (386)
T 3v65_B 214 GTIYWTD 220 (386)
T ss_dssp TEEEEEE
T ss_pred CeEEEec
Confidence 7888874
No 170
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.73 E-value=18 Score=31.95 Aligned_cols=99 Identities=8% Similarity=-0.023 Sum_probs=51.9
Q ss_pred eEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc
Q 014650 114 FTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL 192 (421)
Q Consensus 114 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~ 192 (421)
..++.. ++.||+..-. ...+++||+.+.. ...... +..-+++++..+ +++||.....
T Consensus 35 egia~~~~g~lyv~d~~--------------~~~I~~~d~~g~~-~~~~~~--~~~p~gia~~~d-G~l~vad~~~---- 92 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHE--------------VGEIVSITPDGNQ-QIHATV--EGKVSGLAFTSN-GDLVATGWNA---- 92 (306)
T ss_dssp EEEEECTTSCEEEEETT--------------TTEEEEECTTCCE-EEEEEC--SSEEEEEEECTT-SCEEEEEECT----
T ss_pred ceEEECCCCCEEEEeCC--------------CCeEEEECCCCce-EEEEeC--CCCceeEEEcCC-CcEEEEeccC----
Confidence 444443 5678888531 3468999987643 222222 222233444333 7899876421
Q ss_pred cCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEe
Q 014650 193 FGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 193 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~G 241 (421)
....+..||+.+.+.+.+...+..+.. .+.+...++.+|+..
T Consensus 93 ------~~~~v~~~d~~~g~~~~~~~~~~~~~~-~g~~~~~~~~~~v~d 134 (306)
T 2p4o_A 93 ------DSIPVVSLVKSDGTVETLLTLPDAIFL-NGITPLSDTQYLTAD 134 (306)
T ss_dssp ------TSCEEEEEECTTSCEEEEEECTTCSCE-EEEEESSSSEEEEEE
T ss_pred ------CcceEEEEcCCCCeEEEEEeCCCcccc-CcccccCCCcEEEEE
Confidence 012477889888887665444433322 222222225667653
No 171
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=84.83 E-value=35 Score=34.43 Aligned_cols=73 Identities=14% Similarity=0.159 Sum_probs=44.8
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeeccccCCC--------ccceEEEEEccCCEEEEE
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIAPMISP--------RGSFACAAVRSLNQIIVA 184 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~~~iyv~ 184 (421)
+.++.++.||+.... ..++.+|..|.+ |+.-...+.. ....+.++.+ ++||+.
T Consensus 65 ~P~v~~g~vyv~~~~---------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~v~v~ 127 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF---------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK--GKVYVG 127 (689)
T ss_dssp CCEEETTEEEEECGG---------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET--TEEEEE
T ss_pred cCEEECCEEEEEcCC---------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC--CEEEEE
Confidence 345679999987652 348888876654 8754332211 1112345566 888876
Q ss_pred cCCccccccCCCCCccceEEEEECCCCc--eEECC
Q 014650 185 GGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMD 217 (421)
Q Consensus 185 GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~ 217 (421)
... ..+..+|.+|++ |+.-.
T Consensus 128 ~~d-------------g~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 128 VLD-------------GRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp CTT-------------SEEEEEETTTCCEEEEEEC
T ss_pred ccC-------------CEEEEEECCCCCEeeeecC
Confidence 531 248889998876 87643
No 172
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=84.70 E-value=20 Score=31.43 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=41.7
Q ss_pred CeEEEEeCccC--ceeeccccCCCccceEEEEEcc--CCEEEEEcCCccccccCCCCCccceEEEEECCCC-------ce
Q 014650 145 DSAFRFNFLTF--SWERIAPMISPRGSFACAAVRS--LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN-------EW 213 (421)
Q Consensus 145 ~~v~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~-------~W 213 (421)
..+.+||..+. .++.+..+......-.++.+.. ++.+++.|+.+ ..+.+||..+. .|
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d------------g~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD------------KTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT------------SCEEEEEECTTSCTTSSCSE
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC------------CeEEEEecCCCcccccccCc
Confidence 35777776643 3444443332222233333321 15677777754 23777777664 23
Q ss_pred EECCCCCCCCCCeeEEEEccC--CeEEEEeccCC
Q 014650 214 VSMDEMPRFRAGCVGFVAEES--GEFWVMGGYGD 245 (421)
Q Consensus 214 ~~~~~~~~~r~~~~~~~~~~~--~~iyv~GG~~~ 245 (421)
..+..+........++.+..+ +.+.+.|+.++
T Consensus 101 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 101 NKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred ceeeeecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 333222222222334444432 45666666544
No 173
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.57 E-value=37 Score=34.49 Aligned_cols=78 Identities=10% Similarity=0.152 Sum_probs=42.2
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCC--CCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEM--PRFR 223 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~--~~~r 223 (421)
-+++||+.++++....... ...-.+++.-+ +.|++... ..+.+||+.+++.+..... ..+.
T Consensus 83 Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~--g~lWigt~--------------~Gl~~~~~~~~~~~~~~~~~~~l~~ 145 (758)
T 3ott_A 83 GILVYNYRADRYEQPETDF-PTDVRTMALQG--DTLWLGAL--------------NGLYTYQLQSRKLTSFDTRRNGLPN 145 (758)
T ss_dssp EEEEEETTTTEECCCSCCC-CSCEEEEEEET--TEEEEEET--------------TEEEEEETTTCCEEEECHHHHCCSC
T ss_pred CeEEEeCCCCEEECcccCC-CceEEEEEecC--CcEEEEcC--------------CcceeEeCCCCeEEEeccCCCCcCC
Confidence 4789999998887521111 11111222233 77777532 1378899998888765211 0111
Q ss_pred CCeeEEEEccCCeEEEE
Q 014650 224 AGCVGFVAEESGEFWVM 240 (421)
Q Consensus 224 ~~~~~~~~~~~~~iyv~ 240 (421)
....++....++.|++.
T Consensus 146 ~~i~~i~~d~~g~lWig 162 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVG 162 (758)
T ss_dssp SCEEEEEECTTCCEEEE
T ss_pred CeEEEEEEcCCCCEEEE
Confidence 12234444434788884
No 174
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.89 E-value=28 Score=32.44 Aligned_cols=118 Identities=10% Similarity=-0.007 Sum_probs=62.9
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc----e
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS----W 157 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~----W 157 (421)
..+..+|.....+..+.+-. ..-.+++.. ++.||+.--. ...++++++.... .
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~-------~~~~~l~~d~~~~~lywsD~~--------------~~~I~~~~~~g~~~~~~~ 150 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNL-------RNVVALDTEVASNRIYWSDLS--------------QRMICSTQLDRAHGVSSY 150 (400)
T ss_dssp TEEEEECTTSCSCEEEECSC-------SCEEEEEEETTTTEEEEEETT--------------TTEEEEEEC------CCC
T ss_pred ceeEEEccCCcceeEecccc-------CcceEEeeeeccCceEEEecC--------------CCeEEEEEcccCCCCCcc
Confidence 34777888777666552211 223444443 6899988542 3568888876521 2
Q ss_pred eeccccCCCccceEEEEE--ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECC--CCCCCCCCeeEEEEc-
Q 014650 158 ERIAPMISPRGSFACAAV--RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMD--EMPRFRAGCVGFVAE- 232 (421)
Q Consensus 158 ~~~~~~~~~r~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~~~- 232 (421)
..+..- ....-.++++. + +.||+.... ...++++++....-+.+. .+..|+ ++++.
T Consensus 151 ~~~~~~-~~~~p~glavD~~~--~~lY~~d~~------------~~~I~~~~~~g~~~~~l~~~~~~~P~----~iavdp 211 (400)
T 3p5b_L 151 DTVISR-DIQAPDGLAVDWIH--SNIYWTDSV------------LGTVSVADTKGVKRKTLFRENGSKPR----AIVVDP 211 (400)
T ss_dssp EEEECS-SCSCEEEEEEETTT--TEEEEEETT------------TTEEEEECTTTCSEEEEEECSSCCEE----EEEEET
T ss_pred eEEEeC-CCCCcccEEEEecC--CceEEEECC------------CCeEEEEeCCCCceEEEEeCCCCCcc----eEEEec
Confidence 222110 11112234443 4 899998653 235888888876554432 233333 45553
Q ss_pred cCCeEEEEe
Q 014650 233 ESGEFWVMG 241 (421)
Q Consensus 233 ~~~~iyv~G 241 (421)
..+.||+.-
T Consensus 212 ~~g~ly~td 220 (400)
T 3p5b_L 212 VHGFMYWTD 220 (400)
T ss_dssp TTTEEEEEE
T ss_pred ccCeEEEEe
Confidence 237888875
No 175
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=83.85 E-value=24 Score=31.70 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=56.6
Q ss_pred CCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc-CCCccc
Q 014650 92 ANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM-ISPRGS 169 (421)
Q Consensus 92 ~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~-~~~r~~ 169 (421)
.-.+|+.+. ++.. ..-.++... .+.+|++|.. ..+++-.-.-.+|+.+... +.+...
T Consensus 23 ~g~~W~~~~-~~~~-----~~~~~v~~~~~~~~~~~G~~---------------g~i~~s~DgG~tW~~~~~~~~~~~~~ 81 (327)
T 2xbg_A 23 DYNPWEAIQ-LPTT-----ATILDMSFIDRHHGWLVGVN---------------ATLMETRDGGQTWEPRTLVLDHSDYR 81 (327)
T ss_dssp SSCCEEEEE-CSCS-----SCEEEEEESSSSCEEEEETT---------------TEEEEESSTTSSCEECCCCCSCCCCE
T ss_pred CCCCceEee-cCCC-----CcEEEEEECCCCcEEEEcCC---------------CeEEEeCCCCCCCeECCCCCCCCCcc
Confidence 346788874 3322 122233333 4678886531 2366655556789988642 222222
Q ss_pred eEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC-CCCCCeeEEEEccCCeEEEEec
Q 014650 170 FACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP-RFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~~iyv~GG 242 (421)
...+.+.. +.+|++|.. ..+.+-.-.-.+|+.+.... .+. ....+...+++.+|+.|.
T Consensus 82 ~~~i~~~~-~~~~~~g~~-------------g~i~~S~DgG~tW~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 140 (327)
T 2xbg_A 82 FNSVSFQG-NEGWIVGEP-------------PIMLHTTDGGQSWSQIPLDPKLPG-SPRLIKALGNGSAEMITN 140 (327)
T ss_dssp EEEEEEET-TEEEEEEET-------------TEEEEESSTTSSCEECCCCTTCSS-CEEEEEEEETTEEEEEET
T ss_pred EEEEEecC-CeEEEEECC-------------CeEEEECCCCCCceECccccCCCC-CeEEEEEECCCCEEEEeC
Confidence 23333332 788887531 12332222235799876431 121 122333333378888774
No 176
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=83.81 E-value=23 Score=31.48 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=47.8
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeec-c
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERI-A 161 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~-~ 161 (421)
.+..||..+.+-... +... . ..-.+++.. ++.+++.|+. -..+.+||..+.+-... .
T Consensus 96 ~i~v~d~~~~~~~~~--~~~~---~-~~i~~~~~~~~~~~~l~s~~~--------------dg~i~iwd~~~~~~~~~~~ 155 (366)
T 3k26_A 96 IIRIINPITMQCIKH--YVGH---G-NAINELKFHPRDPNLLLSVSK--------------DHALRLWNIQTDTLVAIFG 155 (366)
T ss_dssp EEEEECTTTCCEEEE--EESC---C-SCEEEEEECSSCTTEEEEEET--------------TSCEEEEETTTTEEEEEEC
T ss_pred EEEEEEchhceEeee--ecCC---C-CcEEEEEECCCCCCEEEEEeC--------------CCeEEEEEeecCeEEEEec
Confidence 477888876654322 1110 0 111222222 4567777764 24588999887654322 1
Q ss_pred ccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 162 PMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 162 ~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
.+.........+.+..++..++.|+.+ ..+.+||..+.+
T Consensus 156 ~~~~~~~~v~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~ 194 (366)
T 3k26_A 156 GVEGHRDEVLSADYDLLGEKIMSCGMD------------HSLKLWRINSKR 194 (366)
T ss_dssp STTSCSSCEEEEEECTTSSEEEEEETT------------SCEEEEESCSHH
T ss_pred ccccccCceeEEEECCCCCEEEEecCC------------CCEEEEECCCCc
Confidence 112222222333332225666666653 247788887653
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.46 E-value=22 Score=30.97 Aligned_cols=109 Identities=11% Similarity=-0.025 Sum_probs=55.5
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..++.||+.++ ...+.. +. ..-.+++.. ++.||+.... ...+++||+.+.+.+.+..
T Consensus 50 ~~i~~~~~~~~-~~~~~~-~~------~~~~~l~~~~dg~l~v~~~~--------------~~~i~~~d~~~g~~~~~~~ 107 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH-PS------HHQNGHCLNKQGHLIACSHG--------------LRRLERQREPGGEWESIAD 107 (296)
T ss_dssp TEEEEEETTSC-EEEEES-SC------SSEEEEEECTTCCEEEEETT--------------TTEEEEECSTTCCEEEEEC
T ss_pred CEEEEEECCCC-eEEEEC-CC------CCcceeeECCCCcEEEEecC--------------CCeEEEEcCCCCcEEEEee
Confidence 35889999887 555432 21 122344433 6778776531 2469999998888776543
Q ss_pred cCCC-cc-c-eEEEEEccCCEEEEE----cCCccccccC-CCCCccceEEEEECCCCceEEC
Q 014650 163 MISP-RG-S-FACAAVRSLNQIIVA----GGGSRHSLFG-AAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 163 ~~~~-r~-~-~~~~~~~~~~~iyv~----GG~~~~~~~~-~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
.... .. . ..+++.. ++++|+. |......... ........+++|++. ++...+
T Consensus 108 ~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 108 SFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp EETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred ccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 2111 11 1 1233332 3889987 3311000000 001113468889887 554443
No 178
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=83.20 E-value=23 Score=31.11 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=22.7
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.+||..+.+-...-... .....++.+..++++.+.|+.++.
T Consensus 196 ~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp CEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCCCe
Confidence 3778888887643321111 112233444333677777876653
No 179
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=82.92 E-value=24 Score=31.04 Aligned_cols=79 Identities=10% Similarity=0.110 Sum_probs=38.3
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC-CCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP-RFR 223 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r 223 (421)
..+++|++ +.+.+.+.. +.. ......++.++++|+.... ...+.+||+. ++.+.+.... ..+
T Consensus 67 ~~i~~~~~-~g~~~~~~~-~~~--~~~gl~~d~dG~l~v~~~~------------~~~v~~~~~~-g~~~~~~~~~~~~~ 129 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLD-ATA--FTNGNAVDAQQRLVHCEHG------------RRAITRSDAD-GQAHLLVGRYAGKR 129 (305)
T ss_dssp TEEEEEET-TSCEEEEEE-SCS--CEEEEEECTTSCEEEEETT------------TTEEEEECTT-SCEEEEECEETTEE
T ss_pred CEEEEEeC-CCCEEEEeC-CCC--ccceeeECCCCCEEEEECC------------CCEEEEECCC-CCEEEEEeccCCCc
Confidence 56889988 444443322 111 1222233323788877432 1247778876 5555543211 111
Q ss_pred -CCeeEEEEccCCeEEEE
Q 014650 224 -AGCVGFVAEESGEFWVM 240 (421)
Q Consensus 224 -~~~~~~~~~~~~~iyv~ 240 (421)
.....+++..++.||+.
T Consensus 130 ~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp CSCCCCEEECTTSCEEEE
T ss_pred cCCCCCEEECCCCCEEEe
Confidence 11123444444889985
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=82.71 E-value=39 Score=33.25 Aligned_cols=61 Identities=10% Similarity=-0.034 Sum_probs=36.4
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+||.... .+.+.++|+.|.+-. ..++.+..-|.++.-.+..++|+.+.
T Consensus 166 ~~~~~V~~~~--------------~~~V~viD~~t~~v~--~~i~~g~~p~~v~~SpDGr~lyv~~~------------- 216 (567)
T 1qks_A 166 ENLFSVTLRD--------------AGQIALIDGSTYEIK--TVLDTGYAVHISRLSASGRYLFVIGR------------- 216 (567)
T ss_dssp GGEEEEEETT--------------TTEEEEEETTTCCEE--EEEECSSCEEEEEECTTSCEEEEEET-------------
T ss_pred CceEEEEeCC--------------CCeEEEEECCCCeEE--EEEeCCCCccceEECCCCCEEEEEcC-------------
Confidence 4677777652 467999999887543 23334433444444322156787643
Q ss_pred cceEEEEECC
Q 014650 200 ISSVERYDVA 209 (421)
Q Consensus 200 ~~~~~~yd~~ 209 (421)
...+.+||+.
T Consensus 217 dg~V~viD~~ 226 (567)
T 1qks_A 217 DGKVNMIDLW 226 (567)
T ss_dssp TSEEEEEETT
T ss_pred CCeEEEEECC
Confidence 1358999985
No 181
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=82.65 E-value=20 Score=29.81 Aligned_cols=14 Identities=7% Similarity=0.116 Sum_probs=11.0
Q ss_pred EEEeCCEEEEEccc
Q 014650 116 SISLGPYIYLLGGS 129 (421)
Q Consensus 116 ~~~~~~~iyv~GG~ 129 (421)
++..++.+|+|-|.
T Consensus 11 ~~~~~g~~~fFkg~ 24 (196)
T 3c7x_A 11 VAMLRGEMFVFKER 24 (196)
T ss_dssp EEEETTEEEEEETT
T ss_pred EEEcCCEEEEEECC
Confidence 44678999999884
No 182
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=82.55 E-value=42 Score=33.53 Aligned_cols=66 Identities=8% Similarity=-0.045 Sum_probs=35.6
Q ss_pred CCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC-ceEEC
Q 014650 144 SDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN-EWVSM 216 (421)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~-~W~~~ 216 (421)
...++++|..+.+-..+............+.+..+++..+++..+ .......+..+|..+. ..+.+
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-------~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN-------RAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC-------TTSCEEEEEEEETTTCCEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC-------CCCCeeEEEEEECCCCceeeEE
Confidence 357899999887765544221111222333333225533443332 1233457889999988 66554
No 183
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.65 E-value=34 Score=31.89 Aligned_cols=34 Identities=15% Similarity=0.043 Sum_probs=22.0
Q ss_pred EEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC
Q 014650 171 ACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
...+++.+++||++... ...+.++|++++.-..+
T Consensus 134 ~~la~d~~g~lyv~d~~------------~~~I~~id~~~g~~~~~ 167 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD------------DPRVRLISVDDNKVTTV 167 (409)
T ss_dssp EEEEECSTTEEEEEETT------------TTEEEEEETTTTEEEEE
T ss_pred eEEEEeCCCCEEEEecC------------CCcEEEEECCCCEEEEe
Confidence 33334333889999763 23588999998765544
No 184
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=81.17 E-value=34 Score=31.54 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=14.3
Q ss_pred EEEecCCceEEEeCCCCceeE
Q 014650 315 VFMLDKFDILRYDMGLNRWLK 335 (421)
Q Consensus 315 ~~~~~~~~v~~yd~~~~~W~~ 335 (421)
.|.......++||..+.+-..
T Consensus 335 ~YfFkg~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 335 YYFFQGSNQFEYDFLLQRITK 355 (365)
T ss_dssp EEEEETTEEEEEETTTTEEEE
T ss_pred EEEEeCCEEEEEECCccEEec
Confidence 444444678999988876655
No 185
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=80.77 E-value=30 Score=30.68 Aligned_cols=96 Identities=6% Similarity=0.028 Sum_probs=50.2
Q ss_pred CEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCcc
Q 014650 121 PYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRI 200 (421)
Q Consensus 121 ~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (421)
+.+++.|+. -..+.+||..+........+......-.++.+..++..++.|+.+
T Consensus 54 g~~l~~~~~--------------dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------------ 107 (368)
T 3mmy_A 54 GNFLIAGSW--------------ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD------------ 107 (368)
T ss_dssp SEEEEEEET--------------TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------------
T ss_pred ceEEEEECC--------------CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC------------
Confidence 377777764 246888888774433222222112222233332226666666653
Q ss_pred ceEEEEECCCCceEECCCCCCCCCCeeEEEE--ccCCeEEEEeccCC
Q 014650 201 SSVERYDVAKNEWVSMDEMPRFRAGCVGFVA--EESGEFWVMGGYGD 245 (421)
Q Consensus 201 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~~~iyv~GG~~~ 245 (421)
..+.+||..+.+-..+... .....++.+ ..++.+++.|+.++
T Consensus 108 g~v~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~dg 151 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQH---DAPVKTIHWIKAPNYSCVMTGSWDK 151 (368)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEEEECSSCEEEEEEETTS
T ss_pred CcEEEEEcCCCCceeeccc---cCceEEEEEEeCCCCCEEEEccCCC
Confidence 2588899998876543221 112233333 33367777777654
No 186
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.70 E-value=34 Score=31.28 Aligned_cols=57 Identities=7% Similarity=0.089 Sum_probs=28.9
Q ss_pred CeEEEEeCccCc-e-eeccccCCCccceEEEEEcc-CCEEEEEcCCccccccCCCCCccceEEEEECCCCce
Q 014650 145 DSAFRFNFLTFS-W-ERIAPMISPRGSFACAAVRS-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEW 213 (421)
Q Consensus 145 ~~v~~yd~~t~~-W-~~~~~~~~~r~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W 213 (421)
..+.+||..+.. . ..+..+..-...-.++.+.. ++.+++.|+.+ ..+.+||..++..
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d------------g~v~vw~~~~~~~ 116 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED------------CTVMVWEIPDGGL 116 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT------------SEEEEEECCTTCC
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC------------CeEEEEEccCCCC
Confidence 458888875432 1 11121211122223333321 26777777753 2488889888753
No 187
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.61 E-value=35 Score=31.30 Aligned_cols=127 Identities=16% Similarity=0.103 Sum_probs=61.5
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeecccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPM 163 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 163 (421)
.+..||..+.+-... +... . ..-.+++.. ++..++.|+. -..+.+||..+.+-...-..
T Consensus 146 ~i~iwd~~~~~~~~~--~~~h---~-~~v~~~~~~p~~~~l~s~s~--------------d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 146 LIRIWDIENRKIVMI--LQGH---E-QDIYSLDYFPSGDKLVSGSG--------------DRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp CEEEEETTTTEEEEE--ECCC---S-SCEEEEEECTTSSEEEEEET--------------TSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCcEEEE--EccC---C-CCEEEEEEcCCCCEEEEecC--------------CCcEEEEECCCCeeEEEEEc
Confidence 477888887664332 2211 0 111222222 4555556653 24688899887654332221
Q ss_pred CCCccceEEEEEcc-CCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-CCCCC---CC-CCCeeEEEEccCCeE
Q 014650 164 ISPRGSFACAAVRS-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-MDEMP---RF-RAGCVGFVAEESGEF 237 (421)
Q Consensus 164 ~~~r~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~---~~-r~~~~~~~~~~~~~i 237 (421)
.. ....+.+.. ++++++.|+.+ ..+.+||..+..-.. +.... .. .....++.+..++++
T Consensus 206 ~~---~v~~~~~~~~~~~~l~~~s~d------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~ 270 (393)
T 1erj_A 206 ED---GVTTVAVSPGDGKYIAAGSLD------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS 270 (393)
T ss_dssp SS---CEEEEEECSTTCCEEEEEETT------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE
T ss_pred CC---CcEEEEEECCCCCEEEEEcCC------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE
Confidence 11 122223321 26777787764 237888988776432 21110 11 111233444333677
Q ss_pred EEEeccCCC
Q 014650 238 WVMGGYGDS 246 (421)
Q Consensus 238 yv~GG~~~~ 246 (421)
.+.|+.++.
T Consensus 271 l~s~s~d~~ 279 (393)
T 1erj_A 271 VVSGSLDRS 279 (393)
T ss_dssp EEEEETTSE
T ss_pred EEEEeCCCE
Confidence 777776553
No 188
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=80.36 E-value=30 Score=30.36 Aligned_cols=142 Identities=8% Similarity=0.009 Sum_probs=65.1
Q ss_pred ccCCceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 68 NSQSDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
....++++..+.+ ..+..||..+.+-... +... ...........++..++.|+. -..+
T Consensus 22 sp~~~~l~s~~~d---g~v~lWd~~~~~~~~~--~~~~---~~~v~~~~~~~~~~~l~s~s~--------------d~~i 79 (304)
T 2ynn_A 22 HPTEPWVLTTLYS---GRVELWNYETQVEVRS--IQVT---ETPVRAGKFIARKNWIIVGSD--------------DFRI 79 (304)
T ss_dssp CSSSSEEEEEETT---SEEEEEETTTTEEEEE--EECC---SSCEEEEEEEGGGTEEEEEET--------------TSEE
T ss_pred CCCCCEEEEEcCC---CcEEEEECCCCceeEE--eecc---CCcEEEEEEeCCCCEEEEECC--------------CCEE
Confidence 3455666655543 3477888877654321 1111 001111112225556666664 2468
Q ss_pred EEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCee
Q 014650 148 FRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCV 227 (421)
Q Consensus 148 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~ 227 (421)
.+||..+.+-. ..+..-...-.++.+..++.+++.|+.+ ..+.+||..++. .....+........
T Consensus 80 ~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~sgs~D------------~~v~lWd~~~~~-~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 80 RVFNYNTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDD------------LTVKLWNWENNW-ALEQTFEGHEHFVM 144 (304)
T ss_dssp EEEETTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETT------------SCEEEEEGGGTT-EEEEEECCCCSCEE
T ss_pred EEEECCCCcEE--EEEeCCCCcEEEEEEcCCCCEEEEECCC------------CeEEEEECCCCc-chhhhhcccCCcEE
Confidence 88998776522 1121111112233333225666777754 237778877652 11111111111122
Q ss_pred EEEEc-cCCeEEEEeccCCC
Q 014650 228 GFVAE-ESGEFWVMGGYGDS 246 (421)
Q Consensus 228 ~~~~~-~~~~iyv~GG~~~~ 246 (421)
++.+. .++.+++.|+.++.
T Consensus 145 ~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp EEEECTTCTTEEEEEETTSE
T ss_pred EEEECCCCCCEEEEEeCCCe
Confidence 33332 12567777776653
No 189
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=79.83 E-value=29 Score=29.97 Aligned_cols=14 Identities=7% Similarity=0.278 Sum_probs=9.7
Q ss_pred EEEEEeCCcceeeE
Q 014650 385 FIQIYHPRKKTWRY 398 (421)
Q Consensus 385 ~v~~yd~~~~~W~~ 398 (421)
.|.+||.++++...
T Consensus 247 ~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 247 TVRIWSKENGSLKQ 260 (313)
T ss_dssp EEEEECTTTCCEEE
T ss_pred EEEEEECCCCceeE
Confidence 57888877776543
No 190
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=79.70 E-value=37 Score=31.09 Aligned_cols=96 Identities=10% Similarity=0.135 Sum_probs=48.6
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++..++.|+.+ ..+.+||..+.+-... +..-...-..+.+..++..++.|+.+
T Consensus 134 dg~~l~s~~~d--------------~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d----------- 186 (393)
T 1erj_A 134 DGKFLATGAED--------------RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD----------- 186 (393)
T ss_dssp TSSEEEEEETT--------------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCEEEEEcCC--------------CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-----------
Confidence 56666777642 4588899887653322 11111112222232215555666643
Q ss_pred cceEEEEECCCCceEECCCCCCCCCCeeEEEEcc-CCeEEEEeccCCC
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEE-SGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~~~iyv~GG~~~~ 246 (421)
..+.+||..+.+....-... ....++.+.- ++++++.|+.++.
T Consensus 187 -~~v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 187 -RTVRIWDLRTGQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp -SEEEEEETTTTEEEEEEECS---SCEEEEEECSTTCCEEEEEETTSC
T ss_pred -CcEEEEECCCCeeEEEEEcC---CCcEEEEEECCCCCEEEEEcCCCc
Confidence 34788898887644321111 1122333321 3677777876654
No 191
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.56 E-value=34 Score=30.55 Aligned_cols=55 Identities=2% Similarity=-0.096 Sum_probs=31.5
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
+.+++.|+.+ ..+.+||..+.+-..+....... ...++.+..++.+++.|+.++.
T Consensus 139 ~~~l~s~s~d------------g~i~~wd~~~~~~~~~~~~~~~~-~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 139 TEYFIWADNR------------GTIGFQSYEDDSQYIVHSAKSDV-EYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CCEEEEEETT------------CCEEEEESSSSCEEEEECCCSSC-CCCEEEECTTSCEEEEECTTSC
T ss_pred CCEEEEEeCC------------CcEEEEECCCCcEEEEEecCCCC-ceEEEEECCCCCEEEEEcCCCE
Confidence 6677777754 24788999887754332222111 1234444433778888876654
No 192
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.41 E-value=32 Score=30.13 Aligned_cols=16 Identities=19% Similarity=0.067 Sum_probs=11.6
Q ss_pred CceEEEeCCCCceeEe
Q 014650 321 FDILRYDMGLNRWLKE 336 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~ 336 (421)
..|.+||..+.+....
T Consensus 115 ~~i~v~d~~~~~~~~~ 130 (337)
T 1pby_B 115 TRVALYDAETLSRRKA 130 (337)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCcEEEE
Confidence 6788999987765443
No 193
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=79.35 E-value=26 Score=29.06 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=11.6
Q ss_pred EEEEeCCEEEEEccc
Q 014650 115 TSISLGPYIYLLGGS 129 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~ 129 (421)
+++..++.+|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg~ 25 (195)
T 1itv_A 11 AIAEIGNQLYLFKDG 25 (195)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEEeCCEEEEEECC
Confidence 355679999999884
No 194
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=79.33 E-value=27 Score=29.27 Aligned_cols=25 Identities=12% Similarity=0.065 Sum_probs=18.7
Q ss_pred EEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCccee
Q 014650 352 IVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTW 396 (421)
Q Consensus 352 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 396 (421)
...++++|+|-| +..+.||..+++=
T Consensus 171 f~~~g~~YfFkg--------------------~~y~rf~~~~~~v 195 (207)
T 1pex_A 171 YEKNGYIYFFNG--------------------PIQFEYSIWSNRI 195 (207)
T ss_dssp EEETTEEEEEET--------------------TEEEEEETTTTEE
T ss_pred EEcCCcEEEEEC--------------------CEEEEEeCCccEE
Confidence 346899999987 3578888776653
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.40 E-value=43 Score=31.15 Aligned_cols=137 Identities=9% Similarity=-0.000 Sum_probs=67.5
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEe
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFN 151 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd 151 (421)
..+|+... ....+..+|+.+++-..+..... ....+....++.||+.... ....++++|
T Consensus 142 g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~------~~~ia~~~~g~~l~~~d~~-------------~~~~I~~~d 200 (409)
T 3hrp_A 142 NTVLAYQR--DDPRVRLISVDDNKVTTVHPGFK------GGKPAVTKDKQRVYSIGWE-------------GTHTVYVYM 200 (409)
T ss_dssp TEEEEEET--TTTEEEEEETTTTEEEEEEETCC------BCBCEECTTSSEEEEEBSS-------------TTCEEEEEE
T ss_pred CCEEEEec--CCCcEEEEECCCCEEEEeeccCC------CCceeEecCCCcEEEEecC-------------CCceEEEEE
Confidence 33555443 23457889988776655432221 1111111224567776542 112799999
Q ss_pred CccCce-eeccccC--CCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECC---CCCCCCCC
Q 014650 152 FLTFSW-ERIAPMI--SPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMD---EMPRFRAG 225 (421)
Q Consensus 152 ~~t~~W-~~~~~~~--~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~---~~~~~r~~ 225 (421)
+.+..- ..+..+. ....-+++++..+++.||+... ...+.+||+.+..-..+. ........
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 876542 2331111 1122233333321289999432 235889999887654431 11111112
Q ss_pred ee-EEEEcc-CCeEEEEec
Q 014650 226 CV-GFVAEE-SGEFWVMGG 242 (421)
Q Consensus 226 ~~-~~~~~~-~~~iyv~GG 242 (421)
.. ++++.. ++.||+...
T Consensus 268 P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp SCCEEEEETTTTEEEEEET
T ss_pred ccccEEEeCCCCEEEEEeC
Confidence 01 444432 388999854
No 196
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=77.86 E-value=41 Score=30.59 Aligned_cols=45 Identities=13% Similarity=0.305 Sum_probs=23.1
Q ss_pred eEEEEECCCCceEECC--CCCCCCCC-eeEEEEc-cCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMD--EMPRFRAG-CVGFVAE-ESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~--~~~~~r~~-~~~~~~~-~~~~iyv~GG~~~~ 246 (421)
.+.+||..+++-...- ..+..... ..++.+. .++.+++.|+.++.
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 4778898887644321 22222211 2223332 12678888887654
No 197
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.73 E-value=50 Score=32.61 Aligned_cols=136 Identities=15% Similarity=-0.016 Sum_probs=66.8
Q ss_pred CccEEEeCCC------CcEEECC-CCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCc-cC
Q 014650 84 SSPFLFDAAN------RACRPLP-PLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFL-TF 155 (421)
Q Consensus 84 ~~~~~~d~~~------~~W~~l~-~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~ 155 (421)
.+++.+|..+ .+...+. .-.. .......+-+++.+++...+.... +-....++++|.. +.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~SpDG~~la~~~~~~~~~------~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR------FVTGPRLSPDGRQAVWLAWDHPRM------PWEGTELKTARVTEDG 228 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS------EECCCEECTTSSEEEEEEECTTCC------TTTCEEEEEEEECTTS
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC------cccCceECCCCCEEEEEECCCCCC------CCCCcEEEEEEECCCC
Confidence 4688899887 6666654 2111 111111223454444444322111 0123579999998 56
Q ss_pred ---ceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC------Ce
Q 014650 156 ---SWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA------GC 226 (421)
Q Consensus 156 ---~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~------~~ 226 (421)
+.+++..-. ........+..++++|+.+..+ + ...++.+|..+++++.+........ ..
T Consensus 229 ~~~~~~~l~~~~--~~~~~~~~~spdg~l~~~~~~~--------~--~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 229 RFADTRTLLGGP--EEAIAQAEWAPDGSLIVATDRT--------G--WWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp CEEEEEEEEEET--TBCEEEEEECTTSCEEEEECTT--------S--SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cccccEEeCCCC--CceEcceEECCCCeEEEEECCC--------C--CeEEEEEECCCCceeecccccccccCccccccC
Confidence 333333211 1122222332227787776642 1 2368899998899988755322110 01
Q ss_pred eEEEEccCCeEEEEecc
Q 014650 227 VGFVAEESGEFWVMGGY 243 (421)
Q Consensus 227 ~~~~~~~~~~iyv~GG~ 243 (421)
..+.+..++++++.+..
T Consensus 297 ~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK 313 (662)
T ss_dssp CSEEECTTSCEEEEEBS
T ss_pred ceEeEeCCCEEEEEEEc
Confidence 12333322777776654
No 198
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=77.23 E-value=37 Score=29.76 Aligned_cols=88 Identities=9% Similarity=0.058 Sum_probs=44.1
Q ss_pred EeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCc-cCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCC
Q 014650 118 SLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFL-TFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAA 196 (421)
Q Consensus 118 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 196 (421)
..++.||+... ...+++||+. ...|+.-.+.+ . ..+.+...+ +.||+...
T Consensus 105 ~~~~~l~v~t~---------------~~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~-g~l~vgt~---------- 155 (330)
T 3hxj_A 105 IFEDILYVTSM---------------DGHLYAINTDGTEKWRFKTKKA--I-YATPIVSED-GTIYVGSN---------- 155 (330)
T ss_dssp EETTEEEEECT---------------TSEEEEECTTSCEEEEEECSSC--C-CSCCEECTT-SCEEEECT----------
T ss_pred EECCEEEEEec---------------CCEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCC-CEEEEEcC----------
Confidence 34888887532 2358889887 34466443211 1 122233322 77776432
Q ss_pred CCccceEEEEECCCC-ceEECCCCCCCCCCeeEEEEccCCeEEEEe
Q 014650 197 GSRISSVERYDVAKN-EWVSMDEMPRFRAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 197 ~~~~~~~~~yd~~t~-~W~~~~~~~~~r~~~~~~~~~~~~~iyv~G 241 (421)
...+..||+... .|+.-.+ ... ..+.+...++.||+..
T Consensus 156 ---~~~l~~~d~~g~~~~~~~~~--~~~--~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 156 ---DNYLYAINPDGTEKWRFKTN--DAI--TSAASIGKDGTIYFGS 194 (330)
T ss_dssp ---TSEEEEECTTSCEEEEEECS--SCC--CSCCEECTTCCEEEES
T ss_pred ---CCEEEEECCCCCEeEEEecC--CCc--eeeeEEcCCCEEEEEe
Confidence 124788888722 2654322 111 1223343337788754
No 199
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=77.23 E-value=37 Score=34.18 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=31.9
Q ss_pred EEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCCCCCCC-------CCeeEEEEccCCeEEEEe
Q 014650 173 AAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDEMPRFR-------AGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r-------~~~~~~~~~~~~~iyv~G 241 (421)
++.+ +.||+.... ..+..+|.++.+ |+.-...+... ....+.++.+ ++||+..
T Consensus 74 ~v~~--g~vyv~~~~-------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~v~v~~ 135 (677)
T 1kb0_A 74 VVVD--GIMYVSASW-------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK-GKVYVGA 135 (677)
T ss_dssp EEET--TEEEEECGG-------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET-TEEEEEC
T ss_pred EEEC--CEEEEECCC-------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC-CEEEEEc
Confidence 4567 999988652 358899998875 98754432110 0112344454 7888753
No 200
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.11 E-value=45 Score=30.65 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=34.6
Q ss_pred eEEEEeCcc--CceeeccccCCCccceEEEEEc-cCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 146 SAFRFNFLT--FSWERIAPMISPRGSFACAAVR-SLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 146 ~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
-+++++... .+|+.+.+......-+++++.. +.+.||+.+... ..-..+.+.+-.-.+|+.+..
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g---------~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG---------HLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-----------CCEEEEEESSTTSCCEECSB
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC---------CCCccEEEeCCCCCCceECCc
Confidence 367777654 7898874322222233444331 027888775421 001236666666778998753
No 201
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=76.52 E-value=44 Score=30.27 Aligned_cols=116 Identities=10% Similarity=0.010 Sum_probs=66.3
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
.+..+++.......+.+-. ..-.+++.. ++.||+.-- ....++++++.....+.+..
T Consensus 54 ~I~~i~~~g~~~~~~~~~~-------~~~~~l~~d~~~~~ly~~D~--------------~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNL-------ENAIALDFHHRRELVFWSDV--------------TLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp CEEEECTTSCCEEEEECSC-------SCEEEEEEETTTTEEEEEET--------------TTTEEEEEETTSCSCEEEEC
T ss_pred ceEEEeCCCCeeEEeecCC-------CceEEEEEeccccEEEEEec--------------cCCceEEEecCCCCceEEEe
Confidence 4778888877776553211 122344433 688998753 23579999988766554422
Q ss_pred --cCCCccceEEEEE--ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEc-cCC
Q 014650 163 --MISPRGSFACAAV--RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAE-ESG 235 (421)
Q Consensus 163 --~~~~r~~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~-~~~ 235 (421)
+..| .++++- + +.||+.... ...++++++....-+.+ ..+..| .++++. .++
T Consensus 113 ~~~~~p---~glavd~~~--g~ly~~d~~------------~~~I~~~~~dG~~~~~l~~~~l~~P----~~iavdp~~g 171 (349)
T 3v64_C 113 TGLESP---GGLAVDWVH--DKLYWTDSG------------TSRIEVANLDGAHRKVLLWQSLEKP----RAIALHPMEG 171 (349)
T ss_dssp SSCSCC---CEEEEETTT--TEEEEEETT------------TTEEEEEETTSCSCEEEECTTCSCE----EEEEEETTTT
T ss_pred CCCCCc---cEEEEecCC--CeEEEEcCC------------CCeEEEEcCCCCceEEEEeCCCCCc----ceEEEecCcC
Confidence 2222 234443 4 899998653 23588888876543332 223333 344554 238
Q ss_pred eEEEEec
Q 014650 236 EFWVMGG 242 (421)
Q Consensus 236 ~iyv~GG 242 (421)
.||+...
T Consensus 172 ~ly~td~ 178 (349)
T 3v64_C 172 TIYWTDW 178 (349)
T ss_dssp EEEEEEC
T ss_pred eEEEecc
Confidence 8988753
No 202
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=76.06 E-value=58 Score=31.43 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=24.2
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.+||..+..... ..+........++.+..++++.+.|+.++.
T Consensus 468 ~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 511 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGK 511 (615)
T ss_dssp CEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCe
Confidence 48889988876542 222222222334444333777777776553
No 203
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=75.26 E-value=53 Score=30.59 Aligned_cols=88 Identities=6% Similarity=-0.005 Sum_probs=39.0
Q ss_pred CeEEEEeCc--cCceee-ccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEE--CCCC
Q 014650 145 DSAFRFNFL--TFSWER-IAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS--MDEM 219 (421)
Q Consensus 145 ~~v~~yd~~--t~~W~~-~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~--~~~~ 219 (421)
..+.+||.. +.+-.. +.....+. ...++.+..++..+++|+.+ ..+..++..+..... +..+
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~~------------g~v~~~~~~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSK-RPNAISIAEDDTTVIIADKF------------GDVYSIDINSIPEEKFTQEPI 191 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSS-CEEEEEECTTSSEEEEEETT------------SEEEEEETTSCCCSSCCCCCS
T ss_pred CeEEEEECcCCCCceeeeeecccCCC-CceEEEEcCCCCEEEEEeCC------------CcEEEEecCCcccccccceee
Confidence 457888877 433222 11101111 12233332225666666542 236778876654321 1111
Q ss_pred CCCCCCeeEEEEccC---CeEEEEeccCC
Q 014650 220 PRFRAGCVGFVAEES---GEFWVMGGYGD 245 (421)
Q Consensus 220 ~~~r~~~~~~~~~~~---~~iyv~GG~~~ 245 (421)
........++.+..+ +++++.|+.++
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCC
Confidence 111122233444433 56777777654
No 204
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=74.99 E-value=51 Score=30.25 Aligned_cols=114 Identities=9% Similarity=0.040 Sum_probs=60.7
Q ss_pred CceEEEeCCCCCCCccEEEeCCC--CcEEECCCCCCCCCCCCCcceEEEEe---CCEEEEEcccccCCCCCCCCCCCCCC
Q 014650 71 SDLLCIFPQDPSISSPFLFDAAN--RACRPLPPLPCNPSTYSLCNFTSISL---GPYIYLLGGSHFDARSFPLDRPLPSD 145 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~--~~W~~l~~l~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~ 145 (421)
+..|++.+.. -++.++... .+|+.+.+... ...-++++.. .+.||+.+... . .-.
T Consensus 22 ~g~l~vgt~~----Gl~~~~~~~~g~~W~~~~~~~~-----~~~v~~i~~dp~~~~~l~~g~~~g-~----------~g~ 81 (394)
T 3b7f_A 22 PVMLLVATIK----GAWFLASDPARRTWELRGPVFL-----GHTIHHIVQDPREPERMLMAARTG-H----------LGP 81 (394)
T ss_dssp CCEEEEEETT----EEEEEEECTTSCSEEEEEEEST-----TSEEEEEEECSSSTTCEEEEEEC-------------CCE
T ss_pred CCEEEEEecC----ceEEEECCCCCCCceECCccCC-----CCceEEEEECCCCCCeEEEEecCC-C----------CCc
Confidence 4466665542 266777654 78987632111 1223344443 46788765421 0 112
Q ss_pred eEEEEeCccCceeecccc---CCC--c-------cceEEEEEc-c-CCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 146 SAFRFNFLTFSWERIAPM---ISP--R-------GSFACAAVR-S-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~---~~~--r-------~~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
.+++.+....+|+.+... +.. + .-.++++.. + .+.||+.+.. ..+++.+-...
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-------------ggl~~S~DgG~ 148 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP-------------QGLFRSTDHGA 148 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET-------------TEEEEESSTTS
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC-------------CcEEEEcCCCC
Confidence 588888888999988642 211 1 111233320 0 1778876431 13666666677
Q ss_pred ceEECC
Q 014650 212 EWVSMD 217 (421)
Q Consensus 212 ~W~~~~ 217 (421)
+|+.+.
T Consensus 149 tW~~~~ 154 (394)
T 3b7f_A 149 SWEPVA 154 (394)
T ss_dssp BCEECH
T ss_pred CeEECc
Confidence 899874
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=74.69 E-value=46 Score=29.60 Aligned_cols=90 Identities=11% Similarity=0.020 Sum_probs=50.9
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+|+++.. ...+++||+.+.+.+... ++. .-.+++...+ +++++...
T Consensus 60 ~~~l~~~d~~--------------~~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~d-g~l~v~~~------------- 108 (326)
T 2ghs_A 60 SGTAWWFNIL--------------ERELHELHLASGRKTVHA-LPF--MGSALAKISD-SKQLIASD------------- 108 (326)
T ss_dssp TTEEEEEEGG--------------GTEEEEEETTTTEEEEEE-CSS--CEEEEEEEET-TEEEEEET-------------
T ss_pred CCEEEEEECC--------------CCEEEEEECCCCcEEEEE-CCC--cceEEEEeCC-CeEEEEEC-------------
Confidence 3688888653 246999999887655443 221 1222333222 78877642
Q ss_pred cceEEEEECCCCceEECCCCCCC--CCCeeEEEEccCCeEEEEe
Q 014650 200 ISSVERYDVAKNEWVSMDEMPRF--RAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 200 ~~~~~~yd~~t~~W~~~~~~~~~--r~~~~~~~~~~~~~iyv~G 241 (421)
..+.+||+.+++.+.+...+.. ......+.+..++++|+..
T Consensus 109 -~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 109 -DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp -TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred -CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence 1288999999888765433211 1112334444447888743
No 206
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=74.25 E-value=70 Score=31.47 Aligned_cols=71 Identities=14% Similarity=0.152 Sum_probs=44.6
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc--eeeccccCCC------ccceEEEEEccCCEEEEEcC
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS--WERIAPMISP------RGSFACAAVRSLNQIIVAGG 186 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~~------r~~~~~~~~~~~~~iyv~GG 186 (421)
+.++.++.||+.... ..++.+|..|.+ |+.-...+.. ....+.++.+ ++||+...
T Consensus 63 ~P~v~~g~vyv~~~~---------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~--~~v~~~t~ 125 (582)
T 1flg_A 63 QAIVSDGVIYVTASY---------------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYG--DKVFFGTL 125 (582)
T ss_dssp CCEEETTEEEEEETT---------------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEET--TEEEEEET
T ss_pred ccEEECCEEEEEcCC---------------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEEC--CEEEEEeC
Confidence 345679999988652 238888887654 8764432211 0112344566 88887643
Q ss_pred CccccccCCCCCccceEEEEECCCCc--eEE
Q 014650 187 GSRHSLFGAAGSRISSVERYDVAKNE--WVS 215 (421)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~ 215 (421)
-..+..+|.++.+ |+.
T Consensus 126 -------------dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 126 -------------DASVVALNKNTGKVVWKK 143 (582)
T ss_dssp -------------TTEEEEEESSSCCEEEEE
T ss_pred -------------CCEEEEEECCCCCEEeee
Confidence 1248899999886 875
No 207
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=73.72 E-value=8.3 Score=35.57 Aligned_cols=38 Identities=11% Similarity=0.016 Sum_probs=19.2
Q ss_pred eEEEEECCCCc--eEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 202 SVERYDVAKNE--WVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 202 ~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.+..+|.++++ |+.-. .+. .... ++.+ +.+|+.++.++
T Consensus 20 ~v~a~d~~tG~~~W~~~~---~~~-~s~p-~~~~-g~~~v~~s~dg 59 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE---DPV-LQVP-THVE-EPAFLPDPNDG 59 (369)
T ss_dssp EEEEEETTTCCEEEEEEC---CCS-CCCC-------CCEEECTTTC
T ss_pred EEEEEECCCCCEEEEecC---CCc-eecc-eEcC-CCEEEEeCCCC
Confidence 48889988875 87543 111 1112 2233 67888765443
No 208
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=73.29 E-value=51 Score=30.35 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=30.4
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
+.+++.|+.+ ..+.+||..+.+-...-..+.......++.+..++.+.+.|+.++.
T Consensus 182 ~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 237 (437)
T 3gre_A 182 KSLLVALTNL------------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGI 237 (437)
T ss_dssp CEEEEEEETT------------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSC
T ss_pred CCEEEEEeCC------------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCe
Confidence 6677777653 3588899988764322111101112334444333677777776653
No 209
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=73.21 E-value=47 Score=29.03 Aligned_cols=27 Identities=15% Similarity=0.010 Sum_probs=16.1
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeec
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERI 160 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~ 160 (421)
++..++.|+.+ ..+..++.........
T Consensus 97 dg~~l~s~~~d--------------~~i~~~~~~~~~~~~~ 123 (340)
T 4aow_A 97 DGQFALSGSWD--------------GTLRLWDLTTGTTTRR 123 (340)
T ss_dssp TSSEEEEEETT--------------SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEccc--------------ccceEEeecccceeee
Confidence 45666666642 3577777776654433
No 210
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=72.82 E-value=55 Score=29.68 Aligned_cols=87 Identities=10% Similarity=0.099 Sum_probs=41.2
Q ss_pred CeEEEEeCccCceeecc--ccCCCccc-eEEEEEcc-CCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCC
Q 014650 145 DSAFRFNFLTFSWERIA--PMISPRGS-FACAAVRS-LNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDE 218 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~--~~~~~r~~-~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~ 218 (421)
..+.+||..+.+-...- ..+..... ...+.+.. ++.+++.|+.+ ..+.+||..... -..+..
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D------------~~v~~wd~~~~~~~~~~~~~ 247 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD------------TTVRLWDLRITSRAVRTYHG 247 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT------------SCEEEEETTTTCCCCEEECC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC------------CeEEEEECCCCCcceEEECC
Confidence 35788888776543221 12222111 12222211 16788888864 237788876321 111111
Q ss_pred CCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 219 MPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
......++.+..++..++.|+.++.
T Consensus 248 ---h~~~v~~v~~~p~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 248 ---HEGDINSVKFFPDGQRFGTGSDDGT 272 (380)
T ss_dssp ---CSSCCCEEEECTTSSEEEEECSSSC
T ss_pred ---cCCCeEEEEEecCCCeEEEEcCCCe
Confidence 1111223444333677777776654
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=71.22 E-value=53 Score=28.74 Aligned_cols=141 Identities=9% Similarity=-0.116 Sum_probs=66.2
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
+.+++.+. ....++.|++ +.+...+.... ....+++.. +++||+.... ...+.+|
T Consensus 57 ~~l~~~d~--~~~~i~~~~~-~g~~~~~~~~~-------~~~~gl~~d~dG~l~v~~~~--------------~~~v~~~ 112 (305)
T 3dr2_A 57 RTLVWSDL--VGRRVLGWRE-DGTVDVLLDAT-------AFTNGNAVDAQQRLVHCEHG--------------RRAITRS 112 (305)
T ss_dssp TEEEEEET--TTTEEEEEET-TSCEEEEEESC-------SCEEEEEECTTSCEEEEETT--------------TTEEEEE
T ss_pred CEEEEEEC--CCCEEEEEeC-CCCEEEEeCCC-------CccceeeECCCCCEEEEECC--------------CCEEEEE
Confidence 43444433 2345788888 44444332111 112233333 5778876421 2468888
Q ss_pred eCccCceeeccccCCC-cc--ceEEEEEccCCEEEEE----cCCccccc-cCCCCCccceEEEEECCCCceEECCCCCCC
Q 014650 151 NFLTFSWERIAPMISP-RG--SFACAAVRSLNQIIVA----GGGSRHSL-FGAAGSRISSVERYDVAKNEWVSMDEMPRF 222 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~-r~--~~~~~~~~~~~~iyv~----GG~~~~~~-~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 222 (421)
|+. .+.+.+...... +. -..+++.. ++.||+. |-...... ..........+++||+++++.+.+.. ..
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~--~~ 188 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD--LD 188 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE--ES
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec--CC
Confidence 885 555554332111 11 11233332 3889986 32110000 00011123578999998888776541 11
Q ss_pred CCCeeEEEEc-cCCeEEEEec
Q 014650 223 RAGCVGFVAE-ESGEFWVMGG 242 (421)
Q Consensus 223 r~~~~~~~~~-~~~~iyv~GG 242 (421)
...++++. ++..||+...
T Consensus 189 --~p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 189 --HPNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp --SEEEEEECTTSSEEEEEEC
T ss_pred --CCcceEEcCCCCEEEEEec
Confidence 12233343 3245888754
No 212
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=69.67 E-value=35 Score=29.59 Aligned_cols=45 Identities=11% Similarity=0.136 Sum_probs=26.9
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.++|.++++-..+-.+........++.+..+++..+.|+.++.
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 488899998876554333322222334444444778888887653
No 213
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=69.53 E-value=62 Score=28.87 Aligned_cols=133 Identities=10% Similarity=0.043 Sum_probs=65.8
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCC-CCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLP-CNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFR 149 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~-~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~ 149 (421)
...+++.|... .++.-.-.-.+|+.+.... .+ .....+++..++.+|++|.. ..+++
T Consensus 46 ~~~~~~~G~~g---~i~~s~DgG~tW~~~~~~~~~~----~~~~~~i~~~~~~~~~~g~~---------------g~i~~ 103 (327)
T 2xbg_A 46 RHHGWLVGVNA---TLMETRDGGQTWEPRTLVLDHS----DYRFNSVSFQGNEGWIVGEP---------------PIMLH 103 (327)
T ss_dssp SSCEEEEETTT---EEEEESSTTSSCEECCCCCSCC----CCEEEEEEEETTEEEEEEET---------------TEEEE
T ss_pred CCcEEEEcCCC---eEEEeCCCCCCCeECCCCCCCC----CccEEEEEecCCeEEEEECC---------------CeEEE
Confidence 44455555421 2333333346899885321 11 11223444556788887531 24555
Q ss_pred EeCccCceeeccccC-CCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeE
Q 014650 150 FNFLTFSWERIAPMI-SPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVG 228 (421)
Q Consensus 150 yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 228 (421)
-+-.-++|+.+.... .+-..+.++...+ +.+|++|... .+++-.-.-.+|+.+..... . ....
T Consensus 104 S~DgG~tW~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~g-------------~v~~S~DgG~tW~~~~~~~~-~-~~~~ 167 (327)
T 2xbg_A 104 TTDGGQSWSQIPLDPKLPGSPRLIKALGN-GSAEMITNVG-------------AIYRTKDSGKNWQALVQEAI-G-VMRN 167 (327)
T ss_dssp ESSTTSSCEECCCCTTCSSCEEEEEEEET-TEEEEEETTC-------------CEEEESSTTSSEEEEECSCC-C-CEEE
T ss_pred ECCCCCCceECccccCCCCCeEEEEEECC-CCEEEEeCCc-------------cEEEEcCCCCCCEEeecCCC-c-ceEE
Confidence 444567899876431 1212234444443 7888877521 13332222457988754222 1 2233
Q ss_pred EEEccCCeEEEEe
Q 014650 229 FVAEESGEFWVMG 241 (421)
Q Consensus 229 ~~~~~~~~iyv~G 241 (421)
+....++.+|++|
T Consensus 168 ~~~~~~~~~~~~g 180 (327)
T 2xbg_A 168 LNRSPSGEYVAVS 180 (327)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEEcCCCcEEEEE
Confidence 4444336777665
No 214
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=69.04 E-value=85 Score=30.24 Aligned_cols=58 Identities=14% Similarity=0.094 Sum_probs=31.2
Q ss_pred CceEEEeCCCCceeEecccCCC--CCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeE
Q 014650 321 FDILRYDMGLNRWLKETTIPEI--RPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRY 398 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~--~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 398 (421)
..|.+||..+.+.... +... .....-.+++..++..++.++.++ .|.+||.++.+-..
T Consensus 229 g~i~vwd~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~------------------~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKY--IEDDQEPVQGGIFALSWLDSQKFATVGADA------------------TIRVWDVTTSKCVQ 288 (615)
T ss_dssp CCEEEEETTTCCEEEE--CCBTTBCCCSCEEEEEESSSSEEEEEETTS------------------EEEEEETTTTEEEE
T ss_pred CeEEEEECCCCCEeEE--ecccccccCCceEEEEEcCCCEEEEEcCCC------------------cEEEEECCCCcEEE
Confidence 4677888776554332 2110 001112222222778888887652 57888887665433
No 215
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=68.67 E-value=61 Score=28.48 Aligned_cols=54 Identities=9% Similarity=0.173 Sum_probs=29.3
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
+..++.|+.+ ..+.+||..+++-... +........++.+..++.+.+.|+.++.
T Consensus 77 g~~l~s~s~D------------~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 77 GAYALSASWD------------KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp SSEEEEEETT------------SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred CCEEEEEeCC------------CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 6666777754 3488899988763221 1111112233444333677777776654
No 216
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=66.93 E-value=72 Score=28.61 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=37.6
Q ss_pred ceEEEeCCCCceeEecccCCCCCCCCceEEEEe-CCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEec
Q 014650 322 DILRYDMGLNRWLKETTIPEIRPCKKPLGFIVL-DGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIF 400 (421)
Q Consensus 322 ~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~ 400 (421)
.|+++|..+.+.+.+..++. .. ....- +++++++++....... ...+ .........|+.+|+.+++.+.+.
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~-~~~~-~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAPVDV-ADAD-SYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS-----EE-EEEECSSSSEEEEEECCC------------CCCCCCEEEEEETTTTBCCEEE
T ss_pred eEEEEECCCCCeEEeeeCCC-----CC-CCccCCCCceEEEecCCcceee-cccc-ccccCCCCcEEEEecccCceEEcc
Confidence 38899998888777655432 11 22333 7777776543210000 0000 000011247899999888877664
Q ss_pred c
Q 014650 401 T 401 (421)
Q Consensus 401 ~ 401 (421)
.
T Consensus 337 ~ 337 (396)
T 3c5m_A 337 K 337 (396)
T ss_dssp E
T ss_pred C
Confidence 3
No 217
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=66.84 E-value=72 Score=28.60 Aligned_cols=126 Identities=12% Similarity=0.142 Sum_probs=61.1
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
.+..||..+.+.... +... ......+.. ++..++.|+.+ ..+.+||..+.+-...-.
T Consensus 221 ~v~~wd~~~~~~~~~--~~~h-----~~~v~~v~~~p~~~~l~s~s~D--------------~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQA--FETH-----ESDVNSVRYYPSGDAFASGSDD--------------ATCRLYDLRADREVAIYS 279 (354)
T ss_dssp CEEEEETTTCCEEEE--ECCC-----SSCEEEEEECTTSSEEEEEETT--------------SCEEEEETTTTEEEEEEC
T ss_pred eEEEEECCCCcEEEE--ecCC-----CCCeEEEEEeCCCCEEEEEeCC--------------CeEEEEECCCCcEEEEEc
Confidence 477888887765432 1110 111222222 45667777642 358888887654222111
Q ss_pred cCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEec
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG 242 (421)
..........+.+..++.+.+.|+.+ ..+.+||..+.+=.. .+........++.+..+++.++.|+
T Consensus 280 ~~~~~~~~~~~~~s~~g~~l~~g~~d------------~~i~vwd~~~~~~~~--~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 280 KESIIFGASSVDFSLSGRLLFAGYND------------YTINVWDVLKGSRVS--ILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTCSEEE--EECCCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCcccceeEEEEeCCCCEEEEEECC------------CcEEEEECCCCceEE--EEECCCCcEEEEEECCCCCEEEEEc
Confidence 11112222333333226677777653 247889987765221 1111111223344433367777777
Q ss_pred cCC
Q 014650 243 YGD 245 (421)
Q Consensus 243 ~~~ 245 (421)
.++
T Consensus 346 ~D~ 348 (354)
T 2pbi_B 346 WDH 348 (354)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 218
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=66.79 E-value=66 Score=28.17 Aligned_cols=95 Identities=7% Similarity=-0.132 Sum_probs=54.9
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..++.||+... .......+ ..-++++.. ++.|||..... ....+++||+.+.+.+.+..
T Consensus 53 ~~I~~~d~~g~-~~~~~~~~-------~~p~gia~~~dG~l~vad~~~------------~~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 53 GEIVSITPDGN-QQIHATVE-------GKVSGLAFTSNGDLVATGWNA------------DSIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp TEEEEECTTCC-EEEEEECS-------SEEEEEEECTTSCEEEEEECT------------TSCEEEEEECTTSCEEEEEE
T ss_pred CeEEEECCCCc-eEEEEeCC-------CCceeEEEcCCCcEEEEeccC------------CcceEEEEcCCCCeEEEEEe
Confidence 45788988764 32221222 122344443 56788875421 01258889988888877766
Q ss_pred cCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
.+..+.....+.... +.+|+.... ...++++|+.+.
T Consensus 113 ~~~~~~~~g~~~~~~-~~~~v~d~~------------~g~i~~~d~~~~ 148 (306)
T 2p4o_A 113 LPDAIFLNGITPLSD-TQYLTADSY------------RGAIWLIDVVQP 148 (306)
T ss_dssp CTTCSCEEEEEESSS-SEEEEEETT------------TTEEEEEETTTT
T ss_pred CCCccccCcccccCC-CcEEEEECC------------CCeEEEEeCCCC
Confidence 555555445544432 677776431 236888998764
No 219
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=66.52 E-value=76 Score=28.75 Aligned_cols=155 Identities=10% Similarity=0.064 Sum_probs=76.0
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCC--CCCCCcceEEEE----eCCEEEEEccc--ccCCCCCCCCCCC
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNP--STYSLCNFTSIS----LGPYIYLLGGS--HFDARSFPLDRPL 142 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~--~~~~r~~~~~~~----~~~~iyv~GG~--~~~~~~~~~~~~~ 142 (421)
...+|+..- ....+..+||..+.-..+ .++... ........++.. -.++|+++.-. ..+.. .....
T Consensus 24 ~g~~~vs~l--~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~---g~~~~ 97 (334)
T 2p9w_A 24 RQVFYQSNL--YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA---DQSSH 97 (334)
T ss_dssp TTEEEEEET--TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT---SCCSS
T ss_pred CCEEEEEec--cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc---ccccC
Confidence 355555432 224578899986654444 333200 000112234555 25788886211 11100 01112
Q ss_pred CCCeEEEEeCc---cCc--eee-ccccCCC-------cc-ceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEEC
Q 014650 143 PSDSAFRFNFL---TFS--WER-IAPMISP-------RG-SFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDV 208 (421)
Q Consensus 143 ~~~~v~~yd~~---t~~--W~~-~~~~~~~-------r~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~ 208 (421)
....+.+||+. |.+ |.. ++..... +. ...-++++..|.+||.+... ...++++++
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----------~~~I~rV~p 166 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----------MPAIARVSA 166 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----------SCEEEEECT
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----------CCeEEEEeC
Confidence 35679999987 443 432 2221111 22 23333444348999986642 145888888
Q ss_pred CCCc---eEECCCCCCCCCCeeEEEEc-cCCeEEEEec
Q 014650 209 AKNE---WVSMDEMPRFRAGCVGFVAE-ESGEFWVMGG 242 (421)
Q Consensus 209 ~t~~---W~~~~~~~~~r~~~~~~~~~-~~~~iyv~GG 242 (421)
.-.. |-.-.+....+.+..++++. +++.|++..+
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 7543 54433333445566677776 3245666655
No 220
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=66.26 E-value=1.1e+02 Score=30.47 Aligned_cols=64 Identities=11% Similarity=0.077 Sum_probs=32.6
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+.+ ..+.+||..+.+-.+. +..-...-.++.+..++..++.|+.+
T Consensus 441 ~g~~l~sgs~D--------------g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D----------- 493 (694)
T 3dm0_A 441 DGQFALSGSWD--------------GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRD----------- 493 (694)
T ss_dssp TSSEEEEEETT--------------SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETT-----------
T ss_pred CCCEEEEEeCC--------------CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCC-----------
Confidence 56667777642 4688899877543221 11111111222332225666666653
Q ss_pred cceEEEEECCCC
Q 014650 200 ISSVERYDVAKN 211 (421)
Q Consensus 200 ~~~~~~yd~~t~ 211 (421)
..+.++|....
T Consensus 494 -~~i~iwd~~~~ 504 (694)
T 3dm0_A 494 -RTIKLWNTLGE 504 (694)
T ss_dssp -SCEEEECTTSC
T ss_pred -CEEEEEECCCC
Confidence 23677776554
No 221
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=65.09 E-value=72 Score=27.98 Aligned_cols=45 Identities=9% Similarity=0.240 Sum_probs=23.3
Q ss_pred ceEEEEECCCCceEECCCCCCCCCCeeEEEEccC---CeEEEEeccCCC
Q 014650 201 SSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEES---GEFWVMGGYGDS 246 (421)
Q Consensus 201 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~---~~iyv~GG~~~~ 246 (421)
..+.+||..+++.......... ....++.+..+ +.+++.|+.++.
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKA-KPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEES-SCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred cEEEEEeCCCCcccceeeeccc-CcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4588889888776543222111 12233444332 366677766543
No 222
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=64.78 E-value=73 Score=27.96 Aligned_cols=43 Identities=9% Similarity=0.123 Sum_probs=21.7
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.+||..+.+-... +........++.+..++++.+.||.++.
T Consensus 177 ~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 177 MVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp CEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 477888877553221 1111112233444333677777776653
No 223
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=64.07 E-value=89 Score=28.68 Aligned_cols=81 Identities=4% Similarity=-0.047 Sum_probs=44.9
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECC--CCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMD--EMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~ 222 (421)
..+.++++.......+.+ ....-.+++....++.||+..-. ...+.++++.....+.+. .+..|
T Consensus 96 ~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~~~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGLESP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCCEEEEECSSCSCC
T ss_pred ccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC------------CCcEEEEecCCCCcEEEEeCCCCCc
Confidence 357788887766554432 12222334433122789998543 245889999887665542 22222
Q ss_pred CCCeeEEEEc-cCCeEEEEecc
Q 014650 223 RAGCVGFVAE-ESGEFWVMGGY 243 (421)
Q Consensus 223 r~~~~~~~~~-~~~~iyv~GG~ 243 (421)
.++++. ..+.||+.-..
T Consensus 162 ----~glavd~~~g~lY~~d~~ 179 (386)
T 3v65_B 162 ----GGLAVDWVHDKLYWTDSG 179 (386)
T ss_dssp ----CCEEEETTTTEEEEEETT
T ss_pred ----cEEEEEeCCCeEEEEcCC
Confidence 233443 23889998643
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=63.60 E-value=55 Score=33.00 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=33.1
Q ss_pred CceEEEeCCCC--ceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcce--e
Q 014650 321 FDILRYDMGLN--RWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKT--W 396 (421)
Q Consensus 321 ~~v~~yd~~~~--~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~--W 396 (421)
..+..+|..+. .|+.-.............+.++.++.||+-.+.... .....|+.||.++++ |
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~-------------~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF-------------GVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT-------------CCBCEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc-------------CCCCEEEEEECCCCcEEE
Confidence 35667776654 366543201100011223445678888874321110 011378999998775 7
Q ss_pred eE
Q 014650 397 RY 398 (421)
Q Consensus 397 ~~ 398 (421)
+.
T Consensus 198 ~~ 199 (689)
T 1yiq_A 198 RF 199 (689)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 225
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.19 E-value=81 Score=27.94 Aligned_cols=12 Identities=17% Similarity=0.171 Sum_probs=8.4
Q ss_pred ccEEEeCCCCcE
Q 014650 85 SPFLFDAANRAC 96 (421)
Q Consensus 85 ~~~~~d~~~~~W 96 (421)
.+..||..+.+.
T Consensus 99 ~v~lwd~~~~~~ 110 (343)
T 2xzm_R 99 TLRLWDLRTGTT 110 (343)
T ss_dssp EEEEEETTSSCE
T ss_pred cEEEEECCCCcE
Confidence 477888877654
No 226
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=63.00 E-value=69 Score=27.09 Aligned_cols=19 Identities=11% Similarity=-0.071 Sum_probs=15.7
Q ss_pred eCCeEEEEEeecCCCccccccccccccceeeEEEEEeCC
Q 014650 354 LDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPR 392 (421)
Q Consensus 354 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 392 (421)
.++++|+|-| +..+.||..
T Consensus 179 ~~g~~YfFkG--------------------~~ywr~d~~ 197 (225)
T 3oyo_A 179 KEPEAYLFKG--------------------QNYVRIDFT 197 (225)
T ss_dssp STTEEEEEET--------------------TEEEEEECC
T ss_pred CCCEEEEEEC--------------------CEEEEEeCC
Confidence 4789999998 368899987
No 227
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=62.79 E-value=48 Score=33.54 Aligned_cols=52 Identities=10% Similarity=0.065 Sum_probs=27.2
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAK 210 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t 210 (421)
..+.++++.+.....+... ...-+++++....+.||+.-.. ...+.++++..
T Consensus 386 ~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~~------------~~~I~~~~~~g 437 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDR 437 (699)
T ss_dssp TC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCTT------------TTSBEEEESCC
T ss_pred cceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEecC------------CCeEEEEecCC
Confidence 3566777777665544321 2222334443111789988543 23477788765
No 228
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=62.51 E-value=1.3e+02 Score=30.03 Aligned_cols=58 Identities=7% Similarity=0.031 Sum_probs=32.4
Q ss_pred CeEEEEeCccC---ceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 145 DSAFRFNFLTF---SWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 145 ~~v~~yd~~t~---~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
..++++|..+. +-+.+..... ......+..+++.++++.. ..++++|..+++...+..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~---~~~~~~~SPDG~~la~~~~-------------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEG---FATDAKLSPKGGFVSFIRG-------------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSS---CEEEEEECTTSSEEEEEET-------------TEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcceEEEcccCCc---ccccccCCCCCCEEEEEeC-------------CcEEEEecCCCCEEEecc
Confidence 46999999887 5444433211 1222333222554444331 158899998887776644
No 229
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=61.15 E-value=84 Score=27.40 Aligned_cols=43 Identities=2% Similarity=0.015 Sum_probs=24.8
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCC
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGS 367 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~ 367 (421)
..|.+||..+.+- +..+.... ...-.+++ .++++++.|+.++.
T Consensus 273 g~i~vwd~~~~~~--~~~~~~~h-~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 273 GIISCWNLQTRKK--IKNFAKFN-EDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp SCEEEEETTTTEE--EEECCCCS-SSEEEEEE-ECSSEEEEEEECTH
T ss_pred ceEEEEcCccHhH--hhhhhccc-CCCceEec-CCCCeEEEEecCCc
Confidence 4678888877543 32232210 11223445 78888888988765
No 230
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=59.20 E-value=95 Score=27.43 Aligned_cols=83 Identities=7% Similarity=0.003 Sum_probs=43.4
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceE--ECCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWV--SMDEMPRF 222 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~--~~~~~~~~ 222 (421)
..+.+||..+.+-........... ..++.+..++.+++.|+.+ ..+.+||..+.+-. .+.. . .
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~-i~~~~~~pdg~~lasg~~d------------g~i~iwd~~~~~~~~~~~~~-~-h 213 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVE-YSSGVLHKDSLLLALYSPD------------GILDVYNLSSPDQASSRFPV-D-E 213 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCC-CCEEEECTTSCEEEEECTT------------SCEEEEESSCTTSCCEECCC-C-T
T ss_pred CcEEEEECCCCcEEEEEecCCCCc-eEEEEECCCCCEEEEEcCC------------CEEEEEECCCCCCCccEEec-c-C
Confidence 358889988776543322222211 2233333227788888864 24889999887632 2221 0 1
Q ss_pred CCCeeEEEEccCCeEEEEec
Q 014650 223 RAGCVGFVAEESGEFWVMGG 242 (421)
Q Consensus 223 r~~~~~~~~~~~~~iyv~GG 242 (421)
.....++.+..++...+.|+
T Consensus 214 ~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 214 EAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp TSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEeCCCCEEEEEe
Confidence 11233444443366666666
No 231
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=58.42 E-value=1.1e+02 Score=28.08 Aligned_cols=18 Identities=6% Similarity=0.314 Sum_probs=12.3
Q ss_pred EEEEcCCccccccCCCCCccceEEEEECCC
Q 014650 181 IIVAGGGSRHSLFGAAGSRISSVERYDVAK 210 (421)
Q Consensus 181 iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t 210 (421)
+++.|+.+ ..+.+||..+
T Consensus 196 ~l~s~~~d------------g~i~vwd~~~ 213 (430)
T 2xyi_A 196 YLLSASDD------------HTICLWDINA 213 (430)
T ss_dssp EEEEECTT------------SCEEEEETTS
T ss_pred eEEEEeCC------------CeEEEEeCCC
Confidence 66777753 2377888877
No 232
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=57.27 E-value=1e+02 Score=27.06 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=31.1
Q ss_pred ceEEEEEccC---CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 169 SFACAAVRSL---NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 169 ~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.-.++.+..+ +.+++.|+.+ ..+.+||..+........+........++.+..++...+.|+.++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~d------------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWA------------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETT------------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEEcCCCCCceEEEEECCC------------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 3344444432 2677777753 247888887743322111111111223344433366666676554
No 233
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=56.52 E-value=1.6e+02 Score=29.27 Aligned_cols=130 Identities=3% Similarity=-0.102 Sum_probs=57.9
Q ss_pred CceEEEeCCC--CCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEE--eCCEEEEEcccccCCCCCCCCCCCCCCe
Q 014650 71 SDLLCIFPQD--PSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSIS--LGPYIYLLGGSHFDARSFPLDRPLPSDS 146 (421)
Q Consensus 71 ~~~~~~~g~~--~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 146 (421)
.++++.+... .....+|..+.....|+.+.+...-. .-......... -+++.+++....... -...
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a-~~~~~~~~~~~~SPDG~~la~~~~~~G~---------~~~~ 148 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWS-KDGTVSLGTWAVSWDGKKVAFAQKPNAA---------DEAV 148 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSS-SSSCEEEEEEEECTTSSEEEEEEEETTC---------SCCE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhc-cCCCEEEEEEEECCCCCEEEEEECCCCC---------ceEE
Confidence 4445444332 12345678887777787764422100 00001112222 255655554332111 2357
Q ss_pred EEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccc-cCCCCCccceEEEEECCCCc
Q 014650 147 AFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSL-FGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 147 v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~~~~~~~~yd~~t~~ 212 (421)
++++|..+.+......++.... .......+++.++++..+.... ..........+++++..+..
T Consensus 149 i~v~dl~tg~~~~~~~~~~~~~--~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 149 LHVIDVDSGEWSKVDVIEGGKY--ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp EEEEETTTCCBCSSCCBSCCTT--CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred EEEEECCCCCCcCCcccCcccc--cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 9999999988652112222221 2223322255444444321000 00001234568888888775
No 234
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=56.05 E-value=81 Score=26.70 Aligned_cols=51 Identities=16% Similarity=0.287 Sum_probs=28.2
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEE-----CC-CCCC------CCCCeeEEEEccCCeEEEEecc
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS-----MD-EMPR------FRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~-----~~-~~~~------~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
+++|++-|.. .++||..+++=.. +. -+|. +..-.+++....++++|+|-|.
T Consensus 130 ~k~yfFkG~~--------------yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~ 192 (227)
T 3lp9_A 130 KEVYLFKGDQ--------------YARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD 192 (227)
T ss_dssp TEEEEEETTE--------------EEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT
T ss_pred CEEEEEECCE--------------EEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC
Confidence 8999998843 7888877553211 10 0121 1212233333344899999874
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=55.07 E-value=1.1e+02 Score=26.66 Aligned_cols=122 Identities=14% Similarity=0.137 Sum_probs=58.5
Q ss_pred CceEEEeCCCCCCCccEEEeCC-CCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAA-NRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~-~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
+..+++...+ ..+++||+. ...|..-.+.+ ...+.+.. ++.||+... ...++
T Consensus 107 ~~~l~v~t~~---~~l~~~d~~g~~~~~~~~~~~--------~~~~~~~~~~g~l~vgt~---------------~~~l~ 160 (330)
T 3hxj_A 107 EDILYVTSMD---GHLYAINTDGTEKWRFKTKKA--------IYATPIVSEDGTIYVGSN---------------DNYLY 160 (330)
T ss_dssp TTEEEEECTT---SEEEEECTTSCEEEEEECSSC--------CCSCCEECTTSCEEEECT---------------TSEEE
T ss_pred CCEEEEEecC---CEEEEEcCCCCEEEEEcCCCc--------eeeeeEEcCCCEEEEEcC---------------CCEEE
Confidence 5556665432 347889987 44565432211 11222333 677776432 24588
Q ss_pred EEeCccC-ceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCC-CceEECCCCCCCCCCe
Q 014650 149 RFNFLTF-SWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAK-NEWVSMDEMPRFRAGC 226 (421)
Q Consensus 149 ~yd~~t~-~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~r~~~ 226 (421)
+||+... .|..-. +... ..+.+...+ +.||+.. . .+.+||... ..|+...... ..
T Consensus 161 ~~d~~g~~~~~~~~--~~~~-~~~~~~d~~-g~l~v~t--~-------------~l~~~d~~g~~~~~~~~~~~----~~ 217 (330)
T 3hxj_A 161 AINPDGTEKWRFKT--NDAI-TSAASIGKD-GTIYFGS--D-------------KVYAINPDGTEKWNFYAGYW----TV 217 (330)
T ss_dssp EECTTSCEEEEEEC--SSCC-CSCCEECTT-CCEEEES--S-------------SEEEECTTSCEEEEECCSSC----CC
T ss_pred EECCCCCEeEEEec--CCCc-eeeeEEcCC-CEEEEEe--C-------------EEEEECCCCcEEEEEccCCc----ce
Confidence 8998722 255432 1221 122233222 7788765 1 267788332 2376543211 12
Q ss_pred eEEEEccCCeEEEEe
Q 014650 227 VGFVAEESGEFWVMG 241 (421)
Q Consensus 227 ~~~~~~~~~~iyv~G 241 (421)
.+.+...++.||+..
T Consensus 218 ~~~~~~~~g~l~v~t 232 (330)
T 3hxj_A 218 TRPAISEDGTIYVTS 232 (330)
T ss_dssp SCCEECTTSCEEEEE
T ss_pred eceEECCCCeEEEEc
Confidence 233344336788753
No 236
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=54.11 E-value=1.2e+02 Score=27.19 Aligned_cols=80 Identities=4% Similarity=-0.032 Sum_probs=43.9
Q ss_pred eEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECC--CCCCCC
Q 014650 146 SAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMD--EMPRFR 223 (421)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r 223 (421)
.+.++++.......+.+ ....-.+++....++.||+..-. ...+.++++....-+.+. .+..|
T Consensus 54 ~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~~------------~~~I~r~~~~g~~~~~~~~~~~~~p- 118 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------------LDRILRANLNGSNVEEVVSTGLESP- 118 (349)
T ss_dssp CEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSCSCC-
T ss_pred ceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEecc------------CCceEEEecCCCCceEEEeCCCCCc-
Confidence 47777777766554432 11222333333122889998543 245888998877655432 22222
Q ss_pred CCeeEEEEc-cCCeEEEEecc
Q 014650 224 AGCVGFVAE-ESGEFWVMGGY 243 (421)
Q Consensus 224 ~~~~~~~~~-~~~~iyv~GG~ 243 (421)
.++++. .++.||+.-..
T Consensus 119 ---~glavd~~~g~ly~~d~~ 136 (349)
T 3v64_C 119 ---GGLAVDWVHDKLYWTDSG 136 (349)
T ss_dssp ---CEEEEETTTTEEEEEETT
T ss_pred ---cEEEEecCCCeEEEEcCC
Confidence 344443 23889988643
No 237
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=53.74 E-value=1.4e+02 Score=27.54 Aligned_cols=14 Identities=7% Similarity=0.363 Sum_probs=10.5
Q ss_pred EEEEEeCCcceeeE
Q 014650 385 FIQIYHPRKKTWRY 398 (421)
Q Consensus 385 ~v~~yd~~~~~W~~ 398 (421)
.|.+|++..+.+..
T Consensus 402 ~i~iw~~~~~~~~~ 415 (430)
T 2xyi_A 402 IMQVWQMAENVYND 415 (430)
T ss_dssp EEEEEEECHHHHCC
T ss_pred CEEEeEcccccccC
Confidence 67888888777754
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=53.41 E-value=1.2e+02 Score=26.78 Aligned_cols=111 Identities=12% Similarity=-0.026 Sum_probs=58.5
Q ss_pred ceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEE-EeCCEEEEEcccccCCCCCCCCCCCCCCeEEEE
Q 014650 72 DLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSI-SLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRF 150 (421)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~y 150 (421)
..+|+.+.. ...++.||+.+++...+. ++. .-.+++ .-++.+|+... ..+++|
T Consensus 61 ~~l~~~d~~--~~~i~~~d~~~~~~~~~~-~~~-------~v~~i~~~~dg~l~v~~~----------------~gl~~~ 114 (326)
T 2ghs_A 61 GTAWWFNIL--ERELHELHLASGRKTVHA-LPF-------MGSALAKISDSKQLIASD----------------DGLFLR 114 (326)
T ss_dssp TEEEEEEGG--GTEEEEEETTTTEEEEEE-CSS-------CEEEEEEEETTEEEEEET----------------TEEEEE
T ss_pred CEEEEEECC--CCEEEEEECCCCcEEEEE-CCC-------cceEEEEeCCCeEEEEEC----------------CCEEEE
Confidence 445554432 245889999887765442 221 112233 34678777542 248999
Q ss_pred eCccCceeeccccCCC--ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC
Q 014650 151 NFLTFSWERIAPMISP--RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 151 d~~t~~W~~~~~~~~~--r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
|+.+.+.+.+...+.. ........++.++++|+..... ........+++|| +.+.+.+
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~------~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR------KAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET------TCCTTCEEEEEEE--TTEEEEE
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC------cCCCCceEEEEEe--CCcEEEe
Confidence 9998888766543221 1122233333337887643211 0112345688888 4555443
No 239
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=53.39 E-value=1.4e+02 Score=27.59 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=32.8
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEE-EEeCCe--EEEEEeecCCCccccccccccccceeeEEEEEeCCcceee
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGF-IVLDGE--LYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWR 397 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~-~~~~~~--lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 397 (421)
+.|+++|..+.+-..--+++. ...++ +..+++ ||+.-+.+ .+|.+||..+++-.
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-----~~~~lavs~D~~~~ly~tn~~~------------------~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-----EIDSINVSQDEKPLLYALSTGD------------------KTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-----EECEEEECSSSSCEEEEEETTT------------------TEEEEEETTTCCEE
T ss_pred CEEEEEECCCCeEEEEEECCC-----CcceEEECCCCCeEEEEEcCCC------------------CeEEEEECCCCcEE
Confidence 579999999866544323322 12233 334554 66655433 37899999888754
Q ss_pred E
Q 014650 398 Y 398 (421)
Q Consensus 398 ~ 398 (421)
.
T Consensus 368 ~ 368 (386)
T 3sjl_D 368 R 368 (386)
T ss_dssp E
T ss_pred E
Confidence 3
No 240
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=53.15 E-value=1.3e+02 Score=27.07 Aligned_cols=86 Identities=5% Similarity=-0.125 Sum_probs=41.9
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
..+.++|+.+.+-......... -.. +.+..++++++.++.+ .+.+++..++.-...........
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~--V~~-v~fspdg~~l~s~s~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGE--VKD-LHFSTDGKVVAYITGS-------------SLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSC--CCE-EEECTTSSEEEEECSS-------------CEEEEETTTCCEEEEECCCCTTE
T ss_pred CEEEEeECCCCcEEEEeCCCCc--eEE-EEEccCCceEEeccce-------------eEEEEEeccCcceeeeecCCCCC
Confidence 4688899888765433221111 112 2332226666666532 36677777766443222211111
Q ss_pred CeeEEEEccCCeEEEEeccCCC
Q 014650 225 GCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 225 ~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
...++.+..+++.++.++.++.
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSS
T ss_pred CEEEEEEcCCCCEEEEEecCCc
Confidence 1223333333777777766543
No 241
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=52.89 E-value=1.2e+02 Score=26.84 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=48.3
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCc---eeeccccCCCccceEEEEE--ccCCEEEEEcCCccccccC
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFS---WERIAPMISPRGSFACAAV--RSLNQIIVAGGGSRHSLFG 194 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~---W~~~~~~~~~r~~~~~~~~--~~~~~iyv~GG~~~~~~~~ 194 (421)
++.||+.--. ...++++++.... +.....+..| .++++- + +.||+.-..
T Consensus 46 ~~~lyw~D~~--------------~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~--g~ly~~d~~------- 99 (318)
T 3sov_A 46 HGLIYWSDVS--------------EEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLG--EKLYWTDSE------- 99 (318)
T ss_dssp GTEEEEEETT--------------TTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTT--TEEEEEETT-------
T ss_pred CCEEEEEECC--------------CCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCC--CeEEEEECC-------
Confidence 5789988532 3578999887653 2111222222 234443 4 899998543
Q ss_pred CCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEc-cCCeEEEEe
Q 014650 195 AAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAE-ESGEFWVMG 241 (421)
Q Consensus 195 ~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~-~~~~iyv~G 241 (421)
...++++++....-+.+ ..+..| .++++. .++.||+.-
T Consensus 100 -----~~~I~~~~~dG~~~~~l~~~~~~~P----~giavdp~~g~ly~td 140 (318)
T 3sov_A 100 -----TNRIEVSNLDGSLRKVLFWQELDQP----RAIALDPSSGFMYWTD 140 (318)
T ss_dssp -----TTEEEEEETTSCSCEEEECSSCSSE----EEEEEEGGGTEEEEEE
T ss_pred -----CCEEEEEECCCCcEEEEEeCCCCCc----cEEEEeCCCCEEEEEe
Confidence 24588888876543333 233333 344443 237888875
No 242
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=52.36 E-value=1.2e+02 Score=26.66 Aligned_cols=80 Identities=8% Similarity=0.122 Sum_probs=41.0
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCC----CceEEC-C-C
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAK----NEWVSM-D-E 218 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t----~~W~~~-~-~ 218 (421)
+.+.++|+.+.....+-+ ....-++++....+++||+.... ...+.++++.. ..-+.+ . .
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~------------~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT------------TTEEEEEEC--------CEEEECSS
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC------------CCcEEEEECCCCCCCcccEEEEeCC
Confidence 357888888776654421 22223344443212789998653 23588888876 222222 1 2
Q ss_pred CCCCCCCeeEEEEc-cCCeEEEEec
Q 014650 219 MPRFRAGCVGFVAE-ESGEFWVMGG 242 (421)
Q Consensus 219 ~~~~r~~~~~~~~~-~~~~iyv~GG 242 (421)
+..| .++++. .++.||+.-.
T Consensus 76 ~~~p----~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 76 IQAP----DGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp CSCC----CEEEEETTTTEEEEEET
T ss_pred CCCc----CEEEEeecCCeEEEEEC
Confidence 2222 244443 2388999854
No 243
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=51.93 E-value=1.9e+02 Score=28.73 Aligned_cols=68 Identities=10% Similarity=0.014 Sum_probs=36.2
Q ss_pred cCCceEEEeCCCCCCCccEEEeCCCC---cEEECCCCCCCCCCCCCcceEEE-EeCCEEEEEcccccCCCCCCCCCCCCC
Q 014650 69 SQSDLLCIFPQDPSISSPFLFDAANR---ACRPLPPLPCNPSTYSLCNFTSI-SLGPYIYLLGGSHFDARSFPLDRPLPS 144 (421)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~d~~~~---~W~~l~~l~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~ 144 (421)
...+.+++... ..++.+|..++ +-..+..... ....++ +-+++.++++..
T Consensus 118 pDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~-------~~~~~~~SPDG~~la~~~~--------------- 171 (741)
T 2ecf_A 118 PDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEG-------FATDAKLSPKGGFVSFIRG--------------- 171 (741)
T ss_dssp TTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSS-------CEEEEEECTTSSEEEEEET---------------
T ss_pred CCCCEEEEEeC----CcEEEEECCCCCcceEEEcccCCc-------ccccccCCCCCCEEEEEeC---------------
Confidence 34444444433 56889998876 4444332211 111222 225554445431
Q ss_pred CeEEEEeCccCceeeccc
Q 014650 145 DSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~ 162 (421)
..++++|..+.+..++..
T Consensus 172 ~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEETTTTEEEECCC
T ss_pred CcEEEEecCCCCEEEecc
Confidence 268999998877666543
No 244
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=51.16 E-value=1.1e+02 Score=25.68 Aligned_cols=15 Identities=7% Similarity=0.133 Sum_probs=11.6
Q ss_pred EEEEeCCEEEEEccc
Q 014650 115 TSISLGPYIYLLGGS 129 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~ 129 (421)
+++...+.+|+|-|.
T Consensus 35 Ai~~~~g~~~fFkg~ 49 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR 49 (218)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEeCCCcEEEEECC
Confidence 455678999999884
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=51.00 E-value=1.3e+02 Score=26.40 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=12.0
Q ss_pred CceEEEeCCCCceeEe
Q 014650 321 FDILRYDMGLNRWLKE 336 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~ 336 (421)
..+++||+.+.+.+.+
T Consensus 165 g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCCEEEEe
Confidence 4588999988776654
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=50.70 E-value=88 Score=31.33 Aligned_cols=64 Identities=17% Similarity=0.226 Sum_probs=33.1
Q ss_pred CceEEEeCCCC--ceeEecccCCCCCCCCceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcce--e
Q 014650 321 FDILRYDMGLN--RWLKETTIPEIRPCKKPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKT--W 396 (421)
Q Consensus 321 ~~v~~yd~~~~--~W~~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~--W 396 (421)
..+..+|..+. .|+.-..-+... .....+.++.++.||+..+.... .....|+.||+++++ |
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~~~v~vg~~~~~~-------------~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKP-YSITGAPRVVKGKVIIGNGGAEY-------------GVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSS-CBCCSCCEEETTEEEECCBCTTT-------------CCBCEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCc-ceecCCCEEECCEEEEeCCCCCc-------------CCCCEEEEEECCCCcEEE
Confidence 45777777655 477643211100 11223345678888774332110 011368999988764 7
Q ss_pred eE
Q 014650 397 RY 398 (421)
Q Consensus 397 ~~ 398 (421)
+.
T Consensus 193 ~~ 194 (668)
T 1kv9_A 193 RF 194 (668)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 247
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=48.66 E-value=1.8e+02 Score=27.56 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=28.6
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEccCCeEEEEecc
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
+++|++-|.. .++||..+++...- +.++. ..++.... +++|+|-|.
T Consensus 159 ~~~yfFkG~~--------------yw~yd~~~~~~~~~~w~gi~~----iDAA~~~~-g~~YfFkG~ 206 (460)
T 1qhu_A 159 EGILFFQGNR--------------KWFWDLTTGTKKERSWPAVGN----CTSALRWL-GRYYCFQGN 206 (460)
T ss_dssp SEEEEEETTE--------------EEEEETTTTEEEEECCTTSCC----CSEEEEET-TEEEEEETT
T ss_pred CeEEEEeccc--------------EEEEecccceeecccCCCCCc----cchheeeC-CceEEEECC
Confidence 7888887742 68888887654321 22222 23444444 899999885
No 248
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=48.34 E-value=1.8e+02 Score=27.27 Aligned_cols=119 Identities=17% Similarity=0.273 Sum_probs=0.0
Q ss_pred EEEEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCC-ccceEEEEEccCCEEEEEcCCcccccc
Q 014650 115 TSISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISP-RGSFACAAVRSLNQIIVAGGGSRHSLF 193 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~ 193 (421)
++-.+++.||++--.....+ .-+.+.+.+..-..|..+.-...- ....-.+.++ +.||++|.......+
T Consensus 343 CvkyYdgvLyLtTRgt~~~~--------~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvg--D~l~mFgsERA~nEW 412 (670)
T 3ju4_A 343 CIKYYDGVLYLITRGTRGDR--------LGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVG--DDLIMFGSERAENEW 412 (670)
T ss_dssp EEEEETTEEEEEEEESCTTS--------CCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEET--TEEEEEEECSSTTCS
T ss_pred hhhhhCCEEEEEecCcCCCC--------CcceeeeecccCCchhheeccccccccCCCcceeC--CEEEEEecccccccc
Q ss_pred CCCCCccc-------------eEEEEECCCCceEEC------CCCCCCCCCeeEEEEccCCeE-EEEeccC
Q 014650 194 GAAGSRIS-------------SVERYDVAKNEWVSM------DEMPRFRAGCVGFVAEESGEF-WVMGGYG 244 (421)
Q Consensus 194 ~~~~~~~~-------------~~~~yd~~t~~W~~~------~~~~~~r~~~~~~~~~~~~~i-yv~GG~~ 244 (421)
..+..... .+.-+..+.-+|..+ +..-..-.+..++++.+ +-| |+|||.+
T Consensus 413 E~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD-~~lyyiFGgEd 482 (670)
T 3ju4_A 413 EAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKD-NYIYYMFGGED 482 (670)
T ss_dssp STTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEET-TEEEEEEEEBC
T ss_pred ccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeC-CEEEEEecCcc
No 249
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=47.51 E-value=1.7e+02 Score=26.88 Aligned_cols=81 Identities=7% Similarity=0.115 Sum_probs=41.2
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC----ceEE-CC-C
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN----EWVS-MD-E 218 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~----~W~~-~~-~ 218 (421)
..+.+.|+....+..+.+ ....-.+++....++.||+..-. ...+.++++... ..+. +. .
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~------------~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------------QRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT------------TTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC------------CCeEEEEEcccCCCCCcceEEEeCC
Confidence 457777777766655432 22223344443112899998553 234777887652 2222 22 2
Q ss_pred CCCCCCCeeEEEEcc-CCeEEEEecc
Q 014650 219 MPRFRAGCVGFVAEE-SGEFWVMGGY 243 (421)
Q Consensus 219 ~~~~r~~~~~~~~~~-~~~iyv~GG~ 243 (421)
+. ...++++.- .+.||+.-..
T Consensus 158 ~~----~p~glavD~~~~~lY~~d~~ 179 (400)
T 3p5b_L 158 IQ----APDGLAVDWIHSNIYWTDSV 179 (400)
T ss_dssp CS----CEEEEEEETTTTEEEEEETT
T ss_pred CC----CcccEEEEecCCceEEEECC
Confidence 22 223455541 3889998643
No 250
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=46.91 E-value=2.5e+02 Score=28.71 Aligned_cols=39 Identities=18% Similarity=0.115 Sum_probs=21.2
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceEEEEe--CCeEEEEEe
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLGFIVL--DGELYVMTV 363 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG 363 (421)
..|++.++....-+.+..-. .....++++- +++||+.-.
T Consensus 537 ~~I~~~~~dG~~~~~lv~~~----l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTEN----IQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp CEEEEEETTSCCEEEEECSS----CSCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEecCCCceEEEEeCC----CCCceEEEEecCCCeEEEEeC
Confidence 45778887765444442211 1123344443 688998863
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=43.94 E-value=2e+02 Score=26.71 Aligned_cols=50 Identities=8% Similarity=0.054 Sum_probs=30.9
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeEEEEccCC-eEEEEeccC
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESG-EFWVMGGYG 244 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~-~iyv~GG~~ 244 (421)
+.||++-- . ..+.++|+++++.+.+.. . -....++++..++ .||+....+
T Consensus 150 g~Lyv~d~----------~---~~I~~id~~~~~v~~~~~-~--~~~P~~ia~d~~G~~lyvad~~~ 200 (430)
T 3tc9_A 150 NHLYLVGE----------Q---HPTRLIDFEKEYVSTVYS-G--LSKVRTICWTHEADSMIITNDQN 200 (430)
T ss_dssp EEEEEEEB----------T---EEEEEEETTTTEEEEEEC-C--CSCEEEEEECTTSSEEEEEECCS
T ss_pred CeEEEEeC----------C---CcEEEEECCCCEEEEEec-C--CCCcceEEEeCCCCEEEEEeCCC
Confidence 78998843 1 568899999988776543 1 1123344444334 499987543
No 252
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=42.87 E-value=2.6e+02 Score=27.63 Aligned_cols=43 Identities=12% Similarity=0.150 Sum_probs=23.2
Q ss_pred eEEEEECCCCceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 202 SVERYDVAKNEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 202 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
.+.+||..+.+-...- ........++.+..++++.+.|+.++.
T Consensus 542 ~v~vwd~~~~~~~~~~--~~h~~~v~~v~~spdg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTL--AGHTGYVSTVAVSPDGSLCASGGKDGV 584 (694)
T ss_dssp CEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred eEEEEECCCCcEEEEE--cCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 4788898876543221 111112234444433778888877654
No 253
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=41.76 E-value=2.4e+02 Score=27.01 Aligned_cols=56 Identities=5% Similarity=-0.111 Sum_probs=33.8
Q ss_pred CceEEEeCCCCceeEecccCCCCCCCCceE-EEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceee
Q 014650 321 FDILRYDMGLNRWLKETTIPEIRPCKKPLG-FIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWR 397 (421)
Q Consensus 321 ~~v~~yd~~~~~W~~~~~~~~~~~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 397 (421)
..|+++|..+.+++.+..-.. .... ...-+|+.++.+..++. ..|++||.++++.+
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~-----~~~~~~~SpDG~~l~~~~~~~~----------------~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEG-----SFSSASISPGMKVTAGLETARE----------------ARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSC-----EEEEEEECTTSCEEEEEECSSC----------------EEEEEECTTTCCEE
T ss_pred eEEEEEcCCCCCceEeecCCC-----ccccceECCCCCEEEEccCCCe----------------eEEEEEcCCCCcEE
Confidence 358899999988887643221 1112 22335665554433321 47899999988876
No 254
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=40.77 E-value=2.4e+02 Score=26.64 Aligned_cols=15 Identities=0% Similarity=0.067 Sum_probs=11.9
Q ss_pred EEEEeCCEEEEEccc
Q 014650 115 TSISLGPYIYLLGGS 129 (421)
Q Consensus 115 ~~~~~~~~iyv~GG~ 129 (421)
+++.+++.+|+|-|.
T Consensus 267 Ai~~~~ge~y~Fkg~ 281 (450)
T 1su3_A 267 AITTIRGEVMFFKDR 281 (450)
T ss_dssp EEEEETTEEEEEETT
T ss_pred eEEecCCeEEEEeCC
Confidence 455678999999884
No 255
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=39.15 E-value=2.1e+02 Score=25.42 Aligned_cols=62 Identities=11% Similarity=0.024 Sum_probs=34.7
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP 220 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~ 220 (421)
..+|++|..+.+-+++...+..........-+ ...|+..... ..++++|..+.+-..+...+
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spd-g~~l~~~~~~-------------~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPD-DDALFYVKDG-------------RNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSSCEECTT-SSEEEEEETT-------------TEEEEEETTTCCEEEEEECC
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccceEEcCC-CCEEEEEeCC-------------CeEEEEECCCCcceeeeech
Confidence 47999999998877776544322211111112 0345544431 25788898887755544433
No 256
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=38.36 E-value=3.3e+02 Score=27.59 Aligned_cols=157 Identities=13% Similarity=0.140 Sum_probs=0.0
Q ss_pred CceeeccccC----CCccceEEEEEccCCEEEEEc---CCccccccCCCCCccceEEEEECCCCceEECCCCCC------
Q 014650 155 FSWERIAPMI----SPRGSFACAAVRSLNQIIVAG---GGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPR------ 221 (421)
Q Consensus 155 ~~W~~~~~~~----~~r~~~~~~~~~~~~~iyv~G---G~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~------ 221 (421)
++|++++..+ .......++...+...+|+.+ +.. +++=.-.-.+|+.+..++.
T Consensus 529 ~tW~~~~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~~~~~--------------v~~S~D~G~tW~~~~~l~~~~~~i~ 594 (763)
T 3a0f_A 529 DSWTLFQTCVPSLEVGNGGTIAVGADGKTFVWSPSKADGKG--------------PYTSSDYGKTWTAPSGLSKQTTGIA 594 (763)
T ss_dssp SSCEECSSCCTTCBTTBCCEEEECTTSSCEEEECSSCCSSC--------------CEEESSTTSCCBCCBSCCCCCSCEE
T ss_pred cCCccCCCCCcccccCCcceEEEecCCCcEEEEecccCCCc--------------eEEeCCCCCCCeecCCCCCCcceEE
Q ss_pred --CCCCeeEEEEccCCeEEEE--eccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEe-cCcc-----
Q 014650 222 --FRAGCVGFVAEESGEFWVM--GGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREV-GDMW----- 291 (421)
Q Consensus 222 --~r~~~~~~~~~~~~~iyv~--GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~-~~~~----- 291 (421)
+.......+..+ +.||+. ||. +|+.+ ..++
T Consensus 595 ~d~~~~~~~y~g~~-g~v~~S~DgG~---------------------------------------tW~~~~~~lp~~~~~ 634 (763)
T 3a0f_A 595 ADRVQANTFYVYVE-GDFFVSTDGGK---------------------------------------SYTKKGNGLPCCWTY 634 (763)
T ss_dssp ECSSSTTCEEEEET-TEEEEESSTTS---------------------------------------BCEEECBTSCCSSCC
T ss_pred EeccCCCEEEEEcC-CCEEEEeCCCc---------------------------------------CccccccCCCcccCc
Q ss_pred ---ccccccccCeEEEEccccCCCceEEEecCCceEEEeCCCCceeEecccCCCCCCCC----ceEEEEeCC---eEEEE
Q 014650 292 ---DEWERSRIGKIVVMEDENRGRPEVFMLDKFDILRYDMGLNRWLKETTIPEIRPCKK----PLGFIVLDG---ELYVM 361 (421)
Q Consensus 292 ---~~~~~~~~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~r~----~~~~~~~~~---~lyv~ 361 (421)
........+.+|+.++. ..|++-+-.-.+|+++..++. ... .++.+..+. .||++
T Consensus 635 ~~~i~~~~~~~~~l~~~~~~------------~~l~~S~D~G~tW~~~~~~~~---~~~~~~~~~g~~~~~~~~~~l~~~ 699 (763)
T 3a0f_A 635 TGTPVTSNLRAGELWVSVKG------------VGIYHSTDFGNTFTALAGSGS---SLNPAVFSIGAPQTPNATETLFLW 699 (763)
T ss_dssp CEEEEECSSSTTCEEEEETT------------TEEEEESSTTSBCEECTTBTT---TBEEEEEEEECCSSTTSSCEEEEE
T ss_pred cccEEECCCCCCcEEEEcCC------------CeEEEEcCCCCCceEccCCCc---ccccceeEEeeecCCCCCceEEEE
Q ss_pred E-----eecCCCccccccccccccceeeEEEEEeCCcceeeEe
Q 014650 362 T-----VLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYI 399 (421)
Q Consensus 362 G-----G~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i 399 (421)
| +.. .|++=+-.-.+|+++
T Consensus 700 G~~~~~~~~-------------------gl~~S~D~G~tW~~~ 723 (763)
T 3a0f_A 700 GIPSASQPE-------------------GLYMSTDNGGLWTRL 723 (763)
T ss_dssp EECSTTSCS-------------------EEEEESSTTSCCEEC
T ss_pred EEcccCCCc-------------------EEEEeCCCCCCcEec
No 257
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=37.48 E-value=1.4e+02 Score=24.38 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=54.4
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcE-EECCC--CCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCeE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRAC-RPLPP--LPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDSA 147 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W-~~l~~--l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v 147 (421)
++.+|+|.|+ ..|.|+..+-.- +.+.. +|.. ......+....++++|+|-|. ..
T Consensus 64 ~~~~yfFkG~----~yw~~~~~~~~~Pk~i~~~G~p~~---~~~iDAA~~~~~g~~yfFkg~----------------~y 120 (195)
T 1itv_A 64 SKKLFFFSGR----QVWVYTGASVLGPRRLDKLGLGAD---VAQVTGALRSGRGKMLLFSGR----------------RL 120 (195)
T ss_dssp TCCEEEEETT----EEEEEETTEEEEEEEGGGGTCCTT---CCCCCEEEECSTTEEEEEETT----------------EE
T ss_pred CCeEEEEeCC----EEEEEcCCccCCCEEeeecccCCC---ccceeEEEEcCCCeEEEEeCC----------------EE
Confidence 4567777763 367777542110 11111 2210 112333443336899999873 58
Q ss_pred EEEeCccCceee-----cc-ccC-CCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 148 FRFNFLTFSWER-----IA-PMI-SPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 148 ~~yd~~t~~W~~-----~~-~~~-~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
|+||..+++-.. +. ..+ .|..-.++...+ +.+|++-|.. .+.||..+..
T Consensus 121 wr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~--g~~Yffkg~~--------------y~~~~~~~~~ 176 (195)
T 1itv_A 121 WRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFR--EKAYFCQDRF--------------YWRVSSRSEL 176 (195)
T ss_dssp EEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEEET--TEEEEEETTE--------------EEEEECCTTC
T ss_pred EEEeCCcccccCCCccChhhcCCCCCCCCCEEEEeC--CeEEEEeCCE--------------EEEEECCccE
Confidence 999987754221 11 011 111223444456 8999998853 6677776654
No 258
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=36.27 E-value=3.3e+02 Score=26.91 Aligned_cols=119 Identities=11% Similarity=-0.016 Sum_probs=65.5
Q ss_pred ccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 85 SPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 85 ~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
++...|..+..-..+.+++.- ....+++.. ++.||+.--. ...++++++.....+.+..
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~-----~~~~~l~~d~~~~~lywtD~~--------------~~~I~r~~~~g~~~~~v~~ 76 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGV-----KEASALDFDVTDNRIYWTDIS--------------LKTISRAFMNGSALEHVVE 76 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSC-----SCEEEEEEETTTTEEEEEETT--------------TTEEEEEETTSCSCEEEEC
T ss_pred cEEEEECCCCCcceEEEcCCC-----CceEEEEEECCCCEEEEEECC--------------CCeEEEEECCCCCcEEEEe
Confidence 466777766543333233211 223444443 6899988542 3578899887665554432
Q ss_pred cCCCccceEEEE--EccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC--CCCCCCCCCeeEEEEc-cCCeE
Q 014650 163 MISPRGSFACAA--VRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM--DEMPRFRAGCVGFVAE-ESGEF 237 (421)
Q Consensus 163 ~~~~r~~~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~-~~~~i 237 (421)
... ..-.++++ .+ ++||+.-.. ...++++++....=+.+ ..+..|+ ++++. ..+.|
T Consensus 77 ~g~-~~P~GlAvD~~~--~~LY~tD~~------------~~~I~v~~~dG~~~~~l~~~~l~~P~----~iavdp~~G~l 137 (628)
T 4a0p_A 77 FGL-DYPEGMAVDWLG--KNLYWADTG------------TNRIEVSKLDGQHRQVLVWKDLDSPR----ALALDPAEGFM 137 (628)
T ss_dssp SSC-SCCCEEEEETTT--TEEEEEETT------------TTEEEEEETTSTTCEEEECSSCCCEE----EEEEETTTTEE
T ss_pred CCC-CCcceEEEEeCC--CEEEEEECC------------CCEEEEEecCCCcEEEEEeCCCCCcc----cEEEccCCCeE
Confidence 211 11224444 34 899998543 24688888876543232 3333343 55554 24889
Q ss_pred EEEe
Q 014650 238 WVMG 241 (421)
Q Consensus 238 yv~G 241 (421)
|+.-
T Consensus 138 Y~tD 141 (628)
T 4a0p_A 138 YWTE 141 (628)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9875
No 259
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=35.18 E-value=3.5e+02 Score=26.86 Aligned_cols=167 Identities=10% Similarity=0.018 Sum_probs=0.0
Q ss_pred cccCCceEEEeCCCCC--CCccEEEeCCC------C--cEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCC
Q 014650 67 FNSQSDLLCIFPQDPS--ISSPFLFDAAN------R--ACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSF 136 (421)
Q Consensus 67 ~~~~~~~~~~~g~~~~--~~~~~~~d~~~------~--~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 136 (421)
.....+++++...... .++++.+|..+ . .+..+..-... ........++.||+.+..+...
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~~~~--- 310 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG------EYDYVTNEGTVFTFKTNRHSPN--- 310 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS------CEEEEEEETTEEEEEECTTCTT---
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc------EEEEEeccCCEEEEEECCCCCC---
Q ss_pred CCCCCCCCCeEEEEeCccC---ceeeccccCCCccceEEEEE-ccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc
Q 014650 137 PLDRPLPSDSAFRFNFLTF---SWERIAPMISPRGSFACAAV-RSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 137 ~~~~~~~~~~v~~yd~~t~---~W~~~~~~~~~r~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
..++.+|..+. .|+.+.+-.....-..++.. + +.+++.... .....++++|..+++
T Consensus 311 --------~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~lv~~~~~----------~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 311 --------YRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRS--NFLVLCYLH----------DVKNTLQLHDLATGA 370 (710)
T ss_dssp --------CEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETT--TEEEEEEEE----------TTEEEEEEEETTTCC
T ss_pred --------CEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcC--CEEEEEEEE----------CCEEEEEEEECCCCC
Q ss_pred eEECCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCC--ceEe
Q 014650 213 WVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGT--WREV 287 (421)
Q Consensus 213 W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~--W~~~ 287 (421)
-...-..+.......+..-.++.-+|.+.+...... ++.||..++ + .+.+
T Consensus 371 ~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-------------i~~~d~~tg------------~~~~~~l 422 (710)
T 2xdw_A 371 LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI-------------IYHCDLTKE------------ELEPRVF 422 (710)
T ss_dssp EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCE-------------EEEEETTSS------------SCCCEEE
T ss_pred EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCE-------------EEEEECCCC------------ccceEEe
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=34.84 E-value=1.4e+02 Score=29.43 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=43.8
Q ss_pred CeEEEEeCccCc--eeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCc--eEECCCCC
Q 014650 145 DSAFRFNFLTFS--WERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNE--WVSMDEMP 220 (421)
Q Consensus 145 ~~v~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~ 220 (421)
..+..+|+.|.+ |+.-... +.....+++.+ +.+|+ |..+ ..+..||.++.+ |+. .++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tag--g~vf~-gt~d------------g~l~A~D~~tG~~lW~~--~l~ 513 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAG--DLVFY-GTLD------------GYLKARDSDTGDLLWKF--KIP 513 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETT--TEEEE-ECTT------------SEEEEEETTTCCEEEEE--ECS
T ss_pred CeEEEEECCCCCEEeEecCCC--CccCcceEecC--CEEEE-ECCC------------CeEEEEECCCCCEEEEe--eCC
Confidence 568889998876 8764332 22222344456 77777 4432 248899999987 875 233
Q ss_pred CCCCCeeEEEEccCCeEEEE
Q 014650 221 RFRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 221 ~~r~~~~~~~~~~~~~iyv~ 240 (421)
........+...+ +++||.
T Consensus 514 ~g~~~~P~~y~~~-G~qyv~ 532 (599)
T 1w6s_A 514 SGAIGYPMTYTHK-GTQYVA 532 (599)
T ss_dssp SCCCSCCEEEEET-TEEEEE
T ss_pred CCcEeccEEEEeC-CEEEEE
Confidence 2222222222234 888876
No 261
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=34.65 E-value=1.9e+02 Score=23.67 Aligned_cols=92 Identities=11% Similarity=0.106 Sum_probs=47.9
Q ss_pred eCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCce---eeccc----cCCCccceEEEEEccCCEEEEEcCCcccc
Q 014650 119 LGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSW---ERIAP----MISPRGSFACAAVRSLNQIIVAGGGSRHS 191 (421)
Q Consensus 119 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W---~~~~~----~~~~r~~~~~~~~~~~~~iyv~GG~~~~~ 191 (421)
.++++|+|-|. .+|+|+..+... +.+.. +|..... ++.....++++|++-|..
T Consensus 60 ~~g~~yfFkg~----------------~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG~~--- 119 (196)
T 3c7x_A 60 KDGKFVFFKGD----------------KHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRGNK--- 119 (196)
T ss_dssp TTSCEEEEETT----------------EEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEETTE---
T ss_pred CCCcEEEecCC----------------EEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEECCE---
Confidence 47889999883 588998643221 12222 3322222 222222128999997742
Q ss_pred ccCCCCCccceEEEEECCCCceEE-----CC---CCCCCCCCeeEEEEccCCeEEEEecc
Q 014650 192 LFGAAGSRISSVERYDVAKNEWVS-----MD---EMPRFRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 192 ~~~~~~~~~~~~~~yd~~t~~W~~-----~~---~~~~~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
.++||..+++-.. +. .+|. .-.+++...+++++|++-|.
T Consensus 120 -----------yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg~ 166 (196)
T 3c7x_A 120 -----------YYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKGN 166 (196)
T ss_dssp -----------EEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEETT
T ss_pred -----------EEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEECC
Confidence 6788877653211 11 1221 11233444342499999774
No 262
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=33.92 E-value=2.1e+02 Score=23.95 Aligned_cols=22 Identities=18% Similarity=0.286 Sum_probs=16.5
Q ss_pred EEeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCcc
Q 014650 117 ISLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLT 154 (421)
Q Consensus 117 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t 154 (421)
...++++|+|-|. .+|+|+..+
T Consensus 69 ~~~~~~~yfFkG~----------------~yw~~~~~~ 90 (219)
T 1hxn_A 69 FSWEDKLYLIQDT----------------KVYVFLTKG 90 (219)
T ss_dssp EEETTEEEEEETT----------------EEEEEECSS
T ss_pred EEECCcEEEecCC----------------EEEEEeCCC
Confidence 3448999999873 589998653
No 263
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=32.89 E-value=2e+02 Score=23.84 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=36.5
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceee-----c----cccCCCccceEEEEEccCCEEEEEcCCccc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWER-----I----APMISPRGSFACAAVRSLNQIIVAGGGSRH 190 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~-----~----~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 190 (421)
++++|+|-|. ..|+||..+++-.. + +.+|. .. -++...+ +++|++-|..
T Consensus 127 ~gk~yfFkG~----------------~ywr~d~~~~~~d~gyPr~i~~~~~Gip~-~i-DaAf~~~--g~~YfFkg~~-- 184 (207)
T 1pex_A 127 TGKTLLFSGN----------------QVWRYDDTNHIMDKDYPRLIEEDFPGIGD-KV-DAVYEKN--GYIYFFNGPI-- 184 (207)
T ss_dssp TSEEEEEETT----------------EEEEEETTTTEECSSCCCBHHHHSTTSCS-CC-SEEEEET--TEEEEEETTE--
T ss_pred CCEEEEEeCC----------------EEEEEeCcCccccCCCCccHHHcCCCCCC-Cc-cEEEEcC--CcEEEEECCE--
Confidence 4899999883 68999987643221 1 11221 22 2333345 9999998753
Q ss_pred cccCCCCCccceEEEEECCCCc
Q 014650 191 SLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 191 ~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
.++||..+++
T Consensus 185 ------------y~rf~~~~~~ 194 (207)
T 1pex_A 185 ------------QFEYSIWSNR 194 (207)
T ss_dssp ------------EEEEETTTTE
T ss_pred ------------EEEEeCCccE
Confidence 6778877655
No 264
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=32.56 E-value=3.4e+02 Score=25.95 Aligned_cols=59 Identities=12% Similarity=0.064 Sum_probs=34.5
Q ss_pred EEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCC
Q 014650 147 AFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDE 218 (421)
Q Consensus 147 v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~ 218 (421)
+.+||..+.+-+++...+. ...+. .-+ |+..++++.+. .....++++|..+++++.+..
T Consensus 134 ~~l~d~~~g~~~~l~~~~~--~~~~~-spD--G~~la~~~~~~--------~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG--FGFVS-DIR--GDLIAGLGFFG--------GGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEEEEEETTEEEEEEEESS--CEEEE-EEE--TTEEEEEEEEE--------TTEEEEEEEETTTCCCEEECC
T ss_pred ceEEEccCCcEEEeecCCC--ceEEE-CCC--CCEEEEEEEcC--------CCCeEEEEEcCCCCCceEeec
Confidence 4478988887776654433 22222 223 55555444321 112458999999999887644
No 265
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=30.36 E-value=2.6e+02 Score=23.99 Aligned_cols=84 Identities=8% Similarity=0.115 Sum_probs=42.3
Q ss_pred CeEEEEeCccCc----eeeccccCCCccceEEEEEccCCE-EEEEcCCccccccCCCCCccceEEEEEC-CCCceEECCC
Q 014650 145 DSAFRFNFLTFS----WERIAPMISPRGSFACAAVRSLNQ-IIVAGGGSRHSLFGAAGSRISSVERYDV-AKNEWVSMDE 218 (421)
Q Consensus 145 ~~v~~yd~~t~~----W~~~~~~~~~r~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~yd~-~t~~W~~~~~ 218 (421)
..+.+||..+.. -..... ....-.+++...+ +. .++.|+.+ ..+.+||. .+..-..+..
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~-~~~~l~~~~~d------------g~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDN-TDLQIYVGTVQ------------GEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEES-SSEEEEEEETT------------SCEEEECSSSSSSEEECBS
T ss_pred CeEEEEEeCCCCccccceeeee--cCCceEEEEECCC-CCcEEEEEcCC------------CeEEEEEeccCCceEeccc
Confidence 467888877665 322221 1111223333322 66 66666653 24888999 8877655543
Q ss_pred CCCCCCCeeEEEEccCCeEEEEeccCC
Q 014650 219 MPRFRAGCVGFVAEESGEFWVMGGYGD 245 (421)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~iyv~GG~~~ 245 (421)
.... ....++.+.. +.+++.|+.++
T Consensus 98 ~~~~-~~v~~l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 98 NEAN-LGICRICKYG-DDKLIAASWDG 122 (342)
T ss_dssp CCCC-SCEEEEEEET-TTEEEEEETTS
T ss_pred cCCC-CceEEEEeCC-CCEEEEEcCCC
Confidence 1111 1223334433 45666666554
No 266
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=30.08 E-value=1e+02 Score=25.99 Aligned_cols=17 Identities=12% Similarity=0.360 Sum_probs=10.8
Q ss_pred eEEEEccCCeEEEEecc
Q 014650 227 VGFVAEESGEFWVMGGY 243 (421)
Q Consensus 227 ~~~~~~~~~~iyv~GG~ 243 (421)
++.....++++|+|-|.
T Consensus 122 AA~~~~~~~k~yfFkG~ 138 (227)
T 3lp9_A 122 AAYRSTRGKEVYLFKGD 138 (227)
T ss_dssp EEEECSSTTEEEEEETT
T ss_pred EEEEECCCCEEEEEECC
Confidence 33443334899999874
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=29.45 E-value=3.4e+02 Score=25.08 Aligned_cols=135 Identities=9% Similarity=0.003 Sum_probs=68.4
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
+..+|+.-.. ..+..+|+..++...+.... .+ -..++.. ++.||+...... .....+.
T Consensus 149 ~g~Lyv~d~~---~~I~~id~~~~~v~~~~~~~------~~-P~~ia~d~~G~~lyvad~~~~----------~~~~~v~ 208 (430)
T 3tc9_A 149 HNHLYLVGEQ---HPTRLIDFEKEYVSTVYSGL------SK-VRTICWTHEADSMIITNDQNN----------NDRPNNY 208 (430)
T ss_dssp EEEEEEEEBT---EEEEEEETTTTEEEEEECCC------SC-EEEEEECTTSSEEEEEECCSC----------TTSEEEE
T ss_pred CCeEEEEeCC---CcEEEEECCCCEEEEEecCC------CC-cceEEEeCCCCEEEEEeCCCC----------cccceEE
Confidence 3556665432 56889999988877664311 11 2233332 445998875321 1223466
Q ss_pred EEeCccCcee---eccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCC
Q 014650 149 RFNFLTFSWE---RIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAG 225 (421)
Q Consensus 149 ~yd~~t~~W~---~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 225 (421)
.++... .|. .++.+.. -+.+++..+++.||+..-. ...+.+|++.+..-..+...+.. ..
T Consensus 209 ~~~~~g-~~~~~~~l~~~~~---p~giavdp~~g~lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~-~~ 271 (430)
T 3tc9_A 209 ILTRES-GFKVITELTKGQN---CNGAETHPINGELYFNSWN------------AGQVFRYDFTTQETTPLFTIQDS-GW 271 (430)
T ss_dssp EEEGGG-TSCSEEEEEECSS---CCCEEECTTTCCEEEEETT------------TTEEEEEETTTTEEEEEEECSSS-SC
T ss_pred EEeCCC-ceeeeeeeccCCC---ceEEEEeCCCCEEEEEECC------------CCEEEEEECCCCcEEEEEEcCCC-Cc
Confidence 666543 343 2332222 2344443212889988542 23589999987754333222111 11
Q ss_pred eeEEEEccCCe-EEEEec
Q 014650 226 CVGFVAEESGE-FWVMGG 242 (421)
Q Consensus 226 ~~~~~~~~~~~-iyv~GG 242 (421)
..++++..+++ ||+.--
T Consensus 272 P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 272 EFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp CEEEEECTTSSEEEEEET
T ss_pred ceeEEEcCCCCEEEEEEC
Confidence 22344433244 888753
No 268
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=29.43 E-value=3.5e+02 Score=25.19 Aligned_cols=78 Identities=17% Similarity=-0.009 Sum_probs=42.1
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
.+++||.-....+ ..+.+.++|+.|++=. ..++.+..- .+++-.+...+||.-..... ...+..
T Consensus 84 ~~~vyV~n~~~~~----------~~~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~---~~~G~~ 147 (426)
T 3c75_H 84 ARRVYIQDPAHFA----------AITQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFER---IARGKR 147 (426)
T ss_dssp TTEEEEEECTTTC----------SSEEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEE---TTEEEE
T ss_pred CCEEEEECCCcCC----------CCCeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccc---cccCCC
Confidence 3578888653110 1168999999887643 333344333 33333222578887421000 000112
Q ss_pred cceEEEEECCCCce
Q 014650 200 ISSVERYDVAKNEW 213 (421)
Q Consensus 200 ~~~~~~yd~~t~~W 213 (421)
.+.+.++|+.+.+=
T Consensus 148 ~~~VsviD~~t~~v 161 (426)
T 3c75_H 148 TDYVEVFDPVTFLP 161 (426)
T ss_dssp EEEEEEECTTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 46799999999874
No 269
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=29.42 E-value=2.5e+02 Score=23.51 Aligned_cols=51 Identities=14% Similarity=0.212 Sum_probs=28.7
Q ss_pred CEEEEEcCCccccccCCCCCccceEEEEECCCCceEE----CC-CCCC------CCCCeeEEEEccCCeEEEEecc
Q 014650 179 NQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVS----MD-EMPR------FRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~----~~-~~~~------~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
+++|++-|.. .++||...++-.. +. ..|. +..-.+++....++++|++-|.
T Consensus 128 gk~yfFkG~~--------------yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 128 KEVYLFKGNK--------------YVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp TEEEEEETTE--------------EEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred CcEEEEeCCe--------------EEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 8999998853 6778866655432 11 1111 2222233333234899999874
No 270
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=28.62 E-value=4.5e+02 Score=26.19 Aligned_cols=167 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred ccCCceEEEeCCCC--CCCccEEEeCCCC--c-EEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCC
Q 014650 68 NSQSDLLCIFPQDP--SISSPFLFDAANR--A-CRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPL 142 (421)
Q Consensus 68 ~~~~~~~~~~g~~~--~~~~~~~~d~~~~--~-W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 142 (421)
....+++++..... ..++++.+|..+. + |..+..-... ....+...++.||+....+...
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~------~~~~~~~dg~~l~~~s~~~~~~--------- 340 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA------QWDFVDGVGDQLWFVSGDGAPL--------- 340 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS------CEEEEEEETTEEEEEECTTCTT---------
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc------eEEEEeccCCEEEEEECCCCCC---------
Q ss_pred CCCeEEEEeCcc--CceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCC
Q 014650 143 PSDSAFRFNFLT--FSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMP 220 (421)
Q Consensus 143 ~~~~v~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~ 220 (421)
..++++|..+ ..|+.+-+-........... + +.+++....++ ...++.++...+.-+.+.-..
T Consensus 341 --~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~--~~lv~~~~~dg----------~~~l~~~~~~g~~~~~l~~~~ 405 (741)
T 1yr2_A 341 --KKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-G--NRLFASYIHDA----------KSQVLAFDLDGKPAGAVSLPG 405 (741)
T ss_dssp --CEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-B--TEEEEEEEETT----------EEEEEEEETTSCEEEECBCSS
T ss_pred --CEEEEEeCCCCccccEEEecCCCCeEEEEEEE-C--CEEEEEEEECC----------EEEEEEEeCCCCceeeccCCC
Q ss_pred CCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCCCCCCceEecC
Q 014650 221 RFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDGDRGTWREVGD 289 (421)
Q Consensus 221 ~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~~~~~W~~~~~ 289 (421)
.......+..-.++.-+|.+.+...... ++.||..++ +.+.+..
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~-------------i~~~d~~tg------------~~~~l~~ 449 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPAT-------------VLALDPATA------------KTTPWEP 449 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEE-------------EEEEETTTT------------EEEECSC
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCE-------------EEEEECCCC------------cEEEEec
No 271
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=28.46 E-value=3e+02 Score=24.04 Aligned_cols=53 Identities=9% Similarity=0.169 Sum_probs=26.5
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN 211 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~ 211 (421)
..+.+||..+.+-.. .+..-...-.++.+..++..++.||.+ ..+.+||....
T Consensus 98 ~~v~lwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~l~s~~~d------------~~i~~wd~~~~ 150 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYK--RFVGHQSEVYSVAFSPDNRQILSAGAE------------REIKLWNILGE 150 (343)
T ss_dssp SEEEEEETTSSCEEE--EEECCCSCEEEEEECSSTTEEEEEETT------------SCEEEEESSSC
T ss_pred CcEEEEECCCCcEEE--EEcCCCCcEEEEEECCCCCEEEEEcCC------------CEEEEEeccCC
Confidence 468889988765322 111111112223332225666666653 23677777643
No 272
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=28.27 E-value=4.4e+02 Score=25.95 Aligned_cols=84 Identities=11% Similarity=0.015 Sum_probs=44.9
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCC
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRA 224 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 224 (421)
.++.+.|..+..-..+-+++.-+.-.++.+...+++||+..-. ...+.++++.....+.+..... .
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~------------~~~I~r~~~~g~~~~~v~~~g~--~ 80 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS------------LKTISRAFMNGSALEHVVEFGL--D 80 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT------------TTEEEEEETTSCSCEEEECSSC--S
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC------------CCeEEEEECCCCCcEEEEeCCC--C
Confidence 3567777766543333333332333444443222899998653 2357888887766555432211 1
Q ss_pred CeeEEEEc-cCCeEEEEec
Q 014650 225 GCVGFVAE-ESGEFWVMGG 242 (421)
Q Consensus 225 ~~~~~~~~-~~~~iyv~GG 242 (421)
...+++++ .+++||+.-.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~ 99 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADT 99 (628)
T ss_dssp CCCEEEEETTTTEEEEEET
T ss_pred CcceEEEEeCCCEEEEEEC
Confidence 22355553 2388999754
No 273
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=28.21 E-value=2.6e+02 Score=23.28 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCce---eeccc--cCCC-ccceEEEEEccCCEEEEEcCCcccccc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSW---ERIAP--MISP-RGSFACAAVRSLNQIIVAGGGSRHSLF 193 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W---~~~~~--~~~~-r~~~~~~~~~~~~~iyv~GG~~~~~~~ 193 (421)
++++|+|-|. .+|+||..+..- +.+.. +|.. ..--++.....++++|++-|..
T Consensus 87 ~~k~yfFkG~----------------~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~~----- 145 (218)
T 1gen_A 87 EEKAVFFAGN----------------EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDK----- 145 (218)
T ss_dssp TTEEEEEETT----------------EEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETTE-----
T ss_pred CCEEEEEeCC----------------EEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECCE-----
Confidence 6899999883 589998532110 11222 1211 1122333332228999997742
Q ss_pred CCCCCccceEEEEECCCCceEE-----C----CCCCCCCCCeeEEEEccCCeEEEEecc
Q 014650 194 GAAGSRISSVERYDVAKNEWVS-----M----DEMPRFRAGCVGFVAEESGEFWVMGGY 243 (421)
Q Consensus 194 ~~~~~~~~~~~~yd~~t~~W~~-----~----~~~~~~r~~~~~~~~~~~~~iyv~GG~ 243 (421)
.++||..+++=.. + +.+| ..-.+++...+++++|+|-|.
T Consensus 146 ---------ywr~d~~~~~v~~gyPr~i~~~w~g~p--~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 146 ---------FWRYNEVKKKMDPGFPKLIADAWNAIP--DNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp ---------EEEEETTTTEECSSCCEEHHHHSSSCC--SSCSEEEECTTTCEEEEEETT
T ss_pred ---------EEEEECccccccCCCCcchhhccCCCC--CCCCEEEEEcCCCcEEEEECC
Confidence 6788877653111 0 1122 112234444434899999774
No 274
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=27.37 E-value=4.6e+02 Score=25.91 Aligned_cols=81 Identities=5% Similarity=-0.016 Sum_probs=45.0
Q ss_pred CeEEEEeCccC--ceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCC---ceEECCCC
Q 014650 145 DSAFRFNFLTF--SWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKN---EWVSMDEM 219 (421)
Q Consensus 145 ~~v~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~---~W~~~~~~ 219 (421)
+.++.+|..+. .|+.+..-..... ......+ +.+|+....+ .....+...|..+. .|+.+.+-
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g--~~l~~~t~~~---------~~~~~l~~~d~~~~~~~~~~~l~~~ 326 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKG--STLYLLTNRD---------APNRRLVTVDAANPGPAHWRDLIPE 326 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEEEEET--TEEEEEECTT---------CTTCEEEEEETTSCCGGGCEEEECC
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEEeccC--CEEEEEECCC---------CCCCEEEEEeCCCCCccccEEEecC
Confidence 57888887665 6776654222221 1233445 8898887643 12456888888764 48875332
Q ss_pred CCCCCCeeEEEEccCCeEEEEe
Q 014650 220 PRFRAGCVGFVAEESGEFWVMG 241 (421)
Q Consensus 220 ~~~r~~~~~~~~~~~~~iyv~G 241 (421)
... .. .+...+ +.|++..
T Consensus 327 ~~~--~~-~~s~~g-~~lv~~~ 344 (693)
T 3iuj_A 327 RQQ--VL-TVHSGS-GYLFAEY 344 (693)
T ss_dssp CSS--CE-EEEEET-TEEEEEE
T ss_pred CCC--EE-EEEEEC-CEEEEEE
Confidence 221 12 444443 5665544
No 275
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=27.18 E-value=4.6e+02 Score=25.84 Aligned_cols=64 Identities=11% Similarity=-0.026 Sum_probs=34.6
Q ss_pred CCeEEEEeCccCceeeccccCC---C-ccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceE
Q 014650 144 SDSAFRFNFLTFSWERIAPMIS---P-RGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWV 214 (421)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~---~-r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~ 214 (421)
...+|+.+.....|+.+.+... . ........+..+++..++.... .+.....+.++|.++++..
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-------~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-------NAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-------TTCSCCEEEEEETTTCCBC
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-------CCCceEEEEEEECCCCCCc
Confidence 3567888877777877754332 1 1112223333225544443221 1222457899999998864
No 276
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=26.08 E-value=2.3e+02 Score=26.85 Aligned_cols=134 Identities=11% Similarity=0.025 Sum_probs=66.5
Q ss_pred CCcccccccc--cccCCceEEEeCCC-----CCCCccEEEeCC--CC---cEEECCCCCCCCCCCCCcce---EE-----
Q 014650 57 SRTLVFDRHK--FNSQSDLLCIFPQD-----PSISSPFLFDAA--NR---ACRPLPPLPCNPSTYSLCNF---TS----- 116 (421)
Q Consensus 57 ~~~~~~~~~~--~~~~~~~~~~~g~~-----~~~~~~~~~d~~--~~---~W~~l~~l~~~~~~~~r~~~---~~----- 116 (421)
+|.|+..... .+..++++|+.... .....+...|.. +. +-....+||......++.+. +.
T Consensus 9 ~~~~y~sp~~a~~~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~ 88 (462)
T 2ece_A 9 DPTFYPSPKMAMKAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPN 88 (462)
T ss_dssp CTTCCSSHHHHHTSCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTT
T ss_pred CCCccCChHHHhcCCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccc
Confidence 5666655443 46778999986542 234445566554 32 22222234431111222222 11
Q ss_pred -E--EeCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccC----ceeecc---cc--CCCc-cceEEEEEccCCEEEE
Q 014650 117 -I--SLGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTF----SWERIA---PM--ISPR-GSFACAAVRSLNQIIV 183 (421)
Q Consensus 117 -~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~----~W~~~~---~~--~~~r-~~~~~~~~~~~~~iyv 183 (421)
. .-..+|||-|.. .+.|+++|..++ +-.+.- .+ +... .-|++...-+ + |||
T Consensus 89 ~~~~~~r~~l~v~~l~--------------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd-G-i~V 152 (462)
T 2ece_A 89 GKPNIERRFLIVPGLR--------------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD-A-IYI 152 (462)
T ss_dssp CCTTCCSCEEEEEBTT--------------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS-C-EEE
T ss_pred cCCCccCCEEEEccCC--------------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC-e-EEE
Confidence 1 225677777663 467999998877 222211 11 1121 2244444442 6 777
Q ss_pred EcCCccccccCCCCCccceEEEEECCCCc
Q 014650 184 AGGGSRHSLFGAAGSRISSVERYDVAKNE 212 (421)
Q Consensus 184 ~GG~~~~~~~~~~~~~~~~~~~yd~~t~~ 212 (421)
..-.+ ..+.....+.++|.+|.+
T Consensus 153 s~~g~------~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 153 SALGN------EEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEE------TTSCSCCEEEEECTTTCC
T ss_pred EcCCC------cCCCCCCeEEEEECCCCe
Confidence 43211 112335679999999875
No 277
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=25.72 E-value=2.9e+02 Score=23.04 Aligned_cols=138 Identities=6% Similarity=-0.167 Sum_probs=68.6
Q ss_pred CceEEEeCCCCCCCccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe--CCEEEEEcccccCCCCCCCCCCCCCCeEE
Q 014650 71 SDLLCIFPQDPSISSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL--GPYIYLLGGSHFDARSFPLDRPLPSDSAF 148 (421)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~v~ 148 (421)
++.+|+... ....+..||+....-..+..-. . ..-+.++.. ++.||+.-.. ...+.
T Consensus 47 ~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~-----~-~~p~~ia~d~~~~~lyv~d~~--------------~~~I~ 104 (267)
T 1npe_A 47 DKVVYWTDI--SEPSIGRASLHGGEPTTIIRQD-----L-GSPEGIALDHLGRTIFWTDSQ--------------LDRIE 104 (267)
T ss_dssp TTEEEEEET--TTTEEEEEESSSCCCEEEECTT-----C-CCEEEEEEETTTTEEEEEETT--------------TTEEE
T ss_pred CCEEEEEEC--CCCEEEEEecCCCCcEEEEECC-----C-CCccEEEEEecCCeEEEEECC--------------CCEEE
Confidence 455666543 2345888988765433221111 0 122445543 5799988642 35788
Q ss_pred EEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECCCCCCCCCCeeE
Q 014650 149 RFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMDEMPRFRAGCVG 228 (421)
Q Consensus 149 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 228 (421)
++|+....-+.+......+ -..+++..++++||+..... ....++++++....-+.+.... .....+
T Consensus 105 ~~~~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~----------~~~~I~~~~~dg~~~~~~~~~~--~~~P~g 171 (267)
T 1npe_A 105 VAKMDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR----------DNPKIETSHMDGTNRRILAQDN--LGLPNG 171 (267)
T ss_dssp EEETTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS----------SSCEEEEEETTSCCCEEEECTT--CSCEEE
T ss_pred EEEcCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC----------CCcEEEEEecCCCCcEEEEECC--CCCCcE
Confidence 9888654433332111111 12333331128999986421 1345778887654433332111 112334
Q ss_pred EEEc-cCCeEEEEecc
Q 014650 229 FVAE-ESGEFWVMGGY 243 (421)
Q Consensus 229 ~~~~-~~~~iyv~GG~ 243 (421)
+++. +++.||+.-..
T Consensus 172 ia~d~~~~~lyv~d~~ 187 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAG 187 (267)
T ss_dssp EEEETTTTEEEEEETT
T ss_pred EEEcCCCCEEEEEECC
Confidence 4443 23789998643
No 278
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=23.77 E-value=1.2e+02 Score=29.89 Aligned_cols=167 Identities=10% Similarity=-0.027 Sum_probs=0.0
Q ss_pred ceEEEEECCCCceEE-CCCCCCCCCCeeEEEEccCCeEEEEeccCCCccccccccceeeechheehhhhccCCcCCCCCC
Q 014650 201 SSVERYDVAKNEWVS-MDEMPRFRAGCVGFVAEESGEFWVMGGYGDSRTISGVLPVDEYYRDAVVMQLKKKKKTDDHDDG 279 (421)
Q Consensus 201 ~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~yd~~~~~~~~~~yd~ 279 (421)
+.+-+.|.++.+... +..+|.+..-|...+.-++..+|+.+..... +.+||..+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~---------------VsVid~~~~--------- 309 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPT---------------VTVLDVTRF--------- 309 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSB---------------EEEEEGGGH---------
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCe---------------EEEEECccc---------
Q ss_pred CCCC---------------ceEecCccccccccccCeEEEEccccCCCceEEEecCCceEEEeCCC--------CceeEe
Q 014650 280 DRGT---------------WREVGDMWDEWERSRIGKIVVMEDENRGRPEVFMLDKFDILRYDMGL--------NRWLKE 336 (421)
Q Consensus 280 ~~~~---------------W~~~~~~~~~~~~~~~g~i~v~GG~~~g~~~~~~~~~~~v~~yd~~~--------~~W~~~ 336 (421)
+ =..+..-|....-...|.+|+.-.. .+.|.+||..+ +.+..+
T Consensus 310 ---~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~l-----------dsqV~kwdi~~a~~~~~g~~~~~vi 375 (595)
T 1fwx_A 310 ---DAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFL-----------DSQVVKWNIEDAIRAYAGEKVDPIK 375 (595)
T ss_dssp ---HHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETT-----------TTEEEEEEHHHHHHHHHTCSCCCEE
T ss_pred ---ccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEec-----------CCcEEEEEhhHhhhhhcccccceeE
Q ss_pred cccCCCCCCC-----CceEEEEeCCeEEEEEeecCCCccccccccccccceeeEEEEEeCCcceeeEecccCCCCCCCCc
Q 014650 337 TTIPEIRPCK-----KPLGFIVLDGELYVMTVLKGSDLNETRRSQQHKRAGCLFIQIYHPRKKTWRYIFTKPPFPQPLDF 411 (421)
Q Consensus 337 ~~~~~~~~~r-----~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~i~~~p~~~~~~~~ 411 (421)
..++....+. .+-.....+..||+.-+.+....+ +-....-..-..||++.++-+.+.+.|....++.+
T Consensus 376 ~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~------~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~ 449 (595)
T 1fwx_A 376 DKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL------NVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDA 449 (595)
T ss_dssp EEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC------CCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCE
T ss_pred EEeecccccccceeccceEeCCCCCEEEEcCCCCccccc------cCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCce
No 279
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=23.22 E-value=5.5e+02 Score=25.35 Aligned_cols=116 Identities=12% Similarity=0.074 Sum_probs=62.9
Q ss_pred CCceEEEeCC-CCCCCccEEEeCCCC--cEEECCCCCCCCCCCCCcceEEEEeCCEEEEEcccccCCCCCCCCCCCCCCe
Q 014650 70 QSDLLCIFPQ-DPSISSPFLFDAANR--ACRPLPPLPCNPSTYSLCNFTSISLGPYIYLLGGSHFDARSFPLDRPLPSDS 146 (421)
Q Consensus 70 ~~~~~~~~g~-~~~~~~~~~~d~~~~--~W~~l~~l~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 146 (421)
..+++++... ....++++.+|..+. .|..+..-.. .........++.||+....+. ....
T Consensus 244 Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~------~~~~~~~~~g~~l~~~t~~~~-----------~~~~ 306 (693)
T 3iuj_A 244 DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD------ADVSLVDNKGSTLYLLTNRDA-----------PNRR 306 (693)
T ss_dssp TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS------SCEEEEEEETTEEEEEECTTC-----------TTCE
T ss_pred CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC------ceEEEEeccCCEEEEEECCCC-----------CCCE
Confidence 3444444332 223357888887654 5666633221 111223455889998876421 2357
Q ss_pred EEEEeCcc---CceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEEC
Q 014650 147 AFRFNFLT---FSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSM 216 (421)
Q Consensus 147 v~~yd~~t---~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~ 216 (421)
++.+|..+ ..|+.+.+-..... .....+ +.|++..-.+ ....+.++|......+.+
T Consensus 307 l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g--~~lv~~~~~~----------g~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 307 LVTVDAANPGPAHWRDLIPERQQVL--TVHSGS--GYLFAEYMVD----------ATARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCE--EEEEET--TEEEEEEEET----------TEEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCCccccEEEecCCCCEE--EEEEEC--CEEEEEEEEC----------CeeEEEEEECCCCeeEEe
Confidence 88998776 34877644322222 444455 6665553321 134678888886655544
No 280
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=22.20 E-value=2.2e+02 Score=25.85 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=31.5
Q ss_pred CeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceE
Q 014650 145 DSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWV 214 (421)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~ 214 (421)
..+.+||..+.+-...-..+.-.....++.+..++..++.|+.+ ..+.+||..+.+..
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------------g~i~iwd~~~~~~~ 249 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR------------GIIDIWDIRFNVLI 249 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT------------SCEEEEETTTTEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC------------CeEEEEEcCCccEE
Confidence 46899998776532221111011222333343226777777754 24888998886643
No 281
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=21.18 E-value=4.3e+02 Score=23.37 Aligned_cols=133 Identities=8% Similarity=-0.049 Sum_probs=62.0
Q ss_pred CccEEEeCCCCcEEECCCCCCCCCCCCCcceEEEEe-CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccc
Q 014650 84 SSPFLFDAANRACRPLPPLPCNPSTYSLCNFTSISL-GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAP 162 (421)
Q Consensus 84 ~~~~~~d~~~~~W~~l~~l~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 162 (421)
..+..+|+.+.+......... .-.+++.. ++++++.++. +.+.+++..+.+-.....
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~-------~V~~v~fspdg~~l~s~s~---------------~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRG-------EVKDLHFSTDGKVVAYITG---------------SSLEVISTVTGSCIARKT 214 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSS-------CCCEEEECTTSSEEEEECS---------------SCEEEEETTTCCEEEEEC
T ss_pred CEEEEeECCCCcEEEEeCCCC-------ceEEEEEccCCceEEeccc---------------eeEEEEEeccCcceeeee
Confidence 347788988776544322111 11223322 5566655542 246677776665433222
Q ss_pred cCCCccceEEEEEccCCEEEEEcCCccccccCCCCCccceEEEEECCCCceEECC--CCCCCCCCeeEEEEccCCeEEEE
Q 014650 163 MISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSRISSVERYDVAKNEWVSMD--EMPRFRAGCVGFVAEESGEFWVM 240 (421)
Q Consensus 163 ~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~~~~~~~iyv~ 240 (421)
..........+.+..++..++.++.+. .....+..+|.......... .+........++.+.-++++.+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~las 286 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKK--------GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVL 286 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESS--------SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCC--------cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEE
Confidence 221222222232222277777776531 12234556666665543321 11111112233444333788888
Q ss_pred eccCCC
Q 014650 241 GGYGDS 246 (421)
Q Consensus 241 GG~~~~ 246 (421)
|+.++.
T Consensus 287 gs~D~~ 292 (365)
T 4h5i_A 287 ASNDNS 292 (365)
T ss_dssp EETTSC
T ss_pred EcCCCE
Confidence 887654
No 282
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=21.04 E-value=3.7e+02 Score=26.00 Aligned_cols=100 Identities=17% Similarity=0.161 Sum_probs=0.0
Q ss_pred CCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCccCceeeccccCCCccceEEEEEccCCEEEEEcCCccccccCCCCCc
Q 014650 120 GPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLTFSWERIAPMISPRGSFACAAVRSLNQIIVAGGGSRHSLFGAAGSR 199 (421)
Q Consensus 120 ~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (421)
++.+++.|+.+ ..+.+||..+.....+.. ..-......+.+..+++.++.|+.+..
T Consensus 459 dg~~lasgs~D--------------~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~--------- 514 (611)
T 1nr0_A 459 DKQFVAVGGQD--------------SKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRK--------- 514 (611)
T ss_dssp TSCEEEEEETT--------------SEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSC---------
T ss_pred CCCEEEEeCCC--------------CeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCC---------
Q ss_pred cceEEEEECCC-CceEECCCCCCCCCCeeEEEEccCCeEEEEeccCCC
Q 014650 200 ISSVERYDVAK-NEWVSMDEMPRFRAGCVGFVAEESGEFWVMGGYGDS 246 (421)
Q Consensus 200 ~~~~~~yd~~t-~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~~~~ 246 (421)
+.+||..+ .+-..............++.+.-++++.+.|+.++.
T Consensus 515 ---v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~ 559 (611)
T 1nr0_A 515 ---VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 559 (611)
T ss_dssp ---EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ---EEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCc
No 283
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=20.61 E-value=3.7e+02 Score=22.37 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=26.9
Q ss_pred eCCEEEEEcccccCCCCCCCCCCCCCCeEEEEeCcc---------CceeeccccCCCccceEEEEEccCCEEEEEcCC
Q 014650 119 LGPYIYLLGGSHFDARSFPLDRPLPSDSAFRFNFLT---------FSWERIAPMISPRGSFACAAVRSLNQIIVAGGG 187 (421)
Q Consensus 119 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~v~~yd~~t---------~~W~~~~~~~~~r~~~~~~~~~~~~~iyv~GG~ 187 (421)
.++.+|+|-|. .+|+++... ..|..+ |.. .. ++...+ +++|++-|.
T Consensus 27 ~~g~~yfFkg~----------------~~Wr~~~~~~~~~p~~Is~~wpgL---P~~-ID-AA~~~~--~~~yfFkG~ 81 (219)
T 1hxn_A 27 NHGATYVFSGS----------------HYWRLDTNRDGWHSWPIAHQWPQG---PST-VD-AAFSWE--DKLYLIQDT 81 (219)
T ss_dssp TTSCEEEEETT----------------EEEESSSSSCTTCCEEGGGTCTTS---CSS-CS-EEEEET--TEEEEEETT
T ss_pred CCCcEEEEeCC----------------EEEEEcCCCCCCCceEhhhhccCC---CCC-cc-EEEEEC--CcEEEecCC
Confidence 47899999884 466665433 234333 321 22 233346 999999774
Done!