Query 014652
Match_columns 421
No_of_seqs 143 out of 667
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 15:25:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014652.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014652hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rw1a_ c.47.1.12 (A:) Hypothe 13.2 30 0.0022 25.5 1.2 24 275-298 4-27 (114)
2 d1nm3a1 c.47.1.1 (A:166-239) C 11.6 35 0.0026 22.7 1.0 25 274-298 8-32 (74)
3 d1r7ha_ c.47.1.1 (A:) Glutared 10.6 44 0.0032 22.1 1.3 25 274-298 4-28 (74)
4 d1z3ea1 c.47.1.12 (A:1-114) Re 10.2 45 0.0033 24.5 1.3 25 274-298 3-27 (114)
5 d1egoa_ c.47.1.1 (A:) Glutared 10.0 42 0.0031 23.0 1.0 22 275-296 5-26 (85)
6 d1j9ba_ c.47.1.12 (A:) Arsenat 8.8 65 0.0048 24.5 1.8 25 274-298 3-27 (138)
7 d1kqfc_ f.21.1.1 (C:) Formate 8.7 89 0.0065 25.1 2.8 42 346-388 162-204 (216)
8 d1h75a_ c.47.1.1 (A:) Glutared 7.9 65 0.0047 21.4 1.3 25 274-298 4-28 (76)
9 d1u5ta1 a.4.5.54 (A:20-164) Va 7.3 60 0.0043 25.3 0.9 33 382-417 15-47 (145)
10 d1p49a_ c.76.1.2 (A:) Steryl-s 6.5 1.4E+02 0.01 27.1 3.3 31 371-401 485-518 (553)
No 1
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=13.23 E-value=30 Score=25.47 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=22.3
Q ss_pred hcCCChhHHHHHHHHHHHhccchh
Q 014652 275 VYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 275 i~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
+||.+=|.++|+|.+.++.|+.+.
T Consensus 4 iY~~p~Cs~srka~~~L~~~~i~~ 27 (114)
T d1rw1a_ 4 LYGIKACDTMKKARTWLDEHKVAY 27 (114)
T ss_dssp EEECSSCHHHHHHHHHHHHTTCCE
T ss_pred EEECCCChHHHHHHHHHHHcCCCe
Confidence 789999999999999999998875
No 2
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=11.61 E-value=35 Score=22.71 Aligned_cols=25 Identities=16% Similarity=0.191 Sum_probs=17.9
Q ss_pred HhcCCChhHHHHHHHHHHHhccchh
Q 014652 274 AVYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 274 ai~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
-||+++.|+=+++|-+++.+++...
T Consensus 8 ~iYs~~~C~~C~~ak~lL~~~~i~~ 32 (74)
T d1nm3a1 8 SIFTKPGCPFCAKAKQLLHDKGLSF 32 (74)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTCCC
T ss_pred EEEECCCCHHHHHHHHHHHHcCCCe
Confidence 3566777777777777888887763
No 3
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=10.59 E-value=44 Score=22.09 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=20.1
Q ss_pred HhcCCChhHHHHHHHHHHHhccchh
Q 014652 274 AVYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 274 ai~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
-+|+++.|.-++++-+++++++.+.
T Consensus 4 ~iYt~~~C~~C~~ak~~L~~~~i~~ 28 (74)
T d1r7ha_ 4 TLYTKPACVQCTATKKALDRAGLAY 28 (74)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCC
T ss_pred EEEeCCCChhHHHHHHHHHHcCCce
Confidence 3678888888888888899988874
No 4
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=10.19 E-value=45 Score=24.47 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=22.7
Q ss_pred HhcCCChhHHHHHHHHHHHhccchh
Q 014652 274 AVYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 274 ai~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
-+||.+=|.++|+|.+.++.|+.+.
T Consensus 3 ~ly~~~~C~~~rka~~~L~~~~i~~ 27 (114)
T d1z3ea1 3 TLYTSPSCTSCRKARAWLEEHEIPF 27 (114)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCE
T ss_pred EEEcCCCCHHHHHHHHHHHHCCCCe
Confidence 4789999999999999999998875
No 5
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}
Probab=10.01 E-value=42 Score=23.02 Aligned_cols=22 Identities=14% Similarity=0.128 Sum_probs=15.1
Q ss_pred hcCCChhHHHHHHHHHHHhccc
Q 014652 275 VYGKGFNRSARDAWELFQSTGV 296 (421)
Q Consensus 275 i~G~~F~~Sak~a~~Li~~n~~ 296 (421)
||+++.|+-+++|-+++.+++.
T Consensus 5 iysk~~Cp~C~~aK~ll~~~~~ 26 (85)
T d1egoa_ 5 IFGRSGCPYCVRAKDLAEKLSN 26 (85)
T ss_dssp EECCTTSTHHHHHHHHHHHHHH
T ss_pred EEeCCCCHhHHHHHHHHHHcCC
Confidence 5677777777777777777653
No 6
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=8.77 E-value=65 Score=24.48 Aligned_cols=25 Identities=20% Similarity=0.473 Sum_probs=22.5
Q ss_pred HhcCCChhHHHHHHHHHHHhccchh
Q 014652 274 AVYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 274 ai~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
-+||.+=|..+|+|.++++.|+.+.
T Consensus 3 ~iY~~p~Cs~srkal~~L~~~~i~~ 27 (138)
T d1j9ba_ 3 TIYHNPACGTSRNTLEMIRNSGTEP 27 (138)
T ss_dssp EEECCTTCHHHHHHHHHHHHTTCCC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCe
Confidence 3789999999999999999999874
No 7
>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
Probab=8.74 E-value=89 Score=25.13 Aligned_cols=42 Identities=5% Similarity=0.184 Sum_probs=22.9
Q ss_pred HHHHHHHHhHHHHH-HHHHHHHHHHhcccccccCCChhHHHHHH
Q 014652 346 MGMVLVGLAMVVVE-SAVTSIYICYAEDPLLIHRWDAEFFNQMS 388 (421)
Q Consensus 346 ig~~i~~~f~~v~~-~~vdTifvCf~eD~e~~~~~~p~~~~~m~ 388 (421)
+++.+.++++++.. ...++++-+|. |.|..++.||.-++++.
T Consensus 162 ~~~vi~Hvy~a~~~~~~l~~M~tG~v-~~~~~~~~h~~w~~~~~ 204 (216)
T d1kqfc_ 162 IHAILIHMYMAFWVKGSIKGMIEGKV-SRRWAKKHHPRWYREIE 204 (216)
T ss_dssp HHHHHHHHHHHHHBTTHHHHHHTCEE-EHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccchhheeec-cHHHHHHHHHHHHHHHH
Confidence 44455666665432 35666665655 34444555666665543
No 8
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=7.94 E-value=65 Score=21.39 Aligned_cols=25 Identities=8% Similarity=0.183 Sum_probs=19.5
Q ss_pred HhcCCChhHHHHHHHHHHHhccchh
Q 014652 274 AVYGKGFNRSARDAWELFQSTGVEA 298 (421)
Q Consensus 274 ai~G~~F~~Sak~a~~Li~~n~~~~ 298 (421)
-+|+++-|.-++++-+++.++++..
T Consensus 4 ~iYs~~~C~~C~~ak~~L~~~~i~y 28 (76)
T d1h75a_ 4 TIYTRNDCVQCHATKRAMENRGFDF 28 (76)
T ss_dssp EEEECTTCHHHHHHHHHHHHTTCCC
T ss_pred EEEeCCCCccHHHHHHHHHhcCcee
Confidence 3677777888888888888888774
No 9
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.35 E-value=60 Score=25.31 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHHHhcccccccccccccccccccc
Q 014652 382 EFFNQMSETLHQRLQYRSARAREVLTNNRFDSHTQE 417 (421)
Q Consensus 382 ~~~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (421)
+..+...+.++++.++|++ |..+||.|-+++|+
T Consensus 15 ~QL~vF~~~L~~FA~kH~~---eI~~np~FR~~F~~ 47 (145)
T d1u5ta1 15 DQLMVFQERLVEFAKKHNS---ELQASPEFRSKFMH 47 (145)
T ss_dssp HHHHHHHHHHHHHHHHCTT---TTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHH---HhhcCHHHHHHHHH
Confidence 3445666778888888774 77788888887765
No 10
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.52 E-value=1.4e+02 Score=27.07 Aligned_cols=31 Identities=10% Similarity=0.144 Sum_probs=22.3
Q ss_pred cccccccC---CChhHHHHHHHHHHHHHHhcccc
Q 014652 371 EDPLLIHR---WDAEFFNQMSETLHQRLQYRSAR 401 (421)
Q Consensus 371 eD~e~~~~---~~p~~~~~m~~~~~~~~~~~~~~ 401 (421)
+||.+.+. .+|+.|.++.+.+++.+++..++
T Consensus 485 ~DP~E~~NL~~~~~~~~~~l~~~l~~~l~~~~~~ 518 (553)
T d1p49a_ 485 KDPRERNPLTPASEPRFYEILKVMQEAADRHTQT 518 (553)
T ss_dssp TCTTCCSCCCSTTTTSHHHHHHHHHHHHHHHTTS
T ss_pred cChhhhhhcccccCHHHHHHHHHHHHHHHHHhhh
Confidence 56666442 36888989989899888776543
Done!