BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014658
(421 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/424 (75%), Positives = 364/424 (85%), Gaps = 10/424 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL PT+QPRV+DH+EQIKDMITQIINN AY EGDVFFAV+K PNYG+LSGQ+L
Sbjct: 105 MDSLQCLRPTHQPRVTDHIEQIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
EN+RAGER D+RKRNPADFALWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ K
Sbjct: 165 ENHRAGERNP-DTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFK 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEI QS AACQ+SNVSYW+HNGHVTNNNEKMSKSLGN+FTIR++
Sbjct: 224 FDIHGGGSDLIFPHHENEITQSAAACQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREV 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ------ 234
TERYHPLA+RHFLISAHYRSPLNY+V QL+SASDA+FYIYQTLQDCE ALS FQ
Sbjct: 284 TERYHPLAVRHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKE 343
Query: 235 ---EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
++ K I A+ CINKLRDEF +MSDDL+TSHILTGAFQDALKFINSS++MLKK
Sbjct: 344 GAAQNSKVVGITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKK 403
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
K K QQLSLI+SL +IE E+K VL ILGLLPPG Y+E+LQQLKDKALKRA +TE+DVL+
Sbjct: 404 KLQKPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLR 463
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKK 411
IEERA ARKNK+FS+SDQ+RA+L KGIALMD+GKET+WRPCV VEQEQEA K++
Sbjct: 464 SIEERAQARKNKEFSRSDQVRANLAAKGIALMDVGKETVWRPCVPVEQEQEAVSVVKDQN 523
Query: 412 PAAT 415
P T
Sbjct: 524 PPPT 527
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/407 (78%), Positives = 361/407 (88%), Gaps = 1/407 (0%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M DLQCL PT QPRVSDHM+QIKDMITQIINNDCAY+++GDV+FAV+KSPNYGRLSG++L
Sbjct: 105 MTDLQCLTPTQQPRVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRKRNPADFALWKAAK EPSWDSPWGPGRPGWHIECSAMSAHYL+ K
Sbjct: 165 EDNRAGERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFK 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQSCAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 225 FDIHGGGIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKT 239
T+ YHPLALR+FL+ HYRSP+NYS+ QL+ AS+AVFYIYQTL+DCE LSPFQE +G+
Sbjct: 285 TDLYHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQN 344
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
I PAA+DCI+KL+ +F +MSDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQL
Sbjct: 345 VCITPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQL 404
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
S ++SL ++E EVK VL +LGLL AYSEVLQQLK KAL+RA + E+DVL LIEERA A
Sbjct: 405 SAVQSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALA 464
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPA 406
RKNK+FS+ DQIRADL KGIALMD+GKETIWRPCV VEQE +AP A
Sbjct: 465 RKNKNFSRGDQIRADLASKGIALMDVGKETIWRPCVPVEQEPQAPAA 511
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/407 (78%), Positives = 357/407 (87%), Gaps = 1/407 (0%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M DL CL PT+QPRVSDHM+QIKDMITQIINNDCAY ++GDV+FAV+KSPNYGRLSG++L
Sbjct: 105 MTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
ENNRAGERVAVDSRKRNPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL+ K
Sbjct: 165 ENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFK 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQSCAACQ+SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 225 FDIHGGGIDLIFPHHENEIAQSCAACQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE-HGKT 239
T+ YHPLALR+FL+ HYRSP+NYS+ QL+ AS+AVFYIYQTL+DCE LS FQE +G+
Sbjct: 285 TDLYHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRN 344
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
I PAA+DCI L+ +F +MSDDL+T HIL + Q+AL+FINS LNMLKKKQ KQQQL
Sbjct: 345 VCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQL 404
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
S +ESL K+ EVK VL +LGLL AYSEVLQQLK KALKRA + E+DVL LIEERA A
Sbjct: 405 SAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALA 464
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPA 406
RKNKDFSK DQIRADL KGIALMD+GKETIWRPCV V+QE +AP +
Sbjct: 465 RKNKDFSKGDQIRADLASKGIALMDVGKETIWRPCVPVQQEPQAPAS 511
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/421 (76%), Positives = 360/421 (85%), Gaps = 9/421 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M DLQCL PT+QPRV+DH+EQIKDMITQII DCAY VEGDVFFAV KSPNYG+LSGQRL
Sbjct: 105 MTDLQCLIPTHQPRVTDHVEQIKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
ENNRAGERVAVDSRKRNPADFALWKAAK GEPSW+SPWGPGRPGWHIECSAMSA YL+ K
Sbjct: 165 ENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFK 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQSCAAC++S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 225 FDIHGGGIDLIFPHHENEIAQSCAACEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE----- 235
TERYHPLALRHFLISAHYRSPLNYSV QL+S+SDAVFYIYQTLQDCE AL PFQE
Sbjct: 285 TERYHPLALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKE 344
Query: 236 ----HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
+ I A+ CI++L ++F +MSDDLNTS +LTGAFQ+ALK +N SL MLKK
Sbjct: 345 GAGQNANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKK 404
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
KQ K+QQLSLI S+ +++ EV EVLRILGL PP +EVLQQLK KALKRA LTE+DV+
Sbjct: 405 KQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMS 464
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKK 411
LIE+RA ARK++DF KSDQIR DL+ +GIALMD+GKET+WRPCV VE E++A +E
Sbjct: 465 LIEDRAVARKSQDFKKSDQIRTDLSARGIALMDVGKETVWRPCVPVENEEKAKTVVEEPT 524
Query: 412 P 412
P
Sbjct: 525 P 525
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/429 (74%), Positives = 361/429 (84%), Gaps = 13/429 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MADLQCL PT+QPRVSDH+EQIKDMITQII N Y V+GDVFF+V+K PNYG+LSGQ+L
Sbjct: 104 MADLQCLSPTHQPRVSDHLEQIKDMITQIIKNGYGYAVDGDVFFSVDKFPNYGQLSGQKL 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
EN+RAGERVAVDSRK NPADFALWKAAK GEPSW+SPWGPGRPGWHIECSAMSAHYL+ K
Sbjct: 164 ENHRAGERVAVDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTFK 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENE+AQSCAACQ+S +SYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 224 FDIHGGGIDLIFPHHENEVAQSCAACQESKISYWMHNGHVTNNNEKMSKSLGNFFTIRQI 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH---- 236
TERYHPL LRHFLISAHYRSPLNY+V QLDSASD V+YIYQT+QDCE ALS Q
Sbjct: 284 TERYHPLVLRHFLISAHYRSPLNYTVSQLDSASDTVYYIYQTMQDCEDALSQHQGENLSD 343
Query: 237 --GKTARINP---AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
GKT + +P AAE+CI LR EF RM+DDLNT+HILTGAFQ+ALKFINS+L LKK
Sbjct: 344 GLGKTGKKDPVSSAAEECIINLRSEFQTRMADDLNTAHILTGAFQEALKFINSTLTSLKK 403
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
KQPK+QQLS+I+SL ++ E++EVL +LGLL YSEVLQQLKDKALKRA + E+D+L
Sbjct: 404 KQPKKQQLSMIQSLVNVKKELREVLDVLGLLSTSTYSEVLQQLKDKALKRAGMVEDDILH 463
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEAPPAEKEKK 411
LIEER ARK+K+F KSD IRA L+ GIALMD+G+ETIWRPCV VE PP E++
Sbjct: 464 LIEERTQARKDKNFGKSDNIRAKLSSLGIALMDVGRETIWRPCVPVEPAVLVPPGEQK-- 521
Query: 412 PAATGEEQK 420
AT EQK
Sbjct: 522 --ATQAEQK 528
>gi|356575566|ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 298/431 (69%), Positives = 356/431 (82%), Gaps = 13/431 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MADLQC P+ +PRVS+H+ +IKDMITQII+N AY V+GDVF+AV+K PNYG LSGQRL
Sbjct: 106 MADLQCKTPSKEPRVSEHLNEIKDMITQIISNGYAYEVDGDVFYAVDKCPNYGMLSGQRL 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRKR+PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ K
Sbjct: 166 EHNRAGERVAVDSRKRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHK 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQS AA +S+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 226 FDIHGGGIDLIFPHHENEIAQSWAADHESHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QE 235
TERYHPLALRHFLISAHYRSPLNYS+ QL+++SDA++YI+QTLQDC+ A+SP ++
Sbjct: 286 TERYHPLALRHFLISAHYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEK 345
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+ K +IN AA++CI KL EF +MSDDL T ILTGA Q+ALKF+N+SL MLKKK K
Sbjct: 346 NEKVPQINEAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQK 405
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ QL LI+SL ++E EV +VL +LGLL +Y+EVL QLKDKAL RA LTE++VL LIEE
Sbjct: 406 RAQLQLIQSLLEVEKEVGKVLDVLGLLSSKSYAEVLHQLKDKALNRAGLTEDEVLHLIEE 465
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV--------LVEQEQEAPPAE 407
R AR NKDF+KSD++RADL KGIALMD+G E IWRPC+ +V ++Q AP E
Sbjct: 466 RTQARINKDFAKSDKMRADLATKGIALMDVGNEIIWRPCIPSEPLVAEVVHRDQRAPTVE 525
Query: 408 KEKKPAATGEE 418
+++ ++ ++
Sbjct: 526 EKQSSSSVNQK 536
>gi|357444709|ref|XP_003592632.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355481680|gb|AES62883.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 552
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 294/400 (73%), Positives = 340/400 (85%), Gaps = 5/400 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M+DL C PT +PRVSDH++QIKDMITQIINND AY V GDVF++VEK PNYG LSGQRL
Sbjct: 114 MSDLLCERPTKEPRVSDHIDQIKDMITQIINNDYAYEVNGDVFYSVEKCPNYGALSGQRL 173
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK +PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS K
Sbjct: 174 EHNRAGERVAVDSRKHHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHK 233
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQS AA ++S++SYW+HNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 234 FDIHGGGIDLIFPHHENEIAQSWAADKESHISYWLHNGHVTNNNEKMSKSLGNFFTIRQI 293
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QE 235
TERYHPLALRHFLISAHYRSPLNYS+ QL+++SDA++YI+QTL+DC LS F ++
Sbjct: 294 TERYHPLALRHFLISAHYRSPLNYSITQLETSSDAIYYIFQTLEDCRDTLSSFLQEDTEK 353
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
K IN AA++CI KL+DEF +MSDDL T ILTGA Q+ALKF+N SL MLKKK K
Sbjct: 354 KEKVPPINDAAKECIKKLKDEFQTKMSDDLQTPVILTGALQEALKFMNGSLKMLKKKMQK 413
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ QL L++SL ++E E +E+L++LGLL +Y+EVLQQLKDKALKRA LTE +VL+ IEE
Sbjct: 414 RAQLQLVQSLLEVEKEAREILKVLGLLSSLSYAEVLQQLKDKALKRAGLTEVEVLKSIEE 473
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
R AR NKDF+KSD +R DLT KGIALMD+G ETIWRPC+
Sbjct: 474 RRQARINKDFAKSDNVRTDLTAKGIALMDVGNETIWRPCI 513
>gi|356536300|ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/426 (69%), Positives = 349/426 (81%), Gaps = 18/426 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MADLQC P+ +PRVS+H+ +IKDMITQIINN AY V+GDVF+AV+K PNYG LSGQRL
Sbjct: 106 MADLQCETPSREPRVSEHLNEIKDMITQIINNGYAYEVDGDVFYAVDKCPNYGMLSGQRL 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRKR+PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YL+ K
Sbjct: 166 EHNRAGERVAVDSRKRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHK 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQS AA DS+VSYWMHNGHVTNNNEKMSKSLGNFFTIRQI
Sbjct: 226 FDIHGGGIDLIFPHHENEIAQSWAADHDSHVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-----QE 235
TERYH LALRHFLISAHYRSPLNYS+ QL+++SDA++YI+QTLQDC+ A+SP ++
Sbjct: 286 TERYHSLALRHFLISAHYRSPLNYSISQLENSSDAIYYIFQTLQDCKDAVSPLLQGETEK 345
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+ K +IN AA++CI KL EF +MSDDL T ILTGA Q+ALKF+N+SL MLKKK K
Sbjct: 346 NEKVPQINEAAKECIKKLNVEFQTKMSDDLQTPVILTGALQEALKFVNTSLKMLKKKMQK 405
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ QL LI+SL ++E V +VL +LGLL +Y+EVLQQLKDKALKRA LTE++VL LI+E
Sbjct: 406 RAQLQLIQSLLEVEKVVGKVLDVLGLLSSKSYAEVLQQLKDKALKRAGLTEDEVLHLIDE 465
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-------------LVEQEQE 402
R AR NKDF+KSD++RADL KGIALMD+G E WRPC+ +VE++Q
Sbjct: 466 RTQARINKDFAKSDKMRADLATKGIALMDVGNEITWRPCIPSEPLVAEVVQRPIVEEKQS 525
Query: 403 APPAEK 408
P +K
Sbjct: 526 TPVNQK 531
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/398 (68%), Positives = 328/398 (82%), Gaps = 5/398 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCLPPT+QPRVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ L
Sbjct: 106 MGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLL 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERVAVDSRKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS K
Sbjct: 166 EHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPK 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+I
Sbjct: 226 FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREI 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EH 236
T YHPLALRHFL+SA YRSPL+++ QL+S+S+A++Y+YQTLQD + LSP+Q E
Sbjct: 286 TASYHPLALRHFLMSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSED 345
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
G + +D I KL+ EF ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+
Sbjct: 346 GGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KK 404
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
Q++S++ SL +IE +EVL +LGLL +Y+E+L+++K K L RAE+ EE + QLIEER
Sbjct: 405 QRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEER 464
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARKNKDF+KSD+IR LTRKGIALMD+GKET+WRPC
Sbjct: 465 ITARKNKDFAKSDEIREKLTRKGIALMDIGKETVWRPC 502
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/398 (68%), Positives = 327/398 (82%), Gaps = 5/398 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL PT+QPRVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ L
Sbjct: 106 MGALQCLLPTHQPRVSEHMDHIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLL 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERVAVDSRKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMSAHYLS K
Sbjct: 166 EHTRAGERVAVDSRKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPK 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+I
Sbjct: 226 FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREI 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EH 236
T YHPLALRHFL+SA YRSPL++S QL+S+SDA++Y+YQTLQD + LSP++ E
Sbjct: 286 TASYHPLALRHFLMSAQYRSPLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSED 345
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
G A P +D I KL+ EF ++M DDLNT+HILTGA+QDALKFIN++ + LKK Q K+
Sbjct: 346 GGKAEQTPEGKDIIKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQ-KK 404
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
Q++S++ SL +IE +EVL +LGLL +Y+EVL+++K K L RAE+ EED+L+ IE+R
Sbjct: 405 QRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDR 464
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
AR NKDF+KSD+IR LTRKGIALMD GKET+WRPC
Sbjct: 465 ITARNNKDFAKSDEIREKLTRKGIALMDFGKETVWRPC 502
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/398 (66%), Positives = 319/398 (80%), Gaps = 16/398 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCLPPT+QPRVS+HM+ I MI +II DC YVVEGDVFF+V+KSPNYG+LSGQ L
Sbjct: 106 MGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLL 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERVAVDSRKRNPADFALWKAAK EPSW+SPWGPGRPGWHIECSAMS HYLS K
Sbjct: 166 EHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPK 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HNGHVT NNEKM+KS NF TIR+I
Sbjct: 226 FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREI 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----EH 236
T YHPLALRHFL+SA YRSPL+++ QL+S+S+A++ LSP+Q E
Sbjct: 286 TASYHPLALRHFLMSAQYRSPLSFTASQLESSSEALY-----------CLSPYQDALSED 334
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
G + +D I KL+ EF ++M DDLNT+HILTGA+QDALKFIN+SL+ LKK Q K+
Sbjct: 335 GGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQ-KK 393
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
Q++S++ SL +IE +EVL +LGLL +Y+E+L+++K K L RAE+ EE + QLIEER
Sbjct: 394 QRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEER 453
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARKNKDF+KSD+IR LTRKGIALMD+GKET+WRPC
Sbjct: 454 ITARKNKDFAKSDEIREKLTRKGIALMDIGKETVWRPC 491
>gi|357499285|ref|XP_003619931.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
gi|355494946|gb|AES76149.1| Cysteinyl-tRNA synthetase [Medicago truncatula]
Length = 584
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 270/403 (66%), Positives = 315/403 (78%), Gaps = 37/403 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M+DL C PT +PRVSDH++QIKDMIT+IINND AY V+GDVF++VEK PNYG LSGQR
Sbjct: 161 MSDLLCERPTKEPRVSDHIDQIKDMITKIINNDFAYEVDGDVFYSVEKFPNYGALSGQR- 219
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
KR+PADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSA YLS K
Sbjct: 220 --------------KRHPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSACYLSHK 265
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDLIFPHHENEIAQ+ AA ++S + YW+HNGHVTNNNEKMSKSLGNFFT+R+I
Sbjct: 266 FDIHGGGIDLIFPHHENEIAQNRAADKESRIKYWLHNGHVTNNNEKMSKSLGNFFTVREI 325
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQ------TLQDCEVALSPF- 233
TERYHPLALRHFLISAHYR+PLNYS+ QL+++SDA++YI+Q TL+DC ALS F
Sbjct: 326 TERYHPLALRHFLISAHYRAPLNYSIAQLETSSDAIYYIFQTSSSLKTLEDCRDALSSFL 385
Query: 234 -QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
++ K +IN AAE CINKL++EF M+DDL T IL GA +ALKF+N SL
Sbjct: 386 QEDSEKKDQIN-AAEKCINKLKEEFQTEMNDDLQTHVILKGALLEALKFMNRSL------ 438
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
Q KQ SL K+E EV+EVL++LGLL +Y+EVLQQLKDKALKRA LTE++VL+L
Sbjct: 439 QFKQ-------SLLKVEQEVREVLKVLGLLSSLSYAEVLQQLKDKALKRAGLTEKEVLKL 491
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
IEER AR NKDF+KSD IR DLT KGIAL D+ E IWRPC+
Sbjct: 492 IEERKQARINKDFAKSDNIRTDLTAKGIALEDVDNEMIWRPCI 534
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/404 (64%), Positives = 312/404 (77%), Gaps = 8/404 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+V+K P YGRLSG+++
Sbjct: 76 MTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKV 135
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL
Sbjct: 136 EDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYS 195
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 196 FDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 255
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FLI HYRSP+NYS +QL+SASD VFYIYQTL DC+ A+ + K
Sbjct: 256 IDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQ-DDMTKKD 314
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ P DCINK ++F MSDDL+T +L A D LK IN ++L ++ K+Q+L
Sbjct: 315 SVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKQELR 370
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L ESL +E +++VL ILGL+ P +YSE L QL++KALKR++LTE+ +LQ IEER AR
Sbjct: 371 L-ESLAALEKVIRDVLTILGLM-PASYSEALLQLREKALKRSKLTEDHILQKIEERTMAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
KNK++ KSD IR DL GIALMD T WRP + L QEQ A
Sbjct: 429 KNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVA 472
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/404 (64%), Positives = 312/404 (77%), Gaps = 8/404 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +P VSDHM QI DMI QII+NDCAY VEGDV+F+V+K P YGRLSG+++
Sbjct: 173 MTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKV 232
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL
Sbjct: 233 EDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYS 292
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 293 FDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQV 352
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FLI HYRSP+NYS +QL+SASD VFYIYQTL DC+ A+ + K
Sbjct: 353 IDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQ-DDMTKKD 411
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ P DCINK ++F MSDDL+T +L A D LK IN ++L ++ K+Q+L
Sbjct: 412 SVPPHILDCINKFYNDFLTSMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKQELR 467
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L ESL +E +++VL ILGL+ P +YSE L QL++KALKR++LTE+ +LQ IEER AR
Sbjct: 468 L-ESLAALEKVIRDVLTILGLM-PASYSEALLQLREKALKRSKLTEDHILQKIEERTMAR 525
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
KNK++ KSD IR DL GIALMD T WRP + L QEQ A
Sbjct: 526 KNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQEQVA 569
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/404 (62%), Positives = 303/404 (75%), Gaps = 7/404 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +PRVSDHM QI DMI +I+ N AY ++GDV+F+V+K P YGRLSG++L
Sbjct: 93 MVYLHCLPPSVEPRVSDHMPQIIDMIERILENGYAYRIDGDVYFSVDKLPEYGRLSGRKL 152
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWK+AK GEP WDSPWGPGRPGWHIECSAMSA YL
Sbjct: 153 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGHS 212
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC+DSN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 213 FDIHGGGMDLVFPHHENEIAQSCAACRDSNISYWVHNGFVTIDSEKMSKSLGNFFTIRQV 272
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHPLALR FL+ HYRSP+NYS +QL+SAS+ +FYIYQTL DCE LS + +
Sbjct: 273 INLYHPLALRLFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCENILSQHRVAFEKD 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I P + INK D MSDDL+T +L A D LK IN L+ K K +Q+
Sbjct: 333 AIPPDTINDINKFHDTLVTSMSDDLHTP-VLLSALSDPLKIINDMLHTRKGK----KQIK 387
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
IES+ +E V+ L +LGL+PP Y+E LQQL++KAL+RA+LTE+ +LQ IEER AR
Sbjct: 388 RIESIAALEKMVRNALMVLGLMPP-TYNEALQQLREKALRRAKLTEDQILQKIEERTVAR 446
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
K+KD+ KSD IR DL GIALMD T WRP + L QEQ+
Sbjct: 447 KDKDYEKSDAIRKDLAALGIALMDSPDGTSWRPAIPLALQEQQV 490
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/404 (61%), Positives = 302/404 (74%), Gaps = 13/404 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +P VSDHM QI +MI QI++N CAY ++GDV+F+++ P YG+LSG++L
Sbjct: 169 MVYLHCLPPSIEPCVSDHMPQIINMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKL 228
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL
Sbjct: 229 EDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHS 288
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC+ SN+SYW+HNG VT N+EKMSKSLGNFFTIRQ+
Sbjct: 289 FDIHGGGMDLVFPHHENEIAQSCAACRGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQV 348
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS +QL+SAS+ +FYIYQTL DCE +S + +
Sbjct: 349 IDLYHPLALRFFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKD 408
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ D INK D F MSDDL+T +L A D LK IN L+ K+
Sbjct: 409 SVPSDTLDGINKFSDVFVTSMSDDLHTP-VLLAALSDPLKIINDMLHTRKR--------- 458
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I+SL +E V++ L +LGL+ P YSEVLQQL++KAL+RA+LTEE VLQ IEER AR
Sbjct: 459 -IQSLAALEKIVRDALSVLGLM-PTTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVAR 516
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
KN+D+ +SD IR DL GIALMD T WRP + L QEQ+A
Sbjct: 517 KNRDYERSDAIRKDLATHGIALMDSPDGTSWRPAIPLAMQEQQA 560
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/404 (61%), Positives = 303/404 (75%), Gaps = 7/404 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +P+VSDHM QI DMI QI++N AY V+GDV+F V+K P YG+LSG++L
Sbjct: 176 MMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAYSVDGDVYFNVDKFPEYGQLSGRKL 235
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERV+VDSRK+NPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL
Sbjct: 236 EDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYS 295
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 296 FDIHGGGMDLVFPHHENEIAQSCAACRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQV 355
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L L+SASD +FYIYQTL DC +S E
Sbjct: 356 IDLYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDCRTVISQEDESSFKG 415
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I P+ + INK + F MSDD++T +L A D LK IN ++L ++ K+Q+
Sbjct: 416 PIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFR 471
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ ESL +E + VL ILGL+ P +YSE LQQLK+KAL RA++T + VLQ IEER AAR
Sbjct: 472 M-ESLAALEKIIGNVLSILGLM-PASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAAR 529
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
KNK++ KSD IR DL GI+LMD T WRP V L QE +A
Sbjct: 530 KNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQA 573
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/404 (61%), Positives = 302/404 (74%), Gaps = 7/404 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP+ +P+VSDHM QI DMI QI++N AY V+GDV+F V+K P YG+LSG++L
Sbjct: 176 MMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAYCVDGDVYFNVDKFPEYGQLSGRKL 235
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERV+VDSRK+NPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL
Sbjct: 236 EDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSASYLGYS 295
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCA C+ SNVSYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 296 FDIHGGGMDLVFPHHENEIAQSCATCRTSNVSYWVHNGFVTIDSEKMSKSLGNFFTIRQV 355
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L L+SASD +FYIYQTL DC +S E
Sbjct: 356 IDLYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDCRTVVSQEDESSFKG 415
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I P+ + INK + F MSDD++T +L A D LK IN ++L ++ K+Q+
Sbjct: 416 SIAPSLVEEINKFSNVFLTSMSDDIHTPVVL-AALSDPLKIIN---DLLHTRKGKKQEFR 471
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ ESL +E + VL ILGL+ P +YSE LQQLK+KAL RA++T + VLQ IEER AAR
Sbjct: 472 M-ESLAALEKIIGNVLSILGLM-PASYSEALQQLKEKALTRAKMTNDQVLQKIEERNAAR 529
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEA 403
KNK++ KSD IR DL GI+LMD T WRP V L QE +A
Sbjct: 530 KNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQA 573
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/398 (63%), Positives = 304/398 (76%), Gaps = 12/398 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CL P+ +P+VS+HM QI DMI +I+NN AY+V+GDV+F VEK P YG+LS + L
Sbjct: 165 MVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDL 224
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWK+AK GEP W+S WGPGRPGWHIECSAMSA YL
Sbjct: 225 EDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESRWGPGRPGWHIECSAMSAAYLGYS 284
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDL+FPHHENEIAQSCAAC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+
Sbjct: 285 FDIHGGGIDLVFPHHENEIAQSCAACKKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQV 344
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR+FL+SAHYRSP+NYS +QL+SASD VFYIY+TL +CE L+ +H +T
Sbjct: 345 IDIYHPLALRYFLMSAHYRSPINYSNIQLESASDRVFYIYETLHECESFLN---QHDQTI 401
Query: 241 R---INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
R I P D I+K D F MSDDL+T +L G D LK IN ++L ++ K+Q
Sbjct: 402 RKDSIPPDTLDIIDKFHDVFLTSMSDDLHTPVVLAG-MSDPLKSIN---DLLHTRKGKKQ 457
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
Q IESL +E V++VL +LGL+ P +Y EVLQQLK+KALKRA LTE+DVLQ IEERA
Sbjct: 458 QFR-IESLSALEKSVRDVLTVLGLM-PASYFEVLQQLKEKALKRANLTEDDVLQKIEERA 515
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
AAR K+++KSD IR DL GI LMD T WRP +
Sbjct: 516 AARIQKEYAKSDAIRKDLAVVGITLMDSPNGTTWRPAI 553
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/402 (62%), Positives = 305/402 (75%), Gaps = 12/402 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 239
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 181 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 240
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 298
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 241 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 295
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ESL +E +++ VL +LGLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +
Sbjct: 296 ---LESLSAMEEKIRMVLSVLGLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTS 351
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQ 399
ARK K + KSD+IR +L GIALMD T WRP V L EQ
Sbjct: 352 ARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 393
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/402 (61%), Positives = 305/402 (75%), Gaps = 11/402 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 171 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 230
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 231 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 290
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 291 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 350
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 239
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 351 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 298
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 411 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 465
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ESL +E +++ VL +LGLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +
Sbjct: 466 ---LESLSAMEEKIRMVLSVLGLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTS 521
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
ARK K + KSD+IR +L GIALMD T WRP V + ++
Sbjct: 522 ARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 563
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/402 (61%), Positives = 305/402 (75%), Gaps = 11/402 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+L CLPP+ +PRVSDH++QI +MI QII+NDCAY + GDV+F+VE P YG LSG++L
Sbjct: 171 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 230
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RK+NPADFALWKAAK GEPSWDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 231 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 290
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 291 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 350
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKT 239
TE YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTLQDCE + Q + G
Sbjct: 351 TELYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 298
+N +CI KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 411 LPVN--TTNCIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR-- 465
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ESL +E +++ VL +LGLL P +Y E LQQL++KAL+RA +TEE VLQ IEER +
Sbjct: 466 ---LESLSAMEEKIRMVLSVLGLL-PSSYYEALQQLREKALRRASMTEEQVLQKIEERTS 521
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
ARK K + KSD+IR +L GIALMD T WRP V + ++
Sbjct: 522 ARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSVPLSEQ 563
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/395 (62%), Positives = 299/395 (75%), Gaps = 8/395 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CL P+ +P+VS+HM QI DMI +I+NN AY+V+GDV+F VEK P YG+LS + L
Sbjct: 163 MVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDL 222
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMSA YL
Sbjct: 223 EDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYS 282
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDL+FPHHENEIAQSCAAC+ S++S WMHNG VT ++ KMSKSLGNFFTIRQ+
Sbjct: 283 FDIHGGGIDLVFPHHENEIAQSCAACKKSDISIWMHNGFVTIDSVKMSKSLGNFFTIRQV 342
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR+FL+SAHYRSP+NYS +QL+SASD VFYIY+TL +CE L+ Q +
Sbjct: 343 IDVYHPLALRYFLMSAHYRSPINYSNIQLESASDRVFYIYETLHECESFLN--QHDQRKD 400
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
P D I+K D F MSDDL+T +L G D LK IN ++L ++ K+QQ
Sbjct: 401 STPPDTLDIIDKFHDVFLTSMSDDLHTPVVLAG-MSDPLKSIN---DLLHARKGKKQQFR 456
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
IESL +E V++VL +LGL+ P +YSEVLQQLK KALKRA TEE+VLQ IEERA AR
Sbjct: 457 -IESLSALEKSVRDVLTVLGLM-PASYSEVLQQLKVKALKRANFTEEEVLQKIEERATAR 514
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
K+++KSD IR DL GI LMD T WRP +
Sbjct: 515 MQKEYAKSDAIRKDLAVLGITLMDSPNGTTWRPAI 549
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/395 (60%), Positives = 297/395 (75%), Gaps = 6/395 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 180
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 181 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 240
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ IN R EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 241 SVPSDTLTSINTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-- 297
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 298 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDAR 354
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
KNK++ +SD IR DL + GIALMD + T WRP +
Sbjct: 355 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAI 389
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/402 (60%), Positives = 301/402 (74%), Gaps = 6/402 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M+ L CLPP+ +PRVSDHM QI DMI QI++N AY V+GDV+F+VEK P+YGRLSG++L
Sbjct: 182 MSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKL 241
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVA+DSRKRNPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL
Sbjct: 242 EDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYS 301
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEI QSCAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+
Sbjct: 302 FDIHGGGMDLMFPHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQV 361
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NYS + L+SAS+ +FYIYQTLQD + LS +
Sbjct: 362 IELYHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKD 421
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I CIN L++ F MSDDL+T +L A D LK IN ++L ++ K+++L
Sbjct: 422 SIPQDIVSCINDLQNSFVISMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR 477
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ESL +E +K VL LGL+ P +YSE L QL++KALKR + +E +V Q IEER AR
Sbjct: 478 -VESLAALEKTIKHVLTALGLM-PSSYSEALHQLREKALKRVKFSETEVQQKIEERDMAR 535
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQE 402
KNK++ KSD IR +L GIALMD + T WRP V +QE
Sbjct: 536 KNKEYEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQE 577
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/395 (60%), Positives = 297/395 (75%), Gaps = 6/395 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 93 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 152
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 153 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 212
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 213 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 272
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 273 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ IN R EF A MSDDL T + A + LK IN ++ K K+ +++
Sbjct: 333 SVPSDTLTSINTFRTEFVASMSDDLLTP-VTLAAMSEPLKTINDLIHTRKGKKQARRE-- 389
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 390 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDAR 446
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
KNK++ +SD IR DL + GIALMD + T WRP +
Sbjct: 447 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAI 481
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/401 (62%), Positives = 303/401 (75%), Gaps = 30/401 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL PT QPRVSDHME I MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL
Sbjct: 102 MTALQCLIPTRQPRVSDHMEHIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRL 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ +AG+RVAVDSRKRNPADFALW AAK+GEPSW+SPWGPGRPGWHIECSAMSAHYLS +
Sbjct: 162 DHTQAGKRVAVDSRKRNPADFALWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPR 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIR+I
Sbjct: 222 FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREI 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH---- 236
T +YHPLALRHFL+SA YRSPLNYSV QL+S+SDA++ YQTL+D LSP++E
Sbjct: 282 TAKYHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGD 341
Query: 237 -GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
GKT + A E + ++ALKFIN S++ LKK Q K
Sbjct: 342 VGKTQQTAEAKE-----------------------MIKKVKNALKFINVSISKLKKIQ-K 377
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+Q++SLI SL ++E V+EVL +LGLL +Y E L+++K KAL RA + EE+VL+ I+E
Sbjct: 378 KQRMSLIVSLVEVEKAVREVLDVLGLLTTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDE 437
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWRPCV 395
R ARKNKDF +SDQIR L KGIAL D+ GK+T+WRPC
Sbjct: 438 RKLARKNKDFKRSDQIRELLAAKGIALEDIPGKDTVWRPCT 478
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/395 (60%), Positives = 297/395 (75%), Gaps = 6/395 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL P+ QPRVSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 163 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 222
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD+RK++PADFALWKAAK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 223 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 282
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 283 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 342
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE AL +
Sbjct: 343 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENG 402
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ IN R EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 403 SVPSDTLTSINTFRTEFVASMSDDLLTPVTL-AAMSEPLKTINDLIHTRKGKKQARRE-- 459
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 460 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDAR 516
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
KNK++ +SD IR DL + GIALMD + T WRP +
Sbjct: 517 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAI 551
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 243/402 (60%), Positives = 300/402 (74%), Gaps = 6/402 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M+ L CLPP+ +PRVSDHM QI DMI QI++N AY V+GDV+F+VEK P+YGRLSG++L
Sbjct: 182 MSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKL 241
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVA+DSRKRNPADFALWK+AK GEP W+SPWGPGRPGWHIECSAMS+ YL
Sbjct: 242 EDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYS 301
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEI QSCAAC +SN+ YW+HNG VT N+EKMSKSLGNFFTIRQ+
Sbjct: 302 FDIHGGGMDLMFPHHENEIVQSCAACCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQV 361
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NYS + L+SAS+ +FYIYQTLQD + LS +
Sbjct: 362 IELYHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKD 421
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I CIN L++ F MSDDL+T +L A D LK IN ++L ++ K+++L
Sbjct: 422 SIPQDIVSCINDLQNSFVISMSDDLHTPVVL-AALSDPLKTIN---DLLHTRKGKKRELR 477
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ESL +E +K VL LGL+ P +YSE L QL++KALKR + +E +V Q IEER AR
Sbjct: 478 -VESLAALEKTIKHVLTALGLM-PSSYSEALHQLREKALKRVKFSETEVQQKIEERDMAR 535
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQE 402
K K++ KSD IR +L GIALMD + T WRP V +QE
Sbjct: 536 KYKEYEKSDAIRKELAAVGIALMDSPEGTTWRPVVPTALQQE 577
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/403 (60%), Positives = 301/403 (74%), Gaps = 13/403 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+LQCLPP+ +PRVSDH+ +I +MI QI++N CAYVV GDV+F+VE P YG LSG++L
Sbjct: 173 MANLQCLPPSVEPRVSDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKL 232
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 233 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 292
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 293 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 352
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE + Q+ G
Sbjct: 353 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESC---QQQGSNT 409
Query: 241 --RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQ 297
+ P + I KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 410 GNSLPPNTLNYIQKLHDEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR- 467
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+E+L ++ +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE VLQ IEER
Sbjct: 468 ----LEALSALDEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVLQKIEERT 522
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
AARK K + KSD+IR +L GIALMD T WRP + + +E
Sbjct: 523 AARKAKQYEKSDEIRKELAAVGIALMDGPNGTTWRPSLPLSEE 565
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/405 (60%), Positives = 304/405 (75%), Gaps = 15/405 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 165 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 224
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 225 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 284
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 285 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 344
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++
Sbjct: 345 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSN 400
Query: 241 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQ 296
NP + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 401 TGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR 459
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER
Sbjct: 460 -----LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEER 513
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 401
AARK K + KSD+IR +L GIALMD T WRP + + +E+
Sbjct: 514 TAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 558
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/405 (60%), Positives = 304/405 (75%), Gaps = 15/405 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 180
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NY++ QL+ ASD ++Y YQTL+DCE +H ++
Sbjct: 181 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCE----EICQHQQSN 236
Query: 241 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQ 296
NP + +N KL DEF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 237 TGNPLPANTLNYIQKLHDEFETSMSDDLHTS-VALAAMSEPLKVMNDLLHTRKGKKQDKR 295
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER
Sbjct: 296 -----LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEER 349
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 401
AARK K + KSD+IR +L GIALMD T WRP + + +E+
Sbjct: 350 TAARKAKQYEKSDEIRKELAAVGIALMDGPDGTTWRPSLPLPEEE 394
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/402 (60%), Positives = 300/402 (74%), Gaps = 11/402 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+LQCLPP+ +PRVSDH+++I +MI QI++N CAYVV GDV+F+V+ P+YG LSG++L
Sbjct: 175 MANLQCLPPSVEPRVSDHIDEIINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKL 234
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERV+VD RKRNPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSAHYL
Sbjct: 235 DDNRAGERVSVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 294
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS ++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 295 FDIHGGGEDLIFPHHENEIAQSRAACCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 354
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NY++ QL+ SD ++Y YQTL DCE Q+ T
Sbjct: 355 IEMYHPLALRMFLLGTHYRSPINYTIEQLNVTSDRLYYTYQTLLDCEEICQ--QQQSNTG 412
Query: 241 RINPAAE-DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQ 298
PA + I KL +EF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 413 NSLPANTLNYIQKLHEEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQDKR-- 469
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ESL +E +++ VL +LGLL P +Y E LQQL+DKAL+RA +TEE V+Q IEER A
Sbjct: 470 ---LESLSALEEKIRVVLSVLGLL-PSSYHEALQQLRDKALRRASITEELVVQKIEERTA 525
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
ARK K + KSD+IR +L GIALMD T WRP + + +E
Sbjct: 526 ARKAKQYEKSDEIRKELAAIGIALMDGPDGTTWRPSLPILEE 567
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/406 (59%), Positives = 295/406 (72%), Gaps = 7/406 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M LQCL P+ QP VSDH+ QI D+I QI++N AY V+GD++F+V+K P YG+LSG++L
Sbjct: 163 MEQLQCLDPSVQPLVSDHIPQIVDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 222
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD+RK++PADFALWK AK GEP W+SPWG GRPGWHIECSAMSA YL
Sbjct: 223 EDNRAGERVAVDTRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 282
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL+FPHHENEIAQSCAAC SN+SYW+HNG VT ++EKMSKSLGNFFTIRQ+
Sbjct: 283 FDIHGGGMDLVFPHHENEIAQSCAACDSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQV 342
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR FL+ HYRSP+NYS L+SAS+ +FYIYQTL DCE L
Sbjct: 343 IDLYHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGND 402
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ IN EF A MSDDL T L A + LK IN ++ K K+ +++
Sbjct: 403 SVPSDTLTTINTFHSEFVASMSDDLLTPVTL-AAMSEPLKTINDIIHTRKGKKQARRE-- 459
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
ESL+ +E +++VL ILGL+P +YSEVL+QLK+KALKRA L EEDVLQ ++ER AR
Sbjct: 460 --ESLKALETTIRDVLTILGLMPT-SYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDAR 516
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV-LVEQEQEAPP 405
KNK++ +SD IR DL GIALMD + T WRP + L QE P
Sbjct: 517 KNKEYERSDAIRKDLASVGIALMDSPEGTTWRPAIPLALQEPVTTP 562
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/396 (60%), Positives = 300/396 (75%), Gaps = 9/396 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPP+ +PRVSDH++QI +MI QI++N CAYVV GDV+F+V+ P YG LSG++L
Sbjct: 168 MAHLQCLPPSVEPRVSDHIDQIVNMIKQILDNGCAYVVSGDVYFSVDNFPEYGMLSGRKL 227
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGER+AVD RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL +
Sbjct: 228 DDNRAGERIAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNS 287
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N++KMSKSLGNF TIR++
Sbjct: 288 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKV 347
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHPLALR FL+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q + + A
Sbjct: 348 IEQYHPLALRMFLLGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQKDQINSEDA 407
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQL 299
+ CI KL++EF MSDDL+TS + A + LK +N L+ K KKQ K+
Sbjct: 408 -LPATTTHCIEKLQNEFETSMSDDLHTS-VALAAISEPLKVMNDLLHTRKGKKQEKR--- 462
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ESL +E +++ VL +LGL+ P +Y E LQQL++KAL+RA +TE+ VLQ IEER +A
Sbjct: 463 --LESLFALEEKIRTVLSVLGLM-PSSYYEALQQLREKALQRASITEDQVLQKIEERTSA 519
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
RK K + KSD+IR +L GIALMD T WRP V
Sbjct: 520 RKAKQYEKSDEIRKELAALGIALMDGPDGTTWRPSV 555
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/396 (60%), Positives = 294/396 (74%), Gaps = 9/396 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPP+ +PRVSDH++QI MI QII+N CAYVV GDV+F+V+ P Y +LSG++L
Sbjct: 173 MAHLQCLPPSVEPRVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKL 232
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RK+NPADFALWKAAK GEP WDSPWGPGRPGWHIECSAMSA YL +
Sbjct: 233 DDNRAGERVAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNS 292
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AAC DS+++YW+HNG V N +KMSKSLGNF TIR++
Sbjct: 293 FDIHGGGEDLIFPHHENEIAQSRAACCDSSINYWVHNGFVNVNGQKMSKSLGNFITIRKV 352
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHPLALR FL+ HYRSP+NY+V QL+ ASD ++Y YQTL+D E + Q+ +
Sbjct: 353 IELYHPLALRMFLLGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQ--QDQSSSG 410
Query: 241 RINP-AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
P CI KL ++F MSDDL+TS + A + LK +N L+ K K+ +++
Sbjct: 411 DSLPFTTTHCIEKLHEDFETSMSDDLHTS-VALAAVSEPLKVMNDLLHTRKGKKQEKR-- 467
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ESL +E +V+ VL +LGL+ P +Y E LQQL+ KAL+RA +TEE VLQ IEER AA
Sbjct: 468 --LESLAALEEKVRMVLSVLGLM-PSSYHEALQQLRGKALRRACVTEEQVLQKIEERTAA 524
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
RK K F +SD+IR +L GIALMD T WRP V
Sbjct: 525 RKAKQFGRSDEIRDELAALGIALMDGPDGTAWRPSV 560
>gi|343172442|gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 310/400 (77%), Gaps = 7/400 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
M DLQCLPP++QP VSDH+++I +MI ++IN D AY ++ GDV+F+V+K YG LS ++
Sbjct: 6 MDDLQCLPPSHQPCVSDHIKEIIEMIEELINKDSAYSLDDGDVYFSVDKFERYGLLSNRK 65
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA YL+
Sbjct: 66 LEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSAKYLTY 125
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+FTIRQ
Sbjct: 126 AFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNYFTIRQ 185
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----E 235
+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDA++ IYQTL DC AL PFQ E
Sbjct: 186 VTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAIYRIYQTLLDCSDALKPFQENVNE 245
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+ K + P +L RMSDDL+ + IL G+ Q+ALK IN LN LKKKQ +
Sbjct: 246 NAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINIELNGLKKKQKQ 304
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV QLIEE
Sbjct: 305 QKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLDQLKEKALLRAEMTEDDVSQLIEE 363
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
RA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 364 RAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|343172444|gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
Length = 411
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 309/400 (77%), Gaps = 7/400 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
M DLQCLPP++QP VSDH+ +I +MI ++I D AY ++ GDV+F+V+K YG LS ++
Sbjct: 6 MDDLQCLPPSHQPCVSDHIREIIEMIEELIKKDSAYSLDDGDVYFSVDKFERYGLLSNRK 65
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE+NRAGERV+VD RKRNPADFALWK+AK GE SW SPWG GRPGWHIECSAMSA YL+
Sbjct: 66 LEDNRAGERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRPGWHIECSAMSAKYLTY 125
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGGIDLIFPHHENE+AQSCAAC ++NV YW+HNG V N EKMSKS GN+FTIRQ
Sbjct: 126 SFDIHGGGIDLIFPHHENELAQSCAACNEANVGYWVHNGFVNINGEKMSKSTGNYFTIRQ 185
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ----E 235
+T+RYHPLA+R+FL+S +Y SP+N+S+ Q D ASDAV+ IYQTL DC AL PFQ E
Sbjct: 186 VTDRYHPLAVRYFLLSMNYGSPVNFSLYQTDLASDAVYRIYQTLLDCSDALKPFQENVNE 245
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+ K + P +L RMSDDL+ + IL G+ Q+ALK IN+ LN LKKKQ +
Sbjct: 246 NAKASSKKP-VNLLTLRLLMILRKRMSDDLHIADILKGSLQEALKSINNELNGLKKKQKQ 304
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
Q+ L+ ++SL ++E E++ VL +LGLL P YSEVL QLK+KAL RAE+TE+DV QLIEE
Sbjct: 305 QKLLA-VQSLTELEAEIRYVLEVLGLLSPAPYSEVLHQLKEKALLRAEMTEDDVSQLIEE 363
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
RA ARKNK+F KSD+IR LT KGI+LMD+ T WRPCV
Sbjct: 364 RAMARKNKEFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/403 (56%), Positives = 299/403 (74%), Gaps = 11/403 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M L+CLPP +PRVSDH+ QI MI+QII N YV+EG DV+F V+ P YG LSG++
Sbjct: 93 MELLRCLPPNVEPRVSDHIPQIIKMISQIIENKNGYVMEGGDVYFEVDTLPTYGCLSGRK 152
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
E NRAGERV VD+RKRNPADFALWK+AK GEP+WDSPWGPGRPGWHIECSAMSA +L
Sbjct: 153 QEENRAGERVLVDNRKRNPADFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSAEHLGH 212
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
KFDIHGGG+DLIFPHHENEIAQSCAAC DS V YW+HNG VT +NEKMSKS+GNFFTIR+
Sbjct: 213 KFDIHGGGMDLIFPHHENEIAQSCAACADSRVGYWLHNGFVTVDNEKMSKSVGNFFTIRE 272
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ E YHPLALR FL+ HYR+P+NYS QL+ ASD VFYI+QTL DCE LS Q+ K
Sbjct: 273 VLELYHPLALRWFLLGTHYRAPVNYSKRQLEVASDRVFYIFQTLVDCEQILS--QQVDKV 330
Query: 240 ARINPAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
A NP+ E + + +++ F M+DDLNT ++ +F ++ KF+N ++ K ++ K +
Sbjct: 331 AACNPSKEAIELVKSIKNTFRTSMADDLNTP-VVVASFSESFKFMNDLMHTRKGRKDKTR 389
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ SL+ + E++EV+ +LG P +YS+VL +++ ALKRA ++ D+ ++ERA
Sbjct: 390 ----LVSLQLLITEIQEVMNVLGFQIP-SYSKVLDEIRALALKRAGMSMNDLAARLQERA 444
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
+AR+ KD+++SDQIR +L GI LMD G T+WRP V+ E++
Sbjct: 445 SAREAKDYARSDQIRLELAAAGIGLMDGGDGTLWRPIVVAEEQ 487
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/440 (55%), Positives = 298/440 (67%), Gaps = 45/440 (10%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLP T +P+VS+HM QI +MI +I+NN AY V+GD++F VEK P YG+LS + L
Sbjct: 174 MVTLNCLPATVEPKVSEHMPQIIEMIEKILNNGYAYDVDGDIYFNVEKFPEYGKLSSRGL 233
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVDSRK+NPADFALWK+ K GEP W+SPWGPGRPGWHIECSAMSA YL
Sbjct: 234 EDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECSAMSAAYLGYS 293
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGGIDL+FPHHENEIAQSCAAC S++S WMHNG VT ++ KMSKSLGNFFTIRQ+
Sbjct: 294 FDIHGGGIDLVFPHHENEIAQSCAACSKSDISVWMHNGFVTIDSVKMSKSLGNFFTIRQV 353
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHPLALR+FL+SAHYRSP+NYS + L+SASD VFYIY+TL +CE S ++H +T
Sbjct: 354 VDVYHPLALRYFLMSAHYRSPMNYSNIHLESASDRVFYIYETLHECE---SFLKQHDQTV 410
Query: 241 R---INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL----------- 286
R + P I D F MSDDL+T L G D LK IN L
Sbjct: 411 RKDSVPPDTLSIIGNFYDVFRTSMSDDLHTPVALAG-MSDPLKLINDLLHTRKWISGRAR 469
Query: 287 --------------------NM----LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL 322
NM L+ K+QQ IESL ++ + +VL +LGL+
Sbjct: 470 HHSIKNTIIREKIVVHVILQNMKDSRLRWFGGKKQQFR-IESLAALKKSIGDVLTVLGLM 528
Query: 323 PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIAL 382
P +Y EVLQQLK+KAL RA LTE+++L+ IEER AAR K+++KSD IR L GIAL
Sbjct: 529 -PSSYYEVLQQLKEKALNRANLTEDEILKKIEERDAARIQKEYAKSDSIRKGLAVLGIAL 587
Query: 383 MDMGKETIWRPCV-LVEQEQ 401
MD T WRP + L QEQ
Sbjct: 588 MDSPNGTTWRPTIPLPLQEQ 607
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/407 (58%), Positives = 304/407 (74%), Gaps = 13/407 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
MA+L CLPP+ +PRV+DH+ QI +MI QI+ N AYVVE GDV+F+V+K P YG LSG++
Sbjct: 203 MAELNCLPPSVEPRVTDHINQIIEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRK 262
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L++NRAGER+AVDSRK+NPADFALWK+AK EP WDSPWGPGRPGWHIECSAMSA +L
Sbjct: 263 LDDNRAGERIAVDSRKQNPADFALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGY 322
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG+DLIFPHHENEIAQSCA+C DSNV YW+HNG VT + EKMSKSLGNFFTIR+
Sbjct: 323 CFDIHGGGVDLIFPHHENEIAQSCASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIRE 382
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ E YHPLALR FL HYRS LNYS QL++AS+ +FYIYQTL+DCE LS H +
Sbjct: 383 VLESYHPLALRLFLSGTHYRSQLNYSKSQLENASERLFYIYQTLKDCEECLS---GHVRQ 439
Query: 240 ARINPAAEDC---INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ P ED IN + + F + MS+DL+ + L A + LK +N +++ +Q ++
Sbjct: 440 SIGQPIPEDIQKRINNIHNAFSSSMSNDLHIAMALD-ALSEPLKIMN---DLMFTRQGRK 495
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
Q+L + E L +E + +++L LGL+ P +YSEVL QLK KAL+RA +TE++VLQ IE+R
Sbjct: 496 QKLRM-EFLDSLEVKTRDLLSDLGLMSP-SYSEVLLQLKSKALRRAGITEDEVLQAIEKR 553
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQEA 403
A AR K++S+SD+IR L GIALMD T WRP + +E+E+
Sbjct: 554 ADARAAKNYSESDRIRRKLAVLGIALMDEPSGTTWRPAIPLEEEEHV 600
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/416 (56%), Positives = 287/416 (68%), Gaps = 23/416 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 109 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 168
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 169 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 228
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 229 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 288
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQTL DCE LS ++ +
Sbjct: 289 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 348
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 299
+ +D +NK EF M+DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 349 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQK 407
Query: 300 ---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 338
I+++ +E E+K + ILGL+PP + +E L+QLKDKA
Sbjct: 408 KKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKA 467
Query: 339 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
LKRA LTEE + + IE+R AARKNK F SDQIR L KGIALMD T+WRPC
Sbjct: 468 LKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPC 523
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/416 (56%), Positives = 287/416 (68%), Gaps = 23/416 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQTL DCE LS ++ +
Sbjct: 181 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISV 240
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 299
+ +D +NK EF M+DDL T+ +L G F D LK INS+LN KK Q K +Q
Sbjct: 241 PVPVEEQDMVNKHHSEFLESMADDLRTTDVLDG-FTDLLKAINSNLNDFKKLQQKLEQQK 299
Query: 300 ---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 338
I+++ +E E+K + ILGL+PP + +E L+QLKDKA
Sbjct: 300 KKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKA 359
Query: 339 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
LKRA LTEE + + IE+R AARKNK F SDQIR L KGIALMD T+WRPC
Sbjct: 360 LKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPTGTVWRPC 415
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/416 (56%), Positives = 288/416 (69%), Gaps = 22/416 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++
Sbjct: 131 MTELQCLPPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKF 190
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ N+AG RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 191 DQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHL 250
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR I
Sbjct: 251 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDI 310
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
T YHPLALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE L+ ++E G +
Sbjct: 311 TALYHPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISL 370
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ ++ I+K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 371 SVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQK 430
Query: 301 ----------------------LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 338
I++L +E E+K L ILGL+P + +EVL+QLKDKA
Sbjct: 431 KKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKA 490
Query: 339 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
LKRA LTEE + + IE+R ARKNK F SD IR +L KGIALMD T+WRPC
Sbjct: 491 LKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWRPC 546
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/428 (54%), Positives = 289/428 (67%), Gaps = 34/428 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT +PRV++H+E I ++IT+I+ ND AY +EGDV+F+VE P Y LSG++
Sbjct: 131 MTELQCLPPTCEPRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKF 190
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ N+AG RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 191 DQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHL 250
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR-- 178
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KM+KS NFFTIR
Sbjct: 251 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDL 310
Query: 179 ----------QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV 228
QIT YHPLALR FL+ HYRS +N+S L+ ASD V+YI+QTL DCE
Sbjct: 311 SLEVITVVFVQITALYHPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEE 370
Query: 229 ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 288
L+ ++E G + + ++ I+K EF MS+DL T+ +L F + LK INSSLN
Sbjct: 371 VLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLND 430
Query: 289 LKKKQPKQQQLS----------------------LIESLRKIENEVKEVLRILGLLPPGA 326
LKK Q K +Q I++L +E E+K L ILGL+P +
Sbjct: 431 LKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSS 490
Query: 327 YSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMG 386
+EVL+QLKDKALKRA LTEE + + IE+R ARKNK F SD IR +L KGIALMD
Sbjct: 491 LAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEP 550
Query: 387 KETIWRPC 394
T+WRPC
Sbjct: 551 SGTVWRPC 558
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/417 (55%), Positives = 287/417 (68%), Gaps = 23/417 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV++H+E I ++IT+II N Y +EGDV+F+V+ P Y LSG++L
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ NRAGERVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDI 180
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHP+ALR+FLI HYRS +N+S ++ ASD V+YIY+TL DCE LS + E G +
Sbjct: 181 ISLYHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSKYHEEGISV 240
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 298
+ ++ +N+ R F MSDDL T+ +L G D LK INS++N LKK Q K +Q
Sbjct: 241 PVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLKKLQQKLEQ 300
Query: 299 L---------------------SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDK 337
I+ L +E E+K+ L +LGL+PP + SEVL QLKDK
Sbjct: 301 QQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSEVLNQLKDK 360
Query: 338 ALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ALKRA LTEE + + IE+R ARKNK F SD+IR L GI+LMD T WRPC
Sbjct: 361 ALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPTGTSWRPC 417
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/416 (55%), Positives = 286/416 (68%), Gaps = 23/416 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+A+LQCLPPT++PRV++H+E I +IT+II N AYVV+GDV+F+V+ P Y LSG+ L
Sbjct: 146 VAELQCLPPTHEPRVTEHIENIIKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRIL 205
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAG RVAVD+RKRNPADFALWKAAK GEPSW+SPWG GRPGWHIECSAMSAHYL
Sbjct: 206 DHNRAGSRVAVDTRKRNPADFALWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHV 265
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG + +++KMSKS+ NFFTIR I
Sbjct: 266 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDI 325
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHPLALR FL+ HY+S N+S L+ ASD V+YI+QTL DC+ +S +E +A
Sbjct: 326 ITLYHPLALRFFLMRTHYKSDANHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSA 385
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + ++ F MSDDL T+ +L G F + LK IN +LN LKK Q K +Q
Sbjct: 386 PVPAEEQKLVDDHHKAFLESMSDDLRTTDVLDG-FMELLKAINGNLNDLKKLQQKLEQQK 444
Query: 301 L----------------------IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA 338
I++L + E+K L ILGL+PP +EVL+QLK+KA
Sbjct: 445 KKQQQQKKQQQKQQRPQKQPEDHIQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKA 504
Query: 339 LKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
LKRA LTEE + + IE R AAR NK F SDQIR +L KGIALMD T+WRPC
Sbjct: 505 LKRAGLTEESLSEQIEHRIAARNNKQFEVSDQIRKELASKGIALMDEPTGTVWRPC 560
>gi|15228880|ref|NP_191189.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/398 (58%), Positives = 287/398 (72%), Gaps = 52/398 (13%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCL PT+QPRVSDHMEQI MI +II N C Y V GDVFF+V+KSP+YG+LSGQRL
Sbjct: 105 MAALQCLLPTHQPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ +AG+RVAVDSRKRNPADFAL KAAK+GEPSW+SPWG GRPGWHIE
Sbjct: 165 DHTQAGKRVAVDSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIE------------ 212
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQ+CAAC+DS V+YW+HNGHVTNNN KM KSL NFFTIRQI
Sbjct: 213 FDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQI 272
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH---- 236
YHPLALRHFL+SA YRSPLNYSV QL+S+SDA++ +LSP++E
Sbjct: 273 AANYHPLALRHFLMSAQYRSPLNYSVSQLESSSDALY-----------SLSPYREEMSGD 321
Query: 237 -GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
GKT + + A++ I K++ +ALKFIN S++ LKK Q K
Sbjct: 322 VGKTQQ-SAEAKEMIKKVK----------------------NALKFINVSISKLKKMQ-K 357
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+Q++SL+ SL ++E V+EVL +LGLL +Y E+L+ +K KAL RA + EE+VLQ IEE
Sbjct: 358 KQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGELLKDMKQKALTRAGMGEEEVLQRIEE 417
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 393
R ARK+KDF +SD+IR L KGI L D+ +T+WRP
Sbjct: 418 RNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTVWRP 455
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/415 (55%), Positives = 282/415 (67%), Gaps = 23/415 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV++H+E I D+I +II ND AYV +GDVFF+++ P Y LSG+ L
Sbjct: 147 MAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNL 205
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NR G RVAVD RKRN DFALWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL
Sbjct: 206 DDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHV 265
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA DS V WMHNG V ++EKMSKSL NFF+IR+I
Sbjct: 266 FDIHGGGKDLIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREI 325
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHPLALR FL+ HY+S +N+S L+ ASD V+YIYQTL DC+ LS ++E +
Sbjct: 326 ITLYHPLALRFFLMRTHYKSDVNHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISV 385
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + +++ F MSDDL T+ +L G F LK INS+LN KK Q K +Q
Sbjct: 386 PVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDG-FMGLLKAINSNLNDFKKLQQKLEQQK 444
Query: 301 L---------------------IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKAL 339
I++L +E E+K L ILGL+PP + EVL++LK+KAL
Sbjct: 445 KKQQQKKQQQKQQRPQKQPEDHIQALISLEAEIKNKLSILGLMPPSSLVEVLKELKEKAL 504
Query: 340 KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
KRA LTEE + + IE+R AAR NK F SDQIR L KGIALMD T+WRPC
Sbjct: 505 KRAGLTEETLREQIEQRVAARNNKQFDVSDQIRKQLASKGIALMDEPTGTVWRPC 559
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/422 (54%), Positives = 284/422 (67%), Gaps = 28/422 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT +PRV++H+E I +ITQI+ N AY +EGDV+F+VE P Y LSG++
Sbjct: 132 MTELQCLPPTCEPRVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKF 191
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ N+AG RVA D+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 192 DQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 251
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA DS V WMHNG V +++KM+KS NFFTIR I
Sbjct: 252 FDIHGGGKDLIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDI 311
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHP+ALR FL+ HYRS +N+S L+ ASD V+YIYQTL DCE L+ ++E G +
Sbjct: 312 IALYHPMALRFFLMRTHYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSL 371
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ ++ I K EF MS+DL T+ +L F + LK INSSLN LKK Q K +Q
Sbjct: 372 PVPSEEQNLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQK 431
Query: 301 ----------------------------LIESLRKIENEVKEVLRILGLLPPGAYSEVLQ 332
I++L +E E+K L ILGL+P + +EVL+
Sbjct: 432 KKQQQQKKQQQQKQQQQKQQQLQKQPEDYIQALIALETELKNKLSILGLMPSSSLAEVLK 491
Query: 333 QLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
QLKDK+LKRA LTEE + + IE+R ARKNK F SD IR +L KGIALMD T+WR
Sbjct: 492 QLKDKSLKRAGLTEEQLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDEPSGTVWR 551
Query: 393 PC 394
PC
Sbjct: 552 PC 553
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/396 (53%), Positives = 281/396 (70%), Gaps = 2/396 (0%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT++PRV+ H+EQI D+IT+I++N AY +EGDV+F+V+ P+Y LSG+++
Sbjct: 120 MYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKV 179
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ NR G RVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL +
Sbjct: 180 DQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNI 239
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V + +KM+K+ NFFTIR I
Sbjct: 240 FDIHGGGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDI 299
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHP+ALR FL+ HYRS +N+S L AS ++YIYQTL D E +S + EH
Sbjct: 300 ISLYHPMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLEN 359
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 298
I + I + F +MSDDL+T+ L Q L+ + +++Q +++
Sbjct: 360 SIPADDQKLIEENHSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKP 419
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
I++L ++NEV + L ILGL+P + +E L+QLKDKALKRA +T E + Q+IE+R
Sbjct: 420 EDYIQALVALQNEVTDKLSILGLMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTL 479
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARKNKDF++SD+IR +L+ GIALMD T+WRP
Sbjct: 480 ARKNKDFAESDRIRTELSALGIALMDEPTGTLWRPS 515
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/403 (55%), Positives = 274/403 (67%), Gaps = 13/403 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV++H+E I D+I +II ND AYV +GDVFF+++ P Y LSG+ L
Sbjct: 147 MAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKNDKAYV-DGDVFFSIDSFPEYNSLSGRNL 205
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NR G RVAVD RKRN DFALWKAAK GEP W+SPWG GRPGWHIECSAMSAHYL
Sbjct: 206 DDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAHYLGHV 265
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA DS V WMHNG V ++EKMSKSL NFF+IR+I
Sbjct: 266 FDIHGGGKDLIFPHHENELAQSRAAYPDSEVKCWMHNGFVNKDDEKMSKSLNNFFSIREI 325
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHPLALR FL+ HY+S +N+S L+ ASD V+YIYQTL DC+ LS ++E +
Sbjct: 326 ITLYHPLALRFFLMRTHYKSDVNHSDKALEIASDRVYYIYQTLHDCDEVLSLYREENISV 385
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + +++ F MSDDL T+ +L G K++Q KQQQ
Sbjct: 386 PVPDEEQKLVDEHHTAFLDSMSDDLRTTDVLDGFMGLLKLQQKLEQQKKKQQQKKQQQKQ 445
Query: 301 L---------IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
I++L +E E+K L ILGL+PP S ++++LK+KALKRA LTEE + +
Sbjct: 446 QRPQKQPEDHIQALISLEAEIKNKLSILGLMPP---SSLVEELKEKALKRAGLTEETLRE 502
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
IE+R AAR NK F SDQIR L KGIALMD T+WRPC
Sbjct: 503 QIEQRVAARNNKQFDVSDQIRKQLASKGIALMDEPTGTVWRPC 545
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/415 (53%), Positives = 288/415 (69%), Gaps = 23/415 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEK-----SPNYGR 54
MA L+CL P+ +PRVS +++QI MI+QI+ N YV++ GDV+F+++K +YGR
Sbjct: 93 MASLRCLAPSLEPRVSRNIDQIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDSYGR 152
Query: 55 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 114
LSG++L++NRAGERVAVD RK NP DF LWKA GEPSW+SPWG GRPGWHIECSAMS
Sbjct: 153 LSGRKLDDNRAGERVAVDDRKLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSG 210
Query: 115 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 174
L S FDIHGGG+DLIFPHHENEI QS AAC +SNV+YWMHNG VT ++EKMSKSLGNF
Sbjct: 211 ATLGSSFDIHGGGMDLIFPHHENEIVQSRAACHESNVTYWMHNGFVTVDSEKMSKSLGNF 270
Query: 175 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 234
FTIR++ E YHPLALR FL+ HYRSP+NYS QL +AS +FY+YQTL D + + Q
Sbjct: 271 FTIREVFELYHPLALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQ 330
Query: 235 EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+ K+ ++ A + LR + ++DDLNT + GA + LK +N L+ K ++
Sbjct: 331 KEEKSYVVSQKAAEIAKALRLSLRSSLADDLNTP-VTIGALSEPLKLMNELLHSKKGRKD 389
Query: 295 KQQQLSLIESLRKIENEVKEVLRILG---------LLPPGAYSEVLQQLKDKALKRAELT 345
K S SL + EV++ L +LG L+ S+VL++L+ KALKRA LT
Sbjct: 390 K----SRYSSLDLLRLEVEQALEVLGFSVADYSQALITQLFLSQVLEELRSKALKRAGLT 445
Query: 346 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD-MGKETIWRPCVLVEQ 399
E+++L I ERAAAR +KDF KSD+IR L+ GI+LMD G ET+WRP V E+
Sbjct: 446 EDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISLMDGGGDETLWRPSVTSEE 500
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/396 (53%), Positives = 279/396 (70%), Gaps = 5/396 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT++PRV+ H+EQI D+IT+I++N AY +EGDV+F+V+ P+Y LSG+++
Sbjct: 161 MYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKV 220
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ NR G RVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL +
Sbjct: 221 DQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNI 280
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V + +KM+K+ NFFTIR I
Sbjct: 281 FDIHGGGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDI 340
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHP+ALR FL+ HYRS +N+S L AS ++YIYQTL D E +S + EH
Sbjct: 341 ISLYHPMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLEN 400
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 298
I + I + R F +MSDDL+T+ L Q L+ + +++Q +++
Sbjct: 401 SIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKP 460
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
I++L ++NEV + L ILGL+P S + +QLKDKALKRA +T E + Q+IE+R
Sbjct: 461 EDYIQALVALQNEVTDKLSILGLMP---MSSLAEQLKDKALKRAGMTAEQLQQMIEQRTL 517
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARKNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 518 ARKNKDFAESDRIRTELSALGIALMGEPTGTLWRPS 553
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQII 30
M +LQCLPPT++PRV+ H+EQI D+IT+II
Sbjct: 107 MYELQCLPPTHEPRVTKHIEQIIDLITKII 136
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/396 (53%), Positives = 279/396 (70%), Gaps = 5/396 (1%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +LQCLPPT++PRV+ H+EQI D+IT+I++N AY +EGDV+F+V+ P+Y LSG+++
Sbjct: 120 MYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKV 179
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ NR G RVAVD+RKRNPADFALWK+AK GEPSW+SPWG GRPGWHIECSAMSAHYL +
Sbjct: 180 DQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNI 239
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V + +KM+K+ NFFTIR I
Sbjct: 240 FDIHGGGKDLIFPHHENELAQSQAAYPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDI 299
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
YHP+ALR FL+ HYRS +N+S L AS ++YIYQTL D E +S + EH
Sbjct: 300 ISLYHPMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLEN 359
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTG--AFQDALKFINSSLNMLKKKQPKQQQ 298
I + I + R F +MSDDL+T+ L Q L+ + +++Q +++
Sbjct: 360 SIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKP 419
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
I++L ++NEV + L ILGL+P S + +QLKDKALKRA +T E + Q+IE+R
Sbjct: 420 EDYIQALVALQNEVTDKLSILGLMP---MSSLAEQLKDKALKRAGMTAEQLQQMIEQRTL 476
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARKNKDF++SD+IR +L+ GIALM T+WRP
Sbjct: 477 ARKNKDFAESDRIRTELSALGIALMGEPTGTLWRPS 512
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 283/406 (69%), Gaps = 15/406 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKS----PN-YGR 54
MA L+CL P+ +PRVS +++QI MI+QI+ N YV++ GDV+F+++K P+ YGR
Sbjct: 93 MASLRCLAPSLEPRVSRNIDQIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDCYGR 152
Query: 55 LSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSA 114
LSG++L++NRAGERVAVD RK NP DF LWKA GEPSW+SPWG GRPGWHIECSAMS
Sbjct: 153 LSGRKLDDNRAGERVAVDDRKLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSG 210
Query: 115 HYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNF 174
L S FDIHGGG+DLIFPHHENEI QS AAC +SN++YWMHNG VT ++EKMSKSLGNF
Sbjct: 211 ATLGSSFDIHGGGMDLIFPHHENEIVQSRAACHESNITYWMHNGFVTVDSEKMSKSLGNF 270
Query: 175 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ 234
FTIR++ E YHPLALR FL+ HYRSP+NYS QL +AS +FY+YQTL D + + Q
Sbjct: 271 FTIREVFELYHPLALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQ 330
Query: 235 EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+ K+ ++ A + LR + ++DDLNT + GA + LK +N L+ + ++
Sbjct: 331 KEEKSYVVSQKAAENAKALRLSLRSSLADDLNTP-VTIGALSEPLKLMNELLHSKRGRKD 389
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
K S SL + EV++ L +LG YS+ L KALKRA LTE+++L I
Sbjct: 390 K----SRYSSLDLLRLEVEQALEVLG-FSVADYSQALFLPTCKALKRAGLTEDELLLQIH 444
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMD-MGKETIWRPCVLVEQ 399
ERAAAR +KDF KSD+IR L+ GI+LMD G ET+WRP V E+
Sbjct: 445 ERAAARASKDFGKSDEIRDKLSSLGISLMDGGGDETLWRPSVTSEE 490
>gi|413919531|gb|AFW59463.1| hypothetical protein ZEAMMB73_732444 [Zea mays]
Length = 397
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/387 (55%), Positives = 263/387 (67%), Gaps = 22/387 (5%)
Query: 30 INNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKA 89
+ ND AY +EGDV+F+VE P Y LSG++ + N+AG RVA D+RKRNPADFALWKAAK
Sbjct: 1 MENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKE 60
Query: 90 GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDS 149
GEP WDSPWG GRPGWHIECSAMSAHYL FDIHGGG DLIFPHHENE+AQS AA +S
Sbjct: 61 GEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPES 120
Query: 150 NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQL 209
V WMHNG V +++KM+KS NFFTIR IT YHPLALR FL+ HYRS +N+S L
Sbjct: 121 EVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITALYHPLALRFFLMRTHYRSDVNHSDQAL 180
Query: 210 DSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSH 269
+ ASD V+YI+QTL DCE L+ ++E G + + ++ I+K EF MS+DL T+
Sbjct: 181 EIASDRVYYIFQTLYDCEEVLATYREEGISLSVPFEEQNLIDKHHSEFLKYMSNDLKTTD 240
Query: 270 ILTGAFQDALKFINSSLNMLKKKQPKQQQLS----------------------LIESLRK 307
+L F + LK INSSLN LKK Q K +Q I++L
Sbjct: 241 VLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQQQKKQQQKQQQLQKQPEHYIQALIA 300
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+E E+K L ILGL+P + +EVL+QLKDKALKRA LTEE + + IE+R ARKNK F
Sbjct: 301 LEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRAGLTEEKLQEQIEQRNVARKNKQFEI 360
Query: 368 SDQIRADLTRKGIALMDMGKETIWRPC 394
SD IR +L KGIALMD T+WRPC
Sbjct: 361 SDGIRKNLATKGIALMDEPSGTVWRPC 387
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/426 (49%), Positives = 278/426 (65%), Gaps = 37/426 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGD-VFFAVEKSPNYGRLSGQR 59
M LQCLPPT++PRV+DH++QI D+IT+I D AYV+EG+ V+F+V+ P Y LSG++
Sbjct: 104 MVQLQCLPPTHEPRVTDHIKQIIDLITKIKGKDKAYVIEGEGVYFSVDNFPEYLSLSGRK 163
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE+N G RVA+D+RKRNPADFALWK+AK GEP W+SPWG GRPGWHIECSAMS HYL
Sbjct: 164 LEHNLPGSRVAIDTRKRNPADFALWKSAKDGEPFWESPWGRGRPGWHIECSAMSEHYLGQ 223
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSY--WMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DLIFPHHENE+AQS AA S V WMHNG V NN +KM+K NFFTI
Sbjct: 224 LFDIHGGGKDLIFPHHENELAQSRAANSKSEVKLECWMHNGFVNNNGQKMAKPDKNFFTI 283
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
I YHP+ALR FL+ HYRS +N S L+ AS V+YIYQTLQD + +S + +
Sbjct: 284 -DIISLYHPMALRLFLMRTHYRSDVNQSDTALEFASGRVYYIYQTLQDSQEVISLYCDDK 342
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALK---FINSSLNMLKKKQP 294
+ + ++K +EF M++DL+T GA + +K IN++L+ LKK Q
Sbjct: 343 LDFPVPTGDQAVVDKNHEEFLKHMANDLHTK----GALDELMKPIXAINNNLSDLKKLQQ 398
Query: 295 K--------------------------QQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 328
K +Q +++L + EV L ILGL+P + +
Sbjct: 399 KLEQEKKKQAVKKQQQQQTEEGKQQAQKQTGHYVQALVALHGEVTSKLSILGLMPXPSLA 458
Query: 329 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 388
E +++LKDKALKRA ++EE++ Q+I +R RKNKDF++SD+IR L+ +GIALMD
Sbjct: 459 EAVKELKDKALKRAGMSEEELHQVIXQRTVTRKNKDFAESDRIRTVLSARGIALMDEPTG 518
Query: 389 TIWRPC 394
T+W+P
Sbjct: 519 TVWKPA 524
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 370 bits (949), Expect = e-99, Method: Compositional matrix adjust.
Identities = 188/408 (46%), Positives = 255/408 (62%), Gaps = 17/408 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CL PT +PR ++ ++ I I ++I AY GDV+F+V+ P YG LSG++
Sbjct: 260 MTALGCLRPTLEPRATECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQ 319
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAVD RK+NPADFALWK AK GEP+W SPWG GRPGWHIECSAM L
Sbjct: 320 DDNRAGERVAVDERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPT 379
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAAC-----QDSN--VSYWMHNGHVTNNNEKMSKSLGN 173
DIHGGG DL+FPHHENE+AQS AAC D N V YW+HNG V ++EKMSKSLGN
Sbjct: 380 IDIHGGGQDLVFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGN 439
Query: 174 FFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF 233
FFTIR++ ++YHP LR L+ AHYR+P+NY+ L+ ASD V+Y+YQTLQD +
Sbjct: 440 FFTIREVLDKYHPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIRDA 499
Query: 234 QEHGKTARINPAAEDCI---NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
+ P D + N+ + ++DDLNT ++ L S+N
Sbjct: 500 AVEEDATKPVPMVADALKLANETEKQVLESLNDDLNTPAVMA-----TLSAPLKSMNDFM 554
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ ++ + + +L+ + ++ VL +G +P G L +L+ KAL RA LTE+ +L
Sbjct: 555 TTKAGKKAVGRVRALQALLTSIEGVLEAVG-MPRGEEDVFLGELRAKALHRAGLTEDALL 613
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVE 398
IEER AR KDF++SD++R +L+ +GI LMD G WRP +V+
Sbjct: 614 AKIEERKKARDAKDFAESDRLRDELSARGIGLMD-GAAVAWRPVPVVD 660
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 259/409 (63%), Gaps = 19/409 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L CL PT +PR ++ ++ I I ++I AY EGDV+F+V+ P YG LSG+
Sbjct: 95 MAALGCLRPTLEPRATECVDDIIAFIERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQ 154
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD RK+NPADFALWK AK GEP+W SPWG GRPGWHIECSAM L
Sbjct: 155 EDNRAGERVAVDGRKKNPADFALWKTAKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPT 214
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAAC-----QDSN--VSYWMHNGHVTNNNEKMSKSLGN 173
DIHGGG DL+FPHHENE+AQS AAC D N V YW+HNG V ++EKMSKSLGN
Sbjct: 215 IDIHGGGQDLVFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGN 274
Query: 174 FFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF 233
FFTIR++ ++YHP LR L+ AHYR+P+NY+ L+ ASD V+Y+YQT+ D L
Sbjct: 275 FFTIREVLDKYHPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTVHDVRAILRDA 334
Query: 234 QEHGKTARINPAAEDCINKLRDEFHARMS----DDLNTSHILTGAFQDALKFINSSLNML 289
+ P D + KL E ++S DD+NT ++ L S+N
Sbjct: 335 AAEEPAKKPVPLVADAL-KLASEAEKQVSEALNDDMNTPGVIA-----TLSAPLKSMNDF 388
Query: 290 KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDV 349
+ ++ + + +L+ + + V+ ++ +G +P + +L +L+ +AL RA LTE+D+
Sbjct: 389 MTTKAGKKAVGRVGALQSLLSTVEGLMEAVG-MPKDEENVILAELRARALHRAGLTEDDL 447
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVE 398
L IEER AR KDF++SD++R +L+ +G+ LMD G WRP +++
Sbjct: 448 LAKIEERNKARDAKDFAESDRLRDELSARGVGLMD-GSAVPWRPVPVID 495
>gi|384251815|gb|EIE25292.1| tRNA synthetase class I (C) family protein [Coccomyxa
subellipsoidea C-169]
Length = 536
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/405 (47%), Positives = 251/405 (61%), Gaps = 16/405 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CL PT +P+ +D + Q+ DMI +I+ Y +G V+F+VE P YGRLSG+ L
Sbjct: 132 MDALNCLAPTSEPKATDFISQMVDMIGRIVKAGHGYEADGSVWFSVESVPGYGRLSGRSL 191
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++NRAGERVAV++ KRNPADF LWKAAK GEP WDSPWGPGRPGWHIECSAM +
Sbjct: 192 DDNRAGERVAVNTTKRNPADFVLWKAAKVGEPKWDSPWGPGRPGWHIECSAMIRELMGPI 251
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA---CQDSN-------VSYWMHNGHVTNNNEKMSKS 170
DIHGGG DLI PHH+NE+ QS AA C N V +WMH G V ++EKMSKS
Sbjct: 252 IDIHGGGRDLIHPHHDNELVQSQAAACECDRENMLDHRDFVRWWMHLGFVNVDSEKMSKS 311
Query: 171 LGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL 230
LGNFFTIR + + YHP+ALR FLI+ YR +NY+ L ASD ++YIYQTLQD E AL
Sbjct: 312 LGNFFTIRDVLQMYHPMALRWFLINTQYRQAINYTERSLQEASDRLYYIYQTLQDAEAAL 371
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
+ G+ + KL A + DDLNT A + LK +N L+ K
Sbjct: 372 TAAAAAGEQVSVATEQHSNGTKLLKSVEASLCDDLNTPQAFA-ALSEPLKTMNDLLHTKK 430
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
K+ + ++++ ++ + VL +LG L G VL +++ +AL RA L E+DV
Sbjct: 431 GKKAGGR----LQTIATLQQALNSVLELLG-LGAGDIGAVLVEMRQRALHRAGLKEQDVE 485
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
IE RA AR KD++ +D+ RA L +GI +MD + T+WRP +
Sbjct: 486 LSIERRAVARAAKDYASADKERAFLAERGIMIMDGSEGTLWRPGI 530
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/414 (47%), Positives = 266/414 (64%), Gaps = 27/414 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L CL PT +PR +DH++ I M ++I AY +GDV+F+V+ P YG LSG++ E+N
Sbjct: 113 LGCLRPTIEPRATDHIKDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDN 172
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
RAGERVAVD RK+NPADFALWKAAK GEP+WDSPWG GRPGWHIECSAM L DI
Sbjct: 173 RAGERVAVDDRKKNPADFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDI 232
Query: 124 HGGGIDLIFPHHENEIAQSCAAC----------QDSNVSYWMHNGHVTNNNEKMSKSLGN 173
HGGG DL+FPHHENE+AQS A+C ++ V YW+HNG V ++EKMSKSLGN
Sbjct: 233 HGGGQDLVFPHHENELAQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGN 292
Query: 174 FFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF 233
FFTIR++TE+YHP ALR L+ HYR+P+NY+ L+ ASD ++Y+YQTL D VAL+
Sbjct: 293 FFTIREVTEKYHPFALRWMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTEA 352
Query: 234 QEHGKTARI--------NPAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFIN 283
+ A + AAE + + + + ++DDLNT + + LK +N
Sbjct: 353 EASATDAEVKGKPKPPTGVAAEGIELAVETKAAVASALTDDLNTP-LAMASLSSPLKTLN 411
Query: 284 SSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE 343
++ K K+ + + +LR + V+E L +G LP +L++L+ L RA
Sbjct: 412 DLVSTKKGKKAVGRNV----ALRDLVKTVEETLEAVG-LPHEGGEGLLEELRLLTLARAG 466
Query: 344 LTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLV 397
LT+ DV + + +RA AR KDF++SD+IR +L KG+ALMD G + +WRP +V
Sbjct: 467 LTQADVDEAVAKRAEARAAKDFAESDRIRDELGAKGVALMDGGSQ-VWRPATVV 519
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/420 (46%), Positives = 260/420 (61%), Gaps = 30/420 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CL P +PR + H+ I D+IT++I + AY V+GDV+F+V+ YG LSG+
Sbjct: 245 MEALGCLRPDLEPRATQHVGDIIDLITRLIEKNHAYAVDGDVYFSVDSLSKYGSLSGRNQ 304
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERV VD RK+NPADFALWK AK EP W+SPWG GRPGWHIECSAM L
Sbjct: 305 EDNRAGERVVVDGRKKNPADFALWKTAKPNEPVWESPWGNGRPGWHIECSAMIEKLLGPV 364
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAAC-------QDSN-VSYWMHNGHVTNNNEKMSKSLG 172
DIHGGG DL+FPHHENE+AQS AAC +D V YW+HNG V ++EKMSKSLG
Sbjct: 365 IDIHGGGQDLVFPHHENELAQSSAACDCEIHKSEDKKFVRYWVHNGFVKVDSEKMSKSLG 424
Query: 173 NFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP 232
NFFTIR++ RYHP+ LR L+ AHYR+P+NY+ L+ +SD ++YIYQTL D AL
Sbjct: 425 NFFTIREVLARYHPMVLRFMLLGAHYRAPINYTQKALEESSDRLYYIYQTLLDARAALEL 484
Query: 233 FQEHGKT------ARINPAAEDCINKLRDEFHARMS----DDLNTSHILTGAFQDALKFI 282
E + +++P A D KL +E ++ DDLNT + + LK
Sbjct: 485 KDEEFRAELENSKLKLSPLAADA-KKLAEETKVSVAQALYDDLNTP-LAIASLSGPLKTT 542
Query: 283 NSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAY---SEVLQQLKDKAL 339
N L + ++ + + +L + +E++ L ILGL P A + +L +LK AL
Sbjct: 543 NDFLTT----KAGKKAVGRLSALSSLVSELENTLSILGL--PTAVDKSTSILAELKALAL 596
Query: 340 KRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI-WRPCVLVE 398
KRA L E+D+ L+ +RA AR K+F +SD++R +L KGI LMD G WRP V E
Sbjct: 597 KRAGLEEKDLEALMAQRANARAAKNFEESDRLREELASKGIGLMDGGGGDDAWRPIVPAE 656
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/398 (47%), Positives = 247/398 (62%), Gaps = 15/398 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT +P+ +DHM I +I +I AY +GDV++AVE P+Y RLSG+ L
Sbjct: 101 MARLGLAKPTVEPKATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV VD RKRNP DFALWK +K GEPSWDSPWG GRPGWHIECSAMS YL
Sbjct: 161 EDMLAGARVEVDDRKRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA V YWMHNG V N+EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAANGCQFVRYWMHNGFVNINSEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEH 236
E+Y P LR F++SAHYRSP+++S L+ A + IY L + A+ P Q
Sbjct: 281 LEQYDPETLRFFILSAHYRSPIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPV 340
Query: 237 GKTARINPAAEDCINKLR---DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
+ A + PA + KL+ F M DD NT+ L G +A++ N + +
Sbjct: 341 -EGAPLPPAGAELHEKLQSLISRFREAMDDDFNTAQAL-GVLFEAVRATNRFMAESGDQT 398
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
P L+L+ +R++ E +VL + P A+ E ++Q K + E++ +++ QLI
Sbjct: 399 PA--TLALLGQVRRLFAETGDVLGLF-TSQPAAWLESIKQAKSDQM---EISPQEIEQLI 452
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ERAAAR N+DF + D+IR L +KGI L+D + T W
Sbjct: 453 AERAAARTNRDFKRGDEIRDLLLQKGIQLLDSPQGTTW 490
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 189/416 (45%), Positives = 259/416 (62%), Gaps = 47/416 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M+ L CLPPT +PR + H++ I + ++ AY EG DV+F+V+ P YG+LSG++
Sbjct: 95 MSSLGCLPPTMEPRATRHVDDILRVTEALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRK 154
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAM-SAHYLS 118
LE+NRAGERVA+D RK+NPADFALWKA+K GEPSW SPWG GRPGWHIECSAM A +
Sbjct: 155 LEDNRAGERVAIDERKKNPADFALWKASKPGEPSWASPWGEGRPGWHIECSAMIDATFGG 214
Query: 119 SKFDIHGGGIDLIFPHHENEIAQS---CAACQDSN--------VSYWMHNGHVTNNNEKM 167
DIHGGG DL+FPHHENE+AQS C C D+ V YW+HNG V ++EKM
Sbjct: 215 KSIDIHGGGQDLVFPHHENELAQSTAFCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKM 274
Query: 168 SKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE 227
SKSLGNFFTIR++T +Y ALR L+ HYR+ +NY+ L+ ASD ++Y+YQTL +
Sbjct: 275 SKSLGNFFTIREVTAKYDATALRWMLLGTHYRAAINYTQRALEEASDRLYYLYQTLSEA- 333
Query: 228 VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN 287
+ +TA A +SDDLNT + + LK +N ++
Sbjct: 334 ------SDETETA----------------VGAALSDDLNTP-LAIASLSSPLKLLNDFVS 370
Query: 288 MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS---EVLQQLKDKALKRAEL 344
K K+ + + I +++ + V E L +GL P A + +VL++L+ L RA L
Sbjct: 371 TKKGKKAQGR----IAAMKALVRAVTETLDAVGL--PSAKADAVDVLERLRALTLTRAGL 424
Query: 345 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
+ EDV + R AAR+ KDF++SD+IR +L KG+ALMD G + +WRP +V +E
Sbjct: 425 SREDVDAAVAARKAAREAKDFAESDRIRDELGAKGVALMDGGSQ-VWRPSPVVAEE 479
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/395 (45%), Positives = 250/395 (63%), Gaps = 12/395 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ L PTY+P+ ++H+ QI +I +I AYV +GDV+F+VEK P YG+LSG+ L
Sbjct: 104 MKALKVLRPTYEPKATEHIPQIIALIETLIKKGFAYVADGDVYFSVEKFPEYGKLSGRNL 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E +AG R+AV +KR+P DFALWKA K GEPSWDSPWG GRPGWHIECSAM+ +YL
Sbjct: 164 EELKAGARIAVSEKKRHPLDFALWKAEKPGEPSWDSPWGRGRPGWHIECSAMAMYYLGET 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DLIFPHHENEIAQS AA V YW+HNG VT EKMSKSLGNF TI+Q+
Sbjct: 224 IDIHGGGLDLIFPHHENEIAQSEAATGKPFVRYWLHNGMVTVGREKMSKSLGNFVTIKQM 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
R+HP A+R FL+S HYRSPL+Y+ + A+ +Y+TL E L P E
Sbjct: 284 LSRHHPEAIRLFLLSMHYRSPLDYTEKVVSDHEKALEGLYETLYLIE-KLRPSSEKAPEN 342
Query: 241 RINPAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ A+ + I ++F + ++DDLNT+ + G+ K +N+ L + +K +
Sbjct: 343 QQKNLAKISETIKNFENDFISALADDLNTARAI-GSLFSLEKALNNLLKLCARKVA-EDH 400
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L L + + + ++ L LG+L P A+ +++ + +AL L +++ +LI+ER
Sbjct: 401 LKLAKKGKTLATKLAGSL--LGILEESPEAF---IERKRSQALLAKGLDRDEIERLIKER 455
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK K+F K+D IR DL +KGI + D T W
Sbjct: 456 EEARKAKNFEKADAIRDDLAQKGIIIRDTPWGTFW 490
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/396 (46%), Positives = 241/396 (60%), Gaps = 15/396 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L PT +P+ +DH+E I +I ++I+N AY V+GDV+FAVE P Y +LSG+ L
Sbjct: 101 MDRLGMLRPTIEPKATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AG RV VD RKRNP DFALWK +K GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 161 DDMLAGARVDVDERKRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPS 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A V YW+HNG V N+EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEGANGCQFVKYWLHNGFVNINSEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E + P LR F++ AHYRSPL+YS L A + IY+ L + AL E TA
Sbjct: 281 LELFDPETLRFFILQAHYRSPLDYSDQNLREAQAGLSRIYEALAALDQAL----EKPATA 336
Query: 241 RINPAA----EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
PA+ + + L F M DD NT+ L G D+++ +N L +
Sbjct: 337 IHLPASAAEFAEKVAGLLPRFREAMDDDFNTAQAL-GTLFDSIRTLNRLLA--EGGGSSS 393
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ +E LR E+ VL + + P S+ L + + + E++ E++ LI ER
Sbjct: 394 ASRADLEQLRAAVTEIGAVLGLFRIKP----SDWLAAREAEKARHLEISPEEIEGLIVER 449
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAARKNKDF +SD+IR L + I L+D + T W+
Sbjct: 450 AAARKNKDFKRSDEIRDYLLSRDIQLVDTPQGTAWK 485
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 180/403 (44%), Positives = 238/403 (59%), Gaps = 32/403 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A LQ LPP +PR ++ ME I M+ Q+++ AY E GD+++ V YG LSG+ L
Sbjct: 101 ASLQILPPDREPRATESMEAILAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV V+ K +P DF LWKAAK+GEP+W+SPWGPGRPGWHIECSAMS L +
Sbjct: 161 EDLRAGERVQVNEAKTDPLDFVLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA V+YWMHNG V N+EKMSKSLGNFFT+R++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEAATGGKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHP LR+F++S+HYRSPLNY+ QLD+A A+ +Y L+ G +
Sbjct: 281 LEHYHPEVLRYFILSSHYRSPLNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSW 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + + R+ M DD NT L L + +LN ++ ++ S
Sbjct: 341 EFTDGGDPFVLRFREA----MDDDFNTPEALA-----LLNEVRHALNRAREAGDTEKGQS 391
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDK-----------ALKRAELTEEDV 349
L LR + ILGLL E Q L+D A + A L+ + +
Sbjct: 392 LAVLLRSLGG-------ILGLLA----HEPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGI 440
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
QL+ +R ARKNKD++++D+IR L +GI L D T+WR
Sbjct: 441 EQLVAQRTVARKNKDWAEADRIRGILKDQGITLEDTAAGTLWR 483
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 246/396 (62%), Gaps = 18/396 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +L L P +P+ ++H++++ D+I ++++ D AY GDV++ V P YG+LSG+ +
Sbjct: 101 MDNLGTLRPDIEPKATEHIQEMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG R++++ +KRNP DFALWKA+K GEPSW+SPWGPGRPGWHIECSAMS YL
Sbjct: 161 EDMQAGARISINEQKRNPMDFALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGEN 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A + W+H+G VT +EKMSKSLGNF TI+ I
Sbjct: 221 FDIHGGGKDLIFPHHENEIAQSEGANGKPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHP LR F+ S YR+PL++S + + A A+ +Y+ L D Q+ K
Sbjct: 281 LDHYHPEILRAFIFSTQYRNPLDFSEIAMQDAETALVRLYECLHD-------IQQLAKGD 333
Query: 241 RINPA---AEDC--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
PA A+D +N + F M++D NT+ L G DA+K IN + L P
Sbjct: 334 PTLPALISAKDAAKLNSIETRFQEAMNNDFNTALAL-GVLYDAIKIINRAQRALTDT-PS 391
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ +++ + ++++ I+GLL A + LQQ K+K L ++TE ++ I++
Sbjct: 392 ALDVKMLKGSMTL---IQKLAGIVGLLQEDA-NLFLQQRKEKMLSGIDITEAEIESYIQQ 447
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R AR NKD+++SD+IR L KGI L D T W
Sbjct: 448 RLDARANKDWARSDEIRDILLEKGITLKDGADGTGW 483
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/425 (45%), Positives = 250/425 (58%), Gaps = 38/425 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L CLPP +PR ++++ + MI +II++ AY V GDVFF V P YGRLSG+
Sbjct: 174 MELLGCLPPDLEPRATEYIPHMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQ 233
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+NRAGERVAVD RKR ADFALWKAAK GEP+W+SPWGPGRPGWHIECSAM L
Sbjct: 234 EDNRAGERVAVDERKRGAADFALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEV 293
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAAC--------------------------QDSNVSYW 154
DIHGGG DL+FPHHENE+AQS AA QD V YW
Sbjct: 294 IDIHGGGRDLVFPHHENELAQSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYW 353
Query: 155 MHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASD 214
+HNG V ++EKMSKSLGNFFTIR++ +YHP ALR FL+ YR P+NY+ L+ ASD
Sbjct: 354 LHNGFVNVDSEKMSKSLGNFFTIREVVAQYHPRALRWFLVGTQYRQPINYTQRALEEASD 413
Query: 215 AVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI------NKLRDEFHARMSDDLNTS 268
VFY+YQTL D L +E + L E A ++DD+NT
Sbjct: 414 RVFYLYQTLADMGAVLDGGEEGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTP 473
Query: 269 HILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYS 328
+ AF LK N ++ K K +Q +++L + ++ L++LGL
Sbjct: 474 -LAIAAFSAPLKSANDLVHTKKGK----KQAGRLQALAECYAALETCLQLLGLWAEQP-Q 527
Query: 329 EVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 388
+VL +L+ ALKRA L E+++ IEERAAAR KD++ +D +R L GI +MD +
Sbjct: 528 DVLLELRQLALKRAGLGEDEIAAAIEERAAARAAKDYAAADVVRLRLEAAGILIMDTPQG 587
Query: 389 TIWRP 393
T W+P
Sbjct: 588 TTWKP 592
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/395 (45%), Positives = 243/395 (61%), Gaps = 22/395 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L PT +P+ ++ + QI+ +I +++ AY V+GDV F+V P YG+LSG+++
Sbjct: 101 MDALGVLRPTREPKATEFIAQIQALIAKLVEGKYAYTVDGDVMFSVASFPEYGKLSGKKV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +G RV V+ +K+NP DFALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL
Sbjct: 161 DELMSGARVDVNEKKKNPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMFYLGQH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA ++ V+YW+HNG V EKMSKSLGN IR I
Sbjct: 221 FDIHGGGADLTFPHHENEIAQSEAATGETFVNYWVHNGFVNIRAEKMSKSLGNVLNIRDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ HP ALRHFL+++HYRSPL+YS + +S A+ +Y + AL E T+
Sbjct: 281 LKTVHPEALRHFLLTSHYRSPLDYSDAFVKESSTALERLYAAM----AALDELIEARGTS 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFIN--SSLNMLKKKQPKQQQ 298
P + + + F M DD NT L F+ A + IN S N + K
Sbjct: 337 DDLPQE---LTGIEERFSEAMDDDFNTPRALAILFE-AARTINRISGTNSVPKP------ 386
Query: 299 LSLIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
E LR++++ + V R +LG+L +E L++ + ++EE + Q I ERA
Sbjct: 387 ----ELLREVKDRILHVAREVLGILREDQ-TEFLERARKAGAPELGISEELIQQYIVERA 441
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK+K+F+++D+IR +L KGI L D K TIW+
Sbjct: 442 EARKSKNFARADEIRNELASKGIVLEDTPKGTIWK 476
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/394 (44%), Positives = 239/394 (60%), Gaps = 18/394 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT+QP+ ++H+ +I ++ ++I+ AY DVF+ V++ Y +LS + L
Sbjct: 101 MARLMLRIPTFQPKATEHVPEIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG R+ VD +K +P DFALWK AK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 161 EDMQAGARIEVDDKKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQS AA V YW+HNG V N EKMSKSLGNFFTI+++
Sbjct: 221 LDIHGGGKDLIFPHHENEIAQSEAASGKPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ERY LR FL+SAHYRSP+++S L A + IY+ L + L+ +HG T
Sbjct: 281 LERYDAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATE 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
E C + + F M DD NT+ L F D ++ IN +L +S
Sbjct: 341 ESAELEEKC-SAIATRFIEAMDDDFNTAMALGHIF-DLVRSINRAL-----------PVS 387
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+E L++++ EV + LG+ P A+ LQ++KD+ E+ E++ LI ERA
Sbjct: 388 PLELLKRVKEEVARIAATLGVCDSVPAAF---LQRMKDRKTSEMEIPVEEIEALIAERAE 444
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR++K+F +SD+IR L K I L+D + T W+
Sbjct: 445 ARRSKNFKRSDEIRDLLLEKDIVLLDTPQGTTWK 478
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 239/396 (60%), Gaps = 21/396 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT QP+ ++H++ I ++ ++I N AY +GDV+FAVE +Y +LS + L
Sbjct: 101 MARLGLDLPTVQPKATEHIDHIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +AG R+A +KRNP DFALWKAAK GEPSW+SPWG GRPGWHIECSAM YL
Sbjct: 161 DEMQAGARIAPGEKKRNPMDFALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA V YW+HNG V N EKMSKSLGNFFTIR I
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAATGQPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y P +R F++SAHYRSP+++S L A + Y+ LQ L A
Sbjct: 281 LKTYDPEVVRFFILSAHYRSPIDFSDQNLKEARLGLSRFYEGLQAAAEVL---------A 331
Query: 241 RINPAAEDCIN--KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
P+ + + +L +F M DD NT+ + F+ ++N L + +++
Sbjct: 332 ECPPSDVEATDGAELTAKFREAMDDDFNTAQAIGYLFEGI-----RTMNRLMATKKFRKK 386
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L+ S+R + + E+ ++LG+ P A+ L Q + AL ++T E++ LI ER
Sbjct: 387 ADLVASVRSLYDTFLELGKVLGMFGSEPKAW---LNQQRLSALADLDITVEEIDALIAER 443
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR++KDF++SD IR +L KGI L+D T W+
Sbjct: 444 LQARQDKDFARSDAIRDELAEKGILLLDGAGGTDWK 479
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 233/392 (59%), Gaps = 39/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P+++PR + H+ I MI ++ AYV + GDV+++V YG+LSG+R+E+
Sbjct: 103 LGVARPSFEPRATAHIHDILHMIGTLLRRGFAYVGDNGDVYYSVSLFDGYGKLSGKRIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERVA D KR+P DF LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL FD
Sbjct: 163 LRAGERVAPDESKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGHHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + V+YWMHNG V N EKMSKSLGNFFT+RQ+
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEAASCEHYVNYWMHNGFVRVNEEKMSKSLGNFFTVRQVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+F++ +HYRSPLNYS L++A A+ +Y L+ ++P G+ A
Sbjct: 283 HYRPEEVRYFILGSHYRSPLNYSDEPLNNARAALNRLYTALR----GVAPLPSEGEGA-- 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
R F A M DD NT L+ F I +N L+ QP
Sbjct: 337 ---------PFRSRFDAAMQDDFNTPVALSVLFD-----IAHEVNRLRDSQP-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
E+ ++ ++E+ +LG+L P AY LQ + AE+ LIE R AR
Sbjct: 375 EAAGRLAGLLREMGGVLGILGSDPDAY---LQGGAGEGPDEAEIQ-----TLIEARLEAR 426
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ KDF+++D+IR L +G+ L D T WR
Sbjct: 427 RRKDFAEADRIRDVLKEQGVVLEDGPGGTTWR 458
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54.1|SYC_THICR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 239/390 (61%), Gaps = 40/390 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ +++M++I+ MI+ +I D AY E GDV+F V+ +YGRLSG+ +E
Sbjct: 104 LNVLRPDMEPKATEYMDEIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEE 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV ++S K++P DF LWKA+K EP+W SPWG GRPGWHIECSAMS L + FD
Sbjct: 164 LDSGSRVEINSVKKDPLDFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V ++EKMSKSLGNFFTIR++ +
Sbjct: 224 IHGGGLDLSFPHHENEIAQSECATGEHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVLK 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+FL+++HYRSP+NYS LD A +V +Y L+ L P +
Sbjct: 284 QYHPEVIRYFLLASHYRSPVNYSEENLDVAKASVGRLYSALE-----LVPADQ------- 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE +KL EF A M+DD NT + F+ L K+ KQ+ L
Sbjct: 332 ---AEPAESKLEAEFMAAMNDDFNTPQAMAVLFE------------LAKEVNKQKSPGLA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L+K+ N++ GLL A S Q D ++LT+E + LI ERA ARK
Sbjct: 377 ALLKKLANQI-------GLLEQTAESFFKSQPSD-----SDLTDEMIEALIVERAEARKA 424
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KDFS+SD+IR +L +GI L+D + T WR
Sbjct: 425 KDFSRSDEIRDELLAQGIELLDSAEGTSWR 454
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 239/392 (60%), Gaps = 18/392 (4%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
PT QP+ ++H+++I ++ +I+ D AY GDV F VEK +Y +LSG+ LE+ +AG R
Sbjct: 109 PTCQPKATEHIDEIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGAR 168
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
+ VD RKR+P DFALWK AK GEP W+SPWG GRPGWHIECSAMS YL + FDIHGGG
Sbjct: 169 IEVDERKRHPMDFALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGK 228
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS AA V+YW+HNG V N+EKMSKSLGNFFTI+++ +RY
Sbjct: 229 DLIFPHHENEIAQSEAATGKPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDRYDNEV 288
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT------ARI 242
LR FL+SAHYRSP+++S L A + IY+ L E L+ +G T + +
Sbjct: 289 LRFFLLSAHYRSPIDFSDQNLTEAEAGLERIYKALAAVEETLAA--GNGCTGAPVDASSL 346
Query: 243 NPAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
N A + +K + F M DD NT+ + F D ++ +N L+ L
Sbjct: 347 NEAEGELFDKTTSISARFGEAMDDDFNTALAMAHVF-DLVRCVNRVLSETAGASDNICSL 405
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ I+ EV ++ +LG+ S L++LK + ++ +++ +LI ER AA
Sbjct: 406 CTL-----IKAEVAKIAGVLGIFSSKPAS-FLERLKSRKAGNLDIAVDEIERLIAERTAA 459
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RK KDF +SD+IR L K I L+D + T W
Sbjct: 460 RKAKDFKRSDEIRDQLAAKNIVLLDSQQGTTW 491
>gi|404494911|ref|YP_006719017.1| cysteinyl-tRNA ligase [Geobacter metallireducens GS-15]
gi|418067565|ref|ZP_12704904.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
gi|109894903|sp|Q39ZL8.1|SYC_GEOMG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|373558563|gb|EHP84899.1| cysteinyl-tRNA synthetase [Geobacter metallireducens RCH3]
Length = 485
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 238/394 (60%), Gaps = 13/394 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT+QP+ ++H+ ++ D+I+++I AY +GDV+F VEK Y +LS + L
Sbjct: 101 MAALGLDLPTHQPKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +AG R+ V +KR+P DFALWK +K GEP W+SPWG GRPGWHIECSAMS YL
Sbjct: 161 DEMQAGARIEVGEKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA YW+HNG V N+EKMSKSLGNFFTI+++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y LR FL+SAHYRSP+++S L A + IY TL + L+ E
Sbjct: 281 LEKYDAEVLRFFLLSAHYRSPIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEE 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + + F M DD NT+ L F + S+ +L + + +
Sbjct: 341 TDRELAEKAVT-FPERFREAMDDDFNTAQALGFVFD----LVRSANRVLGEGKGGGSNRA 395
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L+ R + +++V +LG+ P A++E +LK++ +T E++ +LI ER A
Sbjct: 396 LLAEAR---DRIRKVGAVLGIFTSEPRAFAE---RLKNRKAAELPITAEEIERLIAERIA 449
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR N+DF ++D+IR L KGI L+D + T W+
Sbjct: 450 ARANRDFKRADEIRDSLAAKGIMLLDSPQGTTWK 483
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 235/380 (61%), Gaps = 24/380 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PR +DHM++I +++ +I+ AYVV+GDVFF+VE P YG+LS Q +E+ ++G R+ V+
Sbjct: 113 PRATDHMKEIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVN 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+KR+P DFALWKA K GEP+W+SPWG GRPGWHIECS MS YL + FDIH GG DLIF
Sbjct: 173 EQKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIF 232
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENE+AQ+ AA V +W+HNG++ + EKMSKSLGNF T+R ++Y PLA+R+F
Sbjct: 233 PHHENEVAQAEAATGMQFVRFWLHNGYLLIDKEKMSKSLGNFLTVRNARKKYSPLAIRYF 292
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 252
++SAHYRSP+N+S L+ A+ AV + D E AL ++ K +E I +
Sbjct: 293 MLSAHYRSPINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAFLSE--IKQ 350
Query: 253 LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEV 312
+F+ M+DD NT+ L F+ ++ IN+ L K + ++ + ++
Sbjct: 351 AETKFYEEMNDDFNTAGALGSVFE-VVRLINTYL-----KDNSSIDFKVCKAAQTFFTKI 404
Query: 313 KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIR 372
++ I+GL ++ EL ++ +IEER AARK +DF+KSD IR
Sbjct: 405 DGIMGIMGLES----------------EKEELDTSEIESMIEERTAARKARDFAKSDAIR 448
Query: 373 ADLTRKGIALMDMGKETIWR 392
L KGI L D + T W+
Sbjct: 449 DQLAEKGIILEDTPEGTKWK 468
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 241/398 (60%), Gaps = 14/398 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L L PT QP+ ++H+ +I ++ +I+ AY + GDV F VEK Y +LS + L
Sbjct: 101 MAQLGLLLPTSQPKATEHIPEIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG R+ VD RKR+P DF LWK AK GEP W+SPWG GRPGWHIECSAMS YL
Sbjct: 161 EDMQAGARIEVDERKRHPMDFVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA V YW+HNG V N+EKMSKSLGNFFTI+++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG--- 237
++Y LR FL+SAHYRSPL++S L A + IY+ L + L+ G
Sbjct: 281 LDKYDSEVLRFFLLSAHYRSPLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEE 340
Query: 238 -KTARINPAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
+ + A + +K L F M DD NT+ + G D ++ +N L+ +
Sbjct: 341 IDASSLGEAERELFDKSGSLPLRFREAMDDDFNTA-LAMGHIFDLVRCVNRVLS-----E 394
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
K++ +L +++ + ++ +LG+ S +L +LKD+ +++ E++ +LI
Sbjct: 395 AKERSNTLSALCAQVKANIGKIADVLGIFTSEPAS-LLTRLKDRKASELDISVEEIERLI 453
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ERAAARK KDF +SD+IR L K I L+D + T W
Sbjct: 454 TERAAARKAKDFKRSDEIRDFLLGKNIVLLDSAQGTSW 491
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 233/395 (58%), Gaps = 29/395 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
A L CL P P+ +D+++Q+++MI ++NN AY GDV+F VEK YGRLSG++
Sbjct: 102 FAKLGCLAPDAAPKATDYIDQMQNMIDTLVNNGTAYPANNGDVYFEVEKFAKYGRLSGRK 161
Query: 60 LENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
LE+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 162 LEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCL 221
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ FDIHGGG DL FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTI
Sbjct: 222 GNHFDIHGGGADLSFPHHENEIAQSEAATGEQYVNYWMHAGFINVDGEKMSKSLGNFFTI 281
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R + E++HP +R+F++S+HYRSP+NYS + L A + + Y + + +
Sbjct: 282 RDVIEKFHPEVVRYFIVSSHYRSPVNYSDVALKEAKNTLMRFYHSFKAYQAVYGE----- 336
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
E + F+A M DD NT + F+ +N LN K Q ++Q
Sbjct: 337 ------QMVETLDQSFVERFNAAMCDDFNTPEAIAVLFE-----LNKELNRAVKDQNQEQ 385
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+LR + N ILGL+ + + +AL +E ED LI++R
Sbjct: 386 AAVYYSTLRHLTN-------ILGLVQHNVDEFLKSDIGQEALGLSEAQIED---LIQQRK 435
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K K+F+++D+IR L +G+ L D + T+WR
Sbjct: 436 DAKKEKNFARADEIRQSLLDQGVVLEDTRQGTVWR 470
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 223/390 (57%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP+ +PR ++H++ + MI ++ AY + GDV++AV K YGRLSG+RLE+
Sbjct: 103 LGVLPPSAEPRATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERVA D KR+P DF LWKAAK GEP+WDSPWGPGRPGWHIECSAMS HYL + FD
Sbjct: 163 LRAGERVAPDEAKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + V+YWMHNG V N EKMSKSLGNFFT+R++
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEAATCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R+F++S+HYRSPLNYS LD+A + +Y L+ + +
Sbjct: 283 RYPAEVVRYFILSSHYRSPLNYSDEPLDAARAGLTRLYTALRGVQA-------------V 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+PA + R F A M DD NT + F I LN L+ + P
Sbjct: 330 DPAGQG--EGYRRRFQAAMDDDFNTPVAMAVLFD-----IARELNRLRDEDPAGAAPLAG 382
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L G + +L E + LI +R AARK
Sbjct: 383 LLRELGGMLGLLAGDPEAFLKGG--------------EAGDLDEAAIEALIAQRLAARKA 428
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KDF+++D+IR +L +G+ L D T WR
Sbjct: 429 KDFAEADRIRDELAGQGVVLEDGPGGTTWR 458
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 236/402 (58%), Gaps = 20/402 (4%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A LQ LPP +PR ++ ME I M+ Q++ AY E GD+++ V YG LSG+ L
Sbjct: 101 ASLQILPPDREPRATESMEAILAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV V+ K +P DF LWKAAK EP+W+SPWGPGRPGWHIECSAMS L
Sbjct: 161 EDLRAGERVQVNEAKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA V+YWMHNG V ++EKMSKSLGNFFT+R++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEAATGSKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E YHP LR+F++S+HYRSPLNYS QLD+A A+ +Y L+ G +
Sbjct: 281 LEHYHPEVLRYFILSSHYRSPLNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSW 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ I + R+ M DD NT L L + +LN +K ++ S
Sbjct: 341 EFVDGEDPFILRFREA----MDDDFNTPEALA-----LLNEVRHALNRARKGGDTEKGQS 391
Query: 301 LIESLRK-------IENEVKEVL---RILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
L LR + +E ++ L R + ++ A + L + ++ L+ + +
Sbjct: 392 LAVLLRALGGILGLLAHEPEQFLRDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIE 451
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
QL+ +R ARKNKD++++D+IR L +GI L D T+WR
Sbjct: 452 QLVAQRTVARKNKDWAEADRIRGILKDQGITLEDTAAGTLWR 493
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 176/223 (78%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA LQCLPPT +PRV+DH+E I ++IT+I+ N AY +EGDV+F+V+ P Y LSG++L
Sbjct: 109 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 168
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++N AG RVAVD+RKRNPADFALWKAAK GEP WDSPWG GRPGWHIECSAMSAHYL
Sbjct: 169 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 228
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA +S V WMHNG V +++KMSKS NFFTIR I
Sbjct: 229 FDIHGGGKDLIFPHHENELAQSRAAYPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 288
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTL 223
+ YHP+ALR FL+ HYR +N+S L+ ASD V+YIYQ L
Sbjct: 289 IDLYHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQVL 331
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 231/392 (58%), Gaps = 19/392 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L +PP + P+ ++ ++++ + ++I AYVV+GDV++ VEK +YG+LS + L
Sbjct: 100 MEKLNIMPPDFTPKATEFIDEMIKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ AG RV VD RK NP DFALWK +K EP W+SPWG GRPGWHIECS MSA L
Sbjct: 160 DELLAGARVEVDERKENPLDFALWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIP 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA + YW+HNG V N EKMSKSLGNFFTIR+I
Sbjct: 220 FDIHGGGKDLIFPHHENEIAQSEAAEEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + P LR FL++ HYRSP+++S L A ++ IY L D E + +
Sbjct: 280 IKEFDPEVLRFFLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLE 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N E+ + EF M DD N++ L F D +K IN LN K+ ++ L
Sbjct: 340 EANKIFEN----FKKEFETSMDDDFNSAKALAAIF-DYIKEINRLLNQKVVKETYEEILK 394
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L + +KI V +VL I+ P ++ L ++E ++++ IEER AR
Sbjct: 395 LTNNFKKI---VNQVLGIINKTPKEWFASNLP-----------ISESELIKKIEERTNAR 440
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNK+F +D+IR +L GI L+D T +R
Sbjct: 441 KNKNFELADKIRDELESLGIELLDTPTGTRYR 472
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 231/398 (58%), Gaps = 15/398 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L P +P+ +DH+++I I + + AY GDV+F V K P YG+LSG+ L
Sbjct: 99 MAALGVAPADIEPKATDHIDEIIGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSL 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AG RV V+ +K NP DFALWKA+K GEP+WDSPWGPGRPGWHIECSAMS HYL
Sbjct: 159 DDMLAGARVDVNIQKDNPFDFALWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGET 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA YW+HNG VT N EKMSKSLGNFFTIR++
Sbjct: 219 FDIHGGGADLIFPHHENEIAQSEAAHGKPLARYWLHNGMVTVNQEKMSKSLGNFFTIREV 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE----- 235
++HP +R FLI HYRSPL++S L A +A+ +Y TL + P
Sbjct: 279 LAKFHPEVVRFFLIQNHYRSPLDFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAIS 338
Query: 236 -HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+ ++ + + +R F M DD NT+ L G DA++ +N +++
Sbjct: 339 GAFSLSGLDSEEQSRLLTIRSRFLEAMDDDFNTAQAL-GVLFDAVRLLN---RIVEHNPS 394
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
+S + R+ + +L +L P +LQ L+ K + ++ +LI
Sbjct: 395 GNADMSALAWTRRELTVLGGILNLLQQDP----QTMLQNLRQKT-DALTIPPSEIERLIA 449
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RA ARK +DF+K+D IR L G+ L D + +WR
Sbjct: 450 ARAEARKQRDFTKADAIRQQLAEAGVLLEDTPQGAVWR 487
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 234/393 (59%), Gaps = 29/393 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L CL P PR +D+++Q+++MI ++N AY GDV+F VEK YGRLSG++L+
Sbjct: 104 NLGCLHPDEAPRATDYIDQMQNMIGHLVNKGAAYPSANGDVYFEVEKFAKYGRLSGRKLD 163
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ +AG ERV VD K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L +
Sbjct: 164 DMQAGASERVDVDVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGN 223
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 224 HFDIHGGGSDLLFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRD 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ E++HP +R+F++S+HYRSP+N+S L A + Y A +Q+
Sbjct: 284 VMEKFHPEVIRYFIVSSHYRSPVNFSDFALKEAKTTLSRFYH-------AFKAYQQVYAD 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ E + + F+ M DD NTS + F+ I LN K++ +Q
Sbjct: 337 LSTDVLDETFVER----FNIAMRDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQAT 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E D+ I++R A
Sbjct: 388 LYYSTLRHLTN-------ILGLVQYNVDEFLKSDIGQEALG---LSEADITDFIQQRVDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+KNKDF+++D+IR L +G+ L D + TIWR
Sbjct: 438 KKNKDFARADEIRQSLLAQGVVLEDTRQGTIWR 470
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA ligase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2.1|SYC_GEOSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 234/394 (59%), Gaps = 17/394 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PTYQP+ ++H+ ++ +I +++ AY +GDV+F+VE Y +LS + L
Sbjct: 101 MAALGLDLPTYQPKATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E +AG R+ V +KR+P DFALWK +K GEP WDSPWG GRPGWHIECSAMS YL
Sbjct: 161 EEMQAGARIEVGEKKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA YW+HNG V N EKMSKSLGNFFTI+++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y LR FL+SAHYRSP+++S L A+ + IY L + A++ +
Sbjct: 281 LESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAG 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
RI+ + L F M DD NT+ L F D ++ +N L + +
Sbjct: 339 RIDEELAEKAAGLPTRFREAMDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRA 391
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++ S R+ + V +LGL PGA+ E L+ K AL + ++ +LIEER A
Sbjct: 392 VLASARE---AIDRVGAVLGLFTSEPGAFVERLKSRKAAALP---IEAAEIERLIEERNA 445
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK +DF ++D+IR L +GI L+D + T W+
Sbjct: 446 ARKARDFRRADEIRDTLAAQGILLLDSAQGTTWK 479
>gi|409913806|ref|YP_006892271.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 234/394 (59%), Gaps = 17/394 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PTYQP+ ++H+ ++ +I +++ AY +GDV+F+VE Y +LS + L
Sbjct: 101 MAALGLDLPTYQPKATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E +AG R+ V +KR+P DFALWK +K GEP WDSPWG GRPGWHIECSAMS YL
Sbjct: 161 EEMQAGARIEVGEKKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA YW+HNG V N EKMSKSLGNFFTI+++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEAANGKPFARYWIHNGFVNINAEKMSKSLGNFFTIKEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y LR FL+SAHYRSP+++S L A+ + IY L + A++ +
Sbjct: 281 LESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAA--DGTGAG 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
RI+ + L F M DD NT+ L F D ++ +N L + +
Sbjct: 339 RIDEELAEKAAGLPTRFREAMDDDFNTAQALGYVF-DLVRAVNRVL------AEGEIDRA 391
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++ S R+ + V +LGL PGA+ E L+ K AL + ++ +LIEER A
Sbjct: 392 VLASARE---AIDRVGAVLGLFTSEPGAFVERLKSRKAAALP---IEAAEIERLIEERNA 445
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK +DF ++D+IR L +GI L+D + T W+
Sbjct: 446 ARKAQDFRRADEIRDTLAAQGILLLDSAQGTTWK 479
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 223/390 (57%), Gaps = 37/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L CL PT++PR + HM+ + MI ++ D AYV E GDV +AV +YG+LSG++++
Sbjct: 104 LGCLRPTHEPRATAHMDAMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDE 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV VD KR+P DF LWK AKA EP+W SPWG GRPGWHIECSAMS +L FD
Sbjct: 164 LESGSRVDVDQSKRDPLDFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQ+ AA YW+HNG V N EKMSKSLGNFFTIR++TE
Sbjct: 224 IHGGGMDLKFPHHENEIAQARAANGGGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTE 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RYHP LR F++ HYRSPL++S LD A + +Y+T + C QE G T
Sbjct: 284 RYHPEVLRMFMLGTHYRSPLDFSDAALDVAKSGLDRLYKTAKRC-------QESGVTGAG 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A L F M DD NT L F D + +N LN + Q + +
Sbjct: 337 GQAL------LPHHFTTAMDDDFNTPEALAVLF-DTSRALNKGLNEAQDVTALAGQFTAM 389
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L LG ++QQ + ++ + LIEER ARKN
Sbjct: 390 SAL-------------LG---------IVQQDTAIWFQSGDVDAAAIEALIEERLQARKN 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+DF+++D IR +L+ +GI L D T W+
Sbjct: 428 RDFARADAIRNELSAQGIVLEDSASGTTWK 457
>gi|357039770|ref|ZP_09101562.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
gi|355357576|gb|EHG05349.1| cysteinyl-tRNA synthetase [Desulfotomaculum gibsoniae DSM 7213]
Length = 485
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 234/389 (60%), Gaps = 8/389 (2%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P+VS H+ +I ++ ++ AY+V+GDV++ V K YG+LSG+ LE+
Sbjct: 102 LNVLRADIYPKVSGHITEIIKLVETLVEKGFAYLVDGDVYYNVRKFAGYGKLSGRTLEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV +D+RK +P DFALWK+AK GEP+WDSPWG GRPGWHIECSAM+ YL FDI
Sbjct: 162 QAGARVEIDTRKNDPMDFALWKSAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGVNFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS AA YWMHNG +T N EKMSKSLGNFF +R I
Sbjct: 222 HGGGFDLIFPHHENEIAQSEAATGQPFARYWMHNGFITVNQEKMSKSLGNFFLVRDILSE 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R +L+ HYRSPL++ +L +A + I +L+ + AL+ ++ G R +
Sbjct: 282 FSPEVVRFYLLGTHYRSPLDFDDEKLTAAQKGLERIKTSLRLLDEALAG-RQAGSAERPD 340
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
PA + ++R EF M DD NT+ + TG + + +NS L P ++ I
Sbjct: 341 PALAVRLEEIRIEFEKAMDDDFNTA-LATGMLFNLAREVNSYLQRSDFPSPAEK----IA 395
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
+L+K + +LG+ A E L L+D+ ++ ++ E+ + +IE R AR+NK
Sbjct: 396 ALQKARQVFLQFNSVLGVFKTSARGEFL--LEDEGSEKEKVVEDLIDLIIEIRQTARQNK 453
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
D+ +D++R L GI L D W+
Sbjct: 454 DWPTADRMRDRLKELGIVLEDTPGGVRWK 482
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9.1|SYC_DESRM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/389 (44%), Positives = 233/389 (59%), Gaps = 7/389 (1%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + P+VS+H+E+I D+I ++ + AYVV+GDV+FAV YG+LSG+ LE+
Sbjct: 102 LNVMRADTHPKVSEHIEEIIDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWKAAK GEPSWDSPWG GRPGWHIECSAM+ YL + FDI
Sbjct: 162 QAGARVEVDPRKKDPMDFALWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS AAC+ YWMHNG +T N EKMSKSLGNFF +R+I +
Sbjct: 222 HGGGFDLIFPHHENEIAQSEAACKAPFARYWMHNGFITINQEKMSKSLGNFFLVREILAK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R +L+S HYRSPL++ +L + + I L+ A+ G+ +
Sbjct: 282 FPPDVVRWYLLSTHYRSPLDFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGA 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
E+ + ++R EF M DD NT+ + F D K +N + L K L + +
Sbjct: 342 ENFEETLQRIRLEFEKAMDDDFNTA-LAISYFFDLAKEVNIYVGKLNSK----VTLEMRK 396
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
L + +K+ R+LG+L + L L + A LTE V +I+ R AR K
Sbjct: 397 ILDQAHTLIKDFNRVLGILKEDKMTGKL--LIEMAGADDTLTEGLVQLIIKIRQEARSKK 454
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
D+S +D IR L G+ L D + W+
Sbjct: 455 DWSTADAIRDGLKELGVVLEDTPQGVRWK 483
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 227/393 (57%), Gaps = 39/393 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H++ I MI +++ AYV + GDV+FAV P YG+LSG+R E+
Sbjct: 126 LGVLPPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQED 185
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV VD KR+P DFALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FD
Sbjct: 186 LRAGARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFD 245
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A V+YWMHNGHV N+EKM+KSLGNFFT+R++
Sbjct: 246 IHGGGLDLKFPHHENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLS 305
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ A+R FL+S+HYRSPLNYS+ L A A+ +Y L+ A
Sbjct: 306 EHRAEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEA------------- 352
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P E R FHA M DD NT L F+ + +N L++ +
Sbjct: 353 -PVPEADPQGFRARFHAAMDDDFNTPEALAVLFE-----LAREVNRLRQGDDDAGAAAPG 406
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT---EEDVLQLIEERAAA 359
LR + +LGL LQ ++ L+ + + ++ L+ R A
Sbjct: 407 ALLRVLGG-------VLGL---------LQDDPERFLRGGDAGGDEDAEIDALVARRTEA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RKN+DF+++D+IR +L +GI L D + T WR
Sbjct: 451 RKNRDFAEADRIRDELAERGIILEDGPQGTTWR 483
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 177/400 (44%), Positives = 234/400 (58%), Gaps = 31/400 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
LQ LPP +PR ++ ME I M+ +++ AY E GD+++ V YG LSG++L+
Sbjct: 103 LQILPPDREPRATESMEAIIAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV V K +P DF LWKAAK EP+WDSPWGPGRPGWHIECSAMS L FD
Sbjct: 163 LRAGERVQVSEAKTDPLDFVLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA V+YWMHNG V ++EKMSKSLGNFFT+R++ E
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEAATGCKFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
YHP LR+F++S+HYRSPLNY+ QL++A AV +Y L+ G +
Sbjct: 283 HYHPEVLRYFILSSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQEL 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + + F M DD NT L L I +LN +++ K + +
Sbjct: 343 AEGDDPFVQR----FCEAMDDDFNTPEALA-----LLNEIRHALNRAREEGDKDK----V 389
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD----------KALKRAELTEEDVLQL 352
+ L ++ + + ILGLL E Q L+D A A L++ D+ QL
Sbjct: 390 QYLARL---LPSLGAILGLLT----QEPEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQL 442
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I +R AARKNKD++ +D +R L ++GI L D T+WR
Sbjct: 443 IAQRTAARKNKDWAAADHLRDVLKKQGITLEDTPTGTLWR 482
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 238/399 (59%), Gaps = 15/399 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L P +P ++++ + ++I +++ AY DVFF +EK P YG+LSG+++
Sbjct: 101 MDALGVLRPDLEPLATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV VD+RKRNP DF LWK +K GEPSWDSPWGPGRPGWHIECSAM + +L
Sbjct: 161 EDMLAGARVEVDARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA V YW+HNG V NNEKMSKSLGNF TIR +
Sbjct: 221 FDIHGGGKDLIFPHHENEIAQSEAAFGMPFVRYWLHNGFVNINNEKMSKSLGNFLTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQE 235
++ HP +R F++S HYRSP+++S + A + +Y TL + + FQE
Sbjct: 281 LQKVHPETVRFFVLSKHYRSPVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQE 340
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+ +P D I L F M +D NT+ L F + + L+ +KQ K
Sbjct: 341 KALRGQ-DPELFDQIAALSGAFREAMDNDFNTAQALGNLFS-LQRHLQRFLDKFGRKQLK 398
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+L R + +++ +LGLL P A+ + LK +K LTE +V + I
Sbjct: 399 GPASALA---RAGADAIRDHALVLGLLTREPEAFQAEQRSLK---IKSTGLTEAEVERCI 452
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E R AR++K+F+++D++R ++ +KGI L D T WR
Sbjct: 453 ELRRQARQDKNFAEADRLREEIEKKGIQLEDSPAGTRWR 491
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/399 (43%), Positives = 237/399 (59%), Gaps = 27/399 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L PT QP+ + H++ I +++ ++I+ AY +GDV+F+VE P+Y +LS + +
Sbjct: 101 MNRLGLAEPTIQPKATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNM 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ R+G R+ +KRNP DFALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL
Sbjct: 161 DEMRSGARITPGEQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A V YW+HNG V N EKMSKSLGNFFTIR I
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEGATGKPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y P LR F+++AHYRSP+++S Q LQD + LS F E A
Sbjct: 281 LQTYDPEVLRFFILTAHYRSPIDFSD--------------QNLQDARLGLSRFYEGLHAA 326
Query: 241 RINPAA-------EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
AA + L + F M DD NT+ + G DA++ IN L K +
Sbjct: 327 SEVLAACPPGDVTSEAGATLENVFREAMDDDFNTAAAI-GHLFDAVRTIN-RLITEKGFR 384
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+++++ + +L ++ VL + + P A+ L+Q+ L TE D+ I
Sbjct: 385 KNREKVAQVRALYDALLKLGGVLGLF-VSDPAAW---LKQMNLAMLATTGYTESDIEDFI 440
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+R ARKNKDF+++D+IR +L KGI L+D + T W+
Sbjct: 441 RQRQEARKNKDFARADEIRDELAAKGIQLLDGPQGTAWK 479
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 227/393 (57%), Gaps = 39/393 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H++ I MI +++ AYV + GDV+FAV P YG+LSG+R E+
Sbjct: 103 LGVLPPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV VD KR+P DFALWKAA+ GEP+W SPWG GRPGWHIECSAMS L FD
Sbjct: 163 LRAGARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A V+YWMHNGHV N+EKM+KSLGNFFT+R++
Sbjct: 223 IHGGGLDLKFPHHENEIAQSECATGHPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLS 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ A+R FL+S+HYRSPLNYS+ L A A+ +Y L+ A
Sbjct: 283 EHRAEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEA------------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P E R FHA M DD NT L F+ + +N L++ +
Sbjct: 330 -PVPEADPQGFRARFHAAMDDDFNTPEALAVLFE-----LAREVNRLRQGDDDAGAAAPG 383
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT---EEDVLQLIEERAAA 359
LR + +LGL LQ ++ L+ + + ++ L+ R A
Sbjct: 384 ALLRVLGG-------VLGL---------LQDDPERFLRGGDAGGDEDAEIDALVARRTEA 427
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RKN+DF+++D+IR +L +GI L D + T WR
Sbjct: 428 RKNRDFAEADRIRDELAERGIILEDGPQGTTWR 460
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 233/394 (59%), Gaps = 18/394 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT+QP+ ++H+ +I +++ ++I+ AY DVF+ V++ Y +LS + L
Sbjct: 101 MARLMLQLPTFQPKATEHIPEIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG R+ VD RK +P DFALWK AK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 161 EDMQAGARIDVDERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQS AA V YW+HNG V N+EKMSKSLGNFFTI++I
Sbjct: 221 LDIHGGGKDLIFPHHENEIAQSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y LR FL+SAHYRSP+++S L A + IY+ L + L+ H
Sbjct: 281 LESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIDERLAS-GAHTPAD 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + + F M DD NT+ L G D ++ IN L
Sbjct: 340 ADNTEFAEKVAGFAGRFGDAMDDDFNTALAL-GHLFDLVRVINREL--------PTASTG 390
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L+E K++ EV ++ +LG+ P A+ LQ++KD+ E++ E++ LI ERA
Sbjct: 391 LLE---KVKAEVAKMAAVLGICDSVPAAF---LQRMKDRKTSDMEMSAEEIETLIAERAE 444
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+F + D+IR L K I L+D + T W+
Sbjct: 445 ARKAKNFKRGDEIRDLLLEKNIVLLDSAQGTTWK 478
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 238/395 (60%), Gaps = 31/395 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L CL P PR +D+++Q+++MI ++N AY E GDV+F VEK YGRLSG++L
Sbjct: 103 ARLGCLEPDEAPRATDYIDQMQNMIGNLVNKGTAYPSENGDVYFEVEKFAKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S L A + Y A +Q+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDFALKEAKTTLSRFYH-------AFKAYQQVYG 335
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T + + + F+A MSDD NT+ + F+ I LN K++ + Q
Sbjct: 336 TKTVTTLDTSFVER----FNAAMSDDFNTAEAIAVLFE-----IIKELNRAVKEENEAQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLK-DKALKRAELTEEDVLQLIEERA 357
+LR + + IL L+ +V + LK D ++ L+E ++ LI++R
Sbjct: 387 TIFYSTLRHLTH-------ILALVQ----YDVDEFLKSDIGQEQLGLSEAEIEDLIQQRV 435
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+KNKDF+ +D IR L +G+ L D + T+WR
Sbjct: 436 DAKKNKDFANADAIRQSLLDQGVVLEDTRQGTVWR 470
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/384 (42%), Positives = 236/384 (61%), Gaps = 21/384 (5%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
PT PR ++H+++I +I +I+ N AYVV GDV+F V+ P YG+LS Q LE ++G R
Sbjct: 110 PTVAPRATEHIDEIISLIEKIMKNGHAYVVNGDVYFDVQSYPEYGKLSKQTLEELQSGAR 169
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
V ++ K++P DFALWKA K GEPSW SPWG GRPGWHIECSAM+ YL DIH GG
Sbjct: 170 VEINPNKKHPLDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAIKYLGETIDIHTGGS 229
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DL+FPHHENEIAQ+ AA V YWMHNG++ N EKMSKSLGNF T R+ +++HP+A
Sbjct: 230 DLVFPHHENEIAQAEAATGKPFVKYWMHNGYLMINAEKMSKSLGNFLTAREARKKFHPVA 289
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
+R F++SAHYR+PLN+SV L +++ + +++C L +E + + +
Sbjct: 290 IRLFMLSAHYRTPLNFSVENLINSAKGA----ERIRNCWNELLNAEERCYDSGTSMGETE 345
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
IN L+++F + + DD NT+ + G +A+K +N L + + I+S + +
Sbjct: 346 TINSLKEKFDSNLKDDFNTAGAI-GVLFEAVKIVNQVL------KGNNFDKNFIDSAKAL 398
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
E+L I+ ++ LK + + EL EE + +LI ER ARK ++F+K+
Sbjct: 399 MRYADEILGII---------DINNTLKAEN-ESTELNEELINELIREREEARKQRNFAKA 448
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR L+ GI L D T W+
Sbjct: 449 DEIRDKLSSMGIVLEDTPSGTRWK 472
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/394 (44%), Positives = 235/394 (59%), Gaps = 38/394 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L L P +P +D ME I MI Q+I ND AYV DV++ VE NYG+LSG++L
Sbjct: 103 ASLNVLSPDIEPLATDSMEAIITMIEQLIANDNAYVGPNNDVYYCVESFENYGQLSGRKL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AGERV VDS KRNP DF LWK+AK EPSW SPWG GRPGWHIECSAM+ L +
Sbjct: 163 DDMNAGERVDVDSSKRNPFDFVLWKSAKPDEPSWSSPWGNGRPGWHIECSAMATCCLGNH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL FPHHENEIAQS AA + V+ WMHNG V ++EKMSKSLGNFFT+R +
Sbjct: 223 FDIHGGGMDLQFPHHENEIAQSEAATGEKYVNTWMHNGFVRIDDEKMSKSLGNFFTVRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y +R F++S+HYRSPLNYS QL + A+ +Y L+D ++P + K+
Sbjct: 283 LKKYRGEEIRFFVLSSHYRSPLNYSDDQLTESRSALERLYTALRD----VTPVKNEVKST 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I ++F M+DD N++ + F+ A + LN LK QP+Q +
Sbjct: 339 YI------------EQFENAMNDDFNSAKAIAVLFECA-----NELNKLKHTQPEQAAKT 381
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ L E LGLL P + LK A + A ++ E++ I +R
Sbjct: 382 AADLLTMAEP--------LGLLSQDPDLF------LKSMAGQDASISNEEIEAQINQRLE 427
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ NK++ +DQIR L +G+ L D G ET WR
Sbjct: 428 AKANKNWGLADQIRDSLKEQGVILEDKGPETTWR 461
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 242/393 (61%), Gaps = 31/393 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L CL P PR +++++Q+++MI ++++N AY GDV+F VE+ YGRLSG++L++
Sbjct: 105 LGCLAPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDD 164
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG +RV V+ K++P DF LWK AK EP W+SPWG GRPGWHIECSAMS L +
Sbjct: 165 MQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNH 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTIR +
Sbjct: 225 FDIHGGGSDLLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDV 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E++HP +R+F++S+HYRSP+N+S + L A A+ Y A +Q+
Sbjct: 285 MEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYH-------AFKAYQQ----- 332
Query: 241 RINPAAEDCINKLRDE-FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ N D +++ E F+A M DD NT+ + F+ A LN K++ +Q
Sbjct: 333 QFNEELTDHFSQIHLERFNAAMCDDFNTAEAMAVLFELA-----KELNRALKEENAEQAK 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E ++ +LI++R A
Sbjct: 388 VFYSTLRHLTN-------ILGLVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K KDF+K+D IR +L +G+ L D + T+WR
Sbjct: 438 KKAKDFTKADSIRQNLLNQGVVLEDTRQGTLWR 470
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 238/394 (60%), Gaps = 18/394 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ T PRVS+HM QI DM+ +IN AY+ +GDV+++VEK +YG+LSG+ L
Sbjct: 101 MDPLRIRRATVYPRVSEHMPQIIDMVQTLINKGYAYLADGDVYYSVEKFHDYGKLSGRSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ +AG RV VD RKR+P DFALWK+ K GEPSWDSPWGPGRPGWHIECSAMS HYL
Sbjct: 161 DDMKAGARVEVDERKRHPMDFALWKSVKPGEPSWDSPWGPGRPGWHIECSAMSFHYLGKS 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
FD HGGG DLIFPHHENEIAQS A C++ V YW+HNG +T N EKMSKSLGNFF ++
Sbjct: 221 FDFHGGGSDLIFPHHENEIAQSEAFCGCEEPCVHYWLHNGFITVNEEKMSKSLGNFFLVK 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
I + P LR F++S HYRSPL++S +L A ++ + +T Q+ L+ G
Sbjct: 281 DILTHFSPEVLRFFIVSTHYRSPLDFSDERLAEAGRSLERL-KTAQENLKYLATLPA-GA 338
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ + + + + EF+ M DD NT+ + + F + +N+ + +
Sbjct: 339 ASEGSHTLTEAAQRAKTEFYEAMDDDFNTALVTSVMFG-----LAKEINIYHHEVVNGRV 393
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
S +++ ++ E +K + LG VLQ+ ++ + EL E+ + +I R
Sbjct: 394 GSDLQACKEAEQALKVMADTLG---------VLQENSARSDENQELVEQLMQLIITIRQE 444
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+ KD++ +DQIR L GI L D + W+
Sbjct: 445 ARQKKDWATADQIRDRLHDAGIVLEDSPQGARWK 478
>gi|352684343|ref|YP_004896328.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
gi|350278998|gb|AEQ22188.1| cysteinyl-tRNA synthetase [Acidaminococcus intestini RyC-MR95]
Length = 474
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 227/388 (58%), Gaps = 28/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVSDH+ I + Q+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD
Sbjct: 105 PRVSDHIPDIIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVD 164
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWK+AK GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIF
Sbjct: 165 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIF 224
Query: 133 PHHENEIAQS-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A C V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+
Sbjct: 225 PHHENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRY 284
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AA 246
F++ HYRSPL++S +L AS ++L+ A E + P A
Sbjct: 285 FILQTHYRSPLDFSDARLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLAL 337
Query: 247 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ ++ + F M DD NTS ++ F + +N+L + Q + +
Sbjct: 338 REKVSGFVESFLEAMRDDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVD 392
Query: 307 KIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
++ KE+ I+G+L PGA +E A+K A+ + LI ER ARK KD
Sbjct: 393 MMDKAWKEMTSIIGILEEDPGAKTE--------AVKDADEDAAAIESLIAERQEARKAKD 444
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
F K+D IR +L +KGI L D + W+
Sbjct: 445 FKKADAIRDELAQKGILLEDTPQGVRWK 472
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 242/393 (61%), Gaps = 31/393 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L CL P PR +++++Q+++MI ++++N AY GDV+F VE+ YGRLSG++L++
Sbjct: 105 LGCLEPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDD 164
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG +RV V+ K++P DF LWK AK EP W+SPWG GRPGWHIECSAMS L +
Sbjct: 165 MQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNH 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTIR +
Sbjct: 225 FDIHGGGSDLLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDV 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E++HP +R+F++S+HYRSP+N+S + L A A+ Y A +Q+
Sbjct: 285 MEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYH-------AFKAYQQ----- 332
Query: 241 RINPAAEDCINKLRDE-FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ N D +++ E F+A M DD NT+ + F+ A LN K++ +Q
Sbjct: 333 QFNEELTDHFSQIHLERFNAAMCDDFNTAEAMAVLFELA-----KELNRALKEENAEQAK 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E ++ +LI++R A
Sbjct: 388 VFYSTLRHLTN-------ILGLVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K KDF+K+D IR +L +G+ L D + T+WR
Sbjct: 438 KKAKDFTKADSIRQNLLNQGVVLEDTRQGTLWR 470
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 227/388 (58%), Gaps = 28/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVSDH+ I + Q+I++ YVV+GDV++ VEK +YG LSG+ L++ AG RV VD
Sbjct: 114 PRVSDHIPDIIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWK+AK GEPSWDSPWG GRPGWHIECS MS YL S FD HGGG DLIF
Sbjct: 174 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A C V YW+HNG +T N EKMSKSLGNFFT+ I + Y P LR+
Sbjct: 234 PHHENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDILKEYEPEVLRY 293
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP-----AA 246
F++ HYRSPL++S +L AS ++L+ A E + P A
Sbjct: 294 FILQTHYRSPLDFSDARLKEAS-------RSLERLRTAAQNLTELKGVISVGPDEDSLAL 346
Query: 247 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ ++ + F M DD NTS ++ F + +N+L + Q + +
Sbjct: 347 REKVSGFVESFLEAMRDDFNTSLAISYLFA-----LGKEINILHQSVMTGGQKPDGKLVD 401
Query: 307 KIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
++ KE+ I+G+L PGA +E A+K A+ + LI ER ARK KD
Sbjct: 402 MMDKAWKEMTSIIGILEEDPGAKTE--------AVKDADEDAAAIESLIAERQEARKAKD 453
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
F K+D IR +L +KGI L D + W+
Sbjct: 454 FKKADAIRDELAQKGILLEDTPQGVRWK 481
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 236/388 (60%), Gaps = 27/388 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + PT +PR +DH+ I +I ++++ AY + GDVF+AV P YG+LSG+ +E+
Sbjct: 150 LGLVNPTIEPRATDHIPDIIAIINKLVDKGLAYQIGGDVFYAVRSFPQYGKLSGKNIEDL 209
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+G RV V K++P DFALWK+AK EP W SPWG GRPGWHIECSAMS YL FDI
Sbjct: 210 ESGARVDVSDVKKDPLDFALWKSAKPNEPKWPSPWGEGRPGWHIECSAMSTKYLGDTFDI 269
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DLIFPHHENEIAQS A +W+HNG + ++EKMSKSLGNFFT R++ ++
Sbjct: 270 HCGGCDLIFPHHENEIAQSEGATGKPFARFWVHNGFLNIDSEKMSKSLGNFFTTREVLKK 329
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-------PFQEH 236
+ A+RHF++SAHYRSP++YS + + A+ YQT E + P Q+H
Sbjct: 330 FPAEAIRHFILSAHYRSPIDYSEKNISDSIKALERFYQTKSRLEKFIQQPSDPAIPSQQH 389
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
PA + L++EF + DDLNT+ ++ F+ ++ + ++ + + Q
Sbjct: 390 ------VPAK---LENLKNEFIMALDDDLNTAMVMGLVFE----WVRTWNKLIDENRANQ 436
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ + I N++ +VL + G AY L +LK K + + EED+L+LIEER
Sbjct: 437 KD---AKDFLDIINDIHKVLGVFG-SDANAY---LDELKQKGMAGLLVLEEDILKLIEER 489
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMD 384
ARKN+DF +SD+IR L ++GI L D
Sbjct: 490 KLARKNRDFKRSDEIRDQLLKQGITLKD 517
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 242/393 (61%), Gaps = 31/393 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L CL P PR +++++Q+++MI ++++N AY GDV+F VE+ YGRLSG++L++
Sbjct: 105 LGCLEPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDD 164
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG +RV V+ K++P DF LWK AK EP W+SPWG GRPGWHIECSAMS L +
Sbjct: 165 MQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNH 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTIR +
Sbjct: 225 FDIHGGGSDLLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDV 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E++HP +R+F++S+HYRSP+N+S + L A A+ Y A +Q+
Sbjct: 285 MEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYH-------AFKAYQQ----- 332
Query: 241 RINPAAEDCINKLRDE-FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ N D +++ E F+A M DD NT+ + F+ A LN K++ +Q
Sbjct: 333 QFNEELTDHFSQIHLERFNAAMCDDFNTAEAMAVLFELA-----KELNRALKEENAEQAK 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E ++ +LI++R A
Sbjct: 388 VFYSTLRHLTN-------ILGLVQHNVDDFLRSDIGQEALG---LSESEIEELIQQRVDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K KDF+K+D IR +L +G+ L D + T+WR
Sbjct: 438 KKAKDFTKADSIRQNLLDQGVVLEDTRQGTLWR 470
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/381 (45%), Positives = 228/381 (59%), Gaps = 9/381 (2%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P VS+H+ I M+ +++ AYVV+G+V+F V K YG+LSG+ LE+ +AG RV V
Sbjct: 110 HPLVSEHIPDIIKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEV 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
D RKR+P DFALWKAAK GEP WDSPWGPGRPGWHIECSAMS YL + FDIHGGG DLI
Sbjct: 170 DPRKRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS AA V YWMHNG +T N EKMSKSLGNFF +R I ++ P +R
Sbjct: 230 FPHHENEIAQSEAATGQPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILAKFPPELVRF 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
FL+S HYRSPL++ ++ +A + I +L+ AL G A + D +
Sbjct: 290 FLLSTHYRSPLDFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQA---VCSRDPFD 346
Query: 252 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 311
++R F A M DD NT+ + GA D + N+++ Q + L +L + NE
Sbjct: 347 EIRASFEAAMDDDFNTA-LAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYAL-DLFNE 404
Query: 312 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 371
EVL I + GA +L + A + L E + ++E R ARK KD+S +D+I
Sbjct: 405 FNEVLGIFKV--DGASGRLL--IDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRI 460
Query: 372 RADLTRKGIALMDMGKETIWR 392
R L GI L D + W+
Sbjct: 461 RDGLKELGILLEDTPQGVRWK 481
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C+ P P+ +++++Q++ MI +++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCVLPDEAPKATEYIDQMQSMIATLVDNGTAYPAANGDVYFEVTKFDKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S L A A+ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDFALKEAKTALSRFYHSFKAYQ------QMYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
E F+A M DD NT+ + F+ +N LN K++ +Q
Sbjct: 337 -----KTVETLEQGFVKRFNAAMRDDFNTAETMAVLFE-----LNKELNRAVKEETAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRYLTN-------ILGLVQHDVDEFLKSDIGQEALS---LSDTEIENFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+++D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAQADAIRQSLLDQGVVLEDTRQGTIWR 470
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 235/395 (59%), Gaps = 29/395 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
A L CL P P+ +D+++Q++ MI +++ AY GDV+F VEK YGRLSG++
Sbjct: 102 FAKLGCLAPDVAPKATDYIDQMQAMIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRK 161
Query: 60 LENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
LE+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 162 LEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCL 221
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ FDIHGGG DL FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTI
Sbjct: 222 GNHFDIHGGGADLTFPHHENEIAQSEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTI 281
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R + E++HP +R+F++S+HYRSP+NYS + L A + + Y + + + + +H
Sbjct: 282 RDVIEKFHPEVVRYFIVSSHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAV---YGDH- 337
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
E L + F+A M DD NT + F+ IN LN K++ +Q
Sbjct: 338 -------LIETLDEALVERFNAAMRDDFNTPEAIAVLFE-----INKELNRTVKEENAEQ 385
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+LR + N ILGL+ + + +AL L+ E + LI++R
Sbjct: 386 AAIYYATLRHLTN-------ILGLVQQNVDEFLKSDIGQEALG---LSPEQIEDLIQQRQ 435
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K K+F+++D+IR L +G+ L D + T+WR
Sbjct: 436 DAKKAKEFARADEIRQSLLDQGVVLEDTRQGTVWR 470
>gi|451947839|ref|YP_007468434.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
gi|451907187|gb|AGF78781.1| cysteinyl-tRNA synthetase [Desulfocapsa sulfexigens DSM 10523]
Length = 489
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 234/385 (60%), Gaps = 11/385 (2%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
PT +P+ ++H++++ D+++++I+ AY GDV++ V YG+LSG+ L++ +AG R
Sbjct: 109 PTMEPKATEHIQEMIDLVSELIDKGMAYPAGGDVYYKVHSFDGYGKLSGRNLDDMQAGAR 168
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
V+V+ K +P DF +WKA+K GEPSWDSPWGPGRPGWHIECSAMS YL S FDIHGGG
Sbjct: 169 VSVNENKTDPMDFVMWKASKPGEPSWDSPWGPGRPGWHIECSAMSRKYLGSTFDIHGGGQ 228
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENE+AQS A V+ W+H+G VT +EKMSKSLGNF TIR I YHP
Sbjct: 229 DLIFPHHENELAQSEGANNKPFVNMWIHHGFVTIRDEKMSKSLGNFLTIRDILAHYHPEV 288
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR F+ S YR+PL++S + A + +Y+ + C+ AL H +A I +D
Sbjct: 289 LRFFIFSTQYRNPLDFSEAAMQDAMTGLDRLYECIAACD-ALG--TAHSDSAEIVATPKD 345
Query: 249 C--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
I L + F M +D NT+ F+ +K IN + L P S L+
Sbjct: 346 IKKIESLEERFQKAMDNDFNTAQAQASLFE-TVKVINKIIQQL----PDVPATSDYNLLK 400
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
++ ++ I+G++ A +E L K L +++E ++L LI ER AR +K+++
Sbjct: 401 SGSADIVKLAAIMGIVQENA-AEYLAHKKAAMLAETDISEAEILALIAERNQARTDKNWT 459
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
+SD+IR +L +GI L D + T W
Sbjct: 460 RSDEIRDELLDRGIELKDGPEGTGW 484
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 229/385 (59%), Gaps = 15/385 (3%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVE----GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
+P+ ++H+ ++ ++I +IN AY +E V+F+VEK P YG+LS ++++ +G
Sbjct: 110 EPKATEHINEMIEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGA 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VD RK++P DFALWKA+K GEP WDSPWG GRPGWHIECSAMS YL FDIHGGG
Sbjct: 170 RVEVDERKKSPLDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGG 229
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DLIFPHHENEIAQS A YW+HNG VT N EKMSKSLGN IR + + Y
Sbjct: 230 ADLIFPHHENEIAQSEAFTGKPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDIYDAE 289
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
ALR FL+S+HYRSP+ ++ + A V +Y T+ E + + K++ +
Sbjct: 290 ALRLFLLSSHYRSPIEFAHEYIKEAEATVDRVYSTIMRIE-DFEKIEINDKSSIEFDKVK 348
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ L+ EF M DD NT+ L F+ FI + KK + +++ + + ++
Sbjct: 349 AMLENLKPEFEKAMDDDFNTAKALGILFE----FIKEINRFMDKKPSQNKEIDFLVTAKR 404
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
E+ VL + P Y ++L+ +K+ + EE++ +LI+ER ARKNKD+ K
Sbjct: 405 AIKEIGSVLNLFQRQPVDWYRDLLK------VKKIAIKEEEINRLIKERTEARKNKDWKK 458
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D IR L KGI L D TIW+
Sbjct: 459 ADSIREQLLSKGIILEDKPDRTIWK 483
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 234/384 (60%), Gaps = 24/384 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P ++H+++I +I++I+ AYVVEG+V+F V+ P YG+LSGQ LE +AG R+
Sbjct: 110 TVHPLATEHIDEIIALISRIMERGHAYVVEGNVYFDVKSFPGYGKLSGQGLEELQAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD+RK++P DF LWKA K GEP WDSPWGPGRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDARKKHPLDFVLWKARKPGEPWWDSPWGPGRPGWHIECSAMAMKYLGETIDIHGGGSD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA V YW+HNG++ N EKMSKSLGN T R++ +Y PLA+
Sbjct: 230 LIFPHHENEIAQSEAATGKQFVRYWIHNGYLLINKEKMSKSLGNILTARELIGKYQPLAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAED 248
R F++ AHYRSPL++S L A ++ Q L++C L + E + + +D
Sbjct: 290 RLFILGAHYRSPLDFSEESLTQAVRSM----QRLRNCYSDLIFYMERSEEKDTPDTWLDD 345
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
I K +F + DD NT+ L F+ I LN K + +LI + +K
Sbjct: 346 VIRKGYIKFCEALDDDFNTAGALGSVFE-----IVRDLNNYLKDSASLDKNALINA-KKF 399
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ V+E++ ++G+ A +E EL+ +++ +LI+ER AR+ +DF+++
Sbjct: 400 FDAVEEIMGVIGIDTIFATAE-------------ELSPDEIEKLIKERNEARRKRDFARA 446
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D IR +L KGI L D T W+
Sbjct: 447 DAIRNELASKGIILEDTPLGTRWK 470
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 237/390 (60%), Gaps = 32/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + + +I MI +++ + AY+ + GDV +A+++ NYG+LSG+ L++
Sbjct: 103 LNVIRPDIEPRATQSIPEIVAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV V+ K++P DF LWK AK GEPSW+SPWG GRPGWHIECSAMS H L + FD
Sbjct: 163 LRAGERVEVNESKQHPLDFVLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A ++ V+ WMHNG V N+EKMSKSL NFFT+R++ E
Sbjct: 223 IHGGGMDLQFPHHENEIAQSEGATGETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY P +R+F++++HYRS LNYS +L++A ++ +Y ++D P +
Sbjct: 283 RYQPEVVRYFILTSHYRSELNYSEQELEAAKQSITRLYIAIRDL-----PNTDE------ 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P +D N+ F M+DD NT L F ++ +N+L++K+ + + L
Sbjct: 332 -PCPDDSYNQ---RFLTAMNDDFNTPEALAALFS-----LSKEINILRRKK-VSEAIPLA 381
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E L L P + + Q K+ L E+ QLI ER ARKN
Sbjct: 382 S-----ELRRLGNLLGLLQAKPETFLQGTSQEKEPGLSVTEIE-----QLIVERIDARKN 431
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+DF+ +DQIRADLT KGI L D + T WR
Sbjct: 432 RDFATADQIRADLTAKGIILEDNAQGTSWR 461
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 239/390 (61%), Gaps = 28/390 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L PT +PR + H+++I MI ++++ AY GDV+++VE+ +YG+LS Q+L+
Sbjct: 103 LGVLSPTSEPRATGHIDEIIAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG R+ VD+ KR+PADF LWKAAK GE SWDSPWG GRPGWHIECSAMS L FD
Sbjct: 163 IRAGARIEVDAEKRSPADFVLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA V+YWMH G V N EKMSKSLGNFFTIR+I +
Sbjct: 223 IHGGGPDLKFPHHENEIAQSEAATGCKYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILD 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y +R+FL S+HYRS ++YS + L+ A + +Y ++++ + E G +
Sbjct: 283 KYPAEVVRYFLASSHYRSAIDYSDVALEEARSGLERLYNSIREL------YGELGAVSMD 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P + + R+ FH M DD NTS + F D K +N + KK+ + + LSL
Sbjct: 337 EP----LVGEYRERFHQAMDDDFNTSSAVAVLF-DMAKAVN-----VAKKEDRTRALSLA 386
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ + ++ +LGLL A E L Q + + + L+ ++ I +R AAR N
Sbjct: 387 KGM-------VDLAEVLGLLQ--ADPESLMQGEGEEV--GGLSVAEIEDFIAQRNAARAN 435
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KDF++SD+IR L KG+ L D + T W+
Sbjct: 436 KDFAESDRIRDLLKEKGVLLNDSREGTSWQ 465
>gi|334338878|ref|YP_004543858.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334090232|gb|AEG58572.1| cysteinyl-tRNA synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 486
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/392 (44%), Positives = 234/392 (59%), Gaps = 7/392 (1%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P+VS+H+++I ++I + AY VEGDV+F+V P YG+LSG+ LE+
Sbjct: 102 LNVLRADRYPKVSEHIKEIINLIKLLQERGHAYEVEGDVYFSVRSFPGYGKLSGRSLEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWKAAK EPSW SPWG GRPGWHIECSAM+ YL S FDI
Sbjct: 162 QAGARVEVDPRKKDPMDFALWKAAKPEEPSWQSPWGNGRPGWHIECSAMAGKYLGSGFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS AAC+ YWMHNG +T N EKMSKSLGNFF +R+I ++
Sbjct: 222 HGGGFDLIFPHHENEIAQSEAACKQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILDK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R FL+S HYRSPL++ +L A + I L+ A+ + A
Sbjct: 282 FPPDVIRWFLLSTHYRSPLDFDDEKLAVAGRGLERIKTALRLLYEAMERPASGEEEAGAG 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+ + + LR EF M DD NT+ ++ F+ A K IN +N + K + L
Sbjct: 342 SSFHEKLTLLRLEFEKAMDDDFNTALAISVFFELA-KEINILVNGMGDKISPEAVL---- 396
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
++ + + VKE R+LG+L S L + + + + LTE V +I+ R AR K
Sbjct: 397 AMEQAHDLVKEFNRVLGVLKEDPVSGKL--VLETSGEDDGLTEGLVQLIIKIRQEARSKK 454
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
D+S +D IR L GI L D + W+ V
Sbjct: 455 DWSTADTIRDGLKELGIILEDTPQGVRWKKQV 486
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/399 (44%), Positives = 234/399 (58%), Gaps = 43/399 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY--VVEGDVFFAVEKSPNYGRLSGQR 59
A L CL P +PR + +M+ I +I ++++ AY V EG +++AVE+ YGRLSG+R
Sbjct: 101 AALGCLLPDAEPRATAYMDAIVALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGER 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE RAG RV + KR+ ADF LWKAAK GEPSW +PWG GRPGWHIECSAM+ L
Sbjct: 161 LEALRAGARVEPGAGKRDAADFVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQ 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG+DL FPHHENEIAQS AA V++WMHNGH+ N+EKMSKSLGNFFT+R+
Sbjct: 221 HFDIHGGGLDLKFPHHENEIAQSEAAWGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVRE 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + Y +R+FL+S+HYRSPLNYS LD++ A+ +Y L+D PF E
Sbjct: 281 VLQVYRAEEIRYFLLSSHYRSPLNYSTSDLDNSRAALERLYLALRDL-----PFTE---- 331
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A+ R+ F M DD NT L F D + IN ++ + + Q
Sbjct: 332 -----ASPALAAPYREAFRQAMDDDFNTPLALAVLF-DLAREINR-----RRDRFESQAA 380
Query: 300 SLIESLRKIENE------VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+L +LR++ EV L GA S V + E V L+
Sbjct: 381 ALAATLRELGGLLGLAQVAPEV-----FLKGGAGSSVA----------VGIASERVEALL 425
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ERA ARKN+DF+ +D+IR +L +GIAL D + T WR
Sbjct: 426 AERALARKNRDFATADRIRDELQAQGIALEDTPQGTAWR 464
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/397 (42%), Positives = 232/397 (58%), Gaps = 44/397 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P+++PR +++++ + MI ++N + AYV GDVF+ V + P YG+LSG+ L++
Sbjct: 103 LGVISPSFEPRATEYVDSMIAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV +D+ KR+P DF LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +FD
Sbjct: 163 LRAGERVEIDTNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS S+V+YWMHNG V +NEKMSKSLGNFFT+R++
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGVHGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLT 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTL------QDCEVALSPFQEH 236
RY P +R F++ AHYRSPLNYS L+ A A+ +Y L QD EVA
Sbjct: 283 RYQPEVVRFFIVRAHYRSPLNYSDAHLNDARSALERLYTVLKNHAPSQDSEVA------- 335
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
TA I+ E+ + R F + M+DD NT + F A
Sbjct: 336 --TAVID--WENNVYARR--FMSAMNDDFNTPEAVAVLFDLA------------------ 371
Query: 297 QQLSLIESLRKIENEVKEVLRIL-GLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
E+ R ++ +L+ L G+L L+ + + E++ +I++
Sbjct: 372 -----SEANRTGDSHYASLLKALGGVLGLLQQPPQQYLQYPAHLQDGQYSVEEIENMIQQ 426
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ARK ++F+++D +R L GI L D + T WR
Sbjct: 427 RLQARKERNFAQADTLRQQLAEAGIILEDSPQGTTWR 463
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 229/389 (58%), Gaps = 7/389 (1%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + P+VS+H+ +I D+I Q+ AYV +GDV+FAV P YG+LSG+ LE+
Sbjct: 102 LNVMRADKHPKVSEHIAEIIDLIKQLEQQGHAYVADGDVYFAVRSFPGYGKLSGRSLEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV +D RK++P DFALWKAAK GEPSW SPWG GRPGWHIECSAM+A YL + FDI
Sbjct: 162 QAGARVEIDPRKKDPMDFALWKAAKPGEPSWPSPWGAGRPGWHIECSAMAAKYLGNGFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS AAC YWMHNG +T N EKMSKSLGNFF +R+I +
Sbjct: 222 HGGGFDLIFPHHENEIAQSEAACGQPFARYWMHNGFITVNQEKMSKSLGNFFLVREILAK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R +L+S HYRSPL++ +L A + + L+ AL Q+ A
Sbjct: 282 FPPEVVRWYLLSTHYRSPLDFDDEKLAMAGKGLERLKTALRLLYEALELPQQQAAMADEG 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
D + LR +F M DD NT+ ++ F+ A K IN + L K +Q+ +
Sbjct: 342 GDLADKLATLRLDFEKAMDDDFNTALAISVFFELA-KEINIFVGRLDGKLTDRQK----D 396
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
L K + K+ +LG+ S L L D +L + + +++ R AAR K
Sbjct: 397 LLVKAHDLFKDFNGVLGVFKEDQQSGRL--LIDAVNTDNKLVDGLINLIVKVRQAARSQK 454
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
D++ +D IR L G+ L D + W+
Sbjct: 455 DWATADTIRDGLKELGVILEDTPQGVRWK 483
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/409 (42%), Positives = 241/409 (58%), Gaps = 25/409 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L LPPT +P ++H+ ++ MI +++ D AY +GDV++ V++ YG LSG+ L
Sbjct: 101 MTALNTLPPTLEPLATEHLPEMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG RVAV+ K +P DF LWKA+K GEP+WDSPWGPGRPGWHIECSAM YL
Sbjct: 161 EDMQAGARVAVNDNKEHPMDFVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A S + W+H+G VT +EKMSKSLGNF TIR++
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEGASGKSFANLWVHHGFVTIKDEKMSKSLGNFLTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ER+ ALR F+ S HYR+PL+YS L A A+ IY L + Q G
Sbjct: 281 LERHPAEALRLFVFSTHYRNPLDYSETALQDAEAALTRIYSALA------ATAQLPGAAG 334
Query: 241 RINPAA-------EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
+P+A D + KL FH M D N++ L F DA+K IN L
Sbjct: 335 DPSPSASVVGEKDRDKLAKLEQSFHQAMDIDFNSALALGRIF-DAIKIINKVRQALPAN- 392
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
P Q L L L++ ++++ + GL P ++ E QQ + L + + ++
Sbjct: 393 PAPQDLQL---LQQTAATIRDLTAVFGLAQEEPVSWLEKRQQ---RLLAQLSIKPAEIEA 446
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQE 400
L+E+R AR++KD++++D+IR L ++ I + D T W VL EQ+
Sbjct: 447 LLEQREQARRDKDWAEADRIRDQLLQQRIVIKDGPDGTKWE--VLQEQQ 493
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/390 (44%), Positives = 229/390 (58%), Gaps = 9/390 (2%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P+VS+H+++I D+I + AY V+GDV+FAV P YG+LSG+ LE+
Sbjct: 109 LNVLRADVHPKVSEHIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDM 168
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDI
Sbjct: 169 QAGARVEVDVRKKDPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDI 228
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS A+C YWMHNG +T N EKMSKSLGNFF +R+I ++
Sbjct: 229 HGGGFDLIFPHHENEIAQSEASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDK 288
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R FL+S HYRSPL++ +L A + I ++ AL GK A
Sbjct: 289 FPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDA 348
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL-NMLKKKQPKQQQLSLI 302
+ + LR EF M DD NT+ ++ F + K IN + N+ P +QL
Sbjct: 349 ARFKGKLAALRSEFEQAMDDDFNTALAIS-VFFELSKEINILVGNLGGVVTPAARQL--- 404
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L VK+ +LG+L S L L + K +L + V +I+ R AR
Sbjct: 405 --LADAHALVKDFNYVLGILKEDQTSGRL--LLEAPAKDDKLVDALVQLIIKIRQEARGK 460
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D IR L GI L D + W+
Sbjct: 461 KDWATADAIRDGLKELGIILEDTPQGVRWK 490
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 233/390 (59%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR ++ M+ + DMI +I+ AYV E GDV++ V + YG+LSG+++++
Sbjct: 79 LGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENGDVYYDVSEFSGYGKLSGRQVDD 138
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGER+AV+ K +P DF LWKAAK EP+WDSPWGPGRPGWHIECSAMSA L FD
Sbjct: 139 LRAGERIAVNEAKTDPLDFVLWKAAKPEEPAWDSPWGPGRPGWHIECSAMSAECLGHHFD 198
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A +V+YWMHNG V ++EKMSKSLGNFFT+R++
Sbjct: 199 IHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLA 258
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y A+R+F++ +HYRSPLNY+ QL+ A A+ Y +L+D ++E + A
Sbjct: 259 KYPAEAVRYFILMSHYRSPLNYAEDQLEQAKTALTRFYHSLRDVTPETVSWREDAEFA-- 316
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
F M DD NT+ L+ L + +LN+ +++ +Q+ L
Sbjct: 317 ------------SRFAEAMDDDFNTALALS-----VLADVRQALNIAREENDEQKSAYLA 359
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L +LGL A + + +D+A K + QLI ER AAR
Sbjct: 360 GLLLAFGE-------VLGLFQQSAEAFLTGGQQDEAGK--------IEQLIAERNAARAA 404
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S++DQ+R +LT GI L D +T WR
Sbjct: 405 KDWSRADQVRDELTAMGIVLEDAAGKTSWR 434
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/397 (43%), Positives = 228/397 (57%), Gaps = 47/397 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L PP+++PR + H+E + MI +++ AY GDV++AV + P YG+LSG+ L
Sbjct: 101 AALGVEPPSWEPRATRHVEDMIAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAGERV VD K +P DF LWKAAK GEP WDSPWGPGRPGWHIECSAM HYL
Sbjct: 161 DELRAGERVIVDPHKNDPLDFVLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YWMHNG V N+EKMSKSLGNFFT+R+I
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEGAHGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P +R F++ AHYRSPLNY+ +QL+ A A+ +Y L+ EV
Sbjct: 281 LAHFQPEVVRFFILRAHYRSPLNYADMQLEDAGRALDRLYTALKGIEVH----------- 329
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ D + F M+DD NT L F + + +N K + P+ ++
Sbjct: 330 --DEVEIDWDDPYASRFREAMNDDFNTPEALAVLFD-----LATEVN--KTRLPR--DIA 378
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQLIEE 355
L+++L +LGL LQQ K ++A+ E V QLI++
Sbjct: 379 LMKALGG----------VLGL---------LQQDPWKYFQQADSEDPAFAPEKVEQLIQQ 419
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AR NKD+ ++D+IR +L I L D T WR
Sbjct: 420 RLVARANKDYREADRIRKELMEANIILEDGPHGTTWR 456
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/392 (45%), Positives = 227/392 (57%), Gaps = 34/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR ++ ++ I MI +I AYV GDVF+AV PNYGRLSG+ L+
Sbjct: 103 LGVLPPDHEPRATESIDDILAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGER+ VD KR+P DF LWK+AK GEP W SPWGPGRPGWHIECSAMS L + FD
Sbjct: 163 LRAGERIEVDEAKRDPLDFVLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+YWMHNG V N EKMSKSLGNFFT+R+I
Sbjct: 223 IHGGGMDLQFPHHENEIAQSEGATGEHFVNYWMHNGFVRINEEKMSKSLGNFFTVREILA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY P +R F++++HYRSPLNYS LD A+ A+ +Y L+ L P
Sbjct: 283 RYRPEVVRFFILNSHYRSPLNYSDENLDEAAAALSRLYTALRGLAPDL-PL--------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P ED F M DD NT + F D + IN K + +L
Sbjct: 333 -PLGEDRDEGFSSRFADAMQDDFNTPEAIAVLF-DLAREINR-----HKAAEPAKAAALG 385
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+L+ + N +LGLL P AY K A + L++ D+ I R AR
Sbjct: 386 ATLKSLGN-------VLGLLQTDPEAY------FKSDA-GGSGLSDADIETRIRARLEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K++++SD+IR +L +GI L D T WR
Sbjct: 432 KAKNWAESDRIRDELKAQGIILEDSAAGTTWR 463
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 234/384 (60%), Gaps = 23/384 (5%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H++ I +I++II N AY+++G+V+F V+ PNYG+LSGQ LE +AG R+
Sbjct: 110 TVHPKATEHIDDIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKR+P DF LWKA K GEP WDSPWG GRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDERKRHPLDFVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQ+ AA V +W+HNG++ N EKMSKSLGN +R+I + + PLA+
Sbjct: 230 LIFPHHENEIAQAEAATGKQFVRFWIHNGYLLINKEKMSKSLGNILNVREIRKNFQPLAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAED 248
R F+++AHYRSPL++S L A+ ++ Q L++C L + E + + ED
Sbjct: 290 RLFILAAHYRSPLDFSDDSLIQATKSL----QRLRNCYSDLLFYMERSQEKNTPDTWLED 345
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+N F + DD NT+ L GA + ++ +N N LK+ + +Q +L K
Sbjct: 346 VVNNGYKRFCNALDDDFNTAGAL-GAVFEVVRDLN---NYLKENETLDKQ-----ALIKS 396
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
++ + V ILG++ E L+ ++ LI+ER AARK +DF+++
Sbjct: 397 KDFFETVENILGVIGINTIGEEFA---------GTLSSSEIEGLIKEREAARKKRDFARA 447
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D IR +L KGI L D T W+
Sbjct: 448 DAIRNELASKGIILEDTPLGTRWK 471
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/383 (44%), Positives = 229/383 (59%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + I ++I I++ AY VEGDV+F V+ P YG LS Q LE ++G RV
Sbjct: 110 TVHPRATEEIPAILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARV 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKR+P DFALWKA K GEP+W SPWG GRPGWH+ECSAMS +L D HGGG D
Sbjct: 170 EVDPRKRHPLDFALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA V YW+HNG++ + EKMSKSLGNF T R+ +R+ PLA+
Sbjct: 230 LIFPHHENEIAQSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFLTAREARKRFPPLAI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S L A+ A + + E AL +A + A
Sbjct: 290 RLFMLSAHYRSPINFSEEGLMQATAAQERLRNGWTELEFALG---HRSASAEPDGALRRM 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + R+ F A + DDLNT+ + G D +K +NSSL ++P L + +
Sbjct: 347 LREGRERFLAALDDDLNTAGAI-GVVFDVVKGVNSSLG----ERP-DADLEALGQAKTFF 400
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
EV+++L ILG+ P E EEDV +LI+ER AARK +DF+++D
Sbjct: 401 LEVEDILGILGVAP------------------EESLEEDVDRLIQERQAARKGRDFARAD 442
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR +L +GI L D + W+
Sbjct: 443 AIRDELLARGILLEDTPQGPRWK 465
>gi|333922423|ref|YP_004496003.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747984|gb|AEF93091.1| cysteinyl-tRNA synthetase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 486
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/390 (44%), Positives = 229/390 (58%), Gaps = 9/390 (2%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P+VS+H+++I D+I + AY V+GDV+FAV P YG+LSG+ LE+
Sbjct: 102 LNVLRADVHPKVSEHIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRDLEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWKAAK GEPSW+SPWGPGRPGWHIECSAM+ YL FDI
Sbjct: 162 QAGARVEVDVRKKDPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS A+C YWMHNG +T N EKMSKSLGNFF +R+I ++
Sbjct: 222 HGGGFDLIFPHHENEIAQSEASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILDK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R FL+S HYRSPL++ +L A + I ++ AL GK A
Sbjct: 282 FPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDA 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL-NMLKKKQPKQQQLSLI 302
+ + LR EF M DD NT+ ++ F + K IN + N+ P +QL
Sbjct: 342 ARFKGKLAALRSEFEQAMDDDFNTALAIS-VFFELSKEINILVGNLGGVVTPAARQL--- 397
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L VK+ +LG+L S L L + K +L + V +I+ R AR
Sbjct: 398 --LADAHALVKDFNYVLGILKEDQTSGRL--LLEAPAKDDKLVDALVQLIIKIRQEARGK 453
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D IR L GI L D + W+
Sbjct: 454 KDWATADAIRDGLKELGIILEDTPQGVRWK 483
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 237/404 (58%), Gaps = 24/404 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L PT PR ++H+ ++ ++I+++ AY V+G+V++AVE+ P YG+LSG++L
Sbjct: 157 MDRLGVLRPTVTPRATEHIGEMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKL 216
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG R+ V+ K NP DFALWKA+K EP+WDSPWGPGRPGWHIECS MS YL
Sbjct: 217 EDMMAGARIDVNEHKNNPMDFALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDT 276
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS + W+HNG V N+EKMSKSLGN FTI+++
Sbjct: 277 FDIHGGGEDLVFPHHENEIAQSEGVTGKPLANIWIHNGFVKINSEKMSKSLGNVFTIQEM 336
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL---------- 230
RYH +R F++ +HYRS +++S L A + Y TL+ + L
Sbjct: 337 LTRYHAEVIRLFMLQSHYRSAVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPI 396
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
SP GKTA + + L D F M DDLNT+ + G DA + IN + K
Sbjct: 397 SPETLTGKTAELYAH----VQGLPDRFVEAMDDDLNTARAI-GYLFDAARQINGFIRDAK 451
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEED 348
+ K+ L + + I K++ +LGL P Y Q +++ +++ L +
Sbjct: 452 MAKSKEGWKVLALAGKSI----KDLGYVLGLFQENPDVY---FLQDREREIRKRGLEPAE 504
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ LI +R AAR +KD+ K+D+IR LT KGI L D T W+
Sbjct: 505 IELLIADRWAARNDKDWHKADEIRQLLTEKGIVLKDTPTGTTWK 548
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 227/394 (57%), Gaps = 42/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L LPPT++PR + H+ + MI Q+I N AY GDV++AV + YG+LSG+ L
Sbjct: 103 AALGLLPPTHEPRATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAGERV VD KR+P DF LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L
Sbjct: 163 DKLRAGERVEVDPNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YW+HNG + + EKMSKSLGNFFTIR +
Sbjct: 223 FDIHGGGEDLQFPHHENEIAQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGK 238
+ + +R F++ +HYRSP+NY+ L+ A + +Y L+ E+ S + H
Sbjct: 283 LQHFDGEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAY 342
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
AR F A M DD TS + F+ + +N K + P+ +
Sbjct: 343 AAR---------------FKAAMDDDFGTSEAVAVLFE-----LAGEVN--KSRDPQLAR 380
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +K++ +LGLL EV Q + EL+ E V LI+ R
Sbjct: 381 L------------LKDLGGVLGLLTRD--PEVFLQ---GGVGEGELSAEQVEALIQARKD 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD+++SD+IR +LT KGI L D TIWR
Sbjct: 424 ARAAKDWAESDRIRDELTAKGIVLEDGAGGTIWR 457
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 227/394 (57%), Gaps = 42/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L LPPT++PR + H+ + MI Q+I N AY GDV++AV + YG+LSG+ L
Sbjct: 101 AALGLLPPTHEPRATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAGERV VD KR+P DF LWKAAK GEPSWDSPWG GRPGWHIECS MS H+L
Sbjct: 161 DKLRAGERVEVDPNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YW+HNG + + EKMSKSLGNFFTIR +
Sbjct: 221 FDIHGGGEDLQFPHHENEIAQSEGAHGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGK 238
+ + +R F++ +HYRSP+NY+ L+ A + +Y L+ E+ S + H
Sbjct: 281 LQHFDGEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAY 340
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
AR F A M DD TS + F+ + +N K + P+ +
Sbjct: 341 AAR---------------FKAAMDDDFGTSEAVAVLFE-----LAGEVN--KSRDPQLAR 378
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +K++ +LGLL EV Q + EL+ E V LI+ R
Sbjct: 379 L------------LKDLGGVLGLLTRD--PEVFLQ---GGVGEGELSAEQVEALIQARKD 421
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD+++SD+IR +LT KGI L D TIWR
Sbjct: 422 ARAAKDWAESDRIRDELTAKGIVLEDGAGGTIWR 455
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 228/395 (57%), Gaps = 18/395 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
MA L LPP+++PR ++H+ ++ I ++ AY +EG DV FAVE YG+LS +
Sbjct: 101 MAALDVLPPSHEPRATEHIAEMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE+ +AG RV VD RK+NP DF LWKA+K GEPSWDSP GPGRPGWHIEC+AMS YL
Sbjct: 161 LEDMQAGARVEVDPRKKNPMDFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQ 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQ A YW+HNG V N+EKMSKSLGNFFTI+
Sbjct: 221 TFDIHGGGEDLVFPHHENEIAQGEACTGHPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKD 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHG 237
I + P ALR FL+S HYRSPL++S + A + +Y LQ + A P G
Sbjct: 281 ILKITRPEALRLFLLSKHYRSPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAG 340
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ AAE I L DEF A M DD NT+ + F + N L +
Sbjct: 341 QAL----AAE--IQALADEFEAGMDDDFNTARAIGALFG-----LARLGNKLAAEPDGPA 389
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ L+E + E+ L +L + P +E + + + + D+ LI +R
Sbjct: 390 KGPLLELCARRLRELGGRLGLLRIDP----AEFFRGAAGQTATQGGVGAADIEALIAQRN 445
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK+K+F+++D+IR L G+ L D + T WR
Sbjct: 446 QARKDKNFAEADRIRDQLKAMGVTLQDSPQGTTWR 480
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 173/400 (43%), Positives = 230/400 (57%), Gaps = 30/400 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PT+QP+ ++H+ +I ++ +I+ AY DVF+ V++ Y +LS + L
Sbjct: 101 MARLMLQLPTFQPKATEHIPEIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG R+ VD RK +P DFALWK AK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 161 EDMQAGARIDVDERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQS AA V YW+HNG V N+EKMSKSLGNFFTI++I
Sbjct: 221 LDIHGGGKDLIFPHHENEIAQSEAASGKPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y LR FL+SAHYRSP+++S L A + IY+ AL+ E +
Sbjct: 281 LESYDAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYK-------ALAGIYERLASG 333
Query: 241 RINPAAEDC------INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
PA D + F M DD NT+ L G D ++ IN L
Sbjct: 334 ANTPAGADNAEFVEKVAGFAGRFGDAMDDDFNTALAL-GHLFDLVRVINREL-------- 384
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQL 352
L+E + EV ++ +LG+ P A+ LQ++KD+ E++ E++ L
Sbjct: 385 PTASTGLLEQAKA---EVAKMAAVLGICDSVPAAF---LQRMKDRKTSDIEMSAEEIEAL 438
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I ERA ARK K+F + D+IR L K I L+D + T W+
Sbjct: 439 IAERAEARKAKNFKRGDEIRDLLLEKNIVLLDSAQGTTWK 478
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 234/394 (59%), Gaps = 11/394 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M L L PT +P+ ++H+ I D I +I+ AY VEG DV+F+++ YG+LSG+
Sbjct: 101 MDALNVLRPTVEPKATEHIRHIIDFIQMLIDKGKAYPVEGGDVYFSIDSFKEYGKLSGRN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
++ RAG R+AVD +K++P DF+LWK AK GEP W+SPWG GRPGWHIECSAMS YL
Sbjct: 161 PDDMRAGARIAVDDKKKSPLDFSLWKPAKPGEPCWESPWGKGRPGWHIECSAMSYEYLGE 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENE+AQS A V YW+HNG V NNEKMSKSLGNF I++
Sbjct: 221 GFDIHGGGKDLIFPHHENELAQSEAVFGRQFVKYWIHNGFVDINNEKMSKSLGNFTMIKE 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGK 238
+ + Y P +R FL+S HYRSP++YS + S + IY L+ E A +S ++
Sbjct: 281 VLDTYSPEVIRMFLLSNHYRSPIDYSEDSMREVSMGLDRIYAFLERLENAGVSLYESQLD 340
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+RI+ + + +L ++F A M+DD N++ + F+ K N L
Sbjct: 341 GSRIDGSRK---GELWNDFCAAMNDDFNSAKAIACVFEAVKKG-----NRLLDDANDSPG 392
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L+E+L N++ + +LG+ + S + K+K + + + I+ER
Sbjct: 393 ADLLETLNLFYNDIHAISNVLGIFLLDSKS-YFKAKKEKGMADMAIDPAQIEAFIQERVD 451
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKNKDF+++D+IR L + L D + T WR
Sbjct: 452 ARKNKDFARADEIRDHLQSINVVLEDGPQGTTWR 485
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 233/388 (60%), Gaps = 29/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+H+ I + ++INN YVV+GDV++ VE+ +YG LSG++L++ AG RV VD
Sbjct: 113 PRVSEHIPDIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVD 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWK+AK GEPSWDSPWG GRPGWHIECS MS YL + D HGGG DLIF
Sbjct: 173 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIF 232
Query: 133 PHHENEIAQSCAACQ-DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A V YW+HNG +T N EKMSKSLGNF T+ + + Y P +R+
Sbjct: 233 PHHENEIAQSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLLKEYEPETIRY 292
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE---- 247
F+++ HYRSPL++S +L A ++L+ A + QE + + P AE
Sbjct: 293 FILNTHYRSPLDFSQERLAEAG-------RSLERLRTAQNNLQEIQQVITVGPDAESLAL 345
Query: 248 -DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
D + +LR F MSDD NTS ++ F A K IN N + K+ L+E
Sbjct: 346 RDKVEELRKGFFDAMSDDFNTSLAISYLFALA-KEINVYHNAIISG-AKKPDGKLVE--- 400
Query: 307 KIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+I+ KE++ ++G+L P A E ++A ++ IEER AARK +D
Sbjct: 401 QIDKAWKEMIGVIGILENQPAANGEGGAVSNEEA---------EIAARIEERQAARKARD 451
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
F+K+D IR +L KGI L D + W+
Sbjct: 452 FAKADAIRDELAAKGIILEDTPQGVRWK 479
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 225/390 (57%), Gaps = 29/390 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L LPPT++PR + H++ I MI Q++ AY D+++AV +YG+LSG++LE+
Sbjct: 103 LNILPPTHEPRATQHIQPILHMIEQLLAKGHAYQASNQDIYYAVNSFKDYGKLSGRQLED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV D KR+P DF LWK AK GEPSWDSPWG GRPGWHIECSAMS YL FD
Sbjct: 163 LRAGARVEPDEAKRDPLDFVLWKRAKPGEPSWDSPWGLGRPGWHIECSAMSGSYLGQHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A+ + V+YWMHNG V N EKMSKSLGNFFT+R+I
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEASHDCTYVNYWMHNGFVRVNEEKMSKSLGNFFTVREILA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R+F++ +HY+SPLNY QL+ A +A+ +Y L+ + +
Sbjct: 283 RYQAEEVRYFILGSHYKSPLNYGDEQLEQARNALTRLYTALRGLD----------RQPPT 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ +D R FHA M DD NT L F+ + +N ++ + P Q L
Sbjct: 333 TQSEQDQTQAYRQRFHAAMDDDFNTPEALAVLFE-----LAHEINRVRSQDPAYAQY-LA 386
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L ++ ILGLL S + + +++ LI +R AR +
Sbjct: 387 ATLYQLGG-------ILGLLTQDPQSYLQSGSGSDTIDASQIET-----LIAQRLQARAD 434
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ ++D+IR L +GI L D G T WR
Sbjct: 435 KDWPEADRIRDHLKTQGIILEDSGNTTTWR 464
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 232/392 (59%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + HM++I MI ++I+N AY VE GDV++ V P+YG+LSG+ +++
Sbjct: 103 LGVLPPDDEPRATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV VD KR+P DFALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FD
Sbjct: 163 LESGARVEVDEIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A S V YWMHNG V N+EKMSKSLGNFFT+R+I +
Sbjct: 223 IHGGGADLTFPHHENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R+F++++ YRSPLNY L++A A+ Y L+ + +
Sbjct: 283 RYRAEEVRYFILTSQYRSPLNYDEEHLENARAALTRFYTALRGLD-------------EV 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + FHA M DD NT L F D ++ IN + + +
Sbjct: 330 EPAGGEA---FIERFHAVMDDDFNTPEALAVLF-DMVREIN------------RLRETGA 373
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ E++++ +LG+L P AY LK L++ D+ LI++R AR
Sbjct: 374 AKAAGLGAELRQLGGVLGILQDDPEAY------LKGGVGAEGGLSDADIDALIQQRLDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++++D+IR +L GI L D + T WR
Sbjct: 428 AEKNWAEADRIRDELQAAGILLEDGPQGTSWR 459
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 234/393 (59%), Gaps = 21/393 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L P Y PR +++++ + + ++I AY GDV+F V +YG+LS + L
Sbjct: 100 MDKLNILRPDYTPRATEYIDGMIKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AG RV V+ K +P DFALWK +K GEP WDSPWG GRPGWHIECS MSA L
Sbjct: 160 DDLLAGARVDVNEIKEDPLDFALWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIP 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA YW+HNG V N EKMSKSLGNFFTIR +
Sbjct: 220 FDIHGGGKDLIFPHHENEIAQSEAAEGKEFARYWIHNGFVNINKEKMSKSLGNFFTIRDV 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P LR FL++ HYRSPL++S L A +A+ IY + + E A+ ++ +
Sbjct: 280 LKEVDPEVLRFFLLTTHYRSPLDFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKG 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+I ++ +++ + +F M DD NT+ ++ F+ + +N+L ++ + L+
Sbjct: 340 KI----DEIVDRFKRDFEESMDDDFNTASAISNIFE-----LIKGVNLLLSERLNSEDLN 390
Query: 301 LIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
++ + E EVK ++R +LG+L A L + E ++ +LIEER A
Sbjct: 391 YLKV--RFE-EVKAIIRDVLGILTKTASEWFKMNLS--------IDESELQKLIEEREIA 439
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+NKDFSK+D IR +L KG+ L+D T +R
Sbjct: 440 RRNKDFSKADAIRNELKTKGVELLDTPTGTKFR 472
>gi|375335611|ref|ZP_09776955.1| cysteinyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
Length = 366
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 167/385 (43%), Positives = 225/385 (58%), Gaps = 34/385 (8%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P+ + H++ I +++ +I+N AYV GDV F+++ +YGRLSGQ+LE+ +AG
Sbjct: 13 PDIEPKATAHIDDIINLVQTLIDNGNAYVASNGDVMFSIDSFKDYGRLSGQKLEDLKAGI 72
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KRNP DF LWK +K GEP W+SPWG GRPGWHIECSAM++HYL FDIHGGG
Sbjct: 73 RVNVEEAKRNPYDFVLWKMSKPGEPMWESPWGQGRPGWHIECSAMNSHYLGKVFDIHGGG 132
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQSC A V YWMH+G V N EKMSKSLGNFFTIR + +Y
Sbjct: 133 SDLMFPHHENEIAQSCCAWHTDYVKYWMHSGMVMINKEKMSKSLGNFFTIRDLLAKYDGE 192
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
LR+FL+SA YR LNYSV ++ + A+ +Y L+D ++P
Sbjct: 193 TLRYFLLSAQYRGQLNYSVENIEQSRAALQRLYTALRDLPEGVAPTD------------- 239
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT + F+ I +N+L++ + +L LRK
Sbjct: 240 ---TDYEKRFKEAMDDDFNTPLTYSIFFE-----IAKEINLLRESDITKAA-NLGALLRK 290
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ +LGLL A S L+ + +L + LI+ER ARKNKD+++
Sbjct: 291 LAG-------VLGLLTHDASS----YLQGASGADDDLDVSKIEALIQERQEARKNKDWAR 339
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+ R +LT GI L D + TIWR
Sbjct: 340 ADKARDELTAMGIVLEDGAQGTIWR 364
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 239/393 (60%), Gaps = 38/393 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++ M +I MI +I+ AY + GDV++ V + YG+LSG+ +E+
Sbjct: 103 LGVLRPDIEPKATESMTEILAMIETLISKGLAYKADNGDVYYDVSQFNGYGKLSGRNIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGER+AV+ K +P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMSAH L +FD
Sbjct: 163 LRAGERIAVNEAKTDPLDFVLWKAAKAGEPAWESPWGEGRPGWHIECSAMSAHCLGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y A+R+F++S+HYRSPLNY+ QL+ A A+ Y TL++ + T ++
Sbjct: 283 QYPAEAIRYFILSSHYRSPLNYAEDQLEQAKAALTRFYTTLREVDT----------TQKV 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
N ++ + F A M DD NT+ L+ D + IN + ++Q + + ++ +
Sbjct: 333 NWQDDE---EFGGRFKAAMDDDFNTALALS-VMADVRQAINKA-----REQAQSEAVAYL 383
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE---DVLQLIEERAAA 359
L + +LGL QQ DK L +++ D+ L+ ER A
Sbjct: 384 AGL------LSSFGDVLGL---------FQQDADKFLTGDSSSDQLAVDIDSLVAERNQA 428
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K+++++D+IR LT GI L D +T WR
Sbjct: 429 RADKNWARADEIRDQLTEMGIVLEDAAGKTSWR 461
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 233/396 (58%), Gaps = 19/396 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L +PR +D++E + +M +++ AY GDV+F+V+ P YG LSG+ L
Sbjct: 101 MGKLGVLKADVEPRATDYVEDMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAG RVAVD RKR+P DF LWK+AK GEP W SPWGPGRPGWH+ECS MS +L
Sbjct: 161 EDMRAGSRVAVDDRKRHPMDFVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENE AQS A YW+HNG VT +EKMSKSLGNF TIR
Sbjct: 221 FDIHGGGRDLLFPHHENERAQSMCANDGEFARYWVHNGFVTVESEKMSKSLGNFLTIRDA 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++YHP LR FL+S HYRSPL++S + + + IY+ LQ L P + KT
Sbjct: 281 LKKYHPEVLRLFLLSKHYRSPLDFSAKDVANLQSGLVRIYRMLQRLNDLLGP-GDGEKT- 338
Query: 241 RINPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ED ++ EF+ + M DDLNT+ L F D ++ +N ++ +
Sbjct: 339 -----SEDSLSGASGEFYEKFCEMMDDDLNTAGALGLVF-DKVREMNRLMDPDGNGAVSE 392
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ LS ++S R +++ ILGL +E +QL A ++ +++ L+++R
Sbjct: 393 KALSSLKSQR---DQLLRAGEILGLFQQNP-AEFFEQL---ASPSKDVNTDEIEALVKKR 445
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ AR KD++ SD IR L G+ L D + T WR
Sbjct: 446 SQARVAKDWALSDTIRDQLKEMGVVLEDGPQGTTWR 481
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 232/392 (59%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + HM++I MI ++I+N AY VE GDV++ V P+YG+LSG+ +++
Sbjct: 124 LGVLPPDDEPRATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSGKSIDD 183
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV VD KR+P DFALWK+AK GEP+WDSPWG GRPGWHIECSAMS L FD
Sbjct: 184 LESGARVEVDEIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCALGDSFD 243
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A S V YWMHNG V N+EKMSKSLGNFFT+R+I +
Sbjct: 244 IHGGGADLTFPHHENEIAQSEGATGHSFVKYWMHNGFVRINDEKMSKSLGNFFTVREILQ 303
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R+F++++ YRSPLNY L++A A+ Y L+ + +
Sbjct: 304 RYRAEEVRYFILTSQYRSPLNYDEEHLENARAALTRFYTALRGLD-------------EV 350
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + FHA M DD NT L F D ++ IN + + +
Sbjct: 351 EPAGGEA---FIERFHAVMDDDFNTPEALAVLF-DMVREIN------------RLRETGA 394
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ E++++ +LG+L P AY LK L++ D+ LI++R AR
Sbjct: 395 AKAAGLGAELRQLGGVLGILQDDPEAY------LKGGVGAEGGLSDADIDALIQQRLDAR 448
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++++D+IR +L GI L D + T WR
Sbjct: 449 AEKNWAEADRIRDELQAAGILLEDGPQGTSWR 480
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 30/381 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPNEKKEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V+ NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAA 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I L+ +F M DDLNT+ TG + ++ IN+ N K E+L ++
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFVK 392
Query: 310 NEVKEVLRILGLLPP-GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ +KE+ ILG+L GA E + Q ++L+L+E+R ARK K+F+++
Sbjct: 393 DTLKELCSILGILEQYGAKEEAIPQ--------------EILELVEKRNQARKAKNFAEA 438
Query: 369 DQIRADLTRKGIALMDMGKET 389
D+IR +L G ++D + T
Sbjct: 439 DRIRDELKSLGYIVLDTPQGT 459
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 221/383 (57%), Gaps = 23/383 (6%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PRVSDH+ +I ++I+ +I+ AY EGDV+FAV K P YG+LSG++L RAG RV
Sbjct: 111 HPRVSDHLPEIVELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEP 170
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
KR+P DFALWK AK GEPSW SPWG GRPGWHIECSAM+ YL +FDIHGGG DLI
Sbjct: 171 GENKRDPLDFALWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLI 230
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS AA YW+HNG +T EKMSKSLGN F +R++ E Y P A+R
Sbjct: 231 FPHHENEIAQSEAATGRPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMELYPPPAVRL 290
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
FL+S HYRSPL Y+ L+ A+ A+ L+ + L Q+ + + ++
Sbjct: 291 FLLSTHYRSPLAYTPEYLEGAAKAL----SRLRSSWLFLQEAQKQAEESSGGTEQLARLD 346
Query: 252 KLRDEFHARMSDDLNTSHILTGAFQDALKFINS--SLNMLKKKQPKQQQLSLIESLRKIE 309
K +F A M DD NT+ L F D INS L L ++ L L S
Sbjct: 347 KWEQDFTAAMDDDFNTARAL-ALFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFN--- 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
R+LGL P V++Q +R + EE V L+E R AR+ KD++ +D
Sbjct: 403 -------RVLGLFPERRGLPVVEQ------ERTMVLEELVKLLVEIRQEARQRKDWATAD 449
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L GI L D T WR
Sbjct: 450 RIRESLKNLGIVLEDTPAGTRWR 472
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 229/396 (57%), Gaps = 42/396 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPPT +PR + HM++I MI +I AYV E GDV++AV + YG+LSG+ ++
Sbjct: 103 LGILPPTDEPRATAHMDEILAMIGTLIEKGLAYVAENGDVYYAVARFAGYGKLSGKDPQD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV VD KR+P DFALWK+AK GEP+WDSPWGPGRPGWHIECSAMS L FD
Sbjct: 163 LRAGARVEVDEAKRDPLDFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTCALGHHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A ++ V+ WMHNG V N EKMSKSLGNFFT+R+I +
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGATGETFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
R+ P +R+F++++ YRSPLNY L+ A A+ +Y L+ +
Sbjct: 283 RFRPEEVRYFILTSQYRSPLNYDDEHLEQARAALTRLYTALR-------------GVPDV 329
Query: 243 NPAAED--CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
P A D + FHA M DD NT L F D ++ +N +
Sbjct: 330 APDAVDASVAAPFVERFHAAMDDDFNTPEALAVLF-DLVREVNRI-----RADDPGAAAG 383
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK-RAE---LTEEDVLQLIEER 356
LR++ ILG +LQ+ D L+ RA+ L++ ++ L++ R
Sbjct: 384 PAAVLRRLGG-------ILG---------ILQEDPDLYLRGRADDGGLSDTEIESLVQAR 427
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR KD++++D++R LT GI L D T WR
Sbjct: 428 IAARAAKDWAEADRLRKLLTEAGIGLEDGPSGTAWR 463
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/391 (42%), Positives = 226/391 (57%), Gaps = 8/391 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L P +P+ ++H+ ++ +I +I+ AY +GDV+F VE+ YG+LSG+ L
Sbjct: 101 MDALGTLRPDLEPKATEHIPEMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +AG RV V+ +K +P DF LWKAAK GEP W SPWG GRPGWHIECSAMS YL
Sbjct: 161 ADMQAGARVEVNDKKEHPMDFVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQSC A + WMH+G VT EKMSKSLGNF TIR +
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSCGASGKPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y P LR F+ S YR+PL+++ L A + +Y+ L +V P + +
Sbjct: 281 LKQYEPEVLRLFIFSTQYRNPLDFTETALHDARAGLERMYECL--AQVEDLPAEGTEGAS 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I + L D FH M +D NT+ L F D +K +N L L ++ P L+
Sbjct: 339 VITDKDRTALASLVDRFHQAMDNDFNTAQALAHLF-DTVKLLNKVLRTLPER-PAAADLN 396
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L LR E +E+ +LGL+ +EV+ + K L +L EE + LI +R AR
Sbjct: 397 L---LRTTAAEFRELAGVLGLVQRNP-AEVVAGNRAKILAGIDLDEETINGLITKRNQAR 452
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
KD+S SD++R L I L D + T W
Sbjct: 453 AAKDWSTSDEVRDYLLEHRIVLKDSPEGTTW 483
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 230/393 (58%), Gaps = 39/393 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + + I MI +++ D AYV GDVF+AV K +YGRLSG+ L++
Sbjct: 133 LAVLPPDLEPRATQSIADIISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDD 192
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AGERV VD KRNP DF LWK AKA EP+WDSPWG GRPGWHIECSAMS L + FD
Sbjct: 193 LQAGERVDVDLAKRNPMDFVLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFD 252
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMHNG V ++EKMSKSLGNFFT+R++
Sbjct: 253 IHGGGMDLQFPHHENEIAQSEGATGEKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLN 312
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y P +R F++S+HYRSPLNYS QL+ A A+ +Y L+ E E R
Sbjct: 313 QYKPEIIRFFILSSHYRSPLNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTR- 371
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
F M DD NT L F D + +N + K+ +Q+ +L
Sbjct: 372 --------------FEQAMDDDFNTPVALAVLF-DLARDLNKA-----KELDQQKACALA 411
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+L+ + +LG+L P A+ L+ D A+ L EE V Q I+ R A+
Sbjct: 412 ATLKYLSG-------LLGILQDDPDAF---LKGSGDAAV----LGEETVEQQIQARLDAK 457
Query: 361 KNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
K KD++ +D+IR DL +G+ L D T WR
Sbjct: 458 KAKDWALADKIRNDLKEQGVILEDSPDGTTSWR 490
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 218/379 (57%), Gaps = 36/379 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
PTY PR +++++ I DMI +++ AYVV+GDV+F K YG+LSG RLE+ G R
Sbjct: 107 PTYAPRATENIDAIIDMIKTLVDKGYAYVVDGDVYFKTSKFEEYGKLSGHRLEDLELGAR 166
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
+ VD RK N DFALWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG
Sbjct: 167 IEVDERKENAMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMANRYLGETIDIHSGGQ 226
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS A YW+HNG + NNEKMSKS GNFFT+R I + Y
Sbjct: 227 DLIFPHHENEIAQSEACNGKPFARYWLHNGFININNEKMSKSRGNFFTVRDIAKHYDYEV 286
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
+R FL+SAHYRSP+N+S L+ A A+ IY+ + LS A + ED
Sbjct: 287 IRFFLLSAHYRSPINFSDALLEQAKSALNRIYECRDNLRFFLSK-------AEKDTFEED 339
Query: 249 CINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
L RD F M DDLNT+ L F+ ++ IN+ + K+ + L L++
Sbjct: 340 IYGNLDIYRDRFIEAMEDDLNTADALAAIFE-LVREINTRITANAGKKTISKALDLLD-- 396
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
E+ +LG++ +++ +E++ LIEER AR ++F
Sbjct: 397 --------ELTGVLGIMRKEYENDL---------------DENIRALIEERQKARAERNF 433
Query: 366 SKSDQIRADLTRKGIALMD 384
++D+IR L + GI L D
Sbjct: 434 KRADEIRDQLRKMGIELQD 452
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 227/398 (57%), Gaps = 33/398 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L PTY+P+V++H+ +I +MI +I AY +GDV+F+VE P YG+LS ++
Sbjct: 100 MEALNVKEPTYKPKVTEHIREIIEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKT 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG RV +K+NP DFALWK +K GEP W+SPWG GRPGWHIECSAMS YL
Sbjct: 160 EELLAGARVEPGEKKKNPLDFALWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGET 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQS + + YW+HNG V N EKMSKSLGNFFTI++I
Sbjct: 220 IDIHGGGFDLIFPHHENEIAQSESYTGKTFARYWIHNGFVMVNREKMSKSLGNFFTIKEI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+++ P LR FL+S HYRSP++++V +L A A+ + ++ + +E K
Sbjct: 280 LKQFSPDTLRLFLLSTHYRSPIDFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGE 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 299
I+ + R EF A M DD NT+ L GA + +K N LK K K+Q++
Sbjct: 340 PID------VESARREFEAAMDDDFNTAKAL-GALYELVK----RANTLKDKALKRQKIT 388
Query: 300 -----SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
SL+++ R EN L+ LG SE L E + LI+
Sbjct: 389 PSERESLVDAARFTEN----ALKTLGFKLEREQSE------------GGLEEALIELLIQ 432
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R RK K+F +D IR L GI L D+ T++R
Sbjct: 433 VRGELRKKKEFQLADLIRDRLKELGITLEDLPTGTVYR 470
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 225/386 (58%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++H++ I + I +I+ AYVV+G+V+F K +YG+LS + ++ AG RV
Sbjct: 108 TVHPRATEHIDDIIEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+D +K+NP DFALWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EIDEKKKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA YWMH G++ NNEKMSKS GNFFT+R++TE+Y P L
Sbjct: 228 LIFPHHENEIAQSEAAYDQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTEKYDPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYRSP+N+S+ LD A A Y+ L + V L K ++ +D
Sbjct: 288 RLFMLMAHYRSPINFSLDLLDQAKSA----YERLSNAVVNLKHLANITKDRELSDEEKDL 343
Query: 250 INKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
I K + +F M DD NT+ ++ F+ A K N++L+ K+ + L + L
Sbjct: 344 IVKFDEYKKQFEEAMDDDFNTADAISVLFEMA-KTANANLSGNSSKKLVEYILEMFLKLS 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+LGL A +E+ +E++L+LIEER ARK K++
Sbjct: 403 D----------VLGLSYKNAETEI--------------EDEEILRLIEERQKARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L +GI L D + W+
Sbjct: 439 LADEIRDKLKERGIILEDTPEGVRWK 464
>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
Length = 364
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 230/393 (58%), Gaps = 41/393 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L CL P PR +++++Q+++MI ++N AY GDV+F VEK NYGRLSG++L+
Sbjct: 7 NLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRLSGRKLD 66
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L +
Sbjct: 67 DMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGN 126
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 127 HFDIHGGGSDLLFPHHENEIAQSEAATDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRD 186
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ E++HP +R+F++S+HYRS +++S L A F ++ + + K+
Sbjct: 187 VMEKFHPEVIRYFIVSSHYRSRVDFSDFALKEAK-LRFLVF---------IMHLKRINKS 236
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
I P M DD NTS + F+ I LN K++ Q
Sbjct: 237 MAIKP-------------QTSMRDDFNTSEAIAVLFE-----IIKELNRAVKEENAAQST 278
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E D+ I++R A
Sbjct: 279 LYYSTLRHLTN-------ILGLVQYNVDDFLKSDIGQEALG---LSEADIEDFIQQRVDA 328
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+KNKDF+++D+IR L +G+ L D + TIWR
Sbjct: 329 KKNKDFARADEIRQSLLAQGVVLEDTRQGTIWR 361
>gi|406928420|gb|EKD64226.1| hypothetical protein ACD_51C00046G0015 [uncultured bacterium]
Length = 462
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/389 (41%), Positives = 233/389 (59%), Gaps = 32/389 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L+ P QP+ + ++ Q+ ++I ++I AY +E V++ VEK +YG+LSGQ +
Sbjct: 104 LKIDKPDTQPKATQYIPQMIELIKKLIEKGYAYELEDGVYYEVEKFAHYGKLSGQNQDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ D +KR+P DF LWK AK EPSW SPWG GRPGWHIECSAMS L FDI
Sbjct: 164 KAGARIEKDDKKRHPHDFVLWKKAKPDEPSWPSPWGEGRPGWHIECSAMSMDLLGETFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DLIFPHHE+EIAQS AA S V YW+HNG +T NNEKMSKSLGNFFT+++I +
Sbjct: 224 HGGGMDLIFPHHEDEIAQSEAATGKSYVKYWLHNGFITINNEKMSKSLGNFFTLKEIFAK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y+P +R+ +I HYRSP+N+S LD + +A+ ++D + L ++ +T++ +
Sbjct: 284 YNPNTVRYMIIGTHYRSPINFSHELLDQSENAL----SRIKDFLINLKNYK--NETSKSS 337
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
PA + + +F RM DD +T+ L GA + +K +N + K L+ +
Sbjct: 338 PALKKTLENAIKDFEKRMDDDFDTAGGL-GALYNLIKEVNILM--------KNGDLAETD 388
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
KIE +K++ +L +LP S +V I+ R ARKNK
Sbjct: 389 K-EKIETTLKKIDSVLCILPEVETS----------------VNPEVENAIKARTDARKNK 431
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
DF+ +D+IR DL +GI L D + TIW+
Sbjct: 432 DFALADKIRKDLESQGIILEDTPQGTIWK 460
>gi|410447884|ref|ZP_11301976.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
gi|409979464|gb|EKO36226.1| cysteine--tRNA ligase [SAR86 cluster bacterium SAR86E]
Length = 426
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/385 (45%), Positives = 226/385 (58%), Gaps = 40/385 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
PT++PR +DH+E + MI +I+ AY GDVFFAV P YG+LS + +++ G
Sbjct: 79 PTHEPRATDHIEGMIKMIGTLIDKGHAYHSAGGDVFFAVRTFPEYGKLSNKNIDDLNPGS 138
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+A D K++P DF LWK+AK EPSWDSPWGPGRPGWHIECS MS L FDIHGGG
Sbjct: 139 RIAEDESKKDPLDFVLWKSAKPNEPSWDSPWGPGRPGWHIECSVMSLENLGKHFDIHGGG 198
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A +YWMH+G + N EKMSKSLGNF ++ + YHP
Sbjct: 199 PDLLFPHHENEIAQSECASDHKFANYWMHSGLLKINGEKMSKSLGNFAMLKDLFVSYHPE 258
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R++LIS+HY+S LN+ LD A A+ +YQ +L P QE + E
Sbjct: 259 VIRYYLISSHYKSSLNFDSDSLDQARSALTRLYQA-----ASLVPLQE-------SDLHE 306
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
D + D M+DDLNT L+ F A K INS+ Q Q Q S+ S
Sbjct: 307 DSVKGFIDS----MNDDLNTPEALSILFGLA-KSINST-------QDAQDQ-SMYAS--- 350
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+KE+ ++LGLL SE Q A+LT+E++ Q IEER AR NKDF K
Sbjct: 351 ---TMKELGKVLGLLNDS--SEAFLQYG------ADLTDEEISQKIEERNQARNNKDFLK 399
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+DQIR +L +GI L D T W+
Sbjct: 400 ADQIRDELVSQGILLDDSSDGTSWK 424
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/386 (43%), Positives = 226/386 (58%), Gaps = 34/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++ + I ++I +I AY ++GDV+F V P YG+L Q LE ++G RV
Sbjct: 110 TVNPKATEEIPHIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARV 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKR+P DFALWKA K GEP+WDSPWGPGRPGWHIECSAM H+L D HGGG D
Sbjct: 170 EVDPRKRHPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA V YW+HNG++ + EKMSKSLGNF T R + +R+ PL +
Sbjct: 230 LVFPHHENEIAQSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLMKRFPPLVI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS---PFQEHGKTARINPAA 246
R F++SAHYRSP+N+S L A A+ + AL P + R
Sbjct: 290 RLFMLSAHYRSPINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELR----- 344
Query: 247 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ I + RD+FH M DDLNT+ L GA ++ NS L+ + P + +L
Sbjct: 345 -EQIARYRDDFHRAMDDDLNTAEAL-GAVFSLIRATNSHLS--RGDSPD------LAALE 394
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ N +++V RI+G++ + + L R DV LIEER AARK +DF+
Sbjct: 395 EASNFLRDVDRIMGVI----------GIDEDQLDR------DVEALIEERNAARKARDFA 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
K+D IR L+ GI L D + T W+
Sbjct: 439 KADAIRDRLSSMGIVLEDTPQGTRWK 464
>gi|444913172|ref|ZP_21233326.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
gi|444716175|gb|ELW57030.1| Cysteinyl-tRNA synthetase [Cystobacter fuscus DSM 2262]
Length = 488
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/392 (43%), Positives = 232/392 (59%), Gaps = 18/392 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P P+VSDH+ +I +I ++++ AY +GDV+F+V + P+Y +LS + L+
Sbjct: 107 LHLLEPDVSPKVSDHIPEILRIIGKLVDKGVAYASQGDVYFSVRRYPDYAKLSKRDLDEL 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
GERV +K P DFALWKAAK GEPSWDSPWGPGRPGWHIECSAMS YL FDI
Sbjct: 167 CVGERVQPGEQKHEPLDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSERYLGETFDI 226
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DLIFPHHENE+AQS AA + YWMH G + KMSKSLGN +R+ ER
Sbjct: 227 HGGGLDLIFPHHENELAQSEAASGHTLARYWMHCGFLDLEGAKMSKSLGNVVRLREALER 286
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
ALR F +S HYR PL +S L A + Y Y+TL+ + + GK
Sbjct: 287 VDAEALRFFFLSTHYRHPLAFSDKGLADAELRMEYFYETLRKVDERVG-----GKEFAPG 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTS---HILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
P D + D F A+M DD N++ +L+G F + +N L K P + +
Sbjct: 342 PLHGDAARFMAD-FEAQMDDDFNSAGALGVLSGLF--------AMMNELVDKPPVKDKAV 392
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +LR + +V++V ILGL S +L++ +D+A+K L V QL+ RA AR
Sbjct: 393 VGRTLRALREDVRKVSGILGLFEEAPASWLLRR-RDRAVKERGLDVARVEQLMAARAEAR 451
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K KDF+++D++R +L G+ +MD T+W+
Sbjct: 452 KAKDFAEADRLRVELKSLGVEIMDTAAGTLWK 483
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/395 (44%), Positives = 231/395 (58%), Gaps = 46/395 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L P +PR +D++ ++ MI +I AY + GDV++AV +YG+LSG+ L
Sbjct: 101 ARLGVWRPDLEPRATDYIHEMIAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV VD+ KR+P DF LWKAAK GEPSWDSPWGPGRPGWHIECSAM A +L
Sbjct: 161 EDLRAGERVEVDAHKRDPMDFVLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + V+YWMHNG + ++EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEGAHGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R F++ AHYRSPLNYS LD A A+ +Y TL+ E+
Sbjct: 281 LEKYDAEVVRFFILRAHYRSPLNYSSHHLDDAKQALTRLYNTLRGRELPQLDIDWR---- 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
P AE F + DD NT F+ + S N + Q +
Sbjct: 337 --QPEAE--------RFKQALDDDFNTPEAFAVLFE-----LASEAN----RTGSAVQAA 377
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKR---AELTEEDVLQLIEERA 357
L+++L LGL LQ+ D+ LK A L+ +++ +LI ER
Sbjct: 378 LLKALAG----------QLGL---------LQRDPDEFLKGEAVAGLSPDEIERLIAERL 418
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK K+F+++D+IR LT +GI L D + T WR
Sbjct: 419 AARKCKNFAEADRIRDALTAQGIILEDTPQGTSWR 453
>gi|379335352|gb|AFD03335.1| cysteinyl-tRNA synthetase [uncultured bacterium W5-15b]
Length = 480
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 235/392 (59%), Gaps = 19/392 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA + P +P+V++H+EQI ++I II+ YV E DVFF+V K YG+LS + +
Sbjct: 106 MASIGVQTPDIEPKVTEHIEQIIELIQTIIDRGHGYVSENDVFFSVRKFKGYGKLSKRSV 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+N G R+ V+ +K++P DFALWK AK GEPSW SPWG GRPGWHIECS MS YL +
Sbjct: 166 DNMLEGVRIDVNEKKQDPLDFALWKGAKKGEPSWPSPWGNGRPGWHIECSVMSMEYLGTN 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
F+IHGGG DLIFPHHENEIAQS AA + +W+HNG + N+EKMSKSLGNFFT++
Sbjct: 226 FEIHGGGKDLIFPHHENEIAQSEAASGEQFAKHWLHNGLIQINSEKMSKSLGNFFTVQNA 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+R+ P ++R F +S HY++P ++S +D ++ IY TL+ LS +
Sbjct: 286 VKRWTPESIRFFFLSHHYQNPADFSEQVMDDTEISLERIYTTLKRAN-DLSSVSD----- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++P ++ + K R+ + M D+ NT+ + F D ++ IN S++
Sbjct: 340 SVDPELQENLEKFRENWFRAMCDNFNTADAIGNLF-DLVRAINKSIDA----------NG 388
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
++L E+K+ ++G+L E L+ K A LT E++ LIEER R
Sbjct: 389 WTKTLSDTLEEIKKFSSVVGILEKDP-DEYLEGRKSSANLEG-LTPEEIEVLIEERKQTR 446
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+KD++++D+IR +L KGI L D TIW+
Sbjct: 447 TDKDWARADEIRDELDAKGIVLEDKAGGTIWK 478
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/406 (43%), Positives = 246/406 (60%), Gaps = 29/406 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L P +PRVS H+E I +I II+N AY V+GDV+F+VE YG+LSGQ L
Sbjct: 102 MARFGVLAPDIEPRVSTHIEDIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSL 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG RV VD+RK+ PADFALWK+AK GE +WD+PWG GRPGWHIECSAMS +L
Sbjct: 162 DDLRAGARVEVDARKKAPADFALWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQT 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA-CQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS AA +D+ YWMHNG + + EKMSKSLGN F RQ
Sbjct: 222 FDIHGGGKDLVFPHHENEIAQSQAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQ 281
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVF-----------YIYQTLQDCEV 228
I + P ALR F +S HYRSP+N+ V ++D + VF Y Y TL+ +
Sbjct: 282 IADAVGPEALRFFSVSHHYRSPVNFEVDEVDGVT--VFRDLEVADRRLDYFYSTLRRLDD 339
Query: 229 ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 288
L+ ++ G+ + P A+ + R+ ++DD NT I+ A +A K N L+
Sbjct: 340 FLATGKDPGE-GEVVPEADKLVPAAREA----LADDFNTP-IVIAALGEAAKLANKLLDE 393
Query: 289 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTE 346
K PK + +L+K+ E++EV +G+L P A+ L + +++ + +
Sbjct: 394 -PKSAPKPVRR---RTLQKLARELREVGSAIGVLGSEPAAF---LGERRNRLAAKRNIDP 446
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+V L+E+RA ARK KDF+ +D +R + G+ ++D W+
Sbjct: 447 AEVATLLEQRAEARKAKDFAAADALRDQIKALGVEVLDTAHGVDWK 492
>gi|224369425|ref|YP_002603589.1| protein CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 233/396 (58%), Gaps = 25/396 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M L L PT +P+ ++H++ I D I ++I+ AY V G DVFF+++ YG+LSG+
Sbjct: 101 MDALNVLRPTIEPKATEHIQDIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
++ G R+AVD +KR+P DF LWK K GEPSW SPWG GRPGWHIECSAMS YL
Sbjct: 161 PDDMMPGSRIAVDDKKRDPKDFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGE 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS AA + V YW+HNG V NNEKMSKSLGNF I+
Sbjct: 221 SFDIHGGGKDLIFPHHENEIAQSEAAFGKTFVRYWIHNGFVDINNEKMSKSLGNFTMIKD 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + YHP +R FL+S HYRSP++Y+ +D + +Y ++ + A G T
Sbjct: 281 VLKDYHPEVMRMFLLSKHYRSPIDYNDTSMDEVISGLDRLYAFVERAQGA-------GAT 333
Query: 240 AR-INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ P E F A M DD NT+ + F D +K N L+ +Q +
Sbjct: 334 VNGVEPGKEWA------SFEAAMDDDFNTARAMATLF-DTVKTGNRILD----QQGETVS 382
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ ++ + ++K + ILG+L P Y + K+ L +L + + +LI+ER
Sbjct: 383 PETLSAVSTLCADLKRMGSILGILAQEPQDY---FRAKKESGLAGKDLDGDAIERLIQER 439
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR++K+F+++D+IRA+L I L D T W+
Sbjct: 440 VAARQSKNFARADEIRAELDAMNIVLEDGPDGTTWK 475
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 231/397 (58%), Gaps = 46/397 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + +++ I D+IT+++ AY GDV++AV K YG+LSG+R+E+
Sbjct: 103 LGVLRPDQEPRATQYIDHIIDLITRLMKRGYAYTANNGDVYYAVGKFAEYGKLSGKRIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV ++ K++P DF LWKAAK EPSW SPWG GRPGWHIECSAMS H L + FD
Sbjct: 163 LRAGERVDIEEAKQDPLDFVLWKAAKPNEPSWASPWGNGRPGWHIECSAMSTHCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMHNG V N EKMSKSLGNFFT+R + +
Sbjct: 223 IHGGGMDLQFPHHENEIAQSEGATGEQFVNVWMHNGFVRVNEEKMSKSLGNFFTLRDVLQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++ +R+F++++HYRSPLNY QLD+A A+ +Y L+ E +P ++
Sbjct: 283 KFPAEVIRYFILNSHYRSPLNYGDQQLDAAQQALTRLYTALRGLEDTGAPLDKN------ 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ-----Q 297
++ F M+DD NT+ + F ++ +N L+ Q Q
Sbjct: 337 --------SEFYQRFATAMNDDFNTAEAIAVLFD-----LSREVNRLRVDNSSQAVAVAQ 383
Query: 298 QLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
QL L+ ILG+L P A+ K + L+ + V +LI E
Sbjct: 384 QLKLLGG-------------ILGILQADPEAW------FKRENTSTNGLSNDAVEKLIAE 424
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AARK K++++SD+IR L +GI L D T WR
Sbjct: 425 RQAARKAKNWAESDRIRDMLKEQGIILEDAAGVTTWR 461
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 241/393 (61%), Gaps = 29/393 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L CL P PR +D+++Q++ MI ++ AY GDV+F VEK YGRLSG++LE
Sbjct: 104 NLGCLHPDEAPRATDYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLE 163
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L +
Sbjct: 164 DMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGN 223
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 224 HFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRD 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ +++HP +R+F++S+HYRSP+N+S + L A A+ Y + + + Q +G T
Sbjct: 284 VMDKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT 337
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+++ E L + F++ M DD NT+ + F+ +N LN K+Q +Q
Sbjct: 338 -QVDTLDE----TLLERFNSAMRDDFNTAEAIAVLFE-----VNKELNRAVKEQQTEQAA 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+EE + LI++R A
Sbjct: 388 IYYATLRHLTN-------ILGLVQHNVEEFLKSDIGQEALA---LSEEQIEDLIQQRQDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K K+F+K+D+IR L +G+ L D + TIWR
Sbjct: 438 KKAKEFAKADEIRQSLLDQGVVLEDTRQGTIWR 470
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/380 (42%), Positives = 229/380 (60%), Gaps = 28/380 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPNEKKEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDMLKAA 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I L+ +F M DDLNT+ TG + ++ IN+ N K E+L +
Sbjct: 345 IEDLKAKFIDAMEDDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAK 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ +KE+ ILG+L YSE + E +++L+L+++R ARK K+F+++D
Sbjct: 393 DTLKELCSILGILE--QYSE-----------KEEAIPQEILELVKKRNQARKAKNFAEAD 439
Query: 370 QIRADLTRKGIALMDMGKET 389
+IR +L G ++D + T
Sbjct: 440 RIRDELKSLGYIVLDTPQGT 459
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 227/393 (57%), Gaps = 22/393 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++HM+ I + + ++ AY V+F V++ +YG+LSG +L
Sbjct: 101 MEALKVKPADVYPRVTEHMDDIIEFVRKLQEKGYAYEGSDGVYFEVQRFKDYGKLSGIKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS YL
Sbjct: 161 EELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YW+H G + N EKMSKSLGNF TIR++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQTEACTGHEWVHYWLHTGFLMVNGEKMSKSLGNFVTIREM 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ERY+P +R F++ HYRSPL+Y+ ++ A + + +Y TL++ VA+ K
Sbjct: 281 LERYNPEVIRLFILQRHYRSPLDYTEEGMEHAKNNLERLYNTLENIRVAMERADIAFKWG 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A + I R++FH M DD NT+ L F+ A +N L +++K PK+ L
Sbjct: 341 PEEFEAYEAIRNAREKFHEAMDDDFNTAEALKAVFE-ASNAVNRYLTVVEK--PKESIL- 396
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAA 359
+ E R++ SEV +D ++ EE ++Q LI+ RA
Sbjct: 397 ---------RKALEFFRMV--------SEVFGIFEDYFREQRAGEEEALIQLLIDVRAQL 439
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K+F+ +D+IRA+L GI L D + T+W+
Sbjct: 440 RKEKNFALADKIRAELREMGIQLEDTPQGTVWK 472
>gi|386392194|ref|ZP_10076975.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
gi|385733072|gb|EIG53270.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. U5L]
Length = 485
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 223/385 (57%), Gaps = 9/385 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR ++++ ++ DM ++I N AY GDV+F V YG+LSG+
Sbjct: 99 MDRLGILRADAEPRATEYIAEMADMAARLIENGHAYRTPSGDVYFRVRSFAGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ R+G RVA K +P DFALWKA+K GEP WDSP+GPGRPGWH+ECS MS L
Sbjct: 159 VEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGI 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQS AA + +W+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PIDIHGGGQDLIFPHHENEIAQSEAATGNDFCRFWVHNGFVRINTEKMSKSLGNFVTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I +RY P LR FL+S+HYRSPL+YS LD A + IY E AL+ +
Sbjct: 279 IYKRYLPEVLRFFLVSSHYRSPLDYSDQALDEAEKGIKRIYAAKGQMEQALA--RAKWSE 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
R+ P + KL + F A M DDLNT+ + F + + +L K + +
Sbjct: 337 TRLPPEIGQELAKLEEGFTAAMDDDLNTAQAIGHVF----GLVRLAGRVLDDKTLAKSR- 391
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
E+LR+I ++ ILG+ + E L +LK L R + V L+ ER A
Sbjct: 392 EAAEALRRILADLDTWSGILGVFGRDS-REFLAELKASRLARLGIDAVRVDGLVAERQEA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMD 384
RK KDF++SD IR +L G+ +MD
Sbjct: 451 RKTKDFARSDAIRDELAGLGVTVMD 475
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 229/393 (58%), Gaps = 31/393 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L PPT +PR + H+++I M+ ++I + AYV + GDV++ V YGRLSG+
Sbjct: 101 ARLGVRPPTLEPRATAHIDEILAMVQRLIEREHAYVADKGDVYYQVSSFSGYGRLSGKDP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAG RV VD KR+P DF LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L +
Sbjct: 161 GDLRAGARVDVDQHKRDPLDFVLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTQCLGNH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHH+NEIAQS A + V+ WMHNG V N+EKMSKSLGNFFT+R+I
Sbjct: 221 FDIHGGGADLQFPHHDNEIAQSEGATGEPFVNIWMHNGFVRINDEKMSKSLGNFFTVREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
RY P +R+F++++HYRSPLNY L+ A A+ +Y L+ A
Sbjct: 281 LTRYRPEEIRYFILASHYRSPLNYDESNLEQARSALTRLYTALRGLPAA----------- 329
Query: 241 RINPAAE-DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
PAAE D + R F M DD NT L F + +N L+
Sbjct: 330 --EPAAEPDGGDAHRQRFTDAMDDDFNTPEALAVLFD-----LAREINRLRD-------- 374
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
S + + E++ + +LGL+ A + L+ D + ++ ++ LI+ R A
Sbjct: 375 SDLSRAAALGAELRSLGAVLGLVQDQA-DDFLRGGADAQPEGP--SDAEIENLIQRRVQA 431
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R++KDF+++D+IR L + GI L D T WR
Sbjct: 432 RQDKDFAEADRIRDQLQQAGILLEDGAGGTRWR 464
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/393 (43%), Positives = 241/393 (61%), Gaps = 29/393 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L CL P PR +D+++Q++ MI ++ AY GDV+F VEK YGRLSG++LE
Sbjct: 104 NLGCLHPDEAPRATDYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLE 163
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L +
Sbjct: 164 DMQAGASERVDVEVEKKHPFDFVLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGN 223
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 224 HFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRD 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ +++HP +R+F++S+HYRSP+N+S + L A A+ Y + + + Q +G T
Sbjct: 284 VMDKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQ------QAYGDT 337
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+++ E L + F++ M DD NT+ + F+ +N LN K+Q +Q
Sbjct: 338 -QVDTLDE----TLLERFNSAMRDDFNTAEAIAVLFE-----VNKELNRAVKEQQAEQAA 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+EE + LI++R A
Sbjct: 388 IYYATLRHLTN-------ILGLVQHNVEEFLKSDIGQEALA---LSEEQIEDLIQQRQDA 437
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K K+F+K+D+IR L +G+ L D + TIWR
Sbjct: 438 KKAKEFAKADEIRQSLLDQGVVLEDTRQGTIWR 470
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 231/391 (59%), Gaps = 35/391 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +P+ + + +I MI ++I N AYV GDVF++V K NYGRLSG+ L
Sbjct: 103 LSVLPPDIEPKATQSIPEILAMIEKLIANGIAYVGSNGDVFYSVSKFSNYGRLSGKNLAE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AGERV ++ K++P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMS L + FD
Sbjct: 163 LQAGERVEIEQAKQDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSTGCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+YWMHNG V N EKMSKSLGNFFT+R++ +
Sbjct: 223 IHGGGMDLQFPHHENEIAQSEGATGEKFVNYWMHNGFVRINEEKMSKSLGNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R F++++HYRSPLNYS LD A+ A+ +Y +L+ I
Sbjct: 283 RYRSEVVRFFILTSHYRSPLNYSNEHLDEAAVALTRLYTSLRG----------------I 326
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + F M DD NT L+ F A LN +K KQ+ L
Sbjct: 327 DAGEFEVEADYEARFREAMDDDFNTPVALSVLFDMA-----RELNKVKDSD-KQRASQLA 380
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++R + +LG+L A + LK+ + LT E + LI+ R A+KN
Sbjct: 381 ATIRGLGG-------VLGILQDDAE----RFLKEGDNQAEGLTAEQIETLIQARIDAKKN 429
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
K+++++D+IR L ++G+ L D+ G T WR
Sbjct: 430 KNWAEADKIRDQLKQQGVILEDVPGGGTNWR 460
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6.1|SYC_ANATD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 227/380 (59%), Gaps = 28/380 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPNEKKEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAA 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I +L+ +F M DDLNT+ TG + ++ IN+ N K E+L +
Sbjct: 345 IEELKAKFIDAMEDDLNTAEA-TGYLFEMVREINTYANSCSK-----------ETLTFAK 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ +KE+ ILG+L + E E + +L+L+E+R ARK K+F+++D
Sbjct: 393 DTLKELCSILGILEQYSAKE-------------EAIPQQILELVEKRNQARKAKNFAEAD 439
Query: 370 QIRADLTRKGIALMDMGKET 389
+IR +L G ++D + T
Sbjct: 440 RIRDELKSLGYIVLDTPQGT 459
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 230/392 (58%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + H++ I D+I +I+ AY E GDV+F+V +YG+LS ++LE+
Sbjct: 102 LGVLPPDREPRATQHIQDIIDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLED 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
G RV ++S KR+P DFALWK A+ + W++PWG GRPGWHIECSAMS L + FD
Sbjct: 162 LLEGVRVELESSKRDPRDFALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFD 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS AA ++ + WMH G V +NEKMSKSLGNFFTIR++ E
Sbjct: 222 IHGGGPDLVFPHHENEIAQSEAATGETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLE 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y P +R+FL+S+HYRSP+NYS L+ A + +Y AL P+ + A
Sbjct: 282 KYQPEVIRYFLLSSHYRSPINYSDNSLEQARAGLERLY-------TALRPYSD---VAAD 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A D + F M DD NT L+ F A +Q QQ+
Sbjct: 332 EAALSD--SSALQAFQQVMDDDFNTREALSVLFDLA-------------RQLNQQEG--- 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKAL--KRAELTEEDVLQLIEERAAAR 360
E+ R I ++K + R+LGLL A + LK L L+++D+ LI ER A+
Sbjct: 374 EAARNIAVQLKTLGRVLGLLEGDAQA----YLKSGGLVSDAGSLSDDDIDALIAERIEAK 429
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+NKDF+++D IR LT GI L D T WR
Sbjct: 430 QNKDFARADDIRDQLTEAGIQLEDGPAGTQWR 461
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3.1|SYC_IDILO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 228/390 (58%), Gaps = 37/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PRV+ HM++I MI ++I N AY GDV F V +YG+LS Q LE
Sbjct: 104 LNLVRPDIEPRVTSHMDEIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQ 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD+ K++P DF LWK+AK GEPSW SPWG GRPGWHIECSAM+ +L S FD
Sbjct: 164 LQAGSRVDVDAAKQDPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A Q V YWMH+G V +NEKMSKSLGNFFTIR + E
Sbjct: 224 IHGGGSDLSFPHHENEIAQSCCANQSEYVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLE 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y +R+FL+S+HYRS LNY+ LD A A+ +Y L+D ++P
Sbjct: 284 QYDAETVRYFLLSSHYRSQLNYTQENLDQAHSALERLYTALRD----ITP---------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A+E+ +K F M DDLN ++ F+ I +N ++ P
Sbjct: 330 QTASEELRSKYWQSFQQAMDDDLNAPEAMSVLFE-----IAREINRNRESAP-------- 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ ++ + + E+ ++GLL E LQ D K + LI +R AR++
Sbjct: 377 DTAAQLAHVLLELAEVMGLLQQSP-EEFLQGDDDDVAK--------IEALIAKRNQARED 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D+ R +LT GI L D + T WR
Sbjct: 428 KDWAAADEARDELTNMGIVLEDGAEGTRWR 457
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/386 (43%), Positives = 228/386 (59%), Gaps = 21/386 (5%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T +P+ ++H++ I +I ++N AY GDVFF+VE P YG+LSG++L+ AG R+
Sbjct: 110 TVEPKATEHIDDILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKRNP DF LWKA K GEPSW+SPWG GRPGWHIEC+AMS+ YL FDIHGGG D
Sbjct: 170 EVDKRKRNPFDFVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG V N EKMSKSL NF I +I E YHP +
Sbjct: 230 LIFPHHENEIAQSEAAFGREFARFWVHNGFVQINQEKMSKSLNNFKMINEILEAYHPETV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL+S+HYRSP+++S + A + +Y L E AL+P E + +PA++
Sbjct: 290 RLFLLSSHYRSPIDFSDTSMAEAGAGLDKLYTALGRVE-ALTPSGE-----KPSPASDGD 343
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + F M DD NT+ + F+ A + IN L+ Q L +
Sbjct: 344 AGEYWNSFCQAMDDDFNTARAVAALFETA-RHINRLLD--------QAGDLLTADVSAHY 394
Query: 310 NEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ +++ +LGL P Y E +Q A K+ + ++ +++ +R AARK KDF+K
Sbjct: 395 DVMRKSGDVLGLFNTPAQVYFEGRKQ---AAAKKDAVDPAEIDRMVAQRVAARKAKDFAK 451
Query: 368 SDQIRADLTRKGIALMDM-GKETIWR 392
+DQ+R LT + L D T W+
Sbjct: 452 ADQLRKQLTDLNVVLEDSPDGTTTWK 477
>gi|357633334|ref|ZP_09131212.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|357581888|gb|EHJ47221.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 221/385 (57%), Gaps = 9/385 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR ++++ ++ DM ++I N AY GDV+F V YG+LSG+
Sbjct: 99 MDRLGILRADAEPRATEYIAEMADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ R+G RVA K +P DFALWKA+K GEP WDSP+GPGRPGWH+ECS MS L
Sbjct: 159 VEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGI 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQS AA +W+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PIDIHGGGQDLIFPHHENEIAQSEAATGSDFCRFWVHNGFVRINTEKMSKSLGNFVTIRT 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I ERY P LR FL+S+HYRSPL+YS LD A + IY E AL+ +
Sbjct: 279 IYERYLPEVLRFFLVSSHYRSPLDYSDQALDEAEKGIKRIYAAKGQMEQALT--RAKWSE 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
++ P +NKL + F M DDLNT+ + F + + +L K + +
Sbjct: 337 TKLPPEIGQELNKLEEGFTGAMDDDLNTAQAIGHVF----GLVRLAGRVLDDKTLAKSR- 391
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
E+L +I ++ ILG+ + E L +LK L R + V L+ ER A
Sbjct: 392 EAAEALGRILADLDTWSGILGVFGRDS-REFLAELKASRLARLGIDAARVDGLVAERQEA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMD 384
RK KDF++SD IR +L G+ +MD
Sbjct: 451 RKTKDFARSDAIRDELAGLGVTVMD 475
>gi|336323676|ref|YP_004603643.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
gi|336107257|gb|AEI15075.1| cysteinyl-tRNA synthetase [Flexistipes sinusarabici DSM 4947]
Length = 477
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/397 (41%), Positives = 236/397 (59%), Gaps = 29/397 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L P Y+P+ +D+++ + ++ +++I AY ++GDV+F V+ YG+LS + +
Sbjct: 100 MNKLNVKKPDYEPKATDYIDDMIELCSKLIEKGNAYEIDGDVYFRVKSFQEYGKLSNRDI 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E +AG R+ + K +P DFALWK +K GEP W+SPWG GRPGWHIECS MS+ L
Sbjct: 160 EELKAGTRIELRDNKEDPLDFALWKKSKEGEPGWESPWGKGRPGWHIECSVMSSKILGLP 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A+C YWMHNG V N EKMSKSLGNFFTIR I
Sbjct: 220 FDIHGGGKDLIFPHHENEIAQSEASCGCQFAKYWMHNGFVNINKEKMSKSLGNFFTIRDI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E + P +LR+FL++ HYRSPL++S +L A A+ IY TL D V K
Sbjct: 280 IEEFEPESLRYFLLTTHYRSPLDFSEDKLIEAESALDRIY-TLIDSMVTY-------KAG 331
Query: 241 RINPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
R D +N +++ F M DD NT+ L+ F+ K +N+L + +P +
Sbjct: 332 RKGKNLLDEVNSIKEHFEKDFIEAMDDDFNTAAALSVIFEYIRK-----MNVLLENKPDK 386
Query: 297 QQLSLIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ +SL+ N++ E++R LG+ + +D + E+++ + I +
Sbjct: 387 ESF---KSLKNQFNDILEIVRSTLGI--------AAKTPEDWFRANLSIPEKELFEKINQ 435
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R RKNK+F K+D+IR +L +KG+ L+D + T +R
Sbjct: 436 RNEYRKNKEFDKADKIRDELEKKGVELLDTPEGTKYR 472
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 233/394 (59%), Gaps = 32/394 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P+++PR ++ +E + MI +++ AYV GDVF+ V + P YG+LSG+ L
Sbjct: 101 AALGIISPSFEPRATECIESMVTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV +D+ KR+P DF LWKAAK EPSWDSPWG GRPGWHIECSAMS HYL +
Sbjct: 161 DDLRAGERVEIDTNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGER 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS +V+YWMHNG V +NEKMSKSLGNFFT+R++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEGVHGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
RY P +R F++ AHYRSPLNYS L+ A +A+ +Y L++ + + + A
Sbjct: 281 LARYQPEVVRFFIVRAHYRSPLNYSDAHLNDARNALERLYTALKNHAPSQA------QAA 334
Query: 241 RINPAAEDCINK-LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A D +N F A M+DD NT + F A + +
Sbjct: 335 EEATATIDWVNDGYAQRFMAAMNDDFNTPEAVAVLFDLASE---------ANRTGNSHYA 385
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-LTEEDVLQLIEERAA 358
SL+++L ILGLL Q L+ A + + + E++ ++I++R
Sbjct: 386 SLLKALGG----------ILGLLQ----QSPRQYLQHPAHPQNDHHSIEEIERMIQQRLQ 431
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+F+++D +R L GI L D + T WR
Sbjct: 432 ARKEKNFAQADALRQQLAEAGIILEDGPQGTTWR 465
>gi|344995511|ref|YP_004797854.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963730|gb|AEM72877.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/381 (42%), Positives = 227/381 (59%), Gaps = 30/381 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DF LWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPNEKKEDPLDFVLWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSESDDKLKAA 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I L+ +F M DDLNT+ TG + ++ IN+ N K E+L +
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANSCSK-----------EALTFAK 392
Query: 310 NEVKEVLRILGLLPP-GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ +KE+ ILG+L GA E + Q ++L+L+E+R ARK K+F+++
Sbjct: 393 DTLKELCGILGILEQYGAKEEAIPQ--------------EILELVEKRNQARKVKNFAEA 438
Query: 369 DQIRADLTRKGIALMDMGKET 389
D+IR +L G ++D + T
Sbjct: 439 DRIRDELKSLGYIVLDTPQGT 459
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 224/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L PP ++PR ++ +E + +I ++I AYV + GDV+F+V P YG+LSG+R+E
Sbjct: 103 LGVEPPDHEPRATERLESMIALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R+G R+ D K +P DF LWKAAK+GEP+W SPWG GRPGWHIECSAMS L S FD
Sbjct: 163 LRSGSRIEPDEAKHDPVDFVLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A V+YWMHNGHV ++EKM+KSLGNFFT+R +
Sbjct: 223 IHGGGVDLQFPHHENEIAQSECASGHRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R FL+S+HYRSPLNY+ LD A + +Y L+
Sbjct: 283 EHPAEVVRLFLLSSHYRSPLNYTGDALDEARGGLERLYNALRGL---------------- 326
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PAA ++ R+ F M DD NT L F A +N L++ S
Sbjct: 327 -PAAAPARSQARERFREAMDDDFNTREALAVLFDGA-----REINRLREAGDASGAASAA 380
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKR--AELTEEDVLQLIEERAAAR 360
LR++ GA +LQQ + L+ A+ E++ L+ +R AAR
Sbjct: 381 AELREL----------------GAVLGLLQQDPEAYLRGDVADAEAEEIESLVAQRTAAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K KDF+++D+IR +L +GI L D + T WR
Sbjct: 425 KAKDFAEADRIRDELQARGIELEDTPEGTKWR 456
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 224/393 (56%), Gaps = 21/393 (5%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L PT++PR ++++ Q+ +I Q+ N AY +GDV F+V K P YGRLSG+ L
Sbjct: 101 AALGVQKPTHEPRATEYVPQMLGLIGQLEANGLAYKAADGDVNFSVRKFPGYGRLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VDS K++P DF LWK AKAGEP+W+SPWG GRPGWHIECSAMS+ L
Sbjct: 161 DDLRAGERVEVDSAKQDPLDFVLWKHAKAGEPAWESPWGAGRPGWHIECSAMSSDLLGKH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR +
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEGAHGCTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y +R F++ AHYRSPLNYS LD A A+ +Y L K A
Sbjct: 281 LKKYDAEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTAL--------------KAA 326
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A D F A M DD NT L F + + N K Q +
Sbjct: 327 PAEAVAVDWNEAHAQRFQAAMDDDFNTPEALAVLFD-----LANEANRSKDSAVAAQLKA 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQ-QLKDKALKRAELTEEDVLQLIEERAAA 359
L L + ++ L+ + G + L + L ++E D+ I+ R A
Sbjct: 382 LAGVLGLLARSPEDYLKGRVVYGSGNATMSLSGNGEGTLLVGGGISESDIEARIQARIDA 441
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K K+F+++D++RA+L GI L D + T WR
Sbjct: 442 KKAKNFAEADRLRAELLAAGIVLEDSAQGTTWR 474
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2.1|SYC_CALS8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 228/380 (60%), Gaps = 28/380 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I ++I+ AYVV+GDV+F K YG+LS + +E+ AG RV
Sbjct: 108 TKSPRATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+K +P DFALWKA K GEP+W+SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPSEKKEDPLDFALWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLI---QNAASSSENDDKLKAA 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I +L+ +F M DDLNT+ TG + ++ IN+ N K E+L +
Sbjct: 345 IEELKAKFIDAMEDDLNTAEA-TGYLFEMVREINTHANSCSK-----------ETLTFAK 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ +KE+ ILG+L + E E +++L+L+E+R ARK K+F ++D
Sbjct: 393 DILKELCSILGILEQYSAKE-------------EAIPQEILELVEKRNQARKAKNFLEAD 439
Query: 370 QIRADLTRKGIALMDMGKET 389
+IR +L G ++D + T
Sbjct: 440 RIRDELKSLGYIVLDTPQGT 459
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 231/389 (59%), Gaps = 34/389 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +P+ ++ M++I +MI +++ AY + GDVF+ + +YG+L+ ++LE
Sbjct: 103 LGNLPPDREPKATEFMQEIINMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV V K +PADF LWK K GE WDSPWG GRPGWHIECSAMS + L FD
Sbjct: 163 MLAGARVEVTESKEHPADFVLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA V+YWMH G V NNEKMSKSLGNFFTIR++ +
Sbjct: 223 IHGGGPDLKFPHHENEIAQSEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+P LR+ ++S+HYRSP++YS L+ A A+ +Y L+D ++
Sbjct: 283 LYNPEVLRYLMVSSHYRSPIDYSDQSLNDAKVALERLYNALRD------------QSCSE 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P + D R F A ++DD NT L+ F D ++ +N + K + L
Sbjct: 331 IPESSD----YRTRFTAALNDDFNTPVALSVLF-DLVRDLN---------KAKTESAELA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E+L E+ + +LGLL Y + LK+ ++ +D+ +LIEER ARK+
Sbjct: 377 ETLAA---ELTNLASVLGLL----YQDADYFLKNGTFDAEGISADDIEKLIEERKQARKD 429
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
K+FS+SD+IR L KGI L+D + T W
Sbjct: 430 KNFSRSDEIRDLLAEKGIELLDSREGTSW 458
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 225/392 (57%), Gaps = 19/392 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L P + P+ +D+++Q+ M +I AY GD+++ V+K YG+LS ++L
Sbjct: 100 MDSLNILRPDHTPKATDYIKQMIQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG R+ V +K NP DF LWKA+K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 160 EDMMAGARIEVSVKKENPYDFVLWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLP 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AAC YW+HNG V N EKMSKSLGNFFTIR +
Sbjct: 220 FDIHGGGKDLVFPHHENEIAQSEAACGCMFSKYWIHNGFVNVNQEKMSKSLGNFFTIRDV 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + +R+FL++ HYRS L++S L A ++ IY L + +S F K
Sbjct: 280 LKEFDAEIVRYFLMTTHYRSALDFSQDHLLEAEKSLNRIYTMLDE----ISRFNAGKKGV 335
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I AE D+F M DD NT L F+ I + +L K K +
Sbjct: 336 DITKEAEKMKETFMDKFQTAMDDDFNTPEALAAMFE----VIRETNRLLGSKPNKISFPA 391
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L E+++ + + +VL I+ P + L ++EE++ Q I++RA A+
Sbjct: 392 LQEAVQDVFKVILDVLGIVKYTPEKWFRINLS-----------ISEEELRQKIQDRADAK 440
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+K+F +D IR +L ++GI L+D TI+R
Sbjct: 441 KDKNFELADSIRQELKQQGIELLDTIDGTIYR 472
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 218/394 (55%), Gaps = 46/394 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR ++ + +I ++ ++I+N AYV + GDV FA++ YGRLSGQ LE
Sbjct: 116 LNIMRPDEEPRATETIPEIIALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEE 175
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG R+ ++ KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ YL FD
Sbjct: 176 LEAGARIEIEKTKRNPFDFVLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFD 235
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DLIFPHHENEIAQSC AC V+YWMH+G V N+EKMSKSL NFFTIR + E
Sbjct: 236 IHGGGSDLIFPHHENEIAQSCCACHSKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLE 295
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R FL+SA YRSPLNY+ LD A ++ +Y L+D + P + G
Sbjct: 296 HYDAETIRFFLLSAQYRSPLNYTQENLDKAKASLARLYTALRD----VVPVKAEG----- 346
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
ED K F M DD NT + F L K K++
Sbjct: 347 ----EDEYTK---RFKELMDDDFNTPGAMAVLFD------------LAKAVNKEEG---- 383
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAA 358
E+ K+ + E+ +LG +L Q LK AE ++ D + LI+ER
Sbjct: 384 ETKAKLAGRLVELGSVLG---------ILYQNPSSFLKGAESSDNDEVSVIEALIQERKD 434
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KDF +D R LT GI L D T WR
Sbjct: 435 ARARKDFKAADAARDKLTAMGIVLEDGPSGTTWR 468
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 235/398 (59%), Gaps = 35/398 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L T +PR ++H+ +I ++ ++ AY V+GDV+F V++ YGRLS + +
Sbjct: 100 MEKLGVRRATLEPRATEHIAEIVRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNV 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ +AG RV VD RKR+P DFALWK +K GEPSWDSPWG GRPGWHIECSAM+ +L
Sbjct: 160 DDLQAGARVDVDERKRHPMDFALWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGET 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DLIFPHHENEIAQSC A YW+HNG V N EKMSKSLGNFFTIR+I
Sbjct: 220 FDIHGGGMDLIFPHHENEIAQSCGATGKEFARYWVHNGFVQINQEKMSKSLGNFFTIREI 279
Query: 181 TERYH------PLALRHFLISAHYRSPLNYSVLQLDSASDAV--FY-IYQTLQDCEVALS 231
++ LR+FL++ HYRSPL++S L A +A+ FY +++ L + S
Sbjct: 280 FQKSEWPDTVTGEMLRYFLLTTHYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHS 339
Query: 232 PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
P + + ++ + + R+ F A M DDLNT + L ++L ML+
Sbjct: 340 PGDQ---------SMQEAMVRTREAFVAAMDDDLNTPNAL------------AALQMLRG 378
Query: 292 KQPKQQQLSLIESLRK-IENEVKEVLRILGLLPPGAYSEVLQQLKDKA----LKRAELTE 346
K + L +R+ + E + + +LGLL + +QQ + + L++
Sbjct: 379 DTNKALEAGLSGEMRQMVRQEFRALGIVLGLLQTDTWRFKIQQQQPSSGGAEASTGTLSD 438
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 384
ED+ + R AA+++K++ +DQ+RA+L GI + D
Sbjct: 439 EDIADKLAARLAAKRSKNYQLADQLRAELASHGITIED 476
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 225/375 (60%), Gaps = 28/375 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIPDMIVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DLSEKKEDPLDFALWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + Q ++ N +
Sbjct: 288 RLFMLQAHYRKPLNFSLDLIEQAEVALKRIYTCYENLEFLI---QNETSSSENNDKLKTV 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I +L+ +F M DDLNT+ TG + ++ IN+ N K E+L +
Sbjct: 345 IEQLKAKFIEAMEDDLNTAEA-TGYLFEMVREINTHANFCSK-----------ETLTFAK 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ +KE+ ILG +L+Q K E +++L ++E+R ARK K+F+++D
Sbjct: 393 DVLKELCSILG---------ILEQYSSK----EEYVPQEILDMVEKRNQARKLKNFAEAD 439
Query: 370 QIRADLTRKGIALMD 384
+IR +L G ++D
Sbjct: 440 RIRDELKSLGYIVLD 454
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 232/394 (58%), Gaps = 24/394 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L P +P+ ++H+ +I +++ ++ + AY V GDV++ VEK +YG+LSG+ +
Sbjct: 100 MYRLNIAKPEVEPKATEHINEIIELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNI 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ ++G RV ++ +K NP DFALWK +K EP W SPWG GRPGWHIECSAMS YL
Sbjct: 160 DELKSGARVEINDKKENPLDFALWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGES 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA YW+HNG V N EKMSKSLGNFFTI+ I
Sbjct: 220 FDIHGGGEDLIFPHHENEIAQSEAATGKPFARYWIHNGFVRINKEKMSKSLGNFFTIKDI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y LR+FL+ HYRSP+++S LD+A +A+ Y +Q E + F+++GK
Sbjct: 280 LKKYDGQTLRYFLLLTHYRSPIDFSFEGLDAAKEALNRYYNFIQRLED--TEFEKNGK-- 335
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQ 298
++ E + L F M +D N + F +K N L+ + + K K +
Sbjct: 336 -VDELLEKRLKDLLARFEEAMDEDFNAPKAIGEVFS-VIKTFNQYLDSITEGDKPKKAYK 393
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +ES+ KI++ +LG+ + S + + D + EE + Q RA
Sbjct: 394 ETFLESMNKIKS-------VLGVFDTSSASWFIPEGID-----VDWVEERIKQ----RAL 437
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKNKD+ +D+IR +L KGI L D + T W+
Sbjct: 438 ARKNKDYETADKIRDELNGKGIILEDAKEYTRWK 471
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 239/400 (59%), Gaps = 36/400 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L L PT +PR ++ +++I ++ ++++ AYVV+GDV+F V +YG+LSG++L
Sbjct: 101 MDALAVLRPTLEPRATEFIKEIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV VDSRK++P DFALWKA K GEP+W+SPWG GRPGWHIECSAMS L
Sbjct: 161 EDMEAGARVKVDSRKKDPFDFALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENE+AQS AA V YWMHNG V ++EKMSKSL NF T+++I
Sbjct: 221 FDIHGGGQDLIFPHHENEVAQSEAAFGQQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEH 236
+++HP A+R FL+S HYRSP++++ + A+ + +Y LQ ++ FQ
Sbjct: 281 LDQFHPEAVRLFLLSKHYRSPVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQIS 340
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
G +R F A M DD NT+ L G +A++ +N L+
Sbjct: 341 GHWSR---------------FCACMDDDFNTAGAL-GILFEAVRDVNRLLD--------- 375
Query: 297 QQLSLIESLRKIE--NEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
L+ + +R E + ++ +LG+ P AY + K++A + V L
Sbjct: 376 GDLTGDDQVRATEAGAAIVKMGGVLGMFQEDPVAY---FEGKKEQAAQDGGFDPAMVDDL 432
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I +R+ ARK+KD++ +D IR LT G+A+ D TIW+
Sbjct: 433 IAKRSQARKDKDWNTADAIRDQLTEMGVAIEDTPDGTIWK 472
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 238/395 (60%), Gaps = 31/395 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L C P P+ ++++ ++++MI+ +++ AY GDV+F V K YGRLSG++L
Sbjct: 103 AKLGCAEPDEAPKATEYIGEMQNMISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV ++ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 EDMQAGASERVDIEVEKKHPFDFVLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLTFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + E Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYE------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ +D + + F+ M DD NT + F+ +N LN K+Q +Q
Sbjct: 337 N---DSTQKD--EQFIERFNIAMRDDFNTPEAIAVLFE-----LNRELNRAVKEQQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLK-DKALKRAELTEEDVLQLIEERA 357
+LR + +ILGL+ +V + LK D + L+++++ +I++RA
Sbjct: 387 AIYYVTLRHL-------TQILGLVQ----HDVDEFLKSDIGQEVLSLSDDEIQAMIQQRA 435
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDFS +D IR L +G+ L D + T+WR
Sbjct: 436 DAKKAKDFSGADAIRQALLDQGVVLEDTRQGTLWR 470
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/390 (43%), Positives = 228/390 (58%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPPT +PR + HM+ I DMI +I+ AYV + GDV++AV + P+YG+LSG+ ++
Sbjct: 103 LGILPPTDEPRATAHMDDILDMIQTLIDKGFAYVADNGDVYYAVSRFPDYGKLSGKNPQD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R+G RV + KR+P DFALWKAAK EP+WDSPWG GRPGWHIECSAMS L + FD
Sbjct: 163 LRSGARVEIGEAKRDPLDFALWKAAKPDEPAWDSPWGAGRPGWHIECSAMSTCALGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A + V+ WMHNG V N EKMSKSLGNFFT+R+I +
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY P +R+F++++ YRSPLNY L +A A+ Y L+ +
Sbjct: 283 RYRPEEIRYFILTSQYRSPLNYDDEHLQNARSALTRFYTALRGL-------------PSV 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P + R+ FHA M DD NT L F + +N ++ +
Sbjct: 330 EPVGGET---FRERFHAAMDDDFNTPEALAVLFD-----LAREINRVRADD--------L 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E + E++ + +LG+L + + L+ A L D+ LI +R AAR
Sbjct: 374 ERAAALGAELRRMGEVLGILQ----DDAERYLRGDATA-GGLANADIDDLIAQRIAARAA 428
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++++D+IRA LT GI L D + TIWR
Sbjct: 429 KNWAEADRIRAVLTEAGIVLEDNPQGTIWR 458
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 221/391 (56%), Gaps = 40/391 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++PR ++H+ + +I +I N AY GDV++AV + P YG+LSG+ LE+
Sbjct: 103 LGVIHPDFEPRATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FD
Sbjct: 163 LRAGERVEVDVNKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A V+YW+HNG + +NEKMSKSLGNFFTIR++ E
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTAR 241
+Y +R F++ AHYRSPLNYS + LD A ++ +Y L++ ++ E AR
Sbjct: 283 KYDAEVVRFFILRAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYAR 342
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
F M DD NT + F A + + Q L
Sbjct: 343 --------------RFRQAMDDDFNTVEAMAVLFDLAGEV---------NRGESAAQAGL 379
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+++L +LGLL Q+ AEL+ + + LI+ R AR
Sbjct: 380 LKALGA----------VLGLL-----QRAPQEFLQGGSTAAELSADAIEALIQARRDART 424
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR +L KG+ L D + T WR
Sbjct: 425 AKNWAESDRIRDELAAKGVILEDGAQGTTWR 455
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 222/391 (56%), Gaps = 40/391 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++PR ++H+ + +I +I N AY GDV++AV + P YG+LSG+ LE+
Sbjct: 103 LGVIHPDFEPRATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAK GEPSW SPWG GRPGWHIECS MS H+L FD
Sbjct: 163 LRAGERVEVDVNKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A V+YW+HNG + +NEKMSKSLGNFFTIR++ E
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGAHNHDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSPFQEHGKTAR 241
+Y +R F++ AHYRSPLNYS + LD A ++ +Y L++ ++ E AR
Sbjct: 283 KYDAEVVRFFILRAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYAR 342
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
F M DD NT + F + +N + Q L
Sbjct: 343 --------------RFRQAMDDDFNTVEAMAVLFD-----LAGEVN----RGESAAQAGL 379
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+++L +LGLL Q+ AEL+ + + LI+ R AR
Sbjct: 380 LKALGA----------VLGLL-----QRAPQEFLQGGSTAAELSADAIEALIQARRDARA 424
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR +L KG+ L D + T WR
Sbjct: 425 AKNWAESDRIRDELAAKGVILEDGAQGTTWR 455
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/389 (44%), Positives = 226/389 (58%), Gaps = 36/389 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L +PP ++PRV++H+ QI D+I +IN D AYV + GDV++ V K YG+L+ Q L +
Sbjct: 103 LDVIPPDFEPRVTEHIPQIVDLIQTLINKDFAYVTKTGDVYYEVAKFKAYGKLAHQDLNS 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G RV KR+P DF LWKAAK EP W SPWG GRPGWHIECSAM+ YL FD
Sbjct: 163 LRTGIRVETSEDKRDPLDFVLWKAAKPNEPFWPSPWGNGRPGWHIECSAMAKKYLGENFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHH+NE+AQS AA V+YWMH G V N EKMSKSLGNFF +++ +
Sbjct: 223 IHGGGNDLQFPHHQNELAQSEAANGCCFVNYWMHMGFVQVNQEKMSKSLGNFFVLKEALK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP LR+F++++HY+SP+N+S L++A A+ Y TL+D +A
Sbjct: 283 KYHPEILRYFVVASHYQSPINFSENNLENAHAALQRFYITLRDLPIA------------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
N D N+ FHA M DD NT L F D + IN N QLSL
Sbjct: 330 NTKDFDPKNQFNKRFHAAMDDDFNTPEALAVLF-DLAREINRLRN--------ADQLSLA 380
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ +K + ILG +LQ +K LK A + E + LI R AARK+
Sbjct: 381 AQHGAL---LKHLGWILG---------ILQDDPEKFLK-AGIDENKIQSLINARNAARKD 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
K+++++D+IR +LT I L D T W
Sbjct: 428 KNWAEADRIRGELTAMRITLEDTPNGTTW 456
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 240/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
ADL C+ P P+ +++++Q+++MI+ ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ADLGCVAPDEAPKATEYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + +Q+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFK-------AYQQVYG 335
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ + + + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 336 QKTVDALEQSFVER----FNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ L +LR++ N ILGL+ + + AL L++ D+ LI++R
Sbjct: 387 MVLYSTLRQLTN-------ILGLVQHNVDEFLKSDIGQDALA---LSDTDIEDLIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTIWR 470
>gi|342216509|ref|ZP_08709156.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587399|gb|EGS30799.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 461
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 229/385 (59%), Gaps = 36/385 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR +++M++I I +++ AY ++GDV+F + K+ +YG+LSG+ L+ ++G R+
Sbjct: 109 TINPRATEYMDEIIHFIKDLVDKGAAYELDGDVYFDITKAKDYGKLSGKNLDELQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +K+NP DFALWK K GEP+W+SPW GRPGWHIECS M+ L DIH GG D
Sbjct: 169 DVNEKKKNPGDFALWKKKKEGEPAWESPWSQGRPGWHIECSVMAKTLLGKTIDIHTGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A +W+HNG +T ++EKMSKS GNFFT+R I++ Y L
Sbjct: 229 LEFPHHENEIAQSEAHNGQDFARFWLHNGMITVDHEKMSKSKGNFFTVRDISKEYDLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR--INPAAE 247
R FLIS+HYRSP+N+S +D A+ +Y T E AL K A+ +P +
Sbjct: 289 RLFLISSHYRSPINFSKEVMDQNKHALERLYNTKDRLEGAL-------KAAKPGSDPNFD 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
I +L++EF M DD+NT+ L+ F D K IN +N +++ L ESL+
Sbjct: 342 QDIQRLKEEFCQAMEDDMNTADALSKLF-DLSKRINQGIN---------EEIGL-ESLKG 390
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ + ++LGLL K + EE+VL+LI+ER ARKNKDF++
Sbjct: 391 AQESYLSLAKVLGLL----------------YKEEDQAEEEVLKLIKEREEARKNKDFAR 434
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D +R L GIA+ D T W+
Sbjct: 435 ADALRDQLLEMGIAIEDSRDGTKWK 459
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 225/392 (57%), Gaps = 20/392 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++HM+ I I ++ AY V+F V K +YG+LS +L
Sbjct: 101 MKALKVKPADIYPRVTEHMQDIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ G RV KRNP DFALWK AK GEP W+SPWG GRPGWHIECS MS+ YL
Sbjct: 161 EDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YWMH G + N EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY+P +R F++ HYRSPL+YS ++ A + + +Y TL++ VA+S + +
Sbjct: 281 LKRYNPEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWD 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A + I R +F+ M DD NT+ L F+ + IN L ++K PK+
Sbjct: 341 EPEFRAYEAIRDARKKFYEAMDDDFNTAEALKAVFEVS-NAINRYLTEVEK--PKES--- 394
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LRK K+V + GL + + ++ ++AE EE + L+E RA R
Sbjct: 395 ---ILRKAWEFFKDVGEVFGL-----FEDYFKE------QKAENDEELINLLVEVRAQLR 440
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K F +D+IR +L + GI L D + T+W+
Sbjct: 441 KEKKFDLADKIREELRKLGIQLEDTPQGTVWK 472
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 232/398 (58%), Gaps = 35/398 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L C+PP +PR +D++++++D+I ++ AY +GDV++AV+ YG+LS + L+
Sbjct: 113 LGCIPPNQEPRATDYIDEMQDIIETLVAGSYAYAGNKGDVYYAVDSFAGYGKLSKRNLDE 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V++ KRNP DF LWKAAK GEP W SPWG GRPGWHIECSAMS L + FD
Sbjct: 173 MQAGSRVEVENDKRNPFDFVLWKAAKPGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A+ WMH G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGHDLQFPHHENEIAQSEASTGCKYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YH +R+FL+S+HYRS +N+S + LD A +++ +Y TL+ E Q+ G+T I
Sbjct: 293 KYHSETVRYFLLSSHYRSQVNFSDVALDEAHNSLSRLYNTLKIAE------QQKGQTLEI 346
Query: 243 NPAAEDCINKLRDE-----FHARMSDDLNTS---HILTGAFQDALKFINSSLNMLKKKQP 294
N E IN F M+DD NTS +L G +D K I S + K Q
Sbjct: 347 N---EHLINDAYSSDAGYFFIQAMNDDFNTSAATSVLFGLARDINKAIKSE-EVDKAWQW 402
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
QQ +L + L ++ V + L+ + Q D LT+ + LI
Sbjct: 403 AQQLKALAQVLNILQQPVSQFLQAV----------AGDQADDG------LTDAVIDGLII 446
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ERA A+ NKDF+++D++R L GI L D T WR
Sbjct: 447 ERAEAKANKDFTRADEVREQLKAAGIELEDSRAGTTWR 484
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 227/395 (57%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ D AYV E GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKDSAYVSENGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQINGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 339 ------------WQEQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPA 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 375 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIRADL KGI L D T WR
Sbjct: 418 KARAERNWAKADQIRADLLSKGIELEDGATGTTWR 452
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 217/399 (54%), Gaps = 53/399 (13%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P+ ++H+ Q+ MI Q+I N AY GDV++AV + P YG+LSG+ L++ RAGE
Sbjct: 110 PDVEPKATEHIAQMIAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VD KR+P DF LWKAAK EP W SPWG GRPGWHIECSAM FDIHGGG
Sbjct: 170 RVEVDGFKRDPLDFVLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGG 229
Query: 128 IDLIFPHHENEIAQSCAACQ---------------DSNVSYWMHNGHVTNNNEKMSKSLG 172
DL FPHHENEIAQSC A DS+V YW+HNG + +NEKMSKSLG
Sbjct: 230 ADLQFPHHENEIAQSCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLG 289
Query: 173 NFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP 232
NFFTIR + ++Y +R F++ AHYRSPLNYS LD A ++ +Y L + A
Sbjct: 290 NFFTIRDVLKKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPAPFT 349
Query: 233 FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
EH N F+A M DD +T + F+ L K+
Sbjct: 350 LSEHA-------------NDYTRRFYAAMDDDFDTVKAVAVLFE------------LAKE 384
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
K Q L L+ + +LGLL + + D L+ + + L
Sbjct: 385 VNKTQSAELSGCLKALAG-------VLGLLQREPHEFLQSGAPDNG-----LSADAIEAL 432
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
I +R AR NK++++SD+IR +L +G+ L D G ET W
Sbjct: 433 IAQRNLARANKNWAESDRIRDELAAQGVVLRDAGGETTW 471
>gi|359396712|ref|ZP_09189763.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
gi|357969390|gb|EHJ91838.1| Cysteinyl-tRNA synthetase [Halomonas boliviensis LC1]
Length = 468
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 223/396 (56%), Gaps = 42/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L LPP+++PR + H+E I MI +I AY + GDV++ V K NYG+L+ ++L
Sbjct: 104 ARLFVLPPSHEPRATGHIEDIVAMIETLIEKGFAYAADNGDVYYRVRKFANYGKLNNRQL 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ R+G RV VD K +P DF LWKAAK GE W SPWG GRPGWHIECSAMS L
Sbjct: 164 DDMRSGARVDVDVHKEDPLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDT 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR +
Sbjct: 224 FDIHGGGPDLTFPHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDV 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P +R L+++HYRSP+NYSV L A ++ +Y L+ L P +
Sbjct: 284 LAEHDPEVVRFLLVASHYRSPINYSVDSLTEARKSLTRLYTALE----GLEPGE------ 333
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A D + R+ F M DD NT L F+ + +N K+ QP +
Sbjct: 334 ----ANRDAASAYRERFTQVMDDDFNTPEALAVMFE-----LAREVNRAKQDQPVEAA-- 382
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQLIEE 355
K+ E+K++ ILGL LQQ+ LK + L+E ++ I +
Sbjct: 383 ------KMAGELKQLGSILGL---------LQQVPQTFLKGTQQQGMPLSESEIEAKIAQ 427
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R A+ NKDF+++D IR +L GI L D + T W
Sbjct: 428 RIEAKTNKDFAQADAIRDELAAMGIILKDSREGTSW 463
>gi|403675335|ref|ZP_10937514.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 10304]
Length = 473
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+TE++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVTEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|333367377|ref|ZP_08459646.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 229/393 (58%), Gaps = 12/393 (3%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L C P +PR + H++ + MI + + AY GDV++AV+ YG+LS ++L
Sbjct: 124 AALGCESPDAEPRATQHIDDMLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKL 183
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG RV VD+ K+NP DF LWKAAKAGEP WDS WG GRPGWHIECSAMS L +
Sbjct: 184 EDLQAGSRVDVDTDKKNPFDFVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNS 243
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + + EKMSKSLGNFFTIR++
Sbjct: 244 FDIHGGGHDLQFPHHENEIAQSEAATGCTYANNWMHVGFINVDGEKMSKSLGNFFTIREV 303
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E++HP +R F++S+HYRS +N+S L A + +YQ L+ E L A
Sbjct: 304 MEKFHPETIRFFILSSHYRSQVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEA 363
Query: 241 RINPAAEDC-INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
I+ A+ D I F M+DD NT ++ F + +N L ++ Q
Sbjct: 364 TIDTASIDSEIRGYSANFIKAMNDDFNTPQAISVLFS-----LAKEVNKLARETENDQAT 418
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ +++ + L I G + P +E LQ ++ ++T+E + LI+ER A
Sbjct: 419 AKLKAAAVTLKGLAGTLNI-GQVKP---TEFLQA-HIGSVDEEQMTDEQIDTLIQERIDA 473
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ NK+F+++D+IR L + I L D + T WR
Sbjct: 474 KANKNFARADEIRNLLQQNNIELEDSKQGTTWR 506
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/394 (40%), Positives = 232/394 (58%), Gaps = 37/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR + ++ +I + I +I+ D AY ++GDV+F+ +K NYG+LSGQ +++
Sbjct: 102 LHIKRATVNPRATLYITKIIEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
RAG R+ VD RK++P DFA+WK K GEP+W+SPWG GRPGWHIECS M+ L DI
Sbjct: 162 RAGARIDVDERKKDPMDFAVWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS + YWMH+ V NN+KMSKSL NFFT+R+I E+
Sbjct: 222 HAGGSDLMFPHHENEIAQSEGRTGKTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILEK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-----PFQEHGK 238
Y P +R F++S HYR+ +N+S+ LDS A+ +Y ++ + E L P E+ K
Sbjct: 282 YEPDVIRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEK 341
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R + + K + + +M DD NT+ ++ F D +K IN S+N +
Sbjct: 342 EYR------NKLGKYKQRYIEKMDDDFNTADAISVIF-DLVKDINVSIN----------K 384
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
S +E +R N ++E+ GA +LQQ K ++ E+++ LIE+R
Sbjct: 385 DSSVEVIRDSLNLIREL---------GAPLGILQQSKRGSI------EKEIEALIEKRQI 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K+++ SD+IR DL +GI L D + W+
Sbjct: 430 ARSEKNWALSDKIRDDLKAQGIVLEDTPEGVRWK 463
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 229/395 (57%), Gaps = 26/395 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H++ I + I ++ AY V+F V+K +YG+LSG ++
Sbjct: 101 MNALKVKPADIYPRVTEHIDDIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV K+NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL
Sbjct: 161 EELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+Y+ L A + + +Y TL++ +A+ + K +
Sbjct: 281 LQRYSPEVIRLFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWS 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQ 298
+ A + I + R +F+ M DD NT+ L F+ +++++N +L+ +PK+
Sbjct: 341 EKDFEAYEAIREARKKFYDAMDDDFNTAEALKAVFE-----VSNAINKYILEVDKPKESI 395
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERA 357
L + E +++ SEV +D + + EE +++ L+E R
Sbjct: 396 L----------RKALEFFKVV--------SEVFGIFEDYFKEEKKGEEEKLIELLVEVRK 437
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K F +D+IR +L + GI L D G+ET+W+
Sbjct: 438 QLRKEKRFDLADKIREELRKLGIQLEDKGQETVWK 472
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 229/376 (60%), Gaps = 30/376 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ +E + +I +I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIEDMIALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWHIECS M+ YL DIH GG D
Sbjct: 168 DPNEKKEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A+ +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEASTGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA-ED 248
R F++ AHYR PLN+S+ ++ A A+ IY ++ E + ++G T+ + + +
Sbjct: 288 RLFMLQAHYRKPLNFSIDLIEQAESALKRIYTCYENLEYLI----KNGTTSNSSDSTLKA 343
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+ +L+ +F M DDLNT+ TG + ++ IN+ N K + L
Sbjct: 344 VLKELKAKFIDAMEDDLNTAEA-TGYLFEMVREINTHSNTCSK-----------DVLILA 391
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ +KE+ ILG +L+Q ++ K+ E+ E +L+L+E+R ARK K+F ++
Sbjct: 392 RDTLKELCSILG---------ILEQYEE---KKDEIPPE-ILELVEKRNEARKAKNFLEA 438
Query: 369 DQIRADLTRKGIALMD 384
D+IR DL G ++D
Sbjct: 439 DRIRDDLRSLGYIVLD 454
>gi|421808496|ref|ZP_16244343.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
gi|410415644|gb|EKP67429.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC035]
Length = 473
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + N EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEKYVNYWMHVGFINVNGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSNIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|342215232|ref|ZP_08707886.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
gi|341588729|gb|EGS32105.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 780 str. F0422]
Length = 482
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/389 (45%), Positives = 228/389 (58%), Gaps = 33/389 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS HME+I MIT +I+N AY V+GDV++ VEK +YG+LSG+ L++ AG RV VD
Sbjct: 114 PRVSTHMEEIISMITTLIDNGYAYAVDGDVYYRVEKFEHYGKLSGRTLDDMEAGARVDVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIF
Sbjct: 174 DRKENPMDFALWKAAKPGEPFWESPWGQGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C + + V YW+HNG +T N EKMSKSL NFF ++ I E+Y ALR
Sbjct: 234 PHHENEIAQS-EGCSEHHPAVRYWVHNGFITINQEKMSKSLNNFFLVKDILEQYSADALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
FL+S HYRSPL++S +LD A+ A+ +QT+ D + L E A + +
Sbjct: 293 FFLLSTHYRSPLDFSDERLDEATKAI-ERFQTVIDNLLYLESRPE----GLCELEAAELL 347
Query: 251 NKLR---DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
R +EF A MSDD NT+ + T K IN ++ S I +++
Sbjct: 348 KNARNYEEEFEAAMSDDFNTA-LATAPIYGLAKEINIYYQSVQSCDGTVCH-STIGEVKE 405
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE----RAAARKNK 363
I K +L ILGLL G K E + E+ QL+E R AR+ K
Sbjct: 406 I---FKMMLDILGLLEEG-------------WKGQETSNEEYNQLMEVILNIRQCAREQK 449
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D IR +L GI + D + W+
Sbjct: 450 QWGIADSIRDELANIGIIIEDSPQGARWK 478
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE
Sbjct: 105 LNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQ 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 165 LQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 225 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS +NYS L A A+ +Y ++D ++ ++P
Sbjct: 285 HYDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAP---------- 334
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F + +N LK Q +
Sbjct: 335 -APAEEFVAK----FKAAMDDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+K++ +LGL L Q D A + E ++++V + LI ER A
Sbjct: 385 --------AMKQLADVLGL---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D T WR
Sbjct: 427 RAEKDWPAADVARNRLNELGVVLEDGPSGTTWR 459
>gi|336449929|ref|ZP_08620386.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
gi|336283086|gb|EGN76293.1| cysteinyl-tRNA synthetase [Idiomarina sp. A28L]
Length = 460
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 221/396 (55%), Gaps = 47/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PRV+ HM++I D++ Q++ AYV GDV F V P YGRLSGQ LE
Sbjct: 103 LNLVEPDIEPRVTTHMQEIIDLVAQLVEKKHAYVASSGDVLFDVSSFPEYGRLSGQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RVAV K++ DF LWK AKA EPSW+SPWG GRPGWHIECSAM+ +L FD
Sbjct: 163 LQAGARVAVTEGKQDQMDFVLWKRAKADEPSWESPWGAGRPGWHIECSAMNGKHLGKHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YWMH G V N EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHDTPYVNYWMHTGMVQVNQEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R FL+S HYRS LNYS LD A ++ IY ++ I
Sbjct: 283 SYAAETVRFFLLSGHYRSQLNYSEAHLDQAHASLERIYTAMRG----------------I 326
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
N AE +R+ + AR ++DD N ++ F+ I +N + + +
Sbjct: 327 N--AETASASVRESYEARIREALNDDFNVPEAMSVIFE-----ITREVN-----RQRSEN 374
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEER 356
SL L + L GA +LQQ D+ LK +E E + LIE+R
Sbjct: 375 KSLAAEL------------VFLLQEYGAILGILQQQPDEFLKGSEDDSEVAKIEALIEQR 422
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+AR+ KD++ +D R +L GI L D + T+WR
Sbjct: 423 NSAREAKDWAGADAARDELQALGIVLEDTAEGTLWR 458
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ ++++EQ+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIEQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 217/395 (54%), Gaps = 18/395 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV+DH++ I + I ++ AY ++F V+K P YG+LSG ++
Sbjct: 100 MEALKVKPADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKI 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G RV K+NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL
Sbjct: 160 EDLQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGES 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF TIR++
Sbjct: 220 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIREL 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL Y+ L A + + +Y TL++ VAL +
Sbjct: 280 LKRYEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWG 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + I + + +F+ M DD NT+ L F+ A IN L K PK+ L
Sbjct: 340 ELEFKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILR 396
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
KI +EV G + + ++ + + +L E L+E R R
Sbjct: 397 KALEFFKIVSEV-----------FGVFEDYFREETKEREESEKLIE----LLVEVRKQLR 441
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
K K + +D IR +L + GI L D G ET W+ +
Sbjct: 442 KEKRYELADMIREELKKLGIQLEDRGSETTWKRII 476
>gi|448747541|ref|ZP_21729198.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
gi|445564821|gb|ELY20936.1| Cysteinyl-tRNA synthetase, class Ia [Halomonas titanicae BH1]
Length = 468
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 223/393 (56%), Gaps = 36/393 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L LPP+++PR + H++ I MI +I AY + GDV++ V K +YG+L+ ++L
Sbjct: 104 ARLFVLPPSHEPRATGHIDDIVAMIETLIEKGFAYAADNGDVYYRVRKFADYGKLNNRQL 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG RV VD K +P DF LWKAAK GE W SPWG GRPGWHIECSAMS L
Sbjct: 164 DDMRAGSRVDVDVHKEDPLDFVLWKAAKPGEAHWASPWGNGRPGWHIECSAMSTCCLGDT 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR +
Sbjct: 224 FDIHGGGPDLTFPHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDV 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P +R L+++HYRSP+NYSV L A ++ +Y L+ E
Sbjct: 284 LAEHDPEVVRFLLVASHYRSPINYSVDSLTEARKSLTRLYTALEGLE------------- 330
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ A D + R+ F M DD NT L F+ + +N K++QP +
Sbjct: 331 -LGAANSDDASAYRERFTQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPNEAA-- 382
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
K+ E+K++ +LGLL P + + QQ + L+E ++ I +R
Sbjct: 383 ------KLAGELKQLGSVLGLLQQEPQTFLKGTQQ------QGMPLSESEIEAKIAQRIE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A+ NKDF+++D IR +L GI L D + T W
Sbjct: 431 AKANKDFAQADAIRDELAALGIILKDSREGTSW 463
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 217/395 (54%), Gaps = 18/395 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV+DH++ I + I ++ AY ++F V+K P YG+LSG ++
Sbjct: 106 MEALKVKPADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKI 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G RV K+NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL
Sbjct: 166 EDLQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGES 225
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF TIR++
Sbjct: 226 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVKYWLHTGFVMVKGEKMSKSLGNFVTIREL 285
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL Y+ L A + + +Y TL++ VAL +
Sbjct: 286 LKRYEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWG 345
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + I + + +F+ M DD NT+ L F+ A IN L K PK+ L
Sbjct: 346 ELEFKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVA-NAINKYLTEANK--PKESILR 402
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
KI +EV G + + ++ + + +L E L+E R R
Sbjct: 403 KALEFFKIVSEV-----------FGVFEDYFREETKEREESEKLIE----LLVEVRKQLR 447
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCV 395
K K + +D IR +L + GI L D G ET W+ +
Sbjct: 448 KEKRYELADMIREELKKLGIQLEDRGSETTWKRII 482
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 233/391 (59%), Gaps = 14/391 (3%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L PTY+PR S+H+ +I +I ++I AY GDV+F V K P+YG+LSG+++E
Sbjct: 108 LGLLKPTYEPRASEHIPEIISLIEKLIEKGLAYQSNGDVYFEVTKFPSYGKLSGRKIEEL 167
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG R+ V +K+NP DFALWK+AK GEP W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 168 IAGVRIEVSEKKKNPLDFALWKSAKPGEPFWESPWGKGRPGWHIECSAMALKYLGETIDI 227
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DLIFPHHENEIAQS A + Y++H+G +T EKMSKSLGN+ T+ + +
Sbjct: 228 HGGGLDLIFPHHENEIAQSEGATEKQFARYFIHHGLITVKGEKMSKSLGNYVTMEYLLKT 287
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+HP ++ FL+S HYRSPL+Y + + A++ Y+TL + A P +E G +
Sbjct: 288 FHPEVIKAFLLSTHYRSPLDYREENIKNMEKAIYRFYETLYWLKKA-QPLKE-GLLSEKA 345
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
E + + F + + DD NT+ L F F N N + K + L+
Sbjct: 346 RKLEKGLKDFENNFISALLDDFNTALALGHLFS----FENEIYNFITKTPNLTTEEVLL- 400
Query: 304 SLRKIENEVKEVL-RILGL--LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L KIE +++++ +ILG+ P + ++ K K +K+ ED L+++R +AR
Sbjct: 401 -LEKIEKKIRDLSGKILGIGEREPDEFWNTERKRKLKIIKKDLKEIED---LVKKRESAR 456
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
K K+F +D+IR +L GI L D ET W
Sbjct: 457 KEKNFILADKIRDELKNLGIILKDTRTETFW 487
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 224/394 (56%), Gaps = 24/394 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H+ I D I ++ AY + V+F V+K YG+LSG ++
Sbjct: 101 MNALKVKPADIYPRVTEHIGDIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV K+NP DFALWK AK GEP WDSPWG GRPGWHIECS MS+ YL
Sbjct: 161 EELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+YS L A + + +Y TL++ +A+ +
Sbjct: 281 LQRYSPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWD 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQ 298
+ + I R +F+ M DD NT+ L F+ +++++N + +K++PK+
Sbjct: 341 EDDYEVYEAIKNARKKFYEAMDDDFNTAEALKAVFE-----VSNAINKYLTEKERPKEA- 394
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
LRK K V I G+ Y + ++ ++ L + L++ R+
Sbjct: 395 -----ILRKALEFFKVVSEIFGIFED--YFKEEKREIEEELIKV---------LVDVRSQ 438
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K F +D+IR +L R GI L D G+ET+W+
Sbjct: 439 LRKEKRFDLADKIREELRRLGIQLEDRGQETVWK 472
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE
Sbjct: 105 LNMIRPDFEPRATLHITEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQ 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 165 LQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 225 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS +NYS L A A+ +Y ++D ++ ++P
Sbjct: 285 HYDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAP---------- 334
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F + +N LK Q +
Sbjct: 335 -APAEEFVAK----FKAAMDDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+K++ +LGL L Q D A + E ++++V + LI ER A
Sbjct: 385 --------AMKQLADVLGL---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D T WR
Sbjct: 427 RVEKDWPAADVARNRLNELGVVLEDGPSGTTWR 459
>gi|407007122|gb|EKE22871.1| hypothetical protein ACD_6C00698G0001, partial [uncultured
bacterium]
Length = 354
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 221/377 (58%), Gaps = 29/377 (7%)
Query: 19 MEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAG--ERVAVDSRK 75
++Q++DMI ++N AY GDV+F VEK YGRLSG++LE+ +AG ERV V+ K
Sbjct: 1 IDQMQDMIGNLVNKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEVEK 60
Query: 76 RNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHH 135
++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L + FDIHGGG DL FPHH
Sbjct: 61 KHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFPHH 120
Query: 136 ENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLIS 195
ENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTI + E++HP +R+F++S
Sbjct: 121 ENEIAQSEASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIHDVIEKFHPEVVRYFIVS 180
Query: 196 AHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRD 255
+HYRSP+NYS + L A + + Y + + + + E +
Sbjct: 181 SHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYG-----------DHLIETLDEAFVE 229
Query: 256 EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENEVKEV 315
F+ M DD NT + F+ IN LN K++ +Q +LR + N
Sbjct: 230 RFNTAMCDDFNTPEAIAVLFE-----INKELNRAVKEENAEQAAIYYATLRHLTN----- 279
Query: 316 LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADL 375
ILGL+ + + +AL L+ E + LI++R A+K K+F+++D+IR L
Sbjct: 280 --ILGLVQQDVEEFLKSDIGQEALG---LSPEQIEDLIQQRQDAKKAKEFARADEIRQSL 334
Query: 376 TRKGIALMDMGKETIWR 392
+G+ L D + T+WR
Sbjct: 335 LDQGVVLEDTRQGTVWR 351
>gi|451979646|ref|ZP_21928061.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
gi|451763174|emb|CCQ89258.1| Cysteinyl-tRNA synthetase [Nitrospina gracilis 3/211]
Length = 480
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 222/395 (56%), Gaps = 22/395 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L PT +P ++H+ + MI ++ AY EGDV+++V+ P YGRLS + +
Sbjct: 101 MDALNVERPTTEPLATEHIGDMIKMIEGLVKAGKAYPAEGDVYYSVKAFPEYGRLSKRNI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG RV K++P DFALWK +K GEP+WDSPWGPGRPGWHIECSAMS L
Sbjct: 161 EDMQAGARVEPGEHKKDPMDFALWKKSKPGEPAWDSPWGPGRPGWHIECSAMSYQLLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQSC V YW+HNG V N EKMSKSLGNFFTIR I
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSCGFTGKPPVRYWVHNGFVNINKEKMSKSLGNFFTIRDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ +HP LR FL++ HYR P+++S L A + Y+ E A +G A
Sbjct: 281 LKTFHPEVLRLFLLTNHYRGPIDFSDQYLKDAEKNLDRFYEFFAQAESAQG--SRNGGAA 338
Query: 241 RINPAAEDCINK--LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
I AED + L +F M DD NT+ L ++ L+ +N L ++
Sbjct: 339 EI---AEDTLRSQPLLKKFDEAMDDDFNTAVALADMMEE-LRRLNKQLG---------EE 385
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ ++ + ++ ++LGL P Y ++ LK +L + QLI ER
Sbjct: 386 GTDRDAFHRDAATLRHAGQLLGLFYRTPEEYKTEIRALKGGG---QDLDVARIEQLIAER 442
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR +KDF+ +D+ R +L + G+ L D T W
Sbjct: 443 QAARSSKDFATADRCRDELQKMGVVLKDTKTGTTW 477
>gi|416148465|ref|ZP_11602376.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB210]
gi|333364986|gb|EGK47000.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB210]
Length = 428
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 58 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 117
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 118 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 177
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 178 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 237
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 238 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 291
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 292 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 341
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 342 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 391
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 392 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 425
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|384131638|ref|YP_005514250.1| cysS [Acinetobacter baumannii 1656-2]
gi|385236958|ref|YP_005798297.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387124491|ref|YP_006290373.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407932282|ref|YP_006847925.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|417869475|ref|ZP_12514460.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|417872928|ref|ZP_12517811.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|417878946|ref|ZP_12523538.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|417881912|ref|ZP_12526221.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|421203711|ref|ZP_15660846.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|421533834|ref|ZP_15980114.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|421629211|ref|ZP_16069951.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|421687025|ref|ZP_16126761.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|421703081|ref|ZP_16142548.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|421706801|ref|ZP_16146204.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|421790903|ref|ZP_16227093.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|424052919|ref|ZP_17790451.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|424064410|ref|ZP_17801895.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|425755223|ref|ZP_18873045.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|445464068|ref|ZP_21449451.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
gi|445481109|ref|ZP_21455771.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|187631665|sp|A3M419.2|SYC_ACIBT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558609|sp|B2HX34.1|SYC_ACIBC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|342230338|gb|EGT95178.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH1]
gi|342230714|gb|EGT95540.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH3]
gi|342232733|gb|EGT97504.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH2]
gi|342238444|gb|EGU02876.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ABNIH4]
gi|385878983|gb|AFI96078.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-TJ]
gi|398326755|gb|EJN42898.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AC12]
gi|404566489|gb|EKA71635.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-143]
gi|404670997|gb|EKB38866.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab11111]
gi|404673146|gb|EKB40945.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab44444]
gi|407192917|gb|EKE64090.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1122]
gi|407193200|gb|EKE64368.1| cysteinyl-tRNA ligase [Acinetobacter baumannii ZWS1219]
gi|407900863|gb|AFU37694.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TYTH-1]
gi|408702925|gb|EKL48332.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC180]
gi|409988287|gb|EKO44460.1| cysteine--tRNA ligase [Acinetobacter baumannii AC30]
gi|410404321|gb|EKP56389.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-2]
gi|425495265|gb|EKU61454.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-113]
gi|444770795|gb|ELW94937.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-78]
gi|444779964|gb|ELX03936.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC338]
Length = 473
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|421694240|ref|ZP_16133865.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
gi|404568242|gb|EKA73346.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-692]
Length = 473
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 232/393 (59%), Gaps = 18/393 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P PRVS+H+ +I D+I+ +I AYVV+GDV+F + P YG+LSG+ LE
Sbjct: 102 LNVRPADVHPRVSEHLPEIIDLISTLIEKKAAYVVDGDVYFDISAFPEYGKLSGRTLEEM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL + FDI
Sbjct: 162 QAGARVEVDPRKKHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMALKYLGNNFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DL+FPHHENEIAQ+ AA V YWMHNG +T N EKMSKSLGNFF +R+I +R
Sbjct: 222 HGGGFDLVFPHHENEIAQAEAATGRPFVRYWMHNGFITVNQEKMSKSLGNFFLVREILDR 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARI 242
+ P +R FL+S HYRSPL++ ++ +A + +++ AL P +E +I
Sbjct: 282 FPPEVVRFFLLSTHYRSPLDFDDEKMAAAGRGLERFKNSIRLLTEALDRPSRE-----QI 336
Query: 243 NPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
P E+ I L +F A M DD NT+ + G + + + +N+ L+ P + L
Sbjct: 337 EPEDEEFIAALEKHHRDFVAAMDDDFNTA-LAVGIWFELAREVNAYLHG-TAGSPCRAAL 394
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
L + NEV + R+ +L ++ + K L E + L+E R A
Sbjct: 395 EKAMDLFRSFNEVLGLFRV-----DERTGRIL--IEGRHAKSDGLEEALIELLLEVRQQA 447
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D+IR L GI L D W+
Sbjct: 448 RAKKDWATADRIRDRLKELGIILEDTPGGVRWK 480
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 239/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C+ P P+ +++++Q+++MI+ ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCVAPDEAPKATEYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + +Q+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFK-------AYQQVYG 335
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ + + + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 336 QKTVDALEQSFVER----FNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR++ N ILGL+ + + AL L++ D+ LI++R
Sbjct: 387 TVLYSTLRQLTN-------ILGLVQHNVDEFLKSDIGQDALA---LSDTDIEDLIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTIWR 470
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 107 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 166
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 167 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 226
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 227 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 286
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 287 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 340
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 341 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 390
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 391 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 440
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 441 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 474
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 231/385 (60%), Gaps = 25/385 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
++ PR ++++ +I MI +II+N AYV +G VFF V+ P YG+LS Q L++ ++G R+
Sbjct: 110 SFYPRATEYIPKIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD KR+P DF LWK K GEP+W+SPWG GRPGWHIECSAMS L DIH GGID
Sbjct: 170 EVDDVKRSPLDFVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGID 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQ+ AA V YW+HN ++ N EKMSKSLGNF T R +++ PLA+
Sbjct: 230 LVFPHHENEIAQTEAATGKPFVKYWLHNEYILINAEKMSKSLGNFLTARAARQKFPPLAI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAE 247
R F++ AHYRSP+N++ L+ A+ AV + L++C ++ + G+T+ A
Sbjct: 290 RMFMLGAHYRSPINFTPEGLEQAAAAV----ERLRNCWSDLQFAKGGRLGETSAAGAALM 345
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
++ R +F A M DD NT+ + G +A+ +N L +K P + + + K
Sbjct: 346 AALDTFRADFTAAMDDDFNTAAAI-GVIFEAVTEVNKYLKGNEKLDP-----AAVAAAEK 399
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
++ V+ I+G + Q+ K+++ A E LI ER AARK +DF +
Sbjct: 400 FFGDIDSVMGIIG---------IEQEKKEESGDEAARIE----PLIAERNAARKARDFKR 446
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
SD IR +L +GI L D + T W+
Sbjct: 447 SDAIRDELAAQGIILEDTPQGTKWK 471
>gi|372277954|ref|ZP_09513990.1| hypothetical protein PSL1_22904 [Pantoea sp. SL1_M5]
Length = 416
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 231/393 (58%), Gaps = 41/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +P+ +DH+ QI MI ++I AY+ E DV F+ E + +YG+LSGQ ++N
Sbjct: 59 LNVLPPDVEPKPTDHIPQIIAMIERLIQRGHAYITREHDVIFSTETARDYGKLSGQNIDN 118
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R+G RV+V++ K NP DF LWKAAKAGEP W+SPWG GRPGWHIECSAM++++L + FD
Sbjct: 119 LRSGARVSVNTYKNNPLDFVLWKAAKAGEPCWNSPWGVGRPGWHIECSAMNSYHLGTHFD 178
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DLIFPHHENEIAQS +A V+YWMH G VT EKMSKSL NF T+R + E
Sbjct: 179 IHGGGSDLIFPHHENEIAQSTSANDGPYVNYWMHTGMVTVEQEKMSKSLNNFLTLRDMLE 238
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA--LSPFQEHGKTA 240
+Y LR F ++ HYR PLN+S +D+A ++ +Y C +A LS A
Sbjct: 239 QYDGEVLRLFYLTGHYRKPLNFSRCNVDAARSSLTRLYSV---CRLASGLSSMHHEQWQA 295
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M DD NT L F D +FIN +L +S
Sbjct: 296 R---------------FQQAMDDDFNTPKALAVLF-DLTRFINQTL------------VS 327
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL-IEERAAA 359
E + + +K++ +LGL Y E L++ L + ++ DV+ ++ER A
Sbjct: 328 DPEEAKALATTLKQLGNLLGLF----YREPYDWLQNNPL--WDQSQLDVISARVKEREEA 381
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+N++++++D +R L +G+ L D G +T W+
Sbjct: 382 RQNQEWARADALRQWLEEQGVELEDKGGKTHWK 414
>gi|375084700|ref|ZP_09731560.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
gi|374567947|gb|EHR39145.1| cysteine-tRNA ligase [Megamonas funiformis YIT 11815]
Length = 474
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 224/385 (58%), Gaps = 28/385 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P+VS + +I DMI+ +I+ AY + GDV+F+VEK YG+LSG++LE+ AG R+ V+
Sbjct: 112 PKVSQTIPEIIDMISVLIDKGYAYELNGDVYFSVEKFKGYGKLSGRKLEDMMAGARIEVN 171
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
K NP DFALWKAAK GEP W+SPWG GRPGWHIECS MS YL FD HGGG DLIF
Sbjct: 172 ESKHNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSTMSLKYLGKTFDFHGGGSDLIF 231
Query: 133 PHHENEIAQSCAACQD--SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS A C D S YW+HNG +T N EKMSKSLGNFFT+++I ++Y LR
Sbjct: 232 PHHENEIAQSQAYCGDDHSFARYWLHNGFITINQEKMSKSLGNFFTVKEILDKYPAEVLR 291
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
F++S HYRSPL++S +LD A+ +L + AL +E K + E+ I
Sbjct: 292 FFIVSTHYRSPLDFSDARLDEAT-------TSLNRLKNALDNLKELAKNTTDATSGEELI 344
Query: 251 NK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
K + F M DD NT+ + F D K IN N + + ++++ +L
Sbjct: 345 AKAKQCKQNFFEAMDDDFNTALAIANMF-DLSKEINIYYNEVTSGKVACSKVAVDTAL-- 401
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ E+ I+G+L +D L + + +I+ R ARKNKD++
Sbjct: 402 --DVFSEMADIIGILE-----------EDDNSADDGLVDNLMNLIIDIRQNARKNKDWAT 448
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR +L GI L D W+
Sbjct: 449 ADKIRDELKNIGITLEDSPTGVRWK 473
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 230/397 (57%), Gaps = 45/397 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P Y+P+ ++ M +I +M+ +I+ AY + GDV++ V + P+YG+LSG+ +
Sbjct: 103 LGVLKPDYEPKATESMGEILEMVQTLIDKGLAYTADNGDVYYDVSEFPSYGKLSGRDVNE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERVAV+ K +P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMSA+ L FD
Sbjct: 163 LRAGERVAVNEAKTDPLDFVLWKAAKAGEPAWESPWGLGRPGWHIECSAMSANCLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A +V+YWMHNG V ++EKMSKSLGNFFT+R++ E
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGAHGCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC----EVALSPFQEHGK 238
Y A+R+F++S+HYRSPLNY+ QL+ A A+ Y +L++ EV +E G
Sbjct: 283 LYPAEAVRYFILSSHYRSPLNYAEDQLEQAKAALTRFYTSLREVQPQEEVRWQEDKEFGP 342
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
F M DD NT+ L+ + + +LN ++ +Q
Sbjct: 343 -----------------RFKEAMDDDFNTALALS-----VMADVRQALNKAFERGQGIEQ 380
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEE 355
+ L LL G + QQ D L ++++ + L+ E
Sbjct: 381 AAYYAGL---------------LLSFGDVLGLFQQNADAFLVGDTGSDDEAAEIDALVAE 425
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AR +K+++++D+IR LT GI L D +T WR
Sbjct: 426 RNQARADKNWARADEIRDQLTEMGIVLEDAAGKTSWR 462
>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 447
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 77 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 136
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 137 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 196
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 197 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 256
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 257 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 310
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 311 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 360
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 361 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 410
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 411 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 444
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163.1|SYC_AQUAE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 236/398 (59%), Gaps = 14/398 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M +++ P +PRV++H+ +I ++I +++ AYVVEGDV+F+V+K +YG+LS + +
Sbjct: 101 MENIRVRPADVEPRVTEHIPEIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG RV +KR+P DFALWKA+KAGEP+WDSPWG GRPGWH EC AM +L
Sbjct: 161 EELIAGARVEPSEKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DL+FPHHENEIAQ+ A YWMHNG VT +KMSKSLGN+ T+R++
Sbjct: 221 IDIHGGGLDLVFPHHENEIAQAEAITGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YHP LR ++ HYRSPL++S +++ A + ++D E+ K
Sbjct: 281 YTKYHPDVLRLLVLFTHYRSPLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEG 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+P E + + + F+A +SDD NT L+ ++ + LN +K K + +++
Sbjct: 341 GTHPLYEQ-VKEFEENFYASLSDDFNTPEALSHVYK-----LVGELNKVKNKAYSEGKIT 394
Query: 301 LIESLRKIENEVKEVL----RILGLLPPGAYSEV-LQQLKDKALKRAELTEEDVLQ-LIE 354
E L E K +L +I GLL Y E ++++ ++ L+ ++ +E ++Q LIE
Sbjct: 395 DRE-LSAYEFASKSLLNTMKKIFGLL-EDLYPECKVERVVERELEAGQVFDEKLIQILIE 452
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ARK K F +D IR L GI L D T W+
Sbjct: 453 ARNIARKEKVFKVADYIRDKLKELGIVLEDTPAGTKWK 490
>gi|445434059|ref|ZP_21439862.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
gi|444756927|gb|ELW81464.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC021]
Length = 473
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 238/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDHSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 AVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADAIRQSLLEQGVVLEDTRQGTVWR 470
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|400927240|ref|YP_001086515.2| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
gi|347595718|sp|Q18CD5.2|SYC_CLOD6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile 630]
Length = 465
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 108 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 228 LTFPHHENEIAQSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 288 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 347 LDDFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 395
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 396 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 441 DIRQQLLDMGIVLEDTRQGVKWK 463
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
gi|421678924|ref|ZP_16118806.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
gi|410391847|gb|EKP44211.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC111]
Length = 473
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|423080651|ref|ZP_17069270.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
gi|423085098|ref|ZP_17073555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357550746|gb|EHJ32555.1| cysteine--tRNA ligase [Clostridium difficile 050-P50-2011]
gi|357552715|gb|EHJ34482.1| cysteine--tRNA ligase [Clostridium difficile 002-P50-2011]
Length = 467
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 226/384 (58%), Gaps = 29/384 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 110 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 170 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 230 LTFPHHENEIAQSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR-INPAAED 248
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + I E
Sbjct: 290 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEIELVKE- 348
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 349 -LDNFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKC 396
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +
Sbjct: 397 LDEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLA 441
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D IR L GI L D + W+
Sbjct: 442 DDIRQQLLDMGIVLEDTRQGVKWK 465
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQGFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRYLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADAIRQSLLEQGVVLEDTRQGTVWR 470
>gi|423089340|ref|ZP_17077700.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
gi|357558276|gb|EHJ39775.1| cysteine--tRNA ligase [Clostridium difficile 70-100-2010]
Length = 467
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 110 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 170 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 230 LTFPHHENEIAQSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 290 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 349 LDDFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 397
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 398 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 442
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 443 DIRQQLLDMGIVLEDTRQGVKWK 465
>gi|421788727|ref|ZP_16225007.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-82]
gi|410401286|gb|EKP53436.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-82]
Length = 428
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 58 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 117
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 118 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 177
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 178 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 237
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 238 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 291
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 292 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 341
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 342 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 391
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 392 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 425
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 108 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 228 LTFPHHENEIAQSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 288 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 347 LDGFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 395
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 396 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 441 DIRQQLLDMGIVLEDTRQGVKWK 463
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/395 (42%), Positives = 226/395 (57%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV E GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 339 ------------WQEQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPA 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 375 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIRADL KGI L D T WR
Sbjct: 418 KARAERNWTKADQIRADLLSKGIELEDGATGTTWR 452
>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
Length = 413
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 225/395 (56%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV E GDV + V+ P YG+LS + +E
Sbjct: 60 LNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEG 119
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 120 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 179
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 180 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 239
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 240 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 295
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 296 ------------WQEQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPA 331
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 332 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 374
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIR DL KGI L D T WR
Sbjct: 375 QARAERNWAKADQIRTDLLSKGIELEDGATGTTWR 409
>gi|384142630|ref|YP_005525340.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
gi|347593123|gb|AEP05844.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii MDR-ZJ06]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQYLLEQGVVLEDTRQGTVWR 470
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 110 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 170 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 230 LTFPHHENEIAQSEARSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 290 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 349 LDGFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 397
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 398 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 442
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 443 DIRQQLLDMGIVLEDTRQGVKWK 465
>gi|417546818|ref|ZP_12197904.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|421656805|ref|ZP_16097102.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|421664669|ref|ZP_16104805.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|421665433|ref|ZP_16105546.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
gi|421672803|ref|ZP_16112757.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|400384706|gb|EJP43384.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC032]
gi|408503798|gb|EKK05551.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-72]
gi|408711840|gb|EKL57032.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC110]
gi|410378497|gb|EKP31115.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC099]
gi|410390191|gb|EKP42588.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC087]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|417551275|ref|ZP_12202353.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417564947|ref|ZP_12215821.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395556703|gb|EJG22704.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400385730|gb|EJP48805.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 473
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 458
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 226/394 (57%), Gaps = 22/394 (5%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + P P+VS+H+ +I +I ++ AY +GDV+F+V P Y +LS ++L++
Sbjct: 77 LHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDL 136
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AGERV +KR P DFALWKAAK GEPSWDSPWG GRPGWHIECSAMSA YL FDI
Sbjct: 137 CAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDI 196
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS AA YWMH G + KMSKSLGN +R R
Sbjct: 197 HGGALDLIFPHHENEIAQSEAASGKPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTR 256
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGK 238
ALR F +S HYR PL++S + + + Y Y+TL+ D V F + HG+
Sbjct: 257 VDAEALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGE 316
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R EF A M DD N L AL + +N L K P + +
Sbjct: 317 PGR-----------FLQEFEAAMDDDFNCPGALG-----ALSGLFGLMNELTDKPPVKDK 360
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +L+ + + V++V +LGL +L++ +D+A+K + V +L+ ER
Sbjct: 361 ALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRR-RDRAVKERGIDVAQVERLLSERNE 419
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK+K+F+++D++R++L +G+ +MD T W+
Sbjct: 420 ARKSKNFAEADRLRSELKGQGVEIMDTVAGTSWK 453
>gi|421622103|ref|ZP_16063011.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC074]
gi|408696360|gb|EKL41899.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC074]
Length = 428
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 58 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 117
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ER+ V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 118 DDMQAGASERIDVEVEKKHPFDFVLWKHAKKNEPSWASPWGNGRPGWHIECSAMSTCCLG 177
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 178 NHFDIHGGGSDLMFPHHENEIAQSEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIR 237
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 238 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 291
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 292 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAILFE-----LNKELNRAVKEEQADQA 341
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 342 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 391
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 392 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 425
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 234/395 (59%), Gaps = 29/395 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L CL P +PR +DH+++++ MI +++ND AY + GDV++AV+ +YG+LS + L++
Sbjct: 115 LGCLSPDAEPRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDD 174
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V++ KRNP DF LWKAAK EP W S WG GRPGWHIECSAMS L + FD
Sbjct: 175 MQAGSRVEVENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFD 234
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA WMH G + + EKMSKSLGNFFTIR +
Sbjct: 235 IHGGGHDLQFPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA 294
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT--- 239
+Y P +R FL+S+HYRS +N+S LD + +++ +YQ L+ E Q+ GK
Sbjct: 295 KYLPETVRFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAE------QQKGKVLII 348
Query: 240 --ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
A IN A + + +F M+DD N+S ++ F + +N K Q
Sbjct: 349 DEALINNAYASAVGQ---DFIKAMNDDFNSSTAISVLFG-----LARDINKASKAQD--- 397
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+E+ ++ +K + + L +L + LQ + + + + LT+E + LI ERA
Sbjct: 398 ----VETAWQLAQHLKALAQTLNILQQ-PVQQFLQAVIGEVAEDS-LTDEAIDGLIIERA 451
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ NK+F+++D+IR L GI L D T WR
Sbjct: 452 DAKTNKNFARADEIRVQLKEAGIELEDSRAGTTWR 486
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 219/385 (56%), Gaps = 36/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + HM +I +M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG
Sbjct: 108 PDFEPRATLHMAEIIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVEDSKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAA 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+D ++ + P AAE
Sbjct: 288 TIRYFLLSGHYRSQLNYSEDNLKQAKSALARLYTALKDLDLTVEP-----------AAAE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ ++K F M DD NT + F D ++ +N + +++ +
Sbjct: 337 NFVSK----FKQAMDDDFNTPEAYSVLF-DMVREVN------------RLKVTDLAQASA 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ +KE+ +LG+L S + D AE+ E V LI ER AR KD+
Sbjct: 380 LAVRLKELAGVLGILEQDVDSFFKGESND-----AEVAE--VEALIAERNRARAEKDWPA 432
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R L G+ L D + T WR
Sbjct: 433 ADIARDGLNALGVILEDGPEGTTWR 457
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 226/396 (57%), Gaps = 26/396 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P PRVS+ + +I +I +++ AY +GDV+FAV+K +Y +LS + L++
Sbjct: 107 LHLREPDVSPRVSETIPEIVAIIQTLVDKGYAYEAKGDVYFAVDKDEDYAKLSKRNLDDL 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
GERV KR P DFALWKAAK GEPSWDSPWG GRPGWHIECSAMS +L FDI
Sbjct: 167 CQGERVQPGDLKRQPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSEKFLGRTFDI 226
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS +A + YWMH G + KMSKSLGN +R +
Sbjct: 227 HGGALDLIFPHHENEIAQSESATGQTMAKYWMHCGFLDLEGAKMSKSLGNVVRLRDALAK 286
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGK 238
ALR F +S HYR PLN+ L A + Y Y+TL+ D VA F + HG+
Sbjct: 287 VDAEALRFFFLSTHYRHPLNFGEKALQDAEGRMEYFYETLRKVDERVAGKDFGKGPLHGE 346
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
AR EF + M DD NT+ L GA F+N L K P + +
Sbjct: 347 PAR-----------FLTEFESAMDDDFNTAGAL-GALSGLFGFMNE----LTDKPPVKDK 390
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ +L+ + +V+E R+LGL PGA+ L + +D+A++ + +V +L+ ER
Sbjct: 391 PLVGRTLQALREQVRETSRVLGLFEDDPGAW---LLRRRDRAVRERGIDVAEVERLLAER 447
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR KDF+K+DQ+R L G+ +MD T W+
Sbjct: 448 TAARAAKDFAKADQVRGALKTLGVDIMDTPAGTSWK 483
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 226/394 (57%), Gaps = 22/394 (5%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + P P+VS+H+ +I +I ++ AY +GDV+F+V P Y +LS ++L++
Sbjct: 107 LHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDL 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AGERV +KR P DFALWKAAK GEPSWDSPWG GRPGWHIECSAMSA YL FDI
Sbjct: 167 CAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDI 226
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS AA YWMH G + KMSKSLGN +R R
Sbjct: 227 HGGALDLIFPHHENEIAQSEAASGKPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTR 286
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGK 238
ALR F +S HYR PL++S + + + Y Y+TL+ D V F + HG+
Sbjct: 287 VDAEALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGE 346
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R EF A M DD N L AL + +N L K P + +
Sbjct: 347 PGR-----------FLQEFEAAMDDDFNCPGAL-----GALSGLFGLMNELTDKPPVKDK 390
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +L+ + + V++V +LGL +L++ +D+A+K + V +L+ ER
Sbjct: 391 ALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRR-RDRAVKERGIDVAQVERLLSERNE 449
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK+K+F+++D++R++L +G+ +MD T W+
Sbjct: 450 ARKSKNFAEADRLRSELKGQGVEIMDTVAGTSWK 483
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIENFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|445406289|ref|ZP_21431727.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
gi|444781577|gb|ELX05494.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-57]
Length = 473
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 222/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+E+I DM+ +++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIEEIIDMVERLLERGHAYVAADGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ T
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEENLKQARAALERLYTAIKDVDL----------TVAA 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+PA E +F A M DD NT + F D ++ IN + + + I
Sbjct: 333 DPAEE-----FVAKFKAAMDDDFNTPEAYSVLF-DMVREIN------------RLKTTDI 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ +K++ +LGLL A + E ++++V + LI ER A
Sbjct: 375 AKASALAVAMKQLADVLGLLSQDP----------SAFFKGEGSDDEVAEIEALIVERNRA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R L G+ L D T WR
Sbjct: 425 RTEKDWAAADVARNRLNELGVVLEDGPSGTTWR 457
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 232/390 (59%), Gaps = 33/390 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P VSDHM +I +++ ++ AY+V+GDV+++VEK +YG+LSG+ +E+ +AG RV VD
Sbjct: 113 PTVSDHMTEIINIVEGLVAKGYAYIVDGDVYYSVEKFNDYGKLSGRDIEDMKAGARVDVD 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK +P DFALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIF
Sbjct: 173 ERKHHPMDFALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIF 232
Query: 133 PHHENEIAQSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS A ++S V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR
Sbjct: 233 PHHENEIAQSEAFVEESQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK---TARINPAAE 247
F++S HYRSPL++S +L A ++L+ A+ + GK A N A E
Sbjct: 293 FFVLSTHYRSPLDFSDERLSEAQ-------RSLERLRTAVENVLQLGKMPDAANENKADE 345
Query: 248 --DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML---KKKQPKQQQLSLI 302
+ ++F M DD NT+ ++ F A K IN N + K + + +L
Sbjct: 346 LVKVARQAEEDFCKAMDDDFNTALAISVMFGLA-KEINVYYNGVIAGKVQHTAKGYTALR 404
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E+ + N I+G+ +Q+ K EL E+ + +IE R AR+N
Sbjct: 405 ETYFMMAN-------IIGIF--------VQEQTGKVDDSQELVEQLMDIIIEIRQHARQN 449
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D++R L GI L D + W+
Sbjct: 450 KDWATADKVRDSLGAVGIVLEDSPQGVRWK 479
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 240/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C+ P P+ +++++Q+++MI+ +++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCVAPDEAPKATEYIDQMQNMISTLVDKGAAYPATNGDVYFEVTKFDKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
E + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 337 -----KTVETLEQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+L +LR++ N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TALYSTLRQLTN-------ILGLVQHDVDEFLKSDIGQEALT---LSDTEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTIWR 470
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 228/405 (56%), Gaps = 51/405 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++H++Q+ MI ++I+N AY + GDV++AV + YG+LSG+ L
Sbjct: 101 AALGVIRPDVEPKATEHVQQMLGMIQRLIDNGKAYAADNGDVYYAVREFATYGQLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VD KR+P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMS
Sbjct: 161 DDLRAGERVEVDGFKRDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA----CQ---------DSNVSYWMHNGHVTNNNEKM 167
FDIHGGG DL FPHHENEIAQSC A C +S+V YW+HNG + +NEKM
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKM 280
Query: 168 SKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE 227
SKSLGNFFTIR++ E+Y +R F++ AHYRSPLNYS L+ A A+ +Y L++
Sbjct: 281 SKSLGNFFTIREVLEKYDAEVVRFFILRAHYRSPLNYSDAHLNDAKGALTRLYTALKN-- 338
Query: 228 VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN 287
+P E +N A D + F A M+DD T + F+ A N
Sbjct: 339 ---TPPAEFA----VNENANDYTRR----FFAAMNDDFGTVEAIAVLFELA--------N 379
Query: 288 MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE 347
+ K NE+ L+ LG + G Q+ L+ E
Sbjct: 380 EVNKTNS---------------NELAGCLKALGSI-IGLLQRDPQEFLQGGSVSDGLSNE 423
Query: 348 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ LIE+R AR K++++SD+IR L + I L D T WR
Sbjct: 424 EIESLIEQRKQARAEKNWAESDRIRDLLNAENIILEDGAGGTTWR 468
>gi|421797751|ref|ZP_16233787.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
gi|410395945|gb|EKP48230.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-21]
Length = 473
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ER+ V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERIDVEVEKKHPFDFVLWKHAKKNEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAILFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 224/394 (56%), Gaps = 24/394 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H+E I I ++ AY V+F V+K YG+LSG +L
Sbjct: 101 MKALKVKPADIYPRVTEHIEDIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS+ YL
Sbjct: 161 EELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVHYWLHTGFVMVKGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+YS L A + + +Y TL++ +A+ +
Sbjct: 281 LQRYSPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWD 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQ 298
+ A + I + R +F+ M DD NT+ L F+ +++++N + + ++PK+
Sbjct: 341 ENDFKAYNSIKEARRKFYEAMDDDFNTAEALKAVFE-----VSNAINKYITEAEKPKES- 394
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
LRK + V I G+ + ++A+ E+ + LI+ RA
Sbjct: 395 -----VLRKAWEFFRTVGEIFGIF-----------EEYFKEEKAKEEEKLIELLIQVRAE 438
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK + F +D+IR +L + GI L D GKETIW+
Sbjct: 439 LRKERKFELADKIREELRKLGIQLEDKGKETIWK 472
>gi|421648270|ref|ZP_16088677.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|408515631|gb|EKK17214.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
Length = 428
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 58 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 117
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ER+ V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 118 DDMQAGASERIDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 177
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 178 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 237
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 238 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 291
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 292 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 341
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 342 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 391
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 392 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 425
>gi|421675648|ref|ZP_16115568.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
gi|421693049|ref|ZP_16132696.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|404559102|gb|EKA64374.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-116]
gi|410381910|gb|EKP34471.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC065]
Length = 473
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + + L L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEVLA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|417552874|ref|ZP_12203944.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|417561155|ref|ZP_12212034.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|421199231|ref|ZP_15656395.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|421456054|ref|ZP_15905397.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|421632844|ref|ZP_16073487.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|421805171|ref|ZP_16241064.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
gi|395523737|gb|EJG11826.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC137]
gi|395565198|gb|EJG26846.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC109]
gi|400211152|gb|EJO42115.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-123]
gi|400393133|gb|EJP60179.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-81]
gi|408707563|gb|EKL52846.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-13]
gi|410409769|gb|EKP61693.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-694]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWPSPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427426577|ref|ZP_18916628.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425696633|gb|EKU66338.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-136]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALT---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTVWR 470
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 225/375 (60%), Gaps = 28/375 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + + +I ++I+ AYVV+GDV+F K YG+LS + +E AG RV
Sbjct: 108 TKNPRATEEIPDMITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ +K +P DFALWKA K GEP+W SPWG GRPGWH+ECS M+ YL DIH GG D
Sbjct: 168 DLSEKKEDPLDFALWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +W+HNG+V NNEKMSKSLGNFFT+R+I E+YHP AL
Sbjct: 228 LIFPHHENEIAQSEAATGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIEKYHPEAL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR PLN+S+ ++ A A+ IY+ ++ E + E G + N +
Sbjct: 288 RLFMLQAHYRKPLNFSLDLIEQAESALKRIYKCYENLEYLIR--NETGSNSS-NSTLKAS 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + + +F M DDLNT+ TG + ++ IN+ N K + L
Sbjct: 345 LEQFKIKFIDAMEDDLNTAEA-TGYLFEMVREINTHANTCSK-----------DVLILAR 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ +KE+ ILG+L E +Q +D+ ++L+L+E+R ARK K+F+++D
Sbjct: 393 DTLKELCGILGIL------EQYEQKEDE-------IPLEILELVEKRNQARKAKNFAEAD 439
Query: 370 QIRADLTRKGIALMD 384
+IR +L G ++D
Sbjct: 440 RIRDELKSLGYIVLD 454
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71.1|SYC_ACIBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YW+H G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 227/397 (57%), Gaps = 55/397 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV E GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D +
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKD----------------V 326
Query: 243 NPAAEDCINKLRD----EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
P ED +KL + +F+ M+DD NT L+ FQ L + K
Sbjct: 327 PPQTED--SKLDEYWQVQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNS 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEE 355
+L +L+ + ILG L Q ++ ++ L EE+ L QLI E
Sbjct: 373 PALAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAE 415
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AR ++++K+DQIRADL KGI L D T WR
Sbjct: 416 RLQARAERNWAKADQIRADLLSKGIELEDGATGTTWR 452
>gi|409405694|ref|ZP_11254156.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
gi|386434243|gb|EIJ47068.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. GW103]
Length = 463
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 233/403 (57%), Gaps = 56/403 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR + ++ ++ D+I ++ N AY +GDV ++V P YG+LSG+ L
Sbjct: 103 AALGVQRPDHEPRATKYVPKMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERV V++ KR+P DF LWKAAK EP WDSPWG GRPGWHIECSAMS+ L
Sbjct: 163 DDLRAGERVDVNTGKRDPLDFVLWKAAKPSEPDEAKWDSPWGCGRPGWHIECSAMSSDLL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DL FPHHENEIAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GDHFDIHGGGQDLQFPHHENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R + ++Y P LR F++ AHYRSPLNYS LD A A+ +Y L+D
Sbjct: 283 RDVLKKYDPEVLRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKD------------ 330
Query: 238 KTARINPAAEDCINKLRDEFHAR-----MSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+ P A L DE HA+ ++DD NT ++ F+ + + +N + +
Sbjct: 331 ----VPPEAGGL---LADESHAQRFTEALNDDFNTPMAVSVLFE-----LANEVN--RDR 376
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVL 350
P Q + ++K + ILGLL P Y LK L + ++
Sbjct: 377 SPVQAR------------QLKALAGILGLLQRAPDEY------LKGGVAAADGLGQAEIE 418
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
LIE R AA+ KDF+++D++RA LT GI L D G T WR
Sbjct: 419 ALIEARKAAKAGKDFAEADRLRAVLTEAGIILEDKPGGLTEWR 461
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ER+ V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERIDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|352101164|ref|ZP_08958587.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
gi|350600648|gb|EHA16709.1| cysteinyl-tRNA synthetase [Halomonas sp. HAL1]
Length = 468
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 223/393 (56%), Gaps = 36/393 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L LPPT++PR + H++ I MI +I AY + GDV++ V K NYG+L+ ++L
Sbjct: 104 ARLFVLPPTHEPRATGHIDDIVAMIETLIAKGFAYAADNGDVYYRVRKFANYGKLNNRQL 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ R+G RV VD K +P DF LWKAAK GE W SPWG GRPGWHIECSAMS L
Sbjct: 164 DDMRSGARVDVDVHKEDPLDFVLWKAAKPGEAHWSSPWGNGRPGWHIECSAMSTCCLGDT 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR +
Sbjct: 224 FDIHGGGPDLTFPHHENEIAQSEAATGKTYVNTWMHAGAVRVNKEKMSKSLGNFFTIRDV 283
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P +R L+++HYRSP+NYSV L A ++ +Y L+ +
Sbjct: 284 LAEHDPEVVRFLLVASHYRSPINYSVDSLTEARKSLTRLYTALEGVDT------------ 331
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ A + R+ F M DD NT L F+ + +N K++QP +
Sbjct: 332 --DAIASSEASPYRERFTQVMDDDFNTPEALAVMFE-----LAREVNRAKQEQPDEAA-- 382
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++ E+K++ ILGLL P + + QQ + L+E ++ I +R
Sbjct: 383 ------RLGGELKQLGAILGLLQQAPQIFLKGTQQ------QGMPLSESEIEAKIAQRIE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A+ NKDF+++D IR +L+ GI L D + T W
Sbjct: 431 AKANKDFAQADAIRDELSALGIILKDSREGTSW 463
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 238/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q+++MI +++ AY GDV+F V K NYGRLSG++L
Sbjct: 103 ANLGCAEPDEAPKATEYIDQMQNMIGTLVDKGAAYPAANGDVYFEVSKFNNYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
E + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 337 -----KTVETLEQGFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +ALK L++ ++ I++R
Sbjct: 387 TMLYSTLRHLTN-------ILGLVQHDVDEFLKSDIGQEALK---LSDTEIENFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTIWR 470
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/395 (42%), Positives = 226/395 (57%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV E GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWHSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 339 ------------WQEQFNQAMNDDFNTPVALSILFQ------------LAHEVNKSNSPA 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 375 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIRADL KGI L D T WR
Sbjct: 418 QARAERNWAKADQIRADLLSKGIELEDGATGTTWR 452
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 225/395 (56%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV E GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 339 ------------WQEQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPA 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 375 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIR DL KGI L D T WR
Sbjct: 418 QARAERNWAKADQIRTDLLSKGIELEDGATGTTWR 452
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
gi|384359372|ref|YP_006197224.1| cysteinyl-tRNA synthetase [Clostridium difficile BI1]
Length = 465
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 225/383 (58%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 108 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 228 LTFPHHENEIAQSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 288 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 347 LDDFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 395
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 396 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 441 DIRQQLLDMGIVLEDTRQGVKWK 463
>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
Length = 420
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 221/383 (57%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+ ++ QI + I ++ AY V GDV+F K YG+LSGQ +++ AG R+
Sbjct: 64 TVHPQVTQNIPQIIEFIQELEEKGYAYAVNGDVYFDTRKFEGYGKLSGQNIDDLEAGARI 123
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 124 EVNEQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 183
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A YWMHNG++ NNEKMSKS GNFFT+R I+++Y +
Sbjct: 184 LTFPHHENEIAQSEARSGKPFAKYWMHNGYINVNNEKMSKSKGNFFTVRDISKKYDLEIV 243
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL+SAHY+SP+N+S L A + +Y T + LS + G+ A +
Sbjct: 244 RFFLLSAHYKSPVNFSDDLLAQAGAGLERLYNTKEKLVFTLSHLE--GEMTDAEKALVEE 301
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DDLNT+ +T F+ + KFIN +++ K+ ++ L+
Sbjct: 302 LDGFRKKFVEVMDDDLNTADAITAIFELS-KFINLNVDENSSKEFAEKCLAEF------- 353
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
NE+ VL I + + KD ++ + +V LI++R A+KNKDF+K+D
Sbjct: 354 NELTGVLNI------------VNKEKDNSV------DAEVEALIQQRTDAKKNKDFAKAD 395
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 396 AIRQQLLDMGIVLEDTRQGVKWK 418
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| cysteine--tRNA ligase [Clostridium bartlettii DSM 16795]
Length = 474
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 224/383 (58%), Gaps = 26/383 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
+ P+V+D++EQI + ++ + AY V GDV+F +K +YG+LSG + E AG R+
Sbjct: 116 SVHPQVTDNIEQIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARI 175
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP W SPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 176 EVNDQKRHPMDFVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQD 235
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + +YW+HN ++ NNEKMSKSLGNFFT+R+I+E Y +
Sbjct: 236 LKFPHHENEIAQSEARSGKNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEIYDLEVV 295
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++S HYR+P+N+S L+ + + +Y + E ++ E K +D
Sbjct: 296 RLFMLSTHYRNPINFSDEILNQSKAGLERLYNAKEKAEFTINNL-EDSKMTEEEAKLQDE 354
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ R +F M DD+NT+ ++ F+ A KF+NS++ K+ Q+ L
Sbjct: 355 LASFRQKFIDAMDDDVNTADAVSAIFELA-KFMNSNITENSSKEFAQKALDEF------- 406
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
NE+ VL I+ KD K+ ++ +E++ +LIE+R A+KNK+F +D
Sbjct: 407 NELTGVLNIVN--------------KD---KKEDILDEEIEKLIEQRTEAKKNKNFQLAD 449
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L KGI L D + W+
Sbjct: 450 EIRQQLLDKGIVLEDTRQGVKWK 472
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 228/388 (58%), Gaps = 37/388 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V++H+ +I +M+ +I AY VEG+V+FAV+ +YG+LSG+ LE +AG RV
Sbjct: 108 TVHPKVTEHIPEIIEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD +K+NP DFALWK AK GEP W+SPWGPGRPGWHIECSAMS YL FDIHGGG D
Sbjct: 168 EVDEKKKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGAD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENE+AQS A YWMHNG +T N EKMSKSLGNFF +R+I E++ +
Sbjct: 228 LVFPHHENEVAQSEAFTGKPFARYWMHNGFITVNQEKMSKSLGNFFLVREILEKFPGRVV 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAED 248
R FL+S HYRSPL++ +L+ A A+ + +Q+ EV P + ARI E
Sbjct: 288 RFFLLSTHYRSPLDFDDKKLNEAKAALERVDNFVQNLKEVNPLPGE-----ARIE-IQEK 341
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL---NMLK-KKQPKQQQLSLIES 304
N LRD F+ M DD NT+ + F+ ++F N+ + N+ K+ ++ L++
Sbjct: 342 ITNFLRD-FNEAMEDDFNTAQAMASLFE-LVRFGNTQIASGNLTAGDKKLFEEALNVYTQ 399
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+ IE V E + + P + E+ LIE RA +K K
Sbjct: 400 VFGIEFGVLEKIAGEDITP---FVEL---------------------LIEVRARLKKEKK 435
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D IR +L ++GI L D K W+
Sbjct: 436 YDLADFIRDELKKQGIILEDTPKGVRWK 463
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/405 (40%), Positives = 236/405 (58%), Gaps = 35/405 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L T PRVS+H+++I +MI I+ N AY ++GDV+F+VE YG+LSG+ LE
Sbjct: 102 AALGVREATVHPRVSEHLDEIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ +AG RV VD+RKR+P DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ YL F
Sbjct: 162 DMQAGARVDVDTRKRHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGF 221
Query: 122 DIHGGGIDLIFPHHENEIAQ--SCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQ + A C YWMHNG +T N EKMSKSLGNFFT+R+
Sbjct: 222 DIHGGGFDLIFPHHENEIAQAEAYAGC-GPFARYWMHNGFITVNEEKMSKSLGNFFTVRE 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I +Y P +R +++S HYRSPL++ +L+ ++ ++ L + E L + G+
Sbjct: 281 ILAKYDPEVVRFYMLSTHYRSPLDFDDTKLEMNRKSLSRLHNALDNIESILKT-NKFGEV 339
Query: 240 ARINPAAEDCINKL--------RDEFHARMSDDLNTSHILTGAF---QDALKFINSSLNM 288
NP E + L RD F M DD NT+ + F +D+ FI+++ +
Sbjct: 340 E--NPELEKALADLLRAREKAVRD-FEEAMDDDFNTALAIAVLFDLARDSNAFIHAATSA 396
Query: 289 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 348
+L++ ++ +V + LG +VL + + + +
Sbjct: 397 GGD--------ALLQEVKGALQQVFDTFMKLG--------QVLGLFEKRGTQGDTGLVDR 440
Query: 349 VLQLIEE-RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++Q+I + R+ AR KD++ +D IR L GI + D + W+
Sbjct: 441 LMQIILDIRSEARARKDWATADGIRNKLNELGIIIEDSPQGARWK 485
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/383 (41%), Positives = 225/383 (58%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D+++QI + I ++ + AY V GDV+F K YG+LSGQ+ E+ AG R+
Sbjct: 110 TVHPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ +KR+P DF LWKA K GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 170 EVNDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A YWMHNG++ N+EKMSKS GNFFT+R I++ Y +
Sbjct: 230 LTFPHHENEIAQSEARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDISKLYDLEIV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYR+P+N+S L+ A + +Y T + E LS E T + ++
Sbjct: 290 RFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELVKE- 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ R +F M DD+NT+ ++ F+ A K INS+++ + S +E +K
Sbjct: 349 LDDFRQKFIDAMDDDVNTADAVSVIFELA-KLINSNVD----------ENSSLEFAKKCL 397
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+E E+ +L ++ + KD L ++D+ +LI++R A+KNK+F +D
Sbjct: 398 DEFNELTGVLN---------IVNKKKDTVL------DKDIEELIQKRTDAKKNKEFQLAD 442
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + W+
Sbjct: 443 DIRQQLLDMGIVLEDTRQGVKWK 465
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 221/392 (56%), Gaps = 38/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR ++++ Q+ ++I ++ N AY V +GDV F+V K P YG+LSG+ L
Sbjct: 101 AALGVEKPDHEPRATEYVPQMLELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKAL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VD K +P DF LWK A+ GEPSW SPWG GRPGWHIECSAMS+ L
Sbjct: 161 DDLRAGERVDVDGTKEDPLDFVLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A Q V+YWMHNG V ++EKMSKSLGNF TI++I
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEGAHQCRFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+Y P LR F++ AHYRSPLNYS LD A A+ +Y L +TA
Sbjct: 281 LRKYDPEVLRFFILRAHYRSPLNYSDTHLDDARQALSRLYTAL--------------RTA 326
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+P + D F M DD NT F + + LN + + +
Sbjct: 327 NTDPPSIDWDEPHALRFRDAMDDDFNTPEACAVLFD-----LAAELN-------RSKSAT 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L LR + + + R + A SE ELT E + LI ERAAA+
Sbjct: 375 LAGQLRGLAGLLGLLGRDPQVFLQAAPSE-----------GGELTAEQIESLISERAAAK 423
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D+IRADL G+ L D T WR
Sbjct: 424 AQKDYTAADRIRADLLSAGVVLEDGASGTRWR 455
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 227/401 (56%), Gaps = 27/401 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M +L L +PR + H+E++ + +++ AY+ G D++F V + P YG+LSG+
Sbjct: 99 MDELNVLKADVEPRATRHIEEMIQVTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E ++G R+A D K +P DFALWK AK GEPSWDSPWG GRPGWH+EC+AMS YL
Sbjct: 159 IEELQSGSRIAPDEEKEDPLDFALWKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGI 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENE AQS AA V YW+HNG V ++EKMSKSLGNF TIR
Sbjct: 219 PFDIHGGGQDLAFPHHENEKAQSEAAFDREFVKYWVHNGFVRVDSEKMSKSLGNFITIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I + +H LR FL++ HYRSPL+YS L+ A+ +Y + L +E
Sbjct: 279 IMKDFHGEVLRFFLLTKHYRSPLDYSDGSLEETEKALKRVYWAKTGLQKELQ--KEKWSK 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ P A + L ++ M DDLNT+ + F + + ML+ K
Sbjct: 337 GQGFPEASQELQDLASKWDQAMQDDLNTAEAVGYVF----GLVRLANRMLEDK------- 385
Query: 300 SLIESLRKIENEVKEVLRILGLLPP-----GAY----SEVLQQLKDKALKRAELTEEDVL 350
+ RK E + + ++LG+L G + E L+QLK R ++ + V
Sbjct: 386 ----TFRKSEAGKEIIQQMLGMLEGWGDALGVFQRSGEEFLEQLKLMRCNRLDIDPQTVQ 441
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+++ +R ARK+KDF +D IR +LT KGI +MD + W
Sbjct: 442 EMVLKRQQARKDKDFETADNIREELTAKGIEVMDTPEGPRW 482
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 220/389 (56%), Gaps = 34/389 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM+ I M+ +I AYV+ GDV++ + +YGRLSG+++E+ AG R+ V+
Sbjct: 114 PRVSEHMDDIIHMVETLIQKGHAYVLGGDVYYDISTFKDYGRLSGRKIEDMLAGARIEVN 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
KRNP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIF
Sbjct: 174 DEKRNPGDFALWKAAKPGEPFWESPWGKGRPGWHIECSAMSIHYLGKTFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C C V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR
Sbjct: 234 PHHENEIAQSEGCTGCH--FVDYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALR 291
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTARINPAAED 248
+FL+S HYRSPL++S +L+ A + L+D V +E + + A E
Sbjct: 292 YFLLSTHYRSPLDFSDDRLEEAEKNM----DKLKDVIGRVKELSGREGSEVTEASKALEK 347
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
FH M DD NT + TGA + K IN N + + SL K
Sbjct: 348 AAEDDMKVFHEAMDDDFNTG-LATGAMFELAKAINVYYNDVHSGIGFNKA-----SLEKA 401
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE----DVLQLI-EERAAARKNK 363
K +L ILG+L +K K+ E ++ D++ +I R +ARK K
Sbjct: 402 GKAFKTILDILGIL-------------EKEWKKTEAYDDKDYNDLMNVILAVRQSARKAK 448
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D+IR L GI + D W+
Sbjct: 449 QYQLADEIRDKLGEIGIVIEDTPTGARWK 477
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452949314|gb|EME54782.1| cysteinyl-tRNA ligase [Acinetobacter baumannii MSP4-16]
Length = 473
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TMLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 226/395 (57%), Gaps = 51/395 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + H+E I +I +++ AYV + GDV + V+ P YG+LS + +E
Sbjct: 103 LNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+G RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ H L +FD
Sbjct: 163 LVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA +YW+H G + N EKM+KS+GNF+TI + +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATGKPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC--EVALSPFQEHGKTA 240
+HP +R+FL+S+HYRSPLNYS L +A A+ +YQ ++D + A S E+
Sbjct: 283 EHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEY---- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+++F+ M+DD NT L+ FQ L + K +
Sbjct: 339 ------------WQEQFNQAMNDDFNTPVALSVLFQ------------LAHEVNKSNSPA 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL---QLIEERA 357
L +L+ + ILG L Q ++ ++ L EE+ L QLI ER
Sbjct: 375 LAHTLKNLAG-------ILGFL----------QKDPESFLQSGLAEEEKLVIEQLIAERL 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR ++++K+DQIRADL KGI L D T WR
Sbjct: 418 QARAERNWAKADQIRADLLSKGIELEDGATGTTWR 452
>gi|424060453|ref|ZP_17797944.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
gi|404668405|gb|EKB36314.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii Ab33333]
Length = 473
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 235/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|363893842|ref|ZP_09320936.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
gi|361963344|gb|EHL16422.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium ACC19a]
Length = 466
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 232/385 (60%), Gaps = 32/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++++I D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+
Sbjct: 108 TVHPRVTENIKEIIDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ KR P DFALWK K GE WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINDEKRAPIDFALWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + L
Sbjct: 228 LIFPHHENEIAQSEARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAED 248
R F++SAHYRSP+NYS L+ A ++ + +++C+ L+ + KT E+
Sbjct: 288 RFFMLSAHYRSPINYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKEN 343
Query: 249 C--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ + + F +M+DDLNT+ +T F D +KF N+++++ K QQ L ++
Sbjct: 344 VAYLQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML---- 398
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
NE+ VL I DKA + ++ + + +LIE+R A+K+KDF+
Sbjct: 399 ---NELTAVLNI---------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFA 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
K+D+IR +L + GI + D + W
Sbjct: 439 KADEIRDELKQMGIEIKDTRQGVQW 463
>gi|399889684|ref|ZP_10775561.1| cysteinyl-tRNA ligase [Clostridium arbusti SL206]
Length = 465
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ ++ I + + +++ AY ++GDV+F+ EK YG+LSGQ LE +G R+
Sbjct: 108 TANPRATEFIDDIINFVKDLVDKKFAYEIDGDVYFSTEKFEKYGKLSGQNLEELESGVRI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK++P DFA+WK K GEP+W SPWG GRPGWHIECS M+ L DIH GG+D
Sbjct: 168 NVDERKKDPMDFAIWKKQKEGEPAWKSPWGFGRPGWHIECSCMAHKLLGDTIDIHAGGMD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS + +YWMH+ ++ NN+KMSKSL NF T R E++ P +
Sbjct: 228 LVFPHHENEIAQSESRNGKKFANYWMHSAYLNINNQKMSKSLNNFLTARDALEKFDPEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR+ LNYS LDS A+ +Y ++ + E L + +
Sbjct: 288 RFLMLSAHYRTQLNYSPDLLDSDKSALERLYNSIDNLENLLGEVKFEKLKKEEKEYLNN- 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+N RD++ +M DD NT+ ++ F D K INS++N+ K+ Q L+LI L K
Sbjct: 347 LNSYRDKYIEKMDDDFNTADAISVIF-DLSKDINSNINIESSKEIIQTALNLIRELGK-- 403
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
P G +LQ++ K L ++++ +LIEER AR+ K+F+ SD
Sbjct: 404 -------------PLG----ILQKVTKKDL------DKEIEKLIEERQKAREEKNFALSD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR DL KGI L+D + W+
Sbjct: 441 KIRDDLKAKGIVLLDTPQGVRWK 463
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 225/392 (57%), Gaps = 20/392 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H+E I D + ++ AY V+F V++ +YG+LSG +L
Sbjct: 99 MKALKVKPADIYPRVTEHIEDIIDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKL 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV KRNP DFALWK AK GEP WDSPWG GRPGWHIECS MS YL +
Sbjct: 159 EELRKGARVEPGEGKRNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQ 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YW+H G V EKMSKSLGNF TIR++
Sbjct: 219 FDIHGGGNDLIFPHHENEIAQTEACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIREL 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+Y+ + A + + +Y T+++ +AL + K +
Sbjct: 279 LQRYSPEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWS 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + I + + +F+ M DD NT+ + F+ A +N L ++K PK+
Sbjct: 339 KEEFELYEVIREAKRKFYEAMDDDFNTAEAMKPIFEVA-NAVNKYLAKVEK--PKES--- 392
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LRK K V + G+ Y + ++ K++ L + LI+ RA R
Sbjct: 393 ---VLRKALEFFKMVGEVFGIFE--EYFKETKETKEEEL---------IELLIQVRAELR 438
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K+++ +D+IRA+L GI L D + TIW+
Sbjct: 439 KQKNYALADKIRAELRELGIQLEDTPQGTIWK 470
>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 468
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/383 (43%), Positives = 220/383 (57%), Gaps = 26/383 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+D+ME I + I ++I+ D AY GDVF+ K +YG+LS Q L+ + G R+
Sbjct: 110 TLNPRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK NP DF LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDKRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+
Sbjct: 230 LQFPHHECEVAQSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+F++S HYR+PLNYS ++ A ++V + + E L K +++ D
Sbjct: 290 RYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADK 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I+ + EFH +M DD NT +T FQ A S N L K+ +L E LR
Sbjct: 349 ISAVLVEFHEKMQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAANLHEVLRAF- 401
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
NE+ VLRI+ EL +E++ LI ER ARKNK+++++D
Sbjct: 402 NEMNSVLRIVN------------------TGTDELLDEEIEALIAERVEARKNKNWARAD 443
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L +GI L D + WR
Sbjct: 444 EIRDKLADEGIVLEDTAQGMRWR 466
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 225/392 (57%), Gaps = 33/392 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L PT +PR + H+++I+ M+ +I+ AY + GDV++AV + P YG+LSG+
Sbjct: 101 AALGVLAPTSEPRATAHIDEIQTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSGKDP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG RV VD KR+P DFALWK AK GEPSW SPWG GRPGWHIECSAMS L +
Sbjct: 161 QDLRAGARVEVDEAKRDPLDFALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCLGNH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + WMHNG V N EKMSKSLGNFFT+R++
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSEGATGEPFAEVWMHNGFVRINEEKMSKSLGNFFTVREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ER+ +R+F++++HYRSPLNY+ QL SA A+ +Y L+ A +P + T
Sbjct: 281 LERFRAEEIRYFILTSHYRSPLNYADEQLQSARGALTRLYTALRGLPEAEAPAESAFAT- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
F A M DD NT L F+ + +N + +Q +
Sbjct: 340 ---------------RFTAAMDDDFNTPEALAVLFE-----LAREVNRARDAGEPEQAAA 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L LR++ ++G+L + + L+ L + + +I +R AAR
Sbjct: 380 LGAELRRLGG-------VIGILQ----DDPERYLRGGDGGTDGLDDAAIESMIAQRQAAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+D++++D++R LT GI L D + T WR
Sbjct: 429 AARDWAEADRLRDALTEAGIVLEDGAQGTTWR 460
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/404 (39%), Positives = 232/404 (57%), Gaps = 17/404 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L PPT +P+ ++H+ ++ +I ++I AY GDV+F V YG+LS + L
Sbjct: 101 MAALGTEPPTLEPKATEHLPEMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRAL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ R+G R+AV+ K +P DF LWK +K EP+W+SPWGPGRPGWHIECSAM YL
Sbjct: 161 DEMRSGARIAVNELKEDPLDFVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A ++W+H+G VT +EKM+KSLGNF TIR +
Sbjct: 221 FDIHGGGKDLVFPHHENEIAQSEGATGKPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG--- 237
++Y LR L S HYR+P++YS + A A+ +Y L A+ G
Sbjct: 281 LKQYPAEVLRLLLFSTHYRNPVDYSEAAMADAETALSRLYAAL----AAVGKLPAGGAPE 336
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T+ I ++ L +FH M D N++ L G F D +K IN +++ P
Sbjct: 337 ATSVITAKDRQKLDNLESDFHQAMDIDFNSAKAL-GRFFDTVKIINK----VRQALPATP 391
Query: 298 QLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+E LR +++E+ I GLL P AY L + +++ L ++T ++ +L+ +
Sbjct: 392 ATRDLELLRDSAAKLRELGGIFGLLQEDPAAY---LARRQERLLAGLDITPGEIEKLLAQ 448
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQ 399
R AR+N D++++D+IR L K IA+ D T W + V Q
Sbjct: 449 RQTARQNGDWAEADRIRDLLAAKKIAIKDGPDGTSWEVQLSVHQ 492
>gi|402838090|ref|ZP_10886604.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
gi|402273799|gb|EJU22990.1| cysteine--tRNA ligase [Eubacteriaceae bacterium OBRC8]
Length = 466
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 232/385 (60%), Gaps = 32/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++++I D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+
Sbjct: 108 TVHPRVTENIKEIIDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ KR P DFALWK K GE WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINDEKRAPIDFALWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + L
Sbjct: 228 LIFPHHENEIAQSEARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAED 248
R F++SAHYRSP+NYS L+ A ++ + +++C+ L+ + KT E+
Sbjct: 288 RFFMLSAHYRSPINYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKEN 343
Query: 249 C--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ + + F +M+DDLNT+ +T F D +KF N+++++ K QQ L ++
Sbjct: 344 VAYLQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML---- 398
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
NE+ VL I DKA + ++ + + +LIE+R A+K+KDF+
Sbjct: 399 ---NELTGVLNI---------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFA 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
K+D+IR +L + GI + D + W
Sbjct: 439 KADEIRDELKQMGIEIKDTRQGVQW 463
>gi|421652216|ref|ZP_16092579.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425750916|ref|ZP_18868870.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|445457362|ref|ZP_21446507.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
gi|408506489|gb|EKK08197.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC0162]
gi|425484701|gb|EKU51101.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-348]
gi|444776942|gb|ELX00979.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC047]
Length = 473
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 235/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS + + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEVSTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTEALDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQV 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQDALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|363891501|ref|ZP_09318680.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
gi|361965558|gb|EHL18540.1| cysteine-tRNA ligase [Eubacteriaceae bacterium CM2]
Length = 466
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 232/385 (60%), Gaps = 32/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++++I D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+
Sbjct: 108 TVHPRVTENIKEIIDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ KR P DFALWK K GE WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINDEKRAPIDFALWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + L
Sbjct: 228 LIFPHHENEIAQSEARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAED 248
R F++SAHYRSP+NYS L+ A +++ + +++C+ L+ + KT E+
Sbjct: 288 RFFMLSAHYRSPINYSKDMLNQAKNSL----ERIKNCKNNLNFILTKIDKTDMSEQEKEN 343
Query: 249 CI--NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ + + F +M+DDLNT+ +T F D +KF N+++++ K QQ L ++
Sbjct: 344 VVYLQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML---- 398
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
NE+ VL I DK + ++ + + +LIE+R A+K+KDF+
Sbjct: 399 ---NELTGVLNI---------------AMDKTDEDVDVAK--IEELIEQRNIAKKSKDFA 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
K+D+IR +L + GI + D + W
Sbjct: 439 KADEIRDELKQMGIEIKDTRQGVQW 463
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter oleivorans DR1]
Length = 473
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCAAPDEAPKATEYIDQMQNMIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QMYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRYLTN-------ILGLVQHNVDDFLKSDIGQEALT---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTVWR 470
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 227/396 (57%), Gaps = 41/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + ++ I MI ++I AY + GDV+FAVE P+YG+LS ++L
Sbjct: 100 AKLGVLSPNEEPRATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+PADFALWKAAK GE SW SPWG GRPGWHIECSAMS L
Sbjct: 160 EDLVAGARVDVQEAKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + V WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 220 FDIHGGGPDLLFPHHENEIAQSECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R+FL+S+HYRS ++YS L A + +Y L+
Sbjct: 280 LEKYPAEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALRG--------------- 324
Query: 241 RINPAAE-DCINKLRD-EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
I PA E D D F M DD NT+ + L + + +N +++ +
Sbjct: 325 -IVPAKEADVAETDHDRRFAEVMDDDFNTAGAIA-----VLHAVANDINHYRREGDE--- 375
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
E+ ++ + + +LGLL P A+ + A +ELT ED+ +I+ R
Sbjct: 376 ----EAAKRSAAVLVRLGAVLGLLQQNPEAFFQ--------ADTGSELTAEDIEAMIQAR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A ARK KDF+++D+IR DL KGI L D + T WR
Sbjct: 424 ADARKAKDFAEADRIRDDLLEKGIILDDSREGTTWR 459
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 234/395 (59%), Gaps = 29/395 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L C P +PR +D++++++ MI +++ND AY + GDV++AV+ +YG+LS + L++
Sbjct: 115 LGCQSPNAEPRATDYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDD 174
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V++ KRNP DF LWKAAK EP W S WG GRPGWHIECSAMS L + FD
Sbjct: 175 MQAGSRVEVENDKRNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFD 234
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA WMH G + + EKMSKSLGNFFTIR +
Sbjct: 235 IHGGGHDLQFPHHENEIAQSEAATGCEYARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA 294
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y P +R FL+S+HYRS +N+S LD A +++ +YQ L+ E Q+ G+T +
Sbjct: 295 KYLPETVRFFLLSSHYRSQVNFSDSALDEAHNSLSRLYQALKVVE------QQKGQTLIV 348
Query: 243 NPAAEDCINKLR-----DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ A IN +F M+DD N+S ++ F L + K
Sbjct: 349 DDA---LINNAYASAPGQDFIKAMNDDFNSSTAISVLFG------------LARDINKAS 393
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
++ IES ++ ++K + + L +L + LQ + +A + LT+E + LI ERA
Sbjct: 394 KVEDIESAWQLAQQLKALAQTLNILQQ-PVQQFLQAVIGEAAEDG-LTDEAIDSLIIERA 451
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ NK+F+++D+IR L GI L D T WR
Sbjct: 452 DAKTNKNFARADEIRIQLKDAGIELEDSRAGTTWR 486
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 224/400 (56%), Gaps = 45/400 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +P+ ++ ++ + MI +I+ AY GDVF++V YG+LSG+ L
Sbjct: 101 AKLGVLRPDLEPKATEFVDGMLSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV VDS K++P DF LWKAAK GEPSW+SPWG GRPGWHIECSAMS+H+L
Sbjct: 161 EDLRAGERVEVDSFKKDPMDFVLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA-------CQDSNVSYWMHNGHVTNNNEKMSKSLGN 173
FDIHGGG DL FPHHENEIAQS AA CQ V+YWMHNG V ++EKMSKSLGN
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEAAHSHDGKPCQ--MVNYWMHNGFVRVDDEKMSKSLGN 278
Query: 174 FFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF 233
FFTIR + E+Y +R F++ AHYRSPLNYS L+ A A+ +Y L+ +V+
Sbjct: 279 FFTIRTVLEQYDAEVIRFFILRAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAI 338
Query: 234 Q-EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+H AR F M DD NT + F D +N K K
Sbjct: 339 DWQHPYAAR---------------FKLAMDDDFNTPEAMAVLF-DLANEVN------KTK 376
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ L +K + +LGLL + + + E DV +
Sbjct: 377 STEAAGL------------LKGLASVLGLLSRKSDEFLQAKTNANGAANDGAAELDVDAM 424
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I +R A++ K+F+++D+IR +L GI L D + T WR
Sbjct: 425 IVKRLEAKQAKNFAEADRIRKELAEAGIILEDTPQGTTWR 464
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 233/385 (60%), Gaps = 31/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++++ +I D + ++I+ AY V+GDV+F +K +YG+LSGQ LE+ +AG R+
Sbjct: 108 TVNPRATEYINEIVDFVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WK+ K GEP+W SPWG GRPGWHIECS M+ + L DIH GG D
Sbjct: 168 SVDERKKDPMDFAVWKSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENE+AQS A + YWMH+ V NNEKMSKSL NFFT R+I E+Y +
Sbjct: 228 LAFPHHENEVAQSEARTGKTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILEKYDSDVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-- 247
R F++S HYR+ +N+S+ L+S A+ +Y ++ + E S +E + ++ E
Sbjct: 288 RLFMLSGHYRTQINFSMESLESMKAAMDRLYNSISNLE---SLLEETKQEELMDQEVEYI 344
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
++ ++++ +M DD NT+ ++ F D ++ IN+++ + K+ + L+LI+ L K
Sbjct: 345 KILDGYKEKYIEKMDDDFNTADAVSVIF-DLIRDINTNVKIDSSKKLIKHCLNLIKELGK 403
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
P G +LQ+ K L EE + LIEER ARK+K+++
Sbjct: 404 ---------------PLG----ILQKSKKGNL------EEKIEALIEERQQARKDKNWAL 438
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
SD+IR DL +GI L D + W+
Sbjct: 439 SDKIRDDLKEQGILLEDTPQGVRWK 463
>gi|375134138|ref|YP_004994788.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 -----KTTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALS---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTVWR 470
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 237/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCAAPDEAPKATEYIDQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFIERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHDVDAFLKSDIGQEALT---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTVWR 470
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 223/392 (56%), Gaps = 42/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ +D + +I+ ++ +I AY GDV+F V+ +YGRLSG++ +
Sbjct: 104 LNILRPDIEPKATDFIPEIQQLVNTLIEKGHAYAATNGDVYFKVKSFESYGRLSGKKQDE 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV V+ K++P DF LWKA+KA EP+WDS WG GRPGWHIECSAMS + + D
Sbjct: 164 LEAGARVEVNPNKQDPMDFVLWKASKANEPAWDSAWGQGRPGWHIECSAMSGSCIGERLD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V +NEKMSKSL NFFTIR++ +
Sbjct: 224 IHGGGMDLQFPHHENEIAQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLK 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
YHP +R+FL+S+HYRSPLNY++ LD A + +Y L+ A I
Sbjct: 284 DYHPEVIRYFLLSSHYRSPLNYTIENLDIAKTNLARLYTALE--------------AATI 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P + +F+ M DD NT + F+ L K+ K QQ L+
Sbjct: 330 QPGLVAVGTEFEAKFNDAMDDDFNTPQAMAVLFE------------LVKEVNKTQQPELV 377
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L+ + N LGLL P + K + + L++E + LI ER AR
Sbjct: 378 GLLQSLANR-------LGLLTETPEFF------FKSQVGQPDGLSDEAIEALIVERTQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K++++SD+IR DL KG+ L+D + T WR
Sbjct: 425 ADKNWARSDEIRDDLLAKGVELLDSKEGTSWR 456
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 105 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 165 LQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 225 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ T
Sbjct: 285 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDL----------TVAA 334
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA E + +F A M DD NT + F D ++ IN + K ++
Sbjct: 335 APAEEFIV-----KFKAAMDDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKA 379
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+L ++ +VL +LG P A + E ++++V + LI ER A
Sbjct: 380 SALAVAMKQLADVLGLLGQDP-------------DAFFKGEGSDDEVAEIEALIVERNRA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R L G+ L D T WR
Sbjct: 427 RSEKDWAAADVARNRLDILGVVLEDGPSGTTWR 459
>gi|445443240|ref|ZP_21442575.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
gi|444762811|gb|ELW87163.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-A-92]
Length = 473
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L CL P P+ +++++Q+++MI ++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCLAPDEAPKATEYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ +++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 283 DVMDKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 337 T-----TTETLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALA---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 437 AKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWR 470
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 220/393 (55%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 105 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 165 LQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 225 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ T
Sbjct: 285 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDL----------TVAA 334
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA E + +F A M DD NT + F D ++ IN + K ++
Sbjct: 335 APAEEFIV-----KFKAAMDDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKA 379
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+L ++ +VL +LG P A + E ++++V + LI ER A
Sbjct: 380 SALAVAMKQLADVLGLLGQDP-------------DAFFKGEGSDDEVAEIEALIVERNRA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D T WR
Sbjct: 427 RSEKDWPAADVARNRLNELGVVLEDGPSGTTWR 459
>gi|424742026|ref|ZP_18170361.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-141]
gi|422944458|gb|EKU39454.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-141]
Length = 428
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q+++MI ++N AY GDV+F V K YGRLSG++L
Sbjct: 58 ANLGCAAPDEAPKATEYIDQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKL 117
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L
Sbjct: 118 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLG 177
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 178 NLFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 237
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A ++ Y + + + Q +G+
Sbjct: 238 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQ------QVYGQ 291
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
T E + F+ M DD NT+ + F+ +N LN K++ Q
Sbjct: 292 T-----TTESLDQSFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQADQA 341
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR + N ILGL+ + + +AL L++ ++ I++R
Sbjct: 342 TVLYSTLRHLTN-------ILGLVQHNVDDFLKSDIGQEALT---LSDAEIEDFIQQRVD 391
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + T+WR
Sbjct: 392 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTVWR 425
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 220/404 (54%), Gaps = 53/404 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++H+ Q+ MI ++ N AY GDV++AV + YG+LSG+ L++
Sbjct: 118 LGVLRPDIEPKATEHIGQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDD 177
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD+ KR+P DF LWKAAK GEPSW+SPWG GRPGWHIECSAM FD
Sbjct: 178 LRAGERVDVDANKRDPLDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFD 237
Query: 123 IHGGGIDLIFPHHENEIAQSCAA----CQ-----------DSNVSYWMHNGHVTNNNEKM 167
IHGGG DL FPHHENEIAQSC A C +S+V YW+HNG + +NEKM
Sbjct: 238 IHGGGADLQFPHHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKM 297
Query: 168 SKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE 227
SKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A +++ +Y TL + +
Sbjct: 298 SKSLGNFFTIRDVLKKYAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQ 357
Query: 228 VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN 287
A +E N F A M DD NT+ ++ F+
Sbjct: 358 AAEFAVREDA-------------NDYTRRFFAAMDDDFNTAEAMSVLFE----------- 393
Query: 288 MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE 347
L + K L L+ + LGLL + Q + L+ +
Sbjct: 394 -LANEANKTGSAELAGCLKALGG-------TLGLL-----QDDPQHFLQSGGEEGGLSAD 440
Query: 348 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
++ LI +R AR+ K++++SD+IR L I L D T W
Sbjct: 441 EIEALITQRKTARETKNWAESDRIRDLLAEHKILLKDGADGTTW 484
>gi|363890596|ref|ZP_09317922.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
gi|361964885|gb|EHL17890.1| cysteinyl-tRNA synthetase [Eubacteriaceae bacterium CM5]
Length = 466
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 231/385 (60%), Gaps = 32/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++++I D I +I+ AYV+ DV+F V+K YG+LS + +++ +G R+
Sbjct: 108 TVHPRVTENIKEIIDFIQDLIDKGFAYVLGNDVYFEVKKFKEYGKLSHKNIDDLLSGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ KR P DFALWK K GE WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINDEKRAPIDFALWKGKKEGEIGWDSPWGQGRPGWHIECSVMSNKYLGESIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNFFT+R + + + L
Sbjct: 228 LIFPHHENEIAQSEARSSHTFANYWMHNGYINVDNEKMSKSLGNFFTVRDVLKEFDGDTL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAAED 248
R F++SAHYRSP+NYS L+ A ++ + +++C+ L+ + KT E+
Sbjct: 288 RFFMLSAHYRSPINYSKDMLNQAKSSL----ERIKNCKNNLNFILTKIDKTDMSEQEKEN 343
Query: 249 C--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ + + F +M+DDLNT+ +T F D +KF N+++++ K QQ L ++
Sbjct: 344 VAYLQECKTNFIDKMNDDLNTADAITAIF-DLVKFANTNVSIDSSKVFVQQTLDML---- 398
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
NE+ VL I DKA + ++ + + +LIE+R A+K+KDF+
Sbjct: 399 ---NELTGVLNI---------------AMDKADEDVDVAK--IEELIEQRNIAKKSKDFA 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
K+D IR +L + GI + D + W
Sbjct: 439 KADTIRDELKQMGIEIKDTRQGVQW 463
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 229/405 (56%), Gaps = 51/405 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++H++Q+ MI ++I+N AY + GDV++AV + YG+LSG+ L
Sbjct: 101 AALGVIRPDVEPKATEHVQQMLGMIQRLIDNGKAYAADNGDVYYAVREFAAYGQLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VDS KR+P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMS
Sbjct: 161 DDLRAGERVEVDSFKRDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELFGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA----CQ---------DSNVSYWMHNGHVTNNNEKM 167
FDIHGGG DL FPHHENEIAQSC A C +S+V YW+HNG + +NEKM
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIRVDNEKM 280
Query: 168 SKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE 227
SKSLGNFFTI ++ E+Y +R F++ AHYRSPLNYS LD A A+ +Y L++
Sbjct: 281 SKSLGNFFTICEVLEKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKN-- 338
Query: 228 VALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN 287
+P E A + N F A M+DD T + F+
Sbjct: 339 ---TPPAEF--------AVSENANDYTRRFFASMNDDFGTVEAMAVLFE----------- 376
Query: 288 MLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE 347
L + K L L+ + ++GLL + L+ L+ ++ L+ E
Sbjct: 377 -LANEVNKTNSTELAGCLKALGG-------VIGLLQ----RDPLEFLQGGSVSDG-LSNE 423
Query: 348 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ LI +R AR K++++SD+IR L + I L D T WR
Sbjct: 424 EIESLIAQRKQARAEKNWAESDRIRDLLNAENIILEDGAGGTTWR 468
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 226/393 (57%), Gaps = 35/393 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR ++H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ
Sbjct: 111 FAKLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQD 170
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ RAG R+ V+ KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL +
Sbjct: 171 ITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGT 230
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R
Sbjct: 231 HFDIHGGGSDLIFPHHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRD 290
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I R+ ++R FL+SAHYR PLNYS + A ++ +Y Q + + S ++H
Sbjct: 291 ILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--- 345
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ R F M DD NT L F+ + +N L +
Sbjct: 346 -----------DAWRARFCEAMDDDFNTPQALAILFE-----LTREINRLCGTNDDEAA- 388
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L +L+ + N +LGLL A L+ D L AEL + + +LI +R+ A
Sbjct: 389 ALATTLKDLGN-------VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEA 436
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 437 RRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 469
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 226/393 (57%), Gaps = 35/393 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR ++H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ
Sbjct: 100 FAKLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQD 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ RAG R+ V+ KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL +
Sbjct: 160 ITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGT 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R
Sbjct: 220 HFDIHGGGSDLIFPHHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRD 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I R+ ++R FL+SAHYR PLNYS + A ++ +Y Q + + S ++H
Sbjct: 280 ILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--- 334
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ R F M DD NT L F+ + +N L +
Sbjct: 335 -----------DAWRARFCEAMDDDFNTPQALAILFE-----LTREINRLCGTN-DDEAA 377
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L +L+ + N +LGLL A L+ D L AEL + + +LI +R+ A
Sbjct: 378 ALATTLKDLGN-------VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEA 425
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 426 RRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 458
>gi|402309177|ref|ZP_10828173.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
gi|400373296|gb|EJP26230.1| cysteine--tRNA ligase [Eubacterium sp. AS15]
Length = 466
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 229/386 (59%), Gaps = 32/386 (8%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
T PRV++++++I I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R
Sbjct: 107 ATVHPRVTENIKEIIGFIQVLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELVSGAR 166
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
+ V+ +K++P DFALWK K GE WDSPWG GRPGWHIECS MS YL S DIH GG
Sbjct: 167 IDVNEQKKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGSNIDIHSGGQ 226
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS + +YWMHNG++ +N KMSKSLGNFFT+R + + Y
Sbjct: 227 DLIFPHHENEIAQSECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDV 286
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR F++++HYRSP+NYS LDSA ++ +++C+ +L + + ++ +D
Sbjct: 287 LRFFMLTSHYRSPINYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKD 342
Query: 249 C---INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
+ ++ F +M+DDLNT+ +T F D +K N+S+N K Q LS++
Sbjct: 343 ILENVQAIKSTFIGKMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSML--- 398
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
NE+ VL I A +E K E + +LIE R A+K+KDF
Sbjct: 399 ----NELTAVLNI-------ANNE----------KAEEQDTSKIEELIELRNQAKKSKDF 437
Query: 366 SKSDQIRADLTRKGIALMDMGKETIW 391
+K+D+IR +L + GI + D + T W
Sbjct: 438 AKADEIREELRKMGIEIKDTRQGTQW 463
>gi|387813875|ref|YP_005429358.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338888|emb|CCG94935.1| cysteinyl-tRNA synthetase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 463
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/394 (43%), Positives = 227/394 (57%), Gaps = 37/394 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + ++ I MI ++I AY + GDV+FAVE P+YG+LS ++L
Sbjct: 100 AKLGVLSPNDEPRATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+PADFALWKAAK GE SW SPWG GRPGWHIECSAMS L
Sbjct: 160 EDLVAGARVDVQEAKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + V WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 220 FDIHGGGPDLLFPHHENEIAQSECATGHTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R+FL+S+HYRS ++YS L A + +Y L+ + P K A
Sbjct: 280 LEKYPAEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALR----GIVP----AKGA 331
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ D F M DD NT+ + L + + +N +++ +
Sbjct: 332 DVAETDHD------RRFAEVMDDDFNTAGAIA-----VLHAVANDINHYRREGDE----- 375
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
E+ ++ + + +LGLL P A+ + A +ELT ED+ +I+ RA
Sbjct: 376 --EAAKRSAAVLVRLGAVLGLLQQNPEAFFQ--------ADTGSELTAEDIEAMIQARAD 425
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK KDF+++D+IR DL KGI L D + T WR
Sbjct: 426 ARKAKDFAEADRIRDDLLEKGIILDDSREGTTWR 459
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/408 (40%), Positives = 236/408 (57%), Gaps = 31/408 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + P+VSDHM +I +++ +++ AY +GDV+F V + +YG+LSG+ LE+
Sbjct: 102 LNVMMADIHPKVSDHMAEIIELVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDM 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG RV V+ +KR+P DFALWKAAK GEPSW+SPWG GRPGWHIECSAMS YL FD+
Sbjct: 162 LAGARVEVNEKKRDPMDFALWKAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDM 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS AA + YW+HNG +T N EKMSKSLGNFF +R+I ++
Sbjct: 222 HGGGADLIFPHHENEIAQSEAATGEPLARYWLHNGFITVNQEKMSKSLGNFFLVREILDK 281
Query: 184 YHPLALRHFLISAHYRSPLNY-----SVLQ--LDSASDAVFYIYQTLQDCEVALSPFQEH 236
+ P +R FL+ HYRSPL++ +V++ LD ++ + + Q V S
Sbjct: 282 FSPEVVRFFLLGTHYRSPLDFDDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAK 341
Query: 237 GKTARINP------AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
K AR+ ++ K++ F M DD NT+ + G+ + K N + L
Sbjct: 342 EKPARVTSIIDTRHSSMKAFIKIKTSFEQAMEDDFNTA-LAVGSLFELAKETNILVQSLG 400
Query: 291 KKQPKQQQLSLIES--LRKIENEVKEVLRILGLLPPGAYSEVL---QQLKDKALKRAELT 345
K +Q++ L+++ L K+ N+V G + E L L + +
Sbjct: 401 PKISEQEKACLLQAAELFKLFNQVL-----------GIFKEDLCTGYPLVTPVDESGDGM 449
Query: 346 EEDVLQ-LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E V+Q L++ R ARKNK+++ SD+IR L + L D + T W+
Sbjct: 450 LEAVMQMLLDIRNEARKNKNWALSDRIRDALKDINVILEDTPQGTRWK 497
>gi|440785439|ref|ZP_20962196.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
gi|440218335|gb|ELP57557.1| cysteinyl-tRNA ligase [Clostridium pasteurianum DSM 525]
Length = 465
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/388 (39%), Positives = 229/388 (59%), Gaps = 33/388 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + I + +++ AY V+GD++F+ EK +YG+LSGQ LE +G R+
Sbjct: 108 TANPRATEFIYDIISFVKDLVDKGYAYEVDGDIYFSTEKFKDYGKLSGQDLEQLESGVRI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK+NP DFA+WK K GEP+W+SPWGPGRPGWHIECS M+ L DIH GG+D
Sbjct: 168 NVDERKKNPMDFAIWKKQKDGEPAWESPWGPGRPGWHIECSCMAHKLLGDTIDIHAGGMD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS + +YWMH+ ++ NN+KMSKSL NF T R E++ +
Sbjct: 228 LVFPHHENEIAQSESRNGKKFANYWMHSAYLNVNNQKMSKSLNNFLTARDALEKFDYEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR+ LNYS L+S+ A+ +Y ++ + E L E +++ ++
Sbjct: 288 RFLMLSAHYRTQLNYSPELLESSKSALDRVYNSIYNLESLL----EKSTVSKLKDDEKEY 343
Query: 250 INKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
++ L RD++ +M DD NT+ ++ F D ++ +NS+L++ K+ + +SLI L
Sbjct: 344 LDNLKSYRDKYIEKMDDDFNTADAISVIF-DIVRDVNSNLDINSSKEIVEASISLIRELG 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
K P G +LQ+ L+R ++ +LIEER ARK K+F+
Sbjct: 403 K---------------PLG----ILQKSTKVDLER------EIEKLIEERQKARKEKNFA 437
Query: 367 KSDQIRADLTRKGIALMDMGKETIWRPC 394
+D+IR DL KGI L+D + W+
Sbjct: 438 LADKIRDDLKDKGIILLDTPQGVRWKKA 465
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 226/393 (57%), Gaps = 35/393 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR ++H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ
Sbjct: 120 FAKLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQD 179
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ RAG R+ V+ KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL +
Sbjct: 180 ITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGT 239
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R
Sbjct: 240 HFDIHGGGSDLIFPHHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRD 299
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I R+ ++R FL+SAHYR PLNYS + A ++ +Y Q + + S ++H
Sbjct: 300 ILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--- 354
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ R F M DD NT L F+ + +N L +
Sbjct: 355 -----------DAWRARFCEAMDDDFNTPQALAILFE-----LTREINRLCGTNDDEAA- 397
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L +L+ + N +LGLL A L+ D L AEL + + +LI +R+ A
Sbjct: 398 ALATTLKDLGN-------VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEA 445
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 446 RRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 478
>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
Length = 468
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 218/383 (56%), Gaps = 26/383 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+D+ME I + I ++++ D AY GDVF+ K +YG+LS Q L+ + G R+
Sbjct: 110 TLNPRVTDNMENIIEFIQELVDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK NP DF LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDKRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+
Sbjct: 230 LQFPHHECEVAQSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+F++S HYR+PLNYS +D A ++V + + E LS K ++
Sbjct: 290 RYFMLSTHYRNPLNYSDEVMDQAQNSVERLANAAANIEHRLST-AIGSKDDEVSQEVAGK 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I+ + EFH +M DD NT +T FQ A S N L K+ L E LR
Sbjct: 349 ISAVLGEFHQKMQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAADLHEVLRAF- 401
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
NE+ VLRI+ +L +E++ LI ER ARKNK+++++D
Sbjct: 402 NEMNGVLRIVN------------------TGTGDLLDEEIEALIAERIEARKNKNWARAD 443
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L +GI L D + WR
Sbjct: 444 EIRDKLADEGIVLEDTAQGMRWR 466
>gi|406040789|ref|ZP_11048144.1| cysteinyl-tRNA ligase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 473
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L C P P+ +++++Q+++MI ++ N AY GDV++ V K YGRLSG++L
Sbjct: 103 ASLGCAEPDESPKATEYIDQMQNMIGTLVENGTAYPSSNGDVYYEVTKFAKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AKA EPSW SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKANEPSWQSPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS AA + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLLFPHHENEIAQSEAATGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S L A A+ Y + E Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDTALKEAKTALTRFYHAFKAYE------QTYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ ++ + F++ M DD NT + F +N LN K+Q +Q
Sbjct: 337 I-----HSDQLDHEFIERFNSAMRDDFNTPEAMAVLFD-----LNRELNRAVKEQCAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+LR + ILGL+ + + +AL L ++++ LI++R
Sbjct: 387 ALYYATLRHLTT-------ILGLVQHNVDEFLKSDIGQQALS---LNDDEIEALIQQRHD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L KG+AL D + T+WR
Sbjct: 437 AKKAKDFAKADGIRQSLLEKGVALEDTRQGTVWR 470
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 227/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+E+I +++ +++ + AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMVRPDIEPRATQHIEEIIELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R+FL+S HYRS LNYS L A A+ +Y L+D VA + E + AR
Sbjct: 283 HFDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGEE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +++
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
+L ++E+ +LG +LQQ + LK E EE ++ +LI ER AR
Sbjct: 377 AALGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 230/390 (58%), Gaps = 34/390 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T+ PR ++H+E+I D++ ++ + AY V+G V+F V P YG+LS Q +E ++G R+
Sbjct: 110 THYPRATEHIEEIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+S KRNP DF LWKA K GEP+WDSPWG GRPGWHIECSAM+ YL + DIH GG D
Sbjct: 170 EVNSSKRNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQ+ AA ++ V YW+HN ++ + EKMSKSLGNF T R+ + Y PLA+
Sbjct: 230 LTFPHHENEIAQAEAATEEVFVRYWLHNEYILIDKEKMSKSLGNFMTAREARKHYSPLAI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED- 248
R F++SAHYRSP+N+ L A+ A+ + L +C S F+ + R + +D
Sbjct: 290 RMFMLSAHYRSPVNFGPEGLQQATAAL----ERLHNC---WSDFR-YAADNRPHSQGQDD 341
Query: 249 ---CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
I + RD+F A M DD NT+ + F+ A+ +N L K E +
Sbjct: 342 IVESIKRHRDDFVAAMDDDFNTAGAIGHIFE-AVSTVNGHL--------KGNDSLSSEGI 392
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ IE+ ++V I+GL+ G S+ Q D E++ LI +R AR KDF
Sbjct: 393 KAIEDFFRDVDSIMGLI--GLDSD--GQDDDS---------EEIESLIRKREEARSAKDF 439
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWRPCV 395
+ SD IR L KG+ L D + T W+ +
Sbjct: 440 ATSDAIRDQLAAKGVILEDTPQGTKWKKKI 469
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/392 (42%), Positives = 218/392 (55%), Gaps = 41/392 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L CL PT +PR ++ + + MI +I AY GDV+F V YG LS +
Sbjct: 101 AALGCLLPTAEPRATESVGDMVAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG RV +D K +P DF LWKA K G+PSWD+P+GPGRPGWHIECSAMS L +
Sbjct: 161 DDLRAGARVEIDEAKTDPLDFVLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGAT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YWMHNG V N EKMSKSLGNFFT+ ++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSECATGHHYVNYWMHNGFVRINEEKMSKSLGNFFTVAEV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YHP +R F++S+HYRSPLNYS LD+A ++ Y ++D +P
Sbjct: 281 MRQYHPEVIRLFVLSSHYRSPLNYSDQNLDAARASLTRWYTAIKDAPQNGTP-------- 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
NP ++ F M DD NT L F+ S LN K +
Sbjct: 333 --NP-------EVMARFRGVMDDDFNTPEALAIVFEQI-----SELNRSKDANCA----A 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I+++ +I N LG P ++ D +L++E + Q I ERA+AR
Sbjct: 375 TIKAIGEILN--------LGQHDPESFLRWAPSSSD------QLSDEAIEQKIAERASAR 420
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKDF+ SD+IR +L GI L D +T WR
Sbjct: 421 ANKDFAASDRIRDELQAAGIVLEDKAGQTTWR 452
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|385779993|ref|YP_005689158.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419721338|ref|ZP_14248502.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419726884|ref|ZP_14253904.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|187629806|sp|A3DH43.1|SYC_CLOTH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380769849|gb|EIC03749.1| cysteinyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380782508|gb|EIC12142.1| cysteinyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 468
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 225/385 (58%), Gaps = 31/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR +++++ I +MI ++ AY V+GDV+F+ K YG+LS Q LE+ G R+
Sbjct: 108 TVHPRATENIDAIIEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK++P DFALWKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG D
Sbjct: 168 DVDERKKDPMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA +W+HNG + + EKM+KS GNFFT+R I + + +
Sbjct: 228 LVFPHHENEIAQSEAANGKPFARFWLHNGFINVDGEKMAKSKGNFFTVRDIAKTFDYEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S L+ A + + IY L + E +EH + +I + +
Sbjct: 288 RFFMLSAHYRSPINFSAELLEQAKNGLERIYNCLDNLEY----LKEHAQAEKITDSEREL 343
Query: 250 INKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
N+L + +F M DD+NT+ + F D +K +N+++N + SL SL
Sbjct: 344 QNRLLGIKAKFIEAMDDDINTADAIAAIF-DIVKEVNTNINATSNSSKEIIDFSL--SL- 399
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+KE+ +LG + Q+ + K L ++++ +LIE R ARK KD+
Sbjct: 400 -----IKELGGVLG---------IAQKSRQKVL------DKEIEELIERRQKARKEKDWK 439
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
+D+IR L GI L D + W
Sbjct: 440 TADEIRDKLKEMGIILEDTPQGVKW 464
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ ++
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ I K F A M DD NT + F D ++ IN + K ++
Sbjct: 333 -APAEEFIAK----FKAAMDDDFNTPEAYSVLF-DMVRDIN---------RLKATDIAKA 377
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+L ++ +VL +LG P A + E ++++V + LI ER A
Sbjct: 378 SALAVAMKQLADVLGLLGQDP-------------DAFFKGEGSDDEVAEIEALIVERNRA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D T WR
Sbjct: 425 RSEKDWVAADVARNRLDILGVVLEDGPSGTTWR 457
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 233/388 (60%), Gaps = 29/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P+ ++H+ I +++ ++ + AY V+GDVFFAV K +YG+LS Q LE +G RV V+
Sbjct: 113 PKATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVN 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+K +P DF LWK +K GEPSW+SPWG GRPGWHIECSAMS YL +FD H GG+DL+F
Sbjct: 173 DKKEDPLDFVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVF 232
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENEIAQ+ A V+YW+HNG++ + EKMSKSLGNFFT R I + Y LR F
Sbjct: 233 PHHENEIAQNEAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDILQDYSAEVLRFF 292
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 252
LIS HYRSP+N+S +LD+A+ ++ Q LQ+ L + + A + P ++ + +
Sbjct: 293 LISKHYRSPINFSDAELDNAAKSL----QRLQNTVNKLKDLLDRDR-ADLKPGNKEELQE 347
Query: 253 L-------RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
L R++F M DDLNT+ + GA + K +N +N + Q ++I L
Sbjct: 348 LEKKIKAKREKFEEAMDDDLNTA-LAIGALHELAKELNIVVN---DADFELNQANII-VL 402
Query: 306 RKIENEVKEV-LRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
K + KE+ ++LG+ L+ + LT + + L+E R AR+N+D
Sbjct: 403 EKAYDTFKELSQQVLGI-----------NLETEDDISDNLTSDLIGLLLEVRNKARQNQD 451
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +DQIR +L+ GI L D + T W+
Sbjct: 452 WELADQIRDELSELGIILEDTPQGTDWK 479
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 241/397 (60%), Gaps = 27/397 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L T +P+ ++H+++I +I ++ + AY ++GD++++V+K +YG+LSG++L
Sbjct: 101 MDALNIKRATIEPKATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV +D RK NP DFALWK+ K GEP W+SPWG GRPGWHIECSAMS+ YL
Sbjct: 161 EDMEAGARVEIDERKNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A + YW+HNG V N+EKMSKSLGNF I+ I
Sbjct: 221 FDIHGGGKDLIFPHHENEIAQSEGAFEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHP ++R FL+S HYRSP++++ ++ + A+ IY +Q E + A
Sbjct: 281 LKSYHPDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVE----------EIA 330
Query: 241 RINPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
I +D IN ++F M DD NT+ + G D+++ IN +L + +
Sbjct: 331 DI--TGKDFINYPEGYWEKFCESMDDDFNTAKGI-GYLFDSVRHIN---RLLDENSNSDE 384
Query: 298 QLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
++I S I +++++ ++G+L P Y + K K ++ ++ + L+++
Sbjct: 385 IKTIINS---IYADIRKMGDVIGILSEPAEIY---FNKKKTKFIETKDVDPSLIDALVKQ 438
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ARK KD+ K+D+IR L+ + + D + +IW+
Sbjct: 439 RFEARKAKDWKKADRIRDKLSGIDVIIEDKPEGSIWK 475
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2.1|SYC_SHEAM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 219/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P+++PR + H+++I DM+T++++ AYV +GDV F V YGRLSGQ LE
Sbjct: 103 LNMVRPSFEPRATLHIDEIIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDENKRNPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A ++ +Y L+ ++ +
Sbjct: 283 HYDAQTVRYFLLSGHYRSQLNYSEDNLKQARASLERMYTALKGLDLTVEA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A++ +++ F A M DD NT + F D ++ IN + K ++
Sbjct: 333 -AGADEFVSR----FMAAMDDDFNTPEAYSVLF-DMVREIN---------RLKTSDMAAA 377
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L E+ EVL IL P E Q + A + AE+ LI ER AR
Sbjct: 378 SQLGVALKELAEVLGILSSTP-----EAFLQGEGNADEVAEIE-----ALIVERNRARAE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ +D R L G+ L D + T WR
Sbjct: 428 KDWPAADVARDRLNALGVVLEDGPEGTTWR 457
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 225/391 (57%), Gaps = 42/391 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ +D + +I+ ++ +I AY GDV+F V+ +YGRLSG++ E+
Sbjct: 104 LNILRPDIEPKATDFIPEIQQLVNTLIEKGHAYAAPNGDVYFKVKSFESYGRLSGKKQED 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV ++ K++P DF LWKA+K EP+WDS WG GRPGWHIECSAMS + + D
Sbjct: 164 LEAGARVEINPNKQDPMDFVLWKASKENEPAWDSAWGQGRPGWHIECSAMSGSCIGERLD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V +NEKMSKSL NFFTIR++ +
Sbjct: 224 IHGGGMDLQFPHHENEIAQSECAHGEHYVNTWMHVGFVRVDNEKMSKSLNNFFTIREVLK 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
YHP +R+FL+S+HYRSPLNY++ LD A + +Y LQ E L
Sbjct: 284 DYHPEVIRYFLLSSHYRSPLNYTIENLDIAKTNLARLYTALQAAEPGL------------ 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ +F+ M DD NT + F+ L K+ K QQ L+
Sbjct: 332 --VAENT--DFEAKFNEAMDDDFNTPQAMAVLFE------------LVKEVNKTQQPGLV 375
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQ-LKDKALKRAELTEEDVLQLIEERAAARK 361
L+ + N LGLL +E Q K + + LT++ + LI ER AR
Sbjct: 376 ALLQSLANR-------LGLL-----TETPQSFFKSQVGQTDGLTDDAIEALIVERTQARA 423
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K++++SD+IR +L KG+ L+D + T WR
Sbjct: 424 DKNWARSDEIRDELLAKGVELLDGKEGTSWR 454
>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 470
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 222/393 (56%), Gaps = 26/393 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+A L T PRV++H+ I I +++ AY EGDV++ K YG+LS Q L
Sbjct: 101 IASLGVHKATLNPRVTEHIPSIIAFIQGLVDTGYAYASEGDVYYRTSKFEEYGKLSHQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ V RK NP DF LWK K GE +W+SPWGPGRPGWHIECSAM+ YL
Sbjct: 161 EELQFGIRIEVGERKENPQDFVLWKGVKPGEINWESPWGPGRPGWHIECSAMAREYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E+AQS A +YWMHNG++ NNEKMSKSLGN T+ ++
Sbjct: 221 LDIHGGGHDLQFPHHECEVAQSEALTGKQLANYWMHNGYIHINNEKMSKSLGNGITVNEL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+R P A+R+F++S HYRSPLN++ + A ++V I + + LS F + A
Sbjct: 281 VKRVKPAAIRYFILSTHYRSPLNFTDETIAQAENSVDRIANCAANLKHRLSTFDGQSEGA 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL- 299
D I +L+ +F A+M DD NT +T F+ + + + + + +
Sbjct: 341 AAGELG-DRIAQLKAQFEAKMGDDFNTPDAITAVFE----LVTEANQYMNRADASSEGIA 395
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L+ +L ++ +LGLLP +A AEL ++++ LI ER A
Sbjct: 396 ALLAALEQMNT-------VLGLLP-------------EAGTDAELLDDEIDALIVERTEA 435
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R K+++++D+IR LT KGIAL D + WR
Sbjct: 436 RAAKNWARADEIRNLLTEKGIALEDTPQGIRWR 468
>gi|345018555|ref|YP_004820908.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939598|ref|ZP_10305242.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
gi|344033898|gb|AEM79624.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291348|gb|EIV99791.1| cysteinyl-tRNA synthetase [Thermoanaerobacter siderophilus SR4]
Length = 466
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 221/386 (57%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H+E I + I +I+ AYVV G+V+F K +YG+LS + +E +AG R+
Sbjct: 108 TVHPKATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DF LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINEEKKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA + YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P L
Sbjct: 228 LVFPHHENEIAQSEAAYEQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYRSP+N+S+ ++ A+ A Y+ L + L K +N +
Sbjct: 288 RLFMLMAHYRSPINFSLDLMEQANSA----YERLLNAVANLKHLANVCKDGGLNEEEKKL 343
Query: 250 INKLRDEFHAR---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ K + M DD NT+ ++ F+ A K N++L+ K+ + L + L
Sbjct: 344 MEKFEEYKKEFEEAMDDDFNTADAISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLS 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ +LGL G EL +E++L LIEER ARK K++
Sbjct: 403 E----------VLGLSYRGV--------------ETELNDEEILALIEERQKARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L KGI L D + W+
Sbjct: 439 LADEIRDRLREKGIILEDTPEGVRWK 464
>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
Length = 464
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 221/390 (56%), Gaps = 42/390 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ I +I +++ AY+ + GDV + V +YG+LS + LE
Sbjct: 113 LNILPPDVEPRATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEG 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FD
Sbjct: 173 LMAGARVEIVKEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA + +YW+H G + NNEKMSKSLGNFFTI +
Sbjct: 233 IHGGGLDLQFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLA 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++HP +R+FL+S+HYRS LNYS L +A A+ +YQT++D S F G+
Sbjct: 293 KHHPEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKD-----SRFIADGELD-- 345
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
N +EF+ M+DD NT L+ FQ L + K L
Sbjct: 346 --------NHWINEFNQAMNDDFNTPVALSVMFQ------------LSHEVNKSNSPILA 385
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L+ + N + L L P ++ + +DKA + QLI ER AR
Sbjct: 386 ATLKYLGNTMG-----LLLTDPSSFLQSGLDDEDKA---------SIEQLINERLQARTE 431
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+++ ++DQIRADL +GI L D T WR
Sbjct: 432 RNWERADQIRADLLSRGIELEDGANGTTWR 461
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 239/394 (60%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q+++MI+ +++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCAAPDEAPKATEYIDQMQNMISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
++ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 DDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + +Q+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFK-------AYQQTYG 335
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ + + + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 336 QKTVDALDQSFVER----FNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L +LR++ N ILGL+ + + +AL L++ ++ I++R
Sbjct: 387 TVLYSTLRQLTN-------ILGLVQHDVDEFLKSDIGQEALT---LSDAEIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADSIRQSLLDQGVVLEDTRQGTIWR 470
>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
Length = 454
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 221/390 (56%), Gaps = 42/390 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ I +I +++ AY+ + GDV + V +YG+LS + LE
Sbjct: 103 LNILPPDVEPRATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV + KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FD
Sbjct: 163 LMAGARVEIVKEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA + +YW+H G + NNEKMSKSLGNFFTI +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++HP +R+FL+S+HYRS LNYS L +A A+ +YQT++D S F G+
Sbjct: 283 KHHPEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKD-----SRFIADGELD-- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
N +EF+ M+DD NT L+ FQ L + K L
Sbjct: 336 --------NHWINEFNQAMNDDFNTPVALSVMFQ------------LSHEVNKSNSPILA 375
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L+ + N + L L P ++ + +DKA + QLI ER AR
Sbjct: 376 ATLKYLGNTMG-----LLLTDPSSFLQSGLDDEDKA---------SIEQLINERLQARTE 421
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+++ ++DQIRADL +GI L D T WR
Sbjct: 422 RNWERADQIRADLLSRGIELEDGANGTTWR 451
>gi|421076448|ref|ZP_15537435.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392525459|gb|EIW48598.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 481
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 231/387 (59%), Gaps = 27/387 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P VSDHM +I +++ ++ AY+V+GDVF++VEK +YG+LSG+ +E+ +AG RV VD
Sbjct: 113 PTVSDHMTEIINIVEGLVAKGYAYIVDGDVFYSVEKFNDYGKLSGRDIEDMKAGARVDVD 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK +P DFALWK+AK GEP+W+SPWG GRPGWHIEC+AMS YL + FD HGGG DLIF
Sbjct: 173 ERKHHPMDFALWKSAKPGEPAWESPWGKGRPGWHIECTAMSLKYLGNSFDFHGGGSDLIF 232
Query: 133 PHHENEIAQSCAACQDSN--VSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS A ++ V YW+HNG +T N EKMSKSLGNFF ++ I E Y P LR
Sbjct: 233 PHHENEIAQSEAFVEEGQPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILEHYSPEVLR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE--D 248
F++S HYRSPL++S +L A ++ + L+ + ++ A N A E
Sbjct: 293 FFVLSTHYRSPLDFSDERLSEAQRSL----ERLRTAVENVLQLEKLPDAANENKADELVK 348
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML---KKKQPKQQQLSLIESL 305
+ ++F M DD NT+ ++ F A K IN N + K + + ++L ++
Sbjct: 349 VAKQAEEDFCKAMDDDFNTALAISVMFGLA-KEINVYYNGVIAGKVQHTTEGYIALRQTY 407
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ N I+G+ +Q+ K EL E+ + +IE R AR+NKD+
Sbjct: 408 FMMAN-------IIGIF--------VQEQTGKVDDSQELVEQLMDIIIEIRQHARQNKDW 452
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D++R L GI L D + W+
Sbjct: 453 TVADKVRDSLGAVGIILEDSPQGVRWK 479
>gi|390960204|ref|YP_006424038.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
gi|390518512|gb|AFL94244.1| cysteinyl-tRNA synthetase [Thermococcus sp. CL1]
Length = 451
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 220/392 (56%), Gaps = 20/392 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++HME I + + ++ AY V+F V K +YG+LS +L
Sbjct: 76 MRALKVKPADIYPRVTEHMEDIIEFVRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKL 135
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ G RV KRNP DFALWK AK GEP W SPWG GRPGWHIECS MS YL
Sbjct: 136 EDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWSSPWGEGRPGWHIECSTMSTKYLGES 195
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G + N EKMSKSLGNF TIR++
Sbjct: 196 FDIHGGGNDLIFPHHENEIAQSEACTGHEWVRYWLHTGFLMVNGEKMSKSLGNFVTIREM 255
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ERY P +R F++ HYRSPL+Y+ ++ A + + +Y TL++ VA+ + +
Sbjct: 256 LERYDPEVIRLFILQRHYRSPLDYTEEGMEHAKNNLERLYNTLENIRVAMERAEISFRWE 315
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ A + I +F+ M DD NT+ L F+ A +N L + + PK+ L
Sbjct: 316 KLEFEAYEAIRDAGRKFYEAMDDDFNTAEALKAVFE-ASNAVNRYLTEV--ETPKESVLR 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I +EV G + + ++ +RA EE + LI+ RA R
Sbjct: 373 KAWEFFRIVSEV-----------FGIFEDYFRE------QRAGEEEELIRLLIDVRAQLR 415
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K ++F+ +D+IR +L GI L D + T+W+
Sbjct: 416 KERNFALADRIRDELRNLGIQLEDTPQGTVWK 447
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 229/389 (58%), Gaps = 27/389 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR ++ M++I + +I+ AY V+GDV+F+ +K YG+LSGQ L++
Sbjct: 102 LNIKRATVNPRATEFMDEIISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ VD RK++P DFA+WK K GEPSW+SPWG GRPGWHIECS M+ L DI
Sbjct: 162 QAGARITVDERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS A +YWMH+ ++ NN+KMSKSL NFFT R+I ER
Sbjct: 222 HAGGADLVFPHHENEIAQSEARNGKDFANYWMHSAYLNINNKKMSKSLNNFFTTREILER 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++SAHYR+PLN+S L+SA + +Y ++ + E L + T +
Sbjct: 282 YDAEVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTG-VE 340
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+N ++++ +M DD NT+ + F D +K IN+ +N +
Sbjct: 341 KEYIKVLNSYKEKYIEKMDDDFNTADAIAVIF-DLIKEINTHVNT--------------D 385
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
S +++ N E++R LG +P G +LQ+ L ++ LIE+R ARK++
Sbjct: 386 SSKELVNYSLELIRELG-MPLG----ILQKSTIVDLN------AEIEGLIEQRQKARKDR 434
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
D++ +D+IR DL +GI L D + W+
Sbjct: 435 DWALADKIRDDLKARGIVLEDTAQGVRWK 463
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 222/384 (57%), Gaps = 8/384 (2%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
P +P+ ++H+ ++ +I ++I+ AY DV++ V+ P+YG+LS + +E+ +AG R
Sbjct: 109 PDIEPKATEHISEMIALIEELISKGKAYPSGNDVYYIVDSFPDYGKLSKRNVEDMQAGAR 168
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
++++ +KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAMS YL FDIHGGG
Sbjct: 169 ISINEQKRNPLDFVLWKGSKPGEPTWESPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQ 228
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS + + W+H+G VT +EKMSKSLGNF TIR I YHP
Sbjct: 229 DLIFPHHENEIAQSEGVHGKAFANLWIHHGFVTIRDEKMSKSLGNFLTIRDILTHYHPEV 288
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI-NPAAE 247
LR F+ S HYR+PL++S + A+ + +Y+ + + L P + A I
Sbjct: 289 LRFFIFSTHYRNPLDFSESAMQDATAGLERLYECVAAVD-RLDPQKSGANVASIFTDNDR 347
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + F M +D NT+ G F D +K IN L P S +E L+K
Sbjct: 348 QLLESMESRFQQAMDNDFNTAQA-QGIFFDTVKTINRICRAL----PAVPSASDVEFLKK 402
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
N ++++ I+G+L A S L K+K + L + LI ER R K++++
Sbjct: 403 CANNLRKLADIMGILREDAES-FLAAGKNKMISEGGLDVNAIEALIAERNQCRSAKNWAR 461
Query: 368 SDQIRADLTRKGIALMDMGKETIW 391
SD+IR L + I L D T W
Sbjct: 462 SDEIRDLLLAQNIELKDGPNGTTW 485
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23.1|SYC_DESAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 228/396 (57%), Gaps = 17/396 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ ++H+ ++ ++ +I D AY GDV+F V +YG+LSG+
Sbjct: 99 MDKLNILRADIEPKCTEHIPEMIELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ ++G R+ K++P DFALWKAAK GEPSW+SPWG GRPGWH+ECSAMS Y
Sbjct: 159 IEDLQSGARIQPGEEKQDPLDFALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFEL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS AA +W+HNG V N+EKMSKSLGNFFTIR
Sbjct: 219 PFDIHGGGQDLSFPHHENEIAQSEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHG 237
I +++ P LR+FL++ HYRSPL++S L+ A + +Y L+ AL S + +
Sbjct: 279 ILDKFMPETLRYFLLTMHYRSPLDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAA 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ ED D M DD+NT+ GA I + + ++K ++
Sbjct: 339 LPEEVLAEIEDAEKGWADA----MEDDMNTA----GAMGHMFTLIRLAGRIGEEKSWRKS 390
Query: 298 QLSLIESLRKIENEVK--EVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ +R +E+ K EVL I P E L++LK L+R + V +L+
Sbjct: 391 EGGRDAWIRILEDMKKWGEVLGIFTRDP----KEFLEELKLCMLERKGIEVAKVEELVAA 446
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R ARKNKDF++SD+IR +L G+ + D + +W
Sbjct: 447 RQEARKNKDFARSDEIRDELIELGVEVKDTPQGAVW 482
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 219/393 (55%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE
Sbjct: 105 LNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQ 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 165 LQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 225 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS +NYS L A A+ +Y ++D ++ ++
Sbjct: 285 HYDAETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVTA---------- 334
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F + +N LK Q +
Sbjct: 335 -APAEEFVAK----FKAAMDDDFNTPEAYSVLFD-----MVREINRLKTTDMAQASAMAV 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+K++ +LGL L Q D A + E ++++V + LI ER A
Sbjct: 385 --------AMKQLADVLGL---------LHQAPD-AFFKGEGSDDEVAEIEALIVERNRA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D T WR
Sbjct: 427 RAEKDWPAADVARNRLNELGVVLEDGPSGTTWR 459
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 227/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+E+I +++ +++ + AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMVRPDIEPRATQHIEEIIELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D VA + + + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +++
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
+L ++E+ +LG +LQQ + LK E EE ++ +LI ER AR
Sbjct: 377 AALGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSTGKTSWR 456
>gi|335424982|ref|ZP_08553974.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
gi|334886972|gb|EGM25316.1| cysteinyl-tRNA synthetase [Salinisphaera shabanensis E1L3A]
Length = 462
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 226/392 (57%), Gaps = 33/392 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L P+ +P + H++QI MI ++I N AY + GDV++ V NYG LSG+RL
Sbjct: 101 AALGLKAPSAEPTATGHVDQIIAMIERLIENGAAYASDNGDVYYDVSTFDNYGALSGRRL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAGER+AV+ K +P DF LWKAAK EPSWDSPWG GRPGWHIECSAMS H L +
Sbjct: 161 ADLRAGERIAVNEAKTDPLDFVLWKAAKPDEPSWDSPWGQGRPGWHIECSAMSTHCLGAS 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL FPHHENEIAQS AA V+ WMHNG VT ++EKMSKSLGNF TIR +
Sbjct: 221 FDIHGGGLDLQFPHHENEIAQSEAATGQRYVTTWMHNGFVTVDDEKMSKSLGNFLTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+Y ++R+F++S HYRSPL Y+V +D+A+ A+ +Y L+D ++P
Sbjct: 281 LAKYDAESVRYFVLSTHYRSPLAYNVDAMDAATSALSRLYTALRD----VAP-------- 328
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N A + + F M+DDLNT + F+ M + Q +Q
Sbjct: 329 --NDAQSEAADAYEARFTDAMADDLNTPAAIAVLFE-----------MARDCQRLKQDDC 375
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
++ I + + +GLL + Q L+ + + +++ER AR
Sbjct: 376 --QAAGAIAARLALLAGRIGLL-----EQSPQVFLQGHAGEEGLSADTIEAMLQERRDAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+F+++D+IR LT + I L D T+WR
Sbjct: 429 AAKNFARADEIRDALTAQNIVLEDGPDGTLWR 460
>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 468
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/383 (43%), Positives = 219/383 (57%), Gaps = 26/383 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+D+ME I + I ++I+ D AY GDVF+ K +YG+LS Q L+ + G R+
Sbjct: 110 TLNPRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK NP DF LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDKRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS A +YWMHNG++ NNEKMSKSLGN ++++ E+Y A+
Sbjct: 230 LQFPHHECEVAQSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKELREQYTKEAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+F++S HYR+PLNYS ++ A ++V + + E L K +++ D
Sbjct: 290 RYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGT-AIGSKDDQVSQDVADK 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
I+ + EFH +M DD NT +T FQ A S N L K+ L E LR
Sbjct: 349 ISAVLVEFHEKMQDDFNTPDAITAMFQWA-----SEANQL-LKEASIPAADLHEVLRAF- 401
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
NE+ VLRI+ EL +E++ LI ER ARKNK+++++D
Sbjct: 402 NEMNGVLRIVN------------------NGTDELLDEEIEALIAERVEARKNKNWARAD 443
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L +GI L D + WR
Sbjct: 444 EIRDKLADEGIVLEDTAQGMRWR 466
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 168/392 (42%), Positives = 222/392 (56%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+E+I +++ ++ + AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMVRPDIEPRATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D VA + + + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN +K + +L
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREINR-----QKAEDMVVAAALG 380
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
LR++ GA +LQQ + LK E EE ++ +LI ER AR
Sbjct: 381 ARLREL----------------GAVLGILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 219/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ ++
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F D ++ IN L + Q ++L
Sbjct: 333 -APAEEFVAK----FKAAMDDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL- 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
K++ +LGLL S+ + E+ E + LI ER AR
Sbjct: 385 ----------KQLADVLGLL-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L G+ L D T WR
Sbjct: 428 KDWAAADVARNRLNELGVELEDSPSGTTWR 457
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 219/399 (54%), Gaps = 54/399 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ ++
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F D ++ IN L + Q ++L
Sbjct: 333 -APAEEFVAK----FKAAMDDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL- 384
Query: 303 ESLRKIENEVKEVLRILGLLP---------PGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
K++ +LGLL G+Y EV + + LI
Sbjct: 385 ----------KQLADVLGLLSQEPEAFFQGGGSYDEVAE----------------IEALI 418
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ER AR KD++ +D R L G+ L D T WR
Sbjct: 419 VERNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWR 457
>gi|406897287|gb|EKD41287.1| hypothetical protein ACD_73C00777G0001 [uncultured bacterium]
Length = 482
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 223/384 (58%), Gaps = 19/384 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L PPT +P+ ++H+E++ +I + N AY GDVF+ V + +YG+LSG+++E
Sbjct: 104 LGLKPPTIEPKATEHIEEMLSLIGTLEKNGFAYPAGGDVFYKVRQKNDYGKLSGKKIEEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+G R+ + K +P DFALWK +K GEPSW S WG GRPGWHIECSAMS YL FDI
Sbjct: 164 ESGARIEILEAKTDPLDFALWKGSKPGEPSWASHWGEGRPGWHIECSAMSMKYLGETFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DL FPHHENEIAQS AA YW+HNG V N EKMSKSLGNF TIR++ E+
Sbjct: 224 HGGGRDLSFPHHENEIAQSEAATGKLFAKYWLHNGFVNINAEKMSKSLGNFLTIREMLEK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
YHP LR F+++A YRSPL+Y+ +++A ++ Y T + +E + +
Sbjct: 284 YHPEVLRLFILAAQYRSPLDYTEANINNARQSLIRWYTTTDRIQ------KECRHLEKTD 337
Query: 244 PAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A+D K L +EF M DD NT+ + TG D ++ N L+ K P+ +
Sbjct: 338 DGAKDLEKKVLGLMNEFQEAMDDDFNTAKV-TGILFDLVREWNRVLDT-KLAVPQ----A 391
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ E+ K + EVL + G P + L K + ++ ++ + I +R AR
Sbjct: 392 VCEAFFKNVARISEVLGLFGAKP----EDFLNDDKKLQFQSVKIDAAEIEKSIADRNMAR 447
Query: 361 KNKDFSKSDQIRADLTRKGIALMD 384
KNKD+ K+D IR +L G+ + D
Sbjct: 448 KNKDWVKADLIRKELKEHGVEIKD 471
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 229/386 (59%), Gaps = 32/386 (8%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
T PRV++++++I I +I+ AYV+ GDV+F V+K YG+LS + ++ +G R
Sbjct: 107 ATVHPRVTENIKEIIGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGAR 166
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
+ V+ +K++P DFALWK K GE WDSPWG GRPGWHIECS MS YL + DIH GG
Sbjct: 167 IDVNEQKKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQ 226
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS + +YWMHNG++ +N KMSKSLGNFFT+R + + Y
Sbjct: 227 DLIFPHHENEIAQSECKNGCTFANYWMHNGYINIDNVKMSKSLGNFFTVRDVLKVYDGDV 286
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR F++++HYRSP+NYS LDSA ++ +++C+ +L + + ++ +D
Sbjct: 287 LRFFMLTSHYRSPINYSKDLLDSAKSSL----DRIKNCKSSLDFSLQKSQDKEVSQEEKD 342
Query: 249 C---INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
+ ++ F +M+DDLNT+ +T F D +K N+S+N K Q LS++
Sbjct: 343 ILENVQAIKSTFIEKMNDDLNTADAITAIF-DLVKLANTSVNENSSKTFVQSILSML--- 398
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
NE+ VL I A +E K E + +LIE R A+K+KDF
Sbjct: 399 ----NELTAVLNI-------ANNE----------KAEEQDTSKIEELIELRNQAKKSKDF 437
Query: 366 SKSDQIRADLTRKGIALMDMGKETIW 391
+K+D+IR +L + GI + D + T W
Sbjct: 438 AKADEIREELRKMGIEIKDTRQGTQW 463
>gi|388456175|ref|ZP_10138470.1| cysteinyl-tRNA ligase [Fluoribacter dumoffii Tex-KL]
Length = 454
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 228/393 (58%), Gaps = 48/393 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR ++H+E I +I +++ AY+ + GDV + V+ +YG+LS + LE
Sbjct: 103 LNILPPDVEPRATEHIESIIRLIERLLEKGNAYLSDNGDVCYQVDSFADYGKLSHKDLEG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV V KR+P DF LWK AK GEPSW SPWG GRPGWHIECSAM+ L +FD
Sbjct: 163 LVAGARVEVVKEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMGELGEQFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS AA + +YW+H G + NNEKMSKSLGNF+TI +
Sbjct: 223 IHGGGLDLQFPHHENEIAQSEAATEKPFANYWLHVGMLQVNNEKMSKSLGNFYTIADVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++HP +R+FL+S+HYRS LNYS L ++ A+ +YQ L+D +V
Sbjct: 283 KHHPEVVRYFLLSSHYRSSLNYSEENLLNSRKALARLYQALKDSQVI------------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P E N EF+ M+DD NT L+ FQ + + IN S +++
Sbjct: 330 -PDGE-MDNHWISEFNQAMNDDFNTPVALSVLFQLSHE-INKSRSVI------------- 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED---VLQLIEERAAA 359
+ N +K + I+G+L Q + ++ EED + +LI ER A
Sbjct: 374 -----LANTLKYLAGIMGIL----------QEDPASFLQSGFAEEDKTEIEELIAERLQA 418
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++ ++DQIRADL ++GI L D T WR
Sbjct: 419 RADKNWGRADQIRADLLKRGIELEDGPNGTTWR 451
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 226/393 (57%), Gaps = 35/393 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR ++H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ
Sbjct: 100 FAKLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQD 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ RAG R+ V+ KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ HYL +
Sbjct: 160 ITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGT 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS +A V+YW+H G VT N EKMSKSL +FFT+R
Sbjct: 220 HFDIHGGGSDLIFPHHENEIAQSTSANDGPYVNYWLHTGMVTVNKEKMSKSLNSFFTLRD 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I R+ ++R FL+SAHYR PLNYS + A ++ +Y Q + + S ++H
Sbjct: 280 ILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--- 334
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ R F M DD NT L F+ + +N L +
Sbjct: 335 -----------DAWRARFCGAMDDDFNTPQALAILFE-----LTREINRLCGTN-DDEAA 377
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L +L+ + N +LGLL A L+ D L AEL + + +LI +R+ A
Sbjct: 378 ALATTLKDLGN-------VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEA 425
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 426 RRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 458
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 219/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ ++
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ I K F A M DD NT + F D ++ IN L + Q ++L
Sbjct: 333 -APAEEFIAK----FKAAMDDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL- 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
K++ +LGLL S+ + E+ E + LI ER AR
Sbjct: 385 ----------KQLADVLGLL-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L G+ L D T WR
Sbjct: 428 KDWAAADVARNRLNELGVELEDGPSGTTWR 457
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1.1|SYC_DESAP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/386 (43%), Positives = 222/386 (57%), Gaps = 24/386 (6%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P+VSDH+ +I +IT II+ AYV GDV+FAV K YGRLS + L++ AG RV V
Sbjct: 110 HPKVSDHIPEIIALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEV 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+KR+P DFALWKAAK GEP W+SPWG GRPGWHIECSAM+ YL + FDIHGGG DLI
Sbjct: 170 GEQKRDPLDFALWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS A + YW+HNG +T EKMSKSLGN F +R++T Y P ALR
Sbjct: 230 FPHHENEIAQSEGATGEPFARYWIHNGFITIREEKMSKSLGNVFLVRELTRLYPPEALRL 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL---SPFQEHGKTARINPAAED 248
FL+S HYR+PL+Y ++++ AV + L +L +P + G R+ E
Sbjct: 290 FLLSNHYRNPLDYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRL----EA 345
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL--NMLKKKQPKQQQLSLIESLR 306
+ L+ F A M DD NT+ + D +N+ L N + Q+ L L ++
Sbjct: 346 VLEVLQGRFEAAMDDDFNTA-LAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN 404
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
R+LG+ P VL+ +L++ + LI R AR+NKDF+
Sbjct: 405 ----------RVLGIFPEHKGRIVLE----AGAVSGDLSQGLLDLLIALRQDARRNKDFA 450
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L GI L D + W+
Sbjct: 451 TADRIRDGLRALGILLEDTPQGVRWK 476
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 220/395 (55%), Gaps = 53/395 (13%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ +++ + AYV + GDV F+++ P YGRLSGQ +E +AG
Sbjct: 108 PDIEPRATQHIGEIITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KRNP DF LWK +K GEP WDSPWG GRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVDVEESKRNPMDFVLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHHTPYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKVYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE-----VALS-PFQEHGKTAR 241
+R+FL+S HYRSPLNYS L L A ++ +Y L+ E ALS PF E
Sbjct: 288 TVRYFLMSGHYRSPLNYSDLNLQQARASLERLYTALRGVEDGEEQAALSAPFDE------ 341
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
F A M DD NT + F + LN K+ P ++L
Sbjct: 342 --------------RFKAAMDDDFNTPEAYSVLFD-----LARDLNRAKQDSPA-DAVAL 381
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERA 357
LR++ +LGL LQQ ++ L+ E D + LI+ R
Sbjct: 382 AACLRRLGG-------VLGL---------LQQQPEQFLQSGAAAETDDVAEIELLIKTRN 425
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +K+++ +D+ R LT GI L D + T WR
Sbjct: 426 DARASKNWALADEARNKLTEMGIVLEDGPQGTTWR 460
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 236/394 (59%), Gaps = 29/394 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A+L C P P+ +++++Q++ MI +++ AY GDV+F V K YGRLSG++L
Sbjct: 103 ANLGCAAPDEAPKATEYIDQMQSMINTLVDKGAAYPSSNGDVYFEVSKFDKYGRLSGRKL 162
Query: 61 ENNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
E+ +AG ERV V+ K++P DF LWK AK EP+W SPWG GRPGWHIECSAMS L
Sbjct: 163 EDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLG 222
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 223 NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIR 282
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ E++HP +R+F++S+HYRSP+N+S + L A A+ Y + + + Q +G+
Sbjct: 283 DVMEKFHPEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQ------QVYGQ 336
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
E + F+ M DD NT+ + F+ +N LN K++ +Q
Sbjct: 337 -----KTIETLEQNFVERFNNAMCDDFNTAEAMAVLFE-----LNKELNRAVKEEQAEQA 386
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+L +LR + + ILGL+ + + +AL L++ D+ I++R
Sbjct: 387 TALYSTLRHLTH-------ILGLVQHDVDEFLKSDIGQEALS---LSDADIEDFIQQRVD 436
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+K KDF+K+D IR L +G+ L D + TIWR
Sbjct: 437 AKKAKDFAKADGIRQSLLDQGVVLEDTRQGTIWR 470
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 221/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + H+ +I DM+ +++ AYV +GDV F+V P YGRLSGQ LE +AG
Sbjct: 108 PDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLSHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS +NYS L A A+ +Y ++D ++ ++ AE
Sbjct: 288 TVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAA-----------APAE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + K F A M DD NT + F D ++ IN + +L+ +
Sbjct: 337 EFVAK----FKAAMDDDFNTPEAYSVLF-DMVREIN------------RLKLTDMAEASA 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
+ +K++ +LGL L Q D A + E ++++V + LI ER AR KD
Sbjct: 380 LAVSMKQLADVLGL---------LHQSPD-AFFKGEGSDDEVAEIEALIVERNRARTEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L G+ L D T WR
Sbjct: 430 WPAADVARNRLNELGVVLEDGPSGTTWR 457
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 220/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + HM +I DM+ ++I D AYV GDV F+V P YGRLSGQ +E +AG
Sbjct: 108 PDFEPRATLHMPEIIDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+WDSPWG GRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A S V+YWMH G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTSYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLNHYDAG 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y +L+ ++++ + A
Sbjct: 288 TIRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVE-----------SADAS 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + K F A M DD NT + F+ + +N +K S I +
Sbjct: 337 EFVAK----FKAAMDDDFNTPEAYSVLFE-----MVREINRVKG--------SDIAAASA 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
+ ++KE+ +LGL L+Q D K E ++++V Q LI ER AR KD
Sbjct: 380 LGVKLKELAEVLGL---------LEQDVDTFFK-GEGSDDEVAQIEALIVERNRARAEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L G+ L D T WR
Sbjct: 430 WPAADIARDGLNALGVILEDGPSGTTWR 457
>gi|374263848|ref|ZP_09622394.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
gi|363535691|gb|EHL29139.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
Length = 412
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 227/393 (57%), Gaps = 42/393 (10%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
M L LPP Y+PR ++H+ I +I +++ AYV + GDV + V+ YG+LS +
Sbjct: 57 MRALNILPPNYEPRATEHIATIIRLIERLLARGNAYVSDNGDVCYQVDSFAEYGKLSHKD 116
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE +G RV V KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ L
Sbjct: 117 LEGLMSGARVEVVKEKRSPLDFVLWKKAKPGEPYWASPWGNGRPGWHIECSAMAIEELGE 176
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG+DL FPHHENEIAQS AA +YW+H G + NNEKMSKSLGNFFTI
Sbjct: 177 HFDIHGGGLDLQFPHHENEIAQSEAATHKPFANYWLHVGMLQVNNEKMSKSLGNFFTIAD 236
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ ++HP +R+FL+S+HYRS LNYS L +A A+ +YQT++D SP +G
Sbjct: 237 VLAKHHPEVVRYFLLSSHYRSSLNYSEENLFNAKKALTRLYQTMKD-----SPVTVNG-- 289
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ N +EF+ M+DD N+ L+ FQ ++ +N K P
Sbjct: 290 --------ELDNHWINEFNKAMNDDFNSPVALSVLFQ-----LSHEVN--KNGTP----- 329
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ +K + ++GLL + +E LQ D+ K A + QLI ER A
Sbjct: 330 -------VLATTLKHLAGLMGLLQSDS-AEFLQAGFDEDDKAA------IEQLIAERLQA 375
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ++++ ++DQIRA+L +GI L D K T WR
Sbjct: 376 RADRNWERADQIRAELLNQGIELEDGAKGTTWR 408
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 219/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I DM+ ++ AYV +GDV F+V P+YGRLSGQ L+
Sbjct: 103 LNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD K+NP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FD
Sbjct: 163 LQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y ++D ++ ++
Sbjct: 283 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ + K F A M DD NT + F D ++ IN L + Q ++L
Sbjct: 333 -APAEEFVAK----FKAAMDDDFNTPEAYSVLF-DMVREIN-RLKLTDMAQASALAVTL- 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
K++ +LGLL S+ + E+ E + LI ER AR
Sbjct: 385 ----------KQLADVLGLL-----SQEPEAFFQGGGSDDEVAE--IEALIVERNRARTE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L G+ L D T WR
Sbjct: 428 KDWAAADVARNRLNELGVELEDGPSGTTWR 457
>gi|410658554|ref|YP_006910925.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|410661541|ref|YP_006913912.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
gi|409020909|gb|AFV02940.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. DCA]
gi|409023897|gb|AFV05927.1| Cysteinyl-tRNA synthetase [Dehalobacter sp. CF]
Length = 487
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 231/400 (57%), Gaps = 31/400 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LP P+ ++H+ ++ D+I ++ AY ++GDV+FAV+K P YG+LSG+ LE+
Sbjct: 104 LNILPADIHPKATEHIPEMIDIIRRLEEKGLAYNIDGDVYFAVDKFPGYGKLSGRTLEDM 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD +K NP DFALWK AKAGEP W+SPWG GRPGWHIECSAMS YL FDI
Sbjct: 164 QAGARVEVDDKKHNPMDFALWKKAKAGEPFWESPWGKGRPGWHIECSAMSLKYLGPGFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQS + + YWMHN +T N EKMSKSLGNFF +R +T
Sbjct: 224 HGGGGDLVFPHHENEIAQSEGCLEGQQFARYWMHNAFITINQEKMSKSLGNFFLVRDVTG 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTAR 241
++ +R +L+ HYRSPL++ +L AS + + +++ + AL Q + G T
Sbjct: 284 KFPGDVIRFYLLGTHYRSPLDFDDEKLVMASKGLDRLKNSVRLAKEALGKAQGKEGMTFG 343
Query: 242 I----------NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
I N A+ C+ + R+ F M DD N++ F+ A K IN+ L
Sbjct: 344 IIAVNRDLKTDNEMAQACL-EARNAFEQAMDDDFNSAQAYAALFELA-KGINTYL----- 396
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
+ ESL + + E+ ILG A +E+LQ+ K + EL
Sbjct: 397 ----AKGSIETESLTEAAQTLIELAGILG-FDLEAEAEMLQEDSGKLAQVMEL------- 444
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
++E RA AR+NKD++ +D IR + GI + D + W
Sbjct: 445 VMEIRANARRNKDWTTADLIRDRIKEIGIVIEDTPEGARW 484
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 233/395 (58%), Gaps = 39/395 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR ++ M++I + +I+ AY V+GDV+F+ +K YG+LSGQ LE+
Sbjct: 108 LNIKRATVNPRATEFMDEIVAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDL 167
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ VD RK++P DFA+WK K GEPSW+SPWG GRPGWHIECS M+ L DI
Sbjct: 168 QAGARITVDERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDI 227
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS A + +YWMH+ ++ NN+KMSKSL NFFT R+I ER
Sbjct: 228 HAGGADLVFPHHENEIAQSEARNGKAFANYWMHSAYLNINNKKMSKSLNNFFTTREILER 287
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++SAHYR+PLN+S L+SA + +Y ++ + E L +I
Sbjct: 288 YDAEVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDE-------VKIE 340
Query: 244 PAAED------CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
ED +N ++++ +M DD NT+ + F D +K IN+ +N
Sbjct: 341 KMTEDEKEYTKVLNSYKEKYIEKMDDDFNTADAIAVIF-DLIKEINTHVNA--------- 390
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+S +++ N E++R LG +P G +LQ K L +L E + LIE+R
Sbjct: 391 -----DSSKELVNYSLEIIRELG-MPLG----ILQ--KSTML---DLNAE-IEGLIEQRQ 434
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK+++++ +D+IR DL +GI L D + W+
Sbjct: 435 QARKDRNWALADKIRDDLKARGIVLEDTPQGVRWK 469
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 217/390 (55%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L PTY+PR +D++E + MI +I D AY GDV++AV P+YG+LSG+ L +
Sbjct: 103 LGVSSPTYEPRATDYVENMIGMIGTLIEKDLAYRASNGDVYYAVHNFPSYGQLSGKSLND 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV +DS K++P DF LWK+AK GEP W+SPWG GRPGWHIECSAMS L FD
Sbjct: 163 LRAGERVEIDSNKKDPLDFVLWKSAKPGEPFWESPWGRGRPGWHIECSAMSEQLLGVHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A V+YWMHNG V +NEKMSKSLGNFFT+R+I +
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R F++ A YRSPLNYS L A+ +Y L++ + I
Sbjct: 283 HYQPEVVRFFILRAQYRSPLNYSDQHLKDTKLALDRLYIALKEVK-------------PI 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ A D N F M DD NT + F+ A S +N K+ L
Sbjct: 330 DMPAIDWNNLHAQRFKTAMEDDFNTPEAIAVLFELA-----SDVNKTGSKENAGLLKGLG 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L ++ +E L+ + L L A++R LI++R +ARK
Sbjct: 385 NLLGLLQQNPQEYLQ------NKVVTSELNSLPQDAIER----------LIQQRISARKE 428
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+S +D IR +L +GI L D + T WR
Sbjct: 429 GRYSDADAIRKNLLEQGIILEDNPQGTTWR 458
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/386 (43%), Positives = 232/386 (60%), Gaps = 25/386 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM+ I MI +IN + AYV++ DV+++VEK YG+LSG+ L++ AG R+ V+
Sbjct: 114 PRVSEHMDAIFTMIQTLINKNIAYVLDNDVYYSVEKFDGYGKLSGRCLDDMMAGARIEVN 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+K++P DFALWK AK GEP+WDSPWG GRPGWHIECSAMS YL + FD HGGG DLIF
Sbjct: 174 DKKKHPMDFALWKGAKPGEPAWDSPWGKGRPGWHIECSAMSHQYLGNSFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAAC--QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS AC + V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R
Sbjct: 234 PHHENEIAQS-EACFGHEPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYKPDAVR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
FLIS HYRSPL++S +L + ++ + ++ + +AL K+A + +D
Sbjct: 293 FFLISNHYRSPLDFSDARLKEMTRSLDRVRTSIVNV-LALLNMPTGSKSAEADNLLQDA- 350
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
++ ++F M DD NT+ G F+ A K +N+ Q QQ ++S +
Sbjct: 351 KQIMEDFETAMCDDFNTALASAGIFELAKK-----VNIY--HQAVAQQKVAVDS--SVVT 401
Query: 311 EVKEVLR----ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
EVK + R ILG+L A+ E Q K + A L E +++ R R NK +
Sbjct: 402 EVKRIFRTMTDILGILED-AWQE--QSDDVKQTEYAALVE----TILDIRNECRANKQYE 454
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D IR LT GI + D + W+
Sbjct: 455 LADSIRNKLTELGIIIEDSPQGVRWK 480
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus glucosetrophus SIP3-4]
Length = 456
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/395 (42%), Positives = 223/395 (56%), Gaps = 45/395 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++H+ + DMI +I AY + GDVF++V YG+LSG+ L
Sbjct: 101 ARLGVMRPDLEPKATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV +D KR+P DF LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L
Sbjct: 161 EDLRAGERVEIDQYKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHG 237
E+Y +R F++ A YRSPLNYS LD A A+ +Y L+ +AL F +
Sbjct: 281 LEKYDAEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQP 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ AR F A M DD NTS F+ + S +N
Sbjct: 339 QAAR---------------FKAAMDDDFNTSEAFAVLFE-----LASEVNRTASLADAAL 378
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+L L ++ + E Q + A R + +++ Q I+ R
Sbjct: 379 LKALAGLLGLLQRD----------------PETFLQGGESAQGR---SADEIEQFIQLRL 419
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR++K+F+++D+IR L +GI L D + T WR
Sbjct: 420 QARQSKNFAEADRIRKQLADEGILLEDSPQGTSWR 454
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 229/389 (58%), Gaps = 33/389 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+E I MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIEDIITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
+FL+S HYRSPL++S +L+ A+ ++L+ A+ + P A D
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGACDEA 342
Query: 251 NKL-------RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+L +EF A MSDD NT+ + F A +N+ + ++ + E
Sbjct: 343 QRLLEKAKEYEEEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQE 397
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
++ +++ K + ++G+L + + A EE + ++ R A R+ K
Sbjct: 398 AIAEVKRIFKFMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQK 449
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI + D + W+
Sbjct: 450 QWALADCIRDRLAEIGITIEDSPQGARWK 478
>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 466
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 220/386 (56%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H+E I + I +I+ AYVV G+V+F K +YG+LS + +E +AG R+
Sbjct: 108 TVHPKATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DF LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINEEKKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS A + YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P L
Sbjct: 228 LVFPHHENEIAQSETAYEQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYRSP+N+S+ ++ A+ A Y+ L + L K +N +
Sbjct: 288 RLFMLMAHYRSPINFSLDLMEQANSA----YERLLNAVANLKHLANVCKDGGLNEEEKKL 343
Query: 250 INKLRDEFHAR---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ K + M DD NT+ ++ F+ A K N++L+ K+ + L + L
Sbjct: 344 MEKFEEYKKEFEEAMDDDFNTADAISVLFEMA-KTSNANLSRNSSKKLVEYILDMFLKLS 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ +LGL G EL +E++L LIEER ARK K++
Sbjct: 403 E----------VLGLSYRGV--------------ETELNDEEILALIEERQKARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L KGI L D + W+
Sbjct: 439 LADEIRDRLREKGIILEDTPEGVRWK 464
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45.1|SYC_PYRKO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 216/394 (54%), Gaps = 24/394 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H++ I D I ++ AY V+F V K +YG+LS +L
Sbjct: 101 MKALKVKPADIYPRVTEHIQDIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS YL
Sbjct: 161 EDLVKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YWMH G + N EKMSKSLGNF TIR+
Sbjct: 221 FDIHGGGSDLIFPHHENEIAQTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFVTIREA 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
ERY P +R F++ HYRSPL+Y+ L+ A + + +Y TL++ VA+ + K
Sbjct: 281 LERYDPEVIRLFVLQRHYRSPLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWG 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A + I R +F+ M DD NT+ L F+ + IN L ++K PK+
Sbjct: 341 EEEFEAYEAIRDGRKKFYDAMDDDFNTAEALKAVFEVS-NAINRYLTQVEK--PKES--- 394
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAA 358
LRK K V + G+ + + + EE+ L LI+ RA
Sbjct: 395 ---ILRKAWEFFKMVSEVFGIF-------------EDYFREQKAGEEEALIKLLIDVRAQ 438
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK + F +D+IR +L GI L D + T+W+
Sbjct: 439 LRKERKFDLADKIRDELRNLGIQLEDTPQGTVWK 472
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 222/393 (56%), Gaps = 43/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I+N AYV +GDV F VE YG LS Q LE
Sbjct: 103 LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YS+ LD A A+ +Y L+ C+V+ EH A
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEA-- 340
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSL 301
F M DD NT L F+ I LN LK + K L++
Sbjct: 341 --------------FKTAMDDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV 381
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
+KE+ +LGL L+Q D LK +E ++ LI++R A
Sbjct: 382 ---------RLKELAGVLGL---------LEQDPDAFLKGDANDDETAEIEALIKQRNEA 423
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ K+++ +D++R L I L D TIWR
Sbjct: 424 KAAKNWAVADEVRDKLKAINIVLEDTPNGTIWR 456
>gi|409095424|ref|ZP_11215448.1| cysteinyl-tRNA ligase [Thermococcus zilligii AN1]
Length = 476
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 218/392 (55%), Gaps = 20/392 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L+ P PRV++H+ I + I ++ AY V+F V + +YG+LSG ++
Sbjct: 101 MAALKVKPADIYPRVTEHVADIIEFIRKLQEKGYAYEGSDGVYFEVRRFKDYGKLSGIKV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ G RV K+NP DF LWK AK GEP W SPWG GRPGWHIECS MS YL
Sbjct: 161 EDLVKGARVEPGEGKKNPEDFVLWKKAKPGEPKWSSPWGEGRPGWHIECSTMSTKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YWMH G + N EKMSKSLGNF TIR+
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQTEACTGHEWVRYWMHTGFLMVNGEKMSKSLGNFITIREA 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+Y+ ++ A + + +Y TL++ VA+ + +
Sbjct: 281 LKRYDPEVIRLFVLQKHYRSPLDYTEEGMEHAKNNLEKLYNTLENIRVAMERAEISFRWE 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ A + I + R +F+ M DD NT+ L F+ A +N L + + PK+ L
Sbjct: 341 KHEFEAYEAIREARKKFYEAMDDDFNTAEALKAVFE-ASNAVNRYLTQV--ETPKESILR 397
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
K+ EV G + + ++ ++A EE + L+E RA R
Sbjct: 398 KAWEFFKVVGEV-----------FGIFEDYFKE------QKAGEEEELIKLLVEVRAQLR 440
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K+F+ +D+IR L GI L D + T+W+
Sbjct: 441 KEKNFALADKIRTQLRELGIQLEDTPQGTVWK 472
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 223/393 (56%), Gaps = 40/393 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEAV-------- 333
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
E + + F A M DD NT L F+ I +N LK +
Sbjct: 334 ---GGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTED-------- 373
Query: 302 IESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ + +KE+ +LGLL P A+ LQ D E+ E + LI++R A
Sbjct: 374 VAKANGLAVRLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ K+++ +D++R L I L D T WR
Sbjct: 425 KAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 224/396 (56%), Gaps = 46/396 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR + + + MI ++I AY GDV++AV + YG+LSG+ L
Sbjct: 101 AALGVQKPNFEPRATQFVPDMISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VD KR+P DF LWKAAK GEP+W SPWG GRPGWHIECSAM+ HY
Sbjct: 161 DDLRAGERVDVDPNKRDPMDFVLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YWMHNG + +NEKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSEGAHDCKFVNYWMHNGFIRVDNEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R F++ AHYRSPLNYS L+ A A+ +Y L++
Sbjct: 281 LEKYDAEVVRFFILRAHYRSPLNYSDAHLEDARSALSRLYTALKNV-------------- 326
Query: 241 RINPAAEDCI----NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
PAA+ + N F A M DD NT + F+ L + K
Sbjct: 327 ---PAADVALDWEANDYARRFRAAMDDDFNTVEAVAVLFE------------LAGEANKS 371
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ L L+ + +LGLL + + L+ +L+ E++ ++V QLI R
Sbjct: 372 RSAELAGWLKTLGG-------VLGLLQ----RDPVDFLQGGSLE-GEISADEVEQLIAAR 419
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR KD+++SD+IR +L +GI L D T WR
Sbjct: 420 KAARAGKDWAESDRIRDELIARGIVLEDGAGGTTWR 455
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/395 (42%), Positives = 223/395 (56%), Gaps = 45/395 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++H+ + DMI +I AY + GDVF++V YG+LSG+ L
Sbjct: 115 ARLGVMRPDLEPKATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSL 174
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERV +D KR+P DF LWKAAK GEPSWDSPWG GRPGWHIECSAM A +L
Sbjct: 175 EDLRAGERVEIDQYKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPH 234
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+YWMHNG + ++EKMSKSLGNFFTIRQ+
Sbjct: 235 FDIHGGGQDLQFPHHENEIAQSEAANGCTFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQV 294
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ---EHG 237
E+Y +R F++ A YRSPLNYS LD A A+ +Y L+ +AL F +
Sbjct: 295 LEKYDAEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRG--LALPTFTIDWQQP 352
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ AR F A M DD NTS F+ + S +N
Sbjct: 353 QAAR---------------FKAAMDDDFNTSEAFAVLFE-----LASEVNRTASLADAAL 392
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+L L ++ + E Q + A R + +++ Q I+ R
Sbjct: 393 LKALAGLLGLLQRD----------------PETFLQGGESAQGR---SADEIEQFIQLRL 433
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR++K+F+++D+IR L +GI L D + T WR
Sbjct: 434 QARQSKNFAEADRIRKQLADEGILLEDSPQGTSWR 468
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 225/394 (57%), Gaps = 42/394 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +KE+ +LGLL P A+ LQ D E+ E + LI++R
Sbjct: 382 V---------RLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNE 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ K+++ +D++R L I L D T WR
Sbjct: 424 AKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/394 (42%), Positives = 225/394 (57%), Gaps = 42/394 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +KE+ +LGLL P A+ LQ D E+ E + LI++R
Sbjct: 382 V---------RLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNE 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ K+++ +D++R L I L D T WR
Sbjct: 424 AKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 225/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+E+I +++ ++ + AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMVRPDIEPRATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D A + + + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +++
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
+L ++E+ +LG +LQQ + LK E EE ++ +LI ER AR
Sbjct: 377 AALGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 223/393 (56%), Gaps = 40/393 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
E + + F A M DD NT L F+ I +N LK + +
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKAN--- 378
Query: 302 IESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ +KE+ +LGLL P A+ LQ D E+ E + LI++R A
Sbjct: 379 -----GLAARLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ K+++ +D++R L I L D T WR
Sbjct: 425 KAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|377555852|ref|ZP_09785580.1| cysteinyl-tRNA synthetase [endosymbiont of Bathymodiolus sp.]
Length = 434
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 227/404 (56%), Gaps = 52/404 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +D ++Q+ MI +I AY + GDV+++V K NYG+LSG+ L+
Sbjct: 66 LGILPPDIEPRATDAIDQMFYMIESLIEKGIAYQGKNGDVYYSVRKFKNYGKLSGKNLDE 125
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV +++ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS +L FD
Sbjct: 126 LEAGARVNIETSKQDPLDFVLWKMAKPNEPSWQSPWGDGRPGWHIECSAMSCTHLGKHFD 185
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V NNEKMSKSL NFFTIR + E
Sbjct: 186 IHGGGMDLAFPHHENEIAQSEGANDCTFVNTWMHVGFVNINNEKMSKSLNNFFTIRGVLE 245
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y LR+F++S+HYRSPLN+S LD+A ++ +Y + + + +E +
Sbjct: 246 NYDGETLRYFIMSSHYRSPLNFSDENLDNAKASLTRLYTATRGLSASAAATEEVSQ---- 301
Query: 243 NPAAEDCINKLRDEFHARMS----DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R ++ AR++ DD NT L+ F+ A K +N+ K+K+ Q
Sbjct: 302 -----------RFDYEARLTAALDDDFNTPIALSILFELA-KVVNA-----KRKKDSDQA 344
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE----------LTEED 348
+L + L+K+ G Y +LQ D LK L++
Sbjct: 345 NALGQLLKKL----------------GGYIGILQMEGDVFLKHTSQGSTEKRGVGLSDTQ 388
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ I++R AR NK+F+ SDQIR +L GI L D T WR
Sbjct: 389 IDAKIDKRNQARNNKNFNLSDQIRDELAELGIILEDNADATTWR 432
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35.1|SYC_HELMI RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 232/398 (58%), Gaps = 31/398 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T P+VS HM +I MI ++ AY + GDV+F++ +YG+LSG+ LE+
Sbjct: 104 LNVRPATIHPKVSAHMAEIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV V+ RKR+P DFALWK AK GEPSWDSPWG GRPGWHIECSAMS YL FDI
Sbjct: 164 QAGARVDVNERKRHPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DLIFPHHENEIAQS A S ++ YW+HNG +T N EKMSKSLGNFFT+R+I +
Sbjct: 224 HGGGQDLIFPHHENEIAQSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREILK 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
R+ +R +L+S HYRSP+++ +L++A + + + + E AL+ GK
Sbjct: 284 RFPGDVIRFYLLSTHYRSPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAA---SGKEGAE 340
Query: 243 NPAAEDCINKLRDE-------FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
PA + KL ++ F M DD NT+ L+ F D + N+ L+ P+
Sbjct: 341 RPAGQR--EKLEEQWLAAKKGFREAMDDDFNTALALSMLF-DLAREANTFLHGGFALTPE 397
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIE 354
+QL L ++ +E+ +LG+ L A + T + ++ LI
Sbjct: 398 DRQLLL-----QVAETFEELAGVLGI-----------DLAGGAAAADDNTVDGLMNLLIG 441
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RA ARK KD++ +D+IR L GI + D + W+
Sbjct: 442 IRAEARKKKDWATADRIRDGLKELGIVIEDTPQGARWK 479
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 218/390 (55%), Gaps = 46/390 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I DM+ ++I D AYV GDV F+V P YGRLSGQ LE +AG
Sbjct: 108 PDNEPRATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FDIHGGG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLAHYDAA 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPA 245
+R+FL+S HYRS LNYS L A A+ IY L+D ++++ +P QE
Sbjct: 288 TVRYFLLSGHYRSQLNYSEDNLKQAKAALERIYTALKDLDLSVEAAPAQE---------- 337
Query: 246 AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
+F M DD NT + F D ++ IN + K ++ +L
Sbjct: 338 -------FVAKFKTAMDDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKASAL 380
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKN 362
E+ +VL ILG Q D K E ++++V + LI ER AR
Sbjct: 381 GVALKELADVLGILG------------QDVDTFFK-GEGSDDEVAEIEALIVERNRARAE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ +D R L G+ L D + T WR
Sbjct: 428 KDWPAADVARDGLNALGVILEDGPEGTTWR 457
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 226/398 (56%), Gaps = 32/398 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++HM++I + + ++ AY V+F V K +YG+LS +L
Sbjct: 101 MKALKVKPADVYPRVTEHMDEIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ G RV KRNP DFALWK AK GEP W+SPWG GRPGWHIECS MS+ YL
Sbjct: 161 EDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YWMH G + N EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVHYWMHTGFLMVNGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS----PFQEH 236
+RY P +R F++ HYRSPL+YS ++ A + + +Y TL++ VA+ F+
Sbjct: 281 LKRYDPEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWD 340
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQP 294
R+ A D R +F+ M DD NT+ L F+ +++++N + + + P
Sbjct: 341 EPEFRVYEAIRDA----RRKFYEAMDDDFNTAEALKAVFE-----VSNAINRYLTEVETP 391
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
K+ LRK ++V + GL + + ++ +RA E + LIE
Sbjct: 392 KES------ILRKAWEFFRDVGEVFGL-----FEDYFKE------QRAGNEEALIDLLIE 434
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RA RK + F +D+IR +L + GI L D + T+W+
Sbjct: 435 VRAQLRKERKFDLADRIRDELRKLGIQLEDTPQGTVWK 472
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 171/399 (42%), Positives = 223/399 (55%), Gaps = 51/399 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV GDV F V+ PNYG LS Q LE
Sbjct: 103 LNILRPDSEPRATRHIGEIIELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ G
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARSALERMYTALR------------GTDKSA 330
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
PA DEF AR M+DD NT + F D ++ +N + K +
Sbjct: 331 VPAGG-------DEFKARFIEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSED 373
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-----VLQLI 353
+S + +++E+ +LGL L+Q + LK TE+D + LI
Sbjct: 374 MSAANGMAA---QLRELASVLGL---------LEQDPEVFLKGGAQTEDDAEVAKIEALI 421
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++R ARKNKD++++D R +LT GI L D + TIWR
Sbjct: 422 QQRLDARKNKDWAQADAARDELTAMGIVLEDSAQGTIWR 460
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|337738383|ref|YP_004637830.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
gi|384459893|ref|YP_005672313.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|21264018|sp|Q97ED6.1|SYC_CLOAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
gi|336292051|gb|AEI33185.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum DSM 1731]
Length = 464
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 224/385 (58%), Gaps = 34/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++++ +I D + + + AY ++GDV+F YG+LSGQ LE+ AG +
Sbjct: 108 TCNPRATEYIGKIIDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
AVD RK++PADFALWK+ K GEPSW+SPWG GRPGWHIECS M+ L DIH G ID
Sbjct: 168 AVDDRKKSPADFALWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAID 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A YWMH ++ NNEKMSKSL NF T R I + Y +
Sbjct: 228 LIFPHHENEIAQSEARTGKPFSKYWMHAAYLNINNEKMSKSLNNFLTARDILKEYDAEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE-- 247
R FL+SAHYR+PLN++ +++A ++ +Y T+ + L+ TA N +E
Sbjct: 288 RLFLLSAHYRTPLNFTEESIEAAKTSLERLYNTINNLGSLLN------NTAESNDDSEYL 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
++ R++F +M DD NT+ ++ F D K IN ++N K ++ +SL+ L K
Sbjct: 342 KALDSYREKFIEKMDDDFNTADGISVIF-DLAKDINININGKSSKAAVEKAISLMRELGK 400
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
P G +LQ+++ L E+++ LIE+R ARKNKD++
Sbjct: 401 ---------------PLG----ILQKVEKHNL------EDEIQNLIEQRQNARKNKDWAL 435
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR DL +GI L D + W+
Sbjct: 436 ADKIRDDLKERGIVLEDTPEGIRWK 460
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 217/382 (56%), Gaps = 20/382 (5%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P VS HME I DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V+
Sbjct: 114 PYVSKHMEDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVN 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+ KRNP DFALWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIF
Sbjct: 174 TAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENEIAQS A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+F
Sbjct: 234 PHHENEIAQSEGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYF 293
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCI 250
L+S HYRSPL++S +L+ A + L+D + ++ N + +
Sbjct: 294 LLSTHYRSPLDFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAA 349
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
+ +EF M+DD NT + TG D +K IN N + +++ ++IE+ +
Sbjct: 350 ARTIEEFRQAMNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIEKE-AVIEA----KE 403
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
K +L ILG+L SE Q L E ++ R ARK K + +D+
Sbjct: 404 TFKTILDILGILE----SEWNTQESYAGSDYDALME----MILSVRETARKEKQYKLADE 455
Query: 371 IRADLTRKGIALMDMGKETIWR 392
IR L GI + D W+
Sbjct: 456 IRDKLAELGIIVEDSATGARWK 477
>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
Length = 454
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/395 (42%), Positives = 226/395 (57%), Gaps = 24/395 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T P+VS HM I MI ++ AY +EGDV+F++ +YG+LSG+ E+
Sbjct: 76 LNVRPATVHPKVSTHMGDIIAMIRRLEEKGHAYEMEGDVYFSIPSFKDYGKLSGRSQEDM 135
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RKR+P DFALWK K GEPSWDSPWG GRPGWHIECSAMS YL FDI
Sbjct: 136 QAGARVEVDERKRHPMDFALWKKVKPGEPSWDSPWGKGRPGWHIECSAMSQKYLGDTFDI 195
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DLIFPHHENEIAQS A + ++ YW+HNG +T N EKMSKSLGNFFT+RQI +
Sbjct: 196 HGGGQDLIFPHHENEIAQSEACTSTAPMARYWLHNGFITVNQEKMSKSLGNFFTLRQILK 255
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++ +R +L+S HYRSPL++ +L++A + + + E AL R
Sbjct: 256 KFSGDVVRFYLLSTHYRSPLDFDDTKLEAAQKGLQRLRTGRRLLEEALKDSARQSGNNR- 314
Query: 243 NPAAE-----DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
PAA+ D K +++F M DD NT+ L+ F D + N+ L+ + +
Sbjct: 315 -PAAQREKLADQWTKTKNDFREAMDDDFNTALALSLLF-DLARETNAFLHGGEGLGAEDL 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
QL LR + ++ ++G+ SE + D L + + LI RA
Sbjct: 373 QL-----LRHVAETFDQLSGVMGI----ELSETAEAADDS------LVDGLMDLLISLRA 417
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK KD++ +D+IR L I + D + W+
Sbjct: 418 EARKKKDWATADKIRDGLKELAIIIEDTPQGARWK 452
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 224/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ +I +++ +++ + AYV + GDV F V+ +YG+LSGQ LE
Sbjct: 103 LGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D A + G ++
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAA----GGDEQV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
D F M DD NT + F D ++ IN + K + +++
Sbjct: 339 ------------DRFKEAMDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
L ++E+ +LG +LQQ + LK E EE ++ +LI ER AR
Sbjct: 377 AGLGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 225/394 (57%), Gaps = 42/394 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ + +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----VAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +KE+ +LGLL P A+ LQ D E+ E + LI++R
Sbjct: 382 V---------RLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNE 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ K+++ +D++R L I L D T WR
Sbjct: 424 AKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 169/392 (43%), Positives = 213/392 (54%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + H+ +I +++ Q+I AYV GDV FAV+ P+YG LS Q LE
Sbjct: 103 LNIARPDLEPRATHHIPEIIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSLGNFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+ G +
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALR------------GTEPQA 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA D F M DD NT + F + +N LK + Q +L
Sbjct: 331 EPAGGDVFEA---RFREAMDDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALA 381
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LRK+ +ILGLL P + + Q D + + E LI++R AR
Sbjct: 382 AELRKLA-------KILGLLEQDPEVFLQGGAQADDSEVAQIE-------ALIKQRNDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L GI L D + T WR
Sbjct: 428 AAKDWAMADSARDQLNALGIVLEDGPQGTTWR 459
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 225/393 (57%), Gaps = 35/393 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR ++H+ QI MI ++++ AY+ E GDV F+ + YG+LSGQ
Sbjct: 111 FAKLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQD 170
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ RAG R+ V+ KR+P DF LWK AK GEP W SPWG GRPGWHIECSAM+ YL +
Sbjct: 171 ITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCRYLGT 230
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS +A V+YW+H G VT N EKMSKSL NFFT+R
Sbjct: 231 HFDIHGGGSDLIFPHHENEIAQSTSANVGPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRD 290
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I R+ ++R FL+SAHYR PLNYS + A ++ +Y Q + + S ++H
Sbjct: 291 ILNRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRS--EQH--- 345
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ R F M DD NT L F+ + +N L +
Sbjct: 346 -----------DAWRARFCEAMDDDFNTPQALAILFE-----LTREINRLCGTNDDEAA- 388
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L +L+ + N +LGLL A L+ D L AEL + + +LI +R+ A
Sbjct: 389 ALATTLKDLGN-------VLGLLEQSA-DAFLKNRSD--LHPAEL--QLIEKLIHQRSEA 436
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ + K+D++R +L +GI L D+G+ T WR
Sbjct: 437 RRMGKWDKADRLRNELAEQGIDLEDVGENTSWR 469
>gi|365835886|ref|ZP_09377294.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364565006|gb|EHM42743.1| cysteine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 469
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 215/392 (54%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + H+ +I +++ Q+I AYV GDV FAV+ P+YG LS Q LE
Sbjct: 111 LNIARPDLEPRATHHIPEIIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQ 170
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FD
Sbjct: 171 LQAGARVEIADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFD 230
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSLGNFFTIR + +
Sbjct: 231 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLQ 290
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+ G ++
Sbjct: 291 HYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALR------------GTDSKA 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA D + F M DD NT + F + +N LK + Q +L
Sbjct: 339 EPAGGD---EFESRFREAMDDDFNTPEAYSALFD-----LAREVNRLKSEDMAQAN-ALA 389
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LRK+ +ILGLL P + + Q D + + E LI++R AR
Sbjct: 390 AELRKLA-------KILGLLEQDPEVFLQGGAQADDSEVAQIE-------ALIKQRNDAR 435
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L GI L D + T WR
Sbjct: 436 AAKDWAMADSARDQLNALGIVLEDGPQGTTWR 467
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5.1|SYC_CLONN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 231/392 (58%), Gaps = 33/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR +++M++I + +I+ AY V GDV+F+ ++ YG+LSGQ L++
Sbjct: 102 LNIKRATANPRATEYMDEIIQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R++VD RK++P DFA+WK+ K GEPSW+ PWG GRPGWHIECS M+ L DI
Sbjct: 162 QAGARISVDERKKDPMDFAIWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS A + +YWMH+ ++ NN+KMSKSL NFFT R+I E+
Sbjct: 222 HAGGADLVFPHHENEIAQSEARNGKTFANYWMHSAYLNINNKKMSKSLNNFFTTREILEK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++SAHYR+PLN+S L SA + +Y + + E L K ++
Sbjct: 282 YDAEVIRLFMLSAHYRTPLNFSDDLLQSAKASNERLYNAIGNLERLLDEV----KVDKVT 337
Query: 244 PAAEDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ + L ++++ +M DD NT+ ++ F D +K IN+++N K+ + L
Sbjct: 338 ENEKEYVKNLESYKEKYIEKMDDDFNTADAISVIF-DLVKDINTNINTESSKELVEYSLE 396
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LI +E+ + LG+L ++ +++ +LIE+R AR
Sbjct: 397 LI----------RELGKPLGILQKSTMLDLNAEIE---------------KLIEQRQQAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+KD++ +D+IR DL +GI L D + W+
Sbjct: 432 KDKDWALADKIRDDLKARGIVLEDTPQGVRWK 463
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 224/392 (57%), Gaps = 38/392 (9%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +KE+ +LGLL Y + L+ A E+ E + LI++R A+
Sbjct: 382 VC---------LKELAAVLGLL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T WR
Sbjct: 426 AAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 225/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ +I +++ +++ + AYV + GDV F V+ +YG+LSGQ LE
Sbjct: 103 LGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D A + + + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +++
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
+L ++E+ +LG +LQQ + LK E EE ++ QLI +R AR
Sbjct: 377 AALGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIEQLIAQRNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 230/398 (57%), Gaps = 26/398 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
M L L PT P+ ++H++ I + ++I+ AY VEG DV+F++ YG+LS +
Sbjct: 101 MDALNVLRPTIAPKATEHIDHIIRFVQRLIDLGKAYHVEGGDVYFSISSFSEYGKLSHRN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
++ +AG R+AVD +KR+P DF LWK AK GEP WDSPWG GRPGWHIECSAMS YL
Sbjct: 161 PDDMQAGARIAVDEKKRSPLDFTLWKPAKPGEPYWDSPWGKGRPGWHIECSAMSYEYLGE 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS A+ V YW+HNG V NNEKMSKSLGNF I++
Sbjct: 221 SFDIHGGGKDLIFPHHENEIAQSEASFGVPFVKYWIHNGFVDINNEKMSKSLGNFTMIKE 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA-LSP----FQ 234
+ Y P +R FL+S HYRSP++YS + S A+ IY L+ + A ++P
Sbjct: 281 VLADYSPEVIRMFLLSKHYRSPIDYSENSMREVSVALDRIYGFLERLDKAGITPPDAAGG 340
Query: 235 EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
EHG P D + L D+F N++ + F DA+K N L+
Sbjct: 341 EHG------PLWADIVEALNDDF--------NSAKAMAEIF-DAVKKGNKLLDDANDAPG 385
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
+ + + L I +++ ILG+ A ++ KD+A+ ++ + LI
Sbjct: 386 ESDR----KVLAGIYADIRSASEILGIFMICA-ADYFAAKKDRAMADQDVDSAMIDALIV 440
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ERA ARK+K+F+++D+IR L I L D + T WR
Sbjct: 441 ERANARKSKNFARADEIRDQLQAMKIVLEDGPQGTTWR 478
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153567|ref|YP_005702503.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
gi|61216247|sp|Q72BQ5.1|SYC_DESVH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 220/392 (56%), Gaps = 9/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ + H+ ++ + ++I AY GDV+F V P YG+LSG+
Sbjct: 99 MDRLNVLRADIEPKATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+++ R+G RVA K +P DFALWKAAK GEPSW SPWG GRPGWHIECSAMS ++
Sbjct: 159 IDDMRSGARVAPGEEKEDPLDFALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQ+ AA V YWMHNG V + EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLIFPHHENEIAQTEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E Y P LR FL++ HYRSP++++ +D A ++ IY+ L S +
Sbjct: 279 ILEGYLPEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATP 338
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ AE + L F + DDLNT+ L F ++ +N L K + + L
Sbjct: 339 LPADVTAE--FDTLDRAFDEALEDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKSAETL 394
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L+E L + + +VL + G P L LK+ ++R + V L+EER +
Sbjct: 395 ALLERLDGLVAKWMKVLGVFGREPEA----FLSDLKECRIRRKGIDTTKVDALLEERKSV 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R KDF+++D IR +L GI + D +W
Sbjct: 451 RAAKDFARADAIRDELAALGIEVRDTPSGAVW 482
>gi|398832797|ref|ZP_10590948.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
gi|398222691|gb|EJN09059.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. YR522]
Length = 494
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/389 (41%), Positives = 222/389 (57%), Gaps = 44/389 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + ++ Q+ ++I ++ N AY+ E GDV +AV + P YGRLSG+ L++ RAGE
Sbjct: 143 PDHEPRATQYVPQMLELIGKLQANGLAYLAEDGDVNYAVREFPGYGRLSGKSLDDLRAGE 202
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RV V++ KR+P DF LWKAAK GEP WDS WG GRPGWHIECSAM+ L FDIH
Sbjct: 203 RVDVNTGKRDPLDFVLWKAAKQGEPDEAKWDSAWGCGRPGWHIECSAMAGDLLGEHFDIH 262
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y
Sbjct: 263 GGGQDLQFPHHENEIAQSEGAHGHAFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLQKY 322
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
P +R F++ AHYRSPLNYS LD A A+ +Y L++ A S + R
Sbjct: 323 DPEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKEVPPAASGSTDEAPARRFAE 382
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A M+DD NT L+ F+ + + +N + +Q L
Sbjct: 383 A---------------MNDDFNTPLALSVLFE-----LANEVNRTRSADASRQLRQLGAR 422
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
L ++ + + L+ G + G + + + LI R+AA+ +D
Sbjct: 423 LGLLQRDPEAFLK--GGVAAGG-----------------IDQAAIEALIAARSAAKAGRD 463
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
F+ +D+IRA+LT G+ L D G T WR
Sbjct: 464 FAAADRIRAELTAAGVVLEDKPGGLTEWR 492
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 217/401 (54%), Gaps = 50/401 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++H+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDVEPKATEHIPQMIQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD+ KR+P DF LWKAAK EP W+SPWG GRPGWHIECSAM FD
Sbjct: 163 LRAGERVDVDTNKRDPLDFVLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKS 170
IHGGG DL FPHHENEIAQSC A C S+V YW+HNG + +NEKMSKS
Sbjct: 223 IHGGGADLQFPHHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKS 282
Query: 171 LGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL 230
LGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A +++ +Y TL + A
Sbjct: 283 LGNFFTIRDVLKKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAA 342
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
E+ N+ +F A M+DD T+ ++ F+ L
Sbjct: 343 FELTEN-------------TNEYTRKFFAAMNDDFGTAEAMSVLFE------------LA 377
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ K L+ + +LGLL + + D L E+ E
Sbjct: 378 NEANKHNSAEFAGCLKALGG-------VLGLLQEEPQAFLQSGASDDGLSADEINE---- 426
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
LI +R AR+ K++++SD+IR L I + D T W
Sbjct: 427 -LIAQRKTARETKNWAESDRIRDVLAAHKIIVKDGADGTTW 466
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 221/394 (56%), Gaps = 34/394 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L LPP+ +PR + H+++I+ M+ ++ AY + GDV++AV + P YG+LSG+
Sbjct: 101 AALGVLPPSDEPRATAHIDEIQAMVATLLERGLAYRADNGDVYYAVGRFPGYGKLSGKDP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAG RV + KR+P DF LWKAAK GEP+W+SPWGPGRPGWHIECSAMS L +
Sbjct: 161 QELRAGSRVEIGEAKRDPLDFVLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTCALGAH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + V WMHNG V N+EKMSKSLGNFFT+R+I
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSEGATGEPFVEVWMHNGFVRVNDEKMSKSLGNFFTVREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
RY P +R+F++++HYRSPLNY L A A+ Y L+ L P + G A
Sbjct: 281 LARYRPEEVRYFILTSHYRSPLNYDEDHLQQARGALTRFYTALR----GLPPAEPAGGEA 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ FHA M DD T L F+ + +N ++ +
Sbjct: 337 ------------FSERFHAAMDDDFATPEALAVLFE-----LVREINRVRADDEARAA-- 377
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ E++ + +LG+L P AY + D + D L E R A
Sbjct: 378 ------ALGAELRRLGAVLGILQGDPEAYLRGEGLVVDAGPAALDDAAIDALI--ERRTA 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+ + ++++D++R L GI L D + T WR
Sbjct: 430 ARQARQWAEADRLRDQLQEAGILLEDGPQGTTWR 463
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 225/394 (57%), Gaps = 42/394 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL + P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +KE+ +LGLL P A+ LQ D E+ E + LI++R
Sbjct: 382 V---------RLKELAGVLGLLYQDPEAF---LQGDADN----DEVAE--IEALIKQRNE 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ K+++ +D++R L I L D T WR
Sbjct: 424 AKAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/386 (43%), Positives = 228/386 (59%), Gaps = 41/386 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +D M+Q+ MI +I AY + GDV+++V YG+LSG+ L+
Sbjct: 103 LGVLPPDVEPRATDAMDQMFYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV +++ K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS H+L + FD
Sbjct: 163 LEAGARVDIETDKKDPLDFVLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V N+EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGMDLTFPHHENEIAQSEGANGCTFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y LR+F++S+HYRSPLN+S L+ A ++ +Y ++ G +A
Sbjct: 283 SYDGETLRYFIMSSHYRSPLNFSDDNLNLAKTSLTRLYTAMR------------GLSA-- 328
Query: 243 NPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ AA D +++ D F+A + DD NT L+ F+ A K +N L++ Q Q
Sbjct: 329 SDAAMDEVSQRFDFESRFNAALDDDFNTPIALSILFELA-KAVN-----LQRDQDIDQAN 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAA 358
+L + L+K+ G Y +LQ D LKR +L +ED+ I++R
Sbjct: 383 ALSQLLQKL----------------GGYIGILQTDADSFLKRGVDLADEDIDAKIKQRDE 426
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMD 384
A+ KDF+ SD IR +L + G+ L D
Sbjct: 427 AKAYKDFALSDHIRGELPKLGLELKD 452
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 219/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + H+ +I DM+ ++I + AYV GDV F+V P YGRLSGQ L+ +AG
Sbjct: 108 PDFEPRATLHIPEIIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + E Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHNTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLEHYDAA 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y +L+ ++++ +A+
Sbjct: 288 TVRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVEA-----------ASAD 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK-KQPKQQQLSLIESLR 306
+ + K F M DD NT + F+ + +N LK+ K L +
Sbjct: 337 EYVAK----FKVAMDDDFNTPEAYSVLFE-----MVREINRLKEADNAKASSLGV----- 382
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAARKNKD 364
++KE+ +LG +L Q D K T+E ++ LI ER AR KD
Sbjct: 383 ----KLKELADVLG---------ILDQDVDTFFKGEGSTDEVAEIEALIAERNRARAEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L G+ L D + T WR
Sbjct: 430 WPAADVARDGLNALGVILEDGPEGTTWR 457
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3.1|SYC_CLOB6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 225/390 (57%), Gaps = 27/390 (6%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLEN 62
DL T PR ++ M++I ++ +I AY ++GDV+F+ +K +YG+LSGQ LE
Sbjct: 101 DLNIERATKNPRATEFMKEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEE 160
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G R+ VD RK++P DFA+WK+ K EP+W+SPWG GRPGWHIECS M+ + L D
Sbjct: 161 LQLGARINVDERKKDPMDFAIWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETID 220
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DL FPHHENEIAQS A YW+H+ V NN+KMSKSL NFFT R+I E
Sbjct: 221 IHAGGSDLSFPHHENEIAQSEARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE 280
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y LR F++S HYR+ +N+S+ LDS A+ +Y ++ + E L + G
Sbjct: 281 KYDADVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDE- 339
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
D + K ++++ +M DD NT+ ++ F D ++ +N+++ + K+ + L LI
Sbjct: 340 ELKYRDELQKYKEKYIEKMDDDFNTADAISVIF-DLIRDVNTNITIESSKELVKYALDLI 398
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L G+ +LQ+ +L EE++ +LI+ER ARK
Sbjct: 399 REL-------------------GSPLGILQKSTKASL------EEEIERLIQERQKARKE 433
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D+IR DL +GI L D + W+
Sbjct: 434 KDWALADKIRDDLKERGIVLEDTPQGVRWK 463
>gi|366163863|ref|ZP_09463618.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 222/386 (57%), Gaps = 31/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ +++++ I D+I ++ N AY V GDV+F++ K YG+LS LE+ G V
Sbjct: 108 TVHPKATENIDAIIDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK+NP DFA+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG D
Sbjct: 168 NVDERKQNPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA YWMHNG + NNEKMSKS GNFFT+R I E++ +
Sbjct: 228 LIFPHHENEIAQSEAASGKPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVEKFDYEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S L+ A + + IY L + L EH + ++ +
Sbjct: 288 RFFMLSAHYRSPINFSADLLEQAQNGLERIYNCLDN----LVYLGEHAQAKEMSDEEKSL 343
Query: 250 INKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
++L + +F M DDLNT+ + F D +K +NS N+ ++ + SL
Sbjct: 344 QSRLLEIKGKFIEGMDDDLNTADAIAAIF-DIVKEVNS--NITASSNSSKEIIDFSHSL- 399
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
++E+ +LG + Q+ K+ L + +V LI +R ARK K++
Sbjct: 400 -----IRELGGVLG---------IGQKQKENNL------DSEVEALISQRQQARKEKNWK 439
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
SD+IR L GI L D + W+
Sbjct: 440 LSDEIRDKLKDMGIVLEDTPQGVKWK 465
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/400 (41%), Positives = 224/400 (56%), Gaps = 36/400 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ ++I AYV GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDVEPRATHHIAEIITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + K+NP DF LWK +K EPSWDSPWGPGRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEIVHIKKNPMDFVLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YWMH+G + + EKMSKSLGNFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRSPLNYS L+ A A+ +Y L+ + K+A I
Sbjct: 283 IYDAESVRYFLLNAHYRSPLNYSEENLNLAHTALERLYTALRGTD----------KSA-I 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ IN F M+DD NT + ++ F+ I +N LK + +
Sbjct: 332 ACGGENYINA----FKEAMNDDFNTPNAVSVLFE-----IAREVNKLKNED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E + ++E+ ILGLL + L D+ +K E LI++R AR
Sbjct: 375 EKANSLAARLRELADILGLLYQDPEEFLQSGLDDEEVKLIE-------SLIKQRNEARAA 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQE 402
KD++ +D R L++ + L D T WR + E E E
Sbjct: 428 KDWATADAAREQLSKMKVVLEDGANGTTWRKDIQTESEAE 467
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 219/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + HM +I +M+ +++ D AY+ + GDV F+V P YGRLSGQ L+ +AG
Sbjct: 108 PDFEPRATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VD KR+P DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVDENKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDAS 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ ++++ PA+E
Sbjct: 288 TVRYFLLSGHYRSQLNYSEDNLKQAKAALERLYTALKGLDLSVEA----------APASE 337
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+F M DD NT + F A +N LK + + +
Sbjct: 338 YVA-----KFKEAMDDDFNTPEAYSVLFDMA-----REINRLK--------VDDLAAASA 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
+ +K++ +LG +L+Q D K E ++++V Q LI ER AR KD
Sbjct: 380 LGVSMKQLGDVLG---------ILEQDVDGFFK-GEGSDDEVAQIEALIAERNRARTEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D R L G+ L D + T WR
Sbjct: 430 WAAADVARDGLNALGVILEDGPEGTTWR 457
>gi|357012836|ref|ZP_09077835.1| cysteinyl-tRNA synthetase [Paenibacillus elgii B69]
Length = 465
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 220/383 (57%), Gaps = 29/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+ +M++I I+ ++ D AY GDVFF K P YG+LS Q LE + G RV
Sbjct: 110 TLHPRVTQNMDEIIGFISGLVEKDYAYEAGGDVFFRTAKFPEYGKLSHQNLEELQYGIRV 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK +P DF LWKAAK GE SW SPWG GRPGWHIECSAM YL DIHGGG+D
Sbjct: 170 DVDERKESPQDFVLWKAAKPGEISWSSPWGEGRPGWHIECSAMIRKYLGDSIDIHGGGLD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE EIAQS +YWMHNG V N+EKMSKSLGN + ++ + +
Sbjct: 230 LTFPHHECEIAQSEGLTGQRMANYWMHNGFVNVNDEKMSKSLGNGINVHELLKTIPGEVI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+F++S HYR+PLN+S ++ A ++ I ++C AL + + ++P
Sbjct: 290 RYFMLSGHYRNPLNFSDEAVEQARGSLARI----ENCLSALKHRLKSAEAGEVDPEIAAA 345
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + +F ++M+DD NT +T F+ +N++ + ++Q L L+ L++ E
Sbjct: 346 VRNAQQQFESKMNDDFNTPDAITAVFE----LVNAANPYINREQVTAPTLELL--LKQFE 399
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ ++LG+L P A +L +E++ QLI ER AR+ K+++++D
Sbjct: 400 ----AMDQVLGILAPEA---------------EDLLDEEIEQLIVERTEARQAKNWARAD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR LT +GI L D + WR
Sbjct: 441 EIRNLLTERGIVLEDTAQGIRWR 463
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 220/401 (54%), Gaps = 50/401 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++H+ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDVEPKATEHIPQMIQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD+ KR+P DF LWKAAK EP W+SPWG GRPGWHIECSAM FD
Sbjct: 163 LRAGERVDVDTNKRDPLDFVLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAA----CQ--------DSNVSYWMHNGHVTNNNEKMSKS 170
IHGGG DL FPHHENEIAQSC A C S+V YW+HNG + +NEKMSKS
Sbjct: 223 IHGGGADLQFPHHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKS 282
Query: 171 LGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL 230
LGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A +++ +Y TL + VA
Sbjct: 283 LGNFFTIRDVLKKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNN--VAP 340
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
+ F+ T N+ +F A M+DD T+ ++ F+ L
Sbjct: 341 AAFELTENT-----------NEYTRKFFAAMNDDFGTAEAMSVLFE------------LA 377
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ K L+ + +LGLL + + D L E+ E
Sbjct: 378 NEANKHNSAEFAGCLKALGG-------MLGLLQEEPQAFLQSGASDDGLSADEINE---- 426
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
LI +R AR+ K++++SD+IR L I + D T W
Sbjct: 427 -LIAQRKTARETKNWAESDRIRDVLAAHKIIVKDSADGTTW 466
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 229/395 (57%), Gaps = 39/395 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR +++M++I + + +I+ AY V GDV+F ++ YG+LSGQ L++
Sbjct: 102 LNIKRATVNPRATEYMDEIIEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+++D RK++P DFA+WK+ K GEPSWD PWG GRPGWHIECS M+ L DI
Sbjct: 162 QAGARISIDERKKDPMDFAIWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS A + YWMH+ ++ +N+KMSKSL NFFT R+I E+
Sbjct: 222 HAGGADLVFPHHENEIAQSEARNGKAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILEK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++SAHYR+PLN+S L SA + +Y + + E L +I+
Sbjct: 282 YDAEVVRLFMLSAHYRTPLNFSNELLQSAKASNERLYNAIGNLERLLDE-------VKID 334
Query: 244 PAAED------CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
ED +N ++++ +M DD NT+ + F D +K IN+++N K+ +
Sbjct: 335 KITEDEKEYVKNLNSYKEKYIEKMDDDFNTADAIAVIF-DLVKDINTNINTESSKELVEY 393
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L LI +E+ + LG+L ++ +++ +LIE+R
Sbjct: 394 SLELI----------RELGKPLGILQKSTILDLNTEIE---------------KLIEQRQ 428
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK++D++ +D+IR DL +GI L D + W+
Sbjct: 429 QARKDRDWALADKIRDDLKARGIVLEDTPQGVRWK 463
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 225/392 (57%), Gaps = 38/392 (9%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I N AYV + DV F VE YG LS Q LE
Sbjct: 102 DLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHSGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++ Q G
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSV---QVAGSEQY 338
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
+ + F A M DD NT L F+ I +N LK + K L+
Sbjct: 339 V------------EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +KE+ +LGLL Y + L+ A E+ E + LI++R A+
Sbjct: 382 V---------RLKELAGVLGLL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T+WR
Sbjct: 426 AAKNWAVADEVRDKLKAMNIVLEDTPNGTMWR 457
>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 467
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 219/384 (57%), Gaps = 28/384 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR + ++Q+ I +I+ AYV GDV+F V YG+LSG+++E+ RAG RV
Sbjct: 109 TINPRATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V KRNP DFALWK K EP W +PWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 DVSDLKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
L FPHHENEIAQS C D+ + +W+HNG +T NNEKMSKS GNFFT+R++++ Y
Sbjct: 229 LKFPHHENEIAQS-ETCNDAPFARFWLHNGMITVNNEKMSKSKGNFFTVREVSKEYDLEI 287
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR FL++ YR+P+N+S ++ +A+ +Y E + +E T E+
Sbjct: 288 LRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERDLTED-EKKIEE 346
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
R F M DDLNT+ +T F D +K IN +L+ K+ ++ +SL+++L K
Sbjct: 347 KFQAHRQSFEKAMEDDLNTADAITAIF-DLVKDINVNLDENSAKKLLEEGMSLLKTLTK- 404
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
ILG++ K + +E++L LI+ER ARKNKDF ++
Sbjct: 405 ---------ILGIMERE--------------KNCDDLDEEILNLIKEREDARKNKDFKRA 441
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR +L KGI + D K W+
Sbjct: 442 DEIRDELLEKGIEIKDTRKGIEWK 465
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 224/392 (57%), Gaps = 38/392 (9%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL + P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEGMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +KE+ +LGLL Y + L+ A E+ E + LI++R A+
Sbjct: 382 V---------RLKELAGVLGLL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T WR
Sbjct: 426 AAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 216/385 (56%), Gaps = 36/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
PT++P + H++ + MI+ ++ + AY GDV+F+V P YG+LSG+ L + RAGE
Sbjct: 108 PTHEPCATHHVKSMIGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGE 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +DS K++P DF LWK+AK+GEP W+SPWGPGRPGWHIECSAM +L FDIHGGG
Sbjct: 168 RVDIDSSKKDPLDFVLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS A V+YWMHNG V +NEKMSKSLGNFFT+R+I + Y P
Sbjct: 228 QDLQFPHHENEIAQSEGAHDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREILKLYQPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R F++ AHYRSPLNYS L A+ +Y L++ E I+ A
Sbjct: 288 VVRFFILRAHYRSPLNYSDQHLKDTKLALDRLYIALKEVE-------------PISVARV 334
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
D +F M DD NT + F A S +N ++ +L L
Sbjct: 335 DWNYPYAQKFKRAMDDDFNTPDAIALLFDLA-----SDINKTGSREHAGLLKALGGLLGL 389
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
++ +E L+ A SE+ + DV QLI+ER ARK +S
Sbjct: 390 LQQNPQEYLQ-----NKAASSEL------------NSSAHDVEQLIQERINARKEGRYSD 432
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D IR L +GI L D + T WR
Sbjct: 433 ADTIRKQLQEQGIILEDSSQGTTWR 457
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 219/390 (56%), Gaps = 41/390 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR + ++ Q+ +I Q+++ AY DV+++V P YGRLSG+ L+
Sbjct: 103 LGVLPPDHEPRATAYVAQMLALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMSA L FD
Sbjct: 163 LRAGERVEVDPNKRDPMDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A + V+YW+HNG V +NEKMSKSLGNFFTIR++ +
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGAHGCTFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y +R F++ AHYRSPLNYS LD A A+ +Y L+ A G
Sbjct: 283 KYDAEIVRFFILRAHYRSPLNYSDAHLDDARGALTRLYTALKGAPAA-------GPVDWD 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PAA F M DD NT + F+ A + +
Sbjct: 336 APAAA--------RFRGAMDDDFNTPEAIAVLFELA-------------AEANRGDTGAA 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++LR + ++GLL A S+ LQ A L ++ I R AARK
Sbjct: 375 QTLRNLGA-------VIGLLQRDA-SDFLQ----AGTSEAGLDASEIEARIAARQAARKA 422
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+DF++SD+IR +L GI L D T WR
Sbjct: 423 RDFAESDRIRDELAAAGIVLEDGPGGTTWR 452
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 224/392 (57%), Gaps = 38/392 (9%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL + P +PR + H+ +I M+ ++I N AYV +GDV F VE YG LS Q LE
Sbjct: 102 DLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K GEPSW SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T ++EKMSKSLGNFFTIR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDDEKMSKSLGNFFTIRTML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
E+Y LR+F ++AHYRS LNYS+ LD A A+ +Y +L+ C++++
Sbjct: 282 EKYESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEV--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
E + + F A M DD NT L F+ I +N LK + K L+
Sbjct: 333 --AGGEQYV----EAFKAAMDDDFNTPGALAVLFE-----IAREVNKLKTEDMAKANGLA 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +KE+ +LGLL Y + L+ A E+ E + LI++R A+
Sbjct: 382 V---------RLKELAGVLGLL----YQDPEAFLQGDA-NNDEVAE--IEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T WR
Sbjct: 426 AAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 223/404 (55%), Gaps = 50/404 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++H+ Q+ MI ++I+N AY E GDV++AV + YG+LSG+ L
Sbjct: 101 AALGVIRPDVEPKATEHVRQMLAMIQRLIDNGKAYPAENGDVYYAVREFSAYGQLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGERV VD KR+P DF LWKAAK EP+W+SPWG GRPGWHIECSAMS
Sbjct: 161 DDLRAGERVEVDGFKRDPLDFVLWKAAKPSEPAWESPWGQGRPGWHIECSAMSEELFGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAA----CQ--------DSNVSYWMHNGHVTNNNEKMS 168
FDIHGGG DL FPHHENEIAQSC A C +S+V YW+HNG + + EKMS
Sbjct: 221 FDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNHGGKTIESHVKYWLHNGFIRVDGEKMS 280
Query: 169 KSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV 228
KSLGNFFTIR + + Y +R F++ AHYRSPLNYS LD A A+ +Y L++
Sbjct: 281 KSLGNFFTIRDVLKAYDAEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPP 340
Query: 229 ALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM 288
A E+ N F A M+DD T + F+
Sbjct: 341 AECAVSEN-------------TNDYTRRFFAAMNDDFGTVEAVVVLFE------------ 375
Query: 289 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 348
L + K L L+ + + I+GLL + L+ L+ A L+ E+
Sbjct: 376 LANEVNKTNNAELAGCLKALSS-------IIGLLE----RDPLEFLQGCA-ASGSLSNEE 423
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ LI +R AR K++++SD+IR LT + I L D T WR
Sbjct: 424 IENLIAQRKQARAEKNWAESDRIRDLLTAENIILEDGANGTTWR 467
>gi|389852533|ref|YP_006354767.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249839|gb|AFK22692.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 451
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 222/395 (56%), Gaps = 26/395 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H+E I I ++I AY V+F V+K YG+LSG ++
Sbjct: 76 MRALKVKPADIYPRVTEHIEDIIRFIEKLIEKGYAYEGSDGVYFEVQKFSEYGKLSGIKI 135
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E R G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS+ YL
Sbjct: 136 EELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGDGRPGWHIECSVMSSKYLGES 195
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF T+R++
Sbjct: 196 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVREL 255
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY+P +R F++ HYRSPL+Y+ L A + + +Y TL++ A+ +
Sbjct: 256 LQRYNPEVIRFFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLENIRTAMKEAELSYTWG 315
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQ 298
A + I + +F+ M DD NT+ L F+ +++++N + + ++PK+
Sbjct: 316 EEEFEAYEAIKSAKRKFYEAMDDDFNTAEALKAVFE-----VSNAINRYLTEVERPKESV 370
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERA 357
L + E +I+ SE+ +D + EE +++ L+E R+
Sbjct: 371 L----------RKAWEFFKIV--------SEIFGIFEDYFKEEKVGEEEKLIELLVEVRS 412
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K + +D+IR +L + GI L D +TIW+
Sbjct: 413 QLRKEKKYDLADKIREELRKLGIQLEDKKDKTIWK 447
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 223/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K + L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDVHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDHIRDLLNEHKIILEDNAGGTTWR 471
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 224/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K + L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDVHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 223/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K + L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDVHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|381151336|ref|ZP_09863205.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
gi|380883308|gb|EIC29185.1| cysteinyl-tRNA synthetase [Methylomicrobium album BG8]
Length = 477
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/402 (42%), Positives = 227/402 (56%), Gaps = 42/402 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + + I MI ++ AY+ GDVF+AVEK +YG+LSG++LE
Sbjct: 103 LAVLPPDIEPRATQSIASIIAMIEALLAKGYAYIGSSGDVFYAVEKFRDYGKLSGKKLEE 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AGERV VD+ K+NP DF LWK AKA EPSW +PWG GRPGWHIECSAMS L + FD
Sbjct: 163 LQAGERVDVDAAKQNPFDFVLWKMAKANEPSWPAPWGDGRPGWHIECSAMSTCCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMHNG V N EKMSKSLGNFFT+R++ +
Sbjct: 223 IHGGGMDLQFPHHENEIAQSEGATGEKFVNLWMHNGFVRVNEEKMSKSLGNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y P +R F++S+HYRSPLNYS QL+ ++ A+ +Y + G TA
Sbjct: 283 QYRPEIIRFFILSSHYRSPLNYSDEQLNESATALNRLYTA------------QRGVTAPD 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P D R F M+DD NT ++ F + LN K K +
Sbjct: 331 APILPD----YRGRFEQAMNDDFNTPVAVSVLFD-----LARELNKAKTKD--------V 373
Query: 303 ESLRKIENEVKEVLRILGL--------LPPGAY-SEVLQQLKDKALKRAELTEEDVL--Q 351
E + +K++ +LG+ L GA+ S V + A++ DV +
Sbjct: 374 EQAGQFAASLKQLGGLLGILQDDPEAWLKSGAFHSAVYESATAGDWVSADVMRGDVWIER 433
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETI-WR 392
I+ R A+K K ++ +DQIR L +GI L D T WR
Sbjct: 434 QIQARLDAKKAKSWALADQIRNQLKEQGIILEDAPNGTTNWR 475
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 228/388 (58%), Gaps = 31/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+E I MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD
Sbjct: 129 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 188
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 189 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 248
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 249 PHHENEIAQSEGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 307
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE +H +
Sbjct: 308 YFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEK 363
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A E +EF A MSDD NT+ + F A +N+ + ++ + E+
Sbjct: 364 AKE-----YEEEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEA 413
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+ +++ K + ++G+L + + A EE + ++ R A R K
Sbjct: 414 IAEVKRIFKFMTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQ 465
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI + D + W+
Sbjct: 466 WALADCIRDRLAEIGITIEDSPQGARWK 493
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418360744|ref|ZP_12961412.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688048|gb|EHI52617.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 458
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/392 (43%), Positives = 226/392 (57%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ +I +++ +I D AYV + GDV F V+ +YG+LSGQ LE
Sbjct: 103 LGMVRPDVEPRATQHISEIIELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVGVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL+S HYRS LNYS L A A+ +Y L+D VA + + + AR
Sbjct: 283 HYDAESVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +S+
Sbjct: 342 VDA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKAEDMSVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
L ++E+ +LG +LQQ D LK E EE ++ +LI ER AR
Sbjct: 377 AGLGA---RLRELGAVLG---------ILQQDPDAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D RA LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARARLTEMGIVLEDSAGKTSWR 456
>gi|427414123|ref|ZP_18904313.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
gi|425714499|gb|EKU77502.1| cysteine-tRNA ligase [Veillonella ratti ACS-216-V-Col6b]
Length = 484
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 230/385 (59%), Gaps = 23/385 (5%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+H+++I MI+ +I AY ++GDV+++VEK +YG+LSG+ L++ AG RV VD
Sbjct: 114 PRVSEHIDEIIAMISTLIEKGFAYELDGDVYYSVEKFEDYGKLSGRTLDDMEAGARVDVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWK+AK GEP W+SPWG GRPGWHIECS MS YL +FD HGGG DLIF
Sbjct: 174 DRKQNPMDFALWKSAKPGEPYWESPWGNGRPGWHIECSTMSNKYLGEEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C S V YW+HNG +T N EKMSKSL NFF ++ I + Y P ALR
Sbjct: 234 PHHENEIAQSEGCTGHHPS-VRYWLHNGFITINQEKMSKSLNNFFLVKDILKEYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
+FL+S HYRSPL++S +L+ A+ ++ + +Q+ + QE G+ A D
Sbjct: 293 YFLMSTHYRSPLDFSDERLEEANKSLERMTTAIQN--LLYLENQEEGECDEEAKALLDNA 350
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDAL-KFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
K +EF MSDD NT+ L GA L K IN ++ K E+L ++
Sbjct: 351 RKYAEEFEEAMSDDFNTA--LAGAPMFGLAKEINIYYQAVQNCNGKVCH----ETLAEVR 404
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE-EDVLQLI-EERAAARKNKDFSK 367
N K + I+G +L+Q + A E E ++Q+I R AR+ K +
Sbjct: 405 NIFKMMTDIIG---------ILEQAWEGPQSGAGAEEYEKLMQVILNVRQNAREQKLWDL 455
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D IR +L GI + D + W+
Sbjct: 456 ADAIRDELGNIGIVIEDSPQGARWK 480
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 223/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NDYTSRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K +L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDANLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|373106799|ref|ZP_09521099.1| cysteine-tRNA ligase [Stomatobaculum longum]
gi|371651738|gb|EHO17164.1| cysteine-tRNA ligase [Stomatobaculum longum]
Length = 469
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/402 (39%), Positives = 224/402 (55%), Gaps = 43/402 (10%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
MA + P +Y PR ++ + + +MI ++I+ AYV +G V++ VE P+YG+LS +
Sbjct: 99 MAGMNVRPASYNPRATEEIPGMIEMIQKLIDGGHAYVAADGTVYYRVESFPDYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
+E N+AG R V + K +P DF LWK K GEP W+SPW GRPGWHIECS MS Y
Sbjct: 159 VEENQAGLRTLKVRGEEAKEDPNDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L DIHGGG DL+FPHHENEIAQS A V YWMHN + +N KMSKSLGNF T
Sbjct: 219 LGETIDIHGGGEDLVFPHHENEIAQSEAVSGKKFVRYWMHNAFLNIDNVKMSKSLGNFKT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSAS---DAVFYIYQTLQDCEVALSPF 233
+RQI+E Y LR F++SAHYRSPLN+S +D A D + + L+DC A
Sbjct: 279 VRQISEEYDLQVLRFFMLSAHYRSPLNFSREMMDGAKASLDRILTAMEHLRDCLAA---- 334
Query: 234 QEHGKTARINPAAED---CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
K + A E+ + LR++F A M DD NT+ ++ F+ M+K
Sbjct: 335 ---AKAEALTGAEEEELAAFDALREKFEAAMDDDFNTADAISVIFE-----------MVK 380
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ + S + +++ + ++L +LGLL ++ E + V
Sbjct: 381 RANITVTEESSKAYITRVKELLDKLLDVLGLLSE---------------RKEENLDARVE 425
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
LI ER ARK K+F+++D+IR +LT GI L D + W+
Sbjct: 426 ALIAERQTARKEKNFARADEIRNELTEMGILLEDTKEGVKWK 467
>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|122958668|sp|Q0TMM4.1|SYC_CLOP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 466
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 220/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 348 LNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL---- 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
GA + Q+ L EE++ LI +R ARK++DF+ +D
Sbjct: 403 ---------------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFTLAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIVLEDTPQGVRWK 464
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
gi|187629846|sp|A0L4P8.1|SYC_MAGSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus marinus MC-1]
Length = 490
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 163/400 (40%), Positives = 224/400 (56%), Gaps = 29/400 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L P +P+ ++H+ ++ MI +++ AY GDV++AVE+ NYG+LSG+ L
Sbjct: 108 MAALGVQPADIEPKATEHLPEMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVL 167
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ AG RV VDS K+NP DF LWK AK EP WDSPWG GRPGWHIECSAM YL +
Sbjct: 168 DEQEAGARVEVDSNKQNPMDFVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGAS 227
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNN-----EKMSKSLGNFF 175
FDIHGGG DLIFPHHENEIAQ+ V+YW+HNG V N EKMSKSLGNF
Sbjct: 228 FDIHGGGRDLIFPHHENEIAQTEGCTGQHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFH 287
Query: 176 TIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS--PF 233
TIR + Y LR F++++HYRSPL++S L++A + IY L+ + L P
Sbjct: 288 TIRDLLALYPGEVLRFFILNSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPG 347
Query: 234 QEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
G+ A + A L + + M DD NT A+ F+ + ML
Sbjct: 348 TPIGEPADVPAGAP---QDLVENYLKAMDDDFNTPQ--------AIAFLFEAAKMLNTAI 396
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE--LTEEDVLQ 351
+Q+ ++I + ++ + L + G P +L ++ AE L E +
Sbjct: 397 SEQKDPAVIATWARLIRGLGHHLGLAGQDP---------ELWFRSGIGAEQGLQAEAIEA 447
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
LI ER+AAR K++++SD+IR L ++GI L D T W
Sbjct: 448 LIAERSAARAAKNWAESDRIRDTLAQQGIVLEDGQHGTQW 487
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 228/388 (58%), Gaps = 31/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+E I MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q +V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSG-QHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE +H +
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQH----LLEK 348
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A E +EF A MSDD NT+ + F A +N+ + ++ + E+
Sbjct: 349 AKE-----YEEEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQTVTGREGVVCQEA 398
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+ +++ K + ++G+L + + A EE + ++ R A R K
Sbjct: 399 IAEVKRIFKFMTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQ 450
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI + D + W+
Sbjct: 451 WALADCIRDRLAEIGITIEDSPQGARWK 478
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 221/395 (55%), Gaps = 26/395 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L+ P PRV++H+ I I ++ AY V+F V K YG+LSG ++
Sbjct: 101 MAALKVKPADVYPRVTEHVNDIIAFIERLEEKGYAYEGSDGVYFEVSKFKEYGKLSGIKV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECSAMS+ YL
Sbjct: 161 EELKKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSAMSSKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V EKMSKSLGNF T+R++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACFGHEWVRYWLHTGFVMVKGEKMSKSLGNFVTVREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+Y+ L A + + +Y TL++ VA+ +
Sbjct: 281 LQRYSPEVIRFFVLQKHYRSPLDYTEEGLMHAKNNLERLYNTLENIRVAMERVELAYTWG 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQQ 298
+ I + R +F+ M DD NT+ L F+ +++++N + K ++PK+
Sbjct: 341 EEEFELYEVIKEGRRKFYEAMDDDFNTAEALKAVFE-----VSNAVNRYLTKVERPKES- 394
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERA 357
LRK K V + GL +D ++ EE +++ L++ RA
Sbjct: 395 -----VLRKAWEFFKAVSEVFGL------------FEDYFKEQKTGNEEALIKLLVDVRA 437
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K + +D+IR +L + GI L D + T+W+
Sbjct: 438 QLRKEKRYDLADKIREELRKLGIQLEDTPQGTVWK 472
>gi|422347491|ref|ZP_16428403.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|373223945|gb|EHP46286.1| cysteinyl-tRNA synthetase [Clostridium perfringens WAL-14572]
Length = 466
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 220/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 348 LNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL---- 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
GA + Q+ L EE++ LI +R ARK++DF+ +D
Sbjct: 403 ---------------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIVLEDTPQGVRWK 464
>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|21264002|sp|Q8XHQ5.1|SYC_CLOPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 466
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 220/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 348 LNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL---- 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
GA + Q+ L EE++ LI +R ARK++DF+ +D
Sbjct: 403 ---------------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIVLEDTPQGVRWK 464
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 220/384 (57%), Gaps = 33/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PR ++H+E I + I +I AY V GDV+FA K P YG+LSGQ LE AG RV
Sbjct: 110 HPRATEHIEDIIEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEP 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+K++P DFALWKA K GEPSW SPWG GRPGWHIECSAM+ +L DIHGGG DLI
Sbjct: 170 GEKKKDPIDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENE+AQS A ++MH G++ NNEKMSKSLGNFFT+R I + Y+P LR
Sbjct: 230 FPHHENEVAQSEAFTGKPFARFFMHVGYLNINNEKMSKSLGNFFTVRDILKEYNPEVLRF 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
++S+HYRSP+N+S LD + A+ +Y L A+ + +N E+ +
Sbjct: 290 LMLSSHYRSPINFSRELLDQSKSALERLYNAL----YAMEHLENAAPERPLNGEEEEYLR 345
Query: 252 KL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+ +++F M DD NT+ + F D ++ N SLN + S E+++K
Sbjct: 346 RQLENKNKFKDAMDDDFNTAGAIAVLF-DMIREFNVSLN----------ENSSREAVKKT 394
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ V E+ +LG + V L +E++ Q I+ER ARK K+++ +
Sbjct: 395 KEMVLELGGVLGFF--SKFEPV-------------LLDEEIEQKIKEREEARKAKNYALA 439
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR +L +GI L D W+
Sbjct: 440 DKIRDELRARGIILEDTPAGVRWK 463
>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229558624|sp|B2UY90.1|SYC_CLOBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 470
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/398 (39%), Positives = 225/398 (56%), Gaps = 41/398 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
LQ T PR ++++E I D + Q+I AY VEGDV+F +K +YG+LSGQ +E+
Sbjct: 102 LQIERATVNPRATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDL 161
Query: 64 RAG----ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ G D RK++P DFA+WK+ K GEP+W PWG GRPGWHIECS M+ L
Sbjct: 162 QMGASNRTSSVADERKKDPMDFAIWKSQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGD 221
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIH GG+DL FPHHENE+AQS A +YWMH+ +V NN+KMSKSL NFFT R
Sbjct: 222 TIDIHAGGMDLTFPHHENEVAQSEALTGVQFANYWMHSAYVNINNQKMSKSLNNFFTARD 281
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I + Y +R F++SAHYR +N+S LDSA +V +Y + + E + +
Sbjct: 282 ILKEYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLID------EV 335
Query: 240 ARINPAAEDC-----INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+R N E+ +NK R+++ +M DD NT+ LT F+ K N+++N+ K+
Sbjct: 336 SRENMNEEEVRYLNSLNKYREKYIEKMDDDFNTADALTVLFE-LTKDTNTNINVNSSKEL 394
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
+ L LI L GA +LQ++ +L E+++ LI+
Sbjct: 395 VNKALDLIREL-------------------GAPLGLLQKITKGSL------EDEIESLIQ 429
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+R ARKNKDF+ SD+IR DL +GI L D + W+
Sbjct: 430 QRQDARKNKDFALSDKIRDDLKDRGIVLEDTPQGVRWK 467
>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956489|sp|Q0SQC1.1|SYC_CLOPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
Length = 466
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 220/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 348 LNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL---- 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
GA + Q+ L EE++ LI +R ARK++DF+ +D
Sbjct: 403 ---------------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFALAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIVLEDTPQGVRWK 464
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 221/392 (56%), Gaps = 43/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L + P +P+ ++ ++ + MI +I AYV DVF+AV K YG+LSG+ LE+
Sbjct: 103 LGVISPDAEPKATESIDAMIIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV VD K+N DF LWK+AK GEP W+SPWG GRPGWHIECSAMS +L FD
Sbjct: 163 LRAGNRVEVDKFKKNSFDFVLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCA--ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
IHGGG DL FPHHENEIAQS A CQ +N YW+HNG V +NEKMSKSLGNFFTIR+I
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEAFNGCQMAN--YWLHNGFVKVDNEKMSKSLGNFFTIREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
Y P +R F++ A YRSPLNYS L+ A + +Y ++ G
Sbjct: 281 LNHYEPEIVRFFVLKAQYRSPLNYSDTHLEDAKQGLTRLYLAIR------------GNDT 328
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
RI+ D N +F + DD NTS +A+ + S N + K Q++
Sbjct: 329 RIDQEI-DWKNNFASQFKDALDDDFNTS--------EAISILFSLANEVNKSNQDQEKQL 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LI ++ ILG+L E+ +L + ++ + D+ LI +R +A+
Sbjct: 380 LI-----------QLANILGIL------EMDPELFLRGNIKSSDNDIDIDLLISDRLSAK 422
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNKD+ K+D+IR L I L D TIWR
Sbjct: 423 KNKDYQKADEIRIFLEGHDILLEDTPNGTIWR 454
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 231/398 (58%), Gaps = 37/398 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L CL P +P+ +D ++ I+ +I +I AY + GD++F++E P+YGRLSG++L +
Sbjct: 105 LGCLSPDAEPKATDSIQDIQRIIQTLIEKKYAYQIANGDIYFSIESYPDYGRLSGRKLAD 164
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG +RV++++ K +P DF LWKA+K EP W SPWG GRPGWHIECSAMS +L +
Sbjct: 165 MQAGASQRVSLETEKHHPFDFVLWKASKPNEPFWQSPWGNGRPGWHIECSAMSMCHLGNH 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS AA + V+YW+H G + N EKMSKSLGNF TIR
Sbjct: 225 FDIHGGGGDLIFPHHENEIAQSEAATGEKYVNYWLHTGFINVNGEKMSKSLGNFLTIRDA 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ YHP +R ++S+HYRSP+++S L + YQ + + ++ + KT
Sbjct: 285 FKSYHPEVIRLLMMSSHYRSPIDFSDHILKDTQKVLSRFYQAIYHAQPFIASKDDAIKT- 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
E N +F+ M+DD NT L F D LK +N + LK++ P+
Sbjct: 344 ------ELNSNPFIQKFNQAMNDDFNTPEALVICF-DLLKQLNIA---LKEESPE----- 388
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE------LTEEDVLQLIE 354
K+ + +L I +L + Q +K LK + L+E+++ + I
Sbjct: 389 ------KVIKNYQLLLWIGNIL------NIFQYDPEKILKHSASEQDSPLSEQEIQEAIL 436
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AR NK ++ +DQIR L + GI L D +TIWR
Sbjct: 437 ARNTARSNKQYALADQIRQKLLQSGILLEDTQTQTIWR 474
>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|229558799|sp|B0KCH9.1|SYC_THEP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558800|sp|B0K5F6.1|SYC_THEPX RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 466
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/386 (41%), Positives = 221/386 (57%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H+E I + I +I+ AYVV G+V+F K +YG+LS + +E +AG R+
Sbjct: 108 TVHPKATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DF LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINEEKKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA YWMH G++ NNEKMSKS GNFFT+R+ITE+Y+P L
Sbjct: 228 LVFPHHENEIAQSEAAYGQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYNPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYRSP+N+S+ ++ A A Y+ L + L K +N +
Sbjct: 288 RLFMLMAHYRSPINFSLDLMEQAKSA----YERLLNAVANLKHLLTVCKDRELNEEEKRI 343
Query: 250 INKLRDEFHAR---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
K + M DD NT+ ++ F+ + K N++++ K+ L+E +
Sbjct: 344 KEKFEEYKKEFEDAMDDDFNTADAISVLFEMS-KTANTNISGNSSKK-------LVEYIL 395
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
I ++ E ILGL G EL +E++L LIEER ARK K++
Sbjct: 396 DIFLKLSE---ILGLSYRGV--------------ETELNDEEILALIEERQKARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L KGI L D + W+
Sbjct: 439 LADEIRDRLREKGIILEDTPEGVRWK 464
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/388 (43%), Positives = 218/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + HM +I +M+ ++I + AYV GDV F+V P YGRLSGQ LE +AG
Sbjct: 108 PDFEPRATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FDIHGGG
Sbjct: 168 RVEVEDAKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTKYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLNHYDAA 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A + IY L+D ++ + AE
Sbjct: 288 TVRYFLLSGHYRSQLNYSEENLKQAKSGLERIYTALKDLDLTVDA-----------APAE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
I +F M DD NT + F+ + +N LK QQ +L +L++
Sbjct: 337 AFIA----QFKRAMDDDFNTPEAYSVLFE-----MVREINRLKLTD-MQQASALGVALKQ 386
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
+ +VL ILG Q D K E ++++V + LI ER AR KD
Sbjct: 387 L----ADVLGILG------------QDVDTFFK-GEGSDDEVAEIEALIVERNRARTEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L G+ L D + T WR
Sbjct: 430 WPAADVARDGLNALGVILEDGPEGTTWR 457
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 221/383 (57%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
+Y PR +++M QI ++ ++I+ AY V G V+F V+ P YGRLS Q ++ AG R+
Sbjct: 110 SYNPRATEYMPQIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD K+ P DF LWK K GEP+WDSPWG GRPGWHIECS MS L DIH GG+D
Sbjct: 170 EVDDAKKCPLDFVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQ+ AA V++W+HN ++ + EKMSKSLGNF T R+ + Y PLA+
Sbjct: 230 LTFPHHENEIAQAEAATGKPFVNFWLHNEYILIDKEKMSKSLGNFLTAREARKHYSPLAI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S L+ A V + L++C L + + + + +
Sbjct: 290 RAFMLSAHYRSPVNFSPEGLEQAGAMV----ERLRNCWSDLQFAKSRRDLSYDDASLSEA 345
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + R++F M DD NT+ L GA + +K +N+ L K ++ K
Sbjct: 346 VRQGREDFEEAMDDDFNTAGAL-GAVFEVVKAVNTHLKSSGALSGKG-----LDDAEKFF 399
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+++EV+ +LG L + ++ L+E+R AARK K+F++SD
Sbjct: 400 RDIEEVMGLLG------------------LSHETDGDAEIDALVEQRNAARKAKNFAESD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
++R +L +GI L D + T W+
Sbjct: 442 RLRDELAARGIVLEDTPQGTKWK 464
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 216/390 (55%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + HM +I M+ +I AYV +GDV F VE NYGRLS Q LE
Sbjct: 103 LNILRPDVEPRATKHMPEIIAMVEALIKRGHAYVAADGDVMFDVESYQNYGRLSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEIKSVKKNPMDFVLWKMSKPNEPSWESPWGKGRPGWHIECSAMNSKELGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T N EKMSKSL NFFTIR I
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHDGEYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y ++R+F ++A YRS L+YS + A A+ +Y L+ C+ +
Sbjct: 283 KYDSESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDFNVKM---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P ++ + + F M DD NT L F A +N LK + I
Sbjct: 333 -PESDQYV----EAFKEAMDDDFNTPGALAVLFDLA-----REINKLKTEN--------I 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ + +K++ +LGLL S + D + + E QLI++R AR
Sbjct: 375 NEANRLSSRLKQLAGVLGLLEQDPESFLQGDTADDEVAKIE-------QLIKQRNEARAA 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++++D R +LT GI L D T WR
Sbjct: 428 KDWAQADAARNELTAMGIVLEDGANGTTWR 457
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 226/391 (57%), Gaps = 35/391 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR ++ M+QI MI +I AY GDV+++V NYG+LS + ++
Sbjct: 103 LGVLPPDVEPRATNAMKQIFYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDK 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG R+ ++S K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAMS H+L + FD
Sbjct: 163 LEAGARIEIESAKKNPLDFVLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V ++EKMSKSL NFFTIR I E
Sbjct: 223 IHGGGMDLSFPHHENEIAQSEGANNCTFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ LR+F++S+HYRSPLN+S L+ A ++ +Y ++ + + T ++
Sbjct: 283 SYNCETLRYFIMSSHYRSPLNFSDDNLNKAKSSLSRLYTAIRGLNTSSTV------TEKV 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + F+ + +D NT L+ F+ A K +N L++K+ Q +L
Sbjct: 337 PMYFDYSV-----RFNEALDNDFNTPIALSILFELA-KTVN-----LQRKKDVDQANALA 385
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARK 361
+ L+K+ G Y +LQ DK LK+ L+ +V I R AR
Sbjct: 386 QLLKKL----------------GDYIGILQMDADKFLKQGISLSNSEVDVKITSRNEARA 429
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+F+ SDQIR L GI L D +T WR
Sbjct: 430 DKNFALSDQIRDKLAELGIVLEDNANDTTWR 460
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 105 LGVLRPDIEPKATENIPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + L FD
Sbjct: 165 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 225 IHGGGADLQFPHHENEIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEK 284
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 285 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 344
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 345 PAAAFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 381
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 382 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 427
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++ +SD+IR L I L D T WR
Sbjct: 428 EEIDDLIARRKQARADKNWVESDRIRDLLNEHKIILEDNAGGTTWR 473
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 224/397 (56%), Gaps = 44/397 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + ++ ++ MI +++ AY GDV++ V K YG+LSG++L
Sbjct: 101 AALNVLRPDDEPRATSNIPEMLAMIQTLLDKGLAYQGSNGDVYYDVSKFDGYGKLSGRKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGERVAVD K +P DF LWKA+K GEP+WD+PWG GRPGWHIECSAMS L
Sbjct: 161 EDMRAGERVAVDEIKDDPMDFVLWKASKPGEPAWDAPWGAGRPGWHIECSAMSQKLLGDH 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS +V+YWMHNG + N+EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSEGCTGHKHVNYWMHNGFIRVNDEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKT 239
+ Y A+R F++++HYRS LNY+ QLD+A+ ++ +Y L+ E + + E+ +
Sbjct: 281 LQHYRAEAVRFFILNSHYRSQLNYATDQLDAANASLSRLYTALRGLPEAGAANYTEYER- 339
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
F A M DD NT + F+ A
Sbjct: 340 ----------------RFDAAMDDDFNTPEAIAVMFELARD------------------- 364
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEE 355
I +R ++E L G +LQ ++ LK + L++ D+ LI++
Sbjct: 365 --INRIRTEQSEGAAAPLGALLKLLGKALGILQDNPEEWLKGSAGADGLSDADIDALIQQ 422
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AAR K++ +SD+IR +L KG+ L D T WR
Sbjct: 423 RLAARAAKNWGESDRIRDELKTKGVILEDSAGATSWR 459
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2.1|SYC_BAUCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 220/392 (56%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I + Q+I+ + AY+ GDV FA+E + NYG LS Q L
Sbjct: 103 LNILRPDKEPRATQHIKEIIQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G+RV + + KRNP DF LWK +K GEP+W SPWG GRPGWHIECSAMS YL FD
Sbjct: 163 LQIGQRVKITTVKRNPMDFVLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DLIFPHHENEIAQS + V++WMH+G VT NEKMSKSL NFFT+R + +
Sbjct: 223 IHGGGSDLIFPHHENEIAQSTCMENNPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FLIS+HYR PLNYS L A A+ +Y L++ + + P
Sbjct: 283 YYDAETVRYFLISSHYRKPLNYSEKSLQLARTALKSLYIALRNTKKEVIP---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E I ++F M++D NT FQ A +N LK K K Q +
Sbjct: 333 -SGGEYFI----EQFMMAMNNDFNTPAAHAVLFQLA-----HEVNRLKTKNIKSAQ-GMA 381
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+LR + N ILGLL P + LQ+ K L EE L+++R R
Sbjct: 382 ATLRYLAN-------ILGLLEQDPEVF---LQKQKIVTDLNIALIEE----LVKQRNNIR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K + ++D++R L GI L D + TIWR
Sbjct: 428 KKHQWVQADKVREKLAAMGIVLEDTPQGTIWR 459
>gi|349611156|ref|ZP_08890463.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348614537|gb|EGY64083.1| cysteinyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 473
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K + L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDVHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0.1|SYC_DESVM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 220/395 (55%), Gaps = 15/395 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR + H+E++ + ++I D AY GDV+F V P YG+LSG+
Sbjct: 99 MDRLNVLRADLEPRATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+++ R+G RVA K +P DFALWKAAK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 159 VDDLRSGARVAPGEEKEDPLDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL+FPHHENEIAQ+ AA V YW+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLVFPHHENEIAQTEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E Y P LR+FL++ HYRSP++++ +D A + IY+ L L +E +
Sbjct: 279 ILENYLPETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELE--REKWTS 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ + LR F M DD+NT+ L F ++ N L+ K Q K +
Sbjct: 337 GPLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGA 393
Query: 300 SLIESLRKIENEVKEVLRILGLL---PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
R + +E +LG+ P G L +L+ + R + V +L++ R
Sbjct: 394 RAF--FRAVLDEAATWFAVLGVFGREPAG----FLAELRACRVARKGIDPAKVEELLQAR 447
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR +KDF+++D IR ++ GI + D +W
Sbjct: 448 INARADKDFARADAIRDEIAALGIEVRDTPSGAVW 482
>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Kyrpidia tusciae DSM 2912]
Length = 476
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/400 (41%), Positives = 216/400 (54%), Gaps = 38/400 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P QPRV+ HM +I DMI +++ AY ++ DV+F + P+YG+LSGQ
Sbjct: 102 AALGIEPADVQPRVTMHMHEIIDMIQALLDKGFAYRIQEDVYFDTSRDPDYGKLSGQDPA 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
AG RV VD RKR+P DFALWK +K GE +WDSPWG GRPGWHIECSAMS YL
Sbjct: 162 ALMAGARVEVDERKRHPLDFALWKGSKPGEVAWDSPWGKGRPGWHIECSAMSRTYLGDTL 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIH GG DLIFPHHENEIAQS YWMHNG++ N KMSKSLGN T+R++
Sbjct: 222 DIHAGGQDLIFPHHENEIAQSECVTGHPFARYWMHNGYLQWNRVKMSKSLGNVVTVRELL 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP--------F 233
+R P A+R +L+SAHYR PLN+S+ L+ A + I +L+D L P
Sbjct: 282 KRVRPHAIRLYLLSAHYRHPLNFSLELLEQADRGLERIESSLRDLGDWLGPDSSLTGAVT 341
Query: 234 QEHGKTARINPAAE-DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+E G P E D + ++ +++ M DD NT+ L GA + + N ++
Sbjct: 342 EESGHV----PGLEVDEVQRIHEKWTEAMDDDFNTAEAL-GALYEGVGLANRAIREQDVT 396
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ K Q L R +GL+ G K +E E + L
Sbjct: 397 RAKAWQGWLSYH-----------ARFMGLIADGQ-------------KESETEREKIEAL 432
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I RA ARK +D++ +D+IR L+ GI L D WR
Sbjct: 433 IARRAEARKKRDWAAADRIRDQLSEMGIVLEDTPYGVRWR 472
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 222/392 (56%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ +I ++ ++ AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMVRPDIEPRATQHIGEIIALVETLLEKGHAYVADNGDVMFIVESYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+D +A + + + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPLAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN + K + +++
Sbjct: 342 KEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKAEDMAVA 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
L ++E+ +LG +LQQ + LK E EE ++ +LI ER AR
Sbjct: 377 AGLGA---RLRELGAVLG---------ILQQDPEAFLKGDEADEEVAEIERLIAERNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D R LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARNRLTEMGIVLEDSAGKTSWR 456
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 222/392 (56%), Gaps = 9/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L P +P+ ++++ ++ + ++I++ AY GDV+F V YG+LSG+
Sbjct: 99 MDKLGILRPNAEPKATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ R+G RVA K +P DFALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L
Sbjct: 159 VEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGM 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQS AA YW+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PIDIHGGGQDLIFPHHENEIAQSEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I RY P LR FL+S+ YRSPL+YS LD A + IY E AL+ +
Sbjct: 279 IYARYLPEVLRFFLLSSQYRSPLDYSDQGLDEAEKGIKRIYTAKVQMEQALA--RAKWSE 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
++ + +++ + F A M DDLNT+ + F L + L M K K ++
Sbjct: 337 TKLPADVTEELSRHEEGFTAAMDDDLNTAQAMGHVF--GLVRLAGRL-MEDKTLVKSRET 393
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ E LR+I ++G+ A + L +LK L R + V L+ ER A
Sbjct: 394 A--EVLRRILANFAVWAEVIGVFGTDA-AAFLAELKACRLTRLGIDATRVDALVAERQDA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RK KDF++SD IR +L G+ +MD W
Sbjct: 451 RKAKDFARSDAIRDELAVLGVTVMDTPTGPQW 482
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6.1|SYC_CHRSD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 215/389 (55%), Gaps = 35/389 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H++ I M+ ++I+ AY GDV++ V + YG+LS + L++
Sbjct: 102 LGVLRPDREPRATAHVDDIVAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDD 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV V++ K +P DF LWKAAK GE SW SPWG GRPGWHIECSAMS L FD
Sbjct: 162 MRAGSRVEVETAKEDPLDFVLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFD 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS AA V+ WMH G V + EKMSKSLGNFFTIR++ E
Sbjct: 222 IHGGGPDLVFPHHENEIAQSEAATGRPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLE 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ P +R+ L+++HYRSP+NY+ L A ++ Y LQ +
Sbjct: 282 AHAPEVVRYLLLASHYRSPINYAPDALSDARRSLERFYNALQG----------------V 325
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P A + R+ F A M DD NT+ L F + LN K++ P
Sbjct: 326 APVAGEVAAGYRERFIAAMDDDFNTAEALAVLFD-----LARELNRAKQEAPAHAPAL-- 378
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+E+KE+ +LGL + + + R ++EED+ IE RA A+K
Sbjct: 379 ------AHELKELGGVLGL-----FGQDPEGFLQAGAGRLPMSEEDIEARIEARAQAKKA 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
KDF+ +D IR +L GI L D T W
Sbjct: 428 KDFATADGIRDELAALGIVLKDGRDGTTW 456
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 229/388 (59%), Gaps = 31/388 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+E I MI+ +I AY ++GDV+++V+K +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE P E R+
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPG--PCDE---AQRLLE 347
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A++ +EF A MSDD NT+ + F A +N+ + ++ + E+
Sbjct: 348 KAKE----YEEEFEAAMSDDFNTALATSSMFGLA-----KEINIYYQAVTGREGVVCQEA 398
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+ +++ K + ++G+L + + A EE + ++ R A R K
Sbjct: 399 IAEVKRIFKFMTEVIGILE--------KAWEGNTGANAAEYEELMQVILSVRQACRDQKQ 450
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D IR L+ GI + D + W+
Sbjct: 451 WGLADCIRDRLSEIGITIEDSPQGARWK 478
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 212/362 (58%), Gaps = 29/362 (8%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L CL P PR +D+++Q+++MI ++N AY GDV+F VEK YGRLSG++L+
Sbjct: 104 NLGCLHPDEAPRATDYIDQMQNMIGHLVNKGAAYPSANGDVYFEVEKFARYGRLSGRKLD 163
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ +AG ERV VD K++P DF LWK AK EPSW SPWG GRPGWHIECSAMS L +
Sbjct: 164 DMQAGASERVDVDVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGN 223
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENEIAQS A+ + V+YWMH G + + EKMSKSLGNFFTIR
Sbjct: 224 HFDIHGGGSDLLFPHHENEIAQSEASTDEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRD 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ E++HP +R+F++S+HYRSP+N+S L A + Y A +Q+
Sbjct: 284 VMEKFHPEVIRYFIVSSHYRSPVNFSDFALKEAKTTLSRFYH-------AFKAYQQVYAD 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ E + + F+ M DD NTS + F+ I LN K++ +Q
Sbjct: 337 LSTDVLDETFVER----FNIAMRDDFNTSEAIAVLFE-----IIKELNRAVKEENAEQAT 387
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+LR + N ILGL+ + + +AL L+E D+ I++R A
Sbjct: 388 LYYSTLRHLTN-------ILGLVQYNVDEFLKSDIGQEALG---LSEADITDFIQQRVDA 437
Query: 360 RK 361
+K
Sbjct: 438 KK 439
>gi|372270883|ref|ZP_09506931.1| cysteinyl-tRNA synthetase [Marinobacterium stanieri S30]
Length = 463
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 220/394 (55%), Gaps = 42/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + HM I DM+ ++ AY GDV++ VE+ NYGRL+ + +E+
Sbjct: 103 LFVLRPDQEPRATAHMGDIIDMVQSLVEKGYAYPASNGDVYYRVERFANYGRLTNKVIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R+G RV V+ K +P DF LWKAAK GE SWDSPWG GRPGWHIECSAMS L FD
Sbjct: 163 LRSGARVEVEEAKESPLDFVLWKAAKPGEVSWDSPWGKGRPGWHIECSAMSKCCLGETFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + V YWMH G V EKMSKSLGNFFTIR + E
Sbjct: 223 IHGGGPDLPFPHHENEIAQSEAANGCTYVHYWMHAGPVRMGTEKMSKSLGNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL S HYRS ++YS L A A+ YQ LQ +
Sbjct: 283 HYDAEVVRYFLSSVHYRSYIDYSEDGLKEARSALERFYQALQ-------------AAGDL 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ-PKQQQLSL 301
+ A ++ + F A M DD NT L F+ + S LN ++Q P + L+L
Sbjct: 330 STAEGGVGSEYEERFFAAMDDDFNTPRALAVLFE-----LASELNKAVREQLPIAKPLAL 384
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK----RAELTEEDVLQLIEERA 357
E+K + ++GL LQQ D LK EL E + LI++R
Sbjct: 385 ---------ELKRLAGMIGL---------LQQDPDAFLKGEAAEGELDAEAIDSLIDKRN 426
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK+++F+++D+IR +L +GI L D + T W
Sbjct: 427 QARKDRNFAEADRIRDELLEQGIVLKDSREGTNW 460
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5.1|SYC_DESVV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 221/396 (55%), Gaps = 17/396 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ + H+ ++ + ++I AY GDV+F V P YG+LSG+
Sbjct: 99 MDRLNVLRADIEPKATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+++ R+G RVA K +P DFALWK+AK GEPSW SPWG GRPGWHIECSAMS ++
Sbjct: 159 IDDMRSGARVAPGEEKEDPLDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQ+ AA V YWMHNG V + EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLIFPHHENEIAQTEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E Y P LR FL++ HYRSP++++ +D A ++ IY+ L E G++
Sbjct: 279 ILEGYLPEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLART------ERGRS 332
Query: 240 A-RINPAAEDC---INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
P D + L F + DDLNT+ L F ++ +N L K +
Sbjct: 333 KWSATPLPADVTAEFDTLDRAFDEALEDDLNTAAALGHVFG-TIRLVNRLLED-KNLRKS 390
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ L+L+E L + + +VL + G P L LK+ ++R + V L+EE
Sbjct: 391 AETLALLERLDGLVAKWMKVLGVFGREPEA----FLSDLKECRIRRKGIDTTKVDALLEE 446
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R + R KDF+++D IR +L GI + D +W
Sbjct: 447 RKSVRAAKDFARADAIRDELAALGIEVRDTPSGAVW 482
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ +N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSEN-------------VNDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 222/385 (57%), Gaps = 26/385 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVSDHM+ I DM+ +I+ AYV+ DV++ + +YG LSG+++++ AG R+ V+
Sbjct: 121 PRVSDHMQDIIDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVN 180
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
KRNP DFALWK AK GEP W+SPWG GRPGWHIECSAMS HYL FD HGGG DLIF
Sbjct: 181 EGKRNPGDFALWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIF 240
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C C+ V+YW+HNG +T N+EKMSKSL NFF + + + Y ALR
Sbjct: 241 PHHENEIAQSEGCTGCK--FVNYWLHNGFITINSEKMSKSLNNFFLAKDVLKEYSGDALR 298
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTAR-INPAAED 248
+FL+S YR+PL+YS +LD A + + ++ E+A E +R + AAE+
Sbjct: 299 YFLLSVQYRNPLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDASRSLEKAAEE 358
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+ FH M DD NT + TGA D K IN + E++ K
Sbjct: 359 SLKA----FHEAMDDDFNTG-LATGAMFDLAKAINIYGTAVDGGLSVDH-----EAVEKA 408
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKDFSK 367
+K ++ ILG +L+++ +K + + D++ +I R ARK K +
Sbjct: 409 YTALKTIMDILG---------ILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKI 459
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L GI + D W+
Sbjct: 460 ADEIRDRLDAAGIVIEDTPTGARWK 484
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ +N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSEN-------------VNDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ +N F+A M+DD T + F+
Sbjct: 569 PAAEFDLSEN-------------VNDYTRRFYAAMNDDFGTVEAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/393 (39%), Positives = 221/393 (56%), Gaps = 22/393 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H++ I D + ++ AY V+F V K +YG+LSG +L
Sbjct: 101 MKALKVKPADIYPRVTEHIQDIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS YL
Sbjct: 161 EELVKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGES 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A V YW+H G V + EKMSKSLGNF TIR++
Sbjct: 221 FDIHGGGNDLIFPHHENEIAQSEACTGHEWVRYWLHTGFVMVSGEKMSKSLGNFVTIREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y P +R F++ HYRSPL+Y+ + A + + +Y TL++ VA+ +
Sbjct: 281 LQKYSPEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWD 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + + R +F+ M DD NT+ L F+ +++++N K K ++
Sbjct: 341 EEEFELYETVREARKKFYDAMDDDFNTAEALKAVFE-----VSNAVNRYLTKVEKPKESV 395
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAA 359
L ++L E +I+ SEV +D ++ EE +++ L+ RA
Sbjct: 396 LRKAL--------EFFKIV--------SEVFGLFEDYFKEQKAGDEEALIELLVSVRAEL 439
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK ++F+ +D+IR +L GI L D + TIW+
Sbjct: 440 RKQRNFTLADKIRDELKALGIQLEDTPQGTIWK 472
>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 465
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 224/386 (58%), Gaps = 34/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++H+ QI D I +I+ + AYV EGDV+F + + +YG+LS ++LE+ +G RV
Sbjct: 109 TLNPRATEHINQIIDFIQILIDKNAAYVSEGDVYFDINSAKDYGKLSHKKLEDLISGARV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V K+NPADFALWKA K GEP W +PWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 DVSDIKKNPADFALWKAKKEGEPYWTAPWGEGRPGWHIECSVMAKTLLGETIDIHSGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS +W+HNG +T +NEKMSKS GNFFT+R+++E ++ L
Sbjct: 229 LQFPHHENEIAQSETCNGVPFAKFWLHNGMITVDNEKMSKSKGNFFTVREVSEEFNLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL+ HYRSP+N+S ++ + + IY + + L F E+ + +
Sbjct: 289 RFFLLGCHYRSPINFSREIMEQTKNGLERIY----NAKYKLEEFLENCIDREFSDEDKKQ 344
Query: 250 INKLRDE---FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ + DE F M DD+NT+ +T A + +KFIN LN + ++L +
Sbjct: 345 LGIIADEIKFFEESMEDDINTADAIT-AIYNIVKFINIELN-----EDSNKKL-----VD 393
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+I N + + ++LG+L L+R + EE V +LI+ER ARKNKDF
Sbjct: 394 EIYNTLLRLSKVLGILE---------------LERENIDEE-VERLIKEREDARKNKDFK 437
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
++D+IR L K I + D T W+
Sbjct: 438 RADEIRDILASKNILIEDTRTGTKWK 463
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera versatilis 301]
Length = 469
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 228/411 (55%), Gaps = 64/411 (15%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L + P +P+ ++ ++ + MI+ +I AYV GDVF++V YG+LSG+ L
Sbjct: 101 AKLGIIRPDIEPKATEFIDGMIQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWG-----PGRPGWHIECSAMSAH 115
E+ RAGERV VD+ K++P DF LWK+ K EPSWDSP+G GRPGWHIECSAMS+H
Sbjct: 161 EDLRAGERVEVDTHKKDPMDFVLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSH 220
Query: 116 YLSSKFDIHGGGIDLIFPHHENEIAQSCAA-------CQDSNVSYWMHNGHVTNNNEKMS 168
+L FDIHGGG DL FPHHENEIAQS AA CQ V+YWMHNG V ++EKMS
Sbjct: 221 HLGEHFDIHGGGQDLQFPHHENEIAQSEAAHSHNGEPCQ--MVNYWMHNGFVRVDDEKMS 278
Query: 169 KSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD--- 225
KSLGNFFTIR + E+Y +R F++ AHYRSPLNYS LD A A+ +Y +L+
Sbjct: 279 KSLGNFFTIRTVLEKYDAEVVRFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVV 338
Query: 226 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 285
+VA+ Q H +AR A M DD NT + F
Sbjct: 339 ADVAIDWQQPH--SARFKEA---------------MDDDFNTPEAMAVLFD--------- 372
Query: 286 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGA----YSEVLQQLKDKALKR 341
L + K + L + L+ + +LGLL A +V QL LK
Sbjct: 373 ---LANEVNKTKSLEVAALLKSLAG-------VLGLLQRDADAFLQGDVAAQLAGTELKI 422
Query: 342 AELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
D+ QL+ +R A+K K+F+++D+IR +L GI L D T WR
Sbjct: 423 ------DIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLEDTALGTTWR 467
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/403 (44%), Positives = 232/403 (57%), Gaps = 56/403 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR + ++ Q+ D+I ++ N AY +GDV ++V P YG+LSG+ L
Sbjct: 103 AALGVQRPDHEPRATQYVPQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERV V++ KR+P DF LWKAAK EP WDSPWG GRPGWHIECSAMS+ L
Sbjct: 163 DDLRAGERVDVNTGKRDPLDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DL FPHHENEIAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GDHFDIHGGGQDLQFPHHENEIAQSEGAHQHTFVNYWMHNGFVRIDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R + ++Y P LR F++ AHYRSPLNYS LD A A+ +Y L+D P Q G
Sbjct: 283 RDVLKKYDPEVLRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKDV-----PPQAGG 337
Query: 238 KTARINPAAEDCINKLRDEFHA-----RMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
A DE HA ++DD NT + F+ A + +N S + ++ +
Sbjct: 338 LVA--------------DEAHAVRLADALNDDFNTPVAIAVLFELANE-VNRSRSPVQAR 382
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVL 350
Q +K + ILGLL PG Y LK L E ++
Sbjct: 383 Q------------------LKALAGILGLLQREPGEY------LKGGVAAAEGLGEAEIE 418
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
LI R AA+ K+F+++D+IRA+LT GI L D G T WR
Sbjct: 419 ALIAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGGLTEWR 461
>gi|430748585|ref|YP_007211493.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
gi|430732550|gb|AGA56495.1| cysteinyl-tRNA synthetase [Thermobacillus composti KWC4]
Length = 482
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 223/392 (56%), Gaps = 33/392 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV H+ QI I ++ AY GDV+F K P YG+LS Q E + G R+
Sbjct: 113 TVNPRVMHHIPQIIAFIQGLVERGYAYESGGDVYFRTLKFPEYGKLSHQNPEELQYGIRI 172
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V +K NP DFALWKAAK GE W+SPWGPGRPGWHIECSAM+ Y DIHGGG D
Sbjct: 173 EVGEKKENPQDFALWKAAKPGEIFWESPWGPGRPGWHIECSAMAREYAGDTLDIHGGGHD 232
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS + YWMHNG++ NNEKMSKSLGN T++++ +R P A+
Sbjct: 233 LQFPHHECEVAQSESFTGKPLARYWMHNGYIHINNEKMSKSLGNGITVKELLKRTKPAAV 292
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG----KTARIN-- 243
R+F++S HYRSPLN++ + A +++ I + L+ G + AR +
Sbjct: 293 RYFMLSTHYRSPLNFTDETIRQAENSIERIVNCHVNLNHRLAALGSRGAAEAEQARASGS 352
Query: 244 ---PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
P + I ++R FH +MSDD NT +T F D + N +L K++ LS
Sbjct: 353 TGEPELDQRIAEIRARFHEKMSDDFNTPDAVTALF-DLVSEANQAL--------KREVLS 403
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+R + +E++ + R+LG LPP A+L +E++ +LI ER AR
Sbjct: 404 G-AVIRVLLDEMEAMDRVLGFLPPA--------------DAAQLEDEEIERLIAERTEAR 448
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+NK+++++D+IR L +GI L D + WR
Sbjct: 449 RNKNWARADEIRDLLANRGILLEDTPQGVRWR 480
>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 466
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 219/386 (56%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H+E I I +I+ AYVV G+V+F K +YG+LS + +E +AG R+
Sbjct: 108 TVHPKATEHIEDIVKFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DF LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINEEKKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A YWMH G++ NNEKMSKS GNFFT+R+ITE+YHP L
Sbjct: 228 LIFPHHENEIAQSEALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR+P+N+S+ +D A+ A Y+ L + L K +N +
Sbjct: 288 RLFMLMAHYRNPINFSLDLMDQANSA----YERLLNAMANLKHLLTVCKERELNEEEKRI 343
Query: 250 INKLRDEFHAR---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ K + M DD NT+ ++ F+ A K N +L+ K+ + L + L
Sbjct: 344 VEKFEEYKKEFEEAMDDDFNTADAISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLS 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ ILGL Y V + ++ +E++L LIE+R ARK K++
Sbjct: 403 E----------ILGLF----YRTV----------KTDIDDEEILALIEKRQQARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L KGI L D + W+
Sbjct: 439 LADEIRDRLREKGIILEDTPEGVRWK 464
>gi|419797368|ref|ZP_14322854.1| cysteine--tRNA ligase, partial [Neisseria sicca VK64]
gi|385698247|gb|EIG28621.1| cysteine--tRNA ligase, partial [Neisseria sicca VK64]
Length = 387
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 17 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 76
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 77 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 136
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 137 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 196
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 197 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 256
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 257 PAAEFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 293
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 294 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 339
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 340 EEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNADGTTWR 385
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ +N F+A M+DD T + F+
Sbjct: 569 PAAEFDLSEN-------------VNDYTRRFYAAMNDDFGTVEAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9.1|SYC_PSYWF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/393 (40%), Positives = 228/393 (58%), Gaps = 15/393 (3%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L C P +PR ++H++++ DMI + AY GDV++AV+ YG+LS ++L
Sbjct: 124 AALGCENPDAEPRATEHIDEMLDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKL 183
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +AG RV VD+ K+NP DF LWKAAKAGEP W S WG GRPGWHIECSAMS L +
Sbjct: 184 EDLQAGSRVDVDTDKKNPFDFVLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNS 243
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + WMH G + + EKMSKSLGNFFTIR++
Sbjct: 244 FDIHGGGHDLQFPHHENEIAQSEAATGCTYAHNWMHVGFINVDGEKMSKSLGNFFTIREV 303
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+++HP +R F++S+HYRS +N+S L A + IYQ L+ + L+ ++
Sbjct: 304 MQKFHPETIRFFILSSHYRSQVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAES- 362
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I + +F A M+DD NT ++ F + +N L + +
Sbjct: 363 -IESINAEHAGTHSADFIAAMNDDFNTPQAISVLFS-----LAKEVNKLARDADDADTQA 416
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQ-QLKDKALKRAELTEEDVLQLIEERAAA 359
++ + +L I G L P +E LQ Q+ + A ++++E + LI+ER +
Sbjct: 417 QLQLQAVQLRALAGILNI-GQLNP---AEFLQAQIGEVA--EDQMSDEQIEALIQERLDS 470
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ NK+F+++D+IR L GI L D T WR
Sbjct: 471 KANKNFARADEIRDLLQNSGIELEDGKLGTTWR 503
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 222/408 (54%), Gaps = 58/408 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAEL 344
L + K L L+ + I+GLL P A+ L+ A L
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDPTAF------LQGGAASDG-L 423
Query: 345 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 424 SNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|422875372|ref|ZP_16921857.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
gi|380303641|gb|EIA15940.1| cysteinyl-tRNA synthetase [Clostridium perfringens F262]
Length = 466
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 224/385 (58%), Gaps = 31/385 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF--QEHGKTARINPAAE 247
R ++SAHYR LN+S L+SA +V IY + + E + +E + ++
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKVYL--- 345
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI L
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELIREL-- 402
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
GA + Q+ L EE++ LI +R ARK++DF+
Sbjct: 403 -----------------GAPLGMFQKSTKGNL------EEEIEALIAKRQQARKDRDFAL 439
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR +L +GI L D + W+
Sbjct: 440 ADKIRDELKDRGIVLEDTPQGVRWK 464
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 224/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 105 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 165 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 225 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 284
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 285 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN- 343
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
+P E G + N F+A M+DD T + F+
Sbjct: 344 ----TPAAEFGLSENANDYTR--------RFYAAMNDDFGTVEAVAVLFE---------- 381
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 382 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 427
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 428 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 473
>gi|333908247|ref|YP_004481833.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
gi|333478253|gb|AEF54914.1| cysteinyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
Length = 460
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 222/384 (57%), Gaps = 35/384 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P+ ++ M+QI DM+ +I+ AY GDV++ YG+L+ ++LE+ AG
Sbjct: 108 PDREPKATEFMQQIIDMVQVLIDKGFAYQGTSGDVYYRATAFKEYGKLNNRKLEDMLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ V++ K +PADF LWK AK GE +W+SPWG GRPGWHIECSAMS + L S FDIHGGG
Sbjct: 168 RIDVETAKEHPADFVLWKQAKVGEVAWESPWGLGRPGWHIECSAMSTNCLGSHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS AA V+YWMH G V NNEKMSKSLGNFFT+R + E+Y+P
Sbjct: 228 PDLKFPHHENEIAQSEAATGKDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+ ++S+ YRSP++YS L+ A A+ +Y L+ VA + TAR
Sbjct: 288 VVRYLMVSSQYRSPIDYSDQSLNEAKVALERLYTALRQQSVA-EEWVASEYTAR------ 340
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT ++ F+ + LN K ++ +
Sbjct: 341 ---------FEEAMQDDFNTPVAVSVLFE-----LVRELNKAKAEESDKAA--------N 378
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ E+K + +LGLL +V + + A L E + LI+ER ARK+K+F++
Sbjct: 379 LAAELKSLASLLGLL-----DQVPEYFLQNSTITAGLDESAIQALIDERTQARKDKNFAR 433
Query: 368 SDQIRADLTRKGIALMDMGKETIW 391
SD+IR L +GI L+D + T W
Sbjct: 434 SDEIRDQLADQGIELLDSREGTTW 457
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVQKLIQRRHAYVADNGDVMFDVESFKGYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM+ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNGKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLS 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DTFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R A
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSNEDEVAKIEALIKQRNEA 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT GI L D T WR
Sbjct: 435 RAAKDWAVADAARNALTEMGIVLEDGPNGTTWR 467
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 219/406 (53%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|341926027|dbj|BAK53927.1| cysteinyl-tRNA synthetase [Chitiniphilus shinanonensis]
Length = 459
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 222/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR ++ + + MI ++I+N AY GDV++AV K YG+LSG+ L++
Sbjct: 103 LGVLRPDHEPRATEFVGAMHQMIGRLIDNGLAYSAPNGDVYYAVRKFDGYGKLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERV VD K++P DF LWKAAKA EP+ WDSPWG GRPGWHIECSAMS H+L +
Sbjct: 163 LRAGERVDVDPNKQDPLDFVLWKAAKADEPADAKWDSPWGAGRPGWHIECSAMSCHHLGA 222
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A V+YWMHNG + +NEKMSKSLGNFFTIR+
Sbjct: 223 HFDIHGGGADLQFPHHENEIAQSEGASGQRYVNYWMHNGFIRVDNEKMSKSLGNFFTIRE 282
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ ++Y +R F++ AHYRSPLNYS + LD A +A+ +Y L K
Sbjct: 283 VLKKYDAEVVRFFILRAHYRSPLNYSDMHLDDARNALTRLYTAL--------------KA 328
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ D + F A M DD NT+ + F L + +QQ
Sbjct: 329 VPADAVTLDWQSPYAARFKAAMDDDFNTTEAVAVLFD------------LAHEANRQQSP 376
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L L+ + VL +LG P Q + E + E + I R AA
Sbjct: 377 ALAGELKALAG----VLGLLGREP--------QAFLQAEVGEGEWSAERIEAAIAARKAA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R K++++SD+IR +L G+ L D + T WR
Sbjct: 425 RAAKNWAESDRIRDELAAAGVVLEDGAQGTGWR 457
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ + L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ + L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 230/396 (58%), Gaps = 44/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++ M +I M+ +I AY + GDV++ V K YG+LSG+++++
Sbjct: 103 LGVLRPDLEPKATESMPEILAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGER+AV+ K +P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMSAH L FD
Sbjct: 163 LRAGERIAVNEAKTDPLDFVLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A +V+YWMHNG V ++EKMSKSLGNFFT+R++
Sbjct: 223 IHGGGQDLQFPHHENEIAQSEGAHDCQSVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y A+R+F++S+HYRSPLNY+ QL+ A A+ Y +L+D E
Sbjct: 283 QYPAEAVRYFILSSHYRSPLNYAEDQLEQAKAALTRFYTSLRDVE--------------- 327
Query: 243 NPAAEDCINKLRD-EFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
P E +N D EF +R M DD NT+ L+ + + +LN +
Sbjct: 328 -PQPE--LNWQDDKEFGSRFAEAMDDDFNTALALS-----VMADVRQALNKALENNEADL 379
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEER 356
L L + +LGL A + ++ + AE ++ D + LI ER
Sbjct: 380 AAYLAGLLLSFGD-------VLGLFQQDAETFLVGDM-------AEDSDADAIDALIVER 425
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +K++S++D IR L+ GI + D +T WR
Sbjct: 426 NQARADKNWSRADDIRDQLSEMGIVIEDAAGKTSWR 461
>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 436
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 230/395 (58%), Gaps = 41/395 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L PT +P +D++ I MI ++++ AY + GDV+F+VE +YG+LS ++L
Sbjct: 77 AKLGVLSPTEEPCATDYINDIVAMIHKLVSGGHAYAADNGDVYFSVESYSDYGKLSKKKL 136
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+PADF LWKAAK GE SW SPWG GRPGWHIECSAMS L
Sbjct: 137 EDLVAGARVDVQEAKRSPADFVLWKAAKEGEVSWPSPWGDGRPGWHIECSAMSNRCLGET 196
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + V+ WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 197 FDIHGGGPDLLFPHHENEIAQSECANGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREI 256
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y P +R+FL+S+HYRS ++YS L A + +Y L+ L P + +T
Sbjct: 257 FEKYAPEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTRLYHALR----GLVPAKNVAETE 312
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE M DD NT+ GA L + + +N+ +++ +
Sbjct: 313 HDQRFAE------------AMDDDFNTA----GATA-VLHAVANEINLHRREGRDE---- 351
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
K + ++R+ G+L +LQQ + +A EL+ +D+ +I+ RA
Sbjct: 352 ------KANEQAAVLVRLGGVLG------LLQQDPEAFFQADTGGELSADDIAAMIQARA 399
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK KDF+++D+IR +L KG+ L D + T WR
Sbjct: 400 DARKQKDFAEADRIRDELADKGVILDDSREGTSWR 434
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 223/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ +N F+A M+DD T + F+
Sbjct: 343 PAAKFDLFEN-------------VNDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 226/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL +E LQ + L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 466
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 219/386 (56%), Gaps = 32/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++H+E I + I +I+ AYVV G+V+F K YG+LS + +E +AG R+
Sbjct: 108 TVHPKATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DF LWKA K GEP+WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EINEEKKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A YWMH G++ NNEKMSKS GNFFT+R+ITE+YHP L
Sbjct: 228 LIFPHHENEIAQSEALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITEKYHPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ AHYR+P+N+S+ +D A+ A Y+ L + L K +N +
Sbjct: 288 RLFMLIAHYRNPINFSLDLMDQANSA----YERLLNAVANLKHLFTVCKERELNEEEKRI 343
Query: 250 INKLRDEFHAR---MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ K + M DD NT+ ++ F+ A K N +L+ K+ + L + L
Sbjct: 344 VEKFEEYKKEFEEAMDDDFNTADAISVLFEMA-KTANINLSGNSSKELVKYILDMFLKLS 402
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ ILGL Y V + ++ +E++L LIE+R ARK K++
Sbjct: 403 E----------ILGLF----YRSV----------KTDIDDEEILALIEKRQQARKEKNWK 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L KGI L D + W+
Sbjct: 439 LADEIRDRLREKGIILEDTPEGVRWK 464
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 226/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL +E LQ + L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ + L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|373468293|ref|ZP_09559550.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371766384|gb|EHO54639.1| cysteine--tRNA ligase [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 469
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 230/399 (57%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
MA + LP T P + + ++DMI ++I + AYV +G V+F V+ +YG+LS +
Sbjct: 99 MAAMNVLPATKNPLATQEIGGMEDMIGELIESGHAYVAKDGTVYFRVKSFKDYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP WDSPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFREIKVTGEDGKEDSNDFVLWKPKKDGEPFWDSPWSKGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKS GNFFT
Sbjct: 219 LGDQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S +++A +++ I + + + A+ +
Sbjct: 279 VRDISEKYDLQVLRFFMLSAHYRSPLNFSADLMEAAKNSLERILTGVDNIKSAI----QR 334
Query: 237 GKTARINPAA---EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
A I+ A + L+D+F A M DD NT+ ++ F+ +K N++LN +
Sbjct: 335 DNKAPISDAELSNLEIAKVLKDKFVAAMDDDFNTADAISAIFE-LIKLSNTTLNETSTAE 393
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ L +IE L +LG++ ++AE+ + ++ LI
Sbjct: 394 YAKGLLKVIEPL----------CDVLGIITE---------------RKAEILDSEIEDLI 428
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E+R ARKNKDF+ +D+IR DL KGI L D + W+
Sbjct: 429 EQRTQARKNKDFALADKIRNDLLEKGIVLEDTREGVKWK 467
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3.1|SYC_MOOTA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 217/388 (55%), Gaps = 26/388 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRVS H++ I I ++ AYV +GDV+F VEK P YGRLS + RAG RV
Sbjct: 108 TLYPRVSQHIDAIIAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARV 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V++ KRNP DFALWKAA GEPSW+SPWGPGRPGWHIECS M+ YL FDIHGGG D
Sbjct: 168 EVNTSKRNPLDFALWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGAD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQ+ A + +W+HNG +T N EKMSKS GNFF +R I +R+ PLA+
Sbjct: 228 LIFPHHENEIAQAEAQTGCTFARFWLHNGFITVNQEKMSKSKGNFFLVRDILKRFRPLAV 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R +L++ HYRSP+++ L +A + + T + A G + PA
Sbjct: 288 RLYLLATHYRSPIDFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTV-PARTSA 346
Query: 250 I----NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
+ +LR EF + M DD NT+ L A D + INS LN P + + I
Sbjct: 347 LAGRAEELRQEFISAMDDDFNTARAL-AALYDLAREINSYLNGTTTIDPAALRTAAI--- 402
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI-EERAAARKNKD 364
E EVL G + + QQ+ D+ L ++ LI + R AR+ +D
Sbjct: 403 -TFEQLGGEVL--------GLFGQARQQVDDELLS-------GLMDLILQVRQEARQRRD 446
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI L D + W+
Sbjct: 447 WATADTIRDRLKELGIVLEDTPRGPRWK 474
>gi|374289282|ref|YP_005036367.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 487
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 221/386 (57%), Gaps = 8/386 (2%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T+ P+V++ M++I + + +I ND AY ++G+VF+A++ +YG+LS + L+ AG+RV
Sbjct: 110 THNPKVTEFMDEIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRV 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VDSRKRNP DF LWK +K GEP W SPWG GRPGWHIECSAM L DIHGGGID
Sbjct: 170 EVDSRKRNPYDFVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGID 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQ +YWMHN + +EKMSKSLGN T R ++YHP L
Sbjct: 230 LIFPHHENEIAQGEGCNCTKYCNYWMHNEFINLKDEKMSKSLGNVITGRAFMDQYHPEVL 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
+ ++SAHYRS N + ++ + +Y+TL + L F E ++ ++N +
Sbjct: 290 KFLMLSAHYRSNFNVTDEKIHQVISGLRRVYETLATVDTILDTF-EKSESGKVNKNFQTT 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + + DD +T+ ++ F+ F + LN+LKKK + ++ + + +
Sbjct: 349 LTNSDAKIKKSLDDDFSTAEVVATIFEVVRTF--NGLNLLKKK----KDVNSWTTAKAFK 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ ++ +++ L + L + D +K L E +L+L++ R AR+NKD+ K+D
Sbjct: 403 DWIQRYGQMMALFQEEP-VQFLSSIDDIMIKEKNLDREKILELVKMREEARENKDWDKAD 461
Query: 370 QIRADLTRKGIALMDMGKETIWRPCV 395
+ R L GI D + W V
Sbjct: 462 EARDALHAMGIDFSDTPEGVKWNVKV 487
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ + L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|386742349|ref|YP_006215528.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479042|gb|AFH92837.1| cysteinyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 462
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 220/392 (56%), Gaps = 37/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I ++ +I AYV + GDV F V+ NYG+LS Q LE
Sbjct: 103 LNILRPDSEPRATQHIDEIIEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADSKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNY+ L A A+ +Y L+ G +
Sbjct: 283 YYDPETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALR------------GTDKSV 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + K F M+DD NT + F A +N LK +
Sbjct: 331 APAGGEIFKK---RFEDAMNDDFNTPEAYSVLFDMA-----REINRLKSENKV------- 375
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ ++ +E++++ +LGLL P A+ L+ A + + LI++R AR
Sbjct: 376 -AANELASELRKLAGVLGLLEQDPEAF------LQGNAQGEGDEEVAKIEALIKQRNDAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNK+++ +D R +LT GI L D + T WR
Sbjct: 429 KNKEWALADAARDELTAMGIVLEDGAQGTTWR 460
>gi|338999452|ref|ZP_08638095.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
gi|338763601|gb|EGP18590.1| cysteinyl-tRNA synthetase [Halomonas sp. TD01]
Length = 463
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 215/396 (54%), Gaps = 43/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L LPP+++PR + H+ I MI +I D AY GDV++ V K +YG+L+ ++L
Sbjct: 100 ARLSVLPPSHEPRATGHIGDIVAMIQTLIEKDFAYAAANGDVYYRVRKFADYGKLNNRQL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ R+G RV VD K +P DF LWKAAK GE W SPWG GRPGWHIECSAMS L
Sbjct: 160 DDMRSGARVEVDVHKEDPLDFVLWKAAKPGEAHWHSPWGNGRPGWHIECSAMSTCCLGDT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR +
Sbjct: 220 FDIHGGGPDLTFPHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDV 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGKT 239
+ P +R L+++HYRSP+NYSV L A ++ Y L+ EV + E G
Sbjct: 280 LAEHDPEVVRFLLVASHYRSPINYSVDSLHEARKSLTRFYTALEGVEVLSGGGGDETGYA 339
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
R A M DD N+ L F + LN K
Sbjct: 340 ERFTTA---------------MDDDFNSPEALAVLFD-----LARDLNRAKS-------- 371
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK----RAELTEEDVLQLIEE 355
ES K ++ E+ R+ G+L +LQQ LK + L+E ++ I +
Sbjct: 372 ---ESSEKAQHLASELTRLAGVLG------LLQQNPQTFLKGNQQQVALSEAEIEAKIAQ 422
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R A+ NKDF+++D IR +L GI L D + T W
Sbjct: 423 RKEAKANKDFAQADAIRDELASMGIILKDSREGTTW 458
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 222/394 (56%), Gaps = 44/394 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I+N AYV +GDV F VE YG LS Q LE
Sbjct: 113 LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +KAGEPSW+SPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLG 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF-QEHGKTAR 241
Y +LR+F ++AHYRS L+YS+ LD A A+ +Y L+ C+V+ EH A
Sbjct: 293 LYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEA- 351
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLS 300
F M DD NT L F+ I LN LK + K L+
Sbjct: 352 ---------------FKTAMDDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLA 391
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAA 358
+ +KE+ +LGL L+Q D LK +E ++ LI++R
Sbjct: 392 V---------RLKELAGVLGL---------LEQDPDAFLKGDANDDETAEIEALIKQRNE 433
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ K+++ +D++R L I L D TIWR
Sbjct: 434 AKAAKNWAVADEVRDKLKAINIVLEDTPNGTIWR 467
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 209/392 (53%), Gaps = 48/392 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L CLPP +PR +D + + +I +I AY + GDV++AV P YG+L+ + L
Sbjct: 103 AALGCLPPDEEPRATDAVPGMIALIETLIKKGHAYAADNGDVYYAVRSFPGYGKLANRSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGER+AV+ K +P DF LWKAAK GEPSWDSPWG GRPGWHIECS MSA L
Sbjct: 163 DDLRAGERIAVNEAKNDPLDFVLWKAAKPGEPSWDSPWGQGRPGWHIECSVMSAAALGEH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL FPHHE EIAQS AC +V+YW+HNG V N+EKMSKSLGNFFT+R +
Sbjct: 223 FDIHGGGMDLKFPHHECEIAQSEGACGHQHVNYWLHNGFVQINDEKMSKSLGNFFTVRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y LR F++ +HYR PLNYS L A + +Y L P TA
Sbjct: 283 LKHYDGETLRTFILGSHYRGPLNYSDTALAEAKKMLTRLYTALDK-----QPLDGALDTA 337
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ F M+DD+NT F D + INS
Sbjct: 338 AVAA------------FEEAMNDDINTPKAFAVLF-DLARRINSG--------------- 369
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK-RAELTEEDVLQLIEERAAA 359
+ + L+ L G +LQQ LK L E + I ER AA
Sbjct: 370 --------DAHLAATLKTL-----GGRLGILQQAPAVFLKGEGSLDEATITARIAERNAA 416
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+ KD++++D IR +L +GI L D T W
Sbjct: 417 KAAKDYARADAIRNELAAQGIILKDTAGGTEW 448
>gi|385331930|ref|YP_005885881.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [Marinobacter adhaerens HP15]
Length = 462
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 231/395 (58%), Gaps = 39/395 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + ++++I MI ++I AY + GDV+FAV+ +YG+LS ++L
Sbjct: 101 ARLGVLSPDEEPRATAYIDEIIAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+PADFALWKAAKAGE SW SPWG GRPGWHIECSAMS L
Sbjct: 161 EDLLAGARVDVQEAKRSPADFALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + V+ WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 221 FDIHGGGPDLLFPHHENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R+FL+S+HYRS ++YS L A + +Y L+ + P K A
Sbjct: 281 MEKYPAEVVRYFLVSSHYRSQVDYSEENLAEAGRTLTRLYHALR----GIVP----AKAA 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + D + F M DD NT+ A+ +++ N + + + +
Sbjct: 333 DVPESEHD------ERFAEAMDDDFNTA--------GAIAVLHAVANEINQHRRDGR--- 375
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
E++ K+ IL L G +LQQ + +A EL+ ED+ +I+ RA
Sbjct: 376 --------EDDAKQSAAILVRL--GGVLGLLQQDPEAFFQADTGGELSAEDIEAMIQARA 425
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+F+++D+IR +L KGI L D + T WR
Sbjct: 426 DARKAKNFAEADRIRDELLEKGIILDDSREGTTWR 460
>gi|342904069|ref|ZP_08725871.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|342904629|ref|ZP_08726428.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341953050|gb|EGT79564.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
gi|341954078|gb|EGT80572.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21621]
Length = 459
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + I
Sbjct: 334 --GGENFVETFRES----MDDDFNTPNALSVLFEMA-----REINKLKTED--------I 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 VAKDWSAADAARNELTAMGIVLEDGPNGTTWR 457
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 227/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL + + L+ A+ L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTAGGTTWR 471
>gi|350566003|ref|ZP_08934716.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
gi|348663210|gb|EGY79810.1| cysteine--tRNA ligase [Peptoniphilus indolicus ATCC 29427]
Length = 464
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 223/386 (57%), Gaps = 35/386 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++H+++I D I ++ AY +GDV+F VE YG+LS ++LE+ +G RV
Sbjct: 109 TMNPRATEHIQEIIDFIAGLVEKGAAYESDGDVYFKVESFTEYGKLSHKKLEDLISGARV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+ S K NPADFALWK K GEP W+SPW GRPGWHIECS M+ L DIH GG D
Sbjct: 169 DISSLKENPADFALWKKKKEGEPYWESPWSEGRPGWHIECSVMAKSLLGDTIDIHSGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS + +YW+HNG +T +NEKMSKS GNFFT+R++ E + L
Sbjct: 229 LQFPHHENEIAQSETLNEKPFANYWLHNGMITVDNEKMSKSKGNFFTVREVAEEFDLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL+S+HYRSP+N+S + +++ IY L E K ++ +
Sbjct: 289 RFFLLSSHYRSPINFSRDVMVQTKNSLERIYNGRD----KLVDLLEVTKEVELSDKDREF 344
Query: 250 INKLRDE---FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+N + +E F M +D+NT+ +T F + +K IN+ LN + K+ S ++L
Sbjct: 345 LNSIEEEVKFFETSMENDINTADAITAVF-NIVKKINTGLN---ENSNKKIVSSTFDTLL 400
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
K+ ++LG+L E+ Q+ T+ +V +LIEER ARKNKDF+
Sbjct: 401 KL-------TKVLGIL------EMSQE-----------TDIEVERLIEERVQARKNKDFN 436
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
++D+IR +L G+ + D T W+
Sbjct: 437 RADEIRQELLDMGVVIEDTRAGTKWK 462
>gi|417842975|ref|ZP_12489052.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
gi|341950209|gb|EGT76798.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21127]
Length = 459
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVATFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSDDDEVAKIETLIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 AAKDWSAADAARNELTAMGIVLEDGANGTTWR 457
>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 465
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 223/386 (57%), Gaps = 34/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++H+++I D I +I+ AYV GDV+F + + +YG+LS + LE+ +G RV
Sbjct: 109 TINPRATEHIDEIIDFIQTLIDKGAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K+NP DFALWK K GEP W +PWG GRPGWHIECS M+ + DIH GG D
Sbjct: 169 DVNDNKKNPQDFALWKNKKEGEPYWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS +YW+HNG +T +NEKMSKS GNFFT+R+I+E + L
Sbjct: 229 LQFPHHENEIAQSETCNGVPFANYWLHNGMITVDNEKMSKSKGNFFTVREISEEFDLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL++ YRSP+N+S ++ ++ +Y E A+ E ++ E+
Sbjct: 289 RFFLLTTQYRSPINFSREVMEQTKNSSKRLYNAKYKLEDAI----EKTSVEKMTEEEENL 344
Query: 250 I---NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+ +K ++F M DDLNT+ +T F D +K IN +L+ K+ ++ L L++ L
Sbjct: 345 LKGYDKHIEKFEKAMEDDLNTADAITAIF-DLVKDINLNLDENSSKEVLEKSLELLKKLT 403
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
K +LG++ +R E++ D+ +LI+ER ARKNKDF+
Sbjct: 404 K----------VLGIMEE---------------EREEIS-GDIEELIKERNEARKNKDFT 437
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
++D+IR +L GI + D T W+
Sbjct: 438 RADEIRDELKNMGIEIEDTRSGTTWK 463
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| cysteine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 494
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 220/392 (56%), Gaps = 37/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I ++ +I AYV + GDV F V+ NYG+LS Q LE
Sbjct: 135 LNILRPDSEPRATQHIDEIIEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQ 194
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 195 LQAGARVEVADSKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFD 254
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 255 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 314
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNY+ L A A+ +Y L+ G +
Sbjct: 315 YYDPETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALR------------GTDKSV 362
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + K F M+DD NT + F A +N LK +
Sbjct: 363 APAGGEIFKK---RFEDAMNDDFNTPEAYSVLFDMA-----REINRLKSENKV------- 407
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ ++ +E++++ +LGLL P A+ L+ A + + LI++R AR
Sbjct: 408 -AANELASELRKLAGVLGLLEQDPEAF------LQGNAQGEGDEEVAKIEALIKQRNNAR 460
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNK+++ +D R +LT GI L D + T WR
Sbjct: 461 KNKEWALADAARDELTAMGIVLEDGAQGTTWR 492
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/408 (40%), Positives = 222/408 (54%), Gaps = 58/408 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDTHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 569 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAEL 344
L + K L L+ + I+GLL P A+ L+ A L
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDPTAF------LQGGAASDG-L 649
Query: 345 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 650 SNEEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 105 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 165 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 225 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 284
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 285 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 344
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 345 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 381
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL ++ L+ A+ L+
Sbjct: 382 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSN 427
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 428 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDSAGGTTWR 473
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 113 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 173 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 233 IHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 292
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 293 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 352
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 353 PAAEFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 389
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 390 --LAGEVNKTNDAYLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 435
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 436 EEIEDLIAQRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 481
>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|229558625|sp|B2TIF6.1|SYC_CLOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 470
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 227/398 (57%), Gaps = 41/398 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
LQ T PR ++++E I D + Q+I AY VEGDV+F +K +YG+LSGQ +E+
Sbjct: 102 LQIERATVNPRATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDL 161
Query: 64 RAG--ERVA--VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+ G R + D RK +P DFA+WKA K GEP+W PWG GRPGWHIECS M+ L
Sbjct: 162 QMGASNRTSSIADERKNDPMDFAIWKAQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGD 221
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIH GG+DL FPHHENE+AQS A +YWMH+ +V NN+KMSKSL NFFT R
Sbjct: 222 TIDIHAGGMDLTFPHHENEVAQSEALTGMRFANYWMHSAYVNINNQKMSKSLNNFFTARD 281
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I + Y +R F++SAHYR +N+S LDSA +V +Y + + E + +
Sbjct: 282 ILKEYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLID------EV 335
Query: 240 ARINPAAEDC-----INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+R N + E+ + K R+++ +M DD NT+ LT F+ K N+++N+ K+
Sbjct: 336 SRENISEEEVNYLNSLKKYREKYIEKMDDDFNTADALTVLFE-LTKDTNTNINVNSSKEL 394
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
+ L+LI L GA +LQ++ +L E+++ LI+
Sbjct: 395 VNKALNLIREL-------------------GAPLGLLQKITKGSL------EDEIESLIQ 429
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+R ARKNKDF+ SD+IR DL +GI L D + W+
Sbjct: 430 QRQDARKNKDFALSDKIRDDLKDRGIVLEDTPQGVRWK 467
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVATFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 VAKDWSAADSARNELTAMGIVLEDGANGTTWR 457
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/391 (43%), Positives = 219/391 (56%), Gaps = 41/391 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +P+ + + I +MI +I + AYV GDVF+AV + YG+LSG+ +E+
Sbjct: 117 LAVLPPDIEPKATQSIADIINMIAALIGREYAYVGANGDVFYAVNRFQGYGKLSGKNIED 176
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AGERV VD+ KR+P DF LWK AK GEP W+SPWG GRPGWHIECSAMS L + FD
Sbjct: 177 LNAGERVDVDNAKRDPLDFVLWKMAKPGEPYWESPWGHGRPGWHIECSAMSTCCLGNHFD 236
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+YWMHNG V N EKMSKSLGNFFT+R + +
Sbjct: 237 IHGGGMDLQFPHHENEIAQSEGATGEPFVNYWMHNGFVRVNEEKMSKSLGNFFTVRDVLK 296
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y P +R F++S+HYRSPLNYS QLD A A+ +Y L+ ++ I
Sbjct: 297 QYRPEVIRFFILSSHYRSPLNYSDEQLDDAGVALTRLYTALRGVDIV---------DVEI 347
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + F M DD NT L F + LN K L +
Sbjct: 348 DA-------DYKQRFEQAMDDDFNTPVALAVLFD-----LARELNKADDKTVLAATLKQL 395
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L + + + G L GA SE L E + QLI R AA+ N
Sbjct: 396 AGLLGLLQDDPD-----GFLKGGAGSE-------------SLAEAAIEQLIAARKAAKAN 437
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
KD++++D IR L +GI L D+ G TIWR
Sbjct: 438 KDWAQADAIRDQLKGQGIVLEDVAGGNTIWR 468
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 224/392 (57%), Gaps = 37/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV + GDV F V+ PNYG LS Q L+
Sbjct: 103 LNILRPDSEPRATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L S FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A + V+YWMH+G V + EKMSKSL NFFTIR + +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHEGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y +L+ + +++P AR
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARF 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M+DD NT + F I +N LK + +
Sbjct: 343 CEA---------------MNDDFNTPEAYSVLFD-----IAREINRLKTED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + +++E+ ++LGLL P A+ + Q +D AE+ + + LI++R AR
Sbjct: 375 AAANGMAAQLRELAKVLGLLEQEPEAFLQGGAQGEDD----AEVAK--IEALIKQRNDAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++KD++ +DQ R LT G+ L D T WR
Sbjct: 429 QSKDWALADQARDALTAMGVVLEDSSAGTTWR 460
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDSAGGTTWR 471
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 227/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 113 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 173 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 233 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 292
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 293 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 352
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 353 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 398
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL + + L+ A+ L+
Sbjct: 399 NA------------------QLAGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSN 435
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 436 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTAGGTTWR 481
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 219/383 (57%), Gaps = 27/383 (7%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PRVSDHM +I +MI ++ AY V+G+V++ V+ +YG+LS Q +++ ++G R+ V
Sbjct: 110 HPRVSDHMPEIIEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDV 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+ KR+P DFALWK K GEP W+SPWG GRPGWHIECSAMS +L DIHGGG DLI
Sbjct: 170 NDEKRSPLDFALWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS +C +YW+HNG++ NNEKMSKS GNFFT+R I + Y +R
Sbjct: 230 FPHHENEIAQSEGSCGCKFANYWVHNGYININNEKMSKSKGNFFTVRDIAKHYDLEVVRM 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
F++ AHYRSP+N+S L A +A+ +Y E L + + D +
Sbjct: 290 FMLMAHYRSPVNFSDELLGQAQNALERLYNAKYQMEYLLENNKSEAASED-EKTWMDNLA 348
Query: 252 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 311
+ + F M+DDLNT+ + F+ ++ NS+L+ ++ + L L
Sbjct: 349 QYKKGFIDAMNDDLNTADAIAAIFE-LVRDTNSNLSEASSREAVKAALDLF--------- 398
Query: 312 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 371
KE+ ++GL A ++ E +V LI +R ARKNKDFS +D+I
Sbjct: 399 -KELTGVIGL---------------AAKEKETDLEAEVEALIAQRQEARKNKDFSLADEI 442
Query: 372 RADLTRKGIALMDMGKETIWRPC 394
R L KGI L D + W+
Sbjct: 443 RDALLAKGIILEDTREGVKWKKA 465
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKVLGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILEDNADGTTWR 471
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 214/395 (54%), Gaps = 50/395 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L C P +PR + + + +++ +I AY + GDV++AV P YG+L+ + L
Sbjct: 123 AALGCQRPDVEPRATAAVSGMIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSL 182
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAGER+AV+ K++P DF LWKAAK GEP+WDSPWG GRPGWHIECS M A L
Sbjct: 183 DDLRAGERIAVNEAKKDPLDFVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEH 242
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL FPHHE EIAQS AC +V+YW+HNG V +NEKMSKSLGNFFT+R +
Sbjct: 243 FDIHGGGMDLKFPHHECEIAQSEGACGHPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDV 302
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++Y LR F++S+HYR PLNYS LD A A+ +Y L
Sbjct: 303 LKKYDGETLRAFILSSHYRGPLNYSDAALDEAKKALTRLYSALDKA-------------- 348
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA F M+DD NT F D + +NS + +
Sbjct: 349 ---PADGAMDADAVAAFDEAMNDDFNTPKAFAVLF-DLARRLNSG------------ETA 392
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERA 357
L +L+ + LGL LQQ LK L+E D+L I RA
Sbjct: 393 LAATLKTLSGR-------LGL---------LQQNPADWLKGENSGSLSEADILARIHARA 436
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ KD++++D IRA+L +GI + D WR
Sbjct: 437 EAKAAKDYARADAIRAELAAQGIIIKDTAGGVEWR 471
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 219/406 (53%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 569 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 225/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL +E LQ + L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQRDP-TEFLQ----GGVASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 106 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 165
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 166 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 225
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 226 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 285
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 286 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 346 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 382
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL ++ L+ A+ L+
Sbjct: 383 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSN 428
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 429 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDSAGGTTWR 474
>gi|392392061|ref|YP_006428663.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523139|gb|AFL98869.1| cysteinyl-tRNA synthetase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 477
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 216/395 (54%), Gaps = 31/395 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L +P + P+ +DH+ ++ ++I + AY VEGDV+FAV+K YG+LSG+ LE+
Sbjct: 104 LNLMPASIHPKATDHIPEMIEIIKGLEEQGLAYAVEGDVYFAVDKLSAYGKLSGRTLEDM 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV V RKRNP DFALWK AK GEP W+SPWG GRPGWHIECSAMS YL S FDI
Sbjct: 164 QAGARVEVGERKRNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQS + YWMHN +T N +KMSKSLGNFFT+R+I E
Sbjct: 224 HGGGGDLVFPHHENEIAQSEGYLHGETFARYWMHNAFLTFNQQKMSKSLGNFFTVREILE 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R +L+ HYRSPL++ L A + + +++ + AL + A
Sbjct: 284 HFPGEVIRFYLLGTHYRSPLDFDDENLRMAQKGLERLQTSIRLADEALGRKGQACADAAA 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ D + R EF M DD N++ F+ + +N + P
Sbjct: 344 DEKLRDAAEEARKEFEEAMDDDFNSALAYASLFE-----LGKVINAHVQAYPYSS----- 393
Query: 303 ESLRKIENEVKEVLRILG--LLPPG----AYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
E L K + ++ +LG L P A +E L+Q+ D L+E R
Sbjct: 394 EGLLKARGTLWKLADVLGFDLANPANKVEAGNEKLEQVMD--------------LLLEVR 439
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A ARK KD+ SD IR L GI L D + W
Sbjct: 440 AIARKKKDWEMSDLIRDRLKDLGIVLEDTPQGARW 474
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 227/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL + + L+ A+ L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDTAGGTTWR 471
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 106 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 165
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 166 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 225
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 226 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEK 285
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 286 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 346 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 382
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL ++ L+ A+ L+
Sbjct: 383 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RNPIEFLQGGAVSDG-LSN 428
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 429 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDSAGGTTWR 474
>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 466
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 221/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+NK ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI
Sbjct: 348 LNKYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELI------- 399
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
R LG P G + + + L EE + LI +R ARK++DF+ +D
Sbjct: 400 -------RELG-APLGMFQKS---------TKGNLAEE-IEALIAKRQQARKDRDFALAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIILEDTPQGVRWK 464
>gi|345021352|ref|ZP_08784965.1| cysteinyl-tRNA synthetase [Ornithinibacillus scapharcae TW25]
Length = 466
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 216/394 (54%), Gaps = 38/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L TY PRV+D M+ I I+ ++ AY EGDV+F YG+LS Q ++
Sbjct: 104 LGVKKATYNPRVTDTMQDIIVFISNLVEKGYAYEAEGDVYFKPRAFEEYGKLSHQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R+G R+ V +K +P DFALWKAAK GE SWDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RSGARIQVGEKKDDPLDFALWKAAKEGEISWDSPWGLGRPGWHIECSAMAKKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + +YWMHNG++ NNEKMSKSLGNF R + E+
Sbjct: 224 HAGGQDLTFPHHENEIAQSEANNGKTFANYWMHNGYININNEKMSKSLGNFVLTRDLLEK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P +R F++S YR P+N+S L+SA +++ I Q+ H K++ N
Sbjct: 284 HDPDVIRFFMLSVQYRHPINFSEELLESAKNSLERIKTAYQNL--------GHRKSSSTN 335
Query: 244 PAAEDC-----INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
I+ LR +F M DD NT++ ++ F D K N LN K P
Sbjct: 336 LDDNTTEWLEKISALRKKFETEMDDDFNTANAISVLF-DLTKEANVYLNE-KHTSP---- 389
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
E + +N +K L ILG+ G S L +E++ LIEER
Sbjct: 390 ----EVIEAFQNLLKSFLEILGIKLEGNVS---------------LLDEEIETLIEERNE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK ++F+++D+IR L K I L D + W+
Sbjct: 431 ARKTRNFARADEIRDLLKEKNIILEDTPQGVRWK 464
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45.1|SYC_SODGM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 219/396 (55%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + +++ I +++ Q+I+ D AYV GDV FAV+ +YG LS Q LE
Sbjct: 103 LNILRPDQEPRATHYIDAIIELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DLIFPHHENEIAQS A V+ WMH G V + EKMSKSLGNFFT+R +
Sbjct: 223 IHGGGSDLIFPHHENEIAQSTCAHDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVLR 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+ G A
Sbjct: 283 YYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIALR------------GTDATA 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA D +F A M DD NT + F I +N LK +QP Q ++
Sbjct: 331 VPAGGD---HFVAQFIAAMDDDFNTPKAYSVLFD-----IAREVNRLKSEQPAAQGMA-- 380
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAA 358
+LR++ +LGLL P A+ LQQ E++V+ LI++R
Sbjct: 381 ATLRQLAG-------VLGLLEQEPAAF---LQQ---------GAAEDNVMIEALIQQRND 421
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ARK + ++ +D+ R LT GI L D + T WR C
Sbjct: 422 ARKARQWALADEARDKLTALGIVLEDGPQGTTWRRC 457
>gi|404379151|ref|ZP_10984218.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteinyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 219/405 (54%), Gaps = 52/405 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++H+ Q+ MI ++I N AY E GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATEHIAQMIQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAK EPSW SPWG GRPGWHIECSAM FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAA----CQ------------DSNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQSC A C DS+V YW+HNG + +NEK
Sbjct: 223 IHGGGADLQFPHHENEIAQSCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A +++ +Y TL +
Sbjct: 283 MSKSLGNFFTIRDVLKKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNV 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
+ +G N +F M+DD T+ ++ F+
Sbjct: 343 KPIEFKLDSNGNN-----------NDYTHKFFNAMNDDFGTAEAVSVLFE---------- 381
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
+ + K L L+ + +LGLL +Q L+
Sbjct: 382 --IANEANKNDSAELSGCLKTLGG-------VLGLLQDNP-----EQFLQGGNNVDGLSA 427
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+++ +LI +R AR+ K++++SD+IR L I + D T W
Sbjct: 428 DEINKLISQRKIARETKNWAESDRIRDILAEHKIQVKDSADGTTW 472
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 220/392 (56%), Gaps = 9/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L P +P+ ++++ ++ + ++I++ AY GDV+F V YG+LSG+
Sbjct: 99 MDKLGILRPNAEPKATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ R+G RVA K +P DFALWKA+K GEP W+SP+GPGRPGWH+ECSAMS L
Sbjct: 159 VEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGM 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQS AA YW+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PIDIHGGGQDLIFPHHENEIAQSEAAIGGEFCRYWVHNGFVRINTEKMSKSLGNFITIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I RY P LR FL+S+ YRSPL+YS LD A + IY E AL +
Sbjct: 279 IYARYLPEVLRFFLLSSQYRSPLDYSDQGLDEAEKGIKRIYAAKVQMEQALG--RAKWSE 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
++ + +++ + F A M DDLNT+ + F L + L M K K ++
Sbjct: 337 TKLPADVTEELSRHEEGFTAAMDDDLNTAQAMGHVF--GLVRLAGRL-MEDKTLAKSRET 393
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ E L +I + +LG+ A + L LK L R + V L+ ER A
Sbjct: 394 A--EVLGRILADFGVWAEVLGVFGTDA-TAFLADLKACRLTRLGIDAARVDGLVAERQDA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RK KDF++SD IR +L G+ +MD W
Sbjct: 451 RKAKDFARSDAIRDELASLGVTVMDTPTGPQW 482
>gi|422009692|ref|ZP_16356675.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414093510|gb|EKT55182.1| cysteinyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 462
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 222/399 (55%), Gaps = 51/399 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV GDV F V+ PNYG LS Q LE
Sbjct: 103 LNILRPDSEPRATRHIGEIIELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ + + P
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERMYTALRGTDKSAVPAGG------- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M+DD NT + F D ++ +N + K +
Sbjct: 336 ------------DEFKARFIEAMNDDFNTPEAYSVLF-DMVREVN---------RLKSED 373
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-----VLQLI 353
+S ++ +++E+ +LGL L+Q + LK TE+D + LI
Sbjct: 374 MSAANAMAA---QLRELAGVLGL---------LEQDPESFLKGGAQTEDDAEVAKIEALI 421
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++R AR+NKD++++D R +LT G+ L D T WR
Sbjct: 422 QQRLDARQNKDWAQADAARDELTAMGVVLEDGATGTTWR 460
>gi|365873642|ref|ZP_09413175.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
gi|363983729|gb|EHM09936.1| cysteinyl-tRNA synthetase [Thermanaerovibrio velox DSM 12556]
Length = 467
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 222/383 (57%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ ++ + I ++I +I AY V+GDV+F V+ P YG+L Q LE +AG R+
Sbjct: 110 TVNPKATEEIPHIIELIEILIRKGHAYQVDGDVYFDVKSYPAYGKLIRQDLEELQAGARI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKR+P DFALWKA K GEP+W+SPWG GRPGWHIECSAM H+L DIHGGG D
Sbjct: 170 DVDPRKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSAMCRHHLGETIDIHGGGCD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA V YW+HNG++ + EKMSKSLGNF T R + ++HPLA+
Sbjct: 230 LVFPHHENEIAQSEAATGKPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDVISKFHPLAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S L A A+ + + AL G + + A +
Sbjct: 290 RLFMLSAHYRSPINFSEDNLRQAQGALERLRNGWAEISFALKRQDSGGISEELRSAVRES 349
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
R++F M DDLNT+ + F I S+ + + + P +E+L +
Sbjct: 350 ----REQFLNAMDDDLNTAEAIGAVF----ALIRSANSHIGSQSPLD-----LEALNEAA 396
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+++V RI+G++ ++ A+ + ++ +LI R ARK ++F ++D
Sbjct: 397 RFLQDVDRIMGII---------------GIENAQALDHEIEELIHRRNQARKERNFKEAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
IR L GI L D + T W+
Sbjct: 442 AIRDKLLSMGIVLEDTPQGTRWK 464
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ + L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 222/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I N AYV E GDV F VE YG LS Q LE
Sbjct: 103 LNILRPDVEPRATKHIPEIIAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEIKSVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YSV LD A A+ +Y +L+ C+V S E G+
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTSLRGCDV--SGVAEGGE---- 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQLSL 301
+ F M DD NT L F+ I LN LK + K L++
Sbjct: 337 ---------HYVEAFKTAMDDDFNTPGALAVLFE-----IARELNKLKIEDMAKANGLAV 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
+KE+ +LGL L+Q + L+ ++E ++ LI++R A
Sbjct: 383 ---------RLKELAGVLGL---------LEQEPESFLQGDTNSDEAAEIEALIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ NK+++ +D++R L I L D TIWR
Sbjct: 425 KANKNWAVADEVRDKLKAMNIVLEDTPNGTIWR 457
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAASDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 219/406 (53%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 569 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 216/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + HM +I +M+ ++I + AYV GDV F+V P YGRLSGQ LE
Sbjct: 103 LNMARPDNEPRATLHMPEIIEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V+ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVEVEDAKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A + IY L+D ++ T
Sbjct: 283 HYDATTVRYFLLSGHYRSQLNYSEDNLKQAKSGLERIYTALKDLDL----------TVEA 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA E +F + M DD NT + F D ++ IN + K ++
Sbjct: 333 APAEE-----FVAKFKSAMDDDFNTPEAYSVLF-DMVREIN---------RLKATDMAKA 377
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+L ++ +VL ILG Q D K E +++V + LI ER A
Sbjct: 378 SALGVALKQLADVLGILG------------QDVDTFFK-GEGNDDEVAEIEALIVERNRA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R L G+ L D + T WR
Sbjct: 425 RAEKDWPAADVARDGLNALGVILEDGPEGTTWR 457
>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 486
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 232/392 (59%), Gaps = 31/392 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVA 70
PRV+DH+++I +I + AY V+GDV+++V P+YG+LS ++LE+ + G RVA
Sbjct: 113 PRVTDHIQEIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 71 VDS----RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 126
V +K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 127 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YH 185
G DL+FPHHENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R
Sbjct: 233 GGDLVFPHHENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVD 292
Query: 186 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK----TAR 241
P+ +R F++ HYR PL+++ + SA++ ++TL+D L Q++G +
Sbjct: 293 PMVVRLFILQGHYRKPLDFTDEAIASANNG----WETLKD---GLLFAQQYGAPLGWSDD 345
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+P D F M DD NT L F+ A K + N+L + Q
Sbjct: 346 SSPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDR 404
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
I ++ K + E+ + GL E + Q + A + +++ ++ L+++R +ARK
Sbjct: 405 IYAIWKT---LVELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARK 453
Query: 362 NKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
K++++ D+IR L G+ L+D G ET+WR
Sbjct: 454 AKNYAEGDRIRDQLQASGVTLIDRPGGETLWR 485
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 225/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A + +N +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGE-VNKTN 388
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N ++ +K + I+GLL +E LQ L+
Sbjct: 389 NA------------------QLAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 222/391 (56%), Gaps = 35/391 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR ++ MEQI MI +I AY GDV+++V NYG+ S + L
Sbjct: 103 LGILPPDVEPRATNTMEQIFCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNK 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
G R+ V+S K++P DF LWK +K EPSW SPWG GRPGWHIECSAMS H+L + FD
Sbjct: 163 LEIGARIKVESAKKDPLDFVLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG+DL FPHHENEIAQS A + V+ WMH G V NN+KMSKSL NFFTIR + +
Sbjct: 223 IHGGGMDLTFPHHENEIAQSEGANNCTFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ LR+F++S+HY SPLN+S L+ A ++ +Y T++ + + +T I
Sbjct: 283 NYNGEILRYFIMSSHYHSPLNFSDENLNKAKSSLSRLYTTIRGLNTS------NVRTEEI 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + + F+ + DD NT L+ F+ A K +N ++++ Q +L
Sbjct: 337 SIHFDYSV-----RFNEALDDDFNTPIALSVLFELA-KIVN-----IQRENNTDQAKTLA 385
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQLIEERAAARK 361
+ L+K+ G Y +LQ DK LK+ L++E + I R AR
Sbjct: 386 QLLKKL----------------GGYIGILQMNADKFLKQGISLSDEQINIKITNRNKARI 429
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKDF+ SD IR +L + I L D T WR
Sbjct: 430 NKDFTLSDYIRDELAKFDIILEDNINGTTWR 460
>gi|402312548|ref|ZP_10831472.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
gi|400369006|gb|EJP22009.1| cysteine--tRNA ligase [Lachnospiraceae bacterium ICM7]
Length = 469
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 232/399 (58%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M + LP T P ++ + +++MI+ +I+N AYV +G V+F V+ YG+LS +
Sbjct: 99 MEAMNVLPATKNPLATEEIGGMEEMISTLIDNGHAYVAKDGTVYFRVKSFDGYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP WDSPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFREIKVTGEDGKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKSLGNFFT
Sbjct: 219 LGDQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S ++++ +++ I +++ L Q+
Sbjct: 279 VRDISEKYDLQVLRFFMLSAHYRSPLNFSAELMEASKNSLERILTGVEN----LKDVQKK 334
Query: 237 GKTARINPAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
++ I A + L+D+F A M DD NT+ ++ F+ +K N+SLN
Sbjct: 335 NNSSPITDAELSNLEMAKVLKDKFVAAMDDDFNTADAISAIFE-LIKLSNTSLN------ 387
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ S +E + N ++ + +LG++ ++ E+ + ++ LI
Sbjct: 388 ----ENSTLEYANGLLNIIEPLCDVLGIITE---------------RKTEILDSEIEDLI 428
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E+R ARKNKDF+ +D+IR DL +GI L D + W+
Sbjct: 429 EQRTQARKNKDFALADKIRNDLLDRGIVLEDTREGVKWK 467
>gi|258655032|ref|YP_003204188.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
gi|258558257|gb|ACV81199.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
Length = 473
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 221/388 (56%), Gaps = 30/388 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L CL P+ +PR + H+ QI +MI +I AY GDV+FAV P+YG LSGQR++
Sbjct: 107 LGCLRPSVEPRATGHIPQILEMIAALIEAGHAYAAAGDVYFAVRTQPDYGFLSGQRIDEM 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
GE A KR+PADF LWKAAK GEPSWDSPWG GRPGWHIECSAM+ YL ++FDI
Sbjct: 167 VQGETEA--GGKRDPADFTLWKAAKPGEPSWDSPWGRGRPGWHIECSAMARAYLGTEFDI 224
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DLIFPHHENE AQS D YWMH+ VT EKMSKSLGN ++ ITE+
Sbjct: 225 HGGGLDLIFPHHENEAAQSH-GLGDVFARYWMHSHWVTMAGEKMSKSLGNILSVPTITEK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P+ALR++LIS HYRS + YS LD A+ A Y+ ++ F
Sbjct: 284 VRPVALRYYLISVHYRSSIEYSQEALDDAAKA----YERIE-------AFLHRAADRAGA 332
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
A I ++ D F M+DDL L + ++ N++L + Q+L+
Sbjct: 333 GADGVPIGEVPDAFRQAMNDDLGVPRALA-VVHEKVRAGNAALA--RSDDDAAQELA--- 386
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
+ V+ ++ +LGL P A +++ D+ L E T + L+ ERA AR ++
Sbjct: 387 ------SSVRAMVAVLGLDPWAA--PWVERKVDRRL--VEATGRLLDGLLAERAQARADR 436
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIW 391
DF+++D+IR + G A+ D +W
Sbjct: 437 DFARADEIRTQVAAAGFAIEDTKDGPVW 464
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/406 (39%), Positives = 224/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ + +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEV 384
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N Q + +K + I+GLL + ++ L+ A+ L+
Sbjct: 385 NKTNDAQ--------------LAGRLKALGGIIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVETFREA----MDDDFNTPNALSVLFEMA-----REINKLKAED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 426 AAKDWATADAARNELTAMGIVLEDGANGTTWR 457
>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|376001627|ref|ZP_09779490.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|375330014|emb|CCE15243.1| cysteinyl-tRNA synthetase [Arthrospira sp. PCC 8005]
Length = 486
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 229/389 (58%), Gaps = 25/389 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVA 70
PRV+DH+++I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVA
Sbjct: 113 PRVTDHIKEIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 71 VDS----RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 126
V +K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 127 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YH 185
G DL+FPHHENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R
Sbjct: 233 GGDLVFPHHENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVD 292
Query: 186 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINP 244
P+ +R F++ HYR PL+++ + SA + ++TL+D + + G +A +P
Sbjct: 293 PMVVRLFILQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSP 348
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
+ D F M DD NT L F+ A K + N+L + I +
Sbjct: 349 SKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYA 407
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
K + E+ + GL E + Q + A + +++ ++ L+++R +ARK K+
Sbjct: 408 TWKT---LVELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKN 456
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
+++ D+IR L G+ L+D G ET+WR
Sbjct: 457 YAEGDRIRDQLQANGVTLIDRPGGETLWR 485
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNILRPDFEPRATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ I LN LK + +
Sbjct: 334 --GGENFV----DAFREAMDDDFNTPNALSVLFE-----IARELNKLKTQD--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R A
Sbjct: 375 AKANGLAARLRELAAILGLL----------QLDPEQFLQASSDEDEVAKIEALIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R LT+ GI L D T WR
Sbjct: 425 RVAKDWPAADAARNALTQMGIVLEDGPNGTTWR 457
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| cysteine--tRNA ligase [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 234/396 (59%), Gaps = 19/396 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L + ++PR +++++Q++D+ +++I AY V GDV+F V P YG+LSG+
Sbjct: 99 MDRLNVVRADHEPRATEYIQQMQDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRS 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L+ +AG RVA K++P DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL
Sbjct: 159 LDELQAGARVAPGEEKQDPLDFALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYLP- 217
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQ+ AAC +W+HNG V N EKMSKSLGNF TIR
Sbjct: 218 -LDIHGGGQDLIFPHHENEIAQTEAACSCQLARFWVHNGFVQVNAEKMSKSLGNFKTIRD 276
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I Y P LR FL+ HYRSP++++ +D + A+ IY+ C++ E K
Sbjct: 277 ILASYLPETLRFFLLGKHYRSPIDFTADIMDESEKALQRIYE----CQLEAGKALERAKW 332
Query: 240 ARINPAAEDCINKLRDE----FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
+++ A+ I K DE F+A + DD+NT+ L F ++ +N L K +
Sbjct: 333 KKVDLPAD--ILKEWDEHGQGFNAALDDDVNTAQALGHIFSQ-VRLVNRVLED-KALRAG 388
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ L+E + N+ L + G P + L L+D+ R + V L++E
Sbjct: 389 EGARRLLEEFFERHNDWSAQLGLFGQDP----ATFLLALRDQRAARLNIDVPRVQTLLDE 444
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RAAAR KDF++SD++RA L G+A+ D + +W
Sbjct: 445 RAAARAAKDFARSDELRAALAELGVAVRDTVEGQVW 480
>gi|410454410|ref|ZP_11308349.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
gi|409932225|gb|EKN69192.1| cysteinyl-tRNA synthetase [Bacillus bataviensis LMG 21833]
Length = 465
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV ++M+ I D I +++ D AY EGDV+F + YG+LS Q +++
Sbjct: 104 LGCEKADVHPRVMENMDIIVDFIQKLVEKDFAYESEGDVYFRTRRFDEYGKLSHQSIDDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ V +K++ DFALWKAAK GE WDSPWGPGRPGWHIECSAM+ YL DI
Sbjct: 164 QVGARIEVGDKKQDDLDFALWKAAKEGEIFWDSPWGPGRPGWHIECSAMAKKYLGETIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YWMHNG++ +NEKMSKSLGNF + I +R
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALSGKLFSRYWMHNGYINIDNEKMSKSLGNFVLVHDIIKR 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLD---SASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++P LR F++S HYR+P+NYS L+ +A + + YQ L+ + A + ++
Sbjct: 284 HNPQVLRFFMLSVHYRNPINYSEELLENTKAAYERLTTSYQNLKHRKEASTDLTDN---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N D I L+ F M DD NT+ ++ F+ + + ++ +L+K +
Sbjct: 340 --NQEWLDKIAALQGSFVEAMDDDFNTALAISVLFELSKQ---ANYYLLEKN-------T 387
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
IE + N+ +E+ R+LGL L E+ +E++ LIE+R AR
Sbjct: 388 AIEVIDAFTNQFEELFRVLGL----------------TLGSEEMLDEEIDALIEKRNQAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++F SDQIR L I L D + T W+
Sbjct: 432 KDRNFQLSDQIRDQLKEMNIILEDTAQGTRWK 463
>gi|423062587|ref|ZP_17051377.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
gi|406715922|gb|EKD11074.1| cysteinyl-tRNA synthetase [Arthrospira platensis C1]
Length = 486
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 229/389 (58%), Gaps = 25/389 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVA 70
PRV+DH+++I +I Q+ AY V+GDV++ V P+YG+LS ++LE+ + G RVA
Sbjct: 113 PRVTDHIKEIHQLIDQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 71 VDS----RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 126
V +K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 127 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YH 185
G DL+FPHHENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R
Sbjct: 233 GGDLVFPHHENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVD 292
Query: 186 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARINP 244
P+ +R F++ HYR PL+++ + SA + ++TL+D + + G +A +P
Sbjct: 293 PMVVRLFILQGHYRKPLDFTDEAIASAKNG----WETLKDGLLFAEQYGARLGWSADSSP 348
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
+ D F M DD NT L F+ A K + N+L + I +
Sbjct: 349 SKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTPSDRIYA 407
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
K + E+ + GL E + Q + A + +++ ++ L+++R +ARK K+
Sbjct: 408 TWKT---LVELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARKAKN 456
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
+++ D+IR L G+ L+D G ET+WR
Sbjct: 457 YAEGDRIRDQLQANGVTLIDRPGGETLWR 485
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/392 (43%), Positives = 217/392 (55%), Gaps = 9/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR ++++ + DM ++I AY GDV+F V +YG+LSG+
Sbjct: 99 MDKLGILRADAEPRATEYVAAMADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ RAG RVA K +P DFALWKA+K GEP W+SP+GPGRPGWH+ECS MS L
Sbjct: 159 IEDMRAGARVAPGDEKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGI 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENEIAQS AA +W+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PFDIHGGGQDLIFPHHENEIAQSEAATGKEFCRFWVHNGFVRINTEKMSKSLGNFITIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I +RY P LR FL+++HYRSPL+YS LD A + +Y E AL+ + G
Sbjct: 279 IYKRYLPEVLRFFLVASHYRSPLDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTK 338
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A E + + F A M DD NT+ L F A++ L K K +
Sbjct: 339 LPAEIAEE--LARHEQGFIAAMDDDCNTAQALGHVFG-AVRLAGRLLE--DKTLAKSAET 393
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ I LR+I + + ILG+ + E L LK R + V L+ ER A
Sbjct: 394 ADI--LRRILADFETWSGILGVCGRDS-REFLDALKACRAARLGIDPTRVDALVAERQDA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RK KDF +SD IR +L G+ +MD W
Sbjct: 451 RKAKDFPRSDAIRDELATLGVTVMDTPTGPQW 482
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816.1|SYC_HAEIN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVATFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSNDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 TAKDWSAADSARNELTAMGIVLEDGPNGTTWR 457
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 217/391 (55%), Gaps = 38/391 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I N AYV E GDV F VE YG LS Q LE
Sbjct: 103 LNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEIKSVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YSV LD A A+ +Y L+ C+V+
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTALRGCDVS------------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK-QPKQQQLSL 301
A + + F M DD NT L F+ I LN LK + K L++
Sbjct: 330 --GAAEGGEHYVEAFKTAMDDDFNTPGALAVLFE-----IARELNKLKTEDMAKANGLAV 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+KE+ +LGLL E Q + + AE+ LI++R A+
Sbjct: 383 ---------RLKELAGVLGLLEQD--PESFLQGDTNSDEAAEIE-----ALIKQRNEAKA 426
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NK+++ +D++R L I L D TIWR
Sbjct: 427 NKNWAVADEVRDKLKAMNIVLEDTPNGTIWR 457
>gi|358450731|ref|ZP_09161184.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357225107|gb|EHJ03619.1| cysteinyl-tRNA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 462
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/395 (42%), Positives = 231/395 (58%), Gaps = 39/395 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + ++++I MI ++I AY + GDV+F+V+ +YG+LS ++L
Sbjct: 101 ARLGVLSPDEEPRATAYIDEIIAMIHKLIAGGHAYAADNGDVYFSVDSFDDYGKLSKKKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+PADFALWKAAKAGE SW SPWG GRPGWHIECSAMS L
Sbjct: 161 EDLLAGARVDVQEAKRSPADFALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + V+ WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 221 FDIHGGGPDLLFPHHENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y +R+FL+S+HYRS ++YS L A + +Y L+ + P K A
Sbjct: 281 MEKYPAEVVRYFLVSSHYRSQVDYSEENLAEAGRTLTRLYHALR----GIVP----AKAA 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + D + F M DD NT+ A+ +++ N + + + +
Sbjct: 333 DVPESEHD------ERFAEAMDDDFNTA--------GAIAVLHAVANEINQHRRDGR--- 375
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
E++ K+ IL L G +LQQ + +A EL+ ED+ +I+ RA
Sbjct: 376 --------EDDAKQSAAILVRL--GGVLGLLQQDPEAFFQADTGGELSAEDIEAMIQARA 425
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+F+++D+IR +L KGI L D + T WR
Sbjct: 426 DARKAKNFAEADRIRDELLEKGIILDDSREGTTWR 460
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I AY GDV++AV + P YG+LSG+ L++
Sbjct: 124 LGVLRPDLEPKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDD 183
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 184 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFD 243
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 244 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEK 303
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A A+ +Y L++
Sbjct: 304 MSKSLGNFFTIRDVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNT 363
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A A + N F+A M+DD T + F+
Sbjct: 364 PPA-------------GFALSETANNYTRRFYAAMNDDFGTVEAVAVLFE---------- 400
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K + +L L+ + I+GLL +E LQ L+
Sbjct: 401 --LAGEVNKTRDAALSGCLKALGG-------IIGLLQRDP-TEFLQ----GGTASDGLSN 446
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR LT + I L D T WR
Sbjct: 447 EEIENLIAMRKQARADKNWAESDRIRDLLTAQNIILEDSAGITTWR 492
>gi|421556545|ref|ZP_16002460.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
gi|402337218|gb|EJU72468.1| cysteine--tRNA ligase [Neisseria meningitidis 80179]
Length = 473
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 218/406 (53%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKA KAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKATKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGSRIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVETFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 426 AAKDWATADAARNELTAMGIVLEDGANGTTWR 457
>gi|410666863|ref|YP_006919234.1| cysteinyl-tRNA synthetase [Thermacetogenium phaeum DSM 12270]
gi|409104610|gb|AFV10735.1| cysteinyl-tRNA synthetase CysS [Thermacetogenium phaeum DSM 12270]
Length = 507
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 226/403 (56%), Gaps = 26/403 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR S+H+ ++ DM+ + AY GDV+F+V P YG+LSG+ LE AG RV
Sbjct: 109 TVHPRASEHIPEMIDMVRVLCEKGIAYEYGGDVYFSVRSFPGYGKLSGRTLEEMLAGARV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RKR+P DF LWKAAK GEP W+SPWG GRPGWH+ECS MS YL FDIHGGG D
Sbjct: 169 EVDERKRDPLDFVLWKAAKPGEPFWESPWGAGRPGWHLECSVMSLKYLGFGFDIHGGGSD 228
Query: 130 LIFPHHENEIAQSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
LIFPHHENEIAQ+ A A + YW+HNG VT + EKMSKSLGNFF +R + + + P
Sbjct: 229 LIFPHHENEIAQAEAYAGSEPFARYWVHNGFVTVDEEKMSKSLGNFFLVRGLLQEWAPEI 288
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR FL+S HYRSPL+++ L +A + + TL + Q R+ AE
Sbjct: 289 LRFFLLSTHYRSPLDFNDAALKNARKSFNRLGNTLDLLNDTVGDGQGKKTAGRLAREAEA 348
Query: 249 CINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
+++ D +F M DD NT+ L F + IN +N + QP L L+ +
Sbjct: 349 FRSRVADCVAQFEEAMDDDFNTALALAALFNMG-REINGFING-DQFQPTPGVLYLLAQI 406
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQ-----------LKDKALKRA-----ELTEEDV 349
R+ +L +LGL+ PG E+ ++ LKD+A R + E +
Sbjct: 407 REY---YLNLLDVLGLV-PGEKRELGEEYRQPLIRIALSLKDEAGGRLPDRLPDGPRELL 462
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
L++ R AR+ K++ SD +R L +GI + D + T WR
Sbjct: 463 ELLLKIRREARQQKNYQLSDALRDALREEGIIIEDTPRGTRWR 505
>gi|429744209|ref|ZP_19277714.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
gi|429163425|gb|EKY05652.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 020 str. F0370]
Length = 473
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ ++ MI +I D AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDLEPKATENIAEMIAMIENLIARDKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSEKLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHACGHDHAVTHHGKPVASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A A+ +Y L+
Sbjct: 283 MSKSLGNFFTIRDVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKHT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PPAEFALSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K Q L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTQSAELAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVADG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E+V LI +R AR +K++++SD+IR LT + I L D T WR
Sbjct: 426 EEVEALIAQRKQARADKNWAESDRIRDLLTAQNIILEDGAGGTSWR 471
>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
gi|187629803|sp|A5N4M6.1|SYC_CLOK5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765185|sp|B9DY88.1|SYC_CLOK1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 465
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 223/389 (57%), Gaps = 27/389 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PR + ++ +I + I +I+ AY V+GDV+F +K NYG+LSGQ +E
Sbjct: 102 LNIKRATVNPRATLYISKIIEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
++G R+ +D RK+NP DFA+WK+ K GEPSW+SPWG GRPGWHIECS M+ + L DI
Sbjct: 162 QSGARIDIDERKKNPMDFAVWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS YWMH+ V NN+KMSKSL NFFT R+I ++
Sbjct: 222 HAGGSDLKFPHHENEIAQSEGRTGKVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILDK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y P +R F++S HYR+P+N+S+ LDS A+ I ++ + E S + G
Sbjct: 282 YEPDVIRLFMLSGHYRTPINFSIELLDSTKSALDRICNSIINLEELSSKVKNDG-ILDSE 340
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
++ +N + + +M DD NT+ ++ F D ++ IN++++ + + L+LI
Sbjct: 341 IKYKEHLNSYKQRYIEKMDDDFNTADAISVIF-DLIRDINTNIDENSSMEIIKYSLALIR 399
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
L G+ +LQ+ K ++ E +V LIE+R ARK+K
Sbjct: 400 EL-------------------GSPLGILQKSKRGSI------ETEVELLIEKRQKARKDK 434
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
+++ +D+IR DL KGI L D W+
Sbjct: 435 NWALADKIRDDLKDKGIILEDTSDGVRWK 463
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 224/406 (55%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ A +
Sbjct: 569 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELA-----GEV 610
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N Q + +K + I+GLL + ++ L+ A+ L+
Sbjct: 611 NKTNDAQ--------------LAGRLKALGGIIGLLQ----RDPIEFLQGGAVSDG-LSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY V DV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|404483021|ref|ZP_11018246.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
gi|404344111|gb|EJZ70470.1| cysteine-tRNA ligase [Clostridiales bacterium OBRC5-5]
Length = 492
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 231/399 (57%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M + LP T P ++ + +++MI+ +I N AYV +G V+F V+ YG+LS +
Sbjct: 122 MEAMNVLPATKNPLATEEIGGMEEMISTLIENGHAYVAKDGTVYFRVKSFDGYGKLSHKN 181
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP WDSPW GRPGWHIECS MS Y
Sbjct: 182 IDELQSGFREIKVTGEDGKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKY 241
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKSLGNFFT
Sbjct: 242 LGDQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFT 301
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S ++++ +++ I +++ L Q+
Sbjct: 302 VRDISEKYDLQVLRFFMLSAHYRSPLNFSAELMEASKNSLERILTGVEN----LKDVQKK 357
Query: 237 GKTARINPAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
++ I A + L+D+F A M DD NT+ ++ F+ +K N+SLN
Sbjct: 358 NNSSPITDAELSNLEMAKVLKDKFVAAMDDDFNTADAISAIFE-LIKLSNTSLN------ 410
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ S +E + N ++ + +LG++ ++ E+ + ++ LI
Sbjct: 411 ----ENSTLEYANGLLNIIEPLCDVLGIITE---------------RKTEILDSEIEDLI 451
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E+R ARKNKDF+ +D+IR DL +GI L D + W+
Sbjct: 452 EQRTQARKNKDFALADKIRNDLLDRGIVLEDTREGVKWK 490
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 230/396 (58%), Gaps = 34/396 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
++ L L +P+V+++M ++ ++I ++I+N AY +GDV+F V+K +YG+LS Q++
Sbjct: 99 ISKLNILESVKRPKVTENMSEVIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKI 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E G R+ V K+NP DFALWK K GEP W+SPWG GRPGWHIECSAM+ YL
Sbjct: 159 EELELGARIDVSEIKKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDT 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A + +YW+HNG + N +KMSKSLGNFF +R+I
Sbjct: 219 FDIHGGGQDLVFPHHENEIAQSKCAYHGNFANYWLHNGFIQINGDKMSKSLGNFFLLREI 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E++ +R F++S HYR P+N+S ++ A+ I +++ E + ++
Sbjct: 279 LEKFSGNVIRLFILSTHYRKPINFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIEN 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAF---QDALKFINSSLNMLKKKQPKQQ 297
N I++ +F M++D+NT L F ++ KFI+++ +
Sbjct: 339 VKNSEFSQKIDEFDKKFEEAMAEDMNTPQALATIFDQIRETNKFISTN----------ES 388
Query: 298 QLSLI--------ESLR-KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 348
+ S I +SL+ KIEN + G+ EV +K++ + ELT++
Sbjct: 389 EFSTIYYEIKKSYDSLKAKIEN-------VFGIAI-----EVENAVKEEDGENMELTKKL 436
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 384
+ LI+ R+ AR K+F SD+IR +L G+ + D
Sbjct: 437 IELLIKLRSEARSEKNFKLSDEIRDELKVLGVEIKD 472
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAK GEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + ++ L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPIEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|347731165|ref|ZP_08864267.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
gi|347520052|gb|EGY27195.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. A2]
Length = 485
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 220/392 (56%), Gaps = 9/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR + H+ ++ + ++I AY GDV+F V P YG+LSG+
Sbjct: 99 MDRLNVLRADIEPRATTHIAEMISLCERLIEQGKAYATPSGDVYFRVRAFPGYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+++ R+G RVA K +P DFALWK AK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 159 VDDLRSGARVAPGEEKEDPLDFALWKGAKPGEPYWESPWGRGRPGWHIECSAMSEKHLPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL+FPHHENEIAQ+ AA V YW+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLVFPHHENEIAQTEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E Y P LR+FL++ HYRSP++++ +D A + IY+ L L +E +
Sbjct: 279 ILENYLPETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELQ--REKWTS 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ + LR F M DD+NT+ L F ++ N L+ K Q K +
Sbjct: 337 GPLPKDVTEEFEGLRQAFADAMEDDMNTAAALGHVFT-MVRLANRILD--NKGQRKTEGA 393
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
E R++ +E + +LG+ +E L +L+ + R + V +L++ R A
Sbjct: 394 R--ELFRRVLDEARAWTAVLGVFGRDP-AEFLAELRACRVARKSIDPARVEELMQARINA 450
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R +KDF+++D IR ++ GI + D +W
Sbjct: 451 RADKDFARADAIRDEIAALGIEVRDTPSGAVW 482
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
E+ N F+A M+DD T + F+
Sbjct: 343 PAVAFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN- 341
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
T +P + + F+ M+DD +T + F+
Sbjct: 342 ------------TPPADPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI +R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIAQRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|423507884|ref|ZP_17484451.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449086756|ref|YP_007419197.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
gi|402442671|gb|EJV74592.1| cysteinyl-tRNA synthetase [Bacillus cereus HD73]
gi|449020513|gb|AGE75676.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. HD73]
Length = 465
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 226/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE I K + F M+DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--IEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL ++++ +LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELSKEELLDKEIEELIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 227/389 (58%), Gaps = 33/389 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H++ I MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
+FL+S HYRSPL++S +L+ A+ ++L+ A+ + P + D
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEA 342
Query: 251 NKL-------RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+L +EF MSDD NT+ + F A +N+ + ++ + E
Sbjct: 343 QRLLEKAKAYEEEFEDAMSDDFNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQE 397
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
++ +++ K + ++G+L + + A EE + ++ R A R+ K
Sbjct: 398 AIAEVKRIFKFMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQK 449
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI + D + W+
Sbjct: 450 QWALADCIRDRLAEIGITIEDSPQGARWK 478
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 217/396 (54%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNILRPDAEPRATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEITEVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A S V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ + +++ HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG---- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M DD NT + F A +N L K + Q
Sbjct: 336 ------------DEFEARFREAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAA 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L +LRK+ +LGLL P + + Q+ D+ +K E LI++R
Sbjct: 378 NQLASALRKLSG-------VLGLLEQDPEQFLQNGAQVDDEEVKEIE-------ALIQQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD++ +DQ R L GI L D + TIWR
Sbjct: 424 KDARAAKDWALADQARDRLNEMGIVLEDGPQGTIWR 459
>gi|383816533|ref|ZP_09971929.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
gi|383294627|gb|EIC82965.1| cysteinyl-tRNA synthetase [Serratia sp. M24T3]
Length = 462
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 217/390 (55%), Gaps = 33/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I +++ Q+I+ D AYV V GDV F+V PNYG LS Q L+
Sbjct: 103 LGILRPDLEPRATHHIPEIVEIVQQLIDRDHAYVAVNGDVMFSVASDPNYGLLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM+ L S FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWNSPWGNGRPGWHIECSAMNCKQLGSHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+ WMH+G V + EKMSKSL NFFT+R + +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL+S HYRS LNYS L A ++ +Y L+ G A
Sbjct: 283 YYDAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALR------------GTDANA 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + F + M DD NT + F A +N LK + P
Sbjct: 331 QPAGGE---EFEARFRSAMDDDFNTPEAYSVLFDMA-----RDINRLKSENP-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ + E++ + ILGLL E Q +A E+ E + LI++R AR +
Sbjct: 375 QAANGLAAELRRLAGILGLLAQD--PEQFLQSGAQADDNDEVAE--IETLIKQRKDARAS 430
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +DQ R L GI L D T WR
Sbjct: 431 KDWALADQARDRLNEMGIVLEDGASGTTWR 460
>gi|422017177|ref|ZP_16363745.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|414105882|gb|EKT67436.1| cysteinyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 462
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 221/390 (56%), Gaps = 33/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV + GDV F V+ PNYG LS Q L+
Sbjct: 103 LNILRPDSEPRATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ + + +P
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSATP---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A I K R F M+DD NT + F A LN LK + +
Sbjct: 333 ---AGGEIYKSR--FCEAMNDDFNTPEAYSALFDMA-----RELNRLKTEN--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ + +++E+ ++LGLL E Q ++ AE+ + + LI++R AR++
Sbjct: 375 DAANGMAAQLRELAKVLGLLEQD--PETFLQGGAQSEDDAEVAK--IEALIKQRNDARQS 430
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +DQ R LT GI L D T WR
Sbjct: 431 KDWALADQARDALTAMGIVLEDSSAGTTWR 460
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 222/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ + +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEV 384
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N Q + +K + I+GLL +E LQ + L+
Sbjct: 385 NKTNDAQ--------------LAGRLKALGGIIGLLQRDP-TEFLQ----GSAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
E+ N F+A M+DD T + F+
Sbjct: 343 PATAFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ + +
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEV 384
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N Q + +K + I+GLL +E LQ L+
Sbjct: 385 NKTNDAQ--------------LAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|436840386|ref|YP_007324764.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169292|emb|CCO22660.1| cysteinyl-tRNA synthetase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 485
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 228/394 (57%), Gaps = 13/394 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ ++H+ ++ ++ +I AY GDV+F V YG+LSG+
Sbjct: 99 MDKLNILRADIEPKCTEHIPEMIELTKTLIEKGNAYSTASGDVYFKVRSFEGYGKLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ ++G R+ K +P DFALWKAAK GEPSW+SPWG GRPGWH+ECSAMS YLS
Sbjct: 159 IEDLQSGARIKPGEEKEDPLDFALWKAAKPGEPSWESPWGRGRPGWHLECSAMSEKYLSL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS AA +W+HNG V N+EKMSKSLGNFFTIR
Sbjct: 219 PFDIHGGGQDLSFPHHENEIAQSEAATGKEMARFWVHNGFVQINSEKMSKSLGNFFTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E++ P LR+FL++ HYRSPL++S L+ A + +Y ++ AL +
Sbjct: 279 ILEKFMPETLRYFLLTMHYRSPLDFSFEALEEAEKGIRRVYTAMEQMNEALQKKKWSKAA 338
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ AE I++ ++ M DD+NT+ GA I + + + K ++ +
Sbjct: 339 LPADVLAE--IDEAEKGWNEAMEDDMNTA----GAMGHIFTLIRLAGRIAEDKAWRKSEG 392
Query: 300 SLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
++ +I +++K +LG+ P + L+ LK L+R + V +L+ R
Sbjct: 393 GR-DAWVRILDDMKTWGTVLGIFTEEPKVF---LENLKLCMLERKGIEVAKVEELVAARQ 448
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK+KDF++SD+IR +L G+ + D + W
Sbjct: 449 DARKSKDFARSDEIRDELIELGVDVKDTPQGPAW 482
>gi|334129555|ref|ZP_08503359.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
gi|333445240|gb|EGK73182.1| Cysteinyl-tRNA synthetase [Methyloversatilis universalis FAM5]
Length = 459
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 224/397 (56%), Gaps = 50/397 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR ++ + Q++ +I ++ AY GDV ++V K YG+LSG+ L++
Sbjct: 103 LGVLRPDHEPRATEFVPQMQTLIQRLEAKGLAYRAASGDVNYSVRKFDGYGKLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERV V K++P DF LWK AK EP+ W SPWG GRPGWHIECSAMS+ L
Sbjct: 163 LRAGERVDVIDDKQDPLDFVLWKHAKPAEPAEAKWASPWGDGRPGWHIECSAMSSQLLGD 222
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
+FDIHGGG DL FPHHENEIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR+
Sbjct: 223 RFDIHGGGADLQFPHHENEIAQSEGAHGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRE 282
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 VLQKYDPEVVRFFILRAHYRSPLNYSDAHLDDARGALTRLYTTLKN-------------- 328
Query: 240 ARINPAA--EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ PAA D F A M DD NT+ L F+ L + +
Sbjct: 329 --VPPAACQPDWNTPAGSRFRAAMDDDFNTAEALAVLFE------------LSNEANRGN 374
Query: 298 QLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
++ LR + +LGLL P + LK +A + L + + LI +
Sbjct: 375 DAAVAGELRALAG-------VLGLLERSPEDF------LKGRA-QAGGLDDAQIEALIAQ 420
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AA+K +DF+ +D++R +L ++GI L D T WR
Sbjct: 421 RVAAKKARDFATADRVRDELKQQGIILEDSAAGTTWR 457
>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 466
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 221/383 (57%), Gaps = 27/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ + +I + +++ AY V+GDV+F+ +K YG+LSGQ +E+ ++G R+
Sbjct: 109 TVNPRATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
+VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG D
Sbjct: 169 SVDERKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSD 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + YW+H+ V NNEKMSKSL NFFT R+I ERY +
Sbjct: 229 LKFPHHENEIAQSEALTGEPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILERYDADVI 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R ++SAHYR LN+S L+SA +V IY + + E + A +
Sbjct: 289 RFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEE-EKAYLES 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+N+ ++++ +M DD NT+ +T F D +K N+++ + K+ Q+ L LI
Sbjct: 348 LNQYKEKYIEKMDDDFNTADAITAIF-DLIKDTNTNITIDSSKELAQKALELI------- 399
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
R LG P G + + + L EE + LI +R ARK++DF+ +D
Sbjct: 400 -------RELG-APLGMFQKS---------TKGNLAEE-IEALIAKRQQARKDRDFALAD 441
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L +GI L D + W+
Sbjct: 442 KIRDELKDRGIILEDTPQGVRWK 464
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 229/429 (53%), Gaps = 53/429 (12%)
Query: 11 YQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVA 70
Y PRVSDH+ I +I ++ AY + GDV++ V YG+LSG+ LE AG RV
Sbjct: 110 YHPRVSDHIPDIIRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVE 169
Query: 71 VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 130
VD RK +P DFALWK AK GEP+W+SPWGPGRPGWHIECS M+ YL DIHGGG DL
Sbjct: 170 VDERKEDPMDFALWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADL 229
Query: 131 IFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
+FPHHENEIAQS A V YW+HNG +T N EKMSKSLGNFF +R+I +Y +R
Sbjct: 230 VFPHHENEIAQSEAYSGRPFVRYWLHNGFITVNKEKMSKSLGNFFILREILSQYPAEVVR 289
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE--VALSPFQEHGKTARINPAAED 248
+L S HYRSPL++ +L+ A A+ + TL+ V + + +T +
Sbjct: 290 FYLGSTHYRSPLDFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADKGFVS 349
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+++L+++F M DD NT+ + G D + IN+ L+ + + + ++ E+ R
Sbjct: 350 RLHELKEKFEVAMDDDFNTAQAI-GYLFDMAREINAYLDFWEGEGSSKAPAAIKEAYR-- 406
Query: 309 ENEVKEVL--RILGLLP----------PGAYSEVLQQLKDKALKRAELTE---------- 346
V +L ILG L E+L ++K++AL+ L
Sbjct: 407 ---VFTLLGGNILGFLSEDFEHKGHGISDKVIEILFEMKEEALESGSLERVERILSCLQS 463
Query: 347 -----EDVLQ------------------LIEERAAARKNKDFSKSDQIRADLTRKGIALM 383
ED L+ R+ AR+NKDF+ +D IR +L + G+ +
Sbjct: 464 AGIEIEDTFSGSTWRANRPVNVSDLIEPLLSWRSEARRNKDFTTADVIRDNLKKIGVVVE 523
Query: 384 DMGKETIWR 392
D + WR
Sbjct: 524 DTREGARWR 532
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG+RV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGKRVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAAFELSENA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL + + L+ A+ L+
Sbjct: 380 --LAGEVNKTNDAHLAGCLKALGG-------IIGLLQ----RDPTEFLQGGAVSDG-LSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 221/389 (56%), Gaps = 43/389 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + H+E+I DM+ ++++ D AYV GDV F+V P YG+LSGQ L+ +AG
Sbjct: 108 PDFEPRATLHIEEIIDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D+ KRNP DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEIDNAKRNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVLKHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ ++ + AE
Sbjct: 288 TVRYFLLSGHYRSQLNYSEDNLKQARAALERLYTALKGLDLTVDA-----------APAE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ K F + M DD NT + F+ + +N LK + +L SL++
Sbjct: 337 AFVAK----FKSAMDDDFNTPEAYSVLFE-----MVREINRLKTTDMAEAS-ALGVSLKQ 386
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
+ + +LGL+ +A + E ++++V + LI ER AR KD
Sbjct: 387 LAD-------VLGLISQTP----------EAFFKGEGSDDEVAEIEALIVERNRARTEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKE-TIWR 392
+ +D R L G+ L D G T WR
Sbjct: 430 WPAADVARDRLNELGVELEDGGPSGTTWR 458
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4.1|SYC_ERWCT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 213/392 (54%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ I +M+ +I AYV GDV F+V+ + YG LS Q L+
Sbjct: 103 LNILRPDAEPRATHHIADIIEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LRAGARVEITEVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ + ++ + HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDPSV---EAHGG---- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
++ FH M DD NT + F A +N L K + Q L
Sbjct: 336 --------DEFEARFHDAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAANQLA 381
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+LRK+ +LGLL P + + Q+ D +K E LI++R AR
Sbjct: 382 STLRKLSG-------VLGLLEQDPEQFLQNGAQVNDDEVKEIE-------ALIQQRKDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +DQ R L GI L D + TIWR
Sbjct: 428 ATKDWALADQARDRLNEMGIVLEDGPQGTIWR 459
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/382 (41%), Positives = 215/382 (56%), Gaps = 20/382 (5%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
P VS HM I DM+ +I AYV+ DV++ + +Y +LSG+++E+ AG RV V+
Sbjct: 114 PYVSKHMGDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVN 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+ KRNP DFALWK AK GEP W+SPWG GRPGWHIECS MS HYL + FD HGGG DLIF
Sbjct: 174 TAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENEIAQS A V YW+HNG +T N+EKMSKSL NFF ++ + E+Y ALR+F
Sbjct: 234 PHHENEIAQSEGATGQKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEKYSGDALRYF 293
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA--EDCI 250
L+S HYRSPL++S +L+ A + L+D + ++ N + +
Sbjct: 294 LLSTHYRSPLDFSDERLEEAEKNM----SKLKDVIARIKEMEKEDGKVETNESVSLKKAA 349
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
+ +EF M+DD NT + TG D +K IN N + ++ ++IE+ +
Sbjct: 350 ARTIEEFRQAMNDDFNTG-LATGVLFDFVKDINIYYNAVNSGVAIDKE-AVIEA----KE 403
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
K +L ILG+L +E Q L E ++ R ARK K + +D+
Sbjct: 404 TFKTILDILGILE----NEWNIQESHAGSDYDALME----MILSVREIARKEKQYKLADE 455
Query: 371 IRADLTRKGIALMDMGKETIWR 392
IR L GI + D W+
Sbjct: 456 IRDKLAELGITVEDSATGARWK 477
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
gi|109894898|sp|Q30ZH8.1|SYC_DESDG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio alaskensis G20]
Length = 485
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 227/395 (57%), Gaps = 15/395 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
M L CL +PR + H+ ++ + +I+ AY GDV+F V +YG+LSG+
Sbjct: 99 MDRLGCLRADIEPRCTQHIGEMIALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRD 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+++ R+G RVA K +P DFALWK+AK GEP W+SPWG GRPGWHIECSAMS +L
Sbjct: 159 VDDMRSGARVAPGEEKEDPLDFALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL+FPHHENEIAQ+ AA YW+HNG V N EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLVFPHHENEIAQTEAATGKEFARYWVHNGFVQVNAEKMSKSLGNFSTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I + Y P LR+FL++ HYRSP++++ +D A + IYQTL E L +
Sbjct: 279 ILQGYLPETLRYFLLTKHYRSPIDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAA- 337
Query: 240 ARINPAAEDCINKLRDE---FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
P E+ ++++ + ++ M DDLNT+ L F ++ +N + ++ Q
Sbjct: 338 ----PLPEEVLSEMDETERAWNEAMEDDLNTAAALGHIF-GLVRLVNRIIEDKTMRKSAQ 392
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ ++L ++++ + +LGL +E L++++D R ++ V L+ ER
Sbjct: 393 AR----DALLRMQSMMARWGAVLGLFTRQP-AEFLREMRDCRAARRDVDTARVETLLLER 447
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK KDF +SD IR +L R G+ + D W
Sbjct: 448 QEARKAKDFERSDAIREELARMGVEVQDTPAGAAW 482
>gi|409992104|ref|ZP_11275315.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
gi|409937048|gb|EKN78501.1| cysteinyl-tRNA ligase [Arthrospira platensis str. Paraca]
Length = 486
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 231/392 (58%), Gaps = 31/392 (7%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE--RVA 70
PRV+DH+++I +I + AY V+GDV++ V P+YG+LS ++LE+ + G RVA
Sbjct: 113 PRVTDHIQEIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 71 VDS----RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 126
V +K+NPADFALWKAAK GEP+WDSPWGPGRPGWHIECSAM L DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 127 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER-YH 185
G DL+FPHHENEIAQS AA + YWMHNG VT EKMSKSLGNF TIR++ +R
Sbjct: 233 GGDLVFPHHENEIAQSEAATGKTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLDRPVD 292
Query: 186 PLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK----TAR 241
P+ +R F++ HYR PL+++ + SA++ ++TL+D L Q++G +
Sbjct: 293 PMVVRLFILQGHYRKPLDFTDEAIASANNG----WETLKD---GLLFAQQYGAPLGWSDD 345
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+P D F M DD NT L F+ A K + N+L + Q
Sbjct: 346 SSPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELA-KELRRQGNLLAHEGKTDTQSDR 404
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
I ++ K + E+ + GL E + Q + A + +++ ++ L+++R +ARK
Sbjct: 405 IYAIWKT---LVELAGVFGL-------EAVTQAQPPAATQG-ISDAEIEDLVKQRQSARK 453
Query: 362 NKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
K++++ D+IR L G+ L+D G ET+WR
Sbjct: 454 AKNYAEGDRIRDQLQASGVTLIDRPGGETLWR 485
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 219/388 (56%), Gaps = 42/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + HM +I DM+ ++I + AYV + GDV F+V YGRLSGQ +E +AG
Sbjct: 108 PDFEPRATQHMPEIIDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+ KR+P DF LWK +K GEP+W+SPWG GRPGWHIECSAM++ +L FDIHGGG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+YWMH G V + EKMSKSL NFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLKHYDAG 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y +L+ ++ + P A+E
Sbjct: 288 TIRYFLLSGHYRSQLNYSEDNLKQAKSALDRLYTSLKGLDLNVEP----------ADASE 337
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +F A M DD NT + F D ++ IN + K Q S +
Sbjct: 338 FVV-----KFKAAMDDDFNTPEAYSVLF-DMVREIN------RVKGSDLAQASAMGV--- 382
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAARKNKD 364
++KE+ +LGL L Q D K E ++++V Q LI ER AR KD
Sbjct: 383 ---KLKELAGVLGL---------LDQDVDIFFK-GEGSDDEVAQIEALIVERNRARAEKD 429
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L G+ L D T WR
Sbjct: 430 WPAADVARDGLNALGVILEDGPSGTTWR 457
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/389 (40%), Positives = 227/389 (58%), Gaps = 33/389 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H++ I MI +I+ AY ++GDV+++VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL ++FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ Q V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSG-QHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
+FL+S HYRSPL++S +L+ A+ ++L+ A+ + P + D
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEAN-------KSLERLSTAIENLL---YLEKCEPGSCDEA 342
Query: 251 NKL-------RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+L +EF MSDD NT+ + F A +N+ + ++ + E
Sbjct: 343 QRLLEKAKAYEEEFEDAMSDDFNTALATSSMFGLA-----KEINIYYQAVTSREGVVCQE 397
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
++ +++ K + ++G+L + + A EE + ++ R A R+ K
Sbjct: 398 AIAEVKRIFKFMTDVIGVLE--------KAWEGNTGANAAEYEELMQVILSVRQACREQK 449
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D IR L GI + D + W+
Sbjct: 450 QWALADCIRDRLAEIGITIEDSPQGARWK 478
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 217 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 276
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 277 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 336
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 337 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 396
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 397 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 456
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+ + +
Sbjct: 457 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFE-----LAGEV 498
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
N Q + +K + I+GLL +E LQ L+
Sbjct: 499 NKTNDAQ--------------LAGRLKALGGIIGLLQRDP-TEFLQ----GGAASDGLSN 539
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 540 EEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 585
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 216/396 (54%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNILRPDAEPRATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEITEVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A S V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ + +++ HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAA---HGG---- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M DD NT + F A +N L K + Q
Sbjct: 336 ------------DEFEARFREAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAA 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L +LRK+ +LGLL P + + Q+ D +K E LI++R
Sbjct: 378 NQLASALRKLSG-------VLGLLEQDPEQFLQNGAQVDDDEVKEIE-------ALIQQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD++ +DQ R L GI L D + TIWR
Sbjct: 424 KDARAAKDWALADQARDRLNEMGIVLEDGPQGTIWR 459
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + N EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVNKEKMSKSLGNFFTIRDVLS 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ ++ RD M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFVDAFRDA----MDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A +++V + LI++R A
Sbjct: 385 AKANGLAARLRELAGILGLL----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEA 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R LT GI L D T WR
Sbjct: 435 RAAKDWPAADAARNALTEMGIVLEDGPNGTTWR 467
>gi|345858483|ref|ZP_08810876.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
gi|344328502|gb|EGW39887.1| cysteinyl-tRNA synthetase [Desulfosporosinus sp. OT]
Length = 455
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 230/399 (57%), Gaps = 36/399 (9%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLEN 62
+L LP T P+ ++H+ ++ ++I ++++N AY +GDV+FAV+ PNYG+LSG+ LE+
Sbjct: 80 ELNLLPATIHPKATEHIPEMIEIIQELVSNGLAYETDGDVYFAVDHFPNYGKLSGRTLED 139
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV VD RK +P DFALWK AK EP W+SPWG GRPGWHIEC+AMS YL S FD
Sbjct: 140 MKAGARVEVDERKHHPMDFALWKKAKPEEPFWESPWGNGRPGWHIECTAMSLKYLGSGFD 199
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
+HGGG DL+FPHHENEIAQ+ + + YWMHN +T N EKMSKSLGNFFTIR++
Sbjct: 200 VHGGGEDLVFPHHENEIAQTEGYLKGQTFAHYWMHNAFLTINQEKMSKSLGNFFTIRELL 259
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
++ +R +L+ HYRSPL+++ L A + ++ +++ + AL G ++
Sbjct: 260 AKFSGEVIRFYLLGTHYRSPLDFNDQNLVMAQKGLERLHTSIRLAQEALD---REGSSSN 316
Query: 242 INPAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
AE + R+ F M DD N++ F+ + ++N ++ P
Sbjct: 317 EQIEAELFKAAKEAREAFEKAMDDDFNSALAYAALFE-----LAKTMNGCVQENPAPS-- 369
Query: 300 SLIESLRKIENEVKEVLRILGL------LPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
E+L + + E+ +LG+ L P A E L+Q+ E VLQ+
Sbjct: 370 ---EALATAQKTLLELGGVLGIDLLHSVLVPAANDETLKQVM-----------EVVLQI- 414
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ +R+ KD+ +D IR L KGI + D + W+
Sbjct: 415 --RSRSRQKKDWEMADFIRDALKDKGIVIEDTPQGARWQ 451
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 225/390 (57%), Gaps = 35/390 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+ I MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE P + R+
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLE 347
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLI 302
A++ +EF A MSDD NT+ + F A K IN ++ ++ Q ++ +
Sbjct: 348 KAKE----YEEEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEV 402
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ + K EV VL GA + +QL D L R A R+
Sbjct: 403 KRIFKFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSV--------------RQACREQ 448
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K ++ +D IR L GI + D W+
Sbjct: 449 KQWALADCIRDRLAEIGITIEDSPTGARWK 478
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 221/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+
Sbjct: 343 PPA-------------DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNNAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 225/390 (57%), Gaps = 35/390 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+ I MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD
Sbjct: 120 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 179
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIF
Sbjct: 180 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 239
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 240 PHHENEIAQSEGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 298
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE P + R+
Sbjct: 299 YFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLE 353
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLI 302
A++ +EF A MSDD NT+ + F A K IN ++ ++ Q ++ +
Sbjct: 354 KAKE----YEEEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEV 408
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ + K EV VL GA + +QL D L R A R+
Sbjct: 409 KRIFKFMTEVIGVLEKAWEGNTGADAVEYEQLMDVILSV--------------RQACREQ 454
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K ++ +D IR L GI + D W+
Sbjct: 455 KQWALADCIRDRLAEIGITIEDSPAGARWK 484
>gi|333373148|ref|ZP_08465064.1| cysteine--tRNA ligase [Desmospora sp. 8437]
gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
Length = 462
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 220/384 (57%), Gaps = 34/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P+ ++H+ ++++ I +I+ AY EGDV++ + +YG+LSGQ +E AG RV V
Sbjct: 108 HPKATEHIPEMQEAILTLIDKGYAYEREGDVYYRALRKEDYGKLSGQSVEELNAGARVEV 167
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+ +K P DFALWK AK GE SW+SPWG GRPGWHIECSAMS YL D+H GG+DL
Sbjct: 168 NEKKETPLDFALWKKAKPGEISWESPWGRGRPGWHIECSAMSRKYLGDTLDVHAGGMDLC 227
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS A + V YW+HNG++ NEKMSKSLGN + ++ E+Y P ALR+
Sbjct: 228 FPHHENEIAQSEAWTEKPFVRYWLHNGYINMGNEKMSKSLGNVVRVHELREQYAPRALRY 287
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAED 248
FL+SAHYR+P+++S +A+ I +L+ + A++ A+ P +
Sbjct: 288 FLLSAHYRNPISFS-------HEAIRQIEGSLERFDTAVTNLHHRMGAAQEGEAEPEVRE 340
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+ L EF A M DDLNT++ ++ +A+KF N ++ + PK L++ + +
Sbjct: 341 RLASLTGEFEAAMDDDLNTANGIS-VLHEAVKFANETV--ARSVVPKGSLAMLLDWIHRF 397
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
E ILGL+ G + +++ LIEER AR +DF ++
Sbjct: 398 GGE------ILGLVTAGEEDSLAGEIE---------------ALIEERQQARAARDFKRA 436
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D IR L +GI L D + WR
Sbjct: 437 DAIRDRLAAQGIILEDTPQGVRWR 460
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/390 (43%), Positives = 225/390 (57%), Gaps = 35/390 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+ I MI +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE P + R+
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLE 347
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK--QQQLSLI 302
A++ +EF A MSDD NT+ + F A K IN ++ ++ Q ++ +
Sbjct: 348 KAKE----YEEEFEAAMSDDFNTALATSSMFGLA-KEINIYYQVVTGREGVVCQDAIAEV 402
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ + K EV VL GA + +QL D L R A R+
Sbjct: 403 KRIFKFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSV--------------RQACREQ 448
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K ++ +D IR L GI + D W+
Sbjct: 449 KQWALADCIRDRLAEIGITIEDSPAGARWK 478
>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
Length = 466
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/396 (39%), Positives = 220/396 (55%), Gaps = 36/396 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MAD+ T+ P+ ++ ++ + DMI ++N AY V+G V+F +YG+LS + +
Sbjct: 99 MADMNVKEATHHPKATEEIDGMIDMIQTLVNKGHAYAVDGTVYFKTRSFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ AG R V + K +P DF LWK K GEPSW SPWG GRPGWHIECS MS YL
Sbjct: 159 DDLEAGHREIKVNGEEGKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHIECSVMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFT 176
+ DIH GG DLIFPHHENEIAQS AC D + YWMHNG + NN KMSKSLGNFFT
Sbjct: 219 GEQIDIHAGGEDLIFPHHENEIAQS-EACNDKEFAHYWMHNGFLNINNVKMSKSLGNFFT 277
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R+I E+Y LR F++SAHYRSPLN+S ++++ + + I + L
Sbjct: 278 VREIAEKYDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTAID----RLRTLNLQ 333
Query: 237 GKTARINPAAE-DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
G T + + L ++ A M DD NT+ ++ F+ M+K
Sbjct: 334 GDTCTAEENEQMKVFDALVAKYEAAMEDDFNTADAISAIFE-----------MVKAANIH 382
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
+ S +I +E+ + +LG+ K K+ EL ++++ LI+E
Sbjct: 383 VTETSTAAFRDQILSEIVRLCDVLGI---------------KTEKKEELLDDEIQALIDE 427
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R AARK K+F+++D+IR +L KGI L D + W
Sbjct: 428 RQAARKAKNFARADEIRDELLAKGIILKDTREGVKW 463
>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
gi|149751829|gb|EDM61760.1| cysteine--tRNA ligase [Dorea longicatena DSM 13814]
Length = 468
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 221/398 (55%), Gaps = 36/398 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + DMI +I+ AY G V+++ K +YG+LS + L
Sbjct: 99 MDGMNIKPATKNPLATEEICGMVDMIQTLIDKGFAYEKNGTVYYSTRKFKDYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+GER V+ + K +P DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLRSGERSLLVSGEDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YWMHN + +N KMSKSLGNF T+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFARYWMHNAFLNIDNRKMSKSLGNFRTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I+E+Y LR F++SAHYRSPLN+S ++++ + + I + L E+
Sbjct: 279 REISEQYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIVNAADN----LKFLMENA 334
Query: 238 KTARINPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
K I A + K + F M DD NT+ + F D +K+IN++ + K+
Sbjct: 335 KAEAITDAEAENFAKTEEFVAGFEKAMDDDFNTADAVAAIF-DLVKYINTTTDAESSKEY 393
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
Q+ L+ L +LGL+ K+ E+ +ED+ +LIE
Sbjct: 394 LQKLFDLLVKLTG----------VLGLIVD---------------KKEEILDEDIEKLIE 428
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ER AARK KDF+++D IR +L KGI L D + W+
Sbjct: 429 ERQAARKAKDFARADAIRDELLEKGIILKDTREGVQWK 466
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| cysteine--tRNA ligase [Eubacterium ventriosum ATCC 27560]
Length = 470
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 233/398 (58%), Gaps = 36/398 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M DL P T P + ++ + +MI +I+ AY +G V++ K +YG+LS + +
Sbjct: 99 MHDLNIEPATTHPLATQEIDGMIEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ AG R VA + K +P DF LWK K GEPSW SPW GRPGWHIECS MS YL
Sbjct: 159 DDLEAGHRDIKVAGEESKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DLIFPHHENEIAQS AA YWMHNG + NN+KMSKSLGNFFT+
Sbjct: 219 GDEIDIHAGGEDLIFPHHENEIAQSEAANGCEFSKYWMHNGFLNINNKKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R I+E+Y LR F++SAHYRSPLN+S ++SA + + I + +S +G
Sbjct: 279 RDISEKYDLQVLRFFMLSAHYRSPLNFSDDLMESAKNGLERIITSGAKIRDIIS----NG 334
Query: 238 KTARINPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
K ++ A +++ ++ +F M DD NT++ ++ F+ +KF NS+LN +
Sbjct: 335 KDGKVTDAEAKLLDEAKEYITKFEEAMDDDCNTANAISAVFE-LVKFANSNLN---EGST 390
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL-QLI 353
K+ + E L K+ N +LG+ +L++ ++K + +ED + ++I
Sbjct: 391 KEFAAGVYEILDKLCN-------VLGI--------ILEKEEEK------VGDEDYIEEMI 429
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+RA A+K++DF+ +DQIR +L KGI L D + T W
Sbjct: 430 AKRAQAKKDRDFAMADQIRDELAAKGIVLKDTREGTKW 467
>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 469
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 229/399 (57%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
MA + LP T P + +E ++DMI ++I + AYV +G V+F V+ +YG+LS +
Sbjct: 99 MAAMNVLPATKNPLATQEIEGMEDMIGKLIKSGHAYVAKDGTVYFRVKSFKDYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP W+SPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFREIKVTGEDGKEDSNDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKS GNFFT
Sbjct: 219 LGEQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S +++A +++ I + + + ++
Sbjct: 279 VRDISEKYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNSLERILTGMDNIKTVIA----R 334
Query: 237 GKTARINPAA---EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
TA I A + L+D+F M DD NT+ ++ F+ +K N++LN
Sbjct: 335 NNTAPITDAELSNLEIAKVLKDKFADAMDDDFNTADAVSAIFE-LVKLSNTTLN------ 387
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ S +E + + N ++ + +LG++ ++ E+ + ++ LI
Sbjct: 388 ----ENSTVEYAKGLLNVIEPLCDVLGIITE---------------RKTEILDSEIEDLI 428
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ARKNKDF+ +D+IR DL KGI L D + W+
Sbjct: 429 ARRTQARKNKDFALADKIRNDLLEKGIVLEDTREGVKWK 467
>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 440
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 226/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 259 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 318
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE I K + F M+DD NT++ +T + A N + L ++ +
Sbjct: 319 ----LAE--IEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 365
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL ++++ +LI++R AR
Sbjct: 366 VIEAYVK---QLETLFDILGL----------------ELSKEELLDKEIEELIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 438
>gi|406879047|gb|EKD27781.1| hypothetical protein ACD_79C00582G0003 [uncultured bacterium]
Length = 492
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/404 (38%), Positives = 227/404 (56%), Gaps = 37/404 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L LP + +P+ + H+++I DMI +IN AY V+G+V+F + K NYG+LSG+ +
Sbjct: 109 MKALNLLPASIEPKATMHIKEIIDMIEGLINKGYAYNVDGNVYFNITKFLNYGKLSGRNI 168
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R+ D+ K+NP DFALWK +P W+SP+G GRPGWHIECSAMS YL +
Sbjct: 169 EDTELHSRIDQDANKKNPLDFALWKKHVNDDPYWESPFGKGRPGWHIECSAMSMKYLGEE 228
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A YW+HNG +T N+EKMSKSL NF TIR++
Sbjct: 229 FDIHGGGQDLIFPHHENEIAQSAAYSGKGFARYWIHNGFITVNHEKMSKSLKNFKTIREL 288
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
T Y+PL ++ +L+S HYRSPL+++ + + ++ +F I TL ++ L
Sbjct: 289 TAVYNPLNIKFYLLSTHYRSPLDFNDNLIKNCAEGLFKIENTLSRAKLVLEE-------- 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ D KL +F M DD+NT L+ F + L +K+ +++ S
Sbjct: 341 ---SSSIDNTKKLPADFIDAMCDDINTPKALSVIFNECTGLNKILEGNLPEKEAIKEKYS 397
Query: 301 LIESLRKIENEVKEVLRILGLLP-------------PGAYSEVLQQLKDKALKRAELTEE 347
LI ++ L+ILGL P GA ++ +K LK +L E+
Sbjct: 398 LIINM----------LQILGLEPEIEKMHVVPKKKWAGANEAIIALMK---LKPQKLNED 444
Query: 348 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+ +L+ R A+ K+F+ +D+IR L I + D W
Sbjct: 445 QISRLVSARGMAKIEKNFTLADEIRNYLKTLNIEIRDKADACHW 488
>gi|377821178|ref|YP_004977549.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
gi|357936013|gb|AET89572.1| cysteinyl-tRNA synthetase [Burkholderia sp. YI23]
Length = 465
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 224/388 (57%), Gaps = 44/388 (11%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVA 70
+PR +D + Q+ MI + N AY +GDV +AV K +YG+LSG+ +E+ RAGERVA
Sbjct: 113 EPRATDFIPQMLGMIDALQANGYAYHAKDGDVNYAVRKFADYGKLSGKSIEDLRAGERVA 172
Query: 71 VDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
+ K +P DF LWK AK GEP WDS WG GRPGWHIECSAM L +FDIHGGG
Sbjct: 173 ANDAKEDPLDFVLWKQAKPGEPVDSGWDSKWGRGRPGWHIECSAMGCTLLGDQFDIHGGG 232
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
+DL FPHHENEIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ E++
Sbjct: 233 MDLQFPHHENEIAQSEGATGKTFVNYWMHNGFVQIDSEKMSKSLGNFFTIREVLEKFDAE 292
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R F+ AHYRSPLNYS + +D A +A+ +Y L+D E + A+
Sbjct: 293 VVRFFIARAHYRSPLNYSDVHIDDAKNALTRLYTALKDVEPDNQQLDWNEANAQ------ 346
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F + M+DD NT ++ F + S +N + +Q
Sbjct: 347 --------RFQSAMNDDFNTPVAVSVLFD-----LASEVNRTRDSALARQ---------- 383
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+KE+ +LGLL P A+ LQQ + LT +++ I ER AA++ K++
Sbjct: 384 ----LKELAGVLGLLQREPRAF---LQQAGGTGSQEG-LTPQEIEAKIAERIAAKQAKNY 435
Query: 366 SKSDQIRADLTRKGIALMDM-GKETIWR 392
+++D+IRA+L GIAL D G T WR
Sbjct: 436 AEADRIRAELLEAGIALEDKPGGSTEWR 463
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53.1|SYC_MARMS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 225/384 (58%), Gaps = 35/384 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P+ ++ M++I DM+ +I+ AY GDV++ K +YG+L+ ++LE+ AG
Sbjct: 108 PDREPKATEFMQEIIDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ V+ K +PADF LWK AKAGE SW SPWG GRPGWHIECSAMS + L S FDIHGGG
Sbjct: 168 RIDVEVAKEHPADFVLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS AA V+YWMH G V NNEKMSKSLGNFFT+R + +++P
Sbjct: 228 PDLKFPHHENEIAQSEAATGKEYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLAKFNPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+ ++S+ YRS ++YS L A A+ +Y L+ +VA S P
Sbjct: 288 VVRYLMVSSQYRSAIDYSDQSLLEAKVALERLYTALRQQQVAES----------FEPTV- 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT+ ++ F+ + LN K K + SL+ +
Sbjct: 337 -----FTERFEEAMKDDFNTAVAVSVLFE-----LVRELN--KAKTEDANKASLLAA--- 381
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
E++ + +LGLL Y + L++ + L E + LI+ER ARK+K+F++
Sbjct: 382 ---ELRSLAELLGLL----YQDPEYFLQNSTVSEG-LGEVAIQALIDERTQARKDKNFAR 433
Query: 368 SDQIRADLTRKGIALMDMGKETIW 391
SD+IR +L +GI L+D + T W
Sbjct: 434 SDEIRDELASQGIELLDSREGTTW 457
>gi|385340928|ref|YP_005894800.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|416180165|ref|ZP_11611350.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|416185171|ref|ZP_11613345.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|416193715|ref|ZP_11617271.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|416209140|ref|ZP_11621220.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|421543337|ref|ZP_15989432.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|433468080|ref|ZP_20425527.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|433470229|ref|ZP_20427634.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|433493523|ref|ZP_20450604.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|433495574|ref|ZP_20452632.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|433503920|ref|ZP_20460871.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
gi|402314983|gb|EJU50550.1| cysteine--tRNA ligase [Neisseria meningitidis NM255]
gi|432200763|gb|ELK56852.1| cysteine--tRNA ligase [Neisseria meningitidis 98080]
gi|432200991|gb|ELK57078.1| cysteine--tRNA ligase [Neisseria meningitidis 87255]
gi|432225583|gb|ELK81324.1| cysteine--tRNA ligase [Neisseria meningitidis NM586]
gi|432227143|gb|ELK82855.1| cysteine--tRNA ligase [Neisseria meningitidis NM762]
gi|432238194|gb|ELK93770.1| cysteine--tRNA ligase [Neisseria meningitidis NM126]
Length = 473
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN- 341
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
T +P + + F+ M+DD +T + F+
Sbjct: 342 ------------TPPADPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 426 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+
Sbjct: 569 PPA-------------DPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 233/393 (59%), Gaps = 24/393 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L PTY+P+V++H+E+I +MI +I AY EGDV+F+VEK YG+LS ++
Sbjct: 100 MKALNIKEPTYKPKVTEHIEEIIEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKT 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG R+ +K+NP DFALWK +K GEP W+SPWG GRPGWHIECSAM+ YL
Sbjct: 160 EELIAGARIEPGEKKKNPLDFALWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DLIFPHHENEIAQS A S V YW+HNG V N EKMSKSLGNFFTI+ I
Sbjct: 220 MDIHGGGLDLIFPHHENEIAQSEAYTGKSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + LR FL+S HYRSP+++S +L A + + ++ E+ E T
Sbjct: 280 LKEFSSDVLRLFLLSTHYRSPIDFSFERLKDAERSFGRLLNFIESKEII-----EKLPTF 334
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N D N + +F + M DD NT+ L F+ + N++K K K+ ++S
Sbjct: 335 EKNSEIFDVEN-YKLQFESAMDDDFNTARALGVIFE-----LVKEANLIKDKAIKENKIS 388
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAA 359
E + +L+ +G++ +Y ++L +K K+ E E+++++ LI+ R+
Sbjct: 389 --------NKEKETILKAIGIVE--SYLKLLGFKLEK--KKQEGIEDELIKLLIDVRSEL 436
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK K F +D+IR L GI L D+ TI++
Sbjct: 437 RKRKAFDLADKIRDGLKDLGIILEDLPSGTIYK 469
>gi|406903893|gb|EKD45834.1| hypothetical protein ACD_69C00115G0004 [uncultured bacterium]
Length = 468
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 223/389 (57%), Gaps = 36/389 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L +PP ++PRV+DH+ +I DMI +I+ + AY +G DV+++V K YG LS + +
Sbjct: 103 LGNIPPDFEPRVTDHIPEIIDMIQTLIDKNFAYPTKGGDVYYSVAKFKKYGELSHKDIGG 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
G RV V K++P DF LWKAAK+ EP W SPWG GRPGWHIECSAM+ YL FD
Sbjct: 163 LLLGIRVEVSEDKQDPLDFVLWKAAKSKEPFWPSPWGNGRPGWHIECSAMAKKYLGKTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHH+NE+AQS AA V+YWMH G V +N EKMSKSLGNFFT++++ +
Sbjct: 223 IHGGGSDLQFPHHQNELAQSEAANDCPFVNYWMHIGFVQSNQEKMSKSLGNFFTLKEVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y+P LR+F++ +HYRS +NYS LD+A A+ Y +++ E T
Sbjct: 283 KYNPEVLRYFVVISHYRSQINYSQENLDNAQSALQRFYISMRSLPT------EKNITFET 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ N+ FHA M DD NT + F D + IN L ++ Q Q +L+
Sbjct: 337 D-------NQFYKNFHAAMQDDFNTPKAIAILF-DLAREIN-QLRDSSQELKAQNQCALL 387
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ L G +LQ+ + LK + E + LI R AR+N
Sbjct: 388 KHL-------------------GWSLGILQENPETFLKFG-VNIEKIETLIAARNQARQN 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
K++ ++D+IRA+LT GI L D G T W
Sbjct: 428 KNWHEADKIRAELTTMGITLEDTGAGTTW 456
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 223/391 (57%), Gaps = 37/391 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM +I D+I ++N AYV + GDV+F V+ +YG+LS Q LE
Sbjct: 103 LNLLRPDIEPTVTGHMAEIIDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV VD KRNP DFALWK+AK GEPSW SPWG GRPGWHIECSAM+ +L FD
Sbjct: 163 LQSGARVEVDESKRNPMDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENE+AQSC A + V+YW+H+G V N EKMSKSL NFFTIR++ +
Sbjct: 223 IHGGGSDLMFPHHENEVAQSCCAHDTNYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y ++R+FL+S+HYRS LNYS L+ A A+ +Y L+ +
Sbjct: 283 QYQAESVRYFLLSSHYRSQLNYSEENLNQAHAALERLYTALRG----------------V 326
Query: 243 NPAAE-DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
PA E + N F A M+DD NT+ L F + LN+ K+ +Q L
Sbjct: 327 TPATELNLDNDHVARFQAAMNDDFNTAEALPVLFD-----LARELNITKEDGESEQAAQL 381
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+R + ++GLL + + D + + E LI+ R AR
Sbjct: 382 AGLMRYLGG-------VMGLLEQAPEAFLQGGGDDDEVAKIE-------GLIKARNDARA 427
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+KD++ +D R +LT GI L D T WR
Sbjct: 428 SKDWAAADAARDELTAMGIVLEDGAGGTSWR 458
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 227/394 (57%), Gaps = 43/394 (10%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS H+ I MI+ +I+ AY ++GDV+F+VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSTHIPDILKMISTLIDKGFAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK+NP DFALWKAAK GEP W+SPWG GRPGWHIECSAMS YL +FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233
Query: 133 PHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
PHHENEIAQS C+ S V YW+HNG +T N+EKMSKSL NFF ++ I E+Y P ALR
Sbjct: 234 PHHENEIAQSEGCSGHHPS-VKYWLHNGFITINSEKMSKSLNNFFLVKDILEQYSPDALR 292
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQT------LQDCEVALSPFQEHGKTARINP 244
+FL+S HYRSPL++S +L+ A+ ++ + L+ CE P + R+
Sbjct: 293 YFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAG--PCDD---AQRLLE 347
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A++ +EF MSDD NT+ + F A +N+ + ++ + E+
Sbjct: 348 KAKE----YEEEFEVAMSDDFNTALATSSMFGLA-----KEINIYYQAVTGREGVVCQEA 398
Query: 305 LRKIENEVKEVLRILGLLP------PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +++ K + ++G+L GA + +QL D L R A
Sbjct: 399 IAEVKRIFKFMTEVIGVLEKAWEGNTGADAVEYEQLMDVILSV--------------RQA 444
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ K ++ +D IR L GI + D W+
Sbjct: 445 CREQKQWALADCIRDRLAEIGITIEDSPTGARWK 478
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 220/406 (54%), Gaps = 54/406 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 329 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 388
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 389 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFD 448
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 449 IHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEK 508
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y P +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 509 MSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 568
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A +P + + F+ M+DD +T + F+
Sbjct: 569 PPA-------------DPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFE---------- 605
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K L L+ + I+GLL +E LQ L+
Sbjct: 606 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDP-TEFLQ----GGAASDGLSN 651
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 652 EEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDNAGGTTWR 697
>gi|358066738|ref|ZP_09153228.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
gi|356695009|gb|EHI56660.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
Length = 469
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 231/400 (57%), Gaps = 35/400 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
MAD+ +P T P + ++ ++DMI +I AYV +G V+F VE +YGRLS +
Sbjct: 99 MADMNIMPATKHPLATQEIDGMEDMIKTLIEKKHAYVAKDGTVYFDVESFKDYGRLSNKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K++PADF LWK K GEP WDSPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFRELQVTGEESKKSPADFVLWKPKKEGEPYWDSPWSKGRPGWHIECSVMSRKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS ++ ++WMHN + +N+KMSKSLGNFFT
Sbjct: 219 LGVQIDIHGGGEDLIFPHHENEIAQSESSSGMKFANFWMHNAFLNIDNKKMSKSLGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+RQI E+Y ALR F++SAHYR+PLN+S+ ++S+ +A+ I +++ + L Q
Sbjct: 279 VRQIGEKYDLQALRFFMLSAHYRNPLNFSMDLMESSKNALDRIITSVERLDEFL--LQSS 336
Query: 237 GKTA-RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
A + D + KL+++F M DD NT+ ++ F+ ++ NS+ + K
Sbjct: 337 RDAADDMEKQNLDRLLKLKNKFEVFMDDDFNTADAISTVFE-IVRLANSTADENSSK--- 392
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT-EEDVLQLIE 354
E + + + + +LG++ KR +L+ +E+V LIE
Sbjct: 393 -------EYINALHEAIDTLCNVLGIIT----------------KRKQLSIDEEVEALIE 429
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
+R ARKNKD+ ++D+IR L GI L D + W+
Sbjct: 430 KRQEARKNKDYKQADEIRNRLLSMGIVLEDTREGVKWKKA 469
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 221/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNILRPDFEPRATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ ++ RD M DD NT + L+ F+ A LN LK + +
Sbjct: 334 --GGENFVDAFRDA----MDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A +++V + LI++R A
Sbjct: 375 AKANGLAARLRELAGILGLL----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R LT GI L D T WR
Sbjct: 425 RAAKDWPAADAARNALTEMGIVLEDGPNGTTWR 457
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 224/391 (57%), Gaps = 44/391 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR +D + Q+ MI + N AY +GDV +AV K YG+LSG+ LE+ RAGE
Sbjct: 110 PDIEPRATDFIPQMLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K +P DF LWK +KAGEP+ WDS +G GRPGWHIECSAM L FDIH
Sbjct: 170 RVAANDAKEDPLDFVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y
Sbjct: 230 GGGQDLQFPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F+ AHYRSPLNYS + +D A +A+ +Y L D ++P +
Sbjct: 290 DAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALTD----VAP----------DG 335
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
AA D F A M+DD NT ++ F+ L + + + +L
Sbjct: 336 AALDWNEAHAQRFQAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQ 383
Query: 305 LRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR + +LGLL P AY LQQ A++ A L + I ERAAA++
Sbjct: 384 LRSLGA-------VLGLLGREPRAY---LQQAAGAAVEGA-LEPAAIEAKIAERAAAKQA 432
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
KD++ +D+IRA+L G+AL D G T WR
Sbjct: 433 KDYAAADRIRAELLEAGVALEDKPGGLTEWR 463
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6.1|SYC_HAES2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 222/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q L
Sbjct: 103 LNVLRPDFEPRATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FD
Sbjct: 163 LQAGARVEISEIKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGADLMFPHHENEIAQSCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS LD A A+ +Y L+ + + F A+
Sbjct: 283 HYDAESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQF 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M+DD NT + ++ F+ A +N L K + K L
Sbjct: 343 TEA---------------MNDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLA 381
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR E+ ILGLL + LQ D AE+ + + +LI++R AR+
Sbjct: 382 ARLR-------ELASILGLLDQDP-EDFLQAGSDD----AEIAK--IEELIKQRNDARQA 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++++D R +LT G+ L D T+WR
Sbjct: 428 KDWARADAARNELTTMGVILEDSSNGTMWR 457
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 222/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNILRPDFEPRATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL+SAHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYDAESVRYFLLSAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 334 --GGENFV----DTFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ + ++E+ ILGLL QL + +A +++V + LI++R A
Sbjct: 375 DKANGLAARLRELAGILGLL----------QLDPEQFLQAGSDDDEVAKIEGLIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD+ +D R LT+ GI L D T WR
Sbjct: 425 RAAKDWPAADAARNALTQMGIVLEDGLNGTTWR 457
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7.1|SYC_ALKOO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 228/384 (59%), Gaps = 34/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P+V+++M +I + +++ AY GDV+F V K YG+LS Q LE+ +AG R+ +
Sbjct: 110 HPKVTENMAEIIAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEI 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+ K+NP DFALWK+AKAGEPSW+SPWG GRPGWHIECSAM+ YL DIHGGG DL+
Sbjct: 170 NEYKKNPLDFALWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLV 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS A +YW+H G++ +N+KMSKSL NFFT R+I+E + LR
Sbjct: 230 FPHHENEIAQSEACSGKKFANYWLHVGYLNVDNKKMSKSLNNFFTPREISEEFDLENLRF 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
F++SAHYR+P+N+S L++A + + +Y + E L E+ ++ ++ I+
Sbjct: 290 FMLSAHYRNPINFSRDLLEAAKNGLDRLYTGKNNLEYLL----ENAAEREVSEEEKNFIH 345
Query: 252 KL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
L +++F + DD NT+ + F D ++ INS ++ K+ + L+
Sbjct: 346 GLQSFKNQFIDAVDDDFNTADGIAVIF-DLVREINSHISEKNSKKAVEASYDLL------ 398
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
E+ +LGLL + AE EE++ +LI ER ARK+K+F+ S
Sbjct: 399 ----MELTGVLGLLK----------------REAEDLEEEIERLIAERQQARKDKNFALS 438
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR DL KGI L D + WR
Sbjct: 439 DKIRDDLKEKGIVLEDTAQGVKWR 462
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/385 (44%), Positives = 220/385 (57%), Gaps = 32/385 (8%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + ++ + MI +++N AYV GDV ++V K P YG+LSG+ L++ RAGE
Sbjct: 108 PEHEPRATQYVPGMIAMIQALMDNGLAYVARSGDVCYSVHKFPGYGKLSGKSLDDLRAGE 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V K +P DF LWK+AK GEP WDSPWG GRPGWHIECS MS L FDIHGGG
Sbjct: 168 RVDVAVGKDDPLDFVLWKSAKPGEPQWDSPWGQGRPGWHIECSVMSDALLGEHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS +V+YW+HNG V +NEKMSKSLGNFFTIR++ ERY
Sbjct: 228 ADLQFPHHENEIAQSEGTHGHQHVNYWIHNGFVRVDNEKMSKSLGNFFTIREVLERYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R F++ AHYRSPLNYS LD A A+ +Y L++ SP HG A
Sbjct: 288 VVRFFILRAHYRSPLNYSDQHLDDAKGALTRLYTALKNVPPHPSPLTPHG-------VAI 340
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
D + F A M DD NT+ + F A N K KQ L LR
Sbjct: 341 DWHDPYAAAFKAAMEDDFNTAEAVAVLFDLA--------NEANKTHDKQ----LASLLRT 388
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ +LGLL G SE LQ + T E + Q I R AA+K KD++
Sbjct: 389 LGG-------VLGLLQRGP-SEFLQ----GGAGESGCTPEQIEQRIAARIAAKKAKDYAA 436
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR +L +G+ L D + T+WR
Sbjct: 437 ADRIRKELLDQGVVLEDTPQGTVWR 461
>gi|406894538|gb|EKD39329.1| hypothetical protein ACD_75C00439G0007 [uncultured bacterium]
Length = 490
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 217/383 (56%), Gaps = 6/383 (1%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGER 68
P +P+ ++H+ ++ D+I +++ AY DV++ V+ P YG+LS + + +AG R
Sbjct: 109 PDIEPKATEHITEMIDLIGELVGKGKAYPSGNDVYYVVDSFPGYGKLSKRNPADMQAGAR 168
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
++V+ +KRNP DF LWK +K GEP+W SPWGPGRPGWHIECSAMS YL FDIHGGG
Sbjct: 169 ISVNEQKRNPMDFVLWKGSKPGEPTWASPWGPGRPGWHIECSAMSRKYLGETFDIHGGGQ 228
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS A + W+H+G VT +EKMSKSLGNF TIR I YHP
Sbjct: 229 DLIFPHHENEIAQSEGANGKPFATTWIHHGFVTIRDEKMSKSLGNFLTIRDILSHYHPEI 288
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
LR F+ S HYR+PL++S + A+ + +Y+ L + S ++ + +
Sbjct: 289 LRFFIFSTHYRNPLDFSESAMQDATAGLERLYECLAAVDRLDSGKRDSALPSVLTENDLR 348
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
+ + F M +D NT+ G F D +K S+N + +K P I+ L+
Sbjct: 349 QLKGMETRFQQAMDNDFNTAQA-QGVFFDTVK----SINRICRKLPATPSAGDIQFLKNG 403
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
++++ I+G+L A + L K+K + L + LI ER R K++++
Sbjct: 404 AETLRKLADIMGILREDA-NTFLAAGKNKKISEGGLNVAAIETLIAERYECRLAKNWARG 462
Query: 369 DQIRADLTRKGIALMDMGKETIW 391
D+IR L + I L D T W
Sbjct: 463 DEIRDLLLAQNIELKDGPAGTTW 485
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 221/405 (54%), Gaps = 54/405 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDVEPKATENIPQMIAMIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR + ++Y P +R F++ AHYRSPLNYS LD A +A+ +Y TL +
Sbjct: 283 MSKSLGNFFTIRDVLKQYDPEIVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLAN- 341
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
V FQ + A D + F A M+DD +T + F+
Sbjct: 342 -VPPVEFQ-------VASEANDYTRR----FFAAMNDDFDTVQAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE 346
L + K Q L L+ + + GLL +E LQ L+
Sbjct: 380 --LAGEANKTQSAELSGCLKALAGTI-------GLLQRNP-TEFLQ----GGATANGLSN 425
Query: 347 EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
E++ LI R AR +K++++SD+IR L +GI L D T W
Sbjct: 426 EEIEALIARRKQARADKNWAESDRIRDLLAEQGITLRDGADGTSW 470
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 225/395 (56%), Gaps = 35/395 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L T P+ ++ + + +M+ +I AY V G V+F K +YG+LS + +
Sbjct: 99 MAALNVREATTHPKATEEIPDMIEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+G R V+ K +P DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+
Sbjct: 159 DDLRSGNRDLLVSGVDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYI 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
DIH GG DL+FPHHENEIAQS AA YWMHNG + NNEKMSKSLGNFFT+
Sbjct: 219 GDVIDIHAGGEDLVFPHHENEIAQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y +R F++SAHYRSPLN+S ++++ + + I T D ++S G
Sbjct: 279 REIAEKYPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERIL-TAVDRLKSIS-----G 332
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
++ A D ++ ++ A M DDLNT+ ++ F+ +K+ N +N+ ++
Sbjct: 333 TEGEVDKAVADEMDAFVKKYEAAMDDDLNTADAISVIFE-LVKYAN--VNVTEESTKATV 389
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+L L N V ++ ILG++ K+ E+ + D+ LIEER
Sbjct: 390 ELVL--------NTVTKLCDILGIITE---------------KKKEILDSDIEALIEERQ 426
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK K+F+++D+IR L+ GI L D + W+
Sbjct: 427 AARKAKNFARADEIRDQLSDMGIILEDTREGVKWK 461
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 221/391 (56%), Gaps = 34/391 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L T+ PR ++++ I +I + AY +GDV+F YG+LS Q LE
Sbjct: 102 AGLHVREATFHPRATENIADILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ AG RV V RK +P DFALWKAAK GEPSWDSPWGPGRPGWHIECSAM+ H+L
Sbjct: 162 DLEAGARVDVSERKEDPVDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTI 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIH GG DLIFPHHENEIAQS A YWMHNG++ +N KMSKSLGNFFT+R++
Sbjct: 222 DIHCGGQDLIFPHHENEIAQSECANDAPFAHYWMHNGYINIDNRKMSKSLGNFFTVREVA 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL-SPFQEHGKTA 240
+Y +R ++SA YR+P+N+S ++ + A+ +Y+ C AL ++ G+T
Sbjct: 282 AKYGYEPIRFLMLSAQYRTPINFSDEIMEQSVAALDRLYR----CREALKDALRQAGET- 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA ++ +++F A M DDLNT+ L F+ +K IN+ + + +
Sbjct: 337 ---PADSAAVSAWQEKFDAAMDDDLNTADALAVLFE-LVKEINTRV---------AEGTA 383
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ L+ +LGL L + K++ L + +V LIE+R AR
Sbjct: 384 GADWLKGAAGLFGTFCDVLGL---------LYERKERTL------DAEVEVLIEKRRQAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
K KDF +D IR +L+ KGI L D + W
Sbjct: 429 KAKDFKTADAIRDELSAKGIVLKDTPQGVKW 459
>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
gi|61216207|sp|Q6MKR7.1|SYC_BDEBA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
Length = 482
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 221/393 (56%), Gaps = 16/393 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
A L P P+V++HM+ I+ M+ +++ AY +GDV +++E +YG+LSG+
Sbjct: 100 FASLGLRPHDMNPKVTEHMDDIRSMVESLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNT 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AG RV VD +KRNP DFALWKAAK GE SW SPWGPGRPGWHIECSAM + +
Sbjct: 160 DDLLAGARVEVDEKKRNPMDFALWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQ 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DLIFPHHENEIAQS + V YWMHN + +KMSKSLGN T+R+
Sbjct: 220 IDIHGGGMDLIFPHHENEIAQSEGCTGKAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREF 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP--FQEHGK 238
E Y+ + ++SAHYR+ ++ ++ A + +Y L E L+P QE
Sbjct: 280 LEMYNAEIYKWMILSAHYRTLSDFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAA 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
A+I +D K+ + M+ D T F+ +F N+ + K P Q
Sbjct: 340 FAKIT---QDAWKKVEEA----MNHDFGTPDAFAAMFEVVRQF-NAQVRRGMKANPAIQG 391
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+L N V+++ ++ L A++ L +L D LK+ L V L+ ER
Sbjct: 392 KAL-----AFHNFVRKMGSMMSLFQEPAHA-FLIKLDDMLLKKMNLERSAVDALVAERGE 445
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR KDF+KSD++RA +T GI++ D + + W
Sbjct: 446 ARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|403059410|ref|YP_006647627.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806736|gb|AFR04374.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 461
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 216/396 (54%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNILRPDAEPRATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEITEVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A S V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ + + + HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASAAA---HGG---- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M DD NT + F A +N L K + Q
Sbjct: 336 ------------DEFEARFREAMDDDFNTPEAYSVLFDMA-----REVNRL-KTEDVQAA 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L +LRK+ +LGLL P + + Q+ D+ +K E LI++R
Sbjct: 378 NQLASALRKLSG-------VLGLLEQDPEQFLQNGAQVDDEEVKEIE-------ALIQQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD++ +DQ R L GI L D + TIWR
Sbjct: 424 KDARAAKDWALADQARDRLNDMGIVLEDGPQGTIWR 459
>gi|390456401|ref|ZP_10241929.1| cysteinyl-tRNA ligase [Paenibacillus peoriae KCTC 3763]
Length = 467
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 227/392 (57%), Gaps = 27/392 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L + PRV++ ME I D I ++++ D AY +GDVF+ +K +YG+LSGQ L
Sbjct: 101 LTGLNVPAASINPRVTESMELIIDFIKELVDKDYAYENDGDVFYRTKKFKDYGQLSGQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ VD RK N DF LWKAAK GE W SPWG GRPGWHIECSAM+ HYL
Sbjct: 161 EELQFGIRIHVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E AQS A YWMHNG++ +NEKMSKSLGN ++ +
Sbjct: 221 LDIHGGGQDLQFPHHECECAQSEAITGKPLARYWMHNGYIRIDNEKMSKSLGNGILVKDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
R+ P ALR+F++S HYR+PLNY+ + A ++V I + + + L+ + +
Sbjct: 281 RARHKPEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALKGDE-- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ + ++ + +F +M DD NT +T F+ +++ + ++L++ Q +L
Sbjct: 339 EVSAELQTKLDGILQQFGEKMDDDFNTPDAITAVFE----WVSEANHLLQRDVVNQAEL- 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +VLRI YSE +++L D +++ QLI ER AR
Sbjct: 394 --KAVLHTFYSMNKVLRI--------YSEPVEELLD----------DEIEQLIAERVEAR 433
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K++ ++D+IR L KGI L D + WR
Sbjct: 434 KTKNWGRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|417839754|ref|ZP_12485924.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
gi|341951855|gb|EGT78407.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19107]
Length = 459
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTVQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVATFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQSGSDDDEVAKIEALIKQRNDAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 AAKDWSAADAARNELTAMGIVLEDGPNGTTWR 457
>gi|443470479|ref|ZP_21060579.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|443473065|ref|ZP_21063090.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442900156|gb|ELS26408.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
gi|442903628|gb|ELS28919.1| Cysteinyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
Length = 462
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 217/394 (55%), Gaps = 40/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H+ + +MI +I+ AY GDV++ V + YG+LS +R+
Sbjct: 103 ARLSVLRPDIEPRATGHIAGMHEMIQTLIDKGFAYAPGNGDVYYRVGRFEGYGKLSRRRI 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ + G R+ VD K +P DF LWK AK GEPSW+SPWGPGRPGWHIECS MS L
Sbjct: 163 DELKIGARIEVDESKEDPLDFVLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGET 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA WMH G V + EKMSKSLGNFFTIR++
Sbjct: 223 FDIHGGGPDLVFPHHENEIAQSEAATGKLYAKAWMHAGAVRVDGEKMSKSLGNFFTIREV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ A++P A
Sbjct: 283 LEKYHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLP-AVAPAGGEAFVA 341
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F A M DD N+ F+ + +N L++
Sbjct: 342 R---------------FGAAMDDDFNSPEACAVLFE-----MIREVNRLREVD------- 374
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++ + ++K + +LG+L P A+ L+ A + + E D L I+ R A
Sbjct: 375 -VQVAAGLAAQLKSMAAVLGVLQLEPDAF------LQAGAAGKVDAAEVDAL--IQARLA 425
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR LT G+ L D T WR
Sbjct: 426 ARAEKNWAESDRIRDRLTAMGVVLEDGKGGTTWR 459
>gi|423692284|ref|ZP_17666804.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
gi|388002211|gb|EIK63540.1| cysteine--tRNA ligase [Pseudomonas fluorescens SS101]
Length = 460
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 215/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKA K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRETD------- 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I++ + +KE+ +LG+L E L+ A R + E D LI+ R AAR
Sbjct: 373 -IDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 SNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|395649608|ref|ZP_10437458.1| cysteinyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 462
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 217/392 (55%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGPGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + TE D LI+ R AAR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDATEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 VNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|375310827|ref|ZP_09776092.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
gi|375077195|gb|EHS55438.1| translation initiation factor if-1 [Paenibacillus sp. Aloe-11]
Length = 467
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 226/392 (57%), Gaps = 27/392 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L + PRV++ ME I D I ++++ AY +GDVF+ +K +YG+LSGQ L
Sbjct: 101 LTGLNVPAASINPRVTESMELIVDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ VD RK N DF LWKAAK GE W SPWG GRPGWHIECSAM+ HYL
Sbjct: 161 EELQFGIRIHVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E AQS A YWMHNG++ +NEKMSKSLGN ++ +
Sbjct: 221 LDIHGGGQDLQFPHHECECAQSEAITGKPLARYWMHNGYIRIDNEKMSKSLGNGILVKDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
R+ P ALR+F++S HYR+PLNY+ + A ++V I + + + L+ + +
Sbjct: 281 RARHKPEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALKGNE-- 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ + ++ + +F +M DD NT +T F+ +++ + ++L++ Q +L
Sbjct: 339 EVSAGLQTKLDGILQQFGEKMDDDFNTPDAITAVFE----WVSEANHLLQRDVVNQAEL- 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + + +VLRI YSE + EL ++++ QLI ER AR
Sbjct: 394 --QAVLHTFDSMNKVLRI--------YSE----------PKEELLDDEIEQLIAERVEAR 433
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K++ ++D+IR L KGI L D + WR
Sbjct: 434 KTKNWGRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|419845824|ref|ZP_14369087.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
gi|386414862|gb|EIJ29404.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK2019]
Length = 477
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q L+
Sbjct: 121 LNVLRPDFEPRATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQ 180
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 181 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFD 240
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 241 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 300
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 301 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 351
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A +N LK +
Sbjct: 352 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----REINKLKTEYA-------- 392
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ +LGL LQQ +K L+ +E + LI++R AR
Sbjct: 393 EKANGLAARLRELAGVLGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 443
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 444 AAKDWTAADAARNELTAMGIVLEDGSNGTTWR 475
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 222/392 (56%), Gaps = 28/392 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L LPPT PR ++H+ ++ +I ++++N AY D+FF V + YG+LS + L
Sbjct: 100 MAALYVLPPTIAPRATEHLPEMIALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKAL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ ++G RV V+ K NP DF LWK K GEPSW++ +G GRPGWHIECSAM +L
Sbjct: 160 EDLQSGSRVEVNPLKENPLDFVLWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRV 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A + YW+HNG V NNEKMSKSLGNFFTI++I
Sbjct: 220 FDIHGGGKDLIFPHHENEIAQSQAGYGCAPARYWIHNGFVNINNEKMSKSLGNFFTIKEI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y P LR FL HYRSP+++ + A A+ +Y+ L++ F+ H T
Sbjct: 280 LQHYDPEVLRLFLAQTHYRSPIDFCEENMTMARQALEKLYRFLEN-------FENHEDT- 331
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R + + ++ + +F M DD N++ L F+ ++ L K P
Sbjct: 332 RTSDSIAPVLSDITRKFEEAMDDDFNSALALASLFE--------GVHTLNKLNPSSAD-- 381
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + + +VL I LP ++ ++L+ +++ IE R AAR
Sbjct: 382 -AKGIYDTYCRLGDVLGIFQSLPSQWFARQ---------STSQLSADEIAARIEARNAAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++KDF+ +D+IR +L G+ + D + T WR
Sbjct: 432 RDKDFATADRIRDELLENGVEIKDSKEGTSWR 463
>gi|423399363|ref|ZP_17376561.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|423409861|ref|ZP_17387010.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
gi|401644463|gb|EJS62153.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-1]
gi|401652401|gb|EJS69958.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-3]
Length = 465
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MEKFQSAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYIK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 223/386 (57%), Gaps = 25/386 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM++I M+ +I+ AYV++ DV+++VEK +YG LSG+ L++ AG R+ VD
Sbjct: 114 PRVSEHMDEIIHMVQTLIDKGYAYVIDHDVYYSVEKFNDYGELSGRSLDDMMAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWK AK GEPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIF
Sbjct: 174 DRKHNPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSNKYLGDTFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCA-ACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A + V YW+HNG +T N+EKMSKSL NFF ++ + E Y P ALR
Sbjct: 234 PHHENEIAQSEAFTGKKPMVKYWLHNGFITINSEKMSKSLNNFFLVKDVLEHYSPDALRF 293
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
FLIS HYRSPL++S +L+ + ++ + T D + L K+ E +
Sbjct: 294 FLISNHYRSPLDFSDERLEEMTRSLERL-GTAIDNVLELLAMPAGAKSPEAQQLLETA-H 351
Query: 252 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 311
K + F M DD NT+ + + A D K +N N + +L +E
Sbjct: 352 KDEEAFENAMCDDFNTA-LASAAMFDLAKNVNIFKNAVVNNGVPVDSAAL--------SE 402
Query: 312 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTE----EDVLQ-LIEERAAARKNKDFS 366
VK V + ++++L L+D+ + E +D++Q +++ R R K ++
Sbjct: 403 VKRVFK--------TFTDILGILEDRWTGKKEDASSKDYDDLMQAILDIRQECRAQKQYA 454
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D IR L GI + D + W+
Sbjct: 455 LADAIRDKLAALGITIEDSPQGARWK 480
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 226/393 (57%), Gaps = 43/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ +I +++ +++ + AYV + GDV F V+ +YG+LSGQ LE
Sbjct: 103 LGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTAR 241
Y +R+FL+S HYRS LNYS L A A+ +Y L+D E A + E + AR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPEAAAAGGDE--QVAR 340
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
A M DD NT + F D ++ IN + K + +++
Sbjct: 341 FKEA---------------MDDDFNTPEAYSALF-DLVREIN---------RQKGEDMAV 375
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
L ++E+ +LG +LQQ D LK E +E ++ +LI ER A
Sbjct: 376 AAGLGA---RLRELGAVLG---------ILQQDPDAFLKGDEADDEVAEIERLITERNQA 423
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K+++ +D RA LT GI L D +T WR
Sbjct: 424 RADKNWAAADAARARLTEMGIVLEDSAGKTSWR 456
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429727475|ref|ZP_19262243.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|429152244|gb|EKX95075.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius VPI 4330]
Length = 467
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 219/385 (56%), Gaps = 29/385 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+V+D++++I I +++ AY GDV F + YG+LS Q +E G R+
Sbjct: 108 TVHPQVTDNIKEIISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD +K +P DF LWKA K GEP W SPWG GRPGWHIECS MS+ YL + DIH GG D
Sbjct: 168 DVDDKKEDPLDFVLWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNV--SYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
L FPHHENEIAQS C++ +V +YWMHNG++ + EKMSKSLGNFFT+R+I E+Y
Sbjct: 228 LQFPHHENEIAQS--ECRNGHVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLG 285
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R FL+S HYR+P+N+S LD A + + + E +S E K +
Sbjct: 286 LVRFFLLSTHYRNPVNFSDTILDQAKAGLERLTNARDNAEFMMSKL-EDTKMSPEETGLV 344
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
D +N + +F M DDLNTS ++ F+ A KF+N+++ K+ + L
Sbjct: 345 DELNSYKTKFIEAMDDDLNTSDAISAIFELA-KFMNTNIKDTSSKEFIGLNIDLF----- 398
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
NE+ VL I +K+++ + V ++I +RA A+KNKDF+
Sbjct: 399 --NELTGVLNI----------------ANKSVEENDDLARTVEEMIAKRAEAKKNKDFAL 440
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D+IR +L GI + D + W+
Sbjct: 441 ADKIREELLEMGIVIEDTRQGVKWK 465
>gi|419801786|ref|ZP_14327000.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385193165|gb|EIF40546.1| cysteine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 459
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q L
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLNQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK ++
Sbjct: 334 --GGENFVEAFREA----MDDDFNTPNALSVLFEMA-----REINKLKTEEA-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELAGILGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 426 AAKDWTAADAARNELTAMGIVLEDGANGTTWR 457
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 223/388 (57%), Gaps = 41/388 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I+ AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATEFIAEIIELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V+S KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVESAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y P
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLDHYDPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A A+ +Y +L+ ++ P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARSALERLYTSLRGLDLDAEP-----------TGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ-QQLSLIESLR 306
+ + + F A M+DD NT + F A +N LK Q QL +
Sbjct: 337 EYVTR----FTAAMNDDFNTPEAYSVLFDMA-----REINRLKTVDLGQASQLGAL---- 383
Query: 307 KIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
++E+ ++G+L P A+ LK A E+ E + LI+ R +R +KD
Sbjct: 384 -----MRELADVIGILHQDPEAF------LKGDAGDNDEVAE--IEALIKLRNDSRASKD 430
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
++ +D R LT GI L D + T WR
Sbjct: 431 WANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|409202160|ref|ZP_11230363.1| cysteinyl-tRNA synthetase [Pseudoalteromonas flavipulchra JG1]
Length = 459
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/396 (41%), Positives = 218/396 (55%), Gaps = 48/396 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L LP +P V+ HM++I +MI ++I AYV +GDV F V YG+LS Q LE
Sbjct: 103 LNMLPADIEPTVTGHMDEIIEMIVRLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V K +P DF LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQAGARVEVAQDKDDPLDFVLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSLGNFFT+R++ +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R+FLI+ HYRS LNYS L+ A ++ IY L+ E+ + + R
Sbjct: 283 AFDRETVRYFLINGHYRSQLNYSQENLEQARSSLERIYTALRGVELVEVELKGNAYVER- 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK---QQQL 299
F M+DD NT L F+ ++ +N LK K +
Sbjct: 342 --------------FETAMNDDFNTPEALPVIFE-----LSKEVNRLKDSDAKAAGEHAF 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEER 356
L+ ++ EVL I Q ++ + E +++V Q LIE+R
Sbjct: 383 ILV--------KLAEVLGI-------------AQQDPESFLQGEQDDDEVAQIEALIEKR 421
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+AR+NKD++ +D+ R LT G+ L D +T WR
Sbjct: 422 RSARENKDWAAADEARDALTALGVVLEDSAGKTTWR 457
>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
Length = 420
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYSNLKHRMESSTDLTDHNEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 19/397 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L P+ +P+ ++H+ ++ + ++I+ AY GDV+F V YG+LSG+
Sbjct: 99 MDRLNIERPSVEPKCTEHIPEMIALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
++ +G R+A K +P DFALWKAAK GEP W+SPWG GRPGWH+ECSAMS Y
Sbjct: 159 IDELESGARIAPGEEKEDPLDFALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL FPHHENE+AQS AA +YW+HNG V N+EKMSKSLGNFFTIR
Sbjct: 219 PLDIHGGGQDLAFPHHENEVAQSEAATGKPFANYWVHNGFVQINSEKMSKSLGNFFTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQEHG 237
I ++ P LR+FL++ HYRSPL++S L+ A + IY L D E+A +++
Sbjct: 279 ILAKFLPETLRYFLLTMHYRSPLDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKK-- 336
Query: 238 KTARINPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+P E+ + +L D F M+DDLNT+ GA I + + + K
Sbjct: 337 -----SPFPEELVKELDDLEKHFAEAMADDLNTA----GALGHVFSAIRLAGRVAEDKNL 387
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
++ + + +I+ ++ + +LG+ +E L +L+D RA + V +L++
Sbjct: 388 RKSEGGR-DLFARIKADMADWASVLGIFERKP-AEFLLELRDSRAARAGIDPAKVRELLD 445
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RA ARK+KDF++SD IR +L + + D + W
Sbjct: 446 ARAQARKDKDFARSDAIRDELAAMQVEVHDTPQGATW 482
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| cysteine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 224/395 (56%), Gaps = 35/395 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L T P+ ++ + + +M+ +I D AY V G V+F K +YG+LS + +
Sbjct: 99 MAALNVREATTHPKATEEIPDMIEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+G R V+ K +P DF LWK K GEPSW SPWG GRPGWH+ECS MS Y+
Sbjct: 159 DDLRSGNRDLLVSGIDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYI 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
DIH GG DLIFPHHENEIAQS AA YWMHNG + NNEKMSKSLGNFFT+
Sbjct: 219 GDVIDIHAGGEDLIFPHHENEIAQSEAANGTEFARYWMHNGFLKINNEKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y +R F++SAHYRSPLN+S ++++ + + I + + +G
Sbjct: 279 REIAEKYPLQVIRFFMLSAHYRSPLNFSAELVEASKNGLERILTAVDRLKSI------NG 332
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
++ + D ++ ++ M DDLNT+ ++ F+ +K+ N +N+ ++
Sbjct: 333 IDGDVDKSVADEMDAFVKKYEDAMDDDLNTADAISVIFE-LVKYAN--VNVTEESSKATV 389
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+L L N ++++ ILG++ K+ E+ + D+ LIEER
Sbjct: 390 ELVL--------NTIEKLCDILGIITE---------------KKEEILDSDIEALIEERQ 426
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK K+F+++D+IR L+ GI L D + W+
Sbjct: 427 AARKAKNFARADEIRDQLSSMGIILEDTREGVKWK 461
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVETFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQDPEKFLQAGSNDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ +D R +LT GI L D T WR
Sbjct: 426 AAKDWPAADAARNELTAMGIVLEDGPNGTTWR 457
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/406 (40%), Positives = 221/406 (54%), Gaps = 37/406 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ ++H+ ++ + ++I D AY GDV+F V YG+LSG+
Sbjct: 99 MDRLGVLRADVEPKCTEHIPEMIALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
++ +G R+ K++P DFALWKAAK GEPSW+SPWGPGRPGWH+ECSAMS Y
Sbjct: 159 IDELESGARIDPGEEKQDPLDFALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL FPHHENEIAQS AA ++W+HNG V N+EKMSKSLGNFFTIR
Sbjct: 219 PLDIHGGGQDLSFPHHENEIAQSEAATGKPFANFWVHNGFVQINSEKMSKSLGNFFTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL-------SP 232
I +++ P LR+FL++ HYRSPL++S L+ A + IY L + L SP
Sbjct: 279 ILDKFLPETLRYFLLTMHYRSPLDFSFDALEEAEKGIRRIYAALAQADAELAKTSWKKSP 338
Query: 233 FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
F E TA + D I + + M DD+NT+ L F S L +
Sbjct: 339 FPEE-MTAEL-----DAIER---HWAEAMEDDMNTAGALGHVF---------SAIRLAGR 380
Query: 293 QPKQQQLSLIESLRKIENEVK-------EVLRILGLLPPGAYSEVLQQLKDKALKRAELT 345
+ + L E R +K EVL I G P G L +L+D RA +
Sbjct: 381 VTEDKTLRKAEGGRDFLLRIKADMAAWSEVLGIFGRDPAG----FLAELRDNRAARAGID 436
Query: 346 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
V L++ R AR++KDF+KSD IR +L + + D + W
Sbjct: 437 PTRVQALLDARQQARQDKDFAKSDAIRDELAAMHVEVKDTPQGATW 482
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 221/390 (56%), Gaps = 33/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV + GDV F V+ P+YG LS Q L+
Sbjct: 103 LNILRPDSEPRATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ + + +P
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSATP---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A I K R F M+DD NT + F A LN LK + +
Sbjct: 333 ---AGGEIYKSR--FCEAMNDDFNTPEAYSALFDMA-----RELNRLKTEN--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ + +++E+ ++LGLL E Q ++ AE+ + + LI++R AR++
Sbjct: 375 DAANGMAAQLRELAKVLGLLEQD--PETFLQGGAQSEDDAEVAK--IEALIKQRNDARQS 430
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +DQ R LT GI L D T WR
Sbjct: 431 KDWALADQARDALTAMGIVLEDSSAGTTWR 460
>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 420
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|187629786|sp|A6TWK5.1|SYC_ALKMQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 464
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 221/384 (57%), Gaps = 34/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P+V++++ +I I +++ + AY V GDV++ V + +YG+LS Q LE ++G R+ V
Sbjct: 110 HPKVTENVPEIIAFIQELLEKNVAYEVNGDVYYDVSRFEDYGKLSKQNLEELQSGARIEV 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+ KRN DF LWK AK GEPSW+SPWG GRPGWHIECSAM+ YL DIHGGG DL+
Sbjct: 170 NEAKRNSLDFVLWKTAKPGEPSWESPWGSGRPGWHIECSAMAKKYLGETIDIHGGGGDLV 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS A + +YW+H G++ +N+KMSKSL NFFT R+I E Y +LR
Sbjct: 230 FPHHENEIAQSEACTGKTFANYWIHVGYLNIDNKKMSKSLDNFFTPREIAEEYDLESLRF 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
F++SAHYR+P+N+S L+SA + +Y E L E+ K + ++ I+
Sbjct: 290 FMLSAHYRTPVNFSRELLESAKSGLERLYNAKNHLEHIL----ENTKVEEMKETEKEWID 345
Query: 252 KL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
L +EF+ M DD NT+ + F D ++ +N+ + K+ + ++
Sbjct: 346 SLTHYSEEFNRVMDDDFNTADGIAVIF-DLVRDMNTYITGEASKEAVKAAYGML------ 398
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
E+ +LGLL K E ++++ +LIE R AR K+F+KS
Sbjct: 399 ----VELTGVLGLLR----------------KEEESLDKEIGRLIEARQQARIEKNFTKS 438
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR L KGI L D + WR
Sbjct: 439 DEIRDYLKEKGIVLEDTSQGVKWR 462
>gi|392541321|ref|ZP_10288458.1| cysteinyl-tRNA synthetase [Pseudoalteromonas piscicida JCM 20779]
Length = 459
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 219/396 (55%), Gaps = 48/396 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L LP +P V+ HM++I +MI ++I AYV +GDV F V YG+LS Q LE
Sbjct: 103 LNMLPADIEPTVTGHMDEIIEMIARLIEKGHAYVAKDGDVLFDVSTFEQYGQLSQQDLEM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V K +P DF LWK AKAGEP+W SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQAGARVEVAQDKDDPLDFVLWKKAKAGEPAWQSPWGEGRPGWHIECSAMSSKHLGEFFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSLGNFFT+R++ +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGRYVNTWIHTGMVQVNKEKMSKSLGNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R+FLI+ HYRS LNYS L+ A ++ IY L+ E L + G
Sbjct: 283 AFDRETVRYFLINGHYRSQLNYSQENLEQARSSLERIYTALRGVE--LVEIELKG----- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK---QQQL 299
N + F M+DD NT L F+ ++ +N LK K +
Sbjct: 336 --------NAYAERFETAMNDDFNTPEALPVIFE-----LSKEVNRLKDSDAKAAGEHAF 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEER 356
L+ ++ ILG + Q ++ + E +++V Q LIE+R
Sbjct: 383 ILV-----------KLAEILG----------IAQQDPESFLQGEQDDDEVAQIEALIEKR 421
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+AR+NKD++ +D+ R LT G+ L D +T WR
Sbjct: 422 RSARENKDWAAADEARDALTALGVVLEDSAGKTTWR 457
>gi|431792448|ref|YP_007219353.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782674|gb|AGA67957.1| cysteinyl-tRNA synthetase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 477
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 220/398 (55%), Gaps = 37/398 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L + T P+ +DH+ ++ ++I + + AY VEGDV+FAV+K P+YG+LSG+ E+
Sbjct: 104 LNLMTATIHPKATDHIPEMIEIIKGLEESGLAYAVEGDVYFAVDKLPDYGKLSGRNFEDM 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV V+ RK NP DFALWK+AK GEP W+SPWG GRPGWHIEC+AMS YL + FDI
Sbjct: 164 QAGARVEVEERKHNPMDFALWKSAKPGEPFWESPWGKGRPGWHIECTAMSLKYLGAGFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQS + YWMHN +T N +KMSKSLGNFFT+R+I E
Sbjct: 224 HGGGGDLVFPHHENEIAQSEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILE 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R +L+ HYRSPL++ L A + + +++ + AL HG+
Sbjct: 284 HFSGEVIRFYLLGTHYRSPLDFDDENLQMAQKGLERLQTSIRLADEALG---RHGE---- 336
Query: 243 NPAAEDCINKL-------RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
PA E KL + EF + M DD N++ F+ K IN+ +
Sbjct: 337 KPADEANDQKLIAAAEEAQREFESAMDDDFNSALAYASLFELG-KVINAHVQAYPYGSA- 394
Query: 296 QQQLSLIESLRKIENEVKEVLRILG--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
L+K + E+ +LG L P +E + D+ + L+
Sbjct: 395 --------GLQKARATLWELADVLGFDLAHPANSAEAGNEKLDQVMDL----------LL 436
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
E RA ARK KD+ SD IR L GI L D + W
Sbjct: 437 EVRAIARKKKDWEMSDLIRDRLKDLGIVLEDTPQGARW 474
>gi|419718461|ref|ZP_14245778.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
gi|383305296|gb|EIC96664.1| cysteine--tRNA ligase [Lachnoanaerobaculum saburreum F0468]
Length = 469
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 231/399 (57%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
MA + LP T P + +E ++DMI ++I + AYV +G V+F V+ +YG+LS +
Sbjct: 99 MAAMNVLPATKNPLATQEIEGMEDMIGKLIESGHAYVAKDGTVYFRVKSFKDYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP W+SPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFREIKVTGEDGKEDSNDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKS GNFFT
Sbjct: 219 LGEQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSAGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S +++A +++ I + + + ++
Sbjct: 279 VRDISEKYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNSLERILTGMDNIKTVIA----R 334
Query: 237 GKTARINPA--AEDCINK-LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
TA I A A I K L+D+F M DD NT+ ++ F+ +K N++L+
Sbjct: 335 NNTAPITDAELANLEIAKVLKDKFADAMDDDFNTADAVSAIFE-LIKLSNTTLS------ 387
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ S +E + + N ++ + +LG++ ++ E+ + ++ LI
Sbjct: 388 ----ENSTVEYAKGLLNVIEPLCDVLGIITE---------------RKTEILDSEIEDLI 428
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R ARKNKDF+ +D+IR DL KGI L D + W+
Sbjct: 429 ARRTQARKNKDFALADKIRNDLLEKGIVLEDTREGVKWK 467
>gi|354585447|ref|ZP_09004334.1| cysteinyl-tRNA synthetase [Paenibacillus lactis 154]
gi|353188716|gb|EHB54236.1| cysteinyl-tRNA synthetase [Paenibacillus lactis 154]
Length = 468
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 217/388 (55%), Gaps = 36/388 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+D+M+ I + I +++ AY GDVFF K YG+LS Q L+ + G R+
Sbjct: 110 TLNPRVTDNMDNIIEFIQDLVDRGFAYENGGDVFFRTRKFDGYGKLSQQNLDELQFGIRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK NP DF LWKAAK GE W SPWG GRPGWHIECSAM+ YL DIHGGG D
Sbjct: 170 EVDKRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS A +YWMHNG++ NNEKMSKSLGN ++ + E+Y A+
Sbjct: 230 LQFPHHECEVAQSEALTGKPLANYWMHNGYIRINNEKMSKSLGNGVLVKDLREQYTKEAV 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL-----SPFQEHGKTARINP 244
R+F++S HYR+PLN+S ++ A ++V + + + L SP E G+ R
Sbjct: 290 RYFMLSTHYRNPLNFSEEVMNQAQNSVERLANAAANVKHRLSAAVGSPDAEAGEEIR--- 346
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
+ ++ + EFH +M DD NT +T FQ A S N L ++P L E
Sbjct: 347 ---NKMSAVLAEFHQKMQDDFNTPDAITAMFQWA-----SEANQL-LQEPSIPAADLREV 397
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
L NE+ VLRI+ E+ +E++ +LI ER ARKNK+
Sbjct: 398 LDAF-NEMNGVLRIVN------------------TGEDEMLDEEIERLIAERVEARKNKN 438
Query: 365 FSKSDQIRADLTRKGIALMDMGKETIWR 392
+ ++D+IR L KGI L D + W+
Sbjct: 439 WGRADEIRDLLAAKGIVLEDTAQGMRWK 466
>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 485
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 218/394 (55%), Gaps = 13/394 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L P ++P+ ++H++ + + +I AY GDV+F V P+YG LSG+
Sbjct: 99 MERLGVQPANFEPKATEHIQDMIGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRE 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L+ RAG R+A K +P DFALWK AK EPSW SPWG GRPGWH+ECSAMS +L
Sbjct: 159 LDTMRAGARIAPGEEKEDPLDFALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL FPHHENE AQS AA +W+HNG V EKMSKSLGNF TIR
Sbjct: 219 PLDIHGGGQDLAFPHHENERAQSLAASGKELARFWVHNGFVQVEAEKMSKSLGNFITIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I Y P LR+FL++ HYRSPL+++ +D A + +YQT Q ALS + +
Sbjct: 279 ILSYYLPEVLRYFLVTKHYRSPLDFNWEVMDEAEKGLRRLYQTRQHIAEALS--RSNWSK 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ I+ L ++ M DDLNT+ L F +N N + + + ++
Sbjct: 337 TELPSELSAEIDDLDAKWRQNMEDDLNTAGALGHVFT-----LNRLANRILEDKTWRKAE 391
Query: 300 SLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ + L +I++ + + +LGL P A+ L L+ + KR + V QLI +R
Sbjct: 392 AGGKLLERIQSIFEHIGNVLGLFQQTPDAF---LDDLRTQKAKRKGIDTSAVAQLITKRQ 448
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR+ KDF+ +D +R L GI + D + +W
Sbjct: 449 EARRAKDFTTADSVRQQLEEMGIEVQDTPQGPVW 482
>gi|365157349|ref|ZP_09353622.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
gi|363625250|gb|EHL76292.1| cysteinyl-tRNA synthetase [Bacillus smithii 7_3_47FAA]
Length = 465
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 223/394 (56%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++M+ I + I + AY V+GDV++ K +YG+LS Q ++
Sbjct: 104 LGCKRADIHPRVTENMDIIIEFIRTLEEKGYAYEVDGDVYYRTRKFKDYGKLSHQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ V +K + DFALWKAAK GE SWDSPWG GRPGWHIECSAM+ HYL DI
Sbjct: 164 KVGARIEVGEKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMARHYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALSGKTFARYWMHNGYININNEKMSKSLGNFVLVHDIIQK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P ALR F++S HYR P+NYS L++A ++ + + Q+ +H K A N
Sbjct: 284 HDPDALRFFMLSVHYRHPINYSEELLENAKTSLERLKTSYQNL--------KHRKEASTN 335
Query: 244 PAAEDC-----INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
D I KL DEF M DD NT++ ++ F+ + + ++ +++K ++
Sbjct: 336 LTENDHEWIEKIQKLHDEFVKEMDDDFNTANAISVLFELSRQ---ANYYLMEKHTSEK-- 390
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+I + K E +++ +LGL L+ E +E++ QLIE+R
Sbjct: 391 --VISAFMK---EFEDLFSVLGL----------------KLEVNEWLDEEIEQLIEKRNQ 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK ++F +D+IR L I L D + T W+
Sbjct: 430 ARKERNFQLADEIRDQLKNMNIILEDTPQGTRWK 463
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 219/393 (55%), Gaps = 36/393 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L L P +PRV+ HM+ I MI ++ AY + GDV F V +YGRLS Q
Sbjct: 101 FAALNLLEPDVEPRVTQHMDDIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE +AG RV V++ K +P DF LWK AKAGEPSWDSPWG GRPGWHIECSAM+ +L
Sbjct: 161 LEQLQAGARVDVEASKLDPLDFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGE 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQSC A Q + V+YWMH+G V ++ KMSKSLGNFFTIR
Sbjct: 221 TFDIHGGGSDLTFPHHENEIAQSCCANQTNYVNYWMHSGMVQVDDVKMSKSLGNFFTIRD 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ Y +R+FL+S+HYRS LNY+ L+ A A+ +Y L+ L+P Q
Sbjct: 281 VLNAYDAETVRYFLLSSHYRSQLNYTQDNLEQAHAALERLYTALR----GLTPEQPD--- 333
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
E+ ++F M+DD N ++ F+ ++ IN + + + QL
Sbjct: 334 -------ENLRLPYWNQFTDAMNDDFNAPEAMSVLFE-LVREINKARD---NDAERAAQL 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ + + E+ +LGLL S LQ D + E LI +R A
Sbjct: 383 AHV---------LVELADVLGLLQQSPES-FLQGGADDEVALIE-------ALIAQRNKA 425
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D+ R LT GI L D T WR
Sbjct: 426 RAEKDWAAADEARDRLTEMGIVLEDGANGTQWR 458
>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229601947|ref|YP_002864741.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|386733956|ref|YP_006207137.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|421510415|ref|ZP_15957308.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|421640503|ref|ZP_16081085.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
gi|423553976|ref|ZP_17530303.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|33301677|sp|Q81VV1.1|SYC_BACAN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216160|sp|Q63HB0.1|SYC_BACCZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|61216199|sp|Q6HPS8.1|SYC_BACHK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735045|sp|B7JK97.1|SYC_BACC0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765175|sp|C3P9N5.1|SYC_BACAA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765176|sp|C3LJ62.1|SYC_BACAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
E33L]
gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|384383808|gb|AFH81469.1| Cysteinyl-tRNA synthetase [Bacillus anthracis str. H9401]
gi|401182183|gb|EJQ89322.1| cysteinyl-tRNA synthetase [Bacillus cereus ISP3191]
gi|401819497|gb|EJT18674.1| cysteinyl-tRNA ligase [Bacillus anthracis str. UR-1]
gi|403392319|gb|EJY89573.1| cysteinyl-tRNA ligase [Bacillus anthracis str. BF1]
Length = 465
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|187629800|sp|A6LPP1.1|SYC_CLOB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 466
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 223/392 (56%), Gaps = 33/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L+ T PR ++++ I + ++I AY V+GDV+++ +K NYGRL GQ L++
Sbjct: 102 LKIERATVNPRATEYIHDIIKFVEELIEAGFAYEVDGDVYYSTKKFDNYGRLVGQNLDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R++VD RK++P DFA+WKA K GEP+W+SPWGPGRPGWHIECS M+ L DI
Sbjct: 162 QVGARISVDERKKDPMDFAVWKAQKPGEPAWESPWGPGRPGWHIECSCMAKKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG+DL FPHHENEIAQS A + +YW+H V +N+KMSKSL NFFT R++ E
Sbjct: 222 HAGGMDLRFPHHENEIAQSEALTGKTFANYWLHAAFVNVDNKKMSKSLNNFFTAREVLEE 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y A+R ++S HYR +N++ LDSA ++ + L +C L ++ ++
Sbjct: 282 YSSDAIRFLMLSGHYRIQINFTKELLDSAKSSI----ERLYNCINNLENLKDEVTKKLMD 337
Query: 244 PAAE---DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
A E ++K R++F +M DD NT+ ++ F ++ K S
Sbjct: 338 EAEEKYLKSLDKYREKFIEKMDDDFNTADAISVLF-----------DLTKDINNNVNINS 386
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
E K E+ V+E+ LG +LQ +K L E ++ +LIE+R AR
Sbjct: 387 SSELCEKAESMVRELGNPLG---------ILQDRIEKDL------ETEIQELIEKRQQAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNKDF+ +D+IR DL + I L D + W+
Sbjct: 432 KNKDFALADKIRDDLKSRNIILEDTPQGVRWK 463
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3.1|SYC_HAEIG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVETFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQDPEKFLQAGSDDDEVAKIEVLIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ +D R +LT GI L D T WR
Sbjct: 426 AAKDWPVADAARNELTAMGIVLEDGPNGTTWR 457
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 211/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I + ++I D AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + I +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSALFD-----IAREVNRLKTED--------ITAANG 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQTNDDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + TIWR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTIWR 459
>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 420
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGNGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTELTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M+DD NT++ +T + A N + L ++
Sbjct: 295 --NEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|407713995|ref|YP_006834560.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
gi|407236179|gb|AFT86378.1| cysteinyl-tRNA synthetase [Burkholderia phenoliruptrix BR3459a]
Length = 465
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 171/391 (43%), Positives = 223/391 (57%), Gaps = 44/391 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR +D + Q+ MI + N AY +GDV +AV K YG+LSG+ LE+ RAGE
Sbjct: 110 PDIEPRATDFIPQMLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K +P DF LWK +KAGEP+ WDS +G GRPGWHIECSAM L FDIH
Sbjct: 170 RVAANDAKEDPLDFVLWKQSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y
Sbjct: 230 GGGQDLQFPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F+ AHYRSPLNYS + +D A +A+ +Y L D ++P +
Sbjct: 290 DAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALTD----VAP----------DG 335
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
AA D F A M+DD NT ++ F+ L + + + +L
Sbjct: 336 AALDWNEAHAQRFQAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQ 383
Query: 305 LRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR + +LGLL P AY LQQ A++ A L + I ER AA++
Sbjct: 384 LRSLGA-------VLGLLGREPRAY---LQQAAGAAVEGA-LDPAAIEAKIAERVAAKQA 432
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
KD++ +D+IRA+L G+AL D G T WR
Sbjct: 433 KDYAAADRIRAELLEAGVALEDKPGGLTEWR 463
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|384259159|ref|YP_005403093.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|380755135|gb|AFE59526.1| cysteinyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 463
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 218/394 (55%), Gaps = 34/394 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR + H+ +I D++ ++I+ D AYV GDV F VE P+YG LS Q
Sbjct: 100 FASLNILPPDSEPRATQHIHEIIDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQD 159
Query: 60 LENNRAGERVAVDSR-KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
L+ +AG RV V++ KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L
Sbjct: 160 LDQLQAGARVEVEANVKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLG 219
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A V+ WMH+G V + EKMSKSL NFFT+R
Sbjct: 220 AHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVR 279
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + Y ++R+FL+S HYRS LNYS L A ++ +Y L+ + A +P
Sbjct: 280 DVLKYYDAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAF 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R F A M DD NT + F D + IN + K +
Sbjct: 340 VTR---------------FRAAMDDDFNTPEAYSVLF-DMARDIN---------RLKTED 374
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
LS L E++++ +LGLL + Q LK A + ++ LI++R
Sbjct: 375 LSAANGLAA---ELRQLAGVLGLLE----QDPEQFLKSGAQADNDDEVAEIEALIKQRND 427
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +KD+ +D+ R L GI L D T WR
Sbjct: 428 ARASKDWGMADKARDRLNEMGIVLEDGAAGTTWR 461
>gi|257057469|ref|YP_003135301.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256587341|gb|ACU98474.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 221/390 (56%), Gaps = 36/390 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L CLPP+ PR + H+ Q+ ++I ++I++ AY EG+V+F+V +YG+LSGQRL+
Sbjct: 102 AALGCLPPSVTPRATGHITQMIELIQRLIDSGHAYAAEGNVYFSVSTFDSYGQLSGQRLD 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ GE + KR+P DF LWKA+K GEPSW +PWG GRPGWH+ECSAM+ YL S+F
Sbjct: 162 EVQQGETQS--EGKRDPRDFTLWKASKPGEPSWPTPWGRGRPGWHLECSAMATTYLGSEF 219
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG+DL+FPHHENE AQS AA D YW+HN VT EKMSKSLGN I ++
Sbjct: 220 DIHGGGVDLVFPHHENERAQSMAAG-DGFARYWLHNAWVTLAGEKMSKSLGNVVAIPEML 278
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
RY + LR +LI HYRS + YS L ++ I Q L+ + + Q
Sbjct: 279 RRYRAVELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLRRVQSSTGEVQ------- 331
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+ ++ EF A + DDL T + ++ N++L+ K+ + +Q L
Sbjct: 332 --------VGRVPAEFAAALDDDLGTPQAFA-VLHNTVRDGNAALDSAKETEARQ----L 378
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
E++R + + +LG+ P + +Q ++ AE+ V ++EER AR
Sbjct: 379 AETVRAM-------VDVLGIDP------LSEQWAEQGGAEAEVLARLVDAMLEERQQARA 425
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIW 391
N+DF+ +D IR L GIA+ D W
Sbjct: 426 NRDFATADAIRDRLIEAGIAVEDTPNGPQW 455
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62.1|SYC_POLSQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 224/404 (55%), Gaps = 48/404 (11%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLE 61
+L + P +PR +D+++Q++ MI ++I N+ AY E GDV FAV P YG+LSG+ L+
Sbjct: 102 ELGLMHPDQEPRATDYIQQMQGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLD 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLS 118
AGERVA+ KR+P DF LWK+AK EP+ W+SPWG GRPGWHIECSAMS L
Sbjct: 162 ELNAGERVAIGGGKRDPLDFVLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLG 221
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKS 170
+ FDIHGGG DL FPHHENEIAQS A N V+YWMHNGH+ N EKMSKS
Sbjct: 222 AHFDIHGGGADLQFPHHENEIAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKS 281
Query: 171 LGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVA 229
LGNFF IR + + + P +R F++ AHYRSP+NYS QL+ A + +Y L EV
Sbjct: 282 LGNFFLIRDVLKSFDPEVVRFFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVD 341
Query: 230 LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 289
P D N F M+DD NT + F + S +N
Sbjct: 342 TVPI--------------DLQNPWAKRFADAMNDDFNTPEAIAVLFD-----LASEVNRA 382
Query: 290 KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDV 349
+ + KQ L++SL N ++ P + L+ + ++ L+ E +
Sbjct: 383 QGAE-KQMLAGLLKSLGGTLNFLQR--------DPTNF------LQAGSKDQSGLSSEQI 427
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+ I R AA++ KDF+K+D IR L +G+ L D G T WR
Sbjct: 428 EEHIAARVAAKQAKDFAKADGIRKALLEQGVVLEDKPGGITEWR 471
>gi|374298149|ref|YP_005048340.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359827643|gb|AEV70416.1| cysteinyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 467
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 227/386 (58%), Gaps = 31/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T P+ +++++ I ++I ++ + Y V+GDV+F+ +K YG+LS Q L++ G R+
Sbjct: 108 TVHPKATENIDAIIELIKKLEDKGFVYNVDGDVYFSTKKFKEYGKLSHQSLDDLELGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK++P DFA+WKA K GEP+WDSPWG GRPGWHIECSAM+ YL DIH GG D
Sbjct: 168 DVDERKQDPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L+FPHHENEIAQS AA YWMHNG + +N+KMSKS GNFFT+R+I +++ +
Sbjct: 228 LVFPHHENEIAQSEAATGKPFARYWMHNGFINVDNKKMSKSEGNFFTVREIAQKFDYEVI 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++SAHYRSP+N+S+ L+ A +++ IY +C L +EH + ++ ++
Sbjct: 288 RFFMLSAHYRSPINFSLELLEQAQNSLERIY----NCIDNLLYLREHAEDREMSEVEKEF 343
Query: 250 INK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
NK L+ +F M DD+NT+ + F D +K +NS++ K S R
Sbjct: 344 QNKLLGLKGKFIEAMDDDINTADAIAAIF-DIVKEVNSNITANSK------------SSR 390
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
I + ++R LG G +Q +DK + ++ +LI R ARK K++
Sbjct: 391 AIIDFSHSLIRELG----GVLGIAQKQKEDK-------LDSEIEELINLRQQARKEKNWK 439
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
+D+IR L GI L D + W+
Sbjct: 440 LADEIRDKLKDMGIVLEDTPQGVKWK 465
>gi|417840824|ref|ZP_12486932.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
gi|341950635|gb|EGT77222.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M19501]
Length = 459
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++A YRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAQYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGENFVEAFREA----MDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQEPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 AAKDWSAADAARNELTVMGIVLEDGPNGTTWR 457
>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 440
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 216/392 (55%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++ AY EGDV++ ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLTFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 259 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 318
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ I K + F M+DD NT++ +T + A Q L
Sbjct: 319 LVE------IEKFQLAFEEAMNDDFNTANAITELYNLA-------------NHANQYLLE 359
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
S IE VK+ + G+L L + EL +E++ LI++R AR
Sbjct: 360 EHTSKVVIEAYVKQFETLFGILGL-------------ELTKEELLDEEIEALIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 438
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Tsiankovskii-I]
Length = 465
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|433654077|ref|YP_007297785.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292266|gb|AGB18088.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 464
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 226/383 (59%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR +++++ I + + ++I+ AYV+ GDV++ K YG+LS + ++ +AG R+
Sbjct: 108 TVHPRATENIDDIINFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K+NP DF LWKAAK GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +WMH G++ NNEKMSKS NFFT+R IT +Y P L
Sbjct: 228 LIFPHHENEIAQSEAANDAEFARFWMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++++HYR+P+N+S L+ + + T+ + L + + + A ++
Sbjct: 288 RFFMLTSHYRNPINFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEK 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ + F M DD NT+ ++ F+ ++ IN++++ PK+ LIE + I
Sbjct: 347 YDEYKKRFEEAMDDDFNTADAISVLFE-MVRDINTNID---GNSPKE----LIEYILDIF 398
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
++ VL I + K+ +L ++++ +LIE+R ARK K+++++D
Sbjct: 399 LKLSSVLGI-------------------SYKKRDLLDDEIKKLIEKREEARKAKNWAEAD 439
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L ++GIAL D W+
Sbjct: 440 KIRDELKKQGIALEDTPSGVRWK 462
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
gi|187629791|sp|A7GK01.1|SYC_BACCN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 225/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV++ ++ YG+LS Q +E+
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLSFPHHENEIAQSEALTGKPFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y+ L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + + + F A M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMKEFQSAFEAAMDDDFNTANAITELYNLA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ N+++ + RILGL+ + EL ++++ LI++R AR
Sbjct: 391 VIEAYI---NQLEMLFRILGLV----------------FTKEELLDKEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ +D+IR DL + I L D + T W+
Sbjct: 432 KNRDFALADKIRDDLKERNIILEDTAQGTRWK 463
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 217/393 (55%), Gaps = 40/393 (10%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
DL L P +PR + H+ +I M+ ++I AYV +GDV F VE YG LS Q L
Sbjct: 102 DLNILRPDVEPRATQHIPEIIAMVEKLIAKGHAYVAADGDVMFDVESFSQYGALSRQNLA 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV + S K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM++ L F
Sbjct: 162 QLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGNGRPGWHIECSAMNSQELGEHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR +
Sbjct: 222 DIHGGGSDLMFPHHENEIAQSCCAHGGEYVNYWLHTGMLTIDKEKMSKSLGNFFSIRHML 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
Y +LR+F ++AHYRS L+YSV LD A A+ +Y L+ C++ ++P
Sbjct: 282 GLYDAESLRYFFLTAHYRSLLDYSVDNLDLARSALERLYTALRGCDLTVAP--------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
E I+ F M+DD NT L F+ I +N LK + P Q
Sbjct: 333 --AGGEQYISA----FETAMNDDFNTPGALAVLFE-----IAREVNKLKAEDPAQAN--- 378
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
+ +K + +LGL L+Q + LK +E ++ LI +R A
Sbjct: 379 -----GLAVRLKALAGVLGL---------LEQDPESFLKGESNADEAAEIEALIAKRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ K+++ +D++R L I L D T WR
Sbjct: 425 KAAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
Length = 420
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M+DD NT++ +T + A N + L ++
Sbjct: 295 --NEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEVLIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|398813150|ref|ZP_10571852.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
gi|398039311|gb|EJL32449.1| cysteinyl-tRNA synthetase [Brevibacillus sp. BC25]
Length = 468
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 228/400 (57%), Gaps = 41/400 (10%)
Query: 2 ADLQCL---PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQ 58
ADL+ L PP QPRV + +I + + +I AY EGDV+F + YG+LS Q
Sbjct: 99 ADLKSLNVTPPDIQPRVMQTIPEIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQ 158
Query: 59 RLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
L++ +AG RV ++ +K +P DF LWKAAK GE +WDSPWG GRPGWHIECSAM+ +L
Sbjct: 159 PLDDLQAGARVEINEKKEHPLDFVLWKAAKTGEVTWDSPWGDGRPGWHIECSAMALKFLG 218
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ DIH GG DL+FPHHENEIAQS YW+HNG + +NEKMSKSLGNF R
Sbjct: 219 EEIDIHAGGTDLVFPHHENEIAQSECFTGKVFARYWLHNGMLNIDNEKMSKSLGNFLLAR 278
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQ---DCEVALSP 232
++E++ +R F++ HYR+P+N+S ++ A++ + I Y L D A P
Sbjct: 279 DLSEKFGGQLIRFFMLQGHYRNPINFSEELIEQAANGLDRIKTAYTNLSHRLDTVRAEEP 338
Query: 233 FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+ + ARI I +LR+ F A M DD+NT++ +T F D +K N L
Sbjct: 339 NDQAQEQARI-------IGELRERFIAEMDDDINTANAITVIF-DIVKEANLYL------ 384
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ Q + E +R + + E+ +LGL E+ ++ EL + ++ L
Sbjct: 385 --RHQNVGETE-VRAYMDLLVELTEVLGL-------EIAEE--------QELLDSEIDAL 426
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
IEER ARK +DF++SD+IR L KGI L D + WR
Sbjct: 427 IEERTEARKARDFARSDEIRDLLAAKGIVLEDTPQGVRWR 466
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 220/408 (53%), Gaps = 58/408 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++++ Q+ MI +I N AY GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAGERV VD KR+P DF LWKAAKAGEP+W+SPWG GRPGWHIECSAMS + FD
Sbjct: 163 LRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQD----------------SNVSYWMHNGHVTNNNEK 166
IHGGG DL FPHHENEIAQS A S+V YW+HNG + + EK
Sbjct: 223 IHGGGADLQFPHHENEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEK 282
Query: 167 MSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC 226
MSKSLGNFFTIR++ ++Y +R F++ AHYRSPLNYS LD A A+ +Y TL++
Sbjct: 283 MSKSLGNFFTIREVLKQYDLEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 342
Query: 227 EVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSL 286
A E+ N F+A M+DD T + F+
Sbjct: 343 PAAEFDLSENA-------------NGYTRRFYAAMNDDFGTVEAVAVLFE---------- 379
Query: 287 NMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAEL 344
L + K L L+ + I+GLL P A+ L+ A L
Sbjct: 380 --LAGEVNKTNDAQLAGCLKALGG-------IIGLLQRDPTAF------LQGSAASDG-L 423
Query: 345 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ E++ LI R AR +K++++SD+IR L I L D T WR
Sbjct: 424 SNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDNAGGTTWR 471
>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|376264117|ref|YP_005116829.1| cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
gi|254765177|sp|C1ET19.1|SYC_BACC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
gi|364509917|gb|AEW53316.1| Cysteinyl-tRNA synthetase [Bacillus cereus F837/76]
Length = 465
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|386265553|ref|YP_005829045.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + F M DD NT + L+ F+ A +N LK + +
Sbjct: 334 --GGEN----FAETFREAMDDDFNTPNALSVLFEMA-----REINKLKTED--------V 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAVRLRELGAILGL---------LQQDPEKFLQAGSNDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 426 AAKDWATADAARNELTAMGIVLEDGPNGTTWR 457
>gi|433447291|ref|ZP_20410888.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|431999955|gb|ELK20862.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 465
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/400 (39%), Positives = 221/400 (55%), Gaps = 51/400 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++++ I I Q+I AY V+GDV++ + +YG+LS Q ++
Sbjct: 104 LGCKKADVHPRVTENIDTIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
++G R+ V +K +P DFALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 KSGARIEVGEKKEDPLDFALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P LR F++S HYR P+NYS L+SA L+ + A + + H + N
Sbjct: 284 VDPQVLRFFMLSVHYRHPINYSQPLLESARSG-------LERLKTAYANLK-HRLESSTN 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
D I +LR+EF M DD NT++ + F+ A KQ
Sbjct: 336 LTTNDEQWLAKIEELRNEFIREMDDDFNTANGIAVLFELA----------------KQAN 379
Query: 299 LSLIES------LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ L+E ++K + +++ +LGL +L++ EL +E++ L
Sbjct: 380 VYLMEKHTSQAVIQKFLRQFEQLFDVLGL----------------SLQQDELLDEEIEAL 423
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I++R ARKN+DF+ +D+IR +L K I L D + T WR
Sbjct: 424 IQQRIEARKNRDFALADRIRDELKAKNIILEDTPQGTRWR 463
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 224/392 (57%), Gaps = 24/392 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LP T P+ ++H+ ++ ++I +I AY V+GDV+FAV+ PNYG+LSG+ LE+
Sbjct: 104 LNILPATVHPKATEHIPEMIEIIQGLIETGLAYDVDGDVYFAVDHFPNYGKLSGRTLEDM 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ VD RK +P DFALWK AK GEPSW+SPWG GRPGWHIEC+AMS YL + FDI
Sbjct: 164 KAGARIEVDERKHHPMDFALWKKAKPGEPSWESPWGLGRPGWHIECTAMSLKYLGAGFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQ+ + YWMHN +T N EKMSKSLGNFFT R++
Sbjct: 224 HGGGGDLVFPHHENEIAQTEGYLNGQTFAHYWMHNAFLTINQEKMSKSLGNFFTTRELLA 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG--KTA 240
+ +R +L+ HYRSPL+++ L A + + +++ + AL + G +
Sbjct: 284 KNSGEVIRFYLLGTHYRSPLDFNDENLGMAQKGLERLQTSVRLAQQAL---ERTGSVRNE 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
RI + + R+ F M DD N++ F+ + ++N ++ P Q
Sbjct: 341 RIEEGLKKAAQEAREAFEKAMDDDFNSALAYAALFE-----LAKTMNGYVQEHPVSSQ-- 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + +K E+ EVL LL P +++ K + E VL++ R+ AR
Sbjct: 394 ALATAQKTLIELGEVLG-FDLLHPAQVQVENEEMLSKVM-------ELVLKI---RSKAR 442
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ KD+ SD IR +GI + D + W+
Sbjct: 443 QKKDWEMSDFIRDAFKAEGIVIEDTPQGASWK 474
>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
Length = 420
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTNHNEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 227/384 (59%), Gaps = 36/384 (9%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRV++ M+ I IT++I+ AY GDV+F K YG+LS Q L++ +AG R+ V+
Sbjct: 113 PRVTESMDDIITFITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVE 172
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+K +P DF LWK AK GE +W SPWG GRPGWHIECSAM +L DIH GG DL F
Sbjct: 173 EKKEDPLDFVLWKTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSF 232
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENEIAQS A + +YW+HNG++ +NEKMSKSL NF + I ++ P +R F
Sbjct: 233 PHHENEIAQSEALNEQRMANYWIHNGYINIDNEKMSKSLNNFILVHDIIRQFDPDVVRFF 292
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINK 252
+++AHYRSP+N+S QL++A ++ I T ++ L G++A + +
Sbjct: 293 IVNAHYRSPINFSDEQLETAKTSLERIQTTYENLTYRL------GESADLGGGQDKWFAL 346
Query: 253 LRDE---FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+R E F A M DD N+++ + F D ++ +++ + +K K+ ++E+ K
Sbjct: 347 IRKEGERFIASMDDDFNSANAVAVMF-DLVR--QANIYLTEKHTSKE----VLEAFLKQF 399
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKR-AELTEEDVLQLIEERAAARKNKDFSKS 368
+++ VL I A+KR AEL +EDV QLIEER ARK++DF+++
Sbjct: 400 DDMAFVLGI-------------------AVKRQAELLDEDVEQLIEERIQARKDRDFARA 440
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR L +GI L D + T W+
Sbjct: 441 DEIRDSLKDQGIILEDTPQGTRWK 464
>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 420
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+ +M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTGNMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 440
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 259 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 318
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 319 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 365
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 366 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 438
>gi|428218169|ref|YP_007102634.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427989951|gb|AFY70206.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 485
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 225/387 (58%), Gaps = 15/387 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L +P PR ++ +E I D+I + D AY GDV++AV+K P YG+LSG++L
Sbjct: 101 MARLNIMPADEYPRATESIEAIIDLIKALEAQDYAYAAGGDVYYAVQKFPTYGKLSGRKL 160
Query: 61 ENNRAGE--RVAV-DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
+ +AG RVAV + KR P DFALWKAAK GEP W SPWG GRPGWHIECSAM L
Sbjct: 161 ADMQAGASGRVAVGEELKRYPFDFALWKAAKPGEPFWQSPWGEGRPGWHIECSAMVRSRL 220
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL FPHHENEIAQS A YW+HNG V + EKMSKSLGNF TI
Sbjct: 221 GDQIDIHAGGADLQFPHHENEIAQSEGATHQPLARYWLHNGFVNIDGEKMSKSLGNFTTI 280
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R++ + Y P+A+R F++ +HYR P++++ +++A+ ++T++D + F +
Sbjct: 281 RELLKHYDPMAIRLFILQSHYRQPIDFTEEAINAATRG----WETIRDGLLFKHDFGDQL 336
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
R+ A + L D FH M DD NTS ++ F+ A K + + N L
Sbjct: 337 GWDRLAVALDQLDQNLLDRFHGAMDDDFNTSIAISLLFELA-KPLKAEANKLVHSGKSDL 395
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+++ + + + +VL + P A S + + A ++++ + ++++R
Sbjct: 396 ASAVLAQTWQTLSYLSDVLGFIA--DPEARSNA-----NHSNDSATVSDDQIETMVQQRC 448
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMD 384
AARK KDF+ SD++R L GI L+D
Sbjct: 449 AARKAKDFAASDRLRDQLKELGITLID 475
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 223/394 (56%), Gaps = 13/394 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +P+ ++H++++ ++ +I AY GDV+F V +YG+LSG+
Sbjct: 99 MDRLGILRADIEPKATEHIKEMIELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRN 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
+E+ +G R+ K +P DFALWK AK GEPSW SPWGPGRPGWHIECSAMS YL
Sbjct: 159 IEDLMSGARIEPGEEKEDPLDFALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPL 218
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENE AQ+ AA V YW+HNG V N+EKMSKSL NF TIR
Sbjct: 219 PFDIHGGGQDLAFPHHENERAQTEAATDKQFVRYWVHNGFVQINSEKMSKSLNNFVTIRD 278
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAV--FYIYQTLQDCEVALSPFQEHG 237
I Y P LR FLI+ HYRSPL+Y+ L+ + A+ Y+ +T + VA + +
Sbjct: 279 ILANYLPEVLRFFLITKHYRSPLDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATP 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
A I A K D M+DD+NT+ L F +K +N L K+ +Q
Sbjct: 339 LPAEIVVEATALEAKWDDS----MADDMNTAAALGHVFV-LMKIVNRILEDKTLKKSEQG 393
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +I K+ EVL + L+P S+ L QLK+ + R ++ + V ++ER
Sbjct: 394 R-DMIRHALKLFERWGEVLGLF-LMPS---SDFLTQLKESRVLRRKIDTDLVQTKLQERK 448
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR KDF++SD IR +L G+ + D + W
Sbjct: 449 EARAAKDFARSDAIRDELLALGVTIQDTAQGVQW 482
>gi|421498398|ref|ZP_15945512.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
gi|407182600|gb|EKE56543.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
Length = 458
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 221/392 (56%), Gaps = 41/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ ++ + AYV + GDV F VE +YG+LSGQ LE
Sbjct: 103 LGMLRPDIEPRATQHIHEIIALVETLLEKEHAYVADNGDVMFIVESFADYGKLSGQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEP+WDSPWGPGRPGWHIECSAM++ +L + FD
Sbjct: 163 LQAGARVDVVEAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHGGDYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ +R+FL+S HYRS LNYS L A A+ +Y L+D A + + + AR
Sbjct: 283 HFDAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDE-QVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M DD NT + F D ++ IN +Q+ I
Sbjct: 342 VDA---------------MDDDFNTPEAYSALF-DLVREIN------------RQKAEDI 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
+ ++E+ +LG +LQQ D LK E +E ++ QLI +R AR
Sbjct: 374 AVAAGLGARLRELGAVLG---------ILQQDPDAFLKGNEADDEVAEIEQLIAQRNQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K+++ +D RA LT GI L D +T WR
Sbjct: 425 ADKNWAAADAARARLTEMGIVLEDSAGKTSWR 456
>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 464
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 226/383 (59%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR +++++ I + + ++I+ AYV+ GDV++ K YG+LS + ++ +AG R+
Sbjct: 108 TVHPRATENIDDIINFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K+NP DF LWKAAK GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA +WMH G++ NNEKMSKS NFFT+R IT +Y P L
Sbjct: 228 LIFPHHENEIAQSEAANDAEFARFWMHIGYLNINNEKMSKSKNNFFTVRDITSQYDPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++++HYR+P+N+S L+ + + T+ + L + + + A ++
Sbjct: 288 RFFMLTSHYRNPINFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDR-ELSDEEKAYKEK 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ + F M DD NT+ ++ F+ ++ IN++++ PK+ LIE + I
Sbjct: 347 YDEYKRRFEEAMDDDFNTADAISVLFE-MVRDINTNID---GNSPKE----LIEYILDIF 398
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
++ VL I + K+ +L ++++ +LIE+R ARK K+++++D
Sbjct: 399 LKLSSVLGI-------------------SYKKRDLLDDEIKKLIEKREEARKAKNWAEAD 439
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L ++GIAL D W+
Sbjct: 440 KIRDELKKQGIALEDTPSGVRWK 462
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|416218561|ref|ZP_11624975.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|416234182|ref|ZP_11629731.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|416238906|ref|ZP_11631589.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|416243700|ref|ZP_11634035.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|416247920|ref|ZP_11636012.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|416255849|ref|ZP_11639418.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|421780418|ref|ZP_16216907.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BBH18]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
gi|407812574|gb|EKF83359.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 480
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 227/392 (57%), Gaps = 28/392 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L C P +PR ++H+E ++ +I ++ + AY G DV++A+EK PNYG+LS + +++
Sbjct: 112 LGCQSPNIEPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDD 171
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG ERV+ KR+P DF LWK AK EP W SPWG GRPGWHIECSAMS L
Sbjct: 172 MQAGASERVSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGET 231
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + ++WMH G + + EKMSKSLGNFFTIR++
Sbjct: 232 FDIHGGGHDLQFPHHENEIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREV 291
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+++HP +R FL+S+HYRSP+N+S L + A+ IYQ+L+ E+
Sbjct: 292 VDKFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSA--------ENFGVI 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I P A + ++ F M+DD NT ++ F + IN ++ + Q Q+ S
Sbjct: 344 SIMPNAWE--SEAGQAFAKAMNDDFNTPKAVSVLF-SVVTEINRAMKA-GEYQKATQEAS 399
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++L + N + + E LQ + K L++ ++ I +R A+
Sbjct: 400 TLKTLASVLN-----------IAQSSPHEFLQ--ANIGNKPDGLSDAEIANKIAQRQQAK 446
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+F+K+D IR +L R+GI L D T WR
Sbjct: 447 AQKNFAKADAIRDELNRQGIELEDGRMGTTWR 478
>gi|338533810|ref|YP_004667144.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
gi|337259906|gb|AEI66066.1| cysteinyl-tRNA synthetase [Myxococcus fulvus HW-1]
Length = 489
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 231/391 (59%), Gaps = 16/391 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P + P+VSDH+ +I +I ++++ AY +GDV+F+V +Y +LS + L++
Sbjct: 107 LHLLEPDFAPKVSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSRRNLDDL 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
GERV +KR P DFALWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDI
Sbjct: 167 CVGERVQPGEQKREPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDI 226
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS +A S YWMH G + KMSKSLGN +R +
Sbjct: 227 HGGALDLIFPHHENEIAQSESANGVSFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTK 286
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P ALR F ++ HYR PL++S L A + Y Y+TL+ + +S GK
Sbjct: 287 VDPEALRFFFLATHYRHPLSFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKG 341
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
P D + EF + M DD NT+ L AL + +N L K P + + +
Sbjct: 342 PLHGDP-RRFFTEFESAMDDDFNTAGGL-----GALSGLFGMMNELTDKPPVKDKALVGR 395
Query: 304 SLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+L+ + +V+ V +LGL P A+ L + +++A++ + V +L+ ER AAR
Sbjct: 396 TLQALREDVRRVSGVLGLFEDAPDAW---LLRRRERAVRERGIDVAAVERLLGERTAARA 452
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KDF+ +D++R++L ++G+ +MD T W+
Sbjct: 453 AKDFAAADRVRSELKQQGVEIMDTPAGTTWK 483
>gi|423578058|ref|ZP_17554177.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
gi|401203638|gb|EJR10474.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-D12]
Length = 465
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LKKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKNRNIILEDTAQGTRWK 463
>gi|379012779|ref|YP_005270591.1| cysteinyl-tRNA synthetase [Acetobacterium woodii DSM 1030]
gi|375303568|gb|AFA49702.1| cysteinyl-tRNA synthetase CysS [Acetobacterium woodii DSM 1030]
Length = 465
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 226/386 (58%), Gaps = 33/386 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
P+VS+++ +I +MI + AY V G+V++ VE +YG+LS Q +++ R+G R+ V
Sbjct: 110 HPKVSENITEIIEMIKTLEAKGLAYNVSGNVYYRVEAFKDYGKLSKQSIDDLRSGARIEV 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+ K +P DFALWK K GEP W SPWG GRPGWHIECSAMS +L + DIHGGG DLI
Sbjct: 170 NDEKHSPLDFALWKKKKDGEPYWPSPWGDGRPGWHIECSAMSKKHLGATIDIHGGGQDLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS +C + +YW+HNG++ +N+KMSKS GNFFT+R I +++ +R
Sbjct: 230 FPHHENEIAQSEGSCGKTFANYWVHNGYINIDNQKMSKSKGNFFTVRDIAKKFDLEVVRM 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL--SPFQEHGKTARINPAAEDC 249
FL+ AHYRSP+N+S + L A+ A+ +Y E L +P + +T +
Sbjct: 290 FLLMAHYRSPVNFSEVLLQQAATALERLYTAKFQMEFLLEKAPLEAATET---EMTWMNT 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+++ + +F A M DD+NT+ + F+ ++ +NS+L+ K ++ +
Sbjct: 347 LDQYKHDFIAAMDDDINTADAIAVIFE-LVRDLNSNLDANSTKA----------AIMAGQ 395
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKNKDFSKS 368
N E+ +LGL A+K E +D ++ LI +R AARK KDF ++
Sbjct: 396 NIFSELTTVLGL----------------AVKAKETNLDDAVEDLIAQRQAARKAKDFKRA 439
Query: 369 DQIRADLTRKGIALMDMGKETIWRPC 394
D IR +L KGI L D + W+
Sbjct: 440 DAIRDELLAKGIVLEDTREGVKWKKA 465
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 222/394 (56%), Gaps = 43/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR ++++ ++ ++I ++ N AY E GDV ++V YG+LSG+ L++
Sbjct: 105 LGILPPDHEPRATEYVPEMLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERV V++ KR+P DF LWK+AK EP W S WG GRPGWHIECSAMS+ L
Sbjct: 165 LRAGERVDVNTGKRDPLDFVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGD 224
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR
Sbjct: 225 HFDIHGGGADLQFPHHENEIAQSEGASGHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRD 284
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + Y LR F+I +HYRSPLNYS LD A A+ +Y L+D +V P
Sbjct: 285 VLKNYDAEVLRFFIIRSHYRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKP------- 337
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
++ E + F M+DD NT + F+ + + +N + Q
Sbjct: 338 --VDWQEEHAV-----RFSRAMNDDFNTPEAVAVLFE-----LANEVNRTHSVEVASQLK 385
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+L L +E + ++ L+ G + E E+ + I+ R A
Sbjct: 386 ALGSVLGLLERDPRQFLQGNGTVD-------------------ENEEKWIEAQIQARREA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+K +DF+K+D+IR +L KGI L D G +T WR
Sbjct: 427 KKTRDFAKADKIRNELLEKGIVLEDKPGGKTEWR 460
>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
Length = 440
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 259 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 318
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 319 ----LAE--MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---I 365
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 366 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 438
>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
Length = 420
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LKKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|187629790|sp|A0R8G1.1|SYC_BACAH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 465
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIHELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|387894410|ref|YP_006324707.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
gi|387159469|gb|AFJ54668.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens A506]
Length = 460
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 214/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRETD------- 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I++ + +KE+ +LG+L E L+ A R + E D LI+ R AAR
Sbjct: 373 -IDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 SNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 212/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 120 PDLEPRATHHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGA 179
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 180 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 239
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 240 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 299
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 300 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 347
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + I +
Sbjct: 348 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANG 391
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 392 LAAELRKLAHVLGLLEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDW 444
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 445 ALADSARDQLNELGIVLEDGPQGTTWR 471
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 219/393 (55%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +P+ + H+ +I M+ +I + AYV + GDV F V +YGRLSGQ LE
Sbjct: 103 LNIARPDIEPKATGHIPEIIAMVDTLIKDGHAYVADNGDVLFEVNSFADYGRLSGQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V+ KRNP DF LWK +K GEPSWDSPWGPGRPGWHIECSAM+ +L FD
Sbjct: 163 LQAGARVEVEQSKRNPLDFVLWKQSKPGEPSWDSPWGPGRPGWHIECSAMNGKHLGKHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANHSPYVNTWMHSGMVMVDQEKMSKSLGNFFTIRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTAR 241
Y +R+FL+S HYRS LNYS L A A+ +Y L+D EVA +
Sbjct: 283 HYDGETIRYFLLSGHYRSQLNYSDENLKQARTALERLYTALRDLPEVAAA---------- 332
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
ED + + F A M DD NT + F + +N K K
Sbjct: 333 ---GGEDFVAR----FTAAMDDDFNTPEAYSVLFD-----LAREINRQKGKDDA------ 374
Query: 302 IESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ + ++E+ +LGLL P A+ L+ A E+ D+ +LI+ R A
Sbjct: 375 --AAAGLGGRLRELAGVLGLLTQEPEAF------LRGDAGADDEVA--DIERLIQARLDA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+NKD++ +D R LT GI L D + T WR
Sbjct: 425 RQNKDWAAADAARDQLTAMGIVLEDGPEGTRWR 457
>gi|423094541|ref|ZP_17082337.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
gi|397886248|gb|EJL02731.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Q2-87]
Length = 460
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 213/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDLEPRATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K +P DF LWK AK GEPSWDSPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKEDPLDFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A+ P G A
Sbjct: 281 LDKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVPPAGGEGFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLNAAAGLAARLKELASVLGVLQ----LEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 TNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|423405186|ref|ZP_17382359.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|423462636|ref|ZP_17439430.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|423480029|ref|ZP_17456743.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
gi|401130815|gb|EJQ38471.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X2-1]
gi|401645556|gb|EJS63211.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG2X1-2]
gi|402424013|gb|EJV56209.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-1]
Length = 465
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 ----LAE--LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEVLIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|421896923|ref|ZP_16327318.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 221/391 (56%), Gaps = 44/391 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR ++++ Q+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGE
Sbjct: 110 PDHEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+H
Sbjct: 170 RVAANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y
Sbjct: 230 GGGADLQFPHHENEIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
P +R F++ +HYRS LNYS LD A A+ +Y L+D A+
Sbjct: 290 DPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG------------- 336
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A D F M+DD NT + F+ + S +N K + P
Sbjct: 337 AKPDWSESHGQRFREAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP---------- 379
Query: 305 LRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ N++ + ++GLL P A+ LQ A + E V IE R A+
Sbjct: 380 --ALVNQLAALGGVMGLLGRDPHAF---LQGGVGAAADGLDTVE--VEARIEARRVAKAA 432
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+DF+++D IRADL GI L D G T WR
Sbjct: 433 RDFARADGIRADLLAAGIVLEDKPGGVTEWR 463
>gi|417846323|ref|ZP_12492331.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
gi|341952725|gb|EGT79246.1| Cysteinyl-tRNA synthetase [Haemophilus haemolyticus M21639]
Length = 459
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 219/392 (55%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ +R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAETVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ + +N LK +
Sbjct: 334 --GGENFVATFREA----MDDDFNTPNALSVLFE-----MVREINKLKTEDA-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+S +D R +LT GI L D T WR
Sbjct: 426 AAKDWSAADAARNELTAMGIVLEDGPNGTTWR 457
>gi|426404249|ref|YP_007023220.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860917|gb|AFY01953.1| hypothetical protein Bdt_2270 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 482
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 220/393 (55%), Gaps = 16/393 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
A L P P+V++HM+ I+ M+ +++ AY +GDV +++E +YG+LSG+
Sbjct: 100 FAMLGLRPHDMNPKVTEHMDDIRSMVENLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNT 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ AG RV VD +KRNP DFALWKAAK GE SW SPWGPGRPGWHIECSAM + +
Sbjct: 160 DDLLAGARVEVDEKKRNPMDFALWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQ 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DLIFPHHENEIAQS + V YWMHN + +KMSKSLGN T+R+
Sbjct: 220 IDIHGGGMDLIFPHHENEIAQSEGCTGKAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREF 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP--FQEHGK 238
E Y+ + ++SAHYR+ ++ ++ A + +Y L E L+P QE
Sbjct: 280 LEMYNAEIYKWMILSAHYRTLSDFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAA 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
A+I +D K+ + M+ D T F+ +F N+ + K P Q
Sbjct: 340 FAKI---TQDAWKKVEEA----MNHDFGTPDAFAAMFEVVRQF-NAQVRRGMKVNPAIQG 391
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+L N V+++ + L A++ L +L D LK+ L V L+ ER
Sbjct: 392 KAL-----AFHNFVRKMGSTMSLFQEPAHA-FLIKLDDMLLKKMNLERSAVDTLVAERGE 445
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR KDF+KSD++RA +T GI++ D + + W
Sbjct: 446 ARAAKDFAKSDELRAKITALGISVSDTPEGSFW 478
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 220/394 (55%), Gaps = 41/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L P ++PR +D + Q+ MI + N AY +GDV +AV K NYGRLSG+ L++
Sbjct: 105 LGVARPEHEPRATDFVPQMLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERVA + K++P DF LWK+AK GEP SWDS +G GRPGWHIECSAM L
Sbjct: 165 LRAGERVAANDAKQDPLDFVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGH 224
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A ++ V+YWMHNG V ++EKMSKSLGNFFTIR+
Sbjct: 225 HFDIHGGGQDLQFPHHENEIAQSEGATGETFVNYWMHNGFVQVDSEKMSKSLGNFFTIRE 284
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ RY +R F++ HYRSPLNYS + LD A ++ +Y L+D +P
Sbjct: 285 VLARYDAEVMRFFIVRTHYRSPLNYSEVHLDDARASLTRLYTALKDVTPDAAPLDRDEPH 344
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
AR F A M+DD NT+ ++ F+ A + +N + +Q KQ
Sbjct: 345 AR--------------RFAAAMNDDFNTALAVSVLFELAGE-VNRTREPALARQLKQLGG 389
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
L R+ P AY + AL+ + + I R AA
Sbjct: 390 LLGLLGRE----------------PRAYLQQASGAASGALEAGAIEAQ-----IAARVAA 428
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
++ K+++++D+IRA L G+AL D G T WR
Sbjct: 429 KQAKNYAEADRIRAALLEAGVALEDKPGGLTEWR 462
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 212/385 (55%), Gaps = 36/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + H+ +I ++ ++I+N AYV + GDV F V+ P YG+LS Q L +AG
Sbjct: 108 PDFEPRATHHIPEIIALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FDIHGGG
Sbjct: 168 RVEINDIKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR + + Y
Sbjct: 228 SDLMFPHHENEIAQSCCAHGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
++R+FL++AHYRS LNYS L A A+ +Y L+ G A A
Sbjct: 288 SVRYFLLTAHYRSQLNYSEENLKLAHSALERLYTALR------------GTDANATAAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + + F A M DD NT L+ F A LN LK +Q Q
Sbjct: 336 E---QFIEAFKAAMDDDFNTPGALSVLFDMA-----RELNKLKAEQNPQTD--------A 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
++E+ +LGLL + + + D K E LI +R AR NKD++
Sbjct: 380 FAARLRELAGVLGLLYQDPETFLQAGMDDDETKIIE-------TLIAQRNQARANKDWAT 432
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R L G+ + D T WR
Sbjct: 433 ADAARDKLAAMGVVIEDGANGTTWR 457
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/390 (42%), Positives = 218/390 (55%), Gaps = 32/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++P + H+++I + +++ AY+ + GDV FA+ P+YG LS Q LE
Sbjct: 144 LNILRPDFEPNATHHIKEIIALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQ 203
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 204 LQAGARVEVADVKRNPLDFVLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFD 263
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH G V + EKMSKSL NFFTIR +
Sbjct: 264 IHGGGADLMFPHHENEIAQSTCANDGPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLA 323
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A ++ +Y L+D + H K+
Sbjct: 324 HYDAETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTALRDTDA------NHVKS--- 374
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A++ I K R F A M+DD NT + F A +N LK L
Sbjct: 375 ---ADNEIFKQR--FMAAMNDDFNTPEAYSVLFDLA-----REINRLKVDDMAMAN-ELA 423
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR++ N ILGLL E Q + + AE+ E + LI++R ARKN
Sbjct: 424 VQLRQLAN-------ILGLLTQN--PEQFLQSRAQVSHSAEI--EKIEALIKQRNDARKN 472
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K ++++D R +LTR GI L D + T+WR
Sbjct: 473 KFWAQADSARDELTRMGIILEDSPQGTVWR 502
>gi|430760198|ref|YP_007216055.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009822|gb|AGA32574.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
Length = 469
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/405 (40%), Positives = 219/405 (54%), Gaps = 45/405 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+A L LPPT +PR + H+ Q+ +I ++I AY+ + +AV P YGRLSG+ L
Sbjct: 105 VAGLGALPPTLEPRATKHIPQMISLIERLIARGHAYLADHHALYAVHSYPGYGRLSGRSL 164
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG RV V K++PADF LWK +K GEP+W+SPWGPGRPGWH+ECSAM +L
Sbjct: 165 DDMRAGARVEVAEYKKDPADFVLWKPSKPGEPAWESPWGPGRPGWHLECSAMIETHLGDT 224
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL+FPHHENEIAQ C A +W+HNGHVT + EKMSKSLGNF +R++
Sbjct: 225 IDIHGGGHDLVFPHHENEIAQGCGAHGVEYARFWVHNGHVTVDGEKMSKSLGNFRLLREL 284
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
Y LR L++ HYR+PLN+S L A +A+ +Y+ L+D H T
Sbjct: 285 LAAYPGEVLRLALLARHYRAPLNFSERGLTQARNALNSMYRVLRD----------HAGT- 333
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQ--DALKFINSSLNMLKKKQPKQQQ 298
PAAE + F A + DDLNT + + DAL S ++K
Sbjct: 334 ---PAAE-ADGRESPVFEALL-DDLNTPEAIAELHRMADALASATSPDEAARRK------ 382
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
E+ LGLL PGA+ A E + Q I ER
Sbjct: 383 -----------GELVAAGETLGLLQQDPGAWFHAGADTGPDA--------EWIEQRIAER 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPCVLVEQEQ 401
AARK +DF++SD IR +L G+ L D + T W+ V E+
Sbjct: 424 QAARKARDFARSDAIRDELAAAGVQLEDTAEGTRWQRTEAVSAEE 468
>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
Length = 465
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + +L +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEDLLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKNRNIILEDTAQGTRWK 463
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1.1|SYC_HAES1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 221/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I ++ ++I AYV + GDV F VE YG+LS Q L
Sbjct: 103 LNVLRPDFEPRATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM+ +L FD
Sbjct: 163 LQAGARVEISEIKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS LD A A+ +Y L+ + + F A+
Sbjct: 283 HYDAESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVAFGGENFIAQF 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M+DD NT + ++ F+ A +N L K + K L
Sbjct: 343 TEA---------------MNDDFNTPNAISVLFEMA-----REINRL-KNEDKLLADGLA 381
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR E+ ILGLL + LQ D AE+ + + LI++R AR+
Sbjct: 382 ARLR-------ELAGILGLLEQDP-EDFLQAGSDD----AEIAK--IEALIKQRNDARQA 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++++D R +LT G+ L D T+WR
Sbjct: 428 KDWARADAARNELTTMGVILEDGSNGTMWR 457
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 228/394 (57%), Gaps = 43/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP ++PR ++++ ++ ++I ++ N AY +GDV ++V YG+LSG+ L++
Sbjct: 105 LGILPPDHEPRATEYVPEMLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERV +++ KR+P DF LWK+AK EP W S WG GRPGWHIECSAMS+ L
Sbjct: 165 LRAGERVDINTGKRDPLDFVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGE 224
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A V+YWMHNG V +NEKMSKSLGNFFTIR
Sbjct: 225 HFDIHGGGADLQFPHHENEIAQSEGASHHPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRD 284
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + Y LR F+I +HYRSPLNYS LD A +A+ +Y L+D +V
Sbjct: 285 VLKSYDAEVLRFFIIRSHYRSPLNYSDAHLDDAKNALTRLYTALKDVDV----------- 333
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A D ++ F + M+DD NT + F+ A N + +
Sbjct: 334 ---KDQAVDWDSEYAKRFASAMNDDFNTPEAVAVLFELA--------NEVNRTH------ 376
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
L ++ +++K + +LGLL + LQ D A+ E E+ + I+ R A
Sbjct: 377 -----LAELGSQLKALAGVLGLLERDP-RQFLQ--GDGAVDEGE--EKWIESQIQARIDA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+K K+F+++D+IR++L KGI L D G T WR
Sbjct: 427 KKAKNFAEADKIRSELLEKGIVLEDKPGGLTEWR 460
>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 465
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKS+GNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSIGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 420
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 295 --NEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 418
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 226/394 (57%), Gaps = 8/394 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P +PRV++H+++I +I +I+ AYV GDV+F+V+ P YG+LS +
Sbjct: 101 MEAIGVRPADVEPRVTEHIQEIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG RV +KR+P DFALWKAAKAGEP+WDSPWGPGRPGWH EC AM +L +
Sbjct: 161 EELEAGARVEPSEKKRDPLDFALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DL+FPHHENEIAQ+ A YW+HNG VT +KMSKSLGN+ T+R++
Sbjct: 221 IDIHGGGLDLVFPHHENEIAQAEALTGRPFARYWVHNGLVTVGGQKMSKSLGNYVTLREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKT 239
RYHP LR ++ HYRSPL++S +++ + + + D E+ P +E
Sbjct: 281 YSRYHPDVLRLLVLMTHYRSPLDFSWDKMEETKRSYERLKNAITDAELLKELPSEE---- 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
R D I ++F A ++DD NT L F + +L++++ K +L
Sbjct: 337 VREKHPLLDKIRDAEEKFFADLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSEL 396
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAA 358
+ + E +K + I GL ++++ +K ++ + +E +++ LIE R+
Sbjct: 397 DAYQ--QASETLLKHLRGIFGLFEDLYPVCSVRRVVEKEMEAGHVLDERLIELLIEVRSK 454
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+ K ++ +D IR L GI L D T W+
Sbjct: 455 ARQEKAYAIADLIRDRLRELGIILEDTPAGTKWK 488
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/391 (41%), Positives = 229/391 (58%), Gaps = 16/391 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P + PRVSDH+ +I +I ++++ AY +GDV+F+V +Y +LS + L+
Sbjct: 122 LHLLEPDFSPRVSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDEL 181
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
GERV +KR P DFALWKAAK GEP+W+SPWGPGRPGWHIECSAMSA YL FDI
Sbjct: 182 CVGERVQPGEQKREPLDFALWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDI 241
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS +A + YWMH G + KMSKSLGN +R +
Sbjct: 242 HGGALDLIFPHHENEIAQSESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTK 301
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P ALR F ++ HYR PL++S L A + Y Y+TL+ + +S GK
Sbjct: 302 VDPEALRFFFLATHYRHPLSFSDKALADAETRMEYFYETLRKVDERIS-----GKDFGKG 356
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
P D + EF + M DD NT+ L +L + +N L K P + + +
Sbjct: 357 PLHGDP-QRFFTEFESAMDDDFNTAGGL-----GSLSGLFGMMNELTDKPPVKDKALVGR 410
Query: 304 SLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
+L + +V+ V +LGL P A+ L + +++A++ + +V +L+ ER AAR
Sbjct: 411 TLHALREDVRRVSSVLGLFEDAPDAW---LLRRRERAVRERGIDVAEVERLLGERTAARA 467
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KDF+ +D++R++L KG+ +MD T W+
Sbjct: 468 AKDFAAADRVRSELKEKGVEIMDTPAGTTWK 498
>gi|416231107|ref|ZP_11628689.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 227/392 (57%), Gaps = 28/392 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L C P +PR ++H+E ++ +I ++ + AY G DV++A+EK PNYG+LS + +++
Sbjct: 112 LGCQSPNIEPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDD 171
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+AG ERV+ KR+P DF LWK AK EP W SPWG GRPGWHIECSAMS L
Sbjct: 172 MQAGASERVSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGET 231
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A + ++WMH G + + EKMSKSLGNFFTIR++
Sbjct: 232 FDIHGGGHDLQFPHHENEIAQSEGATGKTYANHWMHMGFINIDGEKMSKSLGNFFTIREV 291
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+++HP +R FL+S+HYRSP+N+S L + A+ IYQ+L+ E+
Sbjct: 292 MDKFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSA--------ENFGVI 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
I P A + ++ F M+DD NT ++ F + IN ++ + Q Q+ S
Sbjct: 344 SIMPNAWE--SEAGQAFAKAMNDDFNTPKAVSVLF-SVVTEINRAMKA-GEYQKATQEAS 399
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++L + N + + E LQ + K L++ ++ I +R A+
Sbjct: 400 TLKTLASVLN-----------IAQSSPHEFLQ--ANIGNKPDGLSDAEIANKIAQRQQAK 446
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+F+K+D IR +L R+GI L D T WR
Sbjct: 447 AQKNFAKADAIRDELNRQGIELEDGRMGTTWR 478
>gi|423608085|ref|ZP_17583978.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
gi|401238768|gb|EJR45201.1| cysteinyl-tRNA synthetase [Bacillus cereus VD102]
Length = 465
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LKKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 222/392 (56%), Gaps = 37/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPP+ +PR + HM +I M+ +++ AYV + GDV++AV + YG+LSG+ ++
Sbjct: 103 LGVLPPSQEPRATGHMSEILAMVETLVDKGMAYVADNGDVYYAVGQFTGYGKLSGKDPQD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV + KR+P DFALWK+AK GEP+W+SPWG GRPGWHIECSAMS L + FD
Sbjct: 163 LRAGARVEIGESKRDPLDFALWKSAKPGEPAWESPWGMGRPGWHIECSAMSTCCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A + V+ WMHNG V N EKMSKSLGNFFT+R+I +
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILQ 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
RY +R+F++++HYRSPLNY L +A A+ +Y L+ F E
Sbjct: 283 RYQAEEVRYFILTSHYRSPLNYDDENLQNARGALTRLYTALRGLPEVEPAFGE------- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFIN--SSLNMLKKKQPKQQQLS 300
R+ F A M DD NT L F D ++ IN +M + +
Sbjct: 336 ---------TYRERFSAAMDDDFNTPVALAVLF-DLVREINRVRPTDMARAAALGAELRR 385
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L E L ++ + + LR G S L D ++ LI+ER AR
Sbjct: 386 LGEMLGILQGDAEVYLR-------GGPSSTEDDLSDARIE----------ALIQERTQAR 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++D++ +D+IR +L G+ L D + T WR
Sbjct: 429 ADRDWAAADRIRKELADAGVQLDDGPQGTTWR 460
>gi|225017556|ref|ZP_03706748.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
gi|224949706|gb|EEG30915.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
Length = 464
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 223/379 (58%), Gaps = 28/379 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T P+V+ M+ I D++ +++N AY +GDV+F K YG+LS LE+
Sbjct: 102 LNVRPATIHPKVTQSMDMIIDIVQHLVDNGYAYESQGDVYFRTTKFKEYGKLSHMPLEDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG RV V K +P DFA+WKAAK GEP+WDSPWG GRPGWHIECSAM+ +YL D+
Sbjct: 162 EAGNRVEVSDIKEDPMDFAVWKAAKPGEPAWDSPWGKGRPGWHIECSAMATNYLGKTIDL 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DLIFPHHENEIAQS A +YWMHNG++ +N KMSKSLGNFFT+R++ E+
Sbjct: 222 HCGGQDLIFPHHENEIAQSECATGAVFANYWMHNGYINVDNRKMSKSLGNFFTVREVAEK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ +R+ ++ AHYRSP+NY+V ++ ++ +Y ++ ALS ++
Sbjct: 282 FGYEPIRYMMLQAHYRSPINYNVEVIEQCKASLERMYNFKKNIAFALSKAED----GEFT 337
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
++ I + +F M DD NT+ ++ F+ ++ IN ++ + +Q ++L +
Sbjct: 338 DKQKEAILARKQQFIDAMEDDFNTADAISAVFE-LIRDINPLIS--GETLGSKQHIALAK 394
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
+ E++ +LGLL Y++ K E+ E V L+E+RAAARK K
Sbjct: 395 EI------FDELIGVLGLL----YND----------KEEEIPAE-VTALVEQRAAARKEK 433
Query: 364 DFSKSDQIRADLTRKGIAL 382
+F +D++R + G A+
Sbjct: 434 NFKLADELRDRIGELGYAI 452
>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
gi|224956650|gb|EEG37859.1| cysteine--tRNA ligase [Eubacterium hallii DSM 3353]
Length = 464
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 216/392 (55%), Gaps = 28/392 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L P T+ P+ ++ ++ + MI+ +I AY G V+F K NYG+LS + L
Sbjct: 99 MEGLNIEPATHNPKATEEIDGMIAMISTLIEKGYAYEKNGTVYFRTRKFKNYGQLSKKNL 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ RAG R+AV K + DF LWK K GEP+W SPWG GRPGWHIECS MS Y+
Sbjct: 159 DDMRAGIRIAVSDEKEDAMDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYIGDT 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GG DL+FPHHENEIAQS A + +YWMHN + +N+KMSKS GNFFT+R+I
Sbjct: 219 IDIHAGGEDLVFPHHENEIAQSEACNDEKFANYWMHNAFLNIDNKKMSKSAGNFFTVREI 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+E+Y +R F++SAHYRSPLN+S ++++ + + I + ++ E
Sbjct: 279 SEKYPLQVIRFFMLSAHYRSPLNFSDTLVEASKNGLERILTAIDHLREVIAAAPEGELNV 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
E+ N L+ ++ A M DD NT+ + F+ +K N + K QQ L
Sbjct: 339 EDQKNLEEA-NALKAKYEAAMEDDFNTADAIAAIFE-LVKLANVTAES-GSKAYAQQLLD 395
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I L ILG++ K+ EL ++D+ LIEER AAR
Sbjct: 396 IIVQL----------CDILGIITE---------------KKEELLDDDIEALIEERQAAR 430
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K+F+++D+IR L KGI L D W+
Sbjct: 431 KAKNFARADEIRDLLADKGIILEDTRAGVKWK 462
>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 420
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWK AK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M+DD NT++ +T + A N + L ++
Sbjct: 295 --NEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 230/389 (59%), Gaps = 27/389 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
LQ T PR +++++++ + + +I+ AY ++GDV+F+ +K YG+L GQ LE+
Sbjct: 102 LQVKRATINPRATEYIDEVVEFVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
++G R++VD RK++P DFA+WK+ K GEP+W+SPWG GRPGWHIECS M+ L DI
Sbjct: 162 QSGARISVDERKKDPMDFAVWKSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DL FPHHENEIAQS A +YWMH V +N+KMSKS NF T R+ ++
Sbjct: 222 HGGGMDLKFPHHENEIAQSEAVTGQKFANYWMHAAFVNVDNKKMSKSENNFVTAREALKK 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y+ +R ++S HYR+ +N+S LDSA +V +Y + + E ++ +
Sbjct: 282 YNSDVIRFLMLSGHYRTQINFSAELLDSAKSSVERLYNCVNNLENLINEVNRK-EANDSE 340
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
A ++K R++F +M DD NT+ ++ F D +K IN+++++ + + L+LI
Sbjct: 341 KAYLKSLDKHREKFIEKMDDDFNTADGISVIF-DLIKDINNNVSIDSSSELCEGTLNLIR 399
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
L G+ +LQ+ ++K+L E ++ +LI++R ARKN+
Sbjct: 400 EL-------------------GSPLGILQKTEEKSL------EVEIQELIDKRQEARKNR 434
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
DF+ +D+IR DL + I L D + W+
Sbjct: 435 DFALADKIRDDLKARNIILEDTPQGVRWK 463
>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254765181|sp|C0ZIF7.1|SYC_BREBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 468
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/400 (40%), Positives = 225/400 (56%), Gaps = 41/400 (10%)
Query: 2 ADLQCL---PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQ 58
ADL+ L PP QPRV + +I + + +I AY EGDV+F + YG+LS Q
Sbjct: 99 ADLKSLNVSPPDIQPRVMQTIPEIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQ 158
Query: 59 RLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
L++ +AG RV ++ +K +P DF LWKAAK GE +WDSPWG GRPGWHIECSAM+ +L
Sbjct: 159 PLDDLQAGARVEINEKKEHPLDFVLWKAAKTGEVTWDSPWGEGRPGWHIECSAMALKFLG 218
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ DIH GG DL+FPHHENEIAQS YW+HNG + +NEKMSKSLGNF R
Sbjct: 219 EEIDIHAGGTDLVFPHHENEIAQSECFTGKVFARYWLHNGMLNIDNEKMSKSLGNFLLAR 278
Query: 179 QITERYHPLALRHFLISAHYRSPLNYS---VLQLDSASDAVFYIYQTLQ---DCEVALSP 232
++E++ +R F++ HYR+P+N+S + Q + D + Y L D A P
Sbjct: 279 DLSEKFGGQLIRFFMLQGHYRNPINFSEELIEQAANGLDRITTAYTNLSHRLDTARAEEP 338
Query: 233 FQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+ + ARI I +LR+ F A M DD+NT++ +T F D +K N L
Sbjct: 339 NDQAQEQARI-------IGELRERFIAEMDDDINTANAITVIF-DVVKEANLYL------ 384
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ Q + E +R + + E+ +LGL D A + EL + ++ L
Sbjct: 385 --RHQNVGETE-VRAYMDLLVELTEVLGL--------------DIA-EEQELLDSEIDAL 426
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
IEER ARK ++F++SD+IR L KGI L D + WR
Sbjct: 427 IEERTEARKARNFARSDEIRDLLAAKGIVLEDTPQGVRWR 466
>gi|354594111|ref|ZP_09012154.1| cysteinyl-tRNA synthetase [Commensalibacter intestini A911]
gi|353673222|gb|EHD14918.1| cysteinyl-tRNA synthetase [Commensalibacter intestini A911]
Length = 544
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 234/439 (53%), Gaps = 47/439 (10%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + LPP +PR ++H+ +I MI Q+I N AY EG V F+V NYG LSG+
Sbjct: 104 MQSMYILPPDVEPRATEHIAEIISMIAQLIENGHAYAAEGHVLFSVPSYKNYGELSGRNP 163
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG RV V + K+NP DF LWK + A EP WDSPWG GRPGWHIECSAMS YL
Sbjct: 164 EELIAGARVEVATYKKNPGDFVLWKPSIADEPGWDSPWGKGRPGWHIECSAMSYRYLGKN 223
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL+FPHHENE AQS S+ + W+HN + + EKMSKSLGNFFTIR+
Sbjct: 224 FDIHGGGHDLLFPHHENECAQSLCCFPGSHFANVWVHNAMLLVDGEKMSKSLGNFFTIRE 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E+++P A+R L+ AHYRS LN+S L A + Y+ L E L F +G+T
Sbjct: 284 ILEQHNPEAIRFALLQAHYRSVLNFSQSGLKEAKQIMDRFYRALSAFEKELFIFDSYGET 343
Query: 240 AR---INPAAEDCINKLRDEFHA-----RMSDDLNTSHILTGAFQDALKFINSSLN---- 287
R + A D + + + + +M D LN L INS +
Sbjct: 344 VRYLFTDQALIDVCHSINEAENGNQDAIKMVDFLNKIAKKEFFLGQYLYDINSHITKDTW 403
Query: 288 --MLKKKQPKQQQLSLIESLRKIENEVKEVLR-----ILGLLPPGAYSEVLQQLKDKALK 340
++ K K+++ + + S K+ + K V + +L L V+ QL D+ALK
Sbjct: 404 HKLVTKIIDKKRKFTKLRSFLKVLSHKKYVSKSFLNAMLDDLNTPKALMVMHQLADQALK 463
Query: 341 -------RAELTEE--------------------DVLQLIEERAAARKNKDFSKSDQIRA 373
+ + E ++ LIE+R AA+K +DF+ +D+IR
Sbjct: 464 GDKEAAFKLKFAGEQLGLFNTLPTQWFQNTDKAQEIEALIEQRNAAKKARDFTTADRIRD 523
Query: 374 DLTRKGIALMDMGKETIWR 392
+L +GI L D + TIWR
Sbjct: 524 ELKDQGIMLEDSPQGTIWR 542
>gi|423671539|ref|ZP_17646543.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
gi|401291928|gb|EJR97593.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM034]
Length = 465
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A + N L L++ K
Sbjct: 340 --NEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVA-NYANQYL--LEEHTSK----V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 463
>gi|431927424|ref|YP_007240458.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
gi|431825711|gb|AGA86828.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
Length = 462
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/394 (40%), Positives = 216/394 (54%), Gaps = 44/394 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 105 LDVLRPDIEPRATDHIAGMHQMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIED 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G R+ VD K++P DF LWK AK GEPSW SPWG GRPGWHIECS MS L FD
Sbjct: 165 LKIGARIEVDEAKQDPLDFVLWKGAKPGEPSWSSPWGAGRPGWHIECSVMSTCCLGETFD 224
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++ E
Sbjct: 225 IHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE 284
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ +
Sbjct: 285 KYHPEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGL-------------PNV 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA D + F M DD N+ F D ++ +N L++ P
Sbjct: 332 APAGGD---EFVARFATAMDDDFNSPEACAVLF-DMIR----EVNRLRESDPT------- 376
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA----ELTEEDVLQLIEERAA 358
+ ++ +KE+ +LG+L QL+ +A +A ++ +V LI R
Sbjct: 377 -AAAQLAARLKELASVLGVL----------QLEPEAFLQAGAAGKVDAAEVEALIAARLT 425
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR LT G+ L D T WR
Sbjct: 426 ARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 459
>gi|423456289|ref|ZP_17433142.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
gi|401130888|gb|EJQ38543.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5X1-1]
Length = 465
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YNPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 463
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 214/387 (55%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + + +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKAED--------MTAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + TIWR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTIWR 459
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/403 (42%), Positives = 224/403 (55%), Gaps = 40/403 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR + ++ Q+ +M+ Q+ N AY +GDV +AV K YG+LSG+ LE+ RAGE
Sbjct: 108 PDHEPRATQYVPQMLEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGE 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RV V S K +P DF LWK AK GE WDS WG GRPGWH+ECSAM++ L + FDIH
Sbjct: 168 RVEVVSDKHDPLDFVLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIH 227
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ++Y
Sbjct: 228 GGGADLQFPHHENEIAQSEGAHRCQYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLKKY 287
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA--LSPFQE------- 235
+R F++ AHYRSPLNYS + LD A A+ +Y L+ + L P E
Sbjct: 288 DAEVVRFFILRAHYRSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEFPSP 347
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
G+ AR D F + M DD NT + F D +N S ++
Sbjct: 348 SGRGAR-GEGVIDWDTPHAARFKSAMDDDFNTPEAIAVLF-DLANEVNRSQSVTAAA--- 402
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE------DV 349
E+K + +LGLL + LQ L T E D+
Sbjct: 403 ---------------ELKTLAGVLGLLQRDP-QDFLQGRASMNLTVPTPTLEASGGALDI 446
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
LIE R AA+K+K+F+++D+IR +L GI L D + T WR
Sbjct: 447 DALIEARIAAKKSKNFAEADRIRKELLGAGIVLEDTPQGTTWR 489
>gi|384184174|ref|YP_005570070.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410672461|ref|YP_006924832.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452196467|ref|YP_007476548.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409171590|gb|AFV15895.1| cysteine--tRNA ligase CysS [Bacillus thuringiensis Bt407]
gi|452101860|gb|AGF98799.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWK AK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 ----LAE--LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
Length = 420
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 295 --NEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEVLIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 418
>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 420
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWK AK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M+DD NT++ +T + A N + L ++
Sbjct: 295 --NEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|402554324|ref|YP_006595595.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
gi|61216251|sp|Q73FB7.1|SYC_BACC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|401795534|gb|AFQ09393.1| cysteinyl-tRNA ligase [Bacillus cereus FRI-35]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I++ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIQAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8.1|SYC_POLNS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/409 (41%), Positives = 221/409 (54%), Gaps = 58/409 (14%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
+L + P +PR +D++ Q++ MI ++I N+ AY +GDV FAV P YG+LSG+ L+
Sbjct: 102 ELGLMHPDQEPRATDYIAQMQGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLD 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLS 118
AGERVAV KR+P DF LWK+AK EP+ W SPWG GRPGWHIECSAMS L
Sbjct: 162 ELNAGERVAVGDGKRDPLDFVLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLG 221
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSN--------VSYWMHNGHVTNNNEKMSKS 170
FDIHGGG DL FPHHENEIAQS A + V+YWMHNGH+ N EKMSKS
Sbjct: 222 EHFDIHGGGADLQFPHHENEIAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKS 281
Query: 171 LGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL 230
LGNFF IR + + + P +R F++ HYRSP+NYS QL+ A + +Y L A
Sbjct: 282 LGNFFLIRDVLKSFDPEVIRFFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQ 341
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
+ NP A+ F M+DD NT + F
Sbjct: 342 TI-----SLGSSNPWAK--------RFADAMNDDFNTPEAIAVLF--------------- 373
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVL-RILGLLPPGAYSEVLQQ-----LKDKALKRAEL 344
++ + + + E K+VL IL L GA LQ+ L+ A +A L
Sbjct: 374 ---------DIVSEVNRAQGEEKQVLANILKAL--GASLNFLQRDPTVFLQSSAKDQAGL 422
Query: 345 TEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+ E + + I R AA++ KDF+K+D IR L +GI L D G T WR
Sbjct: 423 SPEQIEEQIAARVAAKQAKDFAKADAIRKALLEQGIVLEDKPGGLTGWR 471
>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 449
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 88 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 147
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 148 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 207
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 208 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 267
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 268 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKW 327
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 328 ----LAE--MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 375 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEALIQKRIEAR 415
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 416 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 447
>gi|392551107|ref|ZP_10298244.1| cysteinyl-tRNA ligase [Pseudoalteromonas spongiae UST010723-006]
Length = 458
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 217/393 (55%), Gaps = 43/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LP +P V+ HM++I +MI ++I+ AYV GDV F V YG LS Q L+
Sbjct: 103 LNMLPADIEPTVTGHMDEIIEMIERLIDKKHAYVASNGDVLFDVSTFEQYGSLSQQDLDM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V K +P DF LWK AK EPSW SPWG GRPGWHIECSAMS +L + FD
Sbjct: 163 LQAGARVDVAEGKDDPLDFVLWKKAKVDEPSWSSPWGEGRPGWHIECSAMSNKHLGAHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A + V+ W+H G V N EKMSKSLGNFFT+R + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCATGEKYVNTWIHTGMVQVNKEKMSKSLGNFFTLRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R FLI+ HYRS LNYS L+ A A+ IY L+ EV + E+ AR
Sbjct: 283 EYDRESVRFFLINGHYRSQLNYSTENLEQARAAMERIYTALRGVEVVETSL-ENDYVARF 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
N A M+DD NT L F+ + +N LK + Q QL+
Sbjct: 342 NTA---------------MNDDFNTPEALPVIFE-----LAKEINRLKDEDANQAGQLAF 381
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I +K + ILG + QQ + L+ + +E ++ LI +R A
Sbjct: 382 I---------LKTLGEILG---------IAQQDPESFLQGEQADDEVAEIEALILQRNQA 423
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K+++ +D+ R LT G+ L D +T WR
Sbjct: 424 RADKNWALADEARDKLTALGVVLEDSAGKTTWR 456
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46.1|SYC_ANOFW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 220/394 (55%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++++ I I Q+I AY V+GDV++ + +YG+LS Q ++
Sbjct: 104 LGCKKADVHPRVTENIDTIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
++G R+ V +K +P DFALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 KSGARIEVGEKKEDPLDFALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P LR F++S HYR P+NYS L+SA L+ + A + + H + N
Sbjct: 284 VDPQVLRFFMLSVHYRHPINYSQPLLESARSG-------LERLKTAYANLK-HRLESSTN 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
D I +LR+EF M DD NT++ + F+ A N+ + QQ
Sbjct: 336 LTTNDEQWLAKIEELRNEFIREMDDDFNTANGIAVLFELA-----KQANVYLMENHTSQQ 390
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ ++ + +++ +LGL +L++ EL +E++ LI++R
Sbjct: 391 V-----IQAFLQQFEQLFDVLGL----------------SLQQDELLDEEIEALIQQRIE 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ +D+IR +L K I L D + T WR
Sbjct: 430 ARKNRDFALADRIRDELKAKNIILEDTPQGTRWR 463
>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
Length = 397
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 223/390 (57%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + ++E+I ++ ++I+ AYV + GDV F V K YGRLS Q L
Sbjct: 40 LNILRPDVEPRATAYIEEIIALVERLIDRGFAYVADNGDVMFEVSKFKEYGRLSKQDLTQ 99
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV +++ KR+P DF LWK +K GEP+W SPWGPGRPGWHIECSAM++ L + FD
Sbjct: 100 LQAGARVDIETAKRSPLDFVLWKMSKPGEPTWQSPWGPGRPGWHIECSAMNSSILGNHFD 159
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + +
Sbjct: 160 IHGGGSDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ 219
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A ++ +Y L+ ++ ++
Sbjct: 220 HYDPETVRYFLMSGHYRSQLNYSEENLTQARASLERLYTALRGLDMTVAA---------- 269
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ +++ F + M+DD NT + F D + +N + K Q S +
Sbjct: 270 -AGGEEYVSR----FTSAMNDDFNTPEAYSVLF-DMAREVN------RLKTEDMLQASAL 317
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L ++E+ ++G+L Y E + L+ + E++ LI+ R +R N
Sbjct: 318 GAL------MRELADVIGIL----YQEPERFLQSSVANDDQ--AEEIEALIKLRNDSRAN 365
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R LT GI L D T WR
Sbjct: 366 KDWANADLARHKLTEMGIILEDGPNGTTWR 395
>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|187629805|sp|A9KSM5.1|SYC_CLOPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 470
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/393 (38%), Positives = 215/393 (54%), Gaps = 30/393 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LP T +P+ ++ ++ + DMI ++I AY G V+F YG+LS + +++
Sbjct: 102 LNVLPVTTRPKATEEIDGMIDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLSKKNIDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG R+AV K +P DF LWK K GEP+W +PW GRPGWHIECS MS YL + DI
Sbjct: 162 EAGARIAVADEKDDPMDFVLWKPKKVGEPAWSAPWCDGRPGWHIECSVMSKKYLGDQIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DLIFPHHENEIAQ+ YWMHNG + +N+KMSKS GNFFT+R+I
Sbjct: 222 HAGGEDLIFPHHENEIAQTECCTGKEFAKYWMHNGFLNVDNKKMSKSEGNFFTVREIFAE 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y P LR FL+S +YRSP+N+S ++S+ + + I ++ E G+ +
Sbjct: 282 YAPAVLRFFLLSVNYRSPINFSRDIIESSKNGLERIQTAVEQLHFLAKVKAEKGELSTEL 341
Query: 244 PAAEDCINK----LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+E + K L +F M DD NT+ ++ F+ M+K
Sbjct: 342 TESESTLLKEFDALIKKFEDAMDDDFNTADAISSIFE-----------MVKLSNTYVTVE 390
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
S +E ++K+ + + ILGL + K+AE+ +E++ QLI +R +A
Sbjct: 391 SSVEMIQKVLSNITTFCDILGL---------------ETEKKAEILDEEIEQLIADRQSA 435
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK KDF+KSD+IR L KGI L D + W+
Sbjct: 436 RKAKDFAKSDEIRNLLLEKGIILEDTREGVKWK 468
>gi|407708038|ref|YP_006831623.1| 10 kDa chaperonin [Bacillus thuringiensis MC28]
gi|407385723|gb|AFU16224.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis MC28]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|423381863|ref|ZP_17359146.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
gi|423543577|ref|ZP_17519935.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401187742|gb|EJQ94814.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB5-5]
gi|401628489|gb|EJS46330.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1O-2]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEVLIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|423439732|ref|ZP_17416638.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|423450111|ref|ZP_17426989.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|423467989|ref|ZP_17444757.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|423537389|ref|ZP_17513807.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
gi|423543117|ref|ZP_17519505.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|423626968|ref|ZP_17602743.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|401126734|gb|EJQ34468.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG5O-1]
gi|401166817|gb|EJQ74117.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB4-10]
gi|401250163|gb|EJR56467.1| cysteinyl-tRNA synthetase [Bacillus cereus VD148]
gi|402411856|gb|EJV44219.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-1]
gi|402421913|gb|EJV54157.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG4X2-1]
gi|402459095|gb|EJV90833.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB2-9]
Length = 465
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 222/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 224/394 (56%), Gaps = 43/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L LPPT +PR + H+ +I M+ +I+ AYV + GDV++AV + P+YG+LSG+ +
Sbjct: 103 LGVLPPTDEPRATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPAD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV + KR+P DFALWKAAK GEP+WDSPWGPGRPGWHIECSAMS L + FD
Sbjct: 163 LRAGSRVEIGESKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS A + V+ WMHNG V N EKMSKSLGNFFT+R+I
Sbjct: 223 IHGGGADLQFPHHENEIAQSEGATGEPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREILR 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+F++++HYRSPLNY L A A+ +Y L+ A
Sbjct: 283 LYRPEEVRYFILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEA------------- 329
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + R F A M DD NT L F+ + +N L+ Q
Sbjct: 330 APAEGEA---FRARFQAAMDDDFNTPEALAVLFE-----LAREINRLRSDGSDQAAAH-- 379
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEERAA 358
+LR L GA +LQ ++ L+ ++ ++ +I +R A
Sbjct: 380 ----------GALLREL-----GAALGLLQDDPERYLRGGADADGPSDAEIEAMIAQRRA 424
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR N+D++++D++R LT GI L D + T WR
Sbjct: 425 ARANRDWAEADRLREALTAAGIVLEDGPQGTTWR 458
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7.1|SYC_HAEI8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 219/392 (55%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV + GDV F VE YG+LS Q LE
Sbjct: 103 LNVLRPDFEPRATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK +
Sbjct: 334 --GGENFVETFREA----MDDDFNTPNALSVLFEMA-----REINKLKTEDA-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + ++E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 375 EKANGLAARLRELGAILGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +L GI L D T WR
Sbjct: 426 AAKDWATADAARNELIAMGIVLEDGPNGTTWR 457
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 223/392 (56%), Gaps = 21/392 (5%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PRV+ H+ I I ++I+ AY V+GDV+F+V K +YG+LS + ++ AG
Sbjct: 108 PADIEPRVTTHIPDIIKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ +K++P DFALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG
Sbjct: 168 RIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
+DL FPHHENEIAQ+ + YW+HNG VT N +KMSKSLGN+ T+++I +Y P
Sbjct: 228 LDLTFPHHENEIAQAESLTGKPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYSKYEPD 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
LR ++S HYRSPL++S +++ A + +Q+ E+ Q+
Sbjct: 288 ILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIQEYEI----LQKLPTDENFEEDLY 343
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESL 305
I K + F++ MSDD NT L F + +N+LK K KQ +S ++S
Sbjct: 344 TEIQKAQSGFYSAMSDDFNTPEALASLFG-----LVRQMNILKDKAIKQGGISKKALQSY 398
Query: 306 RKIENEVKEVLR-ILGL---LPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAAR 360
++ + + + R I GL L P +E + K K+ E +ED++ LIE R AR
Sbjct: 399 KEAADTLHNICRDIFGLFDSLQPCVKTEEI-----KVEKQEEKLDEDLINILIEVRDKAR 453
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K FS +D IR L KGI + D T W+
Sbjct: 454 KEKQFSIADTIRDKLAEKGIVIEDTPFGTKWK 485
>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 468
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 216/383 (56%), Gaps = 26/383 (6%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV+++M+ I + I + AY GDVFF K P YG+LSGQ + + G R+
Sbjct: 110 TANPRVTENMDVIINFIRDLEQKGFAYESGGDVFFRTHKFPEYGKLSGQNIGELQFGIRI 169
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
VD RK +P DF LWKAAK GE W SPWG GRPGWHIECSAMS L DIHGGG D
Sbjct: 170 DVDERKEHPEDFVLWKAAKPGEIHWSSPWGEGRPGWHIECSAMSRQLLGDTLDIHGGGQD 229
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHE E+AQS AA YWMHNG++ + EKMSKSLGN ++ + +Y A+
Sbjct: 230 LQFPHHECEVAQSEAATGKPLARYWMHNGYINIDGEKMSKSLGNGVLVKDLRAQYKREAI 289
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+F++S HYR+PLN+S + A +V I + L+ + G+T ++ P +
Sbjct: 290 RYFMLSTHYRNPLNFSEETMQQAERSVERISNAANNLRHRLNTAPQGGET-KVTPEWAEK 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ +R+ FHA+M DD NT +T F+ S +N L +QP + L +L+ E
Sbjct: 349 LETIRNLFHAKMQDDFNTPDAITAVFEWV-----SEVNAL-LQQPVTVRGDLEAALQLFE 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
E+ VLRI LPP EL E++ LI ERA ARK K+++++D
Sbjct: 403 -EMNGVLRI--ALPP----------------ETELPGEEIEALIAERAEARKAKNWARAD 443
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L +GI L D + WR
Sbjct: 444 EIRDLLDARGIVLEDTPQGMRWR 466
>gi|354558420|ref|ZP_08977675.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353546898|gb|EHC16345.1| cysteinyl-tRNA synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 478
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 214/389 (55%), Gaps = 19/389 (4%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LP T P+ ++H+ ++ ++I +I AY V+GDV+FAV+K P YG+LSG+ LE+
Sbjct: 104 LHVLPATVHPKATEHIPEMLEIIQGLITKGLAYEVDGDVYFAVDKFPQYGKLSGRSLEDM 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK +P DFALWK AK EPSW SPWG GRPGWHIEC+AMS YL + FDI
Sbjct: 164 QAGARVDVDERKNHPMDFALWKKAKPDEPSWKSPWGEGRPGWHIECTAMSLKYLGAGFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQS + + YWMHN +T N +KMSKSLGNFFT+R+I +
Sbjct: 224 HGGGGDLVFPHHENEIAQSEGYLEGKPFAHYWMHNAFLTFNQQKMSKSLGNFFTVREILD 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ LR +L+S HYRSPL++ L A + + +++ AL+ +
Sbjct: 284 HFSGEVLRFYLLSTHYRSPLDFDDENLRMAQKGLERLQTSIRLAAEALTKKGPVEIKLEM 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
N +F A M DD N++ F+ + +N L + P
Sbjct: 344 NEELVKASETAHRDFEAAMDDDFNSALAYASLFE-----LGKHINTLLQDYPYASA---- 394
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
L K + E+ +LG L+ + + + + E + + L+ R AR+
Sbjct: 395 -GLAKARETLLELAGVLGF--------DLEHPESQEVAQDEKLTQVMEVLLSVRMKARQK 445
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
KD+ SD IR L GIAL D + W
Sbjct: 446 KDWETSDFIRDQLKEIGIALEDTPQGARW 474
>gi|336435108|ref|ZP_08614826.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
gi|336002001|gb|EGN32128.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 1_4_56FAA]
Length = 468
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 215/395 (54%), Gaps = 30/395 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MAD+ LP T P ++ + + ++I +I AY G V+F + +YG+LS + L
Sbjct: 99 MADMNVLPATTHPLATEEIGGMIELIGTLIEKGYAYAKNGTVYFRTRQFKDYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+G R V+ + K +P DF LWK K GEP+W+SPWG GRPGWHIECS MS YL
Sbjct: 159 DDLRSGNRALLVSGEDEKEDPLDFVLWKPKKEGEPAWESPWGEGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DLIFPHHENEIAQS AA YWMHNG + +N KMSKSLGNFFT+
Sbjct: 219 GEQIDIHAGGEDLIFPHHENEIAQSEAANGKEFSKYWMHNGFLNIDNRKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y LR F++SAHYRSPLN+S +++A + + I + L
Sbjct: 279 REIGEKYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLDRIVTATDNLRFLLGKASVDT 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T E +++ F M DD NT+ + F D +K N++ + K Q
Sbjct: 339 LTEEEQAQMEKAQGFVKN-FENAMEDDFNTADAVAAIF-DLVKHANTTASAESSKAYLQG 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L LI L +LG++ ++ +L + D+ LI ER
Sbjct: 397 VLDLIVKLSD----------VLGIITE---------------RKEDLLDADIEALIAERQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK ++F+++D+IR +L KGI L D + W+
Sbjct: 432 AARKERNFARADEIRDELLAKGIILEDTREGVKWK 466
>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 420
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKW 298
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 299 LAD------LKKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 345
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I++ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 346 VIQAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
gi|167663621|gb|EDS07751.1| cysteine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 468
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 215/397 (54%), Gaps = 30/397 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + DMI +I+ AY G V++ K YG+LS + L
Sbjct: 99 MDGMNIKPATKNPMATEEICGMVDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+GER V + K +P DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLRSGERSLLVTGEDEKEDPLDFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YWMHN + +N KMSKSLGNF T+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFAKYWMHNAFLNIDNRKMSKSLGNFRTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I+++Y LR F++SAHYRSPLN+S ++++ + I + + L +
Sbjct: 279 REISQQYDLQILRFFMLSAHYRSPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSES 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T A ++ EF M DD NT+ + F D +K+IN++ + K K+ Q
Sbjct: 339 MTQEEEAAFAKTAEYVQ-EFERAMDDDFNTADAIASVF-DLVKYINTTADADKSKEFLQN 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L+ L +LGL+ K+ E+ ED+ ++IEER
Sbjct: 397 LFDLLVKLTD----------VLGLIVD---------------KKEEMLAEDIEKMIEERQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
AARK KDF+++D IR +L KGI L D + W+
Sbjct: 432 AARKAKDFARADAIRDELLAKGIVLEDTREGVKWKKA 468
>gi|359785387|ref|ZP_09288539.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
gi|359297316|gb|EHK61552.1| cysteinyl-tRNA synthetase [Halomonas sp. GFAJ-1]
Length = 482
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 224/399 (56%), Gaps = 31/399 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L LPP+ +PR + H+ I MI +I+ AY + GDV++ V K NYG+L+ ++L
Sbjct: 100 ARLNVLPPSREPRATGHIGDIIAMIETLIDKGFAYPAKNGDVYYRVRKFANYGKLNNRQL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++ R+G RV VD K +P DF LWKAAK E W SPWG GRPGWHIECSAMS L
Sbjct: 160 DDMRSGARVDVDVHKEDPLDFVLWKAAKPTEAHWPSPWGDGRPGWHIECSAMSTCCLGDT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N EKMSKSLGNFFTIR +
Sbjct: 220 FDIHGGGPDLTFPHHENEIAQSEAATGKTYVNTWMHAGAVRVNQEKMSKSLGNFFTIRDV 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE--HGK 238
+ P +R+ L+++HYRS +NYSV L A ++ Y L+ EV S +E
Sbjct: 280 LAEHDPEVVRYLLVASHYRSAINYSVDSLVEARKSLTRFYTALEGVEVQESVGEELQQAP 339
Query: 239 TARIN-PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T+ + A+++ + + F M DD NT L F + +N K + P++
Sbjct: 340 TSEVAFIASKEEVAAYSERFTTAMDDDFNTPEALAVLFD-----LAREVNRAKGESPQKA 394
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-----LTEEDVLQL 352
L E+K + +LGL LQQ D LK A+ L+E ++
Sbjct: 395 LLL--------ALELKRLASVLGL---------LQQSPDTFLKGAQQHGVALSETEIEAK 437
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
I +R A+ +KDF+++D IR +L GI L D + T W
Sbjct: 438 IAQRKEAKASKDFAQADAIRDELAALGIILKDSREGTTW 476
>gi|423620302|ref|ZP_17596133.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
gi|401248862|gb|EJR55183.1| cysteinyl-tRNA synthetase [Bacillus cereus VD115]
Length = 465
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGVRIEVGEKKQDPLDFALWKAAKEGEIFWESPWGEGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MEKFQAAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAKEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|166200127|sp|A0LQZ8.1|SYC_ACIC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 469
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 223/393 (56%), Gaps = 40/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C+PPT +P + H+ QI +I ++I+ AY GDV+FAV P YG LSG+ +
Sbjct: 104 LGCVPPTVEPWATGHIPQIIALIRRLIDAGHAYPAGGDVYFAVRSFPAYGGLSGRDPDAL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AGE V KR+P DFALWK AK GEPSW+SPWGPGRPGWHIECSAMS YL S FDI
Sbjct: 164 QAGESDGV--HKRDPLDFALWKGAKPGEPSWESPWGPGRPGWHIECSAMSTTYLGSTFDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG+DL+FPHHENE AQS AA D YW+HNG VT EKMSKSLGN ++ Q+ E
Sbjct: 222 HGGGLDLLFPHHENECAQSQAA-GDGFARYWLHNGLVTLRGEKMSKSLGNVLSMDQLLEL 280
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P+ LR++LI AHYRS L++S L+ A+ A I L + +
Sbjct: 281 VRPIELRYYLIGAHYRSTLDFSEESLEEAAAAYRRIEGFLLRAQELVGEL---------- 330
Query: 244 PAAE---DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PAA+ I++L EF A + DDL L ++ N++L K
Sbjct: 331 PAADPQTGLIDRLPPEFVAALDDDLAVPRALA-VMHSVVRQGNAALAETDKT-------- 381
Query: 301 LIESLRKIENEVKEVLRILGLLPP--GAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++R+ EV +L ++GL PP G+ + L+++ D + +++ER A
Sbjct: 382 ---AVRRFLGEVTAMLDVMGLRPPDDGSRLDALRRVVDNLAR----------LVLDEREA 428
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR+ +DF+ +D +RA LT GI + D W
Sbjct: 429 ARQRRDFATADALRARLTDAGIVVEDTPSGPRW 461
>gi|423387424|ref|ZP_17364678.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|423526612|ref|ZP_17503057.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
gi|401629007|gb|EJS46835.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-2]
gi|402455652|gb|EJV87433.1| cysteinyl-tRNA synthetase [Bacillus cereus HuB1-1]
Length = 465
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWK AK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 ----LAE--LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIDALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|384177995|ref|YP_005563757.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 465
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I++ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIQAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
gi|156868218|gb|EDO61590.1| cysteine--tRNA ligase [Clostridium leptum DSM 753]
Length = 470
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 227/389 (58%), Gaps = 37/389 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGER 68
T PR ++ MEQI ++I+ ++ AY E GDV+F K YG+LS Q LE AG R
Sbjct: 108 TVHPRATETMEQIIEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGAR 167
Query: 69 VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
+ V K +P DFALWKAAK GEP WDSPWG GRPGWHIECSAM+ YL DIH GG
Sbjct: 168 IGVGESKEDPMDFALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQ 227
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS YWMHNG++ +N KMSKSL NFFT+R++ + +
Sbjct: 228 DLIFPHHENEIAQSECCNGVPFAHYWMHNGYINVDNRKMSKSLNNFFTVREVAKEFGYEP 287
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
+R+ ++++HYRSP+NYSV L + A+ +Y ++ E +S + G+ AR ++
Sbjct: 288 IRYLMVASHYRSPINYSVDLLKQCTAALERLYTCRENLEFVVSNAKP-GREAR-----DE 341
Query: 249 CINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQLSLI 302
I K +E+ R M DDLNT+ + F+ A K IN++L+ K+ ++ L+L
Sbjct: 342 EIKKRLEEYQNRFCEAMDDDLNTADAIAVLFELA-KDINTNLSTATNPHKEIAEEALTLF 400
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
SL +LGLL V + KD +E++ LI+ R ARKN
Sbjct: 401 NSLAD----------VLGLL------YVKKDTKDS-------LDEEIENLIQRRVEARKN 437
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
K+++++D+IR +L+ + + L D + T W
Sbjct: 438 KNWAEADRIRDELSARHVVLEDTPQGTKW 466
>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|423370672|ref|ZP_17348077.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|423473115|ref|ZP_17449857.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|423485389|ref|ZP_17462071.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|423491114|ref|ZP_17467758.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|423502090|ref|ZP_17478707.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|423514646|ref|ZP_17491153.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
gi|423514942|ref|ZP_17491423.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|423602381|ref|ZP_17578381.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|423665397|ref|ZP_17640536.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|423672657|ref|ZP_17647596.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|229558616|sp|A9VNA2.1|SYC_BACWK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|401073408|gb|EJP81830.1| cysteinyl-tRNA synthetase [Bacillus cereus VD142]
gi|401151484|gb|EJQ58935.1| cysteinyl-tRNA synthetase [Bacillus cereus CER074]
gi|401162039|gb|EJQ69398.1| cysteinyl-tRNA synthetase [Bacillus cereus CER057]
gi|401168443|gb|EJQ75706.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-4]
gi|401225920|gb|EJR32464.1| cysteinyl-tRNA synthetase [Bacillus cereus VD078]
gi|401290304|gb|EJR95999.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM022]
gi|401311517|gb|EJS16812.1| cysteinyl-tRNA synthetase [Bacillus cereus VDM062]
gi|402426613|gb|EJV58734.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6O-2]
gi|402441580|gb|EJV73530.1| cysteinyl-tRNA synthetase [Bacillus cereus BtB2-4]
gi|402442046|gb|EJV73990.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA2-1]
Length = 465
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 463
>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 436
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 218/385 (56%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++++++I +++ +I AYV + GDV F + K YG+LSGQ LE +AG
Sbjct: 84 PDVEPRATEYIKEIIELVETLIERGFAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGA 143
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV ++S KR+ DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 144 RVEIESAKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 203
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 204 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 263
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A A+ +Y +L+ ++ +S AR N A
Sbjct: 264 TVRYFLMSGHYRSQLNYSEDNLNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDA-- 321
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
M+DD NT + F D + IN + K + ++ SL
Sbjct: 322 -------------MNDDFNTPEAYSVLF-DMAREIN---------RLKAEDVAAASSLGV 358
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
++ +V+ IL P LK A E+ E + LI+ R +R +KD++
Sbjct: 359 TMRQLADVIGILHQDPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRASKDWAN 409
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 410 ADMARDKLTEMGIVLEDGPEGTTWR 434
>gi|383191176|ref|YP_005201304.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371589434|gb|AEX53164.1| cysteinyl-tRNA synthetase [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 463
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 217/394 (55%), Gaps = 34/394 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PR + H+ +I D++ +I+ D AYV GDV F VE P+YG LS Q
Sbjct: 100 FAALNILPPDSEPRATQHIHEIIDIVQTLIDRDHAYVASNGDVMFWVESDPDYGLLSRQD 159
Query: 60 LENNRAGERVAVDSR-KRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
L+ +AG RV V++ KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L
Sbjct: 160 LDQLQAGARVEVEANVKRNPMDFVLWKMSKPGEPSWTSPWGKGRPGWHIECSAMNCKQLG 219
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ FDIHGGG DL+FPHHENEIAQS A V+ WMH+G V + EKMSKSL NFFT+R
Sbjct: 220 AHFDIHGGGSDLMFPHHENEIAQSSCAHDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVR 279
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + Y ++R+FL+S HYRS LNYS L A ++ +Y L+ + A +P
Sbjct: 280 DVLKYYDAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAF 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R F A M DD NT + F D + IN + K +
Sbjct: 340 VTR---------------FRAAMDDDFNTPEAYSVLF-DMARDIN---------RLKTED 374
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
LS L E++++ +LGLL + Q LK A + ++ LI++R
Sbjct: 375 LSAANGLAA---ELRQLAGVLGLLE----QDPEQFLKSGAQADNDDEVAEIEALIKQRND 427
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +KD+ +D+ R L GI L D T WR
Sbjct: 428 ARASKDWGMADKARDRLNEMGIVLEDGPAGTTWR 461
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 224/385 (58%), Gaps = 37/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P+ ++ M++I DMI+ +++ AY GDV+F EK YG+L+ ++LE+ AG
Sbjct: 108 PDREPKATEFMQEIIDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ V+S K NPADF LWK+AK GE W SPWG GRPGWHIECSAMS + L FDIHGGG
Sbjct: 168 RIDVESAKENPADFVLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS A V+YWMH G V NNEKMSKSLGNFFT+R + E+Y+P
Sbjct: 228 PDLKFPHHENEIAQSECANGTDYVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLEKYNPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R ++S+ YRSP++YS L A + +Y +LQ +
Sbjct: 288 VIRFLMVSSQYRSPIDYSEQSLLEAKVGLERMYTSLQG-----------------QALTD 330
Query: 248 DCI-NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
D I + + + M DD NT ++ F D ++ +N + + S ++
Sbjct: 331 DYIASSYTERYQQAMDDDFNTPVAISVLF-DLVRELNKA------------KASAADNAP 377
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+ E+ + +LGLL G E LK+ L ++E ++ LI ER ARK+K+F+
Sbjct: 378 ILAKELSVLAELLGLL--GQDPEYF--LKNSVLNNG-ISEAEIETLIAERIQARKDKNFA 432
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
+SD+IR +L+ +GI L+D + T W
Sbjct: 433 RSDEIRDELSEQGITLLDSREGTSW 457
>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
Length = 449
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 88 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 147
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 148 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 207
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 208 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 267
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 268 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 327
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 328 ----LAE--MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 374
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 375 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 415
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 416 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 447
>gi|336421767|ref|ZP_08601922.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
gi|336009616|gb|EGN39607.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_57FAA]
Length = 468
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/397 (38%), Positives = 215/397 (54%), Gaps = 30/397 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + DMI +I+ AY G V++ K YG+LS + L
Sbjct: 99 MDGMNIKPATKNPLATEEICGMVDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+GER V + K +P DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLRSGERSLLVTGEDEKEDPLDFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YWMHN + +N KMSKSLGNF T+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFAKYWMHNAFLNIDNRKMSKSLGNFRTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I+++Y LR F++SAHYRSPLN+S ++++ + I + + L +
Sbjct: 279 REISQQYDLQILRFFMLSAHYRSPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSES 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T A ++ EF M DD NT+ + F D +K+IN++ + K K+ Q
Sbjct: 339 MTQEEEAAFAKTAEYVQ-EFERAMDDDFNTADAIASVF-DLVKYINTTADADKSKEFLQN 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L+ L +LGL+ K+ E+ ED+ ++IEER
Sbjct: 397 LFDLLVKLTD----------VLGLIVD---------------KKEEMLAEDIEKMIEERQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
AARK KDF+++D IR +L KGI L D + W+
Sbjct: 432 AARKAKDFARADAIRDELLAKGIVLEDTREGVKWKKA 468
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0.1|SYC_HAEDU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR ++H+ +I M+ ++I N AYV +GDV F V YG LS Q L+
Sbjct: 103 LNIMRPDVEPRATEHIAEIIAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEIKSAKKNPMDFVLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A Q V+YW+H G +T + EKMSKS+GNFF+IR +
Sbjct: 223 IHGGGADLMFPHHENEIAQSCCAHQGEYVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YS LD A A+ +Y L+ C++++ Q +G +
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSTDNLDLARSALERLYTALRGCDLSV---QANGGENYV 339
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
F M DD NT L F+ A +N L K + +QQ +L
Sbjct: 340 TA------------FKTAMDDDFNTPAALAVLFEMA-----REVNKL-KTEDQQQANALA 381
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
L KE+ +LGLL Q D LK ++ ++ LI++R A+
Sbjct: 382 VCL-------KELAAVLGLLT---------QDPDNFLKGEVNIDQTAEIEALIQQRNQAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NK+++ +DQ+R L I L D T+WR
Sbjct: 426 ANKNWAVADQVRGKLKAMNILLEDTPTGTVWR 457
>gi|417954102|ref|ZP_12597142.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342816142|gb|EGU51047.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 460
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 218/385 (56%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++++++I +++ +I AYV + GDV F + K YG+LSGQ LE +AG
Sbjct: 108 PDVEPRATEYIKEIIELVETLIERGFAYVADNGDVMFEIAKYDEYGKLSGQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV ++S KR+ DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVEIESAKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A A+ +Y +L+ ++ +S AR N A
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDA-- 345
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
M+DD NT + F D + IN + K + ++ SL
Sbjct: 346 -------------MNDDFNTPEAYSVLF-DMAREIN---------RLKAEDVAAASSLGV 382
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
++ +V+ IL P LK A E+ E + LI+ R +R +KD++
Sbjct: 383 TMRQLADVIGILHQDPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRASKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 434 ADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/391 (43%), Positives = 220/391 (56%), Gaps = 37/391 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PRV++HM + MI +I AYV GDV F+V YG+LSGQ L+
Sbjct: 103 LNILRPDLEPRVTEHMPDVIAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V+ K +P DF LWK +K EPSW+SPWG GRPGWHIECSAMS +L FD
Sbjct: 163 LQAGARVDVEESKHDPLDFVLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A + + WMH+G V + KMSKSL NFFTI+ + E
Sbjct: 223 IHGGGSDLTFPHHENEIAQSCCAHDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FLIS HYRS LNYS L A ++ +Y L+D +++ +P
Sbjct: 283 AYDAESVRYFLISGHYRSQLNYSEDNLKQARASLERLYTALRDVDISDAPI--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A+D N F M DD NT L F+ A K +N + K P +L+L+
Sbjct: 334 ---AKD--NSHYQAFCKAMDDDFNTPEALAVLFELA-KALNKAKLSADKSAP---ELALL 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKA-LKRAELTEEDVLQLIEERAAARK 361
LR + N +LGLL A + LQ + A +++ EL LI++R AR
Sbjct: 385 --LRTLGN-------VLGLLDQSA-DDFLQGDESSAEVEKIEL-------LIKQRNDARA 427
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD++ +D RA L+ I L D T WR
Sbjct: 428 NKDWASADDARAQLSALNIVLEDGANGTTWR 458
>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 420
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 216/392 (55%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++ AY EGDV++ ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L + ++ + I Y L+ + + +H
Sbjct: 239 YNPQLIRFFMLSVHYRHPINFSEELLQNTNNGLERIKTAYGNLKHRMESSTDLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F A M DD NT++ +T + A Q L
Sbjct: 295 --NEKWLAEMKKFQVAFEAAMDDDFNTANAVTELYNLA-------------NHANQYLLE 339
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
S +E VK+ + G+L L + EL +E++ LI++R AR
Sbjct: 340 EHTSKAVLEAYVKQFETLFGILGL-------------ELTKEELLDEEIEVLIQKRIEAR 386
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 387 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 418
>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 447
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 213/393 (54%), Gaps = 52/393 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P T PRV ++M++I ++ +I+ AYV EGDV+F V KS NY +L+ + LE
Sbjct: 101 AQLGIKPATQNPRVINYMDEIIAFVSTLIDKGFAYVAEGDVYFQVAKSKNYAKLANKTLE 160
Query: 62 NNRAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+ G D+ RK NP DFALWKAAK GE SW+SPWGPGRPGWHIECS M+ L
Sbjct: 161 DLEIGASGRTDAETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILG 220
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+
Sbjct: 221 NTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVH 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + LR FL + YR P+N++ + + D EV L +
Sbjct: 281 DMLKTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHS 326
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ +D + D F M DD NT++ +T F D K+INS
Sbjct: 327 LPLTDQVNQDELQTYLDAFQVAMDDDFNTANGVTVLF-DMAKWINSG------------- 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+++ +++L++ G++ + E E+ +ED+ +LIEER A
Sbjct: 373 ----NYDETVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQA 411
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 412 ARANKDFATADRIRDELAAQGIKLLDTREGVRW 444
>gi|421617568|ref|ZP_16058556.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
gi|409780556|gb|EKN60185.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri KOS6]
Length = 461
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/396 (40%), Positives = 216/396 (54%), Gaps = 44/396 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I AY GDV++ V K YG+LS +++
Sbjct: 102 ARLNVLRPDLEPRATDHIAGMHAMIQTLIGKGFAYAPGNGDVYYRVGKFVGYGKLSRRKI 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G R+ VD K +P DF LWK AK GEPSWDSPWG GRPGWHIECS MS L
Sbjct: 162 EDLKIGARIEVDEAKEDPLDFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGET 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 222 FDIHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ L Q G A
Sbjct: 282 LEKYHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLK----GLPEAQAAGGEA 337
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + F A M DD N+ F+ + +N L++ S
Sbjct: 338 FV------------ERFGAAMDDDFNSPEACAVLFE-----MIREVNRLRE--------S 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA----ELTEEDVLQLIEER 356
+ + + +K++ +LG+L QL+ +A +A ++ +V LI R
Sbjct: 373 DVPAAAGLAARLKQLAGVLGVL----------QLEPEAFLQAGAAGKVDAAEVEALIAAR 422
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR L G+ L D T WR
Sbjct: 423 LTARVEKNWAESDRIRDQLAAMGVVLEDGKGGTTWR 458
>gi|358638097|dbj|BAL25394.1| cysteinyl-tRNA synthetase [Azoarcus sp. KH32C]
Length = 437
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 218/390 (55%), Gaps = 44/390 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR ++ + Q++ +I ++ + AYV E DV +AV K YG+LSG+ L+ RAGE
Sbjct: 84 PNHEPRATEFVPQMQSLIGRLYDKGLAYVAENRDVCYAVRKFEGYGKLSGKTLDELRAGE 143
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RV + KR+P DF LWK A+ EP+ W+SPWG GRPGWHIECSAMS+ L FDIH
Sbjct: 144 RVEIVGEKRDPLDFVLWKHARVEEPAEVKWNSPWGDGRPGWHIECSAMSSQLLGEHFDIH 203
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENE+AQS A + V+YWMHNG V +NEKMSKSLGNFFTIR + ++Y
Sbjct: 204 GGGQDLQFPHHENEVAQSEGAHGHAFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVLKQY 263
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
P +R F++ AHYRSPLNYS LD A ++ +Y L++ + A
Sbjct: 264 DPEVVRFFILRAHYRSPLNYSDAHLDDARQSLTRLYTALRNVKTA--------------G 309
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
D F A M DD NT+ + F + + +N + Q
Sbjct: 310 GGVDWTESHAQRFRAAMDDDFNTAEAVAVLFD-----LANEVNRTGSESTAAQ------- 357
Query: 305 LRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+K + +LGLL P + + + A + + I +RA A+K
Sbjct: 358 -------LKGLAGVLGLLEREPQVFLQGGIGGQGGDADTAAIEAQ-----IAQRAEAKKA 405
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++F+++D+IRA+L +G+ L D + TIWR
Sbjct: 406 RNFAEADRIRAELLAQGVVLEDSAQGTIWR 435
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 222/391 (56%), Gaps = 44/391 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR ++++ Q+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGE
Sbjct: 110 PDHEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+H
Sbjct: 170 RVAANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y
Sbjct: 230 GGGADLQFPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
P +R F++ +HYRS LNYS LD A A+ +Y L+D A+
Sbjct: 290 DPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG------------- 336
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A D F M+DD NT + F+ + S +N K + P
Sbjct: 337 AKPDWSESHGQRFREAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP---------- 379
Query: 305 LRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+ N++ + ++GLL P A+ LQ A + E V IE R A+
Sbjct: 380 --ALVNQLAALGGVMGLLGRDPHAF---LQGGVGAAADGLDAAE--VEARIEARRVAKAE 432
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+DF+++D IRADL GI L D G T WR
Sbjct: 433 RDFARADGIRADLLAAGIVLEDKPGGVTEWR 463
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5.1|SYC_COLP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/402 (41%), Positives = 211/402 (52%), Gaps = 50/402 (12%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV--------EGDVFFAVEKSPNYGRL 55
L P +PRV+ HM +I MI ++ + AYV +GDV F V +YG+L
Sbjct: 103 LNMARPDLEPRVTTHMNEIIAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKL 162
Query: 56 SGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAH 115
SGQ LE ++G RV VD K NP DF LWK+AK GEPSW SPWG GRPGWHIECSAM+A
Sbjct: 163 SGQNLEQLQSGSRVEVDQNKNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAK 222
Query: 116 YLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFF 175
L FDIHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFF
Sbjct: 223 ELGHHFDIHGGGSDLTFPHHENEIAQSCCALNTPYVNYWMHTGMVQVDQEKMSKSLGNFF 282
Query: 176 TIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE 235
TIR + +Y +R FL + HYRS LNYS L A +V IY +L+D
Sbjct: 283 TIRDVLAQYDAETVRFFLTTGHYRSQLNYSTDNLTQARASVERIYTSLRD---------- 332
Query: 236 HGKTARINPAAEDCINK---LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
+N ++ INK +F M DD NT L F+ I+ LN+ K
Sbjct: 333 ------VNIESDYVINKDSSFVKQFCQAMDDDFNTPQALAVLFE-----ISKELNVAKAA 381
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGL--LPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ L +L + I+GL L P A+ + + A+ A
Sbjct: 382 ANNALAIDLASTLVALG-------EIVGLLQLDPAAFLQGDNDNDEVAIIEA-------- 426
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
LI +R AR +KD++ +D R L I L D +T WR
Sbjct: 427 -LIVQRNQARIDKDWAMADDARDKLNAMNIVLEDSAGKTTWR 467
>gi|399924308|ref|ZP_10781666.1| cysteinyl-tRNA synthetase [Peptoniphilus rhinitidis 1-13]
Length = 465
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 217/386 (56%), Gaps = 34/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++H+ +I + +I+ AYV GDV+F + + +YG+LS + LE+ +G RV
Sbjct: 109 TLNPRATEHIGEIISFVGTLIDKGAAYVSNGDVYFDISYAKDYGKLSKKNLEDLISGHRV 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
++ K+NP DFALWK K GEP W +PWG GRPGWHIECS M+ + DIH GG D
Sbjct: 169 DINDNKKNPQDFALWKNKKEGEPFWSAPWGEGRPGWHIECSVMAKTLIGDNIDIHTGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS +YW+HNG +T +NEKMSKS GNFFT+R+I + + L
Sbjct: 229 LQFPHHENEIAQSETCNGVPFANYWLHNGMITVDNEKMSKSKGNFFTVREIADEFDLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R FL++ YRSP+N+S ++ +A +Y E A+ E +I+ ++
Sbjct: 289 RFFLLTTQYRSPINFSREVMEQTKNASKRLYNAKYKLEDAI----EKSSVEKISDEEKNL 344
Query: 250 INKLR---DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
N ++F M DDLNT+ +T F D +K IN +L+ K+ L L+
Sbjct: 345 YNSFDKHIEKFENAMEDDLNTADAITAIF-DLIKDINLNLDENNSKEMLNNTLELL---- 399
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
K++ R+LG++ R EL+ D+ +LI+ER ARKNKDF+
Sbjct: 400 ------KKLTRVLGIMEN---------------DREELS-HDIDKLIKERNDARKNKDFA 437
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
++D+IR +L GI + D T W+
Sbjct: 438 RADEIRDNLKEMGIEIEDTRSGTTWK 463
>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|375282187|ref|YP_005102622.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|423357619|ref|ZP_17335214.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|423376318|ref|ZP_17353632.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|423572081|ref|ZP_17548295.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
gi|226735048|sp|B7HQS4.1|SYC_BACC7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254765178|sp|B9IZH4.1|SYC_BACCQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|358350710|dbj|BAL15882.1| cysteinyl-tRNA synthetase [Bacillus cereus NC7401]
gi|401074485|gb|EJP82885.1| cysteinyl-tRNA synthetase [Bacillus cereus IS075]
gi|401088775|gb|EJP96957.1| cysteinyl-tRNA synthetase [Bacillus cereus AND1407]
gi|401198803|gb|EJR05716.1| cysteinyl-tRNA synthetase [Bacillus cereus MSX-A12]
Length = 465
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 223/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + K + F M+DD NT++ +T + A N + L ++
Sbjct: 344 LAD------LKKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I++ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIQAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 212/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I +M ++I D AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ + +P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F A M DD NT + F I +N LK + I +
Sbjct: 342 ---------FRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANG 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q + + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQTDNDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTTWR 459
>gi|92117041|ref|YP_576770.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
gi|123083715|sp|Q1QN87.1|SYC_NITHX RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91799935|gb|ABE62310.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
Length = 482
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/408 (43%), Positives = 231/408 (56%), Gaps = 57/408 (13%)
Query: 1 MADLQCLPPTYQPRVSDHM----EQIKDMIT---QIINNDCAYVVEGDVFFAVEKSPNYG 53
+A L CLPPT+QPR ++ + + DM+T Q+I AY G+V F V+ P+YG
Sbjct: 109 VAALGCLPPTHQPRATEFVLPRDDGRADMVTLIKQLIARGHAYEAGGEVLFDVQSMPDYG 168
Query: 54 RLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMS 113
LSG+RLE +AG RVAVD+ KRNPADF LWK + EP WDSPWG GRPGWHIECSAMS
Sbjct: 169 ALSGRRLEEQKAGARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMS 228
Query: 114 AHYLSSKFDIHGGGIDLIFPHHENEIAQS-CAACQDSNVSYWMHNGHVTNNNEKMSKSLG 172
A YL FDIHGGG+DLIFPHHENEIAQS CA + +YWMHNG + EKMSKSLG
Sbjct: 229 AAYLGDVFDIHGGGLDLIFPHHENEIAQSRCAHGTHTMANYWMHNGFLQVEGEKMSKSLG 288
Query: 173 NFFTIRQI--TERYHPL-----ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD 225
NFFTI ++ TE++ LR ++ HYRSP++++V L+ + + Y + D
Sbjct: 289 NFFTINELLTTEKFGGRKWPGEVLRLAMLKTHYRSPIDWTVDALEESKRILDSWYDIVGD 348
Query: 226 CEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSS 285
+ I ++ E A + DDLNTS +T L I +S
Sbjct: 349 --------------------DTEAIGEVDREVSAFLGDDLNTSAAVT-----RLHAIAAS 383
Query: 286 LNMLKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELT 345
+ K QL I++ RK+ +V V+ LGLL E L+ L + L
Sbjct: 384 ------RIGKSGQLQ-IDAKRKL--KVSAVM--LGLLGR-TKREYLETDPQVILVDSNL- 430
Query: 346 EEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRP 393
V L+ +RAAAR KDF +SD+IR +L G+ L D GK+ +P
Sbjct: 431 ---VAHLLSDRAAARARKDFKESDRIRDELAAMGVVLKD-GKDADGKP 474
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 217/393 (55%), Gaps = 41/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I ++ +I AYV GDV F+++ +P+YG LS Q LE
Sbjct: 103 LNILRPDSEPRATHHIQEIIEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLG 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A ++ +Y +L+ + + P G AR
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAGFEARF 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M+DD NT + F A +N LK + I
Sbjct: 343 TEA---------------MNDDFNTPEAYSVLFDMA-----REINRLKAED--------I 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ + E++++ ILGL L+Q + L+ ++DV Q LI++R A
Sbjct: 375 VAANGLAAELRKLAGILGL---------LEQEPEHFLQGGAQVDDDVAQIEALIKQRNDA 425
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RKNK+++ +D R L GI L D + T WR
Sbjct: 426 RKNKEWALADAARNQLNELGIELEDGPQGTTWR 458
>gi|388467470|ref|ZP_10141680.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
gi|388011050|gb|EIK72237.1| cysteine--tRNA ligase [Pseudomonas synxantha BG33R]
Length = 460
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 215/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGPGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ ++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-CVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + E D LI+ R AAR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|452852528|ref|YP_007494212.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
gi|451896182|emb|CCH49061.1| Cysteinyl-tRNA synthetase [Desulfovibrio piezophilus]
Length = 485
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 222/385 (57%), Gaps = 17/385 (4%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGERVA 70
+P+ ++H+ ++ + +I D AY GDV+F V +YG+LSG+ ++ +G R+A
Sbjct: 110 EPKCTEHIPEMIALTQHLIETDHAYATPSGDVYFRVRSFEDYGKLSGRNVDELESGARIA 169
Query: 71 VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 130
K++P DFALWK AK GEPSW+SPWG GRPGWH+ECSAMS Y DIHGGG DL
Sbjct: 170 PGEEKQDPLDFALWKGAKPGEPSWESPWGQGRPGWHLECSAMSEKYAPLPLDIHGGGQDL 229
Query: 131 IFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
FPHHENEIAQS AA YW+HNG V N+EKMSKSLGNFFTIR I +++ P LR
Sbjct: 230 SFPHHENEIAQSEAATGKPFAKYWVHNGFVQINSEKMSKSLGNFFTIRDILDKFLPETLR 289
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
+FL++ HYRSPL++S L+ A + IY L +V L+ Q + +P E+ +
Sbjct: 290 YFLLTMHYRSPLDFSFEALEEAEKGIKRIYSALAQADVELAKTQ-----WKKSPFPEELV 344
Query: 251 NKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
+L DE M DD+NT+ GA I + +++ K ++ + + L
Sbjct: 345 TEL-DEIEKHWVEAMEDDMNTA----GALGHVFSAIRLTGRIVEDKNLRKSEGGR-DMLL 398
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
+I +++K +LG+ + L +L+D R+++ V +L+ R AR NKDF
Sbjct: 399 RIMDDMKTWGAVLGIFECQP-EDFLVELRDNRAVRSDIDPVRVQKLLGARKEARANKDFE 457
Query: 367 KSDQIRADLTRKGIALMDMGKETIW 391
KSD IR +L + + D + W
Sbjct: 458 KSDAIRDELMAMKVEVKDTPQGATW 482
>gi|333896167|ref|YP_004470041.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111432|gb|AEF16369.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 225/383 (58%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T+ PR ++++++I + + ++I+ AY +G+V++ K +YG+LS + ++ +AG R+
Sbjct: 108 TFHPRATENIKEIIEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K+NP DF LWKAAK GEP WDSPWG GRPGWHIECS MS +L DIH GG D
Sbjct: 168 EVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA YWMH G++ NNEKMSKS NFFT+R + +Y P L
Sbjct: 228 LIFPHHENEIAQSEAANDAEFAKYWMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ +HYR+P+NYS ++ A + + T+ + + L E + + A ++
Sbjct: 288 RFFMLMSHYRNPINYSQDLIEQAKNGYLRLSNTVYNLQHLLD-VAEDRQLSDEEKAYKEK 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ R +F M DD NT+ ++ F+ ++ INS+++ PK+ LI+ + +
Sbjct: 347 YEEYRRKFEEAMDDDFNTADAISVIFE-MVRDINSNID---GNSPKE----LIKYILDVF 398
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ VL I K+ EL ++++ +LIE+R ARK K+++++D
Sbjct: 399 LNLSSVLGI-------------------TYKKKELLDDEIKELIEKRQEARKAKNWAEAD 439
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L ++GI L D W+
Sbjct: 440 RIRDELKKQGIVLEDTPNGVRWK 462
>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 447
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 212/393 (53%), Gaps = 52/393 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P T PRV ++M++I ++ +I+ AYV EGDV+F V KS NY +L+ + LE
Sbjct: 101 AQLGIKPATQNPRVINYMDEIIAFVSTLIDKGFAYVAEGDVYFRVAKSKNYAKLANKTLE 160
Query: 62 NNRAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+ G D+ RK NP DFALWKAAK GE SW+SPWGPGRPGWHIECS M+ L
Sbjct: 161 DLEIGASGRTDAETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILG 220
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+
Sbjct: 221 DTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVH 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + LR FL + YR P+N++ + + D EV L +
Sbjct: 281 DMLKTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHS 326
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ +D + D F M DD NT++ +T F D K+INS
Sbjct: 327 LPLTDQVNQDELQTYLDAFQVAMDDDFNTANGVTVLF-DMAKWINSG------------- 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+++ +++L++ G+ V ++ E+ +ED+ +LIEER A
Sbjct: 373 ----NYDETVKDAFEKMLQVFGI--------VFEE---------EVLDEDIEKLIEERQA 411
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 412 ARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/385 (41%), Positives = 213/385 (55%), Gaps = 32/385 (8%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P + H+ +I ++ ++I D AYV GDV FAV+ P+YG LS Q LE +AG
Sbjct: 108 PDLEPHATHHISEIIQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV + KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ + T + E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGMD-----------TNAVAAGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F A +N LK + + +
Sbjct: 337 E----FEARFRAAMDDDFNTPEAYSVLFDMA-----REVNRLKGED--------MAAANG 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ E++++ +LGLL + LQ + E++E + LI++R AR +KD++
Sbjct: 380 LAAELRKLAHVLGLLAQDP-EQFLQSSAQTDVDNNEVSE--IEALIKQRNDARSSKDWAL 436
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R L GI L D + TIWR
Sbjct: 437 ADSARDRLNEMGIVLEDSPQGTIWR 461
>gi|399910862|ref|ZP_10779176.1| cysteinyl-tRNA synthetase [Halomonas sp. KM-1]
Length = 476
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 212/395 (53%), Gaps = 30/395 (7%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H+ +I M+ +I+ Y GDV++ V K YG+L+ + L
Sbjct: 100 ARLGVLRPDREPRATGHVSEIIAMVETLIDKGYGYPAANGDVYYRVRKFEGYGKLNNRNL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ RAG RV VD K +P DF LWKAAK GE SW SPWG GRPGWHIECSAMS L
Sbjct: 160 DEMRAGARVDVDEHKEDPLDFVLWKAAKPGEASWPSPWGEGRPGWHIECSAMSTCCLGDT 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA V+ WMH G V N EKMSKSLGNFFTIR++
Sbjct: 220 FDIHGGGPDLTFPHHENEIAQSEAATGKPYVNTWMHAGAVRVNQEKMSKSLGNFFTIREV 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E + P +R+ L+++HYRSP+NY+ L A ++ Y L V ++
Sbjct: 280 LEVHDPEVVRYLLVASHYRSPINYAPESLADARKSLERFYNALDGVGVG---GKDEKTIQ 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ A+ D F M DD NT+ L+ F + LN KK+ K
Sbjct: 337 KERALAKAVYGDFEDRFIVAMDDDFNTAEALSVLFD-----LARELNRAKKEATKLAP-- 389
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE----LTEEDVLQLIEER 356
+ +E+K + +LGL LQQ + LK L+E ++ I R
Sbjct: 390 ------GLAHELKRLGGVLGL---------LQQQPEAFLKGGAGELPLSESEIEAKIVAR 434
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A A+K +DF+ +D IR +L GI L D + T W
Sbjct: 435 AEAKKARDFAAADGIRDELATLGIVLKDSREGTSW 469
>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 440
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWK AK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 259 YNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 318
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M+DD NT++ +T + A N + L ++
Sbjct: 319 ----LAE--LEKFQTAFEEAMNDDFNTANAITELYNVA----NHANQYLLEEHTST---V 365
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 366 VIEAYVK---QLETLFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 438
>gi|89893193|ref|YP_516680.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6.1|SYC_DESHY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781676|sp|B8G1U2.1|SYC_DESHD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 217/393 (55%), Gaps = 23/393 (5%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L +P + P+ +DH+ ++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE
Sbjct: 102 AALNLMPASIHPKATDHIPEMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ +AG RV V RK+NP DFALWK AK GEP W+SPWG GRPGWHIECSAMS YL S F
Sbjct: 162 DMQAGARVEVGERKQNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL+FPHHENEIAQ+ + YWMHN +T N +KMSKSLGNFFT+R+I
Sbjct: 222 DIHGGGGDLVFPHHENEIAQAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREI 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E + +R +L+ HYRSPL++ L A + + +++ + AL ++ A
Sbjct: 282 LEHFPGEVIRFYLLGTHYRSPLDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADA 341
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ R EF M DD N++ F+ + ++N + P
Sbjct: 342 ASGQKLRAAAEEARREFAEAMDDDFNSALAYASLFE-----LGKAINAHVQAYPYSS--- 393
Query: 301 LIESLRKIENEVKEVLRILG--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
E L K + E+ +LG L P +E Q D+ ++ L+E RA
Sbjct: 394 --EGLLKARATLWELADVLGFDLAKPANQAEAGNQKLDQVMEL----------LLEVRAI 441
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK KD+ SD IR L GI L D + W
Sbjct: 442 ARKKKDWEMSDLIRDRLKDLGIVLEDTPQGARW 474
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Neptuniibacter caesariensis]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 221/393 (56%), Gaps = 39/393 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L L PT +PR + H+ I ++ +I AY GDV++ VEK +YG+L+ + +
Sbjct: 101 ARLSVLRPTQEPRATAHIGDIISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ + G R+ V+ K +P DF LWK+AK GE SWDSPWG GRPGWHIECSAMS L +
Sbjct: 161 DELKTGARIEVEEAKESPLDFVLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + V+ WMH G V N+EKMSKSLGNFFTIR +
Sbjct: 221 FDIHGGGPDLPFPHHENEIAQSEAANGCTYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+Y+ +R FL HYR+ ++YS L A + YQ L+ + P +
Sbjct: 281 LEKYNAEVVRFFLARVHYRTYIDYSEDSLKEARVMLERFYQALRGVDAVEGPLE------ 334
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK--KQPKQQQ 298
N + F A M+DD NT ++ F+ +N L K ++ +
Sbjct: 335 ----------NDFEERFIAAMNDDFNTPKAVSVMFE--------LVNELNKATREGASEA 376
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+L LRK+ +LGLL A E LQ ++ L+ E++ QLI +RA
Sbjct: 377 PALAAQLRKLGG-------MLGLLQQNA-DEFLQGESEE----GGLSNEEIEQLIVDRAE 424
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A+K K+F+++D+IR DL +GI L D + T W
Sbjct: 425 AKKAKNFAEADKIRDDLASQGIILKDSREGTSW 457
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|424903636|ref|ZP_18327149.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
gi|390931509|gb|EIP88910.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 163/389 (41%), Positives = 223/389 (57%), Gaps = 40/389 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR +D + Q+ MI ++ N AY +GDV ++V K NYG+LSG+ LE+ RAGE
Sbjct: 110 PDIEPRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K +P DF LWK AK +P SW+S +G GRPGWHIECSAM L FDIH
Sbjct: 170 RVAANDAKEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + V+YWMHNG V ++EKMSKSLGNFFTIR++ E++
Sbjct: 230 GGGQDLQFPHHENEIAQSEGATGQTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLEKF 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F++ HYRSPLNYS + LD A ++ +Y L+D ++P AR
Sbjct: 290 DAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDVAPLDWSEAHAR--- 346
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
F A M+DD NT+ + F+ L + + ++ +L
Sbjct: 347 -----------RFAAAMNDDFNTAVAVAVLFE------------LATEVNRTREPALARQ 383
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
L+++ VL +LG P E LQQ A + L E++ I R AA++ K+
Sbjct: 384 LKRLAG----VLGLLGREP----REFLQQAA-GAARAGALEPEEIEAKIAARVAAKQAKN 434
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
++++D+IRA+L GIAL D G T WR
Sbjct: 435 YAEADRIRAELLEAGIALEDKPGGSTEWR 463
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345890980|ref|ZP_08841841.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|345048705|gb|EGW52528.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. 6_1_46AFAA]
Length = 483
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 213/392 (54%), Gaps = 11/392 (2%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L +PR ++++ QI+++ ++I AY GDV+F V P YG+LSG+
Sbjct: 99 MDRLGVLRADLEPRATEYIPQIQELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRS 158
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L+ +G RVA K +P DFALWKAAK GEPSWDSPWG GRPGWHIECSAMS+ YL
Sbjct: 159 LDELLSGARVAPGEEKEDPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYLP- 217
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DL+FPHHENEIAQS A C+ YW+HNG V N EKMSKSLGNF TIR
Sbjct: 218 -LDIHGGGQDLVFPHHENEIAQSEAVCRCELARYWVHNGFVQVNAEKMSKSLGNFKTIRD 276
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I Y P LR FL+ HYRSP++++ +D A A +Y +L + AL
Sbjct: 277 ILGSYLPETLRFFLLGKHYRSPIDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTP 336
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+AE L F A + DDLNT+ L F ++ +N L K + +
Sbjct: 337 LPAELSAE--WAALPQAFEAALDDDLNTAQALGQIFSQ-VRIVNRLLEE-KNLRAAESTR 392
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
L+E + L + G P E L +L+ R L + V L+ +R
Sbjct: 393 DLLEDFLARARDWDAQLGLFGRDP----VEFLTELRAMRAARKNLDMDRVEDLLRQRREV 448
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
R KDF++SD +R +L G+ + D + W
Sbjct: 449 RMQKDFTRSDALRRELLDLGVNVRDTPEGQAW 480
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6.1|SYC_PERMH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 218/391 (55%), Gaps = 19/391 (4%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PRV+ H+ I D I ++I+ AY VEGDV+F+V K YG+LS + ++ AG
Sbjct: 108 PADVEPRVTTHIPDIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +KR+P DFALWKA+KAGEP+WDSPWG GRPGWH EC AM +L DIHGGG
Sbjct: 168 RVEPGEKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
+DL FPHHENE+AQ+ A YW+HNG VT N +KMSKSLGN+ T+++I +Y P
Sbjct: 228 LDLTFPHHENELAQAEALSDKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYDPD 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
LR ++S HYRSPL++S +++ A Y+ L+ ++ + +
Sbjct: 288 VLRLLVLSVHYRSPLDFSWEKMEETKKA----YERLKGAIDEYEILKKLPENPDFDEHLY 343
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIESL 305
D I K F+A MSDD NT L F + +N+L+ K K +S +ES
Sbjct: 344 DEIAKAEQGFYAAMSDDFNTPEALASLFT-----LVREMNILRDKAVKSGGISKKALESY 398
Query: 306 RKIENEV----KEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
++ + + KE+ + L P E ++ K + +L E LIE R ARK
Sbjct: 399 KEASDVLHSIGKEIFGLFDSLQPCIEVEEIKVEKAEEKIDTQLVE----ALIEVRNKARK 454
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K F +D IR L++ GI + D T W+
Sbjct: 455 EKQFEIADYIREKLSQLGIVIEDTPVGTKWK 485
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9.1|SYC_YERE8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 212/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I + ++I + AYV GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + I +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E+ LI++R AR +KD+
Sbjct: 380 LAAELRKLAYVLGLLEQDPELFLQSGAQTDDDEVAKIEV-------LIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTTWR 459
>gi|374705751|ref|ZP_09712621.1| cysteinyl-tRNA synthetase [Pseudomonas sp. S9]
Length = 460
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 214/394 (54%), Gaps = 40/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H+ + +MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLSVLRPDMEPRATSHISGMHEMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK AK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKGAKPGEPSWTSPWGEGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGPDLVFPHHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+FL+S+ YRSP+NYS L A A+ Y L+ A
Sbjct: 281 LEKYHPEVVRYFLVSSQYRSPINYSEDSLKEAKGALERFYHALKGLPEA----------- 329
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA D + F M DD N+ F+ + +N L+
Sbjct: 330 --APAGGDAYA---ERFAEAMDDDFNSPEACAVLFE-----MVREINRLRDTD------- 372
Query: 301 LIESLRKIENEVKEVLRILGL--LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+E+ + +K++ +LG+ L P ++ + A + ++ E V LI R
Sbjct: 373 -LEAAAGLAARLKQLASVLGVLQLEPESFLQ--------AGAKGKVDAEQVDALIAARLQ 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR LT G+ L D T WR
Sbjct: 424 ARSEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2.1|SYC_DESDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 215/381 (56%), Gaps = 11/381 (2%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVA 70
+PR +DH+++I+D+ +++ AY GDV+F V P YG+LSG+ L+ +G RVA
Sbjct: 110 EPRATDHIQEIQDLCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVA 169
Query: 71 VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 130
K +P DFALWKAAK GEPSW+SPWGPGRPGWHIECSAMS YL DIHGGG DL
Sbjct: 170 PGEEKEDPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSESYLP--LDIHGGGQDL 227
Query: 131 IFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
+FPHHENEIAQ+ A C YW+HNG V N EKMSKSLGNF TIR I E Y P LR
Sbjct: 228 VFPHHENEIAQTEAVCHCHLARYWVHNGFVQVNAEKMSKSLGNFKTIRDILESYLPETLR 287
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
FL+ HYRSP++++ +D A A+ +Y L + + AL+ +E K + + +
Sbjct: 288 FFLLGKHYRSPIDFTAEGMDEAEKALHRVYTALLETQKALT--REKWKKSPLPAQLTEDW 345
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
+ M+DDLNT+ L F ++ +N L K + + L++
Sbjct: 346 AAQAEALDEAMNDDLNTAQALGHIFTQ-VRLVNRLLED-KTLRAAEAGRDLLQDFLARAE 403
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
+ L + G P L L+ R + V L++ER AR NKDF++SD
Sbjct: 404 QWNTRLGLFGQQPEA----FLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDA 459
Query: 371 IRADLTRKGIALMDMGKETIW 391
+R L G+++ D + W
Sbjct: 460 LRQALLDLGVSVQDTPEGQNW 480
>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|166200148|sp|A4IJG8.1|SYC_GEOTN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 467
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 219/393 (55%), Gaps = 37/393 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV++++E I + I +I+ AY V+GDV++ K YG+LS Q ++
Sbjct: 105 LGCKKADIHPRVTENIETIIEFIQALIDKGYAYEVDGDVYYRTRKFDGYGKLSHQSIDEL 164
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ V +K +P DFALWKAAK GE SWDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 165 QAGARIEVGEKKDDPLDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMARKYLGDTIDI 224
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YW+HNG++ NNEKMSKSLGNF + I +
Sbjct: 225 HAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIRQ 284
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-GKTARI 242
P LR F++S HYR P+NYS L+SA + L+ A Q G + +
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESAR-------RGLERLRTAYGNLQHRLGASTNL 337
Query: 243 NPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ +++L D F M DD NT++ + F+ A K N L Q K
Sbjct: 338 TDNDGEWLSRLADIRASFIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTSE 390
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
++I + + E ++++ +LGL LK+ EL +E++ LI +R A
Sbjct: 391 NVIHAFLR---EFEQLMDVLGL----------------TLKQEELLDEEIEALIRQRNEA 431
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RKN+DF+ +D+IR +L K I L D + T W+
Sbjct: 432 RKNRDFALADRIRDELKAKNIILEDTPQGTRWK 464
>gi|308070997|ref|YP_003872602.1| cysteinyl-tRNA synthetase [Paenibacillus polymyxa E681]
gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
polymyxa E681]
Length = 467
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 223/392 (56%), Gaps = 27/392 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+A L + PRV++ M+ I D I ++++ AY +GDVF+ +K +YG+LSGQ L
Sbjct: 101 LAGLNVPAASMNPRVTESMDLIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ VD RK N DF LWKAAK GE W SPWG GRPGWHIECSAM+ HYL
Sbjct: 161 EELQFGIRINVDERKENAEDFVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E AQS YWMHNG++ +NEKMSKSLGN ++ +
Sbjct: 221 LDIHGGGQDLQFPHHECECAQSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ P ALR+F++S HYR+PLNY+ + A ++V I + + + L+ E
Sbjct: 281 RAHHKPEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALE--GNG 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ + ++ + +F +M+DD NT +T F +++ + ++L++ Q +L
Sbjct: 339 EVSTELQTKLDGILQQFGEKMNDDFNTPDAITAVFD----WVSEANHLLQRDVVHQAEL- 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + + VLRI YSE EL ++++ QLI ER AR
Sbjct: 394 --QAVLHTFHSMNSVLRI--------YSE----------PSEELLDDEIEQLIAERVEAR 433
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K++S++D+IR L KGI L D + WR
Sbjct: 434 KTKNWSRADEIRDLLAAKGIVLEDTAQGMRWR 465
>gi|405373480|ref|ZP_11028253.1| Cysteinyl-tRNA synthetase [Chondromyces apiculatus DSM 436]
gi|397087739|gb|EJJ18769.1| Cysteinyl-tRNA synthetase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 489
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 231/396 (58%), Gaps = 26/396 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L P PRVSDH+ +I +I ++++ AY +GDV+F+V +Y +LS + L++
Sbjct: 107 LHLLEPDVAPRVSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDADYAKLSKRNLDDL 166
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
G+RV +KR P DFALWKAAK GEP+WDSPWGPGRPGWHIECSAMSA YL FDI
Sbjct: 167 CVGDRVQPGEQKREPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSAKYLGETFDI 226
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGG +DLIFPHHENEIAQS +A + YWMH G + KMSKSLGN +R +
Sbjct: 227 HGGALDLIFPHHENEIAQSESANGVTFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTK 286
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ--DCEVALSPFQE---HGK 238
P ALR F +S HYR PL +S L A + Y Y+TL+ D VA F + HG+
Sbjct: 287 VDPEALRFFFLSTHYRHPLAFSDKALADAEARMEYFYETLRKVDERVAGKDFGKGPLHGE 346
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
R EF + M DD N++ L +L + +N L K P + +
Sbjct: 347 PHR-----------FFGEFESAMDDDFNSAGGLG-----SLSGLFGMMNELADKPPVKDK 390
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ +L+ + +V+ V +LGL P A+ L + +++A++ + DV +L+ ER
Sbjct: 391 ALMGRTLQALREDVRRVSGVLGLFEDAPDAW---LLRRRERAVRERGIDVADVERLLGER 447
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR KDF+ +D++R++L +KG+ +MD T W+
Sbjct: 448 TAARAAKDFAAADRVRSELKQKGVEIMDTPAGTTWK 483
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 222/392 (56%), Gaps = 46/392 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + Q+ MI Q+ +N AY +GDV ++V K NYG+LSG+ L++ RAGE
Sbjct: 110 PDIEPRATQFIPQMLGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K +P DF LWK AK +P SW+S +G GRPGWHIECSAM L FDIH
Sbjct: 170 RVAANDAKEDPLDFVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR++ ERY
Sbjct: 230 GGGQDLQFPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTAR 241
+R F++ HYRSPLNYS + LD A ++ +Y L+D E +AL + H +
Sbjct: 290 DAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEPHAQ--- 346
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
F A M+DD NT + F+ A + +N + + +Q KQ L
Sbjct: 347 --------------RFAAAMNDDFNTPVAIATLFELAGE-VNRTRDASLARQLKQLAGLL 391
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
R+ P A+ LQQ A + L +++ I R AA++
Sbjct: 392 GLLGRE----------------PRAF---LQQASGAA-RDGGLAADEIEAKIAARVAAKQ 431
Query: 362 NKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
KD++++D+IRA+L GIAL D G T WR
Sbjct: 432 AKDYAEADRIRAELLDAGIALEDKPGGSTEWR 463
>gi|423526408|ref|ZP_17502857.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
gi|401163458|gb|EJQ70804.1| cysteinyl-tRNA synthetase [Bacillus cereus HuA4-10]
Length = 465
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTVQGTRWK 463
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 224/396 (56%), Gaps = 34/396 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T P+ +DH++++ ++I + AY VEGDV+FAVE P YGRLSG+ LE+
Sbjct: 104 LNIQPATVHPKATDHIKEMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV +D +K NP DFALWK AK GEP+W SPWG GRPGWHIECSAM+ YL FDI
Sbjct: 164 QAGARVEIDDKKLNPMDFALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL+FPHHENEIAQS + YWMHN +T N EKMSKSLGNFF IR I +
Sbjct: 224 HGGGGDLVFPHHENEIAQSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDILK 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
++ +R +L+ HYRSPL++ +L+ A+ + + +++ ALS GK+
Sbjct: 284 KFPGEVVRFYLLGTHYRSPLDFDDEKLEMAARGLDRLKTSVRLAGEALS----KGKSTDS 339
Query: 243 NPAAEDCIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLN--MLKKKQPKQQ 297
+ +N K R F M DD N++ F D K IN++LN Q +
Sbjct: 340 AGTRGELLNASSKARAAFEEAMEDDFNSAQAYASLF-DLAKEINTALNEGGWTGAQIAEA 398
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-VLQLI-EE 355
+ +LI ++ ILG LQ KD + E + + V++L+ E
Sbjct: 399 RDTLI-----------DLAGILGF--------DLQ--KDSEVPAGESGKFNAVMELVLEL 437
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
RA AR +KD+S +D IR L I L D + + W
Sbjct: 438 RAKARADKDWSTADLIRDRLKEASIILEDTAEGSRW 473
>gi|423596979|ref|ZP_17572989.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
gi|401218156|gb|EJR24840.1| cysteinyl-tRNA synthetase [Bacillus cereus VD048]
Length = 465
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 224/392 (57%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + + + F M DD NT++ +T + A N + L ++ +
Sbjct: 344 ----LAE--MERFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 463
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 213/387 (55%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ +V +P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F A M DD NT + F I +N LK + I +
Sbjct: 342 ---------FRAAMDDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQADGDEVAKIE-------ALIKQRNDARTSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T+WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTVWR 459
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1.1|SYC_ANADF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/401 (40%), Positives = 218/401 (54%), Gaps = 30/401 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M L L P P+VS+H+ QI MI+ ++ AY GDV+F+V P+YGRLS +
Sbjct: 101 MDALGNLRPDVAPKVSEHVPQIVAMISSLVEKGFAYAAANGDVYFSVRAFPDYGRLSKRN 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L++ +G RV KR+P DFALWKAAK GEP+WDSPWG GRPGWHIECSAM+ +L
Sbjct: 161 LDDLLSGARVEPGEAKRDPLDFALWKAAKPGEPTWDSPWGGGRPGWHIECSAMTLAHLGV 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVS-----YWMHNGHVTNNNEKMSKSLGNF 174
D+HGGG DL+FPHH NEIAQS AA D + +WMH+G V ++EKMSKSLGNF
Sbjct: 221 PIDLHGGGKDLVFPHHTNEIAQSAAAVGDGRTAESFCRHWMHHGFVEIDSEKMSKSLGNF 280
Query: 175 FTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV---ALS 231
FT+R + ++ +R F + HYR+P+NYS L A + Y Y+TL+ + S
Sbjct: 281 FTLRDVLAKFDAEGVRLFYLGTHYRNPINYSDAILAEAERRLNYFYETLEKVDALAEGTS 340
Query: 232 PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
P E G ED L DD N +L +A N+ + K
Sbjct: 341 PAGEGGGV------VEDARRAL--------DDDFNAPQVLA-VLAEAFTAANALADKRGK 385
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ 351
K P+ + L +V+E+ LGL+ + A +R + V
Sbjct: 386 KTPEDRA-----RLAAFARDVREIGTTLGLVQRRPAEALRAIRARAAARRG-IDPASVEA 439
Query: 352 LIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I ERA AR+ +DF++SD IR L +G+ALMD + T W+
Sbjct: 440 KIVERAEARRARDFARSDAIRDALLAQGVALMDGPQGTTWK 480
>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|21264005|sp|Q8YXW5.1|SYC_NOSS1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 486
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 234/401 (58%), Gaps = 34/401 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L PRV++H+ +I +I + AY V GDV++ VE+ P+YG+LSG+ LE
Sbjct: 104 LNVLDADEYPRVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQM 163
Query: 64 RAGERVAVDS-----RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+AG VD+ +K++P DFALWKAAK GEP+WDSPWG GRPGWHIECSAM L
Sbjct: 164 QAGASGRVDAEDSEPKKQHPFDFALWKAAKPGEPAWDSPWGAGRPGWHIECSAMIRSKLG 223
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
+ DIHGGG DLIFPHHENEIAQS AA YW HNG V N +KMSKSLGNF TIR
Sbjct: 224 ATIDIHGGGGDLIFPHHENEIAQSEAAMNQPLARYWTHNGMVMVNGQKMSKSLGNFITIR 283
Query: 179 QITER--------YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL 230
++ + +P+A+R F++ AHYR PL+++ + +A ++ ++TL+ E L
Sbjct: 284 ELLDGVGSWKEDPVNPMAVRLFVLQAHYRKPLDFTEEAIATAENS----WKTLK--EGLL 337
Query: 231 SPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK 290
+Q K +A I +L F DD N S L F+ A K + N+L
Sbjct: 338 FGYQYGEKLGWGQESA--IIPELATRFQELGDDDFNFSGGLAVLFELA-KELRREGNILV 394
Query: 291 KKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL 350
+ + + + L++ N + + +ILGL +L D+ +A L++ D+
Sbjct: 395 HEGTTK---TPSDELQRQWNTLVTLAKILGLEA---------KLDDETQTQAGLSDTDIE 442
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
LIE+R AARKNK+FS+SD+IR +L +G+ L+D + T W
Sbjct: 443 ALIEQRQAARKNKNFSESDRIRNELQAQGVTLIDSPQGTRW 483
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 221/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I N AYV +GDV F VE P YG LS Q L+
Sbjct: 103 LNILRPDVEPRATHHISEIIAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGNGRPGWHIECSAMNSKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H G +T + EKMSKSLGNFF+IR + +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCANHGNYVNYWLHTGMLTIDKEKMSKSLGNFFSIRYMLD 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YS+ L+ A A+ +Y L+ C++ +
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSIDNLNLARSALERLYTALRGCDLTV------------ 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + F M DD NT L F+ I +N LK +
Sbjct: 331 -PAKGG--EQYVEAFKTAMDDDFNTPGALAVLFE-----IAREVNKLKTEDA-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E+ + +KE+ +LGL L+Q + LK +E ++ LI++R A+
Sbjct: 375 ETANGLAVCLKELAGVLGL---------LEQDPETFLKGDANDDEAAEIEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T WR
Sbjct: 426 AAKNWAVADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404487458|ref|YP_006711564.1| cysteinyl-tRNA ligase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|61216165|sp|Q65PC8.1|SYC_BACLD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52346452|gb|AAU39086.1| cysteinyl-tRNA ligase CysS [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 467
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 215/396 (54%), Gaps = 37/396 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L C PRV+++M++I D I +I+ AY +GDV++ YG+LS Q +
Sbjct: 101 VGSLGCTKADCHPRVTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ R+G R+ V +K + DF LWKAAK E SWDSPWG GRPGWHIECSAM+ YL
Sbjct: 161 DELRSGARIQVGEKKEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDS 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GG DL FPHHENEIAQS A YW+HNG++ +NEKMSKSLGNF + I
Sbjct: 221 IDIHAGGQDLAFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + P LR F++S HYR P+NYSV L++ +A + A S Q K++
Sbjct: 281 IKEHDPQVLRFFMLSVHYRHPINYSVELLENTKNA-------FGRLKTAYSNLQHRLKSS 333
Query: 241 -RINPAAEDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ + + K+ R F M DD NT++ ++ F D K N L Q K
Sbjct: 334 TNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHANYYL------QEKN 386
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+I++ ++ +E+ VL +LK EL ++D+ +LIE+R
Sbjct: 387 TAEHVIQAFIQLFDEICSVLGF-------------------SLKEQELLDKDIEELIEKR 427
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 428 NEARRNRDFATSDQIRDQLKSMNIILEDTPQGTRWK 463
>gi|423680487|ref|ZP_17655326.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
gi|383441593|gb|EID49302.1| cysteinyl-tRNA synthetase [Bacillus licheniformis WX-02]
Length = 467
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 215/396 (54%), Gaps = 37/396 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L C PRV+++M++I D I +I+ AY +GDV++ YG+LS Q +
Sbjct: 101 VGSLGCTKADCHPRVTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSV 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ R+G R+ V +K + DF LWKAAK E SWDSPWG GRPGWHIECSAM+ YL
Sbjct: 161 DELRSGARIQVGEKKEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDS 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GG DL FPHHENEIAQS A YW+HNG++ +NEKMSKSLGNF + I
Sbjct: 221 IDIHAGGQDLAFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + P LR F++S HYR P+NYSV L++ +A + A S Q K++
Sbjct: 281 IKEHDPQVLRFFMLSVHYRHPINYSVELLENTKNA-------FGRLKTAYSNLQHRLKSS 333
Query: 241 -RINPAAEDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ + + K+ R F M DD NT++ ++ F D K N L Q K
Sbjct: 334 TNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHANYYL------QEKN 386
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+I++ ++ +E+ VL +LK EL ++D+ +LIE+R
Sbjct: 387 TAEHVIQAFIQLFDEICSVLGF-------------------SLKEQELLDKDIEELIEKR 427
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 428 NEARRNRDFATSDQIRDQLKSMNIILEDTPQGTRWK 463
>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
Length = 440
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 216/392 (55%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++ AY EGDV++ ++ YG+LS Q + +
Sbjct: 79 LGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSHQPIADL 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 139 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 199 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 258
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y+P +R F++S HYR P+N+S L + ++ + I Y L+ + + +H
Sbjct: 259 YNPQLIRFFMLSVHYRHPINFSEELLQNTNNGLERIKTAYGNLKHRMESSTDLTDH---- 314
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F A M DD NT++ +T + A Q L
Sbjct: 315 --NEKWLAEMKKFQVAFEAAMDDDFNTANAVTELYNLA-------------NHANQYLLE 359
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
S +E VK+ + G+L L + EL +E++ LI++R AR
Sbjct: 360 EHTSKAVLEAYVKQFETLFGILGL-------------ELTKEELLDEEIEVLIQKRIEAR 406
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 407 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 438
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Bermanella marisrubri]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 218/393 (55%), Gaps = 38/393 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L L P +PR + H++ I M+ +I AY + GDV++ V K YG+LSG+
Sbjct: 101 FAKLNILTPNSEPRATQHIDGIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKI 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE +G R+AV+ K +P DF LWK+AK EPSWDSPWG GRPGWHIECS MS L +
Sbjct: 161 LEELESGARIAVEEEKEDPLDFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGN 220
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS AA + + WMH G + + EKMSKSLGNFFTIR
Sbjct: 221 NFDIHGGGPDLKFPHHENEIAQSEAATGEHYANTWMHAGALRIDGEKMSKSLGNFFTIRD 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
I E+Y +R FL S YRS +NYS L A + +Y + C++ +
Sbjct: 281 ILEKYDAEVIRFFLSSVQYRSAINYSEDGLKDAEAKLDRLYNAIHGCDL----------S 330
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A I+ + + R+ F A M DD NT + F D + IN KK+ ++ L
Sbjct: 331 AVIDE-QDAVVQDTRERFEAAMDDDFNTPKAIAVLF-DLVNEIN------KKEGAEKNPL 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAA 358
+ + + E+ ILG LQ D L+R ++ +Q I+ERA
Sbjct: 383 AAL---------LVELSSILG---------CLQSDPDNYLQRGVTLDDAYIQGKIQERAQ 424
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A+K+KDF+ +D+IR DL +GI L D + T W
Sbjct: 425 AKKDKDFALADKIREDLDAQGIILQDSREGTTW 457
>gi|390934101|ref|YP_006391606.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569602|gb|AFK86007.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 464
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 221/383 (57%), Gaps = 28/383 (7%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T+ PR ++++E+I + + ++I+ AY +G+V++ K +YG+LS + ++ +AG R+
Sbjct: 108 TFHPRATENIEEIIEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K+NP DF LWKAAK GEP WDSPWG GRPGWHIECS MS YL DIH GG D
Sbjct: 168 EVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS AA YWMH G++ NNEKMSKS NFFT+R + +Y P L
Sbjct: 228 LIFPHHENEIAQSEAANDAEFAKYWMHIGYLNINNEKMSKSKNNFFTVRDVISQYDPEVL 287
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ +HYR+P+NYS ++ A + T+ + L E + A ++
Sbjct: 288 RFFMLMSHYRNPINYSQDLIEQAKGGFLRLSNTVYNLRHLLD-VAEDRQLRDEEKAYKEK 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+ + +F M DD NT+ ++ F+ ++ INS+++ K+ + L + SL
Sbjct: 347 YEEYKRKFEEAMDDDFNTADAISVIFE-MVRDINSNIDGNSPKELIKYILDVFLSLSS-- 403
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+LG+ K+ +L ++++ +LIE+R ARK K+++++D
Sbjct: 404 --------VLGI----------------TYKKKDLLDDEIKELIEKRQEARKAKNWAEAD 439
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L ++GI L D W+
Sbjct: 440 RIRDELKKQGIVLEDTPNGVRWK 462
>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 468
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 214/392 (54%), Gaps = 20/392 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H++ I + + ++ AY V+F V K YG+LS L
Sbjct: 93 MKALKVKPADIYPRVTEHIQDIIEFVRKLEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNL 152
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS YL
Sbjct: 153 EDLRKGVRVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGES 212
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YW H G V + EKMSKSLGNF TIR++
Sbjct: 213 FDIHGGGNDLIFPHHENEIAQTEACTGKEWVKYWFHTGFVMVSGEKMSKSLGNFVTIREL 272
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+RY P +R F++ HYRSPL+Y+ + A + + +Y T+++ +A+ + K
Sbjct: 273 LQRYSPEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTIENIRIAMEKVEVPFKWE 332
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + I + + + M DD NT+ + F+ A +N+ L ++K PK+ L
Sbjct: 333 KEEFELYETIRDAKKKLYEAMDDDFNTAEAMKPIFEVA-NAVNAYLTKVEK--PKESVLR 389
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+I +EV G + E ++ K+ + +V R+A R
Sbjct: 390 KALEFFRIISEV-----------FGIFEEYFKEAKETKEEELIELLIEV------RSALR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K+F +D+IRA L GI L D + TIW+
Sbjct: 433 KQKNFELADKIRAQLRELGIQLEDTPQGTIWK 464
>gi|408481226|ref|ZP_11187445.1| cysteinyl-tRNA ligase [Pseudomonas sp. R81]
Length = 462
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 216/392 (55%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKA K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + + D LI+ R AAR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAQVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 TNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 225/387 (58%), Gaps = 31/387 (8%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLEN 62
+L P T+ PRV++ M++I +MI ++I AY + G V+F YG+LS + LE
Sbjct: 102 NLNVTPATHHPRVTEEMDRIIEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEE 161
Query: 63 NRAG--ERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
AG ERVA+ K+N DF LWK K GEP W+SPW GRPGWHIECSAM+ YL
Sbjct: 162 LEAGRSERVALTEEKKNHMDFVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDT 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GG DL+FPHHENEIAQS A YWMHN + +N+KMSKSLGNF T+R +
Sbjct: 222 IDIHAGGEDLVFPHHENEIAQSECANGKEFAHYWMHNAFLNIDNKKMSKSLGNFKTLRDV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y +R F+++AHYRSPLN+S ++SA +++ + +++ + LS EH + A
Sbjct: 282 GEMYGYDVVRFFMLNAHYRSPLNFSAELIESAKNSL----ERIKNAKATLSFALEHSQIA 337
Query: 241 RINPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ + + +L D FH M DD NT+ ++ F+ +KF N+ K+ Q
Sbjct: 338 DLTEEEKALLKELDDFKARFHEHMEDDFNTADAISIIFE-LVKFANTY-----AKEGASQ 391
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+E++ K+ NE+ + ILGL+ K L++E++ + IE+R
Sbjct: 392 --PFVEAVLKLFNELTD---ILGLI-----------YDRKGNNEDGLSDEEIKEYIEKRT 435
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMD 384
AA+K +DF+++D+IR L +G+ + D
Sbjct: 436 AAKKARDFAEADRIRDFLKDQGVLIED 462
>gi|420257596|ref|ZP_14760352.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515001|gb|EKA28780.1| cysteinyl-tRNA ligase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 461
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 211/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I + ++I + AYV GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + I +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------ITAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTTWR 459
>gi|374992959|ref|YP_004968458.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211325|gb|AET65943.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 452
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 225/392 (57%), Gaps = 24/392 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L +P T P+ ++H+ ++ ++I +I+ AY V+GDV+FAVE+ P+YG+LSG+ +E+
Sbjct: 79 LNLMPATVHPKATEHIPEMIEIIQGLIDTGLAYEVDGDVYFAVERFPDYGKLSGRTIEDM 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RK++P DFALWK AK GEP W SPWG GRPGWHIECSAMS YL + FDI
Sbjct: 139 KAGARVEVDERKKHPMDFALWKKAKPGEPFWQSPWGEGRPGWHIECSAMSLKYLGAGFDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL FPHHENEIAQ+ + + YWMHN +T N EKMSKSLGNFFTIR++ E
Sbjct: 199 HGGGEDLSFPHHENEIAQTEGYLKGETFARYWMHNAFLTINQEKMSKSLGNFFTIRELLE 258
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+R +L+ HYRSPL+++ L A + + +++ + AL+ K I
Sbjct: 259 NNPGEVIRFYLLGTHYRSPLDFNDQNLSMAQKGLERLQTSVRLAQEALNRSGTQ-KNDPI 317
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + + R F M DD N++ F+ A K +N + K+ Q
Sbjct: 318 HGGLVEAAQEARKAFEKAMDDDFNSALAYAALFELA-KTMNGHV-----KENSQSS---- 367
Query: 303 ESLRKIENEVKEVLRILG--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
E L + + E+ +LG LL P S ++ EL + + +++ R+ +R
Sbjct: 368 EGLAVAQKTLIELGGVLGFDLLHPAQVS----------VENEELLSQVMNVVLQIRSKSR 417
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ KD+ +D IR L KGI + D + W+
Sbjct: 418 QKKDWEMADFIRDSLKEKGIVIEDTPQGARWQ 449
>gi|453062355|gb|EMF03346.1| cysteinyl-tRNA ligase [Serratia marcescens VGH107]
Length = 461
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ + +P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT + F + +N LK + + +
Sbjct: 342 ---------FREAMDDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
I E++++ ++LGLL P + + Q+ D + E LI++R AR KD+
Sbjct: 380 IAAELRKLAKVLGLLQQEPEQFLQGGAQVDDGEVAEIE-------ALIKQRNEARAAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMNIVLEDGPQGTTWR 459
>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 463
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 215/396 (54%), Gaps = 37/396 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L C PRV+++M++I D I +I+ AY +GDV++ YG+LS Q +
Sbjct: 97 VGSLGCTKADCHPRVTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSV 156
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ R+G R+ V +K + DF LWKAAK E SWDSPWG GRPGWHIECSAM+ YL
Sbjct: 157 DELRSGARIQVGEKKEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDS 216
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GG DL FPHHENEIAQS A YW+HNG++ +NEKMSKSLGNF + I
Sbjct: 217 IDIHAGGQDLAFPHHENEIAQSEALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDI 276
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + P LR F++S HYR P+NYSV L++ +A + A S Q K++
Sbjct: 277 IKEHDPQVLRFFMLSVHYRHPINYSVELLENTKNA-------FGRLKTAYSNLQHRLKSS 329
Query: 241 -RINPAAEDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ + + K+ R F M DD NT++ ++ F D K N L Q K
Sbjct: 330 TNLTEGDSEWLEKIEEQRKAFQTAMDDDFNTANAISVLF-DLAKHANYYL------QEKN 382
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+I++ ++ +E+ VL +LK EL ++D+ +LIE+R
Sbjct: 383 TAEHVIQAFIQLFDEICSVLGF-------------------SLKEQELLDKDIEELIEKR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 424 NEARRNRDFATSDQIRDQLKSMNIILEDTPQGTRWK 459
>gi|386309410|ref|YP_006005466.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418240598|ref|ZP_12867136.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433550489|ref|ZP_20506533.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|351780011|gb|EHB22100.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431789624|emb|CCO69573.1| Cysteinyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 461
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 213/387 (55%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I + AYV GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ +V +P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F A M DD NT + F I +N LK + I +
Sbjct: 342 ---------FRAAMDDDFNTPEAYSVLFD-----IAREVNRLKAED--------ITAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQADGDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T+WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTVWR 459
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/390 (39%), Positives = 219/390 (56%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L + P ++P+ + HM +I +M+ ++++ AYV +GDV F+V YGRLSGQ ++
Sbjct: 103 LNMVRPDFEPKATLHMPEIIEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV +D K+NP DF LWK +K GEP+W+SPWG GRPGWHIECSAM+ +L + FD
Sbjct: 163 LQAGARVEIDHNKQNPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+YWMH G V + EKMSKSLGNFFTIR + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y +D ++ ++
Sbjct: 283 HYDAQTVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAFKDLDLTVTA---------- 332
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A++ + K F + M+DD NT + F D ++ IN + K +
Sbjct: 333 -APADEYVTK----FKSAMNDDFNTPEAYSVLF-DMVREIN---------RLKTTDMGAA 377
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
+L ++ +VL I+ S ++ + E+ E + LI ER AR
Sbjct: 378 SALGVSMKQLADVLGIV--------SVDIETFFKGSGSDDEVAE--IEALIVERNRARTE 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R L + G+ L D T W+
Sbjct: 428 KDWAAADVARDRLNQLGVVLEDGENGTTWK 457
>gi|410635575|ref|ZP_11346184.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
gi|410144873|dbj|GAC13389.1| cysteinyl-tRNA synthetase [Glaciecola lipolytica E3]
Length = 458
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 164/397 (41%), Positives = 210/397 (52%), Gaps = 45/397 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
A + L P +PRV+ H+ +I D+I ++I+ AY GDV F V YG+LS Q
Sbjct: 100 FAAINLLEPDIEPRVTTHIPEIIDVIQRLISKGHAYQAPSGDVLFDVSTYDQYGKLSKQD 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE AGERV V S K +P DF LWK K GEP W+SPWG GRPGWHIECSAM++ +L +
Sbjct: 160 LEQLNAGERVEVSSDKTDPLDFVLWKTVKPGEPYWESPWGEGRPGWHIECSAMNSKHLGT 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DLIFPHHENE+AQSC A V+YW+H G V + EKMSKSLGNFFT+R
Sbjct: 220 HFDIHGGGSDLIFPHHENEVAQSCCAFDTPYVNYWIHTGMVQVDQEKMSKSLGNFFTLRD 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + Y LR+FL+SAHYRS L+YS + A A+ +Y L+D + + G
Sbjct: 280 VLKDYDAETLRYFLMSAHYRSQLSYSEENIKQAKSALERLYTALRDSQPNFDVDMQQGDY 339
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ F + M DD NT F D +K IN K Q++
Sbjct: 340 LQ--------------RFESAMDDDFNTPEAFAVMF-DLVKDIN--------KSHGQEKS 376
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE----E 355
L L K+ ILG L QL A + + E D + +IE
Sbjct: 377 DLAGILLKLG-------AILGFL----------QLDPNAYLQGGIVESDEVSVIEGLIKA 419
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R AR +KD+ +D R LT G+ L D T WR
Sbjct: 420 RNDARADKDWIAADAARDALTAMGVVLEDGANGTTWR 456
>gi|423480234|ref|ZP_17456924.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
gi|401149239|gb|EJQ56714.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG6X1-2]
Length = 465
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 216/395 (54%), Gaps = 41/395 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A Q
Sbjct: 340 --NEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVA---------------NHANQYL 382
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
L E K+ GAY + L+ L D L + EL +E++ LI++R
Sbjct: 383 LEEHTSKV--------------VIGAYVKQLETLFDILGLELAQEELLDEEIETLIQKRI 428
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ SDQIR DL + I L D + T W+
Sbjct: 429 EARKNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 226/396 (57%), Gaps = 29/396 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L L +P+V+++M +I + I ++I N AY ++G+VFF V+K +YG+LS Q+++
Sbjct: 113 LNILQDIKRPKVTENMPEIIETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDEL 172
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
G RV + K NP DFALWK K GEP WDSPWG GRPGWHIECSAMS YL FDI
Sbjct: 173 EIGARVDIMEIKNNPLDFALWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDI 232
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS A YW+HNG V N +KMSKS GNFF +R+I +
Sbjct: 233 HGGGQDLIFPHHENEIAQSKCAYHGHFAKYWVHNGFVQVNGDKMSKSTGNFFLLREILGK 292
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ +R F++S HYR P+N+S +++ + + +++ E +L K+ ++
Sbjct: 293 FSGNVIRLFILSTHYRKPVNFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVS 352
Query: 244 PAAEDCINKLRDE--------FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK---K 292
+ INK+ E F M +D+NT L+ F D ++ N + ++K K
Sbjct: 353 DEKINEINKVFKEKIKSFDVKFIGAMDEDMNTPQALSTIF-DQIRETNRFCDDIEKILDK 411
Query: 293 QPKQQQLSLIESL----RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 348
+ L E+L + ++ ++++VL +L + +K + +L++
Sbjct: 412 ERNDSSFLLFEALELSYKNLKTKIEDVLGVL-------------LMDEKKENKDDLSKNL 458
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMD 384
+ LI+ R ARK K+FS SD+IR +L + G+ + D
Sbjct: 459 IELLIKIRTEARKEKNFSLSDEIRDELKKIGVEIKD 494
>gi|359440396|ref|ZP_09230316.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|359456073|ref|ZP_09245267.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
gi|392534096|ref|ZP_10281233.1| cysteinyl-tRNA ligase [Pseudoalteromonas arctica A 37-1-2]
gi|358037709|dbj|GAA66565.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20429]
gi|358046880|dbj|GAA81516.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20495]
Length = 459
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 215/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM++I M+ ++I AYV +GDV F V YG LS Q L
Sbjct: 103 LNMLRPDIEPTVTSHMDEIIVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV V K +P DF LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQSGSRVEVAQDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSL NFFT+R++ +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P ++R+FLIS HYRS LNYS LD A ++ IY L+D E +
Sbjct: 283 AYDPESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVEPVECDLEG------- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
N+ +F M+DD NT L F+ + LN +K+ Q QL+
Sbjct: 336 --------NEFVAKFRKAMNDDFNTPEALPVLFE-----LAKELNRVKESDAVQAGQLAF 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I LR I N +LG V QQ + L+ + +E + LI +R A
Sbjct: 383 I--LRSIGN-------VLG---------VAQQAPEAFLQGGQDDDEVATIEALIVKRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K+++ +D+ R L G+ L D +T WR
Sbjct: 425 RASKNWAAADEARDALNALGVILEDSAGKTTWR 457
>gi|423556914|ref|ZP_17533217.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
gi|401194229|gb|EJR01221.1| cysteinyl-tRNA synthetase [Bacillus cereus MC67]
Length = 465
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 221/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKIFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLETLFSILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+N+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 QNRDFALSDQIRDDLKGRNIILEDTAQGTRWK 463
>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
gi|169257998|gb|EDS71964.1| cysteine--tRNA ligase [Anaerofustis stercorihominis DSM 17244]
Length = 468
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 223/386 (57%), Gaps = 33/386 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRVS+ + I D+I+ + N AY V+G+V++ V K +YG+LS + ++ +G RV
Sbjct: 108 TVHPRVSECIGDIIDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARV 167
Query: 70 AVDSRKRNPADFALWKAAKA-GEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGI 128
V+ K +P DFALWK K E ++DSPWG GRPGWHIECSAMS YL S DIHGGG
Sbjct: 168 EVNDEKESPLDFALWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGE 227
Query: 129 DLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLA 188
DLIFPHHENEIAQS A V Y++HNG++ NNEKMSKS GNFF +R I++ +
Sbjct: 228 DLIFPHHENEIAQSEGANGKDFVHYFVHNGYININNEKMSKSKGNFFMVRDISKDFDLEV 287
Query: 189 LRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED 248
+R F++SAHY++P+N+S L + +Y T ++ L + K + ++
Sbjct: 288 VRLFMLSAHYKTPVNFSFDILKQTQSGLNRLYNTKENLLYLL----DKAKDKDLKEDEKE 343
Query: 249 CIN---KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
IN K R+EF M DD+NT++ ++ + D K INS++N K+ + + L
Sbjct: 344 FINSLPKYREEFKNAMEDDINTANAVSTIY-DLSKDINSNVNENSSKEMIMKSYEMYMEL 402
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+LGLL E+L E+++++LIE+R ARKNKDF
Sbjct: 403 NG----------VLGLLTKEKEDEIL--------------EDEIIELIEKRQNARKNKDF 438
Query: 366 SKSDQIRADLTRKGIALMDMGKETIW 391
+ +D+IR DL KGI L D + W
Sbjct: 439 ALADKIRDDLLDKGIVLEDTREGVKW 464
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 212/398 (53%), Gaps = 46/398 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L LPP +PRV+ HM +I ++I +++ AYV GDV F V +YG LS Q
Sbjct: 100 FAALNLLPPDIEPRVTTHMAEIIEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQD 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L+ ++G RVAV K +P DF LWK AKA EPSW SPWG GRPGWHIECSAM+ +L
Sbjct: 160 LDQLQSGARVAVADGKDDPMDFVLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGK 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENE+AQSC A V+ W+H G V +NEKMSKSLGNFFT+R
Sbjct: 220 HFDIHGGGSDLTFPHHENEVAQSCCAFDTPYVNTWVHTGMVQVDNEKMSKSLGNFFTLRS 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEV-ALSPFQEHGK 238
+ E++H LR FL+SAHYRS L+YS L+ A + +Y L+D + + G
Sbjct: 280 VLEQHHKETLRFFLMSAHYRSQLSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGY 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
AR F A M+DD NT + F A LN K P +
Sbjct: 340 LAR---------------FEAAMNDDFNTPIAFSVLFDCA-----KDLNKAKSTDPAEA- 378
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKAL----KRAELTEEDVLQLIE 354
+ + +VL LG +L L+D + A++ E V LI
Sbjct: 379 -----------SRLAQVLISLG--------AILGCLQDDPVNFLQSDADIDGEAVAALIA 419
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+R AR +KD+ +D R LT G+ + D T WR
Sbjct: 420 QRNQARADKDWGAADAARDALTAMGVVIEDSATGTTWR 457
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 219/392 (55%), Gaps = 32/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P PR ++H+ + + I ++I+ AYVV+G+V+F K P YG+LS Q
Sbjct: 103 LNIRPADVHPRATEHITDMIEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEI 162
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG RV V+ KRNP DF LWKA K GEP+WDSPWG GRPGWH+ECS MS YL DI
Sbjct: 163 EAGARVEVNESKRNPMDFVLWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDI 222
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS + +W+HNG++ + +KMSKSLGNFFT+R I++
Sbjct: 223 HGGGQDLIFPHHENEIAQSESLTGKPLARFWLHNGYINVDGQKMSKSLGNFFTVRDISKE 282
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++ +HYRSP+N+S L+ A +A+ +Y + + L + + ++
Sbjct: 283 YDLETVRIFMLLSHYRSPINFSHQLLEQAKNALARLY----NVKFRLEDIKNSSDISAVS 338
Query: 244 PAAEDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
IN + R +F M DD+NT+ + F A +N+L + S
Sbjct: 339 EQERAFINDMPRYRQKFIEAMDDDMNTASAMGVIFDLA-----KDVNILMADGASAEFAS 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + +KE+ ++GLL KD A + + ++ Q+I++R AR
Sbjct: 394 ------EASDMLKELTGVMGLL-----------YKDSACSQ---LDNEIEQMIQKRQQAR 433
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
N+D++ +D+IR +L GI L D + W+
Sbjct: 434 ANRDWATADRIRDELKAMGIVLEDTPQGVRWK 465
>gi|440229808|ref|YP_007343601.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051513|gb|AGB81416.1| cysteinyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 461
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 209/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ +++ D AYV GDV F+++ P YG LS Q LE +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLLERDHAYVASNGDVMFSIDSDPQYGLLSRQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLNNFFTIRDVLGYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ + A P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDPAAQPAGGEAFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT + F + +N LK + E LRK
Sbjct: 342 ---------FREAMDDDFNTPEAYSALFD-----LAREVNRLKSEDMAAANAMAAE-LRK 386
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ N +LGLL P A+ + Q D + E LI++R ARK+K++
Sbjct: 387 LAN-------VLGLLQQEPEAFLQSGAQADDGEVAEIE-------ALIKQRNDARKSKEW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADAARDRLNEMGIVLEDGPQGTTWR 459
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 213/387 (55%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I + AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 120 PDLEPRATHHIPEIIELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGA 179
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV + KRNP DF LWK +K GEPSW+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 180 RVEIADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 239
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E Y
Sbjct: 240 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEYYDAE 299
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ +V +P AR
Sbjct: 300 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEAR------ 353
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F A M DD NT + F + +N LK + I +
Sbjct: 354 ---------FRAAMDDDFNTPEAYSVLFD-----LAREVNRLKTED--------ITAANG 391
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q + + E LI++R AR +KD+
Sbjct: 392 LAAELRKLAHVLGLLEQDPELFLQSGAQSDGDEVAKIE-------ALIKQRNDARSSKDW 444
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 445 ALADSARDQLNELGIVLEDGPQGTTWR 471
>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
Length = 447
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 210/393 (53%), Gaps = 52/393 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE
Sbjct: 101 AQLGVKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSKNYAKLANKTLE 160
Query: 62 N---NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+ +G A +RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 161 DLEIGASGRTDAETARKENPLDFALWKAAKEGEISWDSPWGPGRPGWHIECSVMATEILG 220
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+
Sbjct: 221 DTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVH 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + LR FL + YR P+N++ + + D EV L +
Sbjct: 281 DMLKTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHS 326
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ + D F M DD NT++ +T F D K+INS
Sbjct: 327 LPLTGQVDQAELQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------- 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +++ ++VL++ G++ + E+ +ED+ +LIEER A
Sbjct: 373 ----HYDQTVKDAFEKVLQVFGIVF-----------------KEEVLDEDIEKLIEERQA 411
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR NKDF+ +D+IR +L +GI L+D W
Sbjct: 412 ARANKDFATADRIRDELAAQGIKLLDTKDGVRW 444
>gi|344199257|ref|YP_004783583.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
gi|343774701|gb|AEM47257.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrivorans SS3]
Length = 462
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 220/393 (55%), Gaps = 40/393 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L C P +PR ++H+ ++ +I ++IN AY GDV++AV P YGRLSG+ +
Sbjct: 106 AALLCQRPDQEPRATEHVGAMQTLIGELINRGHAYAAANGDVYYAVRSFPEYGRLSGKSI 165
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +G RV V KR+P DFALWKAAK GEPSW SPWG GRPGWHIECSAMSA L
Sbjct: 166 DELTSGARVDVGEDKRDPLDFALWKAAKPGEPSWPSPWGEGRPGWHIECSAMSADALGCA 225
Query: 121 FDIHGGGIDLIFPHHENEIAQS-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A C ++ YWMHNG V N+EKMSKSL NFFT+R+
Sbjct: 226 FDIHGGGADLQFPHHENEIAQSQGAGCAFAH--YWMHNGFVRINDEKMSKSLNNFFTVRE 283
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ RY LR F++S+HYRSPLNY L+ A + +Y L+ G+
Sbjct: 284 LLPRYSGEVLRFFILSSHYRSPLNYGEEALEQAKAGLTRLYTALRGMP---------GRK 334
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ +E R+ FHA MSDD +T L F + +N L+ +
Sbjct: 335 IVVELGSE-----WRERFHAAMSDDFHTPAALAVLFD-----LAREMNRLRDEGS----- 379
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
E + ++E+ +LGL LQQ + L+ + + I RAAA
Sbjct: 380 ---EVAAPLATLLRELAGVLGL---------LQQDAEDFLRGDATNTHWIEERIAARAAA 427
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R+ +DF+ +D IR +LT G+ L D T WR
Sbjct: 428 RRTRDFAGADGIRQELTAAGVILEDGPGGTTWR 460
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1.1|SYC_JANMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/398 (41%), Positives = 224/398 (56%), Gaps = 45/398 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR ++++ Q+ +I + N AY +GDV ++V P YG+LSG+ L
Sbjct: 103 AALGVQKPDHEPRATNYVPQMLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERV V++ KR+P DF LWK++K EP W S WG GRPGWHIECSAM+ L
Sbjct: 163 DDLRAGERVDVNTGKRDPLDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+FDIHGGG DL FPHHENEIAQS A Q + V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GQQFDIHGGGADLQFPHHENEIAQSEGASQHTFVNYWMHNGFVRVDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R++ +Y +R F++ AHYRS LNYS LD A +A+ +Y L+ ++P Q
Sbjct: 283 REVLAKYDSEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALK----GVAPDQ--- 335
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
AA D F M+DD NT + F+ + + +N K +Q
Sbjct: 336 -------AALDMTEAHALRFAEAMNDDFNTPLAVAVLFE-----LANEINKTKSPALARQ 383
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED--VLQLIEE 355
+ L I+GLL A QQ L E E + V++ IE
Sbjct: 384 LVGLAG--------------IVGLLQRPA-----QQFLHAGLANGEDGEMETFVVEQIEA 424
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
R A+K K+F+++D+IRA+L KGI L D G T WR
Sbjct: 425 RVNAKKAKNFAEADRIRAELLEKGIILEDKPGGLTEWR 462
>gi|407364085|ref|ZP_11110617.1| cysteinyl-tRNA ligase [Pseudomonas mandelii JR-1]
Length = 460
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 213/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ ++ MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMQTMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK AK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKGAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGL-------------P 327
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ PA + + F M+DD T F+ + +N L++ S
Sbjct: 328 SVAPAGGEA---FVERFTQVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLNAAAGLAARLKELASVLGVLQ----LEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|387902615|ref|YP_006332954.1| cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
gi|387577507|gb|AFJ86223.1| Cysteinyl-tRNA synthetase [Burkholderia sp. KJ006]
Length = 465
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 221/396 (55%), Gaps = 40/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P +PR + + Q+ MI Q+ N AY +GDV ++V K NYG+LSG+ L
Sbjct: 103 AALGIQRPDIEPRATQFIPQMLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERVA + K +P DF LWK AKA +P SW S +G GRPGWHIECSAM L
Sbjct: 163 DDLRAGERVAANDAKEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GEHFDIHGGGQDLQFPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R++ ERY +R F++ HYRSPLNYS + LD A ++ +Y L+D E
Sbjct: 283 REVLERYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEP--------- 333
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ A D F A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 334 -----DALALDWNEPYAQRFAAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQL 387
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L R+ P A+ LQQ A + L +++ I R
Sbjct: 388 AGLLGLLGRE----------------PRAF---LQQGAGSA-QAGALAADEIEARIAARV 427
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
AA++ KD++++D+IRA+L GIAL D G T WR
Sbjct: 428 AAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWR 463
>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
Length = 420
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 157/395 (39%), Positives = 216/395 (54%), Gaps = 41/395 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 59 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 118
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 119 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 178
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 179 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 238
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 239 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 294
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A Q
Sbjct: 295 --NEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVA---------------NHANQYL 337
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
L E K+ GAY + L+ L D L + EL +E++ LI++R
Sbjct: 338 LEEHTSKV--------------VIGAYVKQLETLFDILGLELAQEELLDEEIEALIQKRI 383
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ SDQIR DL + I L D + T W+
Sbjct: 384 EARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 418
>gi|399055784|ref|ZP_10743434.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|433543315|ref|ZP_20499725.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398046647|gb|EJL39241.1| cysteinyl-tRNA synthetase [Brevibacillus sp. CF112]
gi|432185444|gb|ELK42935.1| cysteinyl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 468
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 222/395 (56%), Gaps = 38/395 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LPP QPRV + +I + +I AY EGDV+F + YG+LS Q L++
Sbjct: 104 LNVLPPDIQPRVMQTIPEIISFVEGLIEKGYAYESEGDVYFRTGRFQEYGKLSHQPLDDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV ++ +K +P DFALWK+AK GE +W SPWG GRPGWHIECSAM+ +L + DI
Sbjct: 164 QAGARVEINEKKEHPLDFALWKSAKEGEVTWSSPWGEGRPGWHIECSAMALKFLGEQIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL+FPHHENEIAQS YW+HNG + +NEKMSKSLGNF R ++++
Sbjct: 224 HAGGTDLVFPHHENEIAQSECFTGKVFARYWLHNGMLNIDNEKMSKSLGNFLLARDLSKK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI- 242
+ +R F++ HYR+P+N+S L+ A++ L+ + A + TAR
Sbjct: 284 FGGQLIRFFMLQGHYRNPINFSEELLEQAANG-------LERIKTAYTNLSHRLDTARDE 336
Query: 243 --NPAAED---CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
N AE+ IN+LR+ F M DDLNT++ +T F D +K N L + Q
Sbjct: 337 EPNGQAEEQQRIINELRERFITEMDDDLNTANAITVIF-DVVKEANLYL--------RHQ 387
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ E +R + E+ +LGL E+ ++ EL + ++ LI ER
Sbjct: 388 NVGAGE-VRAYMELLVELTEVLGL-------EIAEE--------QELVDSEIDALIAERT 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+F++SD+IR L KGI L D + WR
Sbjct: 432 EARKAKNFARSDEIRDLLAAKGIVLEDTPQGVRWR 466
>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 469
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 226/399 (56%), Gaps = 37/399 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQR 59
M + LP T P ++ ++ +++MI +I AYV +G V+F V+ +YG+LS +
Sbjct: 99 MEAMNVLPATKNPLATEEIDGMEEMIGSLIEKGHAYVAKDGTVYFRVKSFEDYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
++ ++G R V + K + DF LWK K GEP WDSPW GRPGWHIECS MS Y
Sbjct: 159 IDELQSGFREIKVKGEEDKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIHGGG DLIFPHHENEIAQS +A S +YWMHN + +N+KMSKSLGNFFT
Sbjct: 219 LGDQIDIHGGGEDLIFPHHENEIAQSESASGKSFANYWMHNAFLNIDNKKMSKSLGNFFT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R I+E+Y LR F++SAHYRSPLN+S ++++ +++ I +++ + Q+
Sbjct: 279 VRDISEKYDLQVLRFFMLSAHYRSPLNFSAELMEASKNSLERILTGVEN----IKDVQKR 334
Query: 237 GKTARINPAA---EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQ 293
I A + L+D+F M DD NT+ +T F+ +K N+SLN
Sbjct: 335 NNADAITDAELSNLEIAKVLKDKFVIAMDDDFNTADAITAIFE-LIKLSNTSLN------ 387
Query: 294 PKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
+ S +E + N + + LG++ ++ E+ + ++ LI
Sbjct: 388 ----EKSTVEYANGLLNIILPLCDTLGIITE---------------RKVEILDSEIEDLI 428
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E+R +ARKNKDF+ +D+IR +L GI L D + W+
Sbjct: 429 EQRTSARKNKDFALADKIRNELLEMGIVLEDTREGVKWK 467
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 226/399 (56%), Gaps = 17/399 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M ++ P +PRV++HM++I D+I +I AY +GDV+F+V +YG+LS +
Sbjct: 99 MEAIRVKPADVEPRVTEHMKEIVDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSP 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG RV +KR+P DFALWK+AKAGEPSWDSPWG GRPGWH EC AM +L
Sbjct: 159 EEMEAGARVEPSEKKRDPLDFALWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGET 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DL+FPHHENEIAQ+ A YWMHNG VT +KMSKSLGN+ T+++I
Sbjct: 219 IDIHGGGLDLVFPHHENEIAQAEAVTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEI 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YHP LR ++ HYRSPL++S +++ A + ++D EV L +
Sbjct: 279 YTKYHPDILRLLVLFTHYRSPLDFSWEKMEETQRAYDRLKGAIEDYEV-LKELEVIPGKG 337
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+P D + ++ + F +SDD NT L+ F + S L +K + + ++
Sbjct: 338 GAHPLY-DKVKEVEESFFESLSDDFNTPEALSHIFS-----LVSELGKVKNRTYSEGKID 391
Query: 301 LIE------SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LI 353
E + R + N +K++ +L L P ++++ ++ L+ E+ + ++ LI
Sbjct: 392 ESELGAYEYASRFLLNTLKKIFGLLEDLYPEC---EVRRVVERELEAGEVLDTKLVDLLI 448
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
E R AR+ K F +D IR L GI L D T W+
Sbjct: 449 EVRTLARQEKQFRIADLIRDRLKELGIELEDTPAGTRWK 487
>gi|451965977|ref|ZP_21919232.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
gi|451315226|dbj|GAC64594.1| cysteinyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 211/392 (53%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + H+ +I ++ Q+I AYV GDV FAV+ P+YG LS Q LE
Sbjct: 103 LNIARPDVEPRATHHIAEIIALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L S FD
Sbjct: 163 LQAGARVEVAEVKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A + V+YWMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+ G A
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALR------------GTDATA 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PAA++ F A M DD NT + F A +N LK + +
Sbjct: 331 QPAADEAFEG---RFRAAMDDDFNTPEAYSVLFDMA-----REVNRLKGED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ +++ + +LGLL P A+ + D + E LI++R AR
Sbjct: 375 AQANALAAQLRRLAGVLGLLEQDPDAFLQSGASADDGEAAQIE-------ALIKQRNDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++++D R L GI L D + T WR
Sbjct: 428 AAKDWARADDARDQLNALGIVLEDGPQGTTWR 459
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0.1|SYC_BURVG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 221/396 (55%), Gaps = 40/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P +PR + + Q+ MI Q+ N AY +GDV ++V K NYG+LSG+ L
Sbjct: 103 AALGIQRPDIEPRATQFIPQMLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEP---SWDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERVA + K +P DF LWK AKA +P SW S +G GRPGWHIECSAM L
Sbjct: 163 DDLRAGERVAANDAKEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GEHFDIHGGGQDLQFPHHENEIAQSEGATGQTFVNYWMHNGFVQVDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R++ ERY +R F++ HYRSPLNYS + LD A ++ +Y L+D E
Sbjct: 283 REVLERYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEP--------- 333
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ A D F A M+DD+NT + F+ A + +N + + +Q KQ
Sbjct: 334 -----DALALDWNEPYAQRFAAAMNDDINTPVAVATLFELAGE-VNRTRDASLARQLKQL 387
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L R+ P A+ LQQ A A L +++ I R
Sbjct: 388 AGLLGLLGRE----------------PRAF---LQQGAGSAHAGA-LAADEIEARIAARV 427
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
AA++ KD++++D+IRA+L GIAL D G T WR
Sbjct: 428 AAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWR 463
>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
gi|187629852|sp|A5W458.1|SYC_PSEP1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
Length = 460
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 210/393 (53%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTRCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F + +N L+ P
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLFD-----LVREINRLRDSDP-------- 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDSKGTTTWR 457
>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 468
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/395 (42%), Positives = 218/395 (55%), Gaps = 34/395 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRL 60
A L P T PR + ++ I +MI +I AY VEG DVFF V+ P YG+LS + L
Sbjct: 102 ARLNVKPATIYPRATQEIDTIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSL 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ AG R+ VD RK NP DFALWK AK GEP+WDSPWGPGRPGWHIECSAM +L +
Sbjct: 162 DEMMAGARIEVDPRKENPMDFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDR 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIHGGG DLIFPHHENEIAQS A Q+ +W+HNG + EKMSKSLGN TIR+
Sbjct: 222 IDIHGGGADLIFPHHENEIAQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRE 281
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ--EHG 237
+ ER A R ++S+HYRSPL +S +DSA + + ++ + A +P +H
Sbjct: 282 LLERGDGEAFRFLVLSSHYRSPLTFSDEAMDSARRGLARLQSAVRGFDPATAPATAPDHA 341
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
ARI ++ R EF A M DDLNT L+ F+ A + IN +
Sbjct: 342 -LARIA-------DETRAEFRAAMDDDLNTPVALSHLFELA-RAINRERDAGAPAAAVAY 392
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
S++ KE+ +LGL E Q D+A+ E V L+E RA
Sbjct: 393 AQSVL----------KELAGVLGLT-----LETTTQRTDEAI------EPFVDLLLEVRA 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK + + +D+IR L GI + D + + WR
Sbjct: 432 ELRKQRLWDLADRIRVRLGELGIRVEDTAQGSTWR 466
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 220/392 (56%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I M+ ++I N AYV +GDV F VE P YG LS Q L+
Sbjct: 103 LNILRPDVEPRATHHIPEIIAMVEKLIANGHAYVAADGDVMFDVESFPKYGALSRQNLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S K+NP DF LWK +K EPSW+SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGKGRPGWHIECSAMNSKELGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H G +T + EKMSKSLGNFF+IR + +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHHGDYVNYWLHTGMLTIDREKMSKSLGNFFSIRYMLD 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +LR+F ++AHYRS L+YS+ L+ A A+ +Y L+ C++ +
Sbjct: 283 LYDAESLRYFFLTAHYRSLLDYSIDNLNLARSALERLYTALRGCDLTV------------ 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + F M DD NT L F+ I +N LK +
Sbjct: 331 -PAKGG--EQYVEAFKIAMDDDFNTPGALAVLFE-----IAREVNKLKTEDA-------- 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E+ + +KE+ +LGL L+Q + LK +E ++ LI++R A+
Sbjct: 375 ETANGLAVCLKELAGVLGL---------LEQDPETFLKGGANDDEAAEIEALIKQRNEAK 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D++R L I L D T WR
Sbjct: 426 AAKNWAIADEVRDKLKAMNIVLEDTPNGTTWR 457
>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 220/383 (57%), Gaps = 32/383 (8%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PR ++ ++++ + I + + D AYV++GDV+F + K+ +YG+LS + ++ AG R+
Sbjct: 109 TINPRATEMIKEMIEFIKILESKDAAYVLDGDVYFDINKAKDYGKLSKKNIDELMAGARI 168
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V KRNP DF LWK K GEPSW+SPW GRPGWHIECS M+ L DIH GG D
Sbjct: 169 GVAEGKRNPGDFVLWKKKKEGEPSWESPWSEGRPGWHIECSVMAKTILGDTIDIHSGGED 228
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
L FPHHENEIAQS A + +YW+HNG + +NEKMSKS GNFFTIR++++ Y L
Sbjct: 229 LQFPHHENEIAQSETANGKTFANYWLHNGMINVDNEKMSKSKGNFFTIREVSKEYDLEVL 288
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R+FL++ HYRSP+N+S +D ++ +Y + E + E+ ++ ++
Sbjct: 289 RYFLLTCHYRSPINFSHEVMDQCKASLERMYNAKEKLEKLI----ENANAGSLDEEVKEL 344
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ F M DD+NT+ LT F + +K IN+ ++ K E+L +
Sbjct: 345 VDAEVKYFEDAMEDDINTADALTAIF-NIVKIINTKVDDSSK-----------ETLEYVR 392
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
+ + ++ ++LG+L + K++ L E L ER ARKNKD++KSD
Sbjct: 393 DSLNKLSKVLGIL----------ERKEEGLSPEEEA------LFYERLEARKNKDYAKSD 436
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
++R L GI + D + T W+
Sbjct: 437 ELRDKLLAMGIEVKDSREGTTWK 459
>gi|386825986|ref|ZP_10113101.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386377168|gb|EIJ17990.1| cysteinyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALR------------GTNANAQPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F + +N LK + + +
Sbjct: 336 EAFEA---RFREAMDDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D + E LI++R ARK KD+
Sbjct: 380 LAAELRKLAKVLGLLQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMSIVLEDGSQGTTWR 459
>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 482
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/381 (40%), Positives = 217/381 (56%), Gaps = 15/381 (3%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM+ I MI+++I N AY ++GDV++ V+ +YG LS + L++ AG R+ VD
Sbjct: 115 PRVSEHMDDIIAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIEVD 174
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWKAAK EPSWDSPWG GRPGWHIECSAMS YL FD HGGG DLIF
Sbjct: 175 DRKENPMDFALWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIF 234
Query: 133 PHHENEIAQSCAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQ+ A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y P ALR+
Sbjct: 235 PHHENEIAQTEACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSPDALRY 294
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
FLIS HYRSPL++S +L + ++ + + + L Q G + ++ A
Sbjct: 295 FLISNHYRSPLDFSDERLTEMTRSLERLGTAIDNTLWLLE--QPSGGKSELSAALLADAQ 352
Query: 252 KLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIENE 311
+ ++F M DD NT+ F+ A K + + P + L +++
Sbjct: 353 RTMEDFETAMCDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAV-----LSEVKRI 407
Query: 312 VKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQI 371
K + ILG+L + KA + DV ++E R R K ++ +D I
Sbjct: 408 FKTMTDILGVL-----EDRWNGTAGKADDKDYAALMDV--ILELRQECRAQKQYALADAI 460
Query: 372 RADLTRKGIALMDMGKETIWR 392
R L+ GI + D + W+
Sbjct: 461 RDKLSDLGITIEDSPQGARWK 481
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 215/392 (54%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AYV + GDV F+VE +YG LS Q L
Sbjct: 103 LNILRPDLEPRATRHIPEIIELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + +
Sbjct: 223 IHGGGADLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ G A +
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALR------------GTDASV 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+PA + F M+DD NT + F A +N L K + LS
Sbjct: 331 SPAGGEVFEA---RFIEAMNDDFNTPEAYSVLFDMA-----REINCL-----KSEDLSAA 377
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L + ++++ ILGLL P + Q+ D+ + + E LI++R AR
Sbjct: 378 NGLAAV---LRKLAGILGLLEQDPEQFLHSGVQVDDEDIAKIE-------ALIKQRNDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNKD++ +D R L GI L D + T WR
Sbjct: 428 KNKDWTLADSARDQLNEMGIELEDGPQGTSWR 459
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|452121220|ref|YP_007471468.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|451910224|gb|AGF82030.1| cysteinyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 211/392 (53%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I ++ +I AYV + GDV F V P YG+LS Q LE
Sbjct: 103 LNILRPDSEPRATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSLGNFFT+R + +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A ++ +Y L+ + + +P AR
Sbjct: 283 YYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARF 342
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
A M+DD NT + F A +N LK + ++
Sbjct: 343 VEA---------------MNDDFNTPEAYSVLFDMA-----REVNRLKGEDMTAAN-AMA 381
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
LRKI +LGLL P + + Q D + E LI++R AR
Sbjct: 382 SHLRKISG-------VLGLLEQEPDVFLQSGAQADDGEVAEIE-------ALIQQRLDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K KD++ +D R LT GI L D + T WR
Sbjct: 428 KAKDWTAADAARDRLTEMGIILEDGPQGTTWR 459
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 221/387 (57%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I AYV GDV F V+K YG+LS Q LE +AG
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +DS KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDIDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ +V +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + + F M+DD NT + F+ A +N +K + IE
Sbjct: 337 EYVTR----FSTAMNDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASA 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ I+G+L P A+ + D A E+ E + LI+ R +R +KD+
Sbjct: 380 LGALMRELADIIGILHQDPEAFLQ-----GDAAGNDDEVAE--IEGLIKLRNDSRASKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ANADLARDKLNELGIVLEDGPEGTTWR 459
>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|123050340|sp|Q0VML5.1|SYC_ALCBS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
Length = 460
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 216/392 (55%), Gaps = 35/392 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L P+ P+ +DH+ ++ MI ++ AY +G V FAVE P+YG+LSG++L
Sbjct: 101 MASLNAKTPSIIPKATDHIPEMIQMIAILVEKGHAYEADGQVLFAVESMPDYGKLSGRKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+P DF LWK + +P WDSPWG GRPGWHIECSAM +L
Sbjct: 161 EDMLAGARVEVADYKRHPGDFILWKPSTDEQPGWDSPWGRGRPGWHIECSAMIHKHLGDV 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQ C A V YW+HNG++ + EKMSKSLGNF +R +
Sbjct: 221 IDIHGGGQDLIFPHHENEIAQGCCAHGTDYVRYWLHNGYINIDGEKMSKSLGNFRLVRDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YH LR L+S+HYRSPLN+S LD+A + +Y L ++P E G
Sbjct: 281 LTQYHGETLRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAP--EAGYQL 338
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQL 299
N D + DDLNTS ++ AL I LN + +PK +
Sbjct: 339 PDNHPVLDA-----------LKDDLNTSEAVS-----ALHAIAGELNKAELDDKPKLKAE 382
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
L + V+ P A+ ++K + L+ + + L+EER A
Sbjct: 383 LLAAADLLGLLTVE----------PTAW------FQNKNVSEDGLSNDAIDALVEERTQA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+K+K+F+++D+IR LT+ GI L D + T W
Sbjct: 427 KKDKNFARADEIRQQLTKAGIQLEDTREGTRW 458
>gi|359780008|ref|ZP_09283235.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
gi|359372624|gb|EHK73188.1| cysteinyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
Length = 461
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 211/392 (53%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L P +PR +DH++ + MI +I+ AY GDV++ V + YG+LS +R+
Sbjct: 102 ARLNIRKPDQEPRATDHIDGMHAMIQTLIDKGYAYAAGNGDVYYRVNRFAGYGKLSRRRV 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ K +P DF LWKAAK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 162 EDLRIGARIEPGEAKEDPLDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSTCCLGET 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + W+H G +T N EKMSKSLGNFFT+R++
Sbjct: 222 FDIHGGGNDLEFPHHENEIAQSEAATGKTYANAWLHCGMITINGEKMSKSLGNFFTLREV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ LI++HYRSP+NYS L A A+ Y +L+ A + E
Sbjct: 282 LEKYHPEVVRYLLIASHYRSPINYSEDNLREAKGALERFYHSLKGLPQAPAKGGE----- 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ F M DD NT+ F+ + +N L++ P
Sbjct: 337 -----------GYAERFAQCMDDDFNTAGACGVLFE-----LAREINRLRESDPAAAAGL 380
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
E+ EVL +L L P L+ A R + E V LI+ R AAR
Sbjct: 381 AGRL-----RELGEVLGVLQLEPEAF-------LRADAAGRVDAAE--VEALIQARLAAR 426
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR LT G+ L D T WR
Sbjct: 427 AEKNWAESDRIRDQLTALGVVLEDGKGGTTWR 458
>gi|385800588|ref|YP_005836992.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/399 (40%), Positives = 229/399 (57%), Gaps = 31/399 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ + P RVS+++ +I +M+T +I AY V G+V+F+VE +YG+LSG+ L
Sbjct: 100 LREFNVKPADKYLRVSENVAEIIEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +AG R+AV+ KRNP DF LWK ++ E WDSPWG G PGWHIECSAMS L S
Sbjct: 160 DEMQAGARIAVNKEKRNPLDFGLWKKVES-ETGWDSPWGEGWPGWHIECSAMSMKRLGST 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DLIFPHHENEIAQS A V+YW+HNG V + EKMSKS GNFFT R++
Sbjct: 219 FDIHGGGVDLIFPHHENEIAQSEAYSDQKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREV 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ + +R+FL++ HYRSP+++S +L+ A+ ++ I T + LS
Sbjct: 279 LKEFSAEVVRYFLLTRHYRSPIDFSYEKLEEAATSLTRIKNTRKQLAKVLS--------L 330
Query: 241 RINPAAEDCINK--------LRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
IN AAE+ I + + EF A + DD NT+ + G D INS +N K+
Sbjct: 331 DINSAAENKIEQEFFENIISKKKEFIAALKDDFNTAEAI-GVIHDLAGEINSYINR-KEF 388
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
++ +L+ KI E++ ILGL +L+ + +EL V L
Sbjct: 389 DLNEKNFALLTKTEKI---FLELIEILGLEF---------KLESASESESELVSPLVNLL 436
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
I+ R AR+NK++ ++D IR L GI ++D T W
Sbjct: 437 IKLRNKARENKNWQEADLIRDQLEEIGIEVIDSPHGTEW 475
>gi|410727955|ref|ZP_11366148.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
gi|410597515|gb|EKQ52126.1| cysteinyl-tRNA synthetase [Clostridium sp. Maddingley MBC34-26]
Length = 466
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 226/392 (57%), Gaps = 33/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L+ T PR ++++ I + ++I AY V+GDV+++ +K YG+L GQ LE+
Sbjct: 102 LRIERATINPRATEYITDIIKFVEELIAAGFAYEVDGDVYYSTKKFSGYGKLVGQNLEDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R++VD RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DI
Sbjct: 162 QAGARISVDERKKDPMDFAVWKAQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG+DL FPHHENEIAQS A YW+H+ V +N+KMSKSL NFFT R+I E
Sbjct: 222 HAGGMDLKFPHHENEIAQSEAVTGKPFAHYWIHSAFVNVDNKKMSKSLNNFFTAREILEE 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y ++R ++S HYR +N++ LDSA ++ + L +C L ++ K I+
Sbjct: 282 YDADSIRFLMLSGHYRIQINFTKELLDSAKSSI----ERLYNCINNLENLKDEVKKKAID 337
Query: 244 P---AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++K RD F +M DD NT+ ++ F D + IN++++
Sbjct: 338 EEELKYLKSLDKYRDRFIEKMDDDFNTADAISVLF-DLTRDINNNVD------------- 383
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I S ++ ++ E++R LG P G +LQ K L E ++ +LIE+R AR
Sbjct: 384 -INSSAELCDKANELIRELG-KPLG----ILQSHMKKDL------ETEIQELIEKRQQAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNKDF+ +D+IR DL + I L D + W+
Sbjct: 432 KNKDFALADKIRDDLKSRNIILEDTPQGVRWK 463
>gi|386333865|ref|YP_006030036.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
gi|334196315|gb|AEG69500.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum Po82]
Length = 465
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 222/395 (56%), Gaps = 52/395 (13%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR ++++ Q+ MI ++ N AY +GDV +AV + P YG+LSG+ LE+ RAGE
Sbjct: 110 PDHEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRRFPGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+H
Sbjct: 170 RVAANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQ+ A + V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y
Sbjct: 230 GGGADLQFPHHENEIAQAEGANGSTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD--CEVALSP--FQEHGKTA 240
P +R F++ +HYRS LNYS LD A A+ +Y L+D E P + HG+
Sbjct: 290 DPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEAGAQPDWSEPHGQ-- 347
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
F M+DD NT + F+ + S +N K + P
Sbjct: 348 ---------------RFREAMNDDFNTPVAMAVLFE-----LASEVN--KTRSP------ 379
Query: 301 LIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +++ + ++GLL P A+ + L AE+ IE R
Sbjct: 380 ------ALASQLAALGGVMGLLGRDPHAFLQGGVGAAADGLDTAEVEAR-----IEARRV 428
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
A+ +DF+++D IRADL GI L D G T WR
Sbjct: 429 AKAARDFARADGIRADLLAAGIVLEDKPGGVTEWR 463
>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
Length = 462
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/395 (41%), Positives = 213/395 (53%), Gaps = 42/395 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERA 357
+++ + +KE+ +LG VLQ D L+ D Q LI+ R
Sbjct: 372 DLDAAAGLAARLKELASVLG---------VLQMEADDFLQAGAEGRVDAAQVEALIQARL 422
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR NKD+++SD+IR LT G+ L D T WR
Sbjct: 423 AARTNKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|37999406|sp|Q88IU4.1|SYC_PSEPK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
Length = 460
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +R+E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLKA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDSKGTTTWR 457
>gi|423073155|ref|ZP_17061898.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
gi|361855985|gb|EHL07919.1| cysteine--tRNA ligase [Desulfitobacterium hafniense DP7]
Length = 477
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 217/393 (55%), Gaps = 23/393 (5%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L +P + P+ +DH+ ++ ++I + AY V+GDV+FAV+K P YG+LSG+ LE
Sbjct: 102 AALNLMPASIHPKATDHIPEMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ +AG RV V RK+NP DFALWK AK GEP W+SPWG GRPGWHIECSAMS YL S F
Sbjct: 162 DMQAGARVEVGERKQNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL+FPHHENEIAQ+ + YWMHN +T N +KMSKSLGNFFT+R+I
Sbjct: 222 DIHGGGGDLVFPHHENEIAQAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREI 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E + +R +L+ HYRSPL++ L A + + +++ + AL ++ A
Sbjct: 282 LEYFPGEVIRFYLLGTHYRSPLDFDDENLRMAQKGLERLQTSIRLADEALGRQGQNSADA 341
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ R EF M DD N++ F+ + ++N + P
Sbjct: 342 APEQKLRAAAEEARREFEEAMDDDFNSALAYASFFE-----LGKAINAHVQAYPYSS--- 393
Query: 301 LIESLRKIENEVKEVLRILG--LLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
E L K + E+ +LG L P +E Q D+ ++ L+E RA
Sbjct: 394 --EGLLKARATLWELADVLGFDLAKPANQAEAGNQKLDQVMEL----------LLEVRAI 441
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
ARK KD+ SD IR L GI L D + W
Sbjct: 442 ARKKKDWEMSDLIRDRLKDLGIVLEDTPQGARW 474
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6.1|SYC_DICNV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 217/395 (54%), Gaps = 49/395 (12%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L CLPP+ +P+ ++++ ++ MI ++I + AY+ + GDV+++V YG+L+ +RL
Sbjct: 103 AALGCLPPSIEPKATEYVAEMIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ RAGER+A++ K +P DF LWK AK GEPSW+SPWG GRPGWHIECS MS H L
Sbjct: 163 EDLRAGERIAINEAKNDPLDFVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG+DL FPHHE EIAQS C +V+YW+HNG + +NEKMSKSLGNFFT+R +
Sbjct: 223 FDIHGGGMDLKFPHHECEIAQSEPVCGGKHVNYWLHNGFINIDNEKMSKSLGNFFTVRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA----LSPFQEH 236
+ Y +R F++ +HYR P+NYS L+ A + +Y L+ L P+QE
Sbjct: 283 LKNYAGEVIRFFMLQSHYRGPVNYSDAALEEAKRGLQRLYTALETAPTTGGAILLPYQE- 341
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
F A M DD NT + F+ A ML K +
Sbjct: 342 -------------------RFVAAMDDDFNTPQAIAVLFELA--------KMLNKAAAAE 374
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+LR + LGLL G + QQ AL AE+ E I R
Sbjct: 375 AADIAF-TLRTLAAR-------LGLL-TGDAKTLFQQ--KGALSAAEIEAE-----IARR 418
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AA+ KD++ +D IR L+ GI L D T W
Sbjct: 419 QAAKAAKDYATADSIREKLSALGIELKDSATGTQW 453
>gi|448240905|ref|YP_007404958.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
gi|445211269|gb|AGE16939.1| cysteinyl-tRNA synthetase [Serratia marcescens WW4]
Length = 461
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ + +P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDADAAPAGGEAFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT + F + +N LK + + +
Sbjct: 342 ---------FREAMDDDFNTPEAYSALFD-----LAREVNRLKSED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q+ D + E LI++R AR KD+
Sbjct: 380 MAAELRKLAKVLGLLQQEPEQFLQGGAQVDDGEVAEIE-------ALIKQRNEARAAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMNIVLEDGPQGTTWR 459
>gi|423393457|ref|ZP_17370683.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
gi|423421744|ref|ZP_17398833.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401096863|gb|EJQ04900.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG3X2-1]
gi|401629564|gb|EJS47377.1| cysteinyl-tRNA synthetase [Bacillus cereus BAG1X1-3]
Length = 465
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 218/395 (55%), Gaps = 41/395 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++P DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYINIDNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H +
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKW 343
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
AE + K + F M DD NT++ +T + A Q
Sbjct: 344 ----LAE--MEKFQVAFEEAMDDDFNTANAITELYNVA---------------NHANQYL 382
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKD---KALKRAELTEEDVLQLIEERA 357
L E K+ GAY + L+ L D L + EL +E++ LI++R
Sbjct: 383 LEEHTSKV--------------VIGAYVKQLETLFDILGLELAQEELLDEEIEALIQKRI 428
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ SDQIR DL + I L D + T W+
Sbjct: 429 EARKNRDFALSDQIRDDLKDRNIILEDTAQGTRWK 463
>gi|386712445|ref|YP_006178767.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
gi|384072000|emb|CCG43490.1| cysteinyl-tRNA synthetase [Halobacillus halophilus DSM 2266]
Length = 466
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PRV+++M++I D + +I+ AY +GDV+F NYG+LS Q + R+G R+ V
Sbjct: 112 HPRVTENMDEIIDFVKGLIDKGYAYEAKGDVYFRTRSFDNYGKLSHQSVNELRSGARIEV 171
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+K +P DF LWK AK E SW+SPWG GRPGWHIECSAM+ YL DIH GG DL
Sbjct: 172 GDKKEDPLDFTLWKEAKPDEISWESPWGNGRPGWHIECSAMAKKYLGETIDIHAGGQDLT 231
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS A S YWMHNG++ NEKMSKSLGNF + +++ P +R
Sbjct: 232 FPHHENEIAQSEAHNDQSFARYWMHNGYINIENEKMSKSLGNFILAHDLVKKHDPQVIRF 291
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC-- 249
F++S YR P+N+S L A + I ++ +H K+A +N +
Sbjct: 292 FMLSVQYRHPINFSDELLKGAKSSFDRIRNAYENL--------KHRKSASMNLQNDSDRW 343
Query: 250 ---INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLR 306
I +++F M DD NT++ ++ F D K N L Q +Q S++E+
Sbjct: 344 IKEIEAHKEQFIQEMDDDFNTANAISVLF-DLTKSANLYL------QEEQTHTSVLETY- 395
Query: 307 KIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFS 366
EN +KE++ +LGL E+ Q AEL +E+V LIEER ARK+++F
Sbjct: 396 --ENTLKELMMVLGL-------EIETQ--------AELLDEEVDALIEERKQARKDRNFE 438
Query: 367 KSDQIRADLTRKGIALMDMGKETIWR 392
++DQIR +L + I L D + T W+
Sbjct: 439 RADQIRDELKDRNIILEDTSQGTRWK 464
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|385870832|gb|AFI89352.1| Cysteinyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 461
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 216/396 (54%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNIVHPDAEPRATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEITAVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ +++++ HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDLSVAA---HGG---- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M DD NT + F A +N L K + Q
Sbjct: 336 ------------DEFEARFREAMDDDFNTPEAYSVLFDMA-----REVNRL-KAEDVQAA 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L +LRK+ +LGLL P + + Q+ + +K E LI++R
Sbjct: 378 NQLASALRKLSG-------VLGLLEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD++ +DQ R L GI L D + TIWR
Sbjct: 424 KDARAAKDWALADQARDRLNEMGIVLEDGPQGTIWR 459
>gi|452747914|ref|ZP_21947703.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
gi|452008063|gb|EME00307.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri NF13]
Length = 461
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 210/390 (53%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 104 LNVLRPDIEPRATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIED 163
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G R+ VD K++P DF LWK AK GEPSWDSPWG GRPGWHIECS MS L FD
Sbjct: 164 LKIGARIEVDEAKQDPLDFVLWKGAKPGEPSWDSPWGAGRPGWHIECSVMSTCCLGETFD 223
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++ E
Sbjct: 224 IHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE 283
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ A
Sbjct: 284 KYHPEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEA------------- 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA D + F A M DD N+ F+ + +N L++
Sbjct: 331 QPAGGD---EFVARFAAAMDDDFNSPEACAVLFE-----MIREVNRLRESDLPAAAALAA 382
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E+ +VL +L L P L+ A + + TE V LI R AR
Sbjct: 383 RL-----KELADVLGVLQLEPE-------TFLQAGAAGKVDATE--VEALIAARLTARAE 428
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR LT G+ L D T WR
Sbjct: 429 KNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 221/391 (56%), Gaps = 35/391 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I MI +I+ AY GDV++ V K +YG+L+ + ++
Sbjct: 102 LGVLRPDAEPRATQHVDEIVTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDD 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV V+ K +P DF LWKAAK GE W SPWGPGRPGWHIECSAMS L FD
Sbjct: 162 MRAGARVDVEELKEDPLDFVLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFD 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA V+ WMH G V +EKMSKSLGNFFTIR++ E
Sbjct: 222 IHGGGPDLTFPHHENEIAQSEAATGKQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLE 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ P +R+ L+++HYRSP+NY+ L A ++ Y L VAL + G+ +
Sbjct: 282 HHDPEVVRYLLVASHYRSPINYAPDSLADARKSLERFYNALDG--VALEGVETPGE---V 336
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+P+ + F M DD NT+ ++ F + LN +K+ P+Q
Sbjct: 337 DPSFD-------RRFIEAMDDDFNTAGAISVLFD-----LARELNRARKEAPEQAP---- 380
Query: 303 ESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ E+K + +LGLL P + LK A L+E ++ I ERA A+
Sbjct: 381 ----ALAAELKRLGGVLGLLQQEPAVF------LKGGA-GELPLSEAEIEARISERAEAK 429
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+ +DF+++D IR +L GI L D + T W
Sbjct: 430 QARDFARADAIRDELAALGIVLKDSREGTSW 460
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 224/396 (56%), Gaps = 31/396 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLE 61
+L C P +P+ +D + Q++ +I + + + AY GDV++AVE YG+LS +RL
Sbjct: 110 NLGCERPNSEPKATDFIPQMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLA 169
Query: 62 NNRAG--ERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHY 116
+ +AG ERV V++ K+NP DF LWK+AK EPS W SPWG GRPGWHIECSAMS
Sbjct: 170 DMQAGASERVNVETDKKNPFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCC 229
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L FDIHGGG DL FPHHENEIAQS A + + WMH G + + EKMSKSLGNFFT
Sbjct: 230 LGDTFDIHGGGHDLQFPHHENEIAQSEGATGKTYANNWMHVGFINVDGEKMSKSLGNFFT 289
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
IR + ++HP +R F++S+HYRSP+N+S L A ++ +YQ L+ E P E
Sbjct: 290 IRDVMGQFHPETIRFFILSSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEI 349
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+T P F+ M DD N++ ++ F A + IN ++N+ + Q
Sbjct: 350 DETPFETP------------FNQAMCDDFNSAGAVSVLFSLARE-INKAVNLETVEGNAQ 396
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ L IL L P ++ LQ K + L++ ++ IE R
Sbjct: 397 ALALATLLKDL-----AQPLNILQLNP----TDFLQA---KVGETTGLSDSEIEAFIEAR 444
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A+ +KDF+K+DQIR+DL +GI L D T WR
Sbjct: 445 KQAKADKDFAKADQIRSDLKAQGIELEDGKNGTTWR 480
>gi|423614620|ref|ZP_17590477.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
gi|401237464|gb|EJR43916.1| cysteinyl-tRNA synthetase [Bacillus cereus VD107]
Length = 465
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 221/392 (56%), Gaps = 35/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV+++M+ I + I +++N AY EGDV+F ++ YG+LS Q + +
Sbjct: 104 LGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R G R+ V +K++ DFALWKAAK GE W+SPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 RHGARIEVGEKKQDILDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YWMHNG++ NNEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKTFARYWMHNGYININNEKMSKSLGNFILVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
Y P +R F++S HYR P+N+S L S ++ + I Y L+ + + +H
Sbjct: 284 YDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDH---- 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
N + K + F M DD NT++ +T + A N + L ++ +
Sbjct: 340 --NEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVA----NHANQYLLEEHTSK---V 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+IE+ K +++ + ILGL L + EL +E++ LI++R AR
Sbjct: 391 VIEAYVK---QLEILFDILGL----------------ELAQEELLDEEIEALIQKRIEAR 431
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+ SDQIR DL + I L D + T W+
Sbjct: 432 KNRDFALSDQIRDDLKERNIILEDTAQGTRWK 463
>gi|395495078|ref|ZP_10426657.1| cysteinyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
Length = 462
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 214/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
10507]
gi|225038413|gb|EEG48659.1| cysteine--tRNA ligase [Blautia hydrogenotrophica DSM 10507]
Length = 484
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 226/400 (56%), Gaps = 38/400 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
M + P T P ++ +E + +MI +I+ AY V +G V+F V+K YG+LS +
Sbjct: 113 MEGMNVRPATTHPLATEEIEGMVEMIQTLIDKGFAYPVADGTVYFRVKKFKEYGKLSHKN 172
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
L++ ++G R V+ + +K +P DF LWK K GEP+W SPW GRPGWHIECS MS Y
Sbjct: 173 LDDLQSGFRALQVSGEEQKEDPLDFVLWKPRKEGEPAWPSPWCEGRPGWHIECSVMSKKY 232
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIH GG DLIFPHHENEIAQS YWMHNG + +N+KMSKSLGNFFT
Sbjct: 233 LGEEIDIHAGGEDLIFPHHENEIAQSECCNGKVFARYWMHNGFLNIDNKKMSKSLGNFFT 292
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+R+I E+Y LR F+++AHYRSPLN+S ++++ +++ I + L +
Sbjct: 293 VREIAEQYDLQVLRFFMLNAHYRSPLNFSRDLMEASKNSLERILNGAE----RLRFLADG 348
Query: 237 GKTARINPAAEDCINKLR----DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKK 292
K I+P ++ +N+ + +F M DD NT+ L F+ +KF N+ +N K
Sbjct: 349 AKKIEISPQEQESLNEAKKIYVSKFEEAMDDDFNTADALAAVFE-LVKFANTQINEESSK 407
Query: 293 QPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQL 352
+ +++ K++ +LGL+ K E+ +ED+ +L
Sbjct: 408 GYVVEVYAIL----------KQLCDVLGLIIE---------------KEKEVLDEDIERL 442
Query: 353 IEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
I ER AARK K+F+K+D+IR LT GI L D + W+
Sbjct: 443 IAERQAARKMKNFAKADEIRDQLTNMGIILEDTREGVKWK 482
>gi|333925975|ref|YP_004499554.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333930928|ref|YP_004504506.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327799|ref|YP_006023969.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
gi|333472535|gb|AEF44245.1| cysteinyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333490035|gb|AEF49197.1| cysteinyl-tRNA synthetase [Serratia sp. AS12]
gi|333960132|gb|AEG26905.1| cysteinyl-tRNA synthetase [Serratia sp. AS13]
Length = 461
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 212/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALR------------GTDANAQPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F + +N LK + + +
Sbjct: 336 EAFEA---RFREAMDDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D AE+ E + LI++R ARK KD+
Sbjct: 380 LAAELRKLAKVLGLLQQEPEQFLQSGAQADD-----AEVAE--IEALIKQRNDARKAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMSIVLEDGPQGTTWR 459
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 224/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R A
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEA 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT+ GI L D T WR
Sbjct: 435 RTAKDWAAADAARNALTKMGIILEDGPNGTTWR 467
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 214/392 (54%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L L P +PRV+DHM ++ +MI ++I AYV E DV FAV+ YG+LSGQ LE
Sbjct: 103 LFMLRPDLEPRVTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
RAG RV V+ KRNP DF LWK AK EP W SPWG GRPGWHIECSAM+ +L FD
Sbjct: 163 LRAGSRVEVEESKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ WMH+G V + KMSKSL NFFTI+++ +
Sbjct: 223 IHGGGSDLAFPHHENEIAQSCCAHHGQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+ ++R+FLIS HYRS LNYS L A ++ +Y +++D ++
Sbjct: 283 FFDSESVRYFLISGHYRSQLNYSEDNLKQARASLERLYNSVRDLTF-----------SKD 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
P D N +F M DD NT L F A +N LK+ KQ LS
Sbjct: 332 TPL--DKTNLHYQQFIKAMDDDFNTPGALAVLFDLA-----KEINRLKQSNIKQASLS-- 382
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVL--QLIEERAAAR 360
+ + +LGL L Q ++ L+ E EE + LI++R AR
Sbjct: 383 ------AGLLVTLANVLGL---------LNQSAEQFLQGDEKNEEVAMIEALIKQRNDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+NKD++ +D R L I L D T WR
Sbjct: 428 QNKDWASADSARDKLAALKIVLEDGPGGTTWR 459
>gi|365175135|ref|ZP_09362573.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
gi|363614000|gb|EHL65505.1| cysteine-tRNA ligase [Synergistes sp. 3_1_syn1]
Length = 468
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 211/359 (58%), Gaps = 29/359 (8%)
Query: 35 AYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSW 94
AY V+GDV+F+V YG+LS Q ++ +G R+ VD RK+ P DFALWK+AK GEP+W
Sbjct: 135 AYEVDGDVYFSVASFSEYGKLSKQSVDELLSGARIDVDERKQQPLDFALWKSAKPGEPAW 194
Query: 95 DSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYW 154
DSPWGPGRPGWHIECSAMS YL DIHGGG DLIFPHHENEIAQS A V YW
Sbjct: 195 DSPWGPGRPGWHIECSAMSTKYLGKTIDIHGGGSDLIFPHHENEIAQSECANNAQFVKYW 254
Query: 155 MHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASD 214
+HN ++ + EKMSKSLGNF T+R ++++ +PL LR FL S HYRSPLN+S L+ A
Sbjct: 255 LHNAYLLIDKEKMSKSLGNFLTVRDVSQKVNPLVLRFFLASVHYRSPLNFSPEGLEQAKA 314
Query: 215 AVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGA 274
A+ + L +C + E+ + A + + F A M DD NT+ + G
Sbjct: 315 AL----ERLNNCYADMLFALENRAAGEADEALRAAVKGSEEGFTAAMDDDFNTAGAV-GC 369
Query: 275 FQDALKFINSSLNMLKKKQPKQQQLSLIESL-RKIENEVKEVLRILGLLPPGAYSEVLQQ 333
+ ++ +N +++ + ++ ++ L+ ++L K +N ILG L Y E
Sbjct: 370 IFEMVRAVN--VHLTEHQEIDKEALTEAKALFEKTDN-------ILGYL----YEE---- 412
Query: 334 LKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K A E ++ L+ ER ARK K+F +SD+IR L KG+ + D + W+
Sbjct: 413 ------KEAGDEESEIDALVAERTEARKAKNFKRSDEIRDLLAAKGVVIEDTPQGPRWK 465
>gi|409397649|ref|ZP_11248512.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
gi|409117783|gb|EKM94209.1| cysteinyl-tRNA ligase [Pseudomonas sp. Chol1]
Length = 461
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 210/392 (53%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 102 ARLNVLRPDIEPRATDHIAGMHAMIQTLIDKGFAYAPGNGDVYYRVGKFAGYGKLSRRKI 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G R+ VD K +P DF LWK AK GEPSW+SPWGPGRPGWHIECS MS L
Sbjct: 162 EDLKIGARIEVDEAKEDPLDFVLWKGAKPGEPSWESPWGPGRPGWHIECSVMSTCCLGET 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 222 FDIHGGGPDLVFPHHENEIAQSEAATGKLYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ A
Sbjct: 282 LEKYHPEVVRYLLVSSHYRSPINYSEDSLREAKGALERFYNGLKGLPEA----------- 330
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA + L + F A M DD N+ F+ + +N L+
Sbjct: 331 --APAGGEA---LVERFGAAMDDDFNSPEACAVLFE-----MIREVNRLRDSDLNAAAAL 380
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
E+ VL +L L P E Q A ++ +V LI R AAR
Sbjct: 381 AARL-----KELAGVLGVLQLDP-----EAFLQ----AGAAGKVDAAEVEALIGARLAAR 426
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR LT G+ L D T WR
Sbjct: 427 AEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
>gi|395449080|ref|YP_006389333.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
gi|388563077|gb|AFK72218.1| cysteinyl-tRNA synthetase [Pseudomonas putida ND6]
Length = 460
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 210/393 (53%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F + +N L+ P
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLFD-----LVREINRLRDSDP-------- 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDSKGTTTWR 457
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/389 (41%), Positives = 214/389 (55%), Gaps = 42/389 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I +++ ++I D AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIPEIIELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANAAPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + I +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------IAAANG 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAAARKNK 363
+ E++++ +LGL L+Q + L+ T+ D + LI++R AR +K
Sbjct: 380 LAAELRKLAHVLGL---------LEQDPELFLQSGAQTDGDEVAKIEALIKQRNDARSSK 430
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
D++ +D R L GI L D + T WR
Sbjct: 431 DWALADSARDQLNELGIVLEDGPQGTTWR 459
>gi|384136752|ref|YP_005519466.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290837|gb|AEJ44947.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 487
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 215/389 (55%), Gaps = 31/389 (7%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P T PRV++ +++I I +I+ AY G V+F P YG+LS Q E+ RAG
Sbjct: 121 PATVHPRVTECVDEIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGY 180
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ V K +P DFALWKAAK GE W SPWGPGRPGWHIECS M+ YL + DIH GG
Sbjct: 181 RIEVQDEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGG 240
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DLIFPHHENEIAQS A + YW+HNG + N EKMSKS GNF R + ER P
Sbjct: 241 RDLIFPHHENEIAQSEAHSGKTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERRDPR 300
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINP 244
A+R FL+SAHYR+PLNY+ LD A A+ I + ++D + AL Q A P
Sbjct: 301 AVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMQGALDRADEVP 360
Query: 245 AAEDC--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+A+ + ++R F M DD NT+ + F D ++ +N+ L K +
Sbjct: 361 SAQAHADVEQIRRAFIEAMDDDFNTADGMAAIF-DGVRLVNTRLEEGGVK---------L 410
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR + E+L +LG+ K E E+++ +LI ERA ARK
Sbjct: 411 GDLRLYRDLFVELLGVLGI----------------PKKEEERLEDEIERLIAERAEARKR 454
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
+DF+++D+IR L +GI L D T W
Sbjct: 455 RDFARADEIRDHLRHRGIVLEDTPYGTRW 483
>gi|444335137|ref|ZP_21150465.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443549406|gb|ELT58237.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 435
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 224/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 79 LNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 138
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 139 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 198
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 199 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 258
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 259 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 309
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 310 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTEDMAKAN---- 354
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R A
Sbjct: 355 ----GLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEA 400
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT+ GI L D T WR
Sbjct: 401 RTAKDWAAADAARNALTKMGIILEDGPNGTTWR 433
>gi|447917289|ref|YP_007397857.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
gi|445201152|gb|AGE26361.1| cysteinyl-tRNA ligase [Pseudomonas poae RE*1-1-14]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 210/392 (53%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKA K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ A++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-AVAPAGGETFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRETDLDAAAGL 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+KE+ +LG+L E L+ A R + E D LI+ R AAR
Sbjct: 380 --------AARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+++SD+IR LT G+ L D T WR
Sbjct: 426 AGKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|421521487|ref|ZP_15968142.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
gi|402754813|gb|EJX15292.1| cysteinyl-tRNA ligase [Pseudomonas putida LS46]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 214/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR +LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDELTAMGVVLEDSKGTTTWR 457
>gi|440737636|ref|ZP_20917198.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
gi|440381844|gb|ELQ18359.1| cysteinyl-tRNA ligase [Pseudomonas fluorescens BRIP34879]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 208/392 (53%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKA K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKATKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPA------------ 328
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ PA D F M+DD T F+ + +N L++
Sbjct: 329 -VAPAGGDTFVA---RFTEVMNDDFGTPEACAVLFE-----MVREINRLRETDLDAAAGL 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+KE+ +LG+L E L+ A R + E D LI+ R AAR
Sbjct: 380 --------AARLKELASVLGVLQ----MEADNFLQAGAEGRVDAAEVDA--LIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+++SD+IR LT G+ L D T WR
Sbjct: 426 AGKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|438003406|ref|YP_007273149.1| Cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|432180200|emb|CCP27173.1| Cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 419
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 221/384 (57%), Gaps = 32/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PR ++H+++I D+I ++ AY V GDV++ + +YG+LS Q ++ +AG R+
Sbjct: 63 HPRATEHIDEIIDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEP 122
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+K++P DFALWKA K GEP+WDSPWG GRPGWHIECS M+ YL DIHGGG DLI
Sbjct: 123 GEQKKDPIDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLI 182
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS AA ++MH G++ NN+KMSKSLGNFFT+R I + Y P LR
Sbjct: 183 FPHHENEIAQSEAATGKPFARFFMHVGYLNINNQKMSKSLGNFFTVRDILKTYDPEVLRF 242
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
F++S+HYR+P+N+S ++ A +++ + L + ++ + + + E +N
Sbjct: 243 FMLSSHYRNPINFSQDLMEQAKNSL----ERLHNAIYSMEHLESVAQDKDLAEDDEKYLN 298
Query: 252 KL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
KL ++EF M DD NT+ + F I NM + S +K+
Sbjct: 299 KLETNKNEFIKAMDDDFNTADAIASLFN-----IVREYNMFVDEN----------SPKKL 343
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ K+ + LG + G + + +++ L +E++ Q I ER ARK K+++ +
Sbjct: 344 IVDTKDAILTLGSV-LGLFRKFMEKT---------LLDEEIEQKIIEREQARKEKNYALA 393
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR DL +GI L D W+
Sbjct: 394 DKIRDDLKAQGIILEDTPAGVRWK 417
>gi|381163362|ref|ZP_09872592.1| cysteinyl-tRNA synthetase [Saccharomonospora azurea NA-128]
gi|379255267|gb|EHY89193.1| cysteinyl-tRNA synthetase [Saccharomonospora azurea NA-128]
Length = 459
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 222/391 (56%), Gaps = 38/391 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L CLPP+ PR + H+ Q+ ++I ++I++ AY GDV+F+V YG LSGQR+E
Sbjct: 102 AALGCLPPSATPRATGHITQMIELIQRLIDSGHAYAAGGDVYFSVASFDGYGALSGQRME 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ + GE A KR+ DF LWK +K GEPSW +PWGPGRPGWH+ECSAM+ YL S+F
Sbjct: 162 DVQQGESQA--EGKRDHRDFTLWKGSKPGEPSWPTPWGPGRPGWHLECSAMATAYLGSEF 219
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG+DL+FPHHENE AQS AA D YW+HN VT + EKMSKSLGN I ++
Sbjct: 220 DIHGGGVDLVFPHHENERAQSLAAG-DGFARYWLHNAWVTMSGEKMSKSLGNVVAIPEML 278
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
RY P+ LR +LI HYRS + YS L ++ I Q L+ R
Sbjct: 279 RRYRPVELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLR----------------R 322
Query: 242 INPAAEDC-INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ ++ D + ++ EF A + DDL T H + ++ N++L+ + L
Sbjct: 323 VRGSSGDVRVGRVPAEFAAALDDDLGTPHAFA-VLHNTVRDGNAALD----ASDGDKALE 377
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L E++R + + +LG+ P SE Q +D + A L+ V ++ +R AR
Sbjct: 378 LAETVRAMVD-------VLGIDP---LSE--QWAEDTGTEAAALSRL-VDAMLADRQQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
++DF+ +DQIR L GI++ D +W
Sbjct: 425 ADRDFALADQIRDRLAAAGISVEDTPNGPMW 455
>gi|410092099|ref|ZP_11288640.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
gi|409760592|gb|EKN45723.1| cysteinyl-tRNA ligase [Pseudomonas viridiflava UASWS0038]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 212/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K +P DF LWK K GEPSWDSPWGPGRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKDDPLDFVLWKGVKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + W+H G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWLHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L + A+ Y L+ V+ + G A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVS----EPVGGEA 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + F A M+DD T F+ + +N L++ P
Sbjct: 337 FV------------ERFTAAMNDDFGTPEACAVLFE-----MVREVNRLRETDPAAAAGL 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+K++ +LG+L E L+ A R + E V LI+ R AAR
Sbjct: 380 --------AARLKQLASVLGVLQ----LEADDFLRAGAEGRVDAAE--VEALIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+++SD+IR +T G+ L D T WR
Sbjct: 426 AAKDWAESDRIRDQITAMGVVLEDGKGGTTWR 457
>gi|254469086|ref|ZP_05082492.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
gi|207087896|gb|EDZ65179.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
Length = 453
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 229/391 (58%), Gaps = 44/391 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L +PPT+QP+ ++ + + MI+ +++ AY+ + GDVFF + K +YG+LS + +++
Sbjct: 103 LSVIPPTFQPKATEAIPSMIKMISILVDKGFAYIGKNGDVFFEIAKFKDYGKLSKKNVDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
AG RV +D K++ DF LWK +K EPSW SPWG GRPGWHIECSAMS+ L FD
Sbjct: 163 LDAGSRVKIDDNKKSFGDFVLWKLSKENEPSWQSPWGNGRPGWHIECSAMSSDILGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DLIFPHHENEIAQS + +YW+HNG V ++EKMSKSLGNFFT++ + +
Sbjct: 223 IHGGGQDLIFPHHENEIAQSESCHGHKMANYWIHNGFVNVDDEKMSKSLGNFFTLKNVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y +R F+ +HYRSPLNYS L+ A AV IY +AL P+ K ++
Sbjct: 283 KYSGEVVRFFVYKSHYRSPLNYSDQNLNDAKVAVEKIY-------IALRPY----KCIQV 331
Query: 243 N-PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+ ++ ++K++D + DD N+ A+ I +N L K
Sbjct: 332 DLDWSKASLSKIKDA----LDDDFNSPK--------AISIIFKLINQLNKG--------- 370
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
S + NE+ VL+ LGL+ + Q+ + K +++ + + +LI++RA A+
Sbjct: 371 --SNNDLANEIYSVLKALGLMA------IPQE--EFFTKSSKIDHDHIEKLIQQRAQAKL 420
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ K+D++R ++ G+ L D T+WR
Sbjct: 421 QKDYQKADELRNEIDSLGVVLEDTASGTVWR 451
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 228/389 (58%), Gaps = 47/389 (12%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P Y+PR ++++ ++ D+I ++ N AY +GDV +AV K P YG+LSG+ L++ RAGE
Sbjct: 108 PDYEPRATEYVPEMLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGE 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VDS K++P DF LWK AK GEP+W SPWG GRPGWHIECSAMS+ L FDIHGGG
Sbjct: 168 RVEVDSAKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQS A + V+YWMHNG V +NEKMSKSLGNFFTIR + E++
Sbjct: 228 QDLQFPHHENEIAQSEGANCCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLEQFDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R F++ AHYRSPLNYS LD A ++ +Y L+D + PAA
Sbjct: 288 VVRFFILRAHYRSPLNYSDAHLDDARRSLDSLYFALRD----------------VPPAAA 331
Query: 248 DC--INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
D N+ F A +++D ++ + F+ A + + K LS +
Sbjct: 332 DIDWSNEFAGRFAAALNEDFDSHGAIAVLFELAAEV----------NRQKSAGLSCL--- 378
Query: 306 RKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
+K + ++GLL P AY + L E V Q+I +RAAA+K K
Sbjct: 379 ------LKGLGGVIGLLEREPSAYLQ-------GGAGVGGLDEAAVGQMIVDRAAAKKAK 425
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
+F+++D+IR +L GI L D + T WR
Sbjct: 426 NFAEADRIRDELKAAGIILDDSPQGTTWR 454
>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|386085793|ref|YP_006001667.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
Length = 447
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 211/393 (53%), Gaps = 52/393 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P T PRV ++M++I ++ +I+ AYV EGDV+F V KS NY +L+ + LE
Sbjct: 101 AQLGIKPATQNPRVINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLE 160
Query: 62 NNRAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+ G D+ RK +P DFALWKAAK GE SW+SPWGPGRPGWHIECS M+ L
Sbjct: 161 DLEIGASGRTDAETDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILG 220
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+
Sbjct: 221 DTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVH 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + LR FL + YR P+N++ + + D EV L +
Sbjct: 281 DMLKTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHS 326
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ + D F A M DD NT++ +T F D K+INS
Sbjct: 327 LPLTEEVSQAELQAYLDAFQAAMDDDFNTANGVTVLF-DMAKWINSG------------- 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++N +++L++ G+ V ++ E +ED+ +LIEER A
Sbjct: 373 ----NYDETVKNAFEKILQVFGI--------VFEE---------ETLDEDIEKLIEERQA 411
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 412 ARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|398906751|ref|ZP_10653593.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM50]
gi|398172518|gb|EJM60379.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM50]
Length = 460
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 214/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ ++ MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMQSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK AK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKGAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGL-------------P 327
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ PA + + F M+DD T F+ + +N L++ S
Sbjct: 328 NVAPAGGEA---FVERFTQVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----LEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|418462040|ref|ZP_13033098.1| cysteinyl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
gi|359737788|gb|EHK86708.1| cysteinyl-tRNA synthetase [Saccharomonospora azurea SZMC 14600]
Length = 459
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 222/391 (56%), Gaps = 38/391 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L CLPP+ PR + H+ Q+ ++I ++I++ AY GDV+F+V YG LSGQR+E
Sbjct: 102 AALGCLPPSATPRATGHITQMIELIQRLIDSGHAYAAGGDVYFSVASFDGYGALSGQRME 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ + GE A KR+ DF LWK +K GEPSW +PWGPGRPGWH+ECSAM+ YL S+F
Sbjct: 162 DVQQGESQA--EGKRDHRDFTLWKGSKPGEPSWPTPWGPGRPGWHLECSAMATAYLGSEF 219
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG+DL+FPHHENE AQS AA D YW+HN VT + EKMSKSLGN I ++
Sbjct: 220 DIHGGGVDLVFPHHENERAQSLAAG-DGFARYWLHNAWVTMSGEKMSKSLGNVVAIPEML 278
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
RY P+ LR +LI HYRS + YS L ++ I Q L+ R
Sbjct: 279 RRYRPVELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLR----------------R 322
Query: 242 INPAAEDC-INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ ++ D + ++ EF A + DDL T H + ++ N++L+ + L
Sbjct: 323 VRGSSGDVRVGRVPAEFAAALDDDLGTPHAFA-VLHNTVRDGNAALD----ASDGDKALE 377
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L E++R + + +LG+ P SE Q +D + A L+ V ++ +R AR
Sbjct: 378 LAETVRAMVD-------VLGIDP---LSE--QWAEDTGTEAAALSRL-VDAMLADRQQAR 424
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
++DF+ +DQIR L GI++ D +W
Sbjct: 425 ADRDFALADQIRDRLAAAGISVEDTPNGPMW 455
>gi|383753596|ref|YP_005432499.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365648|dbj|BAL82476.1| putative cysteinyl-tRNA synthetase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 475
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 219/383 (57%), Gaps = 24/383 (6%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PRVS+ + I M+ ++++ AY V+ GDVF+ VEK YG+LSG++LE+ +AG R+ V
Sbjct: 112 PRVSETIPDIIAMVQKLVDKGYAYAVDNGDVFYRVEKFAGYGKLSGRKLEDMQAGARIDV 171
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
D RK +P DFALWKAAK GEPSWDSPWG GRPGWHIECS MS YL KFD HGGG DLI
Sbjct: 172 DERKEHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGEKFDFHGGGSDLI 231
Query: 132 FPHHENEIAQS--CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
FPHHENEIAQS C + S YW+HNG +T +NEKMSKS NFFT++ I Y +
Sbjct: 232 FPHHENEIAQSQACIGDEHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDILAEYPGEVV 291
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ HYRSPL++S +L A ++ + Q+ + L+ + GK+ A+
Sbjct: 292 RFFILQTHYRSPLDFSDERLKEAQTSLNRLAQSKGFMDELLA---KAGKSDTAKELADKA 348
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++ EFH M DD NT+ ++ F ++ +N+ + + E+ K+
Sbjct: 349 AGYVK-EFHEAMDDDFNTALAISQIFA-----LSKDINIYYQDVMNKGTAFDSENFAKVA 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
K + I+G+ ++ D L + +I R ARK K+++ +D
Sbjct: 403 EAYKLMTGIIGIFEQ-------EEAADDGLANKLMD-----LIINIRQDARKEKNWALAD 450
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR +L G+ L D + W+
Sbjct: 451 KIRDELKEAGVILEDTPQGVRWK 473
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43.1|SYC_ALISL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 225/399 (56%), Gaps = 44/399 (11%)
Query: 2 ADLQCLP---PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSG 57
AD L P +PR ++++ +I +++ ++I AYV GDV F V+K YGRLS
Sbjct: 98 ADFDALKMKRPDVEPRATEYITEIVELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSR 157
Query: 58 QRLENNRAGERVAVD--SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAH 115
Q LE +AG RV ++ S KR+ DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++
Sbjct: 158 QDLEQLQAGSRVTLEETSVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSS 217
Query: 116 YLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFF 175
L + FDIHGGG DL+FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFF
Sbjct: 218 ILGNHFDIHGGGSDLMFPHHENEIAQSCCAHDAKYVNTWMHSGMVMIDREKMSKSLGNFF 277
Query: 176 TIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQE 235
TIR + Y +R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ ++P
Sbjct: 278 TIRDVLAHYDSETVRYFLMSGHYRSQLNYSEENLNQARSSLERLYTSLRGLDLTVTP--- 334
Query: 236 HGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPK 295
E + + F M+DD NT + F+ A +N LK +
Sbjct: 335 --------AGGETFVTR----FSTAMNDDFNTPEAYSVLFEMA-----REVNRLKTEN-- 375
Query: 296 QQQLSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLI 353
IE+ K+ ++E+ +LGLL P A+ L+ + E+ E + LI
Sbjct: 376 ------IEAASKLGALMRELAEVLGLLSQEPEAF------LQGDSGSDNEVAE--IEALI 421
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ R AR KD+S +D R +T I L D + T WR
Sbjct: 422 KARNDARAAKDWSAADAARDAITALNIVLEDGPEGTTWR 460
>gi|218961048|ref|YP_001740823.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
gi|167729705|emb|CAO80617.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 469
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 209/384 (54%), Gaps = 26/384 (6%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
PPTYQP+ ++ M+ I I ++ AY VEGDV+FA E P+YG LSG++ E AG
Sbjct: 106 PPTYQPKATEVMDDIIAFIAELEKKGYAYEVEGDVYFATENLPSYGCLSGKKTEEQLAGA 165
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV + KR+PADF LWK K GEP W+SPWG GRPGWH EC MS YL FDIH GG
Sbjct: 166 RVMENYNKRHPADFTLWKKGKPGEPVWESPWGKGRPGWHTECVVMSQKYLGETFDIHCGG 225
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
IDLIFPHHENE+AQ+ A +YWMHNG + + EKMSKSL NFFT R I Y
Sbjct: 226 IDLIFPHHENELAQAMAYSGKPLANYWMHNGFLNVDGEKMSKSLKNFFTARDILAEYDAE 285
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
++R F +S HYRSP+++S ++ + AV +Y +L + P + + A+
Sbjct: 286 SIRFFFLSKHYRSPIDFSRELMEESQRAVANLYSSLAEINY---PENAENRRPTVCGTAQ 342
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ N L EF M DD NT+ ++ F+ K N+S M + + + L L
Sbjct: 343 ELQN-LEQEFILAMDDDFNTAKAISLLFELNRKVKNTSATMADRISAAIKMVELGSVL-- 399
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
G + + +LK K +L+++ + ++ R AR KD++
Sbjct: 400 -----------------GFFQNLEAKLKQKM---PDLSKDLICLILSYRKEARDKKDWAL 439
Query: 368 SDQIRADLTRKGIALMDMGKETIW 391
+D+IR DL + GI + D + W
Sbjct: 440 ADKIRNDLAQLGIEIKDTPEGVKW 463
>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
Length = 469
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 229/403 (56%), Gaps = 45/403 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQR 59
MAD+ P T P+ + ++ + DMI +I+ AY +G V+F V+K YG+LS +
Sbjct: 99 MADMNVKPATTAPQATQEIQGMIDMIQTLIDKGYAYPAADGTVYFRVKKFKEYGKLSHKN 158
Query: 60 LENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
L++ ++G R V+ + +K +P DF LWK K GEPSW SPW GRPGWHIECS MS Y
Sbjct: 159 LDDLQSGFRSLKVSGEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMSKKY 218
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIH GG DLIFPHHENEIAQS YWMHNG + +N KMSKSLGNF T
Sbjct: 219 LGEEIDIHAGGEDLIFPHHENEIAQSECCNGKIFARYWMHNGFLNIDNRKMSKSLGNFRT 278
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
+RQI E+Y LR F+++AHYRSPLN+S +++A +++ + + + LS +++
Sbjct: 279 VRQIGEQYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNSL----ERILEAAGKLSDRKDN 334
Query: 237 GKTARIN-------PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 289
G I AE + K F A M DD NT+ L F+ +KF N++++
Sbjct: 335 GAAENITEEELALLKEAEGFVAK----FEAAMDDDFNTADALAAIFE-LVKFANTNVD-- 387
Query: 290 KKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDV 349
+ ++ L E L K+ + +LGL K K+ E+ ++++
Sbjct: 388 -ENSSREFAGGLYEELFKLSD-------VLGL---------------KIEKKEEILDKEI 424
Query: 350 LQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
LI+ER AARK KDF ++D+IR +L +KGI L D + W+
Sbjct: 425 EDLIQERQAARKAKDFQRADEIRDELLKKGIILKDTREGVKWQ 467
>gi|421080284|ref|ZP_15541218.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401705137|gb|EJS95326.1| Cysteine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 461
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 215/396 (54%), Gaps = 46/396 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L + P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNIVRPDAEPRATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEITAVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSRCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A ++ +Y L+ ++ ++ HG
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARASLERLYIALRGTDLNVAA---HGG---- 335
Query: 243 NPAAEDCINKLRDEFHAR----MSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
DEF AR M DD NT + F A +N LK + Q
Sbjct: 336 ------------DEFEARFREAMDDDFNTPEAYSVLFDMA-----REVNRLKAEDV-QAA 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L +LRK+ +LGLL P + + Q+ + +K E LI++R
Sbjct: 378 NQLASALRKLSG-------VLGLLEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR KD++ +DQ R L GI L D + TIWR
Sbjct: 424 KDARAAKDWALADQARDRLNEMGIVLEDGSQGTIWR 459
>gi|340758451|ref|ZP_08695038.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251836766|gb|EES65300.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 473
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 223/381 (58%), Gaps = 22/381 (5%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPN-YGRLSGQRLENNRAGERVA 70
+P+ ++H+ + ++I +I AY EGDV+F VEK + YG LS Q +E+ ++G R+
Sbjct: 112 RPKATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVEDLKSGARIE 171
Query: 71 VDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDL 130
V K++P DFALWKAAK GEPSWDSPWG GRPGWHIECSAMS YL FDIHGGG DL
Sbjct: 172 VADIKKSPVDFALWKAAKEGEPSWDSPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDL 231
Query: 131 IFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALR 190
IFPHHENEIAQS +C YWMHNG++ N EKMSKS G F +RQ+ E++ +R
Sbjct: 232 IFPHHENEIAQSKCSCGGEFARYWMHNGYININGEKMSKS-GTFMLLRQVLEQFEGRVIR 290
Query: 191 HFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCI 250
F++ AHYR P+++S +L+ A ++ I L + AL+ + G A AE +
Sbjct: 291 LFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEG-GADCAELAE-VL 348
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
++F M DD NT+ L GA + +K +N +L K + + ++ E++ + N
Sbjct: 349 KSSSEKFVTAMDDDFNTAQGL-GAIFELIKELNKALE--GDKLSAKGKETVKETVDYVVN 405
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
++EVL ++ L +EV LT E V ++E R AR +K+++ SD+
Sbjct: 406 IMQEVLGVILKLD----NEV-----------GNLTSELVEFILEMRREARADKNWAMSDK 450
Query: 371 IRADLTRKGIALMDMGKETIW 391
IR L GI + D T W
Sbjct: 451 IRDRLAEMGIKIKDGKDTTTW 471
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 221/387 (57%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I AYV GDV F V+K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATEFITEIVELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VDS KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ +V +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + + F M+DD NT + F+ A +N +K + +E
Sbjct: 337 EYVTR----FSTAMNDDFNTPEAYSVLFEMA-----REINRIKTES--------VEKASA 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ I+G+L P A+ + D A E+ E + LI+ R +R +KD+
Sbjct: 380 LGALMRELADIIGILHQDPEAFLQ-----GDAAGNDDEVAE--IEALIKLRNDSRASKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ANADLARDKLNELGIVLEDGPEGTTWR 459
>gi|422013258|ref|ZP_16359886.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414103466|gb|EKT65041.1| cysteinyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 462
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 225/395 (56%), Gaps = 43/395 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +IN AYV E GDV F V+ +YG+LS Q LE
Sbjct: 103 LNILRPNSEPRATQHIIEIIEITELLINRGHAYVAENGDVMFEVKTDEDYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y L+ G +
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALR------------GTDKNV 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + + F M+DD NT + F D ++ IN + K + ++
Sbjct: 331 APAGGEI---FKARFEEAMNDDFNTPEAYSALF-DMVREIN---------RLKSEDMAAA 377
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERA 357
++ +E++ + +LGLL P A+ + Q +D +E+V + LI++R
Sbjct: 378 NAM---ASELRRLAGVLGLLEQDPEAFLQGSAQGED---------DEEVAKIEALIKQRN 425
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K+++ +D R +LT GI L D + TIWR
Sbjct: 426 DARKTKEWALADAARDELTSMGIVLEDGAQGTIWR 460
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 222/382 (58%), Gaps = 17/382 (4%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM +I MI +++ AYVVE DV+++VEK +YG+LSG+ L++ +AG R+ VD
Sbjct: 114 PRVSEHMPEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+RK +P DFALWK AK GEPSW+SPWG GRPGWHIECSAMS YL FD HGGG DLIF
Sbjct: 174 TRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A S V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R
Sbjct: 234 PHHENEIAQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRF 293
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCI 250
FLIS HYRSPL+++ +L+ + ++ + ++ + E+A P G + A
Sbjct: 294 FLISNHYRSPLDFTDARLEEMTRSLERLRTSIMNVLELATMP---AGGKSAEAAALLTEA 350
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
++ ++F M DD NT+ F+ A K ++ P S+I +++I
Sbjct: 351 QQVAEDFETAMCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDT--SVITEVKRIFK 408
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
+ ++L IL G S A + A L E ++E R R+ K + +D
Sbjct: 409 MMTDILGILESAWNGQTSSA------DASEYAALVE----AVLEIRKECREKKQYELADA 458
Query: 371 IRADLTRKGIALMDMGKETIWR 392
IR L GI + D + W+
Sbjct: 459 IRDKLQALGITIEDSPQGARWK 480
>gi|397687288|ref|YP_006524607.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
gi|395808844|gb|AFN78249.1| cysteinyl-tRNA ligase [Pseudomonas stutzeri DSM 10701]
Length = 460
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/395 (41%), Positives = 213/395 (53%), Gaps = 42/395 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H++ + MI +I+ AY GDV++ V K YG+LS +R+
Sbjct: 101 ARLNVLRPDVEPRATQHIDGMFAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRRRI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G R+ VD K +P DF LWKAAK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLKIGARIEVDEAKEDPLDFVLWKAAKPGEPSWQSPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 221 FDIHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKT 239
E+Y P +R+ L+S+HYRSP+NYS L A A+ Y L+ EVA +
Sbjct: 281 LEKYQPEVVRYLLVSSHYRSPINYSEDSLKEAKGALERFYTALRGLPEVAAA-------- 332
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
E+ + + F A M DD N+ F A +N L+ P+
Sbjct: 333 -----GGENFVER----FGAAMDDDFNSPEACAVLFDMA-----REINRLRDADPQAAAA 378
Query: 300 SLIESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+KE+ +LG+L P + LQ + + AE V LI R
Sbjct: 379 L--------AARLKELGNLLGVLQMNPDVF---LQAGAEGKVDAAE-----VEALIAARL 422
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR LT G+ L D T WR
Sbjct: 423 QARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 466
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 221/384 (57%), Gaps = 32/384 (8%)
Query: 12 QPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PR ++H+++I D+I ++ AY V GDV++ + +YG+LS Q ++ +AG R+
Sbjct: 110 HPRATEHIDEIIDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEP 169
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
+K++P DFALWKA K GEP+WDSPWG GRPGWHIECS M+ YL DIHGGG DLI
Sbjct: 170 GEQKKDPIDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLI 229
Query: 132 FPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
FPHHENEIAQS AA ++MH G++ NN+KMSKSLGNFFT+R I + Y P LR
Sbjct: 230 FPHHENEIAQSEAATGKPFARFFMHVGYLNINNQKMSKSLGNFFTVRDILKTYDPEVLRF 289
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDCIN 251
F++S+HYR+P+N+S ++ A +++ + L + ++ + + + E +N
Sbjct: 290 FMLSSHYRNPINFSQDLMEQAKNSL----ERLHNAIYSMEHLESVAQDKDLAEDDEKYLN 345
Query: 252 KL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
KL ++EF M DD NT+ + F I NM + S +K+
Sbjct: 346 KLETNKNEFIKAMDDDFNTADAIASLFN-----IVREYNMFVDEN----------SPKKL 390
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
+ K+ + LG + G + + +++ L +E++ Q I ER ARK K+++ +
Sbjct: 391 IVDTKDAILTLGSV-LGLFRKFMEKT---------LLDEEIEQKIIEREQARKEKNYALA 440
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D+IR DL +GI L D W+
Sbjct: 441 DKIRDDLKAQGIILEDTPAGVRWK 464
>gi|388569689|ref|ZP_10156078.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
gi|388263112|gb|EIK88713.1| cysteinyl-tRNA synthetase [Hydrogenophaga sp. PBC]
Length = 477
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 217/391 (55%), Gaps = 50/391 (12%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
PT+ PR +D++ Q+ D++ ++ + AY +GDV +AV + P YG+LSG+ L+ AGE
Sbjct: 126 PTHDPRATDYVPQMLDIVRRLEERNLAYRSGDGDVNYAVRRFPGYGKLSGKTLDELNAGE 185
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVAV K +P DF LWKAAK EP+ WDSP+G GRPGWHIECSAMS L FDIH
Sbjct: 186 RVAVAQGKDDPLDFVLWKAAKPEEPADAQWDSPYGRGRPGWHIECSAMSCALLGETFDIH 245
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A WMHNG V +NEKMSKSLGNFFTIR++ +RY
Sbjct: 246 GGGADLQFPHHENEIAQSEGANGVPLAKVWMHNGFVNVDNEKMSKSLGNFFTIREVLQRY 305
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F++ AHYRSPLN+S LD A A+ +Y L + A
Sbjct: 306 DAETVRFFMLRAHYRSPLNHSDAHLDDARAALKRLYTALSAVKAA--------------D 351
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A D + F A M DD NT L+ F + S +N + K P+Q L
Sbjct: 352 VAMDWADPFAARFKAAMDDDFNTPVALSVLFD-----LASEIN--RGKDPRQAGL----- 399
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE----ERAAAR 360
LR + +LGL LQ K L+ ++E V +IE +RA+A+
Sbjct: 400 LRALGG-------VLGL---------LQADPVKYLQGGGASDELVGAVIEAKIADRASAK 443
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+DF+++D+IR +L GI L D T W
Sbjct: 444 LARDFAEADRIRKELLDAGIVLKDSAAGTTW 474
>gi|392373606|ref|YP_003205439.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Candidatus Methylomirabilis oxyfera]
Length = 530
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 224/427 (52%), Gaps = 37/427 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L PT +PR + H+ ++ ++I ++ AY V+GDV+F V +S +YG+LS + L
Sbjct: 101 MDALGLRTPTEEPRATRHIREMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +AG RV VD RKR+P DFALWKA++ GEP+W+SPWGPGRPGWHIECSAMS YL
Sbjct: 161 DELQAGARVEVDPRKRDPLDFALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQS A YW+HNG V EKMSKSLGN TIR++
Sbjct: 221 FDIHGGGADLIFPHHENEIAQSECATGKPFARYWIHNGFVNIRAEKMSKSLGNILTIREL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
R P A + FL+ HYR+P+ +S L SA+ A + L++ + +
Sbjct: 281 LGRISPCAFKLFLLGTHYRAPVEFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRS 340
Query: 241 RINP-AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
R++ I + E+ M DD NT L F + +N+ + +
Sbjct: 341 RMDSLPLSGQIREAEQEYTDAMDDDFNTPRALAALFN-----LTKGVNVALRDVDGAPEP 395
Query: 300 SLI-------ESLRKIENEV-------KEVLRILGLLP------PGAYSEVLQQLKDKAL 339
SL+ E+LR + + + +EV+ L + P G + VL+ D
Sbjct: 396 SLVYGLSMAGETLRTLGSVLGGLFEGPREVVDRLIMTPSAGTSTSGTAASVLRITGDDYC 455
Query: 340 KRAELTE-----------EDVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKE 388
K E E E + ++ RA R KD++ +D IR LT G+ + D G
Sbjct: 456 KAREAVESAMASGHTPPTEAIRTIVAYRALCRDRKDWTTADAIRTWLTNLGVVVDDTGDG 515
Query: 389 TIWRPCV 395
W V
Sbjct: 516 VRWYVAV 522
>gi|397697053|ref|YP_006534936.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
gi|397333783|gb|AFO50142.1| Cysteinyl-tRNA synthetase [Pseudomonas putida DOT-T1E]
Length = 460
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LSILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDSKGTTTWR 457
>gi|407892682|ref|ZP_11151712.1| cysteinyl-tRNA ligase [Diplorickettsia massiliensis 20B]
Length = 470
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 216/394 (54%), Gaps = 29/394 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQR 59
A L +PPT +P+ ++ + +I +I +++ AY E D+F+A++ YG L+ Q
Sbjct: 100 FAQLNLMPPTQEPKATESIAEIIQLIQILLDKGVAYQAENRDIFYAIDTFKTYGALAHQD 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
LE R G RVAV+ K++P DF LWKAAK EPSW+SPWGPGRPGWHIECSAMS L
Sbjct: 160 LEKLRHGSRVAVELNKQDPLDFVLWKAAKPNEPSWESPWGPGRPGWHIECSAMSMAALGE 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
+FDIHGGG+DL+FPHH+NEIAQS AA V W+H G V N +KMSKSLGNFFT+R
Sbjct: 220 QFDIHGGGLDLVFPHHQNEIAQSEAATDKKFVQTWIHVGFVQVNRQKMSKSLGNFFTLRD 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ Y +R+FL+++HYRSP++YS L A A+ +Y TL + + G
Sbjct: 280 MLAEYPAEVVRYFLMASHYRSPIHYSQENLQLAQAALQRLYTTLFEVD----NLGASGHP 335
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
+ ++ + F A M DD NT L F + ++ +K P + L
Sbjct: 336 EINQDSLTTLLSSYEESFQAAMDDDFNTPEALAVLF-----VMTHEIHRIKATDPNKAIL 390
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA--ELTEEDVLQLIEERA 357
I +K+ +LG +LQQ LK ++ + LI+ R
Sbjct: 391 --------IAQVLKKQATVLG---------ILQQNPKDFLKSGVQQIDSAKIESLIQARE 433
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR KD+ +D IR +L + GIAL D + + W
Sbjct: 434 KARAGKDWKTADAIRQELEQMGIALKDTPQGSDW 467
>gi|335049775|ref|ZP_08542761.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333762270|gb|EGL39774.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 481
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 222/382 (58%), Gaps = 17/382 (4%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM +I MI +++ AYVVE DV+++VEK +YG+LSG+ L++ +AG R+ VD
Sbjct: 114 PRVSEHMPEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
+RK +P DFALWK AK GEPSW+SPWG GRPGWHIECSAMS YL FD HGGG DLIF
Sbjct: 174 TRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAACQDS-NVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQS A S V YW+HNG +T N+EKMSKSL NFF ++ + Y P A+R
Sbjct: 234 PHHENEIAQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAYYDPDAVRF 293
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDC-EVALSPFQEHGKTARINPAAEDCI 250
FLIS HYRSPL+++ +L+ + ++ + ++ + E+A P G + A
Sbjct: 294 FLISNHYRSPLDFTDARLEEMTRSLERLRTSIMNVLELATMP---AGGKSAEAAALLTEA 350
Query: 251 NKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIEN 310
++ ++F M DD NT+ F+ A K ++ P S+I +++I
Sbjct: 351 QQVAEDFETAMCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDT--SVITEVKRIFK 408
Query: 311 EVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSDQ 370
+ ++L IL G S A + A L E ++E R R+ K + +D
Sbjct: 409 MMTDILGILESAWNGQTSSA------DASEYAALVE----AVLEIRKECREKKQYELADA 458
Query: 371 IRADLTRKGIALMDMGKETIWR 392
IR L GI + D + W+
Sbjct: 459 IRDKLQALGITIEDSPQGARWK 480
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 221/387 (57%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I AYV GDV F V+K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +DS KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDIDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ +V +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + + F M+DD NT + F+ A +N +K + IE
Sbjct: 337 EYVTR----FSTAMNDDFNTPEAYSVLFEMA-----REINRIKTES--------IEKASA 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ I+G+L P A+ + D A E+ E + LI+ R +R +KD+
Sbjct: 380 LGALMRELADIIGILHQDPEAFLQ-----GDAAGNDDEVAE--IEGLIKLRNDSRASKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ANADLARDKLNELGIVLEDGPEGTTWR 459
>gi|452944310|ref|YP_007500475.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
gi|452882728|gb|AGG15432.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. HO]
Length = 488
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 221/395 (55%), Gaps = 12/395 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P +PRV++HME+I +I+++I AY +GDV+F+++ YG+LS +
Sbjct: 101 MEAINVKPANVEPRVTEHMEEIISLISKLIELGKAYESDGDVYFSIDSFKEYGKLSKRSP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG R+ +KRNP DFALWKA+K+ EP W+SPW GRPGWH EC AM +L
Sbjct: 161 EELEAGARIEPSLKKRNPLDFALWKASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GGIDL+FPHHENEIAQ+ + YWMHNG VT +KMSKSLGNF T+++I
Sbjct: 221 IDIHAGGIDLVFPHHENEIAQAESITGKPFARYWMHNGLVTVGGKKMSKSLGNFITLKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YHP LR ++ HYRSPL++S +++ A + ++D E L + GK
Sbjct: 281 YTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETKKAYERLKSAIEDIE-PLKAIAKEGKPV 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ +++F+ +S+D NTS + F + LN K + K ++
Sbjct: 340 -VDIDFYSLEKSTQEQFYKALSEDFNTSLAMAQVFNAV-----AELNRAKTESFKIGYIT 393
Query: 301 --LIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+E + N +K+ L+ I GLL L+ L+ + ++ E + LI+ R
Sbjct: 394 PKELEGYLFLANSLKQTLKDIFGLLEENTLQNTLKTLEPAS--SVNISTEFLEILIKARN 451
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A++NKDF +D IR +L GI L D TIW+
Sbjct: 452 LAKENKDFKVADFIRDELLNYGIKLEDTKAGTIWK 486
>gi|386012371|ref|YP_005930648.1| protein CysS [Pseudomonas putida BIRD-1]
gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
Length = 460
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDSKGTTTWR 457
>gi|374578926|ref|ZP_09652020.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
gi|374415008|gb|EHQ87443.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
Length = 452
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 225/390 (57%), Gaps = 20/390 (5%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L LP T P+ ++H+ ++ ++I +I++ Y VEGDV+FAV++ P+YG+LSG+ LE+
Sbjct: 79 LNLLPATIHPKATEHIPEMIEIIQGLIDSGLGYEVEGDVYFAVDRFPDYGKLSGRTLEDM 138
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG RV VD RKR+P DFALWK AK GEP+W SPWG GRPGWHIEC+AMS YL + FDI
Sbjct: 139 KAGARVEVDERKRHPMDFALWKKAKPGEPAWQSPWGEGRPGWHIECTAMSLKYLGAGFDI 198
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVS-YWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
HGGG DL FPHHENEIAQ+ + + YWMHN +T N EKMSKSLGNFFTIR++
Sbjct: 199 HGGGEDLAFPHHENEIAQTEGYLKGRTFAHYWMHNAFLTINQEKMSKSLGNFFTIRELLV 258
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+R +L+ HYRSPL+++ L A + + +++ + AL E + +
Sbjct: 259 NSPGEVIRFYLLGTHYRSPLDFNDQNLIMAQKGLERLQTSVRLAQEALER-SESSQNGQR 317
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ R+ F M DD N++ F+ + ++N ++ P + L
Sbjct: 318 GTELFKASKEAREAFERAMDDDFNSALAYAALFE-----LAKTMNGYVQENPLSSE-GLA 371
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
E+ R + E+ +VL L P + E D+ L + E VLQ+ R+ +R+
Sbjct: 372 EAQRTL-VELGDVLGFDLLHPAQVHVE-----NDEILNQ---VMEVVLQI---RSKSRQK 419
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD+ +D IR L KGI + D + W+
Sbjct: 420 KDWEMADFIRDMLKEKGIIIEDTPQGARWQ 449
>gi|395794944|ref|ZP_10474258.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
gi|395340887|gb|EJF72714.1| cysteinyl-tRNA ligase [Pseudomonas sp. Ag1]
Length = 462
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 214/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ +++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-SVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----MEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [[Clostridium] sticklandii]
Length = 466
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 217/391 (55%), Gaps = 39/391 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++E I I +I+ AY + GDV+F + YG+LS Q LE G R+
Sbjct: 108 TVHPRVTENIENIITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARI 167
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K++P DFALWKA K GE W SPWG GRPGWHIECS MSA YL DIH GG D
Sbjct: 168 DVNDEKKHPIDFALWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQD 227
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A YWMHNG++ +N+KMSKSLGNFFT+R I + +
Sbjct: 228 LIFPHHENEIAQSEARSGKQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVI 287
Query: 190 RHFLISAHYRSPLNYS---VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 246
R FL+SAHYR+P+N+S +LQ + + L + + L H K ++N +
Sbjct: 288 RFFLLSAHYRNPVNFSKELILQAKAG-------MERLANSKERLVFTISHAK-GQMNESE 339
Query: 247 EDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+ ++ L RD F M DD+NT+ ++ F+ A +F N+++ + ++ LSL
Sbjct: 340 LELVSALENHRDRFIEAMDDDINTADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLF- 397
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
NE+ VL I+ KA E + +LI++R A+KNK
Sbjct: 398 ------NELTGVLNII-----------------KAEDTDSNDNEQIEKLIKDRVEAKKNK 434
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
DF+ +D IR +L GI + D + T W+
Sbjct: 435 DFALADAIRDELKSMGIEIEDTRQGTKWKKV 465
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 103 LNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 283 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 333
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 334 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTEDMAKAN---- 378
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E +V + LI++R A
Sbjct: 379 ----GLAARLRELAAILGLL----------QLDPEQFLQAGSDEGEVAKIEALIKQRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT+ GI L D T WR
Sbjct: 425 RTAKDWAAADAARNALTKMGIILEDGPNGTTWR 457
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2.1|SYC_PECCP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 209/392 (53%), Gaps = 38/392 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ I +M+ +I AYV GDV F+V+ +P YG LS Q L+
Sbjct: 103 LNILRPDAEPRATHHITDIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ L FD
Sbjct: 163 LQAGARVEITEVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFT+R +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P +R+FL+S HYRS LNYS L A A+ +Y L+ +
Sbjct: 283 YYDPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYTALRGTD--------------- 327
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AA ++ F M DD NT + F A +N LK + Q L
Sbjct: 328 PDAAAQGGDEFEGRFREAMDDDFNTPEAYSVLFDMA-----REVNRLKTEDA-QAANQLA 381
Query: 303 ESLRKIENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+LRK+ +LGLL P + + Q+ + +K E LI++R AR
Sbjct: 382 SALRKLSG-------VLGLLEQDPEQFLQNGAQVDNDEVKEIE-------ALIQQRKDAR 427
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +DQ R L GI L D + TIWR
Sbjct: 428 AAKDWALADQARDRLNEMGIVLEDGPQGTIWR 459
>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 447
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 103 LGIKPATQNPRVINYMDEIITFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 162
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 163 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 223 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 283 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 328
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 329 LTEQVNQAE---LQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 373 -----NYDQTVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 410
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 411 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|410690165|ref|YP_006963884.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
gi|389597466|gb|AFK90217.1| Cysteinyl-tRNA synthetase [Salmonella sp. 40]
Length = 463
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 213/394 (54%), Gaps = 40/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AY+ E GDV F+V P+YG+LS Q LE
Sbjct: 103 LNILRPELEPRATHHISEIINITETLIRRGHAYIAENGDVMFSVSTDPDYGKLSRQDLEQ 162
Query: 63 NRAGERVAVD--SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++G+RV D KRN DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L
Sbjct: 163 LQSGDRVRTDVVDVKRNSMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSLGNFFT+R +
Sbjct: 223 FDIHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y +R+FL+S HYRS LNYS L A A+ +Y +L+ + +++P A
Sbjct: 283 LKYYDAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEA 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R A M DD NT + F A +N LK +
Sbjct: 343 RFIEA---------------MDDDFNTPEAYSVLFDMA-----REVNRLKSVDMAEAN-G 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ LRK+ +LGLL P A+ + + D + EL LI++R
Sbjct: 382 MASHLRKLSG-------VLGLLEQEPEAFLQSGVKTGDAEVAEIEL-------LIQQRLD 427
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K++S +D R L GI L D + T WR
Sbjct: 428 ARKAKNWSAADSARDRLNEMGIVLEDGPQGTTWR 461
>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|417907416|ref|ZP_12551189.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|341596309|gb|EGS38925.1| cysteine--tRNA ligase [Staphylococcus capitis VCU116]
Length = 466
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 217/384 (56%), Gaps = 33/384 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PRV +HM++I D I ++++ AY +GDV+F + YG+LS Q L++
Sbjct: 103 LNVKKATSNPRVMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDL 162
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ +K + DF LWK AK GE SWDSP+G GRPGWHIECS M+ H L + DI
Sbjct: 163 KVGARIEAGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDI 222
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A +YWMHNG + +NEKMSKSLGNF + I +
Sbjct: 223 HAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKE 282
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
P LR F+IS HYRSP+NY++ + +A + I Y+ +++ E + +EH +
Sbjct: 283 IDPDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYI 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
D I + +F A M DD NT++ +T A+ D K N K + S
Sbjct: 343 -------DQIETILRQFEAVMDDDFNTANAVT-AWYDLAKLAN--------KYVLENTTS 386
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
K+ + KEV +I +S+VL + K EL +ED+ +LIEER AR
Sbjct: 387 T-----KVLHRFKEVYQI--------FSDVL-GVPLKGKNENELLDEDIEKLIEERNEAR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMD 384
KNKDF+++D+IR L + I L D
Sbjct: 433 KNKDFARADEIRDMLKERNIILED 456
>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
Length = 466
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 217/384 (56%), Gaps = 33/384 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PRV +HM++I D I ++++ AY +GDV+F + YG+LS Q L++
Sbjct: 103 LNVKKATSNPRVMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDL 162
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ +K + DF LWK AK GE SWDSP+G GRPGWHIECS M+ H L + DI
Sbjct: 163 KVGARIEAGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDI 222
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A +YWMHNG + +NEKMSKSLGNF + I +
Sbjct: 223 HAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKE 282
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
P LR F+IS HYRSP+NY++ + +A + I Y+ +++ E + +EH +
Sbjct: 283 IDPDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYI 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
D I + +F A M DD NT++ +T A+ D K N K + S
Sbjct: 343 -------DQIETILRQFEAVMDDDFNTANAVT-AWYDLAKLAN--------KYVLENTTS 386
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
K+ + KEV +I +S+VL + K EL +ED+ +LIEER AR
Sbjct: 387 T-----KVLHRFKEVYQI--------FSDVL-GVPLKGENENELLDEDIEKLIEERNEAR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMD 384
KNKDF+++D+IR L + I L D
Sbjct: 433 KNKDFARADEIRDMLKERNIILED 456
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E +V + LI++R A
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEGEVAKIEALIKQRNEA 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT+ GI L D T WR
Sbjct: 435 RTAKDWAAADAARNALTKMGIILEDGPNGTTWR 467
>gi|414070586|ref|ZP_11406569.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
gi|410807040|gb|EKS13023.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. Bsw20308]
Length = 459
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 212/393 (53%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM++I M+ ++I AYV +GDV F V YG LS Q L
Sbjct: 103 LNMLRPDIEPTVTSHMDEIIVMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV V K +P DF LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQSGSRVEVAQDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSL NFFT+R++ +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FLIS HYRS LNYS LD A ++ IY L+D E +
Sbjct: 283 AYDAESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVEPVECDLEG------- 335
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
N+ +F M DD NT L F+ + LN +K+ Q QL+
Sbjct: 336 --------NEFVAKFRKAMDDDFNTPEALPVLFE-----LAKELNRVKESDVVQAGQLAF 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I LR I N +LG V QQ + L+ + E + LI +R A
Sbjct: 383 I--LRSIGN-------VLG---------VAQQAPEAFLQGGQDDGEVATIEALIVKRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +KD++ +D+ R L G+ L D +T WR
Sbjct: 425 RTSKDWAAADEARDALNALGVILEDSAGKTTWR 457
>gi|404399554|ref|ZP_10991138.1| cysteinyl-tRNA ligase [Pseudomonas fuscovaginae UPB0736]
Length = 460
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 213/395 (53%), Gaps = 42/395 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNIQKPDMEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKAAK GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKAAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++YHP +R+ L+S+HYRS +NYS L A A+ Y L+ L G A
Sbjct: 281 LDKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALK----GLPNVPAAGGEA 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + F M+DD T F+ + +N L++
Sbjct: 337 FV------------ERFTQAMNDDFGTPEACAVLFE-----MVREINRLREID------- 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERA 357
IE+ + +K++ +LG VLQ D+ L+ D Q LI+ R
Sbjct: 373 -IEAAAGLAARLKQLADVLG---------VLQLEADEFLQAGAAGRVDAAQVEALIQARL 422
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR NKD+++SD+IR +T G+ L D T WR
Sbjct: 423 AARANKDWAESDRIRDQITAMGVVLEDGKGGTTWR 457
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 216/396 (54%), Gaps = 28/396 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L+ P PRV++H++ I D + ++ AY V+F V K YG+LS
Sbjct: 99 MKALKVKPADIYPRVTEHIQDIIDFVKKLEEKGYAYEGSDGVYFEVRKYQEYGKLSKINP 158
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G RV K+NP DFALWK AK GEP W+SPWG GRPGWHIECS MS YL
Sbjct: 159 EDLRKGVRVEPGEGKKNPEDFALWKKAKPGEPKWESPWGKGRPGWHIECSTMSTKYLGES 218
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DLIFPHHENEIAQ+ A V YW+H G V EKMSKSLGNF TIR++
Sbjct: 219 FDIHGGGNDLIFPHHENEIAQTEACTGKEWVRYWLHTGFVMVKGEKMSKSLGNFVTIREL 278
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVAL----SPFQEH 236
+RY +R F++ HYRSPL+Y+ + A + + +Y TL++ +AL +PF+
Sbjct: 279 LQRYSAEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRIALEKAETPFKWD 338
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ + D R +F+ M DD NT+ + F+ A +N L ++K PK+
Sbjct: 339 KEEFELYEVVRDA----RKKFYEAMDDDFNTAEAMKPIFEVA-NAVNRYLEKVEK--PKE 391
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
LRK K V + G+ + + ++ K+ + +V R
Sbjct: 392 S------VLRKALEFFKMVSEVFGI-----FEDYFKEAKETKEEELIELLIEV------R 434
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+A RK K+F +D+IR++L GI L D + TIW+
Sbjct: 435 SALRKQKNFELADKIRSELRELGIQLEDTPQGTIWK 470
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|384129119|ref|YP_005511732.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 226/399 (56%), Gaps = 18/399 (4%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M ++ P +PRV++H+++I D+I ++ AY GDV+F+V+ P YG+LS +
Sbjct: 101 MESIKVKPADVEPRVTEHLQEIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRST 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E G RV +KR+P DFALWK+AKAGEP+W+SPWG GRPGWH EC AM +L
Sbjct: 161 EELEVGARVEPSEKKRDPLDFALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG+DL+FPHHENEIAQ+ A YWMHNG VT +KMSKSLGN+ T+R++
Sbjct: 221 IDIHGGGLDLVFPHHENEIAQAEALTGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ--EHGK 238
RYHP LR ++ HYRSPL++S +++ A A I ++D ++ L Q E K
Sbjct: 281 YRRYHPDVLRLLVLFTHYRSPLDFSWEKMEEAKRAYERIRHAIEDLDM-LKNLQVVEENK 339
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+++ + + + + F +S+D NT L+ F + L +K + +++
Sbjct: 340 ISQLY----EKVKEAEEAFFEDLSEDFNTPSALSHIFA-----LVGELGKVKSRAISERR 390
Query: 299 LSLIESLRKIENEVKEVLR----ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LI 353
+S + L E V +LR I GL + ++++ + L+ ++ +E ++ L+
Sbjct: 391 ISR-QDLSAYEFAVSSILRHMRGIFGLFEDIYPEKPVREVVRRELEAGQVLDERLIDILV 449
Query: 354 EERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ R AR K F +D IR L GI L D T WR
Sbjct: 450 DVRNQARAEKVFKIADYIRDRLKEVGIVLEDTPAGTKWR 488
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 217/392 (55%), Gaps = 40/392 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I +++ ++I AYV GDV F VE YG+LS Q L+
Sbjct: 126 LNVLRPDFEPRATHHIPEIIEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQ 185
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSW SPWG GRPGWHIECSAM+ L FD
Sbjct: 186 LQAGARIEINEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFD 245
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A V+YW+H+G + + EKMSKSL NFFTIR +
Sbjct: 246 IHGGGSDLMFPHHENEIAQSCCAHGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLN 305
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y+ A+R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 306 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAF--------- 356
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + R+ M DD NT + L+ F+ A +N LK +
Sbjct: 357 --GGENFVEAFREA----MDDDFNTPNALSVLFEMA-----REINKLKTEDA-------- 397
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAAR 360
E + + E+ ILGL LQQ +K L+ +E + LI++R AR
Sbjct: 398 EKANGLAARLCELAGILGL---------LQQDPEKFLQAGSDDDEVAKIEALIKQRNEAR 448
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R +LT GI L D T WR
Sbjct: 449 AAKDWTAADAARNELTAMGIVLEDGPNGTTWR 480
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 209/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALR------------GTDANAQPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F + +N LK + + +
Sbjct: 336 EAFEA---RFREAMDDDFNTPEAYSALFD-----LAREVNRLKGED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D + E LI++R ARK KD+
Sbjct: 380 LAAELRKLAKVLGLLQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMSIVLEDGPQGTTWR 459
>gi|359410050|ref|ZP_09202515.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
gi|357168934|gb|EHI97108.1| cysteinyl-tRNA synthetase [Clostridium sp. DL-VIII]
Length = 466
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 218/391 (55%), Gaps = 31/391 (7%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L+ T PR ++++ I I Q+I N AY ++GDV+++ +K NYG+L GQ L++
Sbjct: 102 LKIERATVNPRATEYINDIIKFIEQLIKNGFAYEIDGDVYYSTKKFTNYGKLGGQNLDDL 161
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R++VD RKR+P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DI
Sbjct: 162 QVGARISVDERKRDPMDFAVWKAKKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDI 221
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG+DL FPHHENEIAQS A YWMH V +N+KMSKSL NFFT R+I E
Sbjct: 222 HAGGMDLKFPHHENEIAQSEAVTGKPFAHYWMHAAFVNVDNKKMSKSLNNFFTAREILEE 281
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y A+R ++S HYR +N++ LDSA ++ +Y + + E + E K +
Sbjct: 282 YDADAIRFLMLSGHYRIQINFTKELLDSAKSSIERLYNCINNLE---NLKNEVSKKTLDD 338
Query: 244 PAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
E ++K R+ F +M DD NT+ ++ F ++ K S
Sbjct: 339 KEREYLKSLDKYRENFIEKMDDDFNTADAISVLF-----------DLAKDLNNNINISSS 387
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
E K E ++E+ LG +LQ +K L E ++ +LI++R ARK
Sbjct: 388 SELCEKAEALMRELANPLG---------ILQNHMEKDL------ESEIQELIDKRQQARK 432
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++DF+ +D+IR DL + I L D + W+
Sbjct: 433 DRDFALADKIRDDLKSRNIVLEDTPQGVRWK 463
>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
gi|122967676|sp|Q129L2.1|SYC_POLSJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 462
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 212/395 (53%), Gaps = 57/395 (14%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-----GDVFFAVEKSPNYGRLSGQRLENN 63
PT++PR +D + Q+ +I + AY + GDV +AV K YG+LSG+ L+
Sbjct: 109 PTHEPRATDFVPQMLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDEL 168
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSK 120
RAGERV V K +P DF LWK+AK EP WDSP+GPGRPGWHIECSAM+ L
Sbjct: 169 RAGERVEVLDGKDDPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGES 228
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A WMHNG V +NEKMSKSLGNFFTIR+I
Sbjct: 229 FDIHGGGADLQFPHHENEIAQSEGAFGKPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREI 288
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+Y +R F+I AHYRSPLNYS LD A +++ +Y L
Sbjct: 289 LAKYDAETVRFFIIRAHYRSPLNYSDAHLDDARNSLKRLYTALD---------------- 332
Query: 241 RINPA--AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++PA A D N F A M +D T + F + +N K +
Sbjct: 333 LVSPAVVAIDWTNPFAARFKAAMDEDFGTPEAVAVLFD-----LAGEVN----KTRSAEL 383
Query: 299 LSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
L++SL LGLL PG+Y + L D +++R LI +R
Sbjct: 384 AGLLKSLGG----------CLGLLQSAPGSYLQAGAGLDDASIQR----------LIAQR 423
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A A+K K+F+++D+IR DL +GI L D T W
Sbjct: 424 ADAKKTKNFAEADRIRNDLLGQGIVLKDSPAGTTW 458
>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
gi|392304919|emb|CCI71282.1| cysteinyl-tRNA synthetase [Paenibacillus polymyxa M1]
Length = 467
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/396 (39%), Positives = 223/396 (56%), Gaps = 35/396 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+A L + PRV++ M+ I D I +++ AY +GDVF+ +K +YG+LSGQ L
Sbjct: 101 LAGLNVPAASINPRVTESMDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ VD RK N DF LWKAAK GE W SPWG GRPGWHIECSAM+ HYL
Sbjct: 161 EELQFGIRINVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E AQS YWMHNG++ +NEKMSKSLGN ++ +
Sbjct: 221 LDIHGGGQDLQFPHHECECAQSEVITGKPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE----VALSPFQEH 236
R+ P ALR+F++S HYR+PLNY+ + A ++V I + + + +AL +E
Sbjct: 281 RARHKPEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEE- 339
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
++ + ++ + +F +M DD NT +T F+ +++ + +L++ Q
Sbjct: 340 -----VSAELQMKLDGILQQFGEKMDDDFNTPDAITAVFE----WVSEANLLLQRDVVNQ 390
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+L +++ + + VLRI YSE ++L D +V QLI ER
Sbjct: 391 AEL---QAVLHTFHSMNTVLRI--------YSEPSEELLDG----------EVEQLIAER 429
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K++ ++D+IR L KGI L D + WR
Sbjct: 430 VEARKTKNWGRADEIRDLLATKGIVLEDTAQGMRWR 465
>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [[Clostridium] sticklandii]
Length = 443
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/391 (39%), Positives = 217/391 (55%), Gaps = 39/391 (9%)
Query: 10 TYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERV 69
T PRV++++E I I +I+ AY + GDV+F + YG+LS Q LE G R+
Sbjct: 85 TVHPRVTENIENIITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARI 144
Query: 70 AVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGID 129
V+ K++P DFALWKA K GE W SPWG GRPGWHIECS MSA YL DIH GG D
Sbjct: 145 DVNDEKKHPIDFALWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQD 204
Query: 130 LIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
LIFPHHENEIAQS A YWMHNG++ +N+KMSKSLGNFFT+R I + +
Sbjct: 205 LIFPHHENEIAQSEARSGKQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILSEFSGQVI 264
Query: 190 RHFLISAHYRSPLNYS---VLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA 246
R FL+SAHYR+P+N+S +LQ + + L + + L H K ++N +
Sbjct: 265 RFFLLSAHYRNPVNFSKELILQAKAG-------MERLANSKERLVFTISHAK-GQMNESE 316
Query: 247 EDCINKL---RDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+ ++ L RD F M DD+NT+ ++ F+ A +F N+++ + ++ LSL
Sbjct: 317 LELVSALENHRDRFIEAMDDDINTADAISIIFELA-RFSNTNVTENSSLEWAEKNLSLF- 374
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
NE+ VL I+ KA E + +LI++R A+KNK
Sbjct: 375 ------NELTGVLNII-----------------KAEDTDSNDNEQIEKLIKDRVEAKKNK 411
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
DF+ +D IR +L GI + D + T W+
Sbjct: 412 DFALADAIRDELKSMGIEIEDTRQGTKWKKV 442
>gi|387762186|ref|YP_006069163.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
gi|339292953|gb|AEJ54300.1| cysteinyl-tRNA synthetase [Streptococcus salivarius 57.I]
Length = 440
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 96 LGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 155
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 156 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 215
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 216 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 275
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 276 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 321
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 322 LTEQVNQAE---LQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 365
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 366 -----NYDQTVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 403
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 404 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 437
>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
Length = 468
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 215/400 (53%), Gaps = 36/400 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + DMI +I AY G V++ K YG+LS + L
Sbjct: 99 MEGMNVKPATKHPLATEEICGMVDMIGTLIEKGYAYEKNGTVYYRTRKFKEYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ ++G R V + K + DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLQSGGRSLLVTGEDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YWMHN + +N KMSKSLGNFFT+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFARYWMHNAFLNIDNRKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I+E+Y LR F++SAHYRSPLN+S +D+A + I + L + +
Sbjct: 279 REISEKYDLQVLRFFMLSAHYRSPLNFSADLMDAAKTGLDRIITAADN----LKFLKGNA 334
Query: 238 KTARINPAAEDCINKLR---DEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
K + A ++ K + D F M DD NT+ ++ F+ +K+IN+S + +
Sbjct: 335 KVQEMTSAEKEAFTKTQEYIDSFERAMDDDFNTADAISSVFE-LVKYINTSADGESSAEY 393
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
Q L L+ L +LG++ K E+ ED+ LIE
Sbjct: 394 LQDLLDLLVKLTD----------VLGIIVE---------------KDEEMLAEDIEALIE 428
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
ER AARK K+F+++D+IR +L +GI L D + W+
Sbjct: 429 ERQAARKAKNFARADEIRDELLSRGIVLEDTREGVKWKKA 468
>gi|387783222|ref|YP_006069305.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
gi|338744104|emb|CCB94470.1| cysteine--tRNA ligase (Cysteinyl-tRNA synthetase) (CysRS)
[Streptococcus salivarius JIM8777]
Length = 447
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 103 LGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 162
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 163 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 223 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 283 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 328
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 329 LTEQVNQAE---LQTYLDTFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 373 -----NYDQTVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 410
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 411 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 459
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 217/390 (55%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L PT +PR + + ++ MI ++ AY GDVF+ V K +YG+LS Q LE
Sbjct: 102 LNILRPTKEPRATQTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEA 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
G RV V K NP DF LWK AK GEP+WDSPWG GRPGWHIECSAMS L FD
Sbjct: 162 LEQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFD 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DL FPHHENEIAQS A + + +YW+H+G V N EKMSKSL NFFTI ++ E
Sbjct: 222 IHAGGSDLRFPHHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
YHP +R+FL S YRS +NYS LD+A +V ++ L+D E +
Sbjct: 282 EYHPEVIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIE-------------PV 328
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
D N+ ++F M +D NT L F A K IN+ + K K L
Sbjct: 329 EVNLPDDANEYEEKFIKAMDNDFNTPEALAVLFSLA-KEINTLKTVNKYKASGYAFL--- 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LRK+ +LG+L ++++ + K + + ++ +LI ERA A+K+
Sbjct: 385 --LRKL-------CDVLGIL----FTDIEEYFK----QGDGIDVSEIEKLIAERAQAKKD 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++++D+IR +L +GI L D T W+
Sbjct: 428 KNYARADEIRNELQNQGIILEDSATGTTWK 457
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase, partial [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 220/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 111 PDVEPRATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGA 170
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG
Sbjct: 171 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGG 230
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 231 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 290
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 291 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGE 339
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 340 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASE 382
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ ++E+ ++G+L Y + LK A E+ E + LI+ R +R +KD++
Sbjct: 383 LGALMRELADVIGIL----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWAN 436
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 437 ADMARDKLTEMGIVLEDGPEGTTWR 461
>gi|340397950|ref|YP_004726975.1| cysteinyl-tRNA synthetase [Streptococcus salivarius CCHSS3]
gi|338741943|emb|CCB92448.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Streptococcus salivarius CCHSS3]
Length = 447
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 103 LGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 162
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 163 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 223 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 283 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 328
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 329 LTEQVNQAE---LQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 373 -----NYDQTVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 410
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 411 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|421782075|ref|ZP_16218534.1| cysteine--tRNA ligase [Serratia plymuthica A30]
gi|407755631|gb|EKF65755.1| cysteine--tRNA ligase [Serratia plymuthica A30]
Length = 461
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 209/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I ++ ++I+ D AYV GDV F+++ P YG LS Q L+ +AG
Sbjct: 108 PDQEPRATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +D KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEIDDVKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSSCAHDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALR------------GTDANAQPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F + +N LK + + +
Sbjct: 336 EAFEA---RFREAMDDDFNTPEAYSALFD-----LARDVNRLKGED--------MAAANG 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D + E LI++R ARK KD+
Sbjct: 380 LAAELRKLAKVLGLLQQEPEQFLQSGAQADDGEVAEIE-------ALIKQRNDARKAKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L I L D + T WR
Sbjct: 433 ALADAARDRLNEMNIVLEDGPQGTTWR 459
>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 477
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 220/383 (57%), Gaps = 22/383 (5%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGERVAV 71
PRVS+ M +I M+ ++I+ AYV++ GDV+++VEK +YG+LSG+ L++ +AG R+ V
Sbjct: 112 PRVSETMPEIIAMVQKLIDKGYAYVIDNGDVYYSVEKFSHYGKLSGRSLDDMQAGARIEV 171
Query: 72 DSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLI 131
++ K +P DFALWKAAK GEPSWDSPWG GRPGWHIECS MS YL KFD HGGG DLI
Sbjct: 172 NTAKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGGGSDLI 231
Query: 132 FPHHENEIAQSCAACQD--SNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLAL 189
FPHHENEIAQS A D S YW+HNG +T +NEKMSKS NFFT++ I + Y +
Sbjct: 232 FPHHENEIAQSQACIGDDHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDILKEYPGEVI 291
Query: 190 RHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAEDC 249
R F++ HYRSPL++S +L A ++ LQ+ + + +
Sbjct: 292 RFFILQTHYRSPLDFSDERLKEAQTSL----GRLQNTKAYVDELSAKQGESDTAAELAAK 347
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
+LR F+ M DD NT+ ++ F ++ +N+ ++ + +K+
Sbjct: 348 AEELRKAFYEAMDDDFNTALAISQMFA-----LSKDINIYYQEVVNGTKAFDAADFKKVA 402
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
E+ I+G+ + ++KA LT++ + +I R ARK K+++ +D
Sbjct: 403 AVYAEMAEIIGIF----------EQQEKAAADDGLTDKLMEIIITLRQDARKEKNWAVAD 452
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR L G+ L D W+
Sbjct: 453 KIRDALKDAGVVLEDTPSGVRWK 475
>gi|418016970|ref|ZP_12656529.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
gi|345527663|gb|EGX30971.1| cysteinyl-tRNA synthetase [Streptococcus salivarius M18]
Length = 447
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 103 LGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 162
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 163 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 223 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 283 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 328
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 329 LTEQVNQAE---LQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 373 -----NYDQTVKDAFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 410
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 411 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 220/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG
Sbjct: 168 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASE 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ ++E+ ++G+L Y + LK A E+ E + LI+ R +R +KD++
Sbjct: 380 LGALMRELADVIGIL----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 434 ADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|349574997|ref|ZP_08886926.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
gi|348013441|gb|EGY52356.1| cysteine--tRNA ligase [Neisseria shayeganii 871]
Length = 469
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 213/405 (52%), Gaps = 56/405 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P+ ++H+ Q+ MI ++I AY + GDV++AV + YG+LSG+ L++
Sbjct: 103 LGVLRPDVEPKATEHVAQMIRMIERLIAKGKAYAADNGDVYYAVREFAAYGQLSGKSLDD 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPS-WDSPWGPGRPGWHIECSAMSAHYLSSKF 121
RAG+RV VD KR+P DF LWKAAK E WDSPWG GRPGWHIECSAM F
Sbjct: 163 LRAGQRVEVDGFKRDPLDFVLWKAAKPNEADFWDSPWGRGRPGWHIECSAMGGELFGDTF 222
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQ------------DSNVSYWMHNGHVTNNNEKMSK 169
DIHGGG DL FPHHENEIAQS A +S+V YW+HNG + + EKMSK
Sbjct: 223 DIHGGGADLQFPHHENEIAQSVGALGHSCGHTHGGKTIESHVKYWLHNGFIRVDGEKMSK 282
Query: 170 SLGNFFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVA 229
SLGNFFTIR + + Y P +R F++ AHYRSPLNYS LD A A+ +Y L++ A
Sbjct: 283 SLGNFFTIRDVLKAYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTALKNTPPA 342
Query: 230 LSPFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNML 289
E N F+A M+DD T + F+ L
Sbjct: 343 DFTLSEEA-------------NDYTRRFYAAMNDDFGTVEAVAVLFE------------L 377
Query: 290 KKKQPKQQQLSLIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEE 347
+ K L L+ + +LGLL P A+ + L+ E
Sbjct: 378 AGEMNKTNSAELAGCLKALGG-------VLGLLQREPQAFLQ--------GGSTGGLSNE 422
Query: 348 DVLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
++ LI R AR +K++++SD+IR LT + I L D T WR
Sbjct: 423 EIETLIARRKQARADKNWAESDRIRDLLTAENIILEDGAGGTTWR 467
>gi|410690076|ref|YP_006963796.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
gi|389597196|gb|AFK89949.1| Cysteinyl-tRNA synthetase [Salmonella sp. 14]
Length = 463
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 212/394 (53%), Gaps = 40/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +I AY+ E GDV F+V P YG+LS Q LE
Sbjct: 103 LNILRPELEPRATHHISEIINITETLIRRGHAYIAENGDVMFSVSTDPGYGKLSRQDLEQ 162
Query: 63 NRAGERVAVD--SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
++G+RV D KRN DF LWK +K GEPSW SPWG GRPGWHIECSAM+ +L
Sbjct: 163 LQSGDRVRTDVVDVKRNSMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKHLGHH 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSLGNFFT+R +
Sbjct: 223 FDIHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDV 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y +R+FL+S HYRS LNYS L A A+ +Y +L+ + +++P A
Sbjct: 283 LKYYDAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGTDKSVAPAGGEAFEA 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R A M DD NT + F A +N LK +
Sbjct: 343 RFIEA---------------MDDDFNTPEAYSVLFDMA-----REVNRLKSVDMAEAN-G 381
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ LRK+ +LGLL P A+ + + D + EL LI++R
Sbjct: 382 MASHLRKLSG-------VLGLLEQEPEAFLQSGVKTGDAEVAEIEL-------LIQQRLD 427
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK K++S +D R L GI L D + T WR
Sbjct: 428 ARKAKNWSAADSARDRLNEMGIVLEDGPQGTTWR 461
>gi|399545485|ref|YP_006558793.1| cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
gi|399160817|gb|AFP31380.1| Cysteinyl-tRNA synthetase [Marinobacter sp. BSs20148]
Length = 480
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 220/394 (55%), Gaps = 33/394 (8%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + + + MI +I D AY + GDV+F+V +YG+LS ++L
Sbjct: 115 ARLGVLLPNAEPRATAFISDMIAMIKTLIAGDHAYAADNGDVYFSVSSFADYGKLSRKKL 174
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V+ KR+PADFALWKAAK E W SPWG GRPGWHIECSAM+ H L
Sbjct: 175 EDLLAGARVDVEQAKRSPADFALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDT 234
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FD+HGGG DL+FPHHENEIAQS A + V+ WMH G + N EKMSKSLGNFFTIR+I
Sbjct: 235 FDLHGGGPDLLFPHHENEIAQSECATGHTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREI 294
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E Y +R+FL+S+HYRS ++YS L + ++ +Y L+
Sbjct: 295 METYPAEVVRYFLVSSHYRSQVDYSEDNLIESGRSLTKLYNALRG--------------- 339
Query: 241 RINPAAEDCINKLRDE--FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ P A D + + + F RM DD N + + L + +N ++ +Q
Sbjct: 340 -VTPLASDAVARTSHDTLFDKRMDDDFNCAGAMA-----ILHALAGEMNQQRRDGDEQAA 393
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ L ++ + ILGLL E+ Q + + EL+ E + +I+ RA
Sbjct: 394 AASATVLVRLGS-------ILGLLQQD--PELFFQSDSGSGEGNELSAEQIETMIQSRAD 444
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARK +DF+ +DQIR +L + + L D + T WR
Sbjct: 445 ARKTRDFAGADQIRDELLTRRVILDDSREGTSWR 478
>gi|350531832|ref|ZP_08910773.1| cysteinyl-tRNA synthetase [Vibrio rotiferianus DAT722]
Length = 460
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 221/387 (57%), Gaps = 39/387 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q LE +AG
Sbjct: 108 PDVEPRATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASE 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ ++G+L P A+ LK A E+ E + LI+ R +R KD+
Sbjct: 380 LGALMRELAEVIGILHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDW 431
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R LT GI L D + T WR
Sbjct: 432 ANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|398838299|ref|ZP_10595579.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM102]
gi|398116381|gb|EJM06145.1| cysteinyl-tRNA synthetase [Pseudomonas sp. GM102]
Length = 460
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 214/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ ++ MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIAGMQSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK AK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKGAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ L G A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALK----GLPNVAPVGGEA 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + F M+DD T F+ + +N L++ S
Sbjct: 337 FV------------ERFTQVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + +KE+ +LG+L E L+ A R + E D LI+ R AR
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQ----LEADDFLQAGAEGRVDAAEVDA--LIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|330810612|ref|YP_004355074.1| cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423698259|ref|ZP_17672749.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388005576|gb|EIK66843.1| cysteine--tRNA ligase [Pseudomonas fluorescens Q8r1-96]
Length = 460
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 212/392 (54%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDLEPRATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K +P DF LWK AK GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++YHP +R+ L+S+HYRS +NYS L A A+ Y L+ L G A
Sbjct: 281 LDKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALK----GLPSVPAAGGEA 336
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ F M+DD T F+ + +N L++ S
Sbjct: 337 FVA------------RFTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+ + + +KE+ +LG+L A + LQ + + AE V LI+ R AR
Sbjct: 372 DLNAAAGLAARLKELASVLGVLQLEA-DDFLQAGAEGRVDAAE-----VEALIQARLTAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR LT G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R +
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNES 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT GI L D T WR
Sbjct: 435 RATKDWAAADAARNALTEMGIILEDGPNGTTWR 467
>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|259511840|sp|C3JYD3.1|SYC_PSEFS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 462
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/394 (40%), Positives = 216/394 (54%), Gaps = 40/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNILKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWK K GEPSW+SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDEAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRS +NYS L A A+ Y L+ +++P A
Sbjct: 281 LEKYHPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLP-SVAPAGGEAFVA 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
R F M+DD T F+ + +N L++ S
Sbjct: 340 R---------------FTEVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+++ + +KE+ +LG+L P + L+ A R + E D LI+ R A
Sbjct: 372 DLDAAAGLAARLKELASVLGVLQMKPEDF------LQAGAEGRVDAAEVDA--LIQARLA 423
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR NKD+++SD+IR LT G+ L D T WR
Sbjct: 424 ARANKDWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R +
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNES 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT GI L D T WR
Sbjct: 435 RATKDWAAADAARNALTEMGIILEDGPNGTTWR 467
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|417320155|ref|ZP_12106701.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
gi|31076996|sp|Q87QJ9.1|SYC_VIBPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 220/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG
Sbjct: 168 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASE 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ ++E+ ++G+L Y + LK A E+ E + LI+ R +R +KD++
Sbjct: 380 LGALMRELADVIGIL----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 434 ADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|421451477|ref|ZP_15900838.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
gi|400181908|gb|EJO16170.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius K12]
Length = 447
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 214/394 (54%), Gaps = 58/394 (14%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE+
Sbjct: 103 LGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDL 162
Query: 64 RAGERVAVDS---RKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
G D+ RK NP DFALWKAAK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 163 EIGASGRTDAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDT 222
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+ +
Sbjct: 223 IDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDM 282
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK-- 238
+ LR FL + YR P+N++ + + D EV L +
Sbjct: 283 LQTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHSLP 328
Query: 239 -TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T ++N A + D F M DD NT++ +T F D K+INS
Sbjct: 329 LTEQVNQAE---LQTYLDTFQEAMDDDFNTANGVTVLF-DMAKWINSG------------ 372
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ +++ +++L++ G++ + E E+ +ED+ +LIEER
Sbjct: 373 -----NYDQTVKDVFEKMLQVFGIV----FEE-------------EVLDEDIEKLIEERQ 410
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AAR NKDF+ +D+IR +L +GI L+D + W
Sbjct: 411 AARANKDFATADRIRDELAAQGIKLLDTKEGVRW 444
>gi|433657370|ref|YP_007274749.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
gi|432508058|gb|AGB09575.1| Cysteinyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
Length = 436
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/385 (40%), Positives = 220/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 84 PDVEPRATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGA 143
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG
Sbjct: 144 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGG 203
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 204 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 263
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 264 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAP-----------AGGE 312
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 313 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASE 355
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ ++E+ ++G+L Y + LK A E+ E + LI+ R +R +KD++
Sbjct: 356 LGALMRELADVIGIL----YQDPEAFLKGNAGNDDEVAE--IEALIKLRNDSRASKDWAN 409
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 410 ADMARDKLTEMGIVLEDGPEGTTWR 434
>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|229558710|sp|B4U9I4.1|SYC_HYDS0 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 488
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 222/395 (56%), Gaps = 12/395 (3%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P +PRV++HME+I +I+++I AY +GD++F+++ +YG+LS +
Sbjct: 101 MEAINVKPANVEPRVTEHMEEIISLISKLIELGKAYESDGDIYFSIDSFKDYGKLSKRSP 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E AG R+ +KRNP DFALWKA+K+ EP W+SPW GRPGWH EC AM +L
Sbjct: 161 EELEAGARIEPSLKKRNPLDFALWKASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIH GGIDL+FPHHENEIAQ+ + YWMHNG VT +KMSKSLGNF T+++I
Sbjct: 221 IDIHAGGIDLVFPHHENEIAQAESITGKPFARYWMHNGLVTVGGKKMSKSLGNFVTLKEI 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YHP LR ++ HYRSPL++S +++ A + ++D E L + GK
Sbjct: 281 YTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETKKAYERLKSAIEDIE-PLKAIAKEGKPV 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ +++F+ +S+D NTS + F + LN K + K ++
Sbjct: 340 -VDIDFYSLEKSTQEQFYKALSEDFNTSLAIAHIFNAV-----AELNKAKTESFKIGYIT 393
Query: 301 --LIESLRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+E + N +K+ L+ I GLL L+ L+ + ++ E + LI+ R
Sbjct: 394 PKELEGYLFLANSLKQTLKDIFGLLEENTLQNTLKTLEPAS--SVNISTEFLEILIKARN 451
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
A++NKDF +D IR +L GI L D TIW+
Sbjct: 452 LAKENKDFKVADFIRDELLNYGIKLEDTKAGTIWK 486
>gi|365840758|ref|ZP_09381935.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
gi|364560501|gb|EHM38435.1| cysteine--tRNA ligase [Anaeroglobus geminatus F0357]
Length = 481
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 218/384 (56%), Gaps = 21/384 (5%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PRVS+HM+ I MI +++ AY ++GD+++ V NYG LS + L++ AG R+ VD
Sbjct: 114 PRVSEHMDDIISMIGELVKKGHAYELDGDIYYRVRSFENYGELSHRSLDDMMAGARIEVD 173
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK NP DFALWK+AK GEP+WDSPWG GRPGWHIECSAMS YL FD HGGG DLIF
Sbjct: 174 DRKENPMDFALWKSAKPGEPAWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDLIF 233
Query: 133 PHHENEIAQSCAAC-QDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRH 191
PHHENEIAQ+ A C V+YW+HNG +T ++EKMSKSL NFF ++ + E Y ALR+
Sbjct: 234 PHHENEIAQTEACCGHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLEHYSADALRY 293
Query: 192 FLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR---INPAAED 248
FLIS HYRSPL++S +L + ++ + + + L G A +N A
Sbjct: 294 FLISNHYRSPLDFSDERLTEMTRSLERLGTAIDNTLYLLDLPSGSGSAASAQLLNDA--- 350
Query: 249 CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKI 308
K ++F M DD NT+ F+ A K LN+ K + L ++
Sbjct: 351 --RKAMEDFEEAMCDDFNTALASAAMFELAKK-----LNIYKNEVVTDDVPVDASVLAEV 403
Query: 309 ENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKS 368
++ K + ILG+L ++ V DK AEL + ++E R R K ++ +
Sbjct: 404 KHIFKTMTDILGILED-RWNGVRGGTGDK--DYAELMD----VILELRQECRAQKQYALA 456
Query: 369 DQIRADLTRKGIALMDMGKETIWR 392
D IR L+ GI + D + W+
Sbjct: 457 DAIRDKLSELGITIEDSPQGARWK 480
>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
gi|187629853|sp|B0KUU0.1|SYC_PSEPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
Length = 460
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSMAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDL 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RTDKNWAESDRIRDQLTAMGVVLEDSKGATTWR 457
>gi|403071329|ref|ZP_10912661.1| cysteinyl-tRNA ligase [Oceanobacillus sp. Ndiop]
Length = 466
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 215/394 (54%), Gaps = 38/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T+ PRV + M+ I I ++ AY EGDV+F YG+LS Q ++
Sbjct: 104 LGVKKATHNPRVMETMDDIIAFIDALVQKGFAYEAEGDVYFKPRAFNGYGKLSHQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R+G R+ V +K +P DFALWK AK GE SWDSPWG GRPGWHIECSAM YL DI
Sbjct: 164 RSGARIQVGEKKNDPLDFALWKKAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNF R +
Sbjct: 224 HAGGQDLAFPHHENEIAQSEAMTGHTFANYWMHNGYINIDNEKMSKSLGNFVLTRDLVAH 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P LR F++S HYR+P+N++ L+SA ++ I + EH K + ++
Sbjct: 284 HDPQVLRFFMLSVHYRNPINFTEELLESAKNSYDRIKTAYHNL--------EHRKQSSMD 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ I+ L++ F A M DD NT++ ++ F D K N L Q KQ
Sbjct: 336 LINDTDVWIPLIDGLKNRFEAEMDDDFNTANAISVLF-DLSKEANVYL------QSKQTS 388
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
++I+ +K + +L++LG+ + EL +E + LI ER
Sbjct: 389 AAVIDHFQKT---IMTLLQVLGI---------------NLAETEELLDETIEALIVERNE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+++D+IR L + I L D + W+
Sbjct: 431 ARKNRDFARADEIRDLLKERAIILEDTPQGVRWK 464
>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|61216117|sp|Q5L429.1|SYC_GEOKA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 466
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 216/394 (54%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++++ I + I +I+ AY V+GDV++ K YG+LS Q ++
Sbjct: 105 LGCKKADIHPRVTENIDTIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDEL 164
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ + +K +P DFALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 165 QAGARIEIGEKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDI 224
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YW+HNG++ NNEKMSKSLGNF + I
Sbjct: 225 HAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIRE 284
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P LR F++S HYR P+NYS L+SA + L+ + A S Q H A N
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESAR-------RGLERLKTAYSNLQ-HRLQASTN 336
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
D I +R F M DD NT++ + F+ A K N L Q K
Sbjct: 337 LTDNDEEWVSRIADIRASFIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTS 389
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+I + + E +++ +LGL LK+ EL +E++ LI++R
Sbjct: 390 EKVIHAFLR---EFEQLADVLGL----------------TLKQDELLDEEIEALIQKRNE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ +D+IR +L K I L D + T W+
Sbjct: 431 ARKNRDFALADRIRDELRAKNIILEDTPQGTRWK 464
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 211/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +P + H+ +I ++ ++I + AYV + GDV F+VE P+YG LS Q L+ +AG
Sbjct: 108 PDLEPHATHHIPEIIELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F A M DD NT + F I +N LK + + +
Sbjct: 336 ---AEFEARFRAAMDDDFNTPEAYSVLFD-----IAREVNRLKTED--------MTAANA 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ +LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAHVLGLLEQDPELFLQSGAQTDDDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADSARDQLNELGIVLEDGPQGTTWR 459
>gi|331090783|ref|ZP_08339630.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330399891|gb|EGG79550.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 468
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 215/395 (54%), Gaps = 30/395 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + +MI+ +I+ AY G V+F K YG+LS + L
Sbjct: 99 MEGMNVKPATKHPLATEEICGMIEMISDLIDKGYAYEKNGTVYFRTRKFEEYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ ++G R V + K + DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLQSGGRSLLVTGEDEKEDSLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YW+HN + +N KMSKSLGNF T+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFAKYWLHNAFLNIDNHKMSKSLGNFRTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y LR F++SAHYRSPLN+S ++S+++ + I + + + L E
Sbjct: 279 REIGEKYDLQVLRFFMLSAHYRSPLNFSAALMESSANGLERILTAVANLKHLLGVVSEEN 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
TA ++ N +R + M DD NT+ + F D +KF N++ + K+ Q
Sbjct: 339 MTAEEREQVKETENFVR-AYEEAMEDDFNTADAIASIF-DLVKFANTTTSAQSSKEYLQT 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
LI L +LGL+ K E+ ED+ LIEER
Sbjct: 397 LYDLIVKLSD----------VLGLIVE---------------KEEEMLAEDIEALIEERQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK ++F ++D+IR +L +KGI L D + W+
Sbjct: 432 AARKERNFQRADEIRDELLKKGIILEDTREGVKWK 466
>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511836|sp|C4K6G8.1|SYC_HAMD5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 461
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 220/391 (56%), Gaps = 34/391 (8%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLE 61
+L L P +PR ++H+ ++ + Q+++ AYV GDV F+VEK+P+YG LS Q LE
Sbjct: 102 ELNLLRPDLEPRATEHITEMITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLE 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+AG RV V K +P DF LWK +K EP W SPWG GRPGWHIECSAM+A L F
Sbjct: 162 QLQAGARVEVMESKHHPMDFVLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHF 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DL+FPHHENE+AQS A + V+ WMH+G + N EKMSKSL NF TIR +
Sbjct: 222 DIHGGGADLMFPHHENEMAQSICAHKAPYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLL 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
+RY P LR+FL+SAHYRSPLNY+ L A A+ +Y L+D F E G++
Sbjct: 282 QRYDPETLRYFLLSAHYRSPLNYTEENLKQARIALTRLYTALRDTNQ--KAFPEGGES-- 337
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
F + M+DD NT F A +N LKK+ PK L
Sbjct: 338 -----------FEKRFVSAMNDDFNTPEAYAVLFDTA-----REINKLKKEHPKAAD-GL 380
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
LRK+ ++LGLL G+ +L KD + AE+ + LIE+R AR
Sbjct: 381 AAQLRKMG-------KVLGLLESGSLLSLLNPEKDDRHQSAEIAD-----LIEKRNLARA 428
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+K++ ++D R L G+ + D T WR
Sbjct: 429 HKNWEEADNARTRLFEMGVVVEDTENGTNWR 459
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/398 (39%), Positives = 216/398 (54%), Gaps = 31/398 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L+ P P+V++H+ +I I ++I AY E V+F V+K NYG+LS L
Sbjct: 100 MATLKVKPADIYPKVTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ +G R+ +K+NP DFALWK AK EP W+SP+G GRPGWHIECSAMS+ YL +
Sbjct: 160 EDLYSGVRIETSEKKKNPEDFALWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQ 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS A V+YW+H G V N EKMSKSLGNF TI I
Sbjct: 220 FDIHGGGRDLSFPHHENEIAQSVAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDI 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++ Y P LR F I HYRSP++Y+ + + + IY +++ ++L ++ G
Sbjct: 280 SKEYDPEILRFFFIQRHYRSPIDYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWG 339
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
D + + F+ M+ D NT L F+ +++ +N + LS
Sbjct: 340 ENEFLLYDILKNSKHNFYEAMNSDFNTVEALKSVFE-----VSNGVN---------KYLS 385
Query: 301 LIES-----LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEE 355
L+E+ L K + K V I GL Y + + D EE + LIE
Sbjct: 386 LVETPSEGLLLKAFDFFKIVGEIFGLFE--NYFKTSSESND---------EEFIKFLIEL 434
Query: 356 RAAARKNKDFSKSDQIRADLTRKGIALMDMGKE-TIWR 392
R+ R K++ SD+IR L G + D KE TI++
Sbjct: 435 RSDLRLQKNYEMSDKIRDGLKNIGYLIEDNPKEGTIFK 472
>gi|420155520|ref|ZP_14662380.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
gi|394759006|gb|EJF41818.1| cysteine--tRNA ligase [Clostridium sp. MSTE9]
Length = 467
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/392 (39%), Positives = 225/392 (57%), Gaps = 32/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L P T P ++ ME I +I ++ AY GDV+F +K YG+LS Q L++
Sbjct: 102 LNVRPATVHPLATESMEDILQIIQTLVEKGYAYAAPNGDVYFRTKKFDEYGKLSHQPLDD 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R++VD K + DFA+WK+AK GEPSWDSPWG GRPGWHIECSAM+ H+L + D
Sbjct: 162 LQAGARISVDEVKEDAMDFAVWKSAKPGEPSWDSPWGKGRPGWHIECSAMARHFLGNTID 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DLIFPHHENEIAQS YWMHNG++ +N KMSKSL NFFT+R++
Sbjct: 222 IHCGGQDLIFPHHENEIAQSECCNGVPFAHYWMHNGYINVDNHKMSKSLNNFFTVREVAN 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R ++S+ YRSP+NYS+ ++ A+ +Y +C L+ +++
Sbjct: 282 VYGYEPIRFLMVSSQYRSPINYSIEIIEQCKSALDRLY----NCRDNLTFARDNAPEGLK 337
Query: 243 NPAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ E D ++ R F M DDLNT+ ++ F D + IN++L P ++
Sbjct: 338 DGEQEQIDALDSFRQRFITAMDDDLNTADAISVLF-DLAREINTNL------IPGEKSKE 390
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
L + K+ E+ +V LGL L Q KD++L +E++ LI++R AR
Sbjct: 391 LYNAALKLYGELADV---LGL---------LYQRKDQSL------DEEIEALIQQRTDAR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KNKD++ +D+IR +L + + L D + W+
Sbjct: 433 KNKDWATADRIRDELKARHVVLEDTPQGIKWK 464
>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
Length = 460
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 157/390 (40%), Positives = 214/390 (54%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ L G A +
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR----GLPRVAAKGGEAFV 338
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ F M+DD T F D ++ IN + + S +
Sbjct: 339 ------------ERFSVAMNDDFGTPEACAVLF-DLVREIN------------RLRDSDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
++ + ++E+ +LG+L A + L+ + + AE V LI+ R AR +
Sbjct: 374 DAAAGLAGRLRELGDVLGVLQLDA-DDFLRAGAEGKVDAAE-----VEGLIQARLQARAD 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K++++SD+IR LT G+ L D T WR
Sbjct: 428 KNWAESDRIRDQLTAMGVVLEDSKGATTWR 457
>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 457
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 220/401 (54%), Gaps = 57/401 (14%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQR 59
A L PPT++PR ++ + Q+ D+I ++ N AY E GDV FAV + P YG+LSG+
Sbjct: 101 FAALGLEPPTHEPRATEFVPQMLDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKS 160
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHY 116
L+ RAGERVAV K +P DF LWK+AK EP+ WDSP+G GRPGWHIECSAMS
Sbjct: 161 LDELRAGERVAVAGGKEDPLDFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCAL 220
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L +FD+HGGG+DL FPHHENEIAQS A V+YW+HNG + +NEKMSKSLGNFFT
Sbjct: 221 LGERFDLHGGGMDLQFPHHENEIAQSEGAFGHPFVNYWLHNGFLNVDNEKMSKSLGNFFT 280
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQD-----CEVALS 231
I + +++ +R F++ HYRSP N++ LD A A+ +Y L CEV S
Sbjct: 281 IADVLKKFDGETVRFFMLRTHYRSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWS 340
Query: 232 PFQEHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKK 291
+P A F A M DD NT L F+ A +F S + +
Sbjct: 341 -----------DPRAA--------AFKAAMDDDFNTPGALAVLFELANEFNRSRDAAMAR 381
Query: 292 KQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAE-LTEEDVL 350
L+ SL GA +LQQ L+ + + ++
Sbjct: 382 ---------LLVSL-------------------GAVLGILQQAPRAFLQAGTGVDDAEIA 413
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+ IE RA A++ + F+ +D+IRA+L +G+ L D + T W
Sbjct: 414 RQIEARATAKRERRFADADRIRAELAAQGVELKDTPQGTTW 454
>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
gi|336431208|ref|ZP_08611062.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
gi|153796726|gb|EDN79146.1| cysteine--tRNA ligase [Ruminococcus gnavus ATCC 29149]
gi|336020130|gb|EGN49847.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_58FAA]
Length = 468
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 153/398 (38%), Positives = 218/398 (54%), Gaps = 36/398 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + DMI +I+ AY G V++ K YG+LS + L
Sbjct: 99 MEGMNVKPATKNPLATEEIGGMIDMIQTLIDKGYAYEKNGTVYYRTRKFEGYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ ++G R V + K + DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLQSGGRSLLVTGEDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DLIFPHHENEIAQS AA YW+HNG + +N KMSKSLGNFFT+
Sbjct: 219 GEQIDIHAGGEDLIFPHHENEIAQSEAANGKDFSKYWLHNGFLNIDNRKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y LR F++SAHYRSPLN+S +++A + + I + + L E
Sbjct: 279 REIGEKYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERIVTAAEHLKFLL----EGA 334
Query: 238 KTARINPAAEDCINKLRD---EFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
KT + + I K ++ +F M DD NT+ + F D +KFIN++ + K+
Sbjct: 335 KTENMTEKEQAKIVKSQEFTRKFEKAMDDDFNTADAIAAVF-DLVKFINTNTDGESSKEY 393
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIE 354
Q LS + +L +LG++ K E+ +D+ LI
Sbjct: 394 LQNLLSQLVALTD----------VLGIIVE---------------KEQEMLADDIEALIA 428
Query: 355 ERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ER AARK ++F+++D+IR +L KGI L D + W+
Sbjct: 429 ERQAARKERNFARADEIRDELLAKGIILEDTREGVKWK 466
>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
Length = 478
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 223/404 (55%), Gaps = 46/404 (11%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEG-DVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR + HM+ I M+ +IN + AYV DV++ V K NYG+LSG++ +
Sbjct: 104 LNILPPNQEPRATAHMDNIIAMVKTLINKNYAYVASNNDVYYRVGKFGNYGQLSGKKPDE 163
Query: 63 NRAGERVAVDSRKRNPADFALWKA---------AKAGEPSWDSPWGPGRPGWHIECSAMS 113
AG RV V K +P DFALWKA K SW+SPWG GRPGWHIECSAMS
Sbjct: 164 LMAGARVEVGDIKEDPRDFALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMS 223
Query: 114 AHYLSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGN 173
L + FDIHGGG DL FPHHENEIAQS AA V+YW+H G V + EKMSKSLGN
Sbjct: 224 KSCLGNSFDIHGGGPDLPFPHHENEIAQSEAANGCKYVNYWLHAGAVRVDGEKMSKSLGN 283
Query: 174 FFTIRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPF 233
FFTIR + ++YH +R+ ++++HYRS +NYS L A + YQTL+
Sbjct: 284 FFTIRDVLKKYHSEVIRYLIVNSHYRSSINYSEDNLIEAKSGLDRFYQTLK--------- 334
Query: 234 QEHGKTARINPAAEDCINKLRDE-----FHARMSDDLNTSHILTGAFQDALKFINSSLNM 288
+ PAA I L D F M+DD NT L+G ++ +K IN+
Sbjct: 335 ----HYTDVEPAA---IESLSDSVYYQHFVDSMNDDFNTRIALSGMYE-LIKTINTV--- 383
Query: 289 LKKKQPKQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED 348
+ E +K+ E+K + ILG+L +E LQ +DK + L+ +
Sbjct: 384 ---------AVDDAEKAKKLVAELKAMANILGVLQADP-TEFLQA-EDKTSQVVGLSIDV 432
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+ LI +R A+K+K + ++D IR L +G+ L D + T WR
Sbjct: 433 IETLISQRIQAKKDKQYQRADDIRQQLDDQGVLLEDSREGTAWR 476
>gi|407694735|ref|YP_006819523.1| cysteinyl-tRNA synthetase [Alcanivorax dieselolei B5]
gi|407252073|gb|AFT69180.1| Cysteinyl-tRNA synthetase [Alcanivorax dieselolei B5]
Length = 460
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 214/393 (54%), Gaps = 37/393 (9%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L LPPT P+ +DH+ + MI +I AY +G V FAVE P+YG+LSG+ L
Sbjct: 100 MGRLNALPPTVVPKATDHIGDMLTMIETLIAKGHAYEADGHVLFAVESMPDYGKLSGRNL 159
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+P DF LWK + +P WDSPWG GRPGWHIECSAM +L
Sbjct: 160 EDMLAGARVEVADYKRHPGDFVLWKPSSDDQPGWDSPWGRGRPGWHIECSAMIHKHLGDV 219
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQ C A V YWMHNG++ + EKMSKSLGNF +R++
Sbjct: 220 IDIHGGGQDLIFPHHENEIAQGCCAHGTEYVRYWMHNGYINIDGEKMSKSLGNFRLVREL 279
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+ Y LR L+S+HYRSPLN+S LD A ++ +Y L G+
Sbjct: 280 LKEYAGEVLRFALLSSHYRSPLNFSAEVLDQAGKSLDGLYYALL------------GRGE 327
Query: 241 RINPAAEDCINKLRDEFHARMS--DDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
++ P D +L ++ ++ DDLNT+ ++ AL + + LN K P++
Sbjct: 328 QVEP---DTGYRLPEDHPVLLALRDDLNTAEAIS-----ALHAVAAKLN--KADLPEKPV 377
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
L + E S+ + +++ L +++ L+ ER A
Sbjct: 378 LKAELLAGAGLLGLLE-------------SDPVAWFQNQGSADDGLANDEIDALVAERTA 424
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
A+K +DF+++DQIR L GI L D + T W
Sbjct: 425 AKKARDFARADQIRDQLKDAGIQLEDTREGTRW 457
>gi|374320668|ref|YP_005073797.1| cysteinyl-tRNA synthetase [Paenibacillus terrae HPL-003]
gi|357199677|gb|AET57574.1| cysteinyl-tRNA synthetase [Paenibacillus terrae HPL-003]
Length = 467
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 223/392 (56%), Gaps = 27/392 (6%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
+ L + PRV++ M+ I + I ++++ AY +GDVF+ +K YG+LSGQ L
Sbjct: 101 LTGLNVPAASMNPRVTESMDLIIEFIKELVDKGYAYENDGDVFYRTKKFKCYGQLSGQNL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E + G R+ VD RK N DF LWKAAK GE W SPWG GRPGWHIECSAM+ HYL
Sbjct: 161 EELQFGIRINVDERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DL FPHHE E AQS YWMHNG++ +NEKMSKSLGN ++ +
Sbjct: 221 LDIHGGGQDLQFPHHECECAQSEVITGKPLARYWMHNGYIRIDNEKMSKSLGNGILVKDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
R+ P ALR+F++S HYR+PLNY+ + A ++V I + + + L+ + +
Sbjct: 281 RARHKPEALRYFMLSTHYRNPLNYNHETMSQAENSVERIANAVANVQHRLASALKGNEEV 340
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ + ++ + +F +M DD NT +T F+ +++ + ++L++ Q +L
Sbjct: 341 SVELQTK--LDGILQQFVEKMDDDFNTPDAITAVFE----WVSEANHLLQRDVVNQAEL- 393
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+++ + + +VLRI YSE + EL ++++ QLI ER AR
Sbjct: 394 --KAVLHTFHSMNKVLRI--------YSE----------PKEELLDDEIEQLIAERVEAR 433
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K K++ ++D+IR L KGI L D + WR
Sbjct: 434 KTKNWGRADEIRDLLAVKGIVLEDTAQGMRWR 465
>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 466
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 155/394 (39%), Positives = 208/394 (52%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV ++M+ I D + Q++ AY EGDV+F YG+LS Q ++
Sbjct: 104 LGCRKADLHPRVMENMDAIIDFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R+G R+ V +K + DFALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DI
Sbjct: 164 RSGARIRVGEKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P LR F++S HYR P+NYS L++ A + A S Q H + N
Sbjct: 284 HDPQLLRFFMLSVHYRHPINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTN 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+D + + R F M DD NT++ ++ F D K N L K
Sbjct: 336 LTEDDDQWLEKVEEHRKAFEEAMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVI 392
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ IE +I + +LG +L EL ++++ LIE+R
Sbjct: 393 TAFIEMFDRI-------VSVLGF----------------SLGEQELLDQEIEDLIEKRNE 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 430 ARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWK 463
>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 466
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/394 (40%), Positives = 216/394 (54%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++++ I + I +I+ AY V+GDV++ K YG+LS Q ++
Sbjct: 105 LGCKKADIHPRVTENIDAIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDEL 164
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+AG R+ + +K +P DFALWKAAK GE WDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 165 QAGARIEIGEKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDI 224
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A YW+HNG++ NNEKMSKSLGNF + I
Sbjct: 225 HAGGQDLTFPHHENEIAQSEALTGKPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIRE 284
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P LR F++S HYR P+NYS L+SA + L+ + A S Q H A N
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESAR-------RGLERLKTAYSNLQ-HRLQASTN 336
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
D I +R F M DD NT++ + F+ A K N L Q K
Sbjct: 337 LTDNDEEWVSRIADIRASFIREMDDDFNTANGIAVLFELA-KQANLYL------QEKTTS 389
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+I + + E +++ +LGL LK+ EL +E++ LI++R
Sbjct: 390 EKVIHAFLR---EFEQLADVLGL----------------TLKQDELLDEEIEALIQKRNE 430
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF+ +D+IR +L K I L D + T W+
Sbjct: 431 ARKNRDFALADRIRDELRAKNIILEDTPQGTRWK 464
>gi|381208309|ref|ZP_09915380.1| cysteinyl-tRNA synthetase [Lentibacillus sp. Grbi]
Length = 470
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 222/396 (56%), Gaps = 33/396 (8%)
Query: 1 MADLQCL---PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSG 57
++D++ L TY PRV++ M+ I I+ +I+ AY V+GDV+F +YG+LS
Sbjct: 98 LSDVEALGVKKATYNPRVTETMDDIIRFISNLISKGYAYEVDGDVYFKPRSFDDYGKLSH 157
Query: 58 QRLENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
Q ++ R+G R+ V +K +P DFALWK AK E +WDSPWG GRPGWHIECSAM+ YL
Sbjct: 158 QSIDELRSGARIQVGEKKEDPLDFALWKKAKDDEIAWDSPWGQGRPGWHIECSAMAKKYL 217
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
DIH GG DL FPHHENEIAQS A + +YWMHNG++ +NEKMSKSLGNF
Sbjct: 218 GETIDIHAGGQDLTFPHHENEIAQSEAMTEKPFANYWMHNGYINIDNEKMSKSLGNFVLT 277
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
+ I ++ P +R F++S HYR+P+N++ L A +++ I + E Q
Sbjct: 278 KDIISQHDPQVIRFFMLSVHYRNPINFTEELLQGAKNSLDRIKNAWTNLE---HRSQSSM 334
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNM-LKKKQPKQ 296
+ A + I++L ++F A M DD NT++ ++ F+ + N+ L++KQ
Sbjct: 335 DLTDKSNAWLEKISQLHNQFEAAMDDDFNTANAISVLFE-----LTKEANVYLEEKQTDT 389
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+R + + VL +LG+ + L +ED+ L++ R
Sbjct: 390 H------VIRAFQESMNTVLDVLGI---------------RMETEEPLLDEDIEALLKAR 428
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKN+DF ++D+IR L K I L D + T W+
Sbjct: 429 TEARKNRDFGRADEIRDALKGKNIILEDTPQGTRWK 464
>gi|375102829|ref|ZP_09749092.1| cysteinyl-tRNA synthetase [Saccharomonospora cyanea NA-134]
gi|374663561|gb|EHR63439.1| cysteinyl-tRNA synthetase [Saccharomonospora cyanea NA-134]
Length = 459
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 216/390 (55%), Gaps = 36/390 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L CLPP+ PR + H+ Q+ ++I +++++ AY EGDV+F+V +YG LSGQRL+
Sbjct: 102 AALGCLPPSATPRATGHITQMIELIQRLVDSGHAYAAEGDVYFSVASFDDYGALSGQRLD 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ + GE A KR+ DF LWK +K GEPSW +PWGPGRPGWH+ECSAM+ YL S+F
Sbjct: 162 DVQQGETQA--EGKRDHRDFTLWKGSKPGEPSWPTPWGPGRPGWHLECSAMATAYLGSEF 219
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG+DL+FPHHENE AQS AA D YW+HN VT + EKMSKSLGN I ++
Sbjct: 220 DIHGGGVDLVFPHHENERAQSLAAG-DGFARYWLHNAWVTMSGEKMSKSLGNVVAIPEML 278
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTAR 241
R+ + LR +LI HYRS + YS L ++ I Q L+
Sbjct: 279 RRWRAVELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLRRVRTV------------ 326
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+ E + ++ EF A + DDL T + ++ N++L+ + L +
Sbjct: 327 ---SGEVRVGRVPAEFAAALDDDLGTPQAFA-VLHNTVRDGNAALD----ASDDTKALEV 378
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
ES+R + + +LG+ P + +Q ++A E + V ++E R AR
Sbjct: 379 AESVRAMVD-------VLGIDP------LSEQWAERAGTETEALTKLVDTMLERRQQARA 425
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+DF+ +D IR LT GIA+ D W
Sbjct: 426 ERDFATADTIRDQLTEAGIAVEDTPNGPSW 455
>gi|421502280|ref|ZP_15949235.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
gi|400347127|gb|EJO95482.1| cysteinyl-tRNA ligase [Pseudomonas mendocina DLHK]
Length = 461
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 218/396 (55%), Gaps = 44/396 (11%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 102 ARLSVLRPDIEPRATGHIAGMHQMIQTLIDKGYAYAPGNGDVYYRVTKFETYGKLSRRKI 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ + G R+ VD K +P DF LWK AK GEPSWDSPWG GRPGWHIECS MS L
Sbjct: 162 DELKIGARIEVDEIKEDPLDFVLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGET 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 222 FDIHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ A
Sbjct: 282 LEKYHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEA----------- 330
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA + + F A M DD N+ F+ + +N L++ S
Sbjct: 331 --APAGGET---YVERFGAAMDDDFNSPEACAVLFE-----MIREVNRLRE--------S 372
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA----ELTEEDVLQLIEER 356
+++ + ++K++ +LG+L QL+ +A +A ++ +V LI R
Sbjct: 373 DVQAAAGLAAQLKQLASVLGVL----------QLEPEAFLQAGAAGKVDAAEVEALIAAR 422
Query: 357 AAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +K++++SD+IR LT G+ L D T WR
Sbjct: 423 LQARADKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
>gi|339487907|ref|YP_004702435.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|431802924|ref|YP_007229827.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
gi|338838750|gb|AEJ13555.1| cysteinyl-tRNA synthetase [Pseudomonas putida S16]
gi|430793689|gb|AGA73884.1| cysteinyl-tRNA ligase [Pseudomonas putida HB3267]
Length = 460
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/393 (39%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L LPP +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++E+
Sbjct: 103 LNILPPDQEPRATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIED 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
R G R+ VD K++P DF LWK K GEPSW+SPWGPGRPGWHIECS MS L FD
Sbjct: 163 LRIGARIEVDEAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQS AA + WMH G + N EKMSKSL NFFTIR + E
Sbjct: 223 IHGGGSDLEFPHHENEIAQSEAATGKQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+YHP +R+ L+++HYRS +NYS L A A+ Y L+ G
Sbjct: 283 KYHPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALR------------GLPRVA 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + + F M+DD T F D ++ IN + + S +
Sbjct: 331 AKGGEEFVER----FSVAMNDDFGTPEACAVLF-DLVREIN------------RLRESDV 373
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALK---RAELTEEDVLQLIEERAAA 359
E+ + ++E+ +LG VLQ D L+ ++ +V LI+ R A
Sbjct: 374 EAAAGLAGRLRELGDVLG---------VLQLEADDFLRAGAEGKVDAAEVEGLIQARLQA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K++++SD+IR LT G+ L D T WR
Sbjct: 425 RADKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 457
>gi|444349739|ref|ZP_21157091.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443543976|gb|ELT54067.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 435
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 79 LNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 138
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 139 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 198
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 199 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 258
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 259 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAF--------- 309
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 310 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 350
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R +
Sbjct: 351 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNES 400
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R LT GI L D T WR
Sbjct: 401 RATKDWAAADAARNALTEMGIILEDGPNGTTWR 433
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1.2|SYC_VIBVU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 221/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + ++++I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V++ KR P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVETAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ + + +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F D + IN + K + L+ +L
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGA 382
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ E+ +V+ IL P A+ LK A E+ E + LI+ R +R KD++
Sbjct: 383 LMRELADVIGILH-QDPDAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R L GI L D + T WR
Sbjct: 434 ADMARDKLNEMGIVLEDGPEGTTWR 458
>gi|419706820|ref|ZP_14234329.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
gi|383283455|gb|EIC81410.1| Cysteinyl-tRNA synthetase [Streptococcus salivarius PS4]
Length = 447
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 209/393 (53%), Gaps = 52/393 (13%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L P T PRV ++M++I ++ +++ AYV EGDV+F V KS NY +L+ + LE
Sbjct: 101 AQLGIKPATQNPRVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSKNYAKLANKTLE 160
Query: 62 N---NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLS 118
+ +G A +RK NP DFALWK AK GE SWDSPWGPGRPGWHIECS M+ L
Sbjct: 161 DLEIGASGRTDAETARKENPLDFALWKTAKEGEISWDSPWGPGRPGWHIECSVMATEILG 220
Query: 119 SKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIR 178
DIHGGG DL FPHH NEIAQS A + +YWMHNG V +NEKMSKSLGNF T+
Sbjct: 221 DTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVH 280
Query: 179 QITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGK 238
+ + LR FL + YR P+N++ + + D EV L +
Sbjct: 281 DMLKTVDGQVLRFFLATQQYRKPINFT--------------EKAIHDAEVNLKYLKNTHS 326
Query: 239 TARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+ + + D F M DD NT++ +T F D K+INS
Sbjct: 327 LPLTDQVDQAELQTYLDAFQEAMDDDFNTANGVTVLF-DMAKWINSG------------- 372
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ +++ +++L++ G++ + E+ +ED+ +LIEER A
Sbjct: 373 ----HYDQTVKDAFEKMLQVFGIVF-----------------KEEVLDEDIEKLIEERQA 411
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AR NKDF +D+IR +L +GI L+D W
Sbjct: 412 ARANKDFVTADRIRDELAAQGIKLLDTKDGVRW 444
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 220/387 (56%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I AYV GDV F V+K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VDS KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLAHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLTAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ + + F M+DD NT + F+ A +N +K + IE
Sbjct: 337 EYVTR----FSTAMNDDFNTPEAYSVLFEMA-----RDINRIKTES--------IEKASA 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ I+G+L P A+ + D A E+ E + LI+ R +R +KD+
Sbjct: 380 LGALMRELADIIGILHQDPEAFLK-----GDAAGNDDEVAE--IEALIKLRNDSRASKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ANADLARDKLNELGIVLEDGPEGTTWR 459
>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 474
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/389 (40%), Positives = 214/389 (55%), Gaps = 31/389 (7%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P T PRV++ +++I I +I+ AY G V+F P YG+LS Q E+ RAG
Sbjct: 108 PATVHPRVTECVDEIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGY 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ V K +P DFALWKAAK GE W SPWGPGRPGWHIECS M+ YL + DIH GG
Sbjct: 168 RIEVQDEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DLIFPHHENEIAQS A + YW+HNG + N EKMSKS GNF R + ER P
Sbjct: 228 RDLIFPHHENEIAQSEAHSGKTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERRDPR 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEHGKTARINP 244
A+R FL+SAHYR+PLNY+ LD A A+ I + ++D + AL + A P
Sbjct: 288 AVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRADEVP 347
Query: 245 A--AEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+ + ++R F M DD NT+ + F D ++ +N+ L ++ +
Sbjct: 348 STRGRSDVEQIRSAFIQAMDDDFNTADGMAAIF-DGVRVVNTRL---------EEGGVTL 397
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LR + E+L +LG+ K E E+++ +LI ERA ARK
Sbjct: 398 GDLRLYRDLFVELLGVLGI----------------PKKEEERLEDEIERLIAERAEARKR 441
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIW 391
+DF+++D+IR L +GI L D T W
Sbjct: 442 RDFARADEIRDQLRHRGIVLEDTPYGTRW 470
>gi|392538778|ref|ZP_10285915.1| cysteinyl-tRNA ligase [Pseudoalteromonas marina mano4]
Length = 459
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM +I +M+ ++I AYV +GDV F V YG LS Q L
Sbjct: 103 LNMLRPDVEPTVTGHMGEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV V K +P DF LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQSGSRVEVAQDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSL NFFT+R + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P ++R+FLIS HYRS LNYS LD A ++ IY L+D + P +
Sbjct: 283 EYDPESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRD----VKPIE-------- 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
E N+ +F M DD NT L F+ + LN +K+ Q QL+
Sbjct: 331 ---CELESNEFVIKFRKAMDDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAF 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I ++ + +LG V QQ + L+ + E + LI +R A
Sbjct: 383 I---------LRTIGEVLG---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +KD++ +D+ R L G+ L D +T WR
Sbjct: 425 RASKDWAAADEARDALNALGVILEDSAGKTTWR 457
>gi|390568854|ref|ZP_10249146.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|420252649|ref|ZP_14755752.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
gi|389939203|gb|EIN01040.1| cysteinyl-tRNA ligase [Burkholderia terrae BS001]
gi|398054156|gb|EJL46292.1| cysteinyl-tRNA synthetase [Burkholderia sp. BT03]
Length = 465
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/391 (42%), Positives = 217/391 (55%), Gaps = 44/391 (11%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR +D + Q+ MI ++ N AY +GDV +AV K NYG LSG+ LE+ RAGE
Sbjct: 110 PDLEPRATDFIPQMLGMIEKLEQNGYAYQAADGDVNYAVRKFANYGALSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK +K EP+ WDS +G GRPGWHIECSAM L FDIH
Sbjct: 170 RVAANDAKQDPLDFVLWKQSKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + + V+YWMHNG+V +NEKMSKSLGNFFTIR++ +Y
Sbjct: 230 GGGQDLQFPHHENEIAQSEGATRQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLAKY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F+ AHYRSPLNYS LD A A+ +Y L+D + A+
Sbjct: 290 DAEVVRFFIARAHYRSPLNYSDTHLDDARSALARLYTALKDTPPGAGEIDWNEAHAQ--- 346
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
F A M+DD NT ++ F+ + S +N + +Q L
Sbjct: 347 -----------RFRAAMNDDFNTPVAVSVLFE-----LASEVNRTRDAALARQLHGLA-- 388
Query: 305 LRKIENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
R+LGLL P AY LQQ + A L + I R AA++
Sbjct: 389 ------------RVLGLLRREPRAY---LQQAAGSESEGA-LDVAAIEVKIAARVAAKQA 432
Query: 363 KDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
KD++++D+IR +L GIAL D G T WR
Sbjct: 433 KDYAEADRIRKELLDAGIALEDKPGGLTEWR 463
>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 465
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 223/391 (57%), Gaps = 33/391 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV+++M+ I + I +++ + AY EGDV++ K YG+LS Q ++
Sbjct: 104 LGCKHADVHPRVTENMDIIIEFIDELVKKEYAYESEGDVYYRTRKFEGYGKLSHQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
++G R+ V +K +P DF LWKA K GE +WDSPWG GRPGWHIECSAM+ YL DI
Sbjct: 164 QSGARIEVGEKKEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A S YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLAFPHHENEIAQSEALTGKSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P LR F++S HYR P+NY+ L++ ++ LQ L+ E T
Sbjct: 284 HDPSLLRFFILSVHYRHPINYNEEILENTRKG----FERLQTAYGNLTHRLE-AATNLQE 338
Query: 244 PAAE--DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
A+E + + +LR+ F M DD NT++ ++ F+ A + ++L +L++ +
Sbjct: 339 DASEWFEKLKELRETFVEEMDDDFNTANAISVLFELAKQ---ANLYLLEQTTST----DV 391
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
IE+ K E KE+ +G+ AEL +E++ QLI++R ARK
Sbjct: 392 IEAFIK---EFKELGTAIGI----------------TFGEAELLDEEIDQLIQDRIQARK 432
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
+++F +DQIR +L K I L D + T W+
Sbjct: 433 DRNFQLADQIRDELKAKNIILEDTAQGTRWK 463
>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229558793|sp|B2V6B4.1|SYC_SULSY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 487
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 223/390 (57%), Gaps = 17/390 (4%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PRV+ H+ I + I ++++ AY +GDV+F+V K YG+LS + ++ AG
Sbjct: 108 PADIEPRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ +K++P DFALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG
Sbjct: 168 RIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
+DL FPHHENEIAQ+ A YW+HNG VT N +KMSKSLGN+ +++I +Y P
Sbjct: 228 LDLTFPHHENEIAQAEALTGKPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYSKYEPD 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAA 246
LR ++S HYRSPL++S +++ A + +++ EV P E+ + N
Sbjct: 288 ILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIDENFEGDLYN--- 344
Query: 247 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIES 304
I K + F++ MSDD NT L F + +N+L+ K K +S IES
Sbjct: 345 --AIQKAQSGFYSAMSDDFNTPEALASLFG-----LVREMNILRDKAIKHGGISKKAIES 397
Query: 305 LRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKN 362
++ + ++ R I GL + ++Q + K ++ E ED++Q LIE R ARK
Sbjct: 398 YKEAAKTLHDIGRDIFGLFD--SLQPCIKQEEVKVKEKEESINEDLIQVLIEAREKARKE 455
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K F+ +D IR L KGI L D T W+
Sbjct: 456 KQFTIADLIRDKLAEKGIILEDAPFGTKWK 485
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/393 (41%), Positives = 223/393 (56%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P ++PR + H+ +I D++ ++I AYV + GDV F VE +YG+LS Q LE
Sbjct: 113 LNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQ 172
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG R+ ++ K+NP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L FD
Sbjct: 173 LQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFD 232
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A + V+YW+H+G + + EKMSKSLGNFFTIR +
Sbjct: 233 IHGGGSDLMFPHHENEIAQSCCAHGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN 292
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y ++R+FL++AHYRS LNYS L+ A A+ +Y L+ + + F
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAF--------- 343
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
E+ + D F M DD NT + L+ F+ A LN LK + +
Sbjct: 344 --GGENFV----DAFREAMDDDFNTPNALSVLFEMA-----RELNKLKTED--------M 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ---LIEERAAA 359
+ ++E+ ILGLL QL + +A E++V + LI++R A
Sbjct: 385 AKANGLAARLRELAAILGLL----------QLDPEQFLQAGSDEDEVAKIEALIKQRNEA 434
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R KD++ +D R T+ GI L D T WR
Sbjct: 435 RTAKDWAAADAARNASTKMGIILEDGPNGTTWR 467
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1.1|SYC_YERPY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I +M ++I AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F I +N LK + + +
Sbjct: 336 ---VEFEARFRTAMDDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANG 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D + + E LI++R AR +KD+
Sbjct: 380 LAAELRKLAQVLGLLEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADAARDQLNDLGIVLEDGPQGTTWR 459
>gi|399018068|ref|ZP_10720254.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
gi|398102033|gb|EJL92225.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
Length = 465
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 228/396 (57%), Gaps = 40/396 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRL 60
A L P ++PR + ++ Q+ D+I + NN AY +GDV ++V P YG+LSG+ L
Sbjct: 103 AALGVQKPDHEPRATAYVPQMLDLIRTLQNNGLAYQGSDGDVNYSVRDFPGYGKLSGKSL 162
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYL 117
++ RAGERV V++ KR+P DF LWKAAK EP+ WDSPWG GRPGWHIECSAM+ L
Sbjct: 163 DDLRAGERVDVNTGKRDPLDFVLWKAAKESEPAEVKWDSPWGKGRPGWHIECSAMANDLL 222
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
FDIHGGG DL FPHHENEIAQS A Q V+YWMHNG V +NEKMSKSLGNFFTI
Sbjct: 223 GDHFDIHGGGQDLQFPHHENEIAQSEGAHQHGFVNYWMHNGFVRVDNEKMSKSLGNFFTI 282
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R + ++Y P +R F++ AHYRSPLNYS LD A A+ Y L+D V + ++
Sbjct: 283 RDVLKKYDPEVVRFFILRAHYRSPLNYSDAHLDDARQALTRFYTALKDVAVDDAVAVDYA 342
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
+ + LR F M+DD NT + F D IN K K P Q
Sbjct: 343 EA-----------HALR--FAEAMNDDFNTPVAIAVLF-DLANEIN------KTKSPAQA 382
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
+ ++K + ++GLL A + ++ A L+E D+ I R
Sbjct: 383 R------------QLKALAGVIGLLQRPADDFLKARVGSDA---DGLSEADIEARIAARV 427
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
AA+K K+F+++D IRA+L G+ L D G T WR
Sbjct: 428 AAKKAKNFAEADGIRAELAAAGVILEDKPGGLTEWR 463
>gi|374314065|ref|YP_005060494.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
gi|363988291|gb|AEW44482.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
Length = 461
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/387 (40%), Positives = 213/387 (55%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+++I ++ ++I+ + AY+ GD+ F++ P YG LS Q LE + G
Sbjct: 108 PNKEPRATQHIDEIINITQRLIDRNHAYIASNGDIMFSINSDPRYGLLSHQALEQLQLGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV ++ KRNP DF LWK +K GEP W SPWG GRPGWHIECSAM+ FDIHGGG
Sbjct: 168 RVKINHVKRNPMDFVLWKLSKPGEPCWQSPWGAGRPGWHIECSAMNYKQFGPHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DLIFPHHENEIAQS A V+YWMH+G V EKMSKSL NF TIR I Y+
Sbjct: 228 ADLIFPHHENEIAQSRCAHDSQYVNYWMHSGMVMVEKEKMSKSLNNFLTIRNILSYYNGE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S+HYRSPLNYS L A+ ++ +Y L+ + P +
Sbjct: 288 TIRYFLMSSHYRSPLNYSEKNLKQANLSLERLYMALRGTDTNDYPVKG------------ 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+F M DDLNT + F A ++N LK K + + +
Sbjct: 336 ---GIFEYQFQQAMDDDLNTPAAYSVLFNMA-----HTINSLKSKN--------MIAANR 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
I ++++ ++LGLL P + + Q+KD +R + E LI++R ARKNK++
Sbjct: 380 IATTLRKLAKVLGLLQQQPEDFLQYKTQIKDS--ERVTIEE-----LIKQRNKARKNKNW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+D R L + I L D K T WR
Sbjct: 433 IIADAARDQLKKMNIILEDSSKGTTWR 459
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 220/389 (56%), Gaps = 40/389 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR +D + Q+ MI ++ AY +GDV +AV K YG+LSG+ LE+ RAGE
Sbjct: 124 PDMEPRATDFIPQMLGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGE 183
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K +P DF LWK +KA EP+ WDS +G GRPGWHIECSAM L +FDIH
Sbjct: 184 RVAANDAKEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIH 243
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS AA V+YWMHNG+V +NEKMSKSL NFFTIR++ +Y
Sbjct: 244 GGGQDLQFPHHENEIAQSEAATGQPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQY 303
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
+R F+ AHYRSPLNYS + +D A +A+ +Y L+D ++P +
Sbjct: 304 DAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALKD----VTP----------DG 349
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
AA D F A M+DD NT ++ F+ L + + + +L
Sbjct: 350 AALDWNEAHAQRFQAAMNDDFNTPVAVSVLFE------------LATEVNRTRDPALARQ 397
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
LR + VL +LG P + AL+ A + + I ER AA++ KD
Sbjct: 398 LRSL----GAVLGLLGREPRAYLQQAAGAAVQGALEPAAIEAK-----IAERVAAKQAKD 448
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
++ +D+IRA+L G+AL D G T WR
Sbjct: 449 YAAADRIRAELLEAGVALEDKPGGLTEWR 477
>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
gi|225203279|gb|EEG85633.1| cysteine--tRNA ligase [Proteus penneri ATCC 35198]
Length = 463
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 213/390 (54%), Gaps = 33/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + H+ +I ++ +I AYV + GDV FA++ P+YG LS Q LE
Sbjct: 103 LNIARPDSEPRATHHIAEIIELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V + KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L FD
Sbjct: 163 LQAGARVEVANVKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ +Y +L+ + P A
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDENAQPVGGEAFEA-- 340
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
+F M+DD NT + F + +N LK L
Sbjct: 341 -------------QFIDAMNDDFNTPEAYSVLFD-----LAREVNRLKAVDMNAAN-GLA 381
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LRK+ ++LGLL E Q KA +E+ E + LI++R ARKN
Sbjct: 382 AVLRKLA-------KVLGLLEQE--PEHFLQSGAKADDASEV--EKIELLIQQRNDARKN 430
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KD++ +D R LT GI L D + T+WR
Sbjct: 431 KDWAAADVARDALTAMGIVLEDGPQGTVWR 460
>gi|359449072|ref|ZP_09238573.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
gi|358045104|dbj|GAA74822.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. BSi20480]
Length = 459
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 213/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM +I +M+ ++I AYV +GDV F V YG LS Q L
Sbjct: 103 LNMLRPDVEPTVTGHMGEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV V K +P DF LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQSGARVEVAQDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSL NFFT+R + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P ++R+FLIS HYRS LNYS LD A ++ IY L+D + P +
Sbjct: 283 EYDPESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRD----VKPIE-------- 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
E N+ +F M DD NT L F+ + LN +K+ Q QL+
Sbjct: 331 ---CELESNEFVIKFRKAMDDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAF 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I ++ + +LG V QQ + L+ + E + LI +R A
Sbjct: 383 I---------LRTIGEVLG---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNEA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +KD++ +D+ R L G+ L D +T WR
Sbjct: 425 RASKDWAAADEARDALNALGVILEDSAGKTTWR 457
>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas protegens Pf-5]
gi|109894922|sp|Q4K9S1.1|SYC_PSEF5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68345570|gb|AAY93176.1| cysteine--tRNA ligase [Pseudomonas protegens Pf-5]
Length = 460
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 216/392 (55%), Gaps = 36/392 (9%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L P +PR +DH+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 101 ARLNIKKPDMEPRATDHIPGMHTMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKI 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ R G R+ VD K++P DF LWKAAK GEPSW SPWG GRPGWHIECS MS L
Sbjct: 161 EDLRIGARIEVDESKQDPLDFVLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGET 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL FPHHENEIAQS AA + + WMH G + N EKMSKSL NFFTIR +
Sbjct: 221 FDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDV 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
++YHP +R+ L+++HYRS +NYS L A A+ Y L+
Sbjct: 281 LDKYHPEVVRYLLVASHYRSAINYSEDNLKDAKGALERFYHALKGL-------------P 327
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
++ PA + + F M+DD T F+ + +N L++ S
Sbjct: 328 KVAPAGGEA---FVERFTQVMNDDFGTPEACAVLFE-----MVREINRLRE--------S 371
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I++ + +KE+ +LG+L A + LQ + + A+ V LI+ R AAR
Sbjct: 372 DIDAAAGLAARLKELASVLGVLQLEA-DDFLQAGAEGRVDGAQ-----VEALIQARLAAR 425
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
NKD+++SD+IR +T G+ L D T WR
Sbjct: 426 ANKDWAESDRIRDQITAMGVILEDGKGGTTWR 457
>gi|254514497|ref|ZP_05126558.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
gi|219676740|gb|EED33105.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
Length = 462
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 162/404 (40%), Positives = 210/404 (51%), Gaps = 60/404 (14%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLE 61
A L LPPT +P +D++ + + +I + AY EG V F V +YG+LSG+ L+
Sbjct: 102 AQLNALPPTLEPHATDNIGPMIALTESLIERNHAYAAEGHVLFDVTSMKDYGQLSGRSLD 161
Query: 62 NNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKF 121
+ AG RV V KR+P DF LWK + A EP W+SPWG RPGWH+ECSAM +L
Sbjct: 162 DMLAGARVEVAGYKRHPGDFVLWKPSSADEPGWESPWGRVRPGWHLECSAMIREHLGPTI 221
Query: 122 DIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT 181
DIHGGG DLIFPHHENE+AQSC A D V WMHN + + EKMSKSLGN TIR++
Sbjct: 222 DIHGGGRDLIFPHHENELAQSCCAFGDEFVRVWMHNAFLDMDGEKMSKSLGNVATIRELL 281
Query: 182 ERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQ-------DCEVALSPFQ 234
RY LR L+SAHYRSPLN+S L+ A + Y TL+ DCEV+L
Sbjct: 282 TRYRGEVLRFALLSAHYRSPLNFSEALLEQAEQTLTSFYNTLRSVQGIELDCEVSLEG-- 339
Query: 235 EHGKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQP 294
+ F+A + DDLNT + S L++L +
Sbjct: 340 --------------------EGFYAALCDDLNTPLAI------------SELHVLAR--- 364
Query: 295 KQQQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQ------LKDKALKRAELTEED 348
+ K K L+ LL G +LQQ D A L E
Sbjct: 365 ---------DINKASGSDKPALKAR-LLAAGNLLGILQQDPLEWLQGDGASDLQGLDAEA 414
Query: 349 VLQLIEERAAARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
V LI ER AA+ N+D++++D+IR +LT GI L D T+WR
Sbjct: 415 VEALIAERVAAKANRDYARADEIRDELTAGGIILEDSAGGTLWR 458
>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868556|ref|YP_005700025.1| cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 461
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 212/394 (53%), Gaps = 42/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L P +PR + H+ +I ++ Q+I D AYV GDV FAV+ P+YG LS Q LE
Sbjct: 103 LNIARPDVEPRATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW SPWG GRPGWHIECSAM+ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A + V+YWMH+G V + EKMSKSLGNFFTIR +
Sbjct: 223 IHGGGSDLMFPHHENEIAQSTCAHDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNYS L A A+ +Y L+ + A P + TAR
Sbjct: 283 HYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTAR- 341
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
F A M DD NT + F A +N LK + Q
Sbjct: 342 --------------FRAAMDDDFNTPEAYSVLFDMA-----REINRLKGEDMAQAS---- 378
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED----VLQLIEERAA 358
+ +++ + +LGL L+Q + L+ +D + LI++R
Sbjct: 379 ----ALAAQMRGLAHVLGL---------LEQTPEHFLQSGAAAGDDEVAQIEALIKQRND 425
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K ++ +D+ R L GI L D + T WR
Sbjct: 426 ARAAKAWALADEARDSLNAMGIVLEDGPQGTTWR 459
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 218/399 (54%), Gaps = 52/399 (13%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLEN 62
L LP T PR ++++ Q+ +I + + D AY +GDV +AV PNYGRLSG+ L++
Sbjct: 105 LGILPATLVPRATEYVPQMLALIETLESKDLAYQGSDGDVNYAVRNFPNYGRLSGKSLDD 164
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSS 119
RAGERV V++ KR+P DF LWKA+K EP WDS WG GRPGWHIECSAM + L
Sbjct: 165 LRAGERVDVNTGKRDPLDFVLWKASKESEPDEVKWDSKWGKGRPGWHIECSAMCSALLGE 224
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A + V+YW+HNG V +NEKMSKSLGNFFTIR
Sbjct: 225 HFDIHGGGADLQFPHHENEIAQSEGAFGRTMVNYWVHNGFVRVDNEKMSKSLGNFFTIRD 284
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCE---VALSPFQEH 236
+ ++Y +R F++ AHYRSPLNYS LD A A+ +Y L E +AL + H
Sbjct: 285 VLKKYDAEVVRFFILRAHYRSPLNYSDAHLDDARVALTRLYTALDGVEGDGLALDWQEPH 344
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
F M DD NT L F + S LN K K P
Sbjct: 345 AA-----------------RFAEAMDDDFNTPVALAVLFD-----LVSELN--KSKSP-- 378
Query: 297 QQLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEER 356
+ ++K + ++GLL + Q+ + A+ + T+ D
Sbjct: 379 ----------AVARQLKALAGVIGLL-----ARTPQEFRQAAVGETD-TDGDAAIAARIA 422
Query: 357 AA--ARKNKDFSKSDQIRADLTRKGIALMDMGKETI-WR 392
A+K ++F++SD+IRADL GI L D T WR
Sbjct: 423 QRIEAKKARNFAESDKIRADLLTAGIILEDKPDGTTNWR 461
>gi|395235526|ref|ZP_10413735.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
gi|394729760|gb|EJF29694.1| cysteinyl-tRNA synthetase [Enterobacter sp. Ag1]
Length = 461
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I +++ Q++ D AYV E GDV F+V PNYG LS Q L+ +AG
Sbjct: 108 PNSEPRATKHIPEIIEIVEQLLARDHAYVAENGDVMFSVLTDPNYGLLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEP+W SPWG GRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVDVVDVKRNPMDFVLWKMSKPGEPAWTSPWGEGRPGWHIECSAMNCKELGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+ WMH+G V + EKMSKSLGNFFT+R + + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGEYVNTWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A A+ +Y +L+ + +++P AR
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGTDSSVAPAGGEAFEAR------ 341
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
F M DD NT + F A +N LK +
Sbjct: 342 ---------FREAMDDDFNTPEAYSVLFDMA-----REVNRLKAEDLAAANGL------- 380
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
++++ ILGLL P + + Q D + E LI++R AR++KD+
Sbjct: 381 -AAALRKLSAILGLLEQDPEQFLQGGAQADDGEVAEIE-------ALIKQRNDARQSKDW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +DQ R L GI L D T WR
Sbjct: 433 ALADQARDRLNEMGIVLEDGAGGTTWR 459
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 221/387 (57%), Gaps = 39/387 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++ + +I +++ ++I AYV GDV F V+K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV VDS KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLNHYDSE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA- 246
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ PAA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLT-------------TPAAG 334
Query: 247 -EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
E+ +++ F M+DD NT + F D + IN + K + ++ +L
Sbjct: 335 GEEYVSR----FTEAMNDDFNTPEAYSVLF-DMAREIN---------RIKAEDIAAASAL 380
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E+ +V+ IL Y + LK A E+ E + LI+ R +R +KD+
Sbjct: 381 GSLMRELADVIGIL-------YQDPEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDW 431
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 432 ANADLARDKLNEMGIVLEDGPEGTTWR 458
>gi|428301159|ref|YP_007139465.1| cysteinyl-tRNA synthetase [Calothrix sp. PCC 6303]
gi|428237703|gb|AFZ03493.1| cysteinyl-tRNA synthetase [Calothrix sp. PCC 6303]
Length = 488
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 229/394 (58%), Gaps = 35/394 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PR ++H++ I+D+I +++ D AY GDV++ VEK P YG+LSG+ L + +AG V+
Sbjct: 113 PRATEHIQDIQDLIQILVDKDLAYSAGGDVYYRVEKFPTYGKLSGRNLSDMQAGASGRVE 172
Query: 73 ------SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGG 126
++K+ P DFALWK AK GEP+WDSPWG GRPGWHIECSAM L DIHGG
Sbjct: 173 AETSENTKKQYPLDFALWKGAKPGEPAWDSPWGQGRPGWHIECSAMIRSRLGETIDIHGG 232
Query: 127 GIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQIT----E 182
G DL+FPHHENEIAQS A YW HNG V + +KMSKSLGNF TIR++ E
Sbjct: 233 GGDLVFPHHENEIAQSEGAINKPLARYWTHNGMVMVDGQKMSKSLGNFITIRELLDGKWE 292
Query: 183 RY----HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH-G 237
+Y HP+A+R F++ AHYR PL+++ + S+ ++ ++TLQ+ V F E G
Sbjct: 293 KYPEPVHPMAVRLFVLQAHYRKPLDFTEDAIASSVNS----WKTLQEGLVFGEQFGEKLG 348
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T N ++ I + F + DD N S L F+ A + ++ + + K
Sbjct: 349 FTEDGNQLDKNLIER----FESFGDDDFNFSGSLAVLFELAKELRREGNILVHEGKTKTN 404
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L ++ + + ++LGL L+ ++D + A ++ D+ LIE+R
Sbjct: 405 TAELQQAWYTLVT----LAQVLGLEAK------LEAVEDNS--SAGFSDADIETLIEQRN 452
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AARK+KDF++SD+IR L +G+ L+D + T W
Sbjct: 453 AARKSKDFAESDRIRNQLQAQGVTLIDSKEGTRW 486
>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 459
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/390 (41%), Positives = 215/390 (55%), Gaps = 36/390 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+ +I ++ +++ AYV E GDV F VE YG LS Q LE
Sbjct: 103 LNILRPDVEPRATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV + S KRNP DF LWK +K EPSWDSPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEIKSVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQSC A D V+YW+H G +T N EKMSKSL NFFTIR I
Sbjct: 223 IHGGGSDLMFPHHENEIAQSCCAHGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDILN 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
+Y ++R+F ++A YRS L+YS + A A+ +Y L+ C+ +
Sbjct: 283 KYDCESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVE----------- 331
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
AE+ ++ F M DD NT L F+ A +N LK + +
Sbjct: 332 --LAEN--DQYVTAFKESMDDDFNTPGALAVLFELA-----REINKLKAENQVEAN---- 378
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
K+ +K++ +LGLL E Q + AE+ LI++R AR +
Sbjct: 379 ----KLAARLKQLAGVLGLLEQD--PETFLQGDANNDEVAEIE-----ALIKQRNEARAS 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D+ R LT GI L D T WR
Sbjct: 428 KNWAVADEARNKLTAMGIVLEDGANGTTWR 457
>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189082064|sp|B0U0I3.1|SYC_FRAP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 459
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 216/390 (55%), Gaps = 35/390 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRLEN 62
L L PT +PR + + ++ MI ++ AY GDVF+ V K +YG+LS Q LE
Sbjct: 102 LNILRPTKEPRATQTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEA 161
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
G RV V K NP DF LWK AK GEP+WDSPWG GRPGWHIECSAMS L FD
Sbjct: 162 LEQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFD 221
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DL FPHHENEIAQS A + + +YW+H+G V N EKMSKSL NFFTI ++ E
Sbjct: 222 IHAGGSDLRFPHHENEIAQSEACNECTFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE 281
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
YHP +R+FL S YRS +NYS LD+A +V ++ L+D E +
Sbjct: 282 EYHPEVIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIE-------------PV 328
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
D ++ ++F M +D NT L F A K IN+ + K K L
Sbjct: 329 EVNLPDDASEYEEKFIKAMDNDFNTPEALAVLFSLA-KEINTLKTVNKYKASGYAFL--- 384
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKN 362
LRK+ +LG+L ++++ + K + + ++ +LI ER A+K+
Sbjct: 385 --LRKL-------CDVLGIL----FTDIEEYFK----QGDGIDVSEIEKLIAERTQAKKD 427
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++++D+IR DL +GI L D T W+
Sbjct: 428 KNYARADEIRNDLQNQGIILEDSATGTTWK 457
>gi|418481027|ref|ZP_13050077.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|384571373|gb|EIF01909.1| cysteinyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 460
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 222/387 (57%), Gaps = 39/387 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR ++++ +I +++ ++I AYV + GDV F + K +YG+LS Q LE +AG
Sbjct: 108 PDIEPRATEYIAEIIELVQKLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLEQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV ++S KR+ DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVEIESAKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y P
Sbjct: 228 SDLQFPHHENEIAQSCCAHGTDYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDPE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAA- 246
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ +++ PAA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLS-------------TPAAG 334
Query: 247 -EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESL 305
E+ + + F M+DD NT + F D + IN + K + ++ +L
Sbjct: 335 GEEYVKR----FTEAMNDDFNTPEAYSVLF-DMAREIN---------RVKTEDIATASAL 380
Query: 306 RKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E+ +V+ IL P LK + E+ E + LI+ R +R KD+
Sbjct: 381 GSLMRELADVIGILHQDPEAF-------LKGDSGSDDEVAE--IEALIKLRNDSRAAKDW 431
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R LT GI L D + T WR
Sbjct: 432 ANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|339006566|ref|ZP_08639141.1| cysteinyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|421875251|ref|ZP_16306845.1| cysteinyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
gi|338775775|gb|EGP35303.1| cysteinyl-tRNA ligase [Brevibacillus laterosporus LMG 15441]
gi|372455719|emb|CCF16394.1| cysteinyl-tRNA synthetase [Brevibacillus laterosporus GI-9]
Length = 468
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 216/393 (54%), Gaps = 29/393 (7%)
Query: 3 DLQ---CLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQR 59
DLQ LPP QPRV + + +I I +I AY EGDV+F + YG+LS Q
Sbjct: 100 DLQGVNVLPPDIQPRVMNTIPEIISFIEGLIEKGFAYESEGDVYFRTNRFNEYGKLSHQP 159
Query: 60 LENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSS 119
L++ +AG R+ V+ +K NP DFALWKAAK E SW+SPWG GRPGWHIECSAM+ +L
Sbjct: 160 LDDLQAGARIEVNEKKENPLDFALWKAAKPQEISWESPWGAGRPGWHIECSAMALRFLGE 219
Query: 120 KFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
DIH GG DL FPHHENEIAQS YWMHN + +NEKMSKSLGNF R
Sbjct: 220 SIDIHAGGTDLTFPHHENEIAQSECFTGKPFARYWMHNAMLNIDNEKMSKSLGNFLLARD 279
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ +Y +R F++S HYRSP+N+S L+ A++ + I + L+ +E
Sbjct: 280 LIAKYTGQLIRFFMLSGHYRSPINFSDEMLEQAANGLDRIKNAYVNLGHRLNTAREEEPN 339
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
A+ I LR F M DDLNT++ +T F I N+ +
Sbjct: 340 GLAQEQAQ-LIESLRKRFEEEMDDDLNTANGITVLFD-----IAKEANLYTRHD--NVGA 391
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
+ I++ R++ ++E+ +LGL +LQ+ A L +E++ LI ER A
Sbjct: 392 TEIKAYRQL---LEELSSVLGL--------ILQE-------EATLLDEEIELLIAERTEA 433
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
RK ++F++SD+IR L GI L D + WR
Sbjct: 434 RKARNFARSDEIRDQLQEMGIILEDTPQGIRWR 466
>gi|418621538|ref|ZP_13184307.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU123]
gi|374828769|gb|EHR92594.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU123]
Length = 466
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 218/384 (56%), Gaps = 33/384 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PRV HM +I D I ++++ AY +GDV+F + YG+LS Q L++
Sbjct: 103 LNVKKATSNPRVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDL 162
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ +K + DF LWK AK GE SW+SP+G GRPGWHIECS M+ H L S DI
Sbjct: 163 KVGARIEAGEQKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDI 222
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A +YWMHNG + +NEKMSKSLGNF + I +
Sbjct: 223 HAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKE 282
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
P LR F+IS HYRSP+NY++ + +A + I Y+ +++ E S +E +
Sbjct: 283 VDPDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYI 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ I+K+ ++F M DD NT++ +T A+ D K N + L
Sbjct: 343 Q-------HIDKILNQFETVMDDDFNTANAVT-AWYDLAKLANKYV------------LE 382
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
I S K+ N KEV I +S+VL + K+ + EL +ED+ QLIEER AR
Sbjct: 383 NITST-KVLNRFKEVYSI--------FSDVL-GVPLKSKETEELLDEDIEQLIEERNEAR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMD 384
KNKDF+++D+IR L + I L D
Sbjct: 433 KNKDFARADEIRDMLKARHIILED 456
>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
gi|167712594|gb|EDS23173.1| cysteine--tRNA ligase [Clostridium sp. SS2/1]
gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
Length = 467
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 220/394 (55%), Gaps = 31/394 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L P T+QPR ++ + + MI +I AY V+G V+F +YG+LS + +
Sbjct: 99 MEALNIKPATHQPRATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ AG R V + K +P DF LWK K GE +WDSPWG GRPGWHIECS MS Y+
Sbjct: 159 DDLEAGHREIKVTGEEGKEDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYI 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
DIH GG DLIFPHHENEIAQS A + +YWMHNG + NN+KMSKS GNFFT+
Sbjct: 219 GDTIDIHAGGEDLIFPHHENEIAQSEACNGEKFANYWMHNGFLNINNKKMSKSAGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y +R F++SAHYR+PLN+S ++SA + I + C +S +E G
Sbjct: 279 REIGEKYPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCR-EMSAKEETG 337
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
++ I L +F M DD NT+ ++ F+ ++++ +
Sbjct: 338 SLSKEETEHFANIEVLVKKFEDAMEDDFNTADAVSAIFE-----------IVRESNSTVK 386
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
S + +KI ++++ +LG+ + K E+ +E++ +LIEER
Sbjct: 387 DFSA-DYAKKILKVLEDLCSVLGI---------------ETTKEEEILDEEIEKLIEERQ 430
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AARKNKDF+++D+IR L +GI L D + W
Sbjct: 431 AARKNKDFARADEIRDQLLEQGIVLKDTREGVKW 464
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 220/387 (56%), Gaps = 39/387 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDIEPRATQFIPEIIELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L FDIHGGG
Sbjct: 168 RVDVETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLNAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F A +N LK + +E +
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLFDMA-----REVNRLKTEN--------LEKASE 379
Query: 308 IENEVKEVLRILGLL--PPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ ++E+ ++G+L P A+ LK A E+ E + LI+ R +R KD+
Sbjct: 380 LGALMRELADVIGILHQDPEAF------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDW 431
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R LT GI L D + T WR
Sbjct: 432 ANADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|397904926|ref|ZP_10505801.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
gi|397162020|emb|CCJ33135.1| Cysteinyl-tRNA synthetase [Caloramator australicus RC3]
Length = 467
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 215/389 (55%), Gaps = 27/389 (6%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L+ T PR ++ + +I + +++ AYVV+GDV+F K YG+LS Q +E+
Sbjct: 104 LKIKRATVNPRATEFIGEIIAFVKDLVDKGYAYVVDGDVYFDTTKFKEYGKLSHQSIEDL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
AG R+ +D RKRNP DFALWKA K GEP+W+SPWG GRPGWHIECS M+ L DI
Sbjct: 164 EAGARIEIDERKRNPMDFALWKAKKEGEPAWESPWGEGRPGWHIECSTMACSLLGETIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
HGGG DLIFPHHENEIAQS A +YWMH ++ NN+KMSKSL NFFT R+I E+
Sbjct: 224 HGGGADLIFPHHENEIAQSEARNGKPFANYWMHVAYLNVNNQKMSKSLNNFFTAREILEK 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
Y +R F++S HYR+P+N+S+ LD A A+ +Y + + E + ++ TA
Sbjct: 284 YDAEVVRLFMLSGHYRNPINFSIELLDQAKAALERLYNAIANLEHVIETSEDRELTAE-E 342
Query: 244 PAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIE 303
+ ++ R+ + M DD NT+ ++ F D ++ +N+++ K+ Q+ L LI
Sbjct: 343 LEFFNRLDSFRERYIEVMDDDFNTADGISVIF-DLVREVNTNIKEGSPKKLAQKALDLIR 401
Query: 304 SLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNK 363
L G+ +L++ +L + Q ARK K
Sbjct: 402 EL-------------------GSPLGILEKSTKGSLDEEIERLIEERQ------KARKEK 436
Query: 364 DFSKSDQIRADLTRKGIALMDMGKETIWR 392
+++ +D+IR L GI L D + W+
Sbjct: 437 NYALADKIRDQLKEMGIILEDTPQGVRWK 465
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5.2|SYC_VIBVY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 218/385 (56%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + ++++I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V++ KR P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDVETAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ + + +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F A M+DD NT + F D + IN + K + L+ +L
Sbjct: 337 EYVSR----FTAAMNDDFNTPEAYSVLF-DMAREIN---------RLKTEDLANASALGA 382
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ E+ +V+ IL P LK A E+ E + LI+ R +R KD++
Sbjct: 383 LMRELADVIGILHQDPEAF-------LKGDAGNDDEVAE--IEALIKLRNDSRAAKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R L GI L D T WR
Sbjct: 434 ADMARDKLNEMGIVLEDGPDGTTWR 458
>gi|375265152|ref|YP_005022595.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
gi|369840473|gb|AEX21617.1| cysteinyl-tRNA synthetase [Vibrio sp. EJY3]
Length = 460
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 220/385 (57%), Gaps = 35/385 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + + +I +++ ++I AYV + GDV F V K YG+LS Q L+ +AG
Sbjct: 108 PDVEPRATQFITEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV +++ KR+P DF LWK +K GEP+W+SPWGPGRPGWHIECSAM++ L + FDIHGGG
Sbjct: 168 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL FPHHENEIAQSC A V+ WMH+G V + EKMSKSLGNFFTIR + Y
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTKYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLGHYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L+ A ++ +Y +L+ ++ +P E
Sbjct: 288 TVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLKAAP-----------AGGE 336
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ +++ F M+DD NT + F A +N LK + +E +
Sbjct: 337 EYVSR----FTNAMNDDFNTPEAYSVLFDMA-----REVNRLKTES--------VEKASE 379
Query: 308 IENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSK 367
+ ++E+ ++G+L Y + LK A E+ E + LI+ R +R +KD++
Sbjct: 380 LGALMRELADVIGIL----YQDPEAFLKGDAGNDDEVAE--IEALIKLRNDSRASKDWAN 433
Query: 368 SDQIRADLTRKGIALMDMGKETIWR 392
+D R LT GI L D + T WR
Sbjct: 434 ADMARDKLTEMGIVLEDGPEGTTWR 458
>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 467
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 221/394 (56%), Gaps = 31/394 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L P T+QPR ++ + + MI +I AY V+G V+F +YG+LS + +
Sbjct: 99 MEALNIKPATHQPRATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNI 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ AG R V + K++P DF LWK K GE +WDSPWG GRPGWHIECS MS Y+
Sbjct: 159 DDLEAGHREIKVTGEEGKKDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYI 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
DIH GG DLIFPHHENEIAQS A + +YWMHNG + NN+KMSKS GNFFT+
Sbjct: 219 GDTIDIHAGGEDLIFPHHENEIAQSEACNGEKFANYWMHNGFLNINNKKMSKSAGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y +R F++SAHYR+PLN+S ++SA + I + C ++ +E G
Sbjct: 279 REIGEKYPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCR-EMAAKEETG 337
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
++ I L +F M DD NT+ ++ F+ ++++ +
Sbjct: 338 SLSKEETEHFANIEVLVKKFEDAMEDDFNTADAVSAIFE-----------IVRESNSTVK 386
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
S + +KI ++++ +LG+ + K E+ +E++ +LIEER
Sbjct: 387 DFSA-DYAKKILKVLEDLCSVLGI---------------ETTKEEEILDEEIEKLIEERQ 430
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
AARKNKDF+++D+IR L +GI L D + W
Sbjct: 431 AARKNKDFARADEIRDQLLEQGIVLKDTREGVKW 464
>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
Length = 463
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 222/393 (56%), Gaps = 50/393 (12%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P Y+PR ++++ Q+ MI ++ N AY +GDV +AV K P YG+LSG+ LE+ RAGE
Sbjct: 110 PDYEPRATEYVPQMLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK+AKA EP+ W SPWG GRPGWHIECSAMS L FD+H
Sbjct: 170 RVAANDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQS A + V+ WMHNG V N+EKMSKSLGNFFTIR + + Y
Sbjct: 230 GGGADLQFPHHENEIAQSEGATGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKVY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSP----FQEHGKTA 240
+R F++ +HYRS LNYS LD A A+ +Y L+D A + HGK
Sbjct: 290 DAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNESHGK-- 347
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
F M+DD NT ++ F+ + S +N K + P
Sbjct: 348 ---------------RFLEAMNDDFNTPVAVSVLFE-----LASEVN--KTRSP------ 379
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
++ +++ + +LGLL ++ + + L AE+ IEER AA+
Sbjct: 380 ------ELASQLAALAGVLGLLGRDPHAFLQGGVSPDGLDAAEVEAR-----IEERRAAK 428
Query: 361 KNKDFSKSDQIRADLTRKGIALMDM-GKETIWR 392
+DF+++D IRADL GI L D G T WR
Sbjct: 429 AARDFARADAIRADLLAAGIVLEDKPGGVTEWR 461
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123284|ref|YP_005505904.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127139|ref|YP_005509753.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|384139080|ref|YP_005521782.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|420548145|ref|ZP_15045976.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|420553460|ref|ZP_15050726.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|420559037|ref|ZP_15055595.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|420564461|ref|ZP_15060440.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|420569501|ref|ZP_15065018.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|420575167|ref|ZP_15070142.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|420580485|ref|ZP_15074976.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|420585834|ref|ZP_15079824.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|420590946|ref|ZP_15084421.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|420596334|ref|ZP_15089269.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|420601996|ref|ZP_15094308.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|420607428|ref|ZP_15099212.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|420612817|ref|ZP_15104048.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|420618197|ref|ZP_15108746.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|420623493|ref|ZP_15113510.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|420628572|ref|ZP_15118118.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|420633693|ref|ZP_15122712.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|420638899|ref|ZP_15127398.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|420644384|ref|ZP_15132392.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|420649655|ref|ZP_15137163.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|420655294|ref|ZP_15142232.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|420660785|ref|ZP_15147156.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|420666090|ref|ZP_15151921.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|420670966|ref|ZP_15156357.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|420676308|ref|ZP_15161217.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|420681923|ref|ZP_15166294.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|420687244|ref|ZP_15171028.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|420692464|ref|ZP_15175609.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|420698237|ref|ZP_15180687.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|420704036|ref|ZP_15185317.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|420709438|ref|ZP_15190082.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|420714890|ref|ZP_15194936.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|420720394|ref|ZP_15199666.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|420725871|ref|ZP_15204476.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|420731467|ref|ZP_15209496.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|420736490|ref|ZP_15214034.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|420741963|ref|ZP_15218954.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|420747666|ref|ZP_15223787.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|420753121|ref|ZP_15228643.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|420758860|ref|ZP_15233290.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|420764162|ref|ZP_15237915.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|420769390|ref|ZP_15242606.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|420774374|ref|ZP_15247118.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|420779986|ref|ZP_15252059.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|420785573|ref|ZP_15256951.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|420790732|ref|ZP_15261580.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|420796262|ref|ZP_15266544.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|420801311|ref|ZP_15271084.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|420806674|ref|ZP_15275938.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|420812024|ref|ZP_15280749.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|420817545|ref|ZP_15285730.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|420822854|ref|ZP_15290497.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|420827943|ref|ZP_15295069.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|420833622|ref|ZP_15300202.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|420838498|ref|ZP_15304604.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|420843684|ref|ZP_15309311.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|420849347|ref|ZP_15314399.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|420854999|ref|ZP_15319197.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|420860203|ref|ZP_15323771.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|421764579|ref|ZP_16201368.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
gi|21264007|sp|Q8ZCC0.1|SYC_YERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123073499|sp|Q1CKY1.1|SYC_YERPN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123372235|sp|Q1C4U1.1|SYC_YERPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470969|sp|A7FL46.1|SYC_YERP3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187470970|sp|A4TP63.1|SYC_YERPP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558804|sp|A9R253.1|SYC_YERPG RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|342854209|gb|AEL72762.1| cysteinyl-tRNA synthetase [Yersinia pestis A1122]
gi|391423674|gb|EIQ86138.1| cysteine--tRNA ligase [Yersinia pestis PY-01]
gi|391424374|gb|EIQ86753.1| cysteine--tRNA ligase [Yersinia pestis PY-02]
gi|391424729|gb|EIQ87076.1| cysteine--tRNA ligase [Yersinia pestis PY-03]
gi|391438705|gb|EIQ99426.1| cysteine--tRNA ligase [Yersinia pestis PY-04]
gi|391439857|gb|EIR00474.1| cysteine--tRNA ligase [Yersinia pestis PY-05]
gi|391443572|gb|EIR03875.1| cysteine--tRNA ligase [Yersinia pestis PY-06]
gi|391455549|gb|EIR14656.1| cysteine--tRNA ligase [Yersinia pestis PY-07]
gi|391456444|gb|EIR15468.1| cysteine--tRNA ligase [Yersinia pestis PY-08]
gi|391458487|gb|EIR17345.1| cysteine--tRNA ligase [Yersinia pestis PY-09]
gi|391471519|gb|EIR29074.1| cysteine--tRNA ligase [Yersinia pestis PY-10]
gi|391472873|gb|EIR30293.1| cysteine--tRNA ligase [Yersinia pestis PY-11]
gi|391473719|gb|EIR31069.1| cysteine--tRNA ligase [Yersinia pestis PY-12]
gi|391487453|gb|EIR43379.1| cysteine--tRNA ligase [Yersinia pestis PY-13]
gi|391489029|gb|EIR44814.1| cysteine--tRNA ligase [Yersinia pestis PY-15]
gi|391489638|gb|EIR45367.1| cysteine--tRNA ligase [Yersinia pestis PY-14]
gi|391503544|gb|EIR57731.1| cysteine--tRNA ligase [Yersinia pestis PY-16]
gi|391503810|gb|EIR57967.1| cysteine--tRNA ligase [Yersinia pestis PY-19]
gi|391508889|gb|EIR62571.1| cysteine--tRNA ligase [Yersinia pestis PY-25]
gi|391519328|gb|EIR71970.1| cysteine--tRNA ligase [Yersinia pestis PY-29]
gi|391521221|gb|EIR73707.1| cysteine--tRNA ligase [Yersinia pestis PY-34]
gi|391522153|gb|EIR74563.1| cysteine--tRNA ligase [Yersinia pestis PY-32]
gi|391534333|gb|EIR85521.1| cysteine--tRNA ligase [Yersinia pestis PY-36]
gi|391537088|gb|EIR88010.1| cysteine--tRNA ligase [Yersinia pestis PY-42]
gi|391539374|gb|EIR90102.1| cysteine--tRNA ligase [Yersinia pestis PY-45]
gi|391552393|gb|EIS01819.1| cysteine--tRNA ligase [Yersinia pestis PY-46]
gi|391552769|gb|EIS02164.1| cysteine--tRNA ligase [Yersinia pestis PY-47]
gi|391553371|gb|EIS02701.1| cysteine--tRNA ligase [Yersinia pestis PY-48]
gi|391567328|gb|EIS15201.1| cysteine--tRNA ligase [Yersinia pestis PY-52]
gi|391568468|gb|EIS16184.1| cysteine--tRNA ligase [Yersinia pestis PY-53]
gi|391573381|gb|EIS20451.1| cysteine--tRNA ligase [Yersinia pestis PY-54]
gi|391581635|gb|EIS27496.1| cysteine--tRNA ligase [Yersinia pestis PY-55]
gi|391584036|gb|EIS29622.1| cysteine--tRNA ligase [Yersinia pestis PY-56]
gi|391594270|gb|EIS38438.1| cysteine--tRNA ligase [Yersinia pestis PY-58]
gi|391597353|gb|EIS41185.1| cysteine--tRNA ligase [Yersinia pestis PY-60]
gi|391598656|gb|EIS42350.1| cysteine--tRNA ligase [Yersinia pestis PY-59]
gi|391611769|gb|EIS53912.1| cysteine--tRNA ligase [Yersinia pestis PY-61]
gi|391612314|gb|EIS54398.1| cysteine--tRNA ligase [Yersinia pestis PY-63]
gi|391615548|gb|EIS57299.1| cysteine--tRNA ligase [Yersinia pestis PY-64]
gi|391624825|gb|EIS65408.1| cysteine--tRNA ligase [Yersinia pestis PY-65]
gi|391630058|gb|EIS69884.1| cysteine--tRNA ligase [Yersinia pestis PY-66]
gi|391635620|gb|EIS74755.1| cysteine--tRNA ligase [Yersinia pestis PY-71]
gi|391637683|gb|EIS76572.1| cysteine--tRNA ligase [Yersinia pestis PY-72]
gi|391647632|gb|EIS85241.1| cysteine--tRNA ligase [Yersinia pestis PY-76]
gi|391651309|gb|EIS88497.1| cysteine--tRNA ligase [Yersinia pestis PY-88]
gi|391656004|gb|EIS92682.1| cysteine--tRNA ligase [Yersinia pestis PY-89]
gi|391660617|gb|EIS96746.1| cysteine--tRNA ligase [Yersinia pestis PY-90]
gi|391668146|gb|EIT03408.1| cysteine--tRNA ligase [Yersinia pestis PY-91]
gi|391677645|gb|EIT11934.1| cysteine--tRNA ligase [Yersinia pestis PY-93]
gi|391678488|gb|EIT12696.1| cysteine--tRNA ligase [Yersinia pestis PY-92]
gi|391679224|gb|EIT13376.1| cysteine--tRNA ligase [Yersinia pestis PY-94]
gi|391691554|gb|EIT24472.1| cysteine--tRNA ligase [Yersinia pestis PY-95]
gi|391694557|gb|EIT27202.1| cysteine--tRNA ligase [Yersinia pestis PY-96]
gi|391696240|gb|EIT28745.1| cysteine--tRNA ligase [Yersinia pestis PY-98]
gi|391708199|gb|EIT39474.1| cysteine--tRNA ligase [Yersinia pestis PY-99]
gi|391711820|gb|EIT42751.1| cysteine--tRNA ligase [Yersinia pestis PY-100]
gi|391712687|gb|EIT43541.1| cysteine--tRNA ligase [Yersinia pestis PY-101]
gi|391724443|gb|EIT54019.1| cysteine--tRNA ligase [Yersinia pestis PY-102]
gi|391725375|gb|EIT54847.1| cysteine--tRNA ligase [Yersinia pestis PY-103]
gi|391727841|gb|EIT57009.1| cysteine--tRNA ligase [Yersinia pestis PY-113]
gi|411174690|gb|EKS44721.1| cysteinyl-tRNA ligase [Yersinia pestis INS]
Length = 461
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 210/387 (54%), Gaps = 38/387 (9%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PR + H+ +I +M ++I AYV GDV FAV+ P+YG LS Q L+ +AG
Sbjct: 108 PDLEPRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
RV V KRNP DF LWK +K GEP W+SPWGPGRPGWHIECSAM+ L + FDIHGGG
Sbjct: 168 RVEVADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR + Y
Sbjct: 228 SDLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAYYDAE 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAE 247
+R+FL+S HYRS LNYS L A ++ +Y L+ G A PA
Sbjct: 288 TVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALR------------GTDANATPAGG 335
Query: 248 DCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRK 307
+ F M DD NT + F I +N LK + + +
Sbjct: 336 ---AEFEARFRTAMDDDFNTPEAYSVLFD-----IAREVNRLKNED--------MAAANG 379
Query: 308 IENEVKEVLRILGLLP--PGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDF 365
+ E++++ ++LGLL P + + Q D + + E LI++R AR +K++
Sbjct: 380 LAAELRKLAQVLGLLEQDPELFLQGGAQADDDEVAKIE-------ALIKQRNDARSSKNW 432
Query: 366 SKSDQIRADLTRKGIALMDMGKETIWR 392
+ +D R L GI L D + T WR
Sbjct: 433 ALADAARDQLNELGIVLEDGPQGTTWR 459
>gi|411117203|ref|ZP_11389690.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
gi|410713306|gb|EKQ70807.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
Length = 495
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 228/402 (56%), Gaps = 21/402 (5%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M L LP P+ ++ + QI D I ++I+ AY +GDV++AVEK P YG+LSG++L
Sbjct: 101 MKRLNILPAVAYPKATEVIPQIIDFIKRLIDQGYAYAADGDVYYAVEKFPPYGKLSGRKL 160
Query: 61 ENNRAGERVAVD----SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHY 116
+ AG VD ++KR+P DFALWKAAK GEP W+SPWG GRPGWHIECSAM
Sbjct: 161 DQMEAGASGRVDEEAETKKRHPLDFALWKAAKPGEPEWESPWGMGRPGWHIECSAMVKEL 220
Query: 117 LSSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFT 176
L + DIH GG DL+FPHHENEIAQS AA ++W+HNG V +KMSKSL NF T
Sbjct: 221 LGDRIDIHTGGEDLVFPHHENEIAQSEAALAKPLSTFWLHNGFVKIRGDKMSKSLKNFTT 280
Query: 177 IRQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEH 236
IR + E P+ +R F++ AHYRSP++++ D A A ++T+ + + F
Sbjct: 281 IRSLLETTDPMVVRLFVLQAHYRSPIDFT----DEAIAAAENGWKTISEALESFKKFSRL 336
Query: 237 GKTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQ 296
+ P D + R F+ M DD NT L+ F+ A + + + +P +
Sbjct: 337 PDWSTYYPGNLDSVYVER--FNEAMDDDFNTPVALSVIFELAKELRREQNLLTHQGKPGK 394
Query: 297 QQLSLIESLRKIENEVKEVLRILGLL---PPGAYSEV---LQQLKDKALKRAELTEEDVL 350
+ E + + ++L ILGL P +E + + + + E+T+ +V
Sbjct: 395 STKQIAEYCQTL----AQLLNILGLKAEDPAPIVAERGLGISRGDVVIISKTEMTDAEVD 450
Query: 351 QLIEERAAARKNKDFSKSDQIRADLTRKGIALM-DMGKETIW 391
L+++R ARK K++++SD+IR +L KGI L+ D G T W
Sbjct: 451 ALVQQRNEARKAKNWAESDRIRNELQEKGITLIDDKGGVTRW 492
>gi|340356801|ref|ZP_08679442.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
gi|339620139|gb|EGQ24710.1| cysteine--tRNA ligase [Sporosarcina newyorkensis 2681]
Length = 473
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 222/392 (56%), Gaps = 34/392 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C T PRV++H+ I I +I AY GDV+F + YG+LS Q ++
Sbjct: 111 LGCEKATAHPRVTEHIGDIVQFIQLLIEKGYAYESNGDVYFHTREFDGYGKLSHQSIDEL 170
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ ++ K +P DFALWKAAK GE SWDSPWG GRPGWHIECS M+ L DI
Sbjct: 171 KVGARIEENAIKSDPLDFALWKAAKEGEISWDSPWGKGRPGWHIECSVMARELLGDTIDI 230
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS AA + +YWMHNG++ +NEKMSKSLGNF + I ++
Sbjct: 231 HAGGQDLTFPHHENEIAQSEAATGKTFANYWMHNGYINIDNEKMSKSLGNFILVHDIRKQ 290
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
P LR F++S HYR P+N++ +++A++ + I + + LS +A +
Sbjct: 291 IDPQVLRFFMLSVHYRHPVNFAQDLVENAANGLERIRTAYHNVQHRLS------MSADLA 344
Query: 244 PAAEDCINKLRDE---FHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ ++++ ++ F M DD NT++ + F+ A + +++ +L+K +Q
Sbjct: 345 EDPQSWLSRIDEQITAFENAMDDDFNTANAIAAIFELAKQ---ANVYLLEKNTDRQVLER 401
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
+E+ +++ +LGL + V EL +E+V LI+ER AR
Sbjct: 402 FLEAF-------DQLMGVLGL----PFESV-----------DELVDEEVDALIQERLDAR 439
Query: 361 KNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
KN+DF+++D+IR L KGI L D + T W+
Sbjct: 440 KNRDFARADEIRDQLKAKGIVLEDTAQGTRWK 471
>gi|387819784|ref|YP_005680131.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 465
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 225/391 (57%), Gaps = 29/391 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLEN 62
DL T PR ++ ME+I ++ +I AY ++GDV+F+ +K +YG+LSGQ LE
Sbjct: 101 DLNIERATKNPRATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEE 160
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G R+ VD RK++P DFA+WK+ K GEP+W+SPWG GRPGWHIECS M+ + L D
Sbjct: 161 LQLGARINVDERKKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETID 220
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DL FPHHENEIAQS A YW+H+ V NN+KMSKSL NFFT RQI E
Sbjct: 221 IHAGGSDLSFPHHENEIAQSEARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILE 280
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTAR 241
+Y LR F++S HYR+ +N+S+ LDS A+ +Y ++ + E L + E +
Sbjct: 281 KYDADVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEE 340
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+ E + K ++++ +M DD NT+ ++ F D ++ +N+++ + K+ + L L
Sbjct: 341 LEYKNE--LQKYKEKYIEKMDDDFNTADAISVIF-DLIRDVNTNVTIESSKEIVKYTLDL 397
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
I +E+ LG+L + + ++++ +R + ARK
Sbjct: 398 I----------RELGSPLGILQESTKASLEEEIEKLIEERQK---------------ARK 432
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D+IR +L +GI L D + W+
Sbjct: 433 EKNWALADKIRDNLKERGIVLEDTPQGVRWK 463
>gi|344924396|ref|ZP_08777857.1| cysteinyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
L13]
gi|297717798|gb|ADI50042.1| cysteinyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
L13]
Length = 452
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/394 (39%), Positives = 204/394 (51%), Gaps = 46/394 (11%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA L P PR +DH+ ++ MI +I N AY EG V FAV+ YG+LS +
Sbjct: 101 MAALAAFAPDVTPRATDHIPEMIHMIEDLIANGHAYAAEGHVLFAVKTFGAYGKLSRRNH 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ AG RV + KR+P DF LWK + A P WDSPWG GRPGWHIECSAMS YL
Sbjct: 161 DELLAGARVEIAPYKRDPGDFVLWKPSDAETPGWDSPWGRGRPGWHIECSAMSEKYLGKT 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQ-DSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGGIDL FPHHENE+AQSC A + D YWMHNGH+T N EKMSKSLGNF+T+R+
Sbjct: 221 FDIHGGGIDLSFPHHENELAQSCCANKTDYFAKYWMHNGHLTVNGEKMSKSLGNFYTVRE 280
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + +LR+ L+SAHYR PL+ S + + C+ +L +
Sbjct: 281 LLSEFTGESLRYMLMSAHYRQPLDLSK--------------ELIHQCQASLDRLYGALRG 326
Query: 240 ARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQL 299
++ D D+ + + DDLN AL ++ K + QQ+
Sbjct: 327 IKVYEGGID------DQMMSALLDDLNVPL--------ALARLHELATATNKAEDPQQKS 372
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-VLQLIEERAA 358
L +L+ G +LQQ + K A L D V LI +R
Sbjct: 373 QLASTLKA----------------SGYLLGILQQDPEAWFKGATLANADEVEALIAQRNQ 416
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR +DF+K+D +R LT GI L D T WR
Sbjct: 417 ARSARDFAKADSLRQQLTDMGIVLEDSPAGTTWR 450
>gi|384084823|ref|ZP_09995998.1| cysteinyl-tRNA synthetase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 222/395 (56%), Gaps = 43/395 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRL 60
A L C P +PR ++H+ +++MI ++I AY GDV++AV P+YG+LSG+ +
Sbjct: 107 AALLCQKPDLEPRATEHVGAMQNMIAELIERGHAYAAANGDVYYAVRSFPDYGKLSGKSI 166
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
+ +G RV + KR+P DFALWKAAK EPSW SPWG GRPGWHIECSAMSA L
Sbjct: 167 DELNSGARVELGEDKRDPLDFALWKAAKPDEPSWSSPWGEGRPGWHIECSAMSADALGCT 226
Query: 121 FDIHGGGIDLIFPHHENEIAQS-CAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
FDIHGGG DL FPHHENEIAQS A C ++ YWMHNG V N+EKMSKSL NF T+R+
Sbjct: 227 FDIHGGGADLQFPHHENEIAQSQGAGCAFAH--YWMHNGFVRINDEKMSKSLNNFLTVRE 284
Query: 180 ITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKT 239
+ + LR F++S+ YRSPL+YS L+ A + +Y L+ G
Sbjct: 285 LLPLFSGEVLRFFILSSQYRSPLHYSEEGLEQARAGLTRLYTALR------------GMP 332
Query: 240 AR-INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
AR I P + ++ R+ FH MSDD +T L F + +N L+ +Q
Sbjct: 333 ARQIVP---ELGSEWRERFHNAMSDDFHTPAALATLFD-----LAREVNRLRDEQS---- 380
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEED-VLQLIEERA 357
E + ++E+ +LG +LQ+ + + + ++ + + I R
Sbjct: 381 ----EVAAPLATLLRELAAMLG---------ILQEDPESYFRGSNESDNAWIEERIAARL 427
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AAR+ KDF+ +D IRA+L GI L D T WR
Sbjct: 428 AARQKKDFAGADAIRAELAAAGIILEDGPAGTSWR 462
>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|229558627|sp|B1KTA5.1|SYC_CLOBM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 465
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 224/391 (57%), Gaps = 29/391 (7%)
Query: 3 DLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLEN 62
DL T PR ++ ME+I ++ +I AY ++GDV+F+ +K +YG+LSGQ LE
Sbjct: 101 DLNIERATKNPRATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEE 160
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+ G R+ VD RK++P DFA+WK K GEP+W+SPWG GRPGWHIECS M+ + L D
Sbjct: 161 LQLGSRINVDERKKDPMDFAIWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETID 220
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IH GG DL FPHHENEIAQS A YW+H+ V NN+KMSKSL NFFT R+I E
Sbjct: 221 IHAGGSDLSFPHHENEIAQSEARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE 280
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQ-EHGKTAR 241
+Y LR F++S HYR+ +N+S+ LDS A+ +Y ++ + E L + E +
Sbjct: 281 KYDADVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEE 340
Query: 242 INPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSL 301
+ E + K ++++ +M DD NT+ ++ F D ++ +N+++ + K+ + L L
Sbjct: 341 LEYKNE--LQKYKEKYIEKMDDDFNTADAISVIF-DLIRDVNTNVTIESSKELVKYTLDL 397
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARK 361
I +E+ LG+L + + ++++ +R + ARK
Sbjct: 398 I----------RELGNPLGILQESTKASLEEEIEKLIEERQK---------------ARK 432
Query: 362 NKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K+++ +D+IR DL +GI L D + W+
Sbjct: 433 EKNWALADKIRDDLKERGIVLEDTPQGVRWK 463
>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
Length = 468
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 215/397 (54%), Gaps = 30/397 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + +MI +I AY G V+F +YG+LS + L
Sbjct: 99 MEGMNVKPATKHPLATEEICGMVEMIGSLIEKGYAYEKNGTVYFRTRSFKDYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R GER V + K +P DF LWK K GEP+WDSPW GRPGWHIECS MS YL
Sbjct: 159 DDLRTGERSLLVTGEDEKEDPLDFVLWKPKKEGEPAWDSPWSDGRPGWHIECSVMSRKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DL+FPHHENEIAQS AA YWMHN + +N KMSKSLGNF T+
Sbjct: 219 GEQIDIHAGGEDLVFPHHENEIAQSEAANGKEFAKYWMHNAFLNIDNHKMSKSLGNFRTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I+E+Y LR F++SAHYRSPLN+S ++++ + + I + + + +
Sbjct: 279 REISEQYDLQVLRFFMLSAHYRSPLNFSADLMEASRNGLERIVNAAGNLKFLMGSAKSEE 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
TA+ A ++ F A M DD NT+ + F+ +K+IN++ + + Q
Sbjct: 339 MTAQEREAFAGSEEFVKG-FEAAMDDDFNTADAVAAVFE-LVKYINTTADAHSSRAYLQA 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
LS + L +LGL+ K+ ++ EE++ +LI ER
Sbjct: 397 LLSRLVKLTD----------VLGLIVD---------------KKEDMLEEEIEKLIAERQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWRPC 394
AARK K+F+++D+IR L KGI L D + W+
Sbjct: 432 AARKEKNFARADEIRGTLLEKGIILEDTREGVKWKKA 468
>gi|451817039|ref|YP_007453240.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783018|gb|AGF53986.1| cysteine--tRNA ligase CysS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 220/383 (57%), Gaps = 33/383 (8%)
Query: 13 PRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGERVAVD 72
PR +++++ I + ++I D AY V+GDV+++ +K NYG+L+GQ LE+ +AG R++VD
Sbjct: 111 PRATEYIKDIIKFVEELIAADFAYEVDGDVYYSTKKFSNYGQLAGQNLEDLQAGARISVD 170
Query: 73 SRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGGIDLIF 132
RK++P DFA+WKA K GEP+W+SPWG GRPGWHIECS M+ L DIH GG+DL F
Sbjct: 171 ERKKDPMDFAIWKAQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHAGGMDLKF 230
Query: 133 PHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPLALRHF 192
PHHENEIAQS A +YW+H V +N+KMSKSL NFFT R+I + Y A+R
Sbjct: 231 PHHENEIAQSEAVTGKKFANYWLHAAFVNVDNKKMSKSLNNFFTAREILQEYDADAIRFL 290
Query: 193 LISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINPAAED---C 249
++S HYR +N++ LDSA ++ + L +C L ++ ++ +D
Sbjct: 291 MLSGHYRIQINFTKELLDSAKASI----ERLYNCINNLENLKDEVSKKTMDNGEDDYLKS 346
Query: 250 INKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIESLRKIE 309
++K R++F +M DD NT+ ++ F ++ K S E + +
Sbjct: 347 LSKYREKFIEKMDDDFNTADAISVLF-----------DLAKDINNNVNINSSAELCEETK 395
Query: 310 NEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKDFSKSD 369
V+E+ + LG +LQ K L E ++ +LI+ R ARK++DF+ +D
Sbjct: 396 KLVRELGKPLG---------ILQTYMKKDL------EAEIQELIDRRQQARKDRDFALAD 440
Query: 370 QIRADLTRKGIALMDMGKETIWR 392
+IR DL + I L D + W+
Sbjct: 441 KIRDDLKSRNIILEDTPQGVRWK 463
>gi|418326367|ref|ZP_12937553.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|420164365|ref|ZP_14671095.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
gi|420169345|ref|ZP_14675946.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|365225778|gb|EHM67016.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU071]
gi|394231375|gb|EJD77005.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM087]
gi|394231754|gb|EJD77377.1| cysteine--tRNA ligase [Staphylococcus epidermidis NIHLM095]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/384 (41%), Positives = 217/384 (56%), Gaps = 33/384 (8%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L T PRV HM +I D I ++++ AY +GDV+F + YG+LS Q L++
Sbjct: 103 LNVKKATSNPRVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDL 162
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
+ G R+ +K + DF LWK AK GE SWDSP+G GRPGWHIECS M+ H L S DI
Sbjct: 163 KVGARIEAGEQKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGSTIDI 222
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A +YWMHNG + +NEKMSKSLGNF + I +
Sbjct: 223 HAGGSDLQFPHHENEIAQSEAHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDIIKE 282
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYI---YQTLQDCEVALSPFQEHGKTA 240
P LR F+IS HYRSP+NY++ + +A + I Y+ +++ E + +E +
Sbjct: 283 VDPDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIATDLEEQSEYI 342
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
+ I+K+ ++F M DD NT++ +T A+ D K N K + S
Sbjct: 343 Q-------QIDKILNQFETVMDDDFNTANAVT-AWYDLAKLAN--------KYVLENTTS 386
Query: 301 LIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAAR 360
K+ N KEV I +S+VL + K+ + EL +ED+ QLIEER AR
Sbjct: 387 T-----KVLNRFKEVYSI--------FSDVL-GIPLKSKETEELLDEDIEQLIEERNEAR 432
Query: 361 KNKDFSKSDQIRADLTRKGIALMD 384
KNKDF+++D+IR L + I L D
Sbjct: 433 KNKDFARADEIRDMLKARHIILED 456
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5.1|SYC_PHOLL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 218/394 (55%), Gaps = 42/394 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVE-GDVFFAVEKSPNYGRLSGQRLEN 62
L L P +PR + H+++I + +I AYV + GDV F+VE +YG LS Q L
Sbjct: 103 LNILRPDLEPRATRHIQEIIALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQ 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
+AG RV V KRNP DF LWK +K GEPSW+SPWG GRPGWHIECSAM++ L + FD
Sbjct: 163 LQAGARVEVADVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL+FPHHENEIAQS A V+YWMH+G V + EKMSKSL NFFTIR +
Sbjct: 223 IHGGGADLMFPHHENEIAQSTCAHDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y +R+FL+S HYRS LNY+ L A A+ Y L+ G A +
Sbjct: 283 YYDAETVRYFLLSGHYRSQLNYTEDNLKQARTALERFYTALR------------GTDASV 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLI 302
PA + F M+DD NT + F D ++ IN LK + +
Sbjct: 331 PPAGGEIFEA---RFIDAMNDDFNTPEAYSVLF-DMVREINR----LKSED--------M 374
Query: 303 ESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRA-ELTEEDVLQ---LIEERAA 358
++ + E++++ ILGL LQQ ++ L R + +E++ + LI++R
Sbjct: 375 DAANGLAAELRKLAGILGL---------LQQQPEQFLHRGIQADDEEIAKIEALIKQRND 425
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
ARKNKD+ +D R L GI L D + T WR
Sbjct: 426 ARKNKDWPLADSARNQLNEMGIELEDGPQGTSWR 459
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/393 (41%), Positives = 214/393 (54%), Gaps = 42/393 (10%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVV-EGDVFFAVEKSPNYGRLSGQRLEN 62
L L P +P V+ HM++I +M+ ++I AYV +GDV F V YG LS Q L
Sbjct: 103 LNMLRPDVEPTVTGHMDEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTM 162
Query: 63 NRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFD 122
++G RV V K +P DF LWK AKAGEPSW SPWG GRPGWHIECSAMS+ +L FD
Sbjct: 163 LQSGSRVEVAQDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFD 222
Query: 123 IHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE 182
IHGGG DL FPHHENEIAQSC A V+ W+H G V N EKMSKSL NFFT+R + +
Sbjct: 223 IHGGGSDLQFPHHENEIAQSCCANNGEYVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVLK 282
Query: 183 RYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARI 242
Y P ++R+FLIS HYRS LNYS LD A ++ IY L+D + P +
Sbjct: 283 EYDPESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRD----VKPIE-------- 330
Query: 243 NPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ-QLSL 301
E N+ +F M DD NT L F+ + LN +K+ Q QL+
Sbjct: 331 ---CELESNEFVIKFRKAMDDDFNTPEALPVLFE-----LAKELNRVKESDAIQAGQLAF 382
Query: 302 IESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEE--DVLQLIEERAAA 359
I ++ + +LG V QQ + L+ + E + LI +R A
Sbjct: 383 I---------LRTIGEVLG---------VAQQAPEAFLQGGQDDNEVATIEALIVKRNDA 424
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
R +K+++ +D+ R L G+ L D +T WR
Sbjct: 425 RASKNWAAADEARDALNALGVILEDSAGKTTWR 457
>gi|317500158|ref|ZP_07958391.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087615|ref|ZP_08336543.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
gi|316898447|gb|EFV20485.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330399794|gb|EGG79454.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 468
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 219/395 (55%), Gaps = 30/395 (7%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
M + P T P ++ + + +MI+ +I AY G V++ K YG+LS + L
Sbjct: 99 MEAMNVKPATKNPLATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNL 158
Query: 61 ENNRAGER---VAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYL 117
++ R+G R V + K +P DF LWK K GEP+W+SPW GRPGWHIECS MS YL
Sbjct: 159 DDLRSGGRSLLVTGEDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYL 218
Query: 118 SSKFDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTI 177
+ DIH GG DLIFPHHENEIAQS AA YWMHNG + +N+KMSKSLGNFFT+
Sbjct: 219 GEQIDIHAGGEDLIFPHHENEIAQSEAANGKEFAKYWMHNGFLNIDNKKMSKSLGNFFTV 278
Query: 178 RQITERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHG 237
R+I E+Y LR F++SAHYRSPLN+S +++A +++ I + + +S E
Sbjct: 279 REIGEKYDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEK 338
Query: 238 KTARINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQ 297
T E ++ + F M DD NT+ + F D +K++N++ + K+ Q
Sbjct: 339 MTESEKRLFEKS-SEYVEAFERAMDDDFNTADAIAAIF-DLVKYMNTTADGASSKEYLQN 396
Query: 298 QLSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERA 357
L + L +LG++ +K E+ + ++ ++IE+R
Sbjct: 397 LLDRLCLLTD----------VLGII---------------VIKEEEMLDSEIEEMIEKRQ 431
Query: 358 AARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AARK+++F+ +DQIR +L KGI L D + W+
Sbjct: 432 AARKDRNFALADQIRDELLAKGIILEDTREGVKWK 466
>gi|398309196|ref|ZP_10512670.1| cysteinyl-tRNA ligase [Bacillus mojavensis RO-H-1]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 209/394 (53%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV ++M+ I D I Q++ AY EGDV+F YG+LS Q ++
Sbjct: 104 LGCRKADLHPRVMENMDAIIDFIDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R+G R+ V +K + DFALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DI
Sbjct: 164 RSGARIRVGEKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P LR F++S HYR P+NYS L++ A + A S Q H + N
Sbjct: 284 HDPQLLRFFMLSVHYRHPINYSEELLENTKSA-------FNRLKTAYSNLQ-HRLNSSTN 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+D I + R F M DD NT++ ++ F A N++ + +
Sbjct: 336 LTEDDDKWVAKIEEHRTAFEEAMDDDFNTANAISVLFDLAK---NANYYLQEDHTADHVI 392
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ I+ +I + +LG +L EL ++++ LIE+R
Sbjct: 393 TAFIDMFDRI-------VSVLGF----------------SLGEQELLDQEIEDLIEKRNE 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 430 ARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWK 463
>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
Length = 465
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/389 (41%), Positives = 214/389 (55%), Gaps = 40/389 (10%)
Query: 9 PTYQPRVSDHMEQIKDMITQIINNDCAY-VVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P ++PR ++++ Q+ MI ++ N AY +GDV +AV K YG+LSG+ LE+ RAGE
Sbjct: 110 PDHEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFAGYGKLSGKSLEDLRAGE 169
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPS---WDSPWGPGRPGWHIECSAMSAHYLSSKFDIH 124
RVA + K++P DF LWK+AKA EP+ W SPWG GRPGWHIECSAMS L + FD+H
Sbjct: 170 RVAANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLH 229
Query: 125 GGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERY 184
GGG DL FPHHENEIAQ+ A ++ V+ WMHNG V N+EKMSKSLGNFFTIR++ + Y
Sbjct: 230 GGGADLQFPHHENEIAQAEGANGNTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKVY 289
Query: 185 HPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARINP 244
P +R F++ +HYRS LNYS LD A A+ +Y L+D A+
Sbjct: 290 DPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVG------------- 336
Query: 245 AAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLSLIES 304
A D F M+DD NT + F+ + S +N + Q +
Sbjct: 337 AKPDWSESHGQRFREAMNDDFNTPVAMAVLFE-----LASEVNKTRSAALASQLAA---- 387
Query: 305 LRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAARKNKD 364
+ V+ +LG P + D L +V IE R A+ +D
Sbjct: 388 -------LGGVMGLLGRDPHAFLQGGVGAAADG------LDTAEVEARIEARRVAKAARD 434
Query: 365 FSKSDQIRADLTRKGIALMDM-GKETIWR 392
F+++D IRADL GI L D G T WR
Sbjct: 435 FARADGIRADLLAAGIVLEDKPGGVTEWR 463
>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 487
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/390 (39%), Positives = 227/390 (58%), Gaps = 17/390 (4%)
Query: 8 PPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENNRAGE 67
P +PRV+ H+ I + I ++++ AY +GDV+F+V K YG+LS + ++ AG
Sbjct: 108 PADVEPRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGA 167
Query: 68 RVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDIHGGG 127
R+ +K++P DFALWK+AKAGEP W+SPWG GRPGWH EC AM +L DIHGGG
Sbjct: 168 RIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGG 227
Query: 128 IDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITERYHPL 187
+DL FPHHENEIAQ+ A YW+HNG VT N +KMSKSLGN+ T+++I +Y P
Sbjct: 228 LDLTFPHHENEIAQAEALTGKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYSKYEPD 287
Query: 188 ALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALS-PFQEHGKTARINPAA 246
LR ++S HYRSPL++S +++ A + +++ EV P +E+ + N
Sbjct: 288 ILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIEENFEGDLYN--- 344
Query: 247 EDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS--LIES 304
+ K + F++ MSDD NT L F + +N+L+ K K +S +ES
Sbjct: 345 --AVQKAQSGFYSAMSDDFNTPEALASLFG-----LVREMNILRDKAIKHGGISKKALES 397
Query: 305 LRKIENEVKEVLR-ILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQ-LIEERAAARKN 362
++ + ++ R I GL + ++Q + KA ++ E ED++Q LIE R ARK+
Sbjct: 398 YKEAAKTLHDIGRDIFGLFD--SLQPCVKQEEIKAKEKEESINEDLIQVLIEAREKARKD 455
Query: 363 KDFSKSDQIRADLTRKGIALMDMGKETIWR 392
K F+ +D IR L KGI L D T W+
Sbjct: 456 KQFAIADLIRDKLAEKGIILEDTPFGTKWK 485
>gi|408372449|ref|ZP_11170149.1| cysteinyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
gi|407767424|gb|EKF75861.1| cysteinyl-tRNA ligase [Alcanivorax hongdengensis A-11-3]
Length = 461
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 213/392 (54%), Gaps = 35/392 (8%)
Query: 1 MADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRL 60
MA+L P PR +DH+ ++ MI ++ AY +G V FAVE P+YG+LSG++L
Sbjct: 101 MANLNAKTPNIIPRATDHIGEMIAMIETLVEKGHAYQADGQVLFAVESMPDYGKLSGRKL 160
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ AG RV V KR+P DF LWK + +P W SPWG GRPGWHIECSAM +L
Sbjct: 161 EDMLAGARVEVADYKRHPGDFILWKPSSDDQPGWASPWGRGRPGWHIECSAMIHKHLGDV 220
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
DIHGGG DLIFPHHENEIAQ C A V YWMHNG++ + EKMSKSLGNF +R +
Sbjct: 221 IDIHGGGQDLIFPHHENEIAQGCCAHGTDYVRYWMHNGYINIDGEKMSKSLGNFRLVRDL 280
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
+YH LR L+S+HYRSPLN+S L++A + +Y L + P +
Sbjct: 281 LTQYHGEVLRFALLSSHYRSPLNFSADVLENAEKGLDTLYYALLGRGETVEP-----EAG 335
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLK-KKQPKQQQL 299
+ P ++ L+ DDLNTS ++ AL I LN + +PK
Sbjct: 336 YLLPDNHPVLDALK--------DDLNTSEAVS-----ALHAIAGELNKAELADKPK---- 378
Query: 300 SLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAAA 359
RK E L L P A+ ++K L +D+ L+ ER A
Sbjct: 379 ------RKAELLAAADLLGLLTEDPTAW------FQNKNASEDGLANDDIDALVAERTQA 426
Query: 360 RKNKDFSKSDQIRADLTRKGIALMDMGKETIW 391
+K+K+F+++D+IR LT GI L D + T W
Sbjct: 427 KKDKNFARADEIRQQLTDAGIQLEDTREGTRW 458
>gi|399520526|ref|ZP_10761302.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399111967|emb|CCH37861.1| cysS [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 461
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 215/394 (54%), Gaps = 40/394 (10%)
Query: 2 ADLQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYV-VEGDVFFAVEKSPNYGRLSGQRL 60
A L L P +PR + H+ + MI +I+ AY GDV++ V K YG+LS +++
Sbjct: 102 ARLSVLRPDIEPRATGHIAGMHQMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKI 161
Query: 61 ENNRAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSK 120
E+ + G R+ VD K +P DF LWK K GEPSW SPWG GRPGWHIECS MS L
Sbjct: 162 EDLKIGARIEVDEAKEDPLDFVLWKGVKPGEPSWQSPWGAGRPGWHIECSVMSTCCLGET 221
Query: 121 FDIHGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180
FDIHGGG DL+FPHHENEIAQS AA + WMH G V + EKMSKSLGNFFTIR++
Sbjct: 222 FDIHGGGPDLVFPHHENEIAQSEAATGKQYANAWMHAGAVRVDGEKMSKSLGNFFTIREV 281
Query: 181 TERYHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTA 240
E+YHP +R+ L+S+HYRSP+NYS L A A+ Y L+ A
Sbjct: 282 LEKYHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEA----------- 330
Query: 241 RINPAAEDCINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQLS 300
PA + + F A M DD N+ F+ + +N L++ S
Sbjct: 331 --APAGGEA---FVERFGAAMDDDFNSPEACAVLFE-----MIREVNRLRE--------S 372
Query: 301 LIESLRKIENEVKEVLRILGL--LPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+++ + ++K++ +LG+ L P A+ L+ A + + E D LI R
Sbjct: 373 DVQAAAGLAAQLKQLASVLGVLQLEPEAF------LQAGAAGKVDAAEVDT--LIAARLQ 424
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR K++++SD+IR LT G+ L D T WR
Sbjct: 425 ARAEKNWAESDRIRDQLTAMGVVLEDGKGGTTWR 458
>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|402774337|ref|YP_006628281.1| cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|452916597|ref|ZP_21965219.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
gi|549024|sp|Q06752.1|SYC_BACSU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|402479523|gb|AFQ56032.1| Cysteinyl-tRNA synthetase [Bacillus subtilis QB928]
gi|407955785|dbj|BAM49025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7613]
gi|407963056|dbj|BAM56295.1| cysteinyl-tRNA synthetase [Bacillus subtilis BEST7003]
gi|452114506|gb|EME04906.1| cysteine--tRNA ligase [Bacillus subtilis MB73/2]
Length = 466
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/394 (39%), Positives = 208/394 (52%), Gaps = 39/394 (9%)
Query: 4 LQCLPPTYQPRVSDHMEQIKDMITQIINNDCAYVVEGDVFFAVEKSPNYGRLSGQRLENN 63
L C PRV ++M+ I + + Q++ AY EGDV+F YG+LS Q ++
Sbjct: 104 LGCRKADLHPRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDEL 163
Query: 64 RAGERVAVDSRKRNPADFALWKAAKAGEPSWDSPWGPGRPGWHIECSAMSAHYLSSKFDI 123
R+G R+ V +K + DFALWKAAK GE SWDSPWG GRPGWHIECSAM YL + DI
Sbjct: 164 RSGARIRVGEKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDI 223
Query: 124 HGGGIDLIFPHHENEIAQSCAACQDSNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER 183
H GG DL FPHHENEIAQS A + YW+HNG++ +NEKMSKSLGNF + I ++
Sbjct: 224 HAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQ 283
Query: 184 YHPLALRHFLISAHYRSPLNYSVLQLDSASDAVFYIYQTLQDCEVALSPFQEHGKTARIN 243
+ P LR F++S HYR P+NYS L++ A + A S Q H + N
Sbjct: 284 HDPQLLRFFMLSVHYRHPINYSEELLENTKSA-------FSRLKTAYSNLQ-HRLNSSTN 335
Query: 244 PAAED-----CINKLRDEFHARMSDDLNTSHILTGAFQDALKFINSSLNMLKKKQPKQQQ 298
+D + + R F M DD NT++ ++ F D K N L K
Sbjct: 336 LTEDDDQWLEKVEEHRKAFEEEMDDDFNTANAISVLF-DLAKHANYYLQ--KDHTADHVI 392
Query: 299 LSLIESLRKIENEVKEVLRILGLLPPGAYSEVLQQLKDKALKRAELTEEDVLQLIEERAA 358
+ IE +I + +LG +L EL ++++ LIE+R
Sbjct: 393 TAFIEMFDRI-------VSVLGF----------------SLGEQELLDQEIEDLIEKRNE 429
Query: 359 ARKNKDFSKSDQIRADLTRKGIALMDMGKETIWR 392
AR+N+DF+ SDQIR L I L D + T W+
Sbjct: 430 ARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWK 463
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,540,527,981
Number of Sequences: 23463169
Number of extensions: 268450293
Number of successful extensions: 886286
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5935
Number of HSP's successfully gapped in prelim test: 282
Number of HSP's that attempted gapping in prelim test: 863774
Number of HSP's gapped (non-prelim): 7292
length of query: 421
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 276
effective length of database: 8,957,035,862
effective search space: 2472141897912
effective search space used: 2472141897912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)