Query 014664
Match_columns 420
No_of_seqs 388 out of 2194
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 15:38:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h00_A Methyltransferase 10 do 100.0 5.3E-38 1.8E-42 297.4 23.1 242 48-345 2-253 (254)
2 3evz_A Methyltransferase; NYSG 99.9 1.4E-26 4.6E-31 214.9 17.6 216 51-347 5-222 (230)
3 2b3t_A Protein methyltransfera 99.9 4.9E-25 1.7E-29 211.9 19.5 193 71-342 76-274 (276)
4 1nv8_A HEMK protein; class I a 99.9 4.7E-25 1.6E-29 215.1 15.2 186 71-343 89-281 (284)
5 4dzr_A Protein-(glutamine-N5) 99.9 3.2E-23 1.1E-27 187.8 6.7 196 77-345 1-206 (215)
6 3lpm_A Putative methyltransfer 99.7 2.3E-16 7.9E-21 150.1 17.1 169 116-347 50-221 (259)
7 2ozv_A Hypothetical protein AT 99.7 2.9E-16 1E-20 150.3 16.5 172 116-348 37-215 (260)
8 3q87_B N6 adenine specific DNA 99.6 3.3E-15 1.1E-19 133.7 15.7 155 82-338 2-156 (170)
9 1o54_A SAM-dependent O-methylt 99.6 3.4E-14 1.2E-18 136.1 17.0 171 68-334 58-243 (277)
10 2fhp_A Methylase, putative; al 99.5 1.7E-14 5.7E-19 128.3 9.5 95 70-176 9-103 (187)
11 3tm4_A TRNA (guanine N2-)-meth 99.5 5E-13 1.7E-17 134.7 19.7 140 116-335 218-357 (373)
12 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.1E-13 7.2E-18 125.4 15.1 166 80-332 19-184 (214)
13 3p9n_A Possible methyltransfer 99.5 2.5E-13 8.4E-18 122.4 15.2 94 71-176 9-102 (189)
14 3tma_A Methyltransferase; thum 99.5 3E-13 1E-17 134.6 16.8 163 89-340 186-349 (354)
15 1dus_A MJ0882; hypothetical pr 99.5 1E-12 3.4E-17 116.4 18.2 161 76-333 24-185 (194)
16 3kr9_A SAM-dependent methyltra 99.5 3.4E-13 1.2E-17 128.1 12.2 123 117-326 17-139 (225)
17 3lec_A NADB-rossmann superfami 99.4 8.5E-13 2.9E-17 125.8 12.9 123 117-326 23-145 (230)
18 1o9g_A RRNA methyltransferase; 99.4 1.8E-13 6.3E-18 128.9 8.2 47 116-162 52-100 (250)
19 4dcm_A Ribosomal RNA large sub 99.4 1.9E-12 6.6E-17 130.9 16.2 120 117-315 224-345 (375)
20 3gnl_A Uncharacterized protein 99.4 7.1E-13 2.4E-17 127.4 12.3 123 117-326 23-145 (244)
21 2igt_A SAM dependent methyltra 99.4 2.1E-12 7E-17 128.7 15.9 172 73-323 117-297 (332)
22 3dmg_A Probable ribosomal RNA 99.4 3E-12 1E-16 130.0 16.8 152 76-316 199-352 (381)
23 1ws6_A Methyltransferase; stru 99.4 4E-13 1.4E-17 117.4 8.5 90 70-175 7-96 (171)
24 3eey_A Putative rRNA methylase 99.4 6.8E-12 2.3E-16 113.1 16.8 116 116-304 23-139 (197)
25 2esr_A Methyltransferase; stru 99.4 8.5E-13 2.9E-17 117.1 9.6 87 77-175 3-89 (177)
26 3e05_A Precorrin-6Y C5,15-meth 99.4 6.8E-12 2.3E-16 114.1 15.6 127 116-330 41-167 (204)
27 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.1E-13 2.8E-17 135.8 10.6 91 74-177 253-344 (433)
28 3mti_A RRNA methylase; SAM-dep 99.4 6.3E-12 2.1E-16 112.2 14.9 145 94-321 8-157 (185)
29 3grz_A L11 mtase, ribosomal pr 99.4 1.2E-11 4.2E-16 112.2 16.8 123 116-329 61-184 (205)
30 3g89_A Ribosomal RNA small sub 99.4 6.6E-12 2.3E-16 119.8 15.3 146 116-346 81-230 (249)
31 1wy7_A Hypothetical protein PH 99.4 7.4E-12 2.5E-16 113.7 14.9 120 116-324 50-169 (207)
32 2frn_A Hypothetical protein PH 99.4 1.1E-11 3.8E-16 119.7 17.0 119 116-323 126-250 (278)
33 1jsx_A Glucose-inhibited divis 99.4 6E-12 2.1E-16 114.1 14.3 142 89-328 45-186 (207)
34 2fpo_A Methylase YHHF; structu 99.4 3.1E-12 1E-16 117.5 11.9 92 71-175 20-111 (202)
35 2b78_A Hypothetical protein SM 99.4 8E-12 2.8E-16 126.6 15.7 132 117-319 214-347 (385)
36 1l3i_A Precorrin-6Y methyltran 99.4 3E-11 1E-15 106.7 17.3 146 85-329 13-158 (192)
37 2yx1_A Hypothetical protein MJ 99.4 1.2E-11 4.1E-16 122.9 16.3 133 116-345 196-332 (336)
38 3dlc_A Putative S-adenosyl-L-m 99.4 1.2E-11 4.2E-16 111.7 14.9 57 118-176 46-102 (219)
39 2ift_A Putative methylase HI07 99.3 2.9E-12 1E-16 117.5 10.7 94 71-176 19-113 (201)
40 2yxd_A Probable cobalt-precorr 99.3 4.6E-11 1.6E-15 104.9 17.7 149 77-328 3-154 (183)
41 2nxc_A L11 mtase, ribosomal pr 99.3 1.8E-11 6.1E-16 116.6 13.4 122 116-329 121-243 (254)
42 1xdz_A Methyltransferase GIDB; 99.3 5.4E-11 1.9E-15 111.4 16.3 143 116-343 71-217 (240)
43 3mb5_A SAM-dependent methyltra 99.3 4E-11 1.4E-15 112.5 15.0 127 116-331 94-223 (255)
44 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.7E-11 6E-16 113.4 12.2 140 116-331 39-180 (213)
45 3c0k_A UPF0064 protein YCCW; P 99.3 4.8E-11 1.6E-15 120.8 16.3 136 117-323 222-363 (396)
46 4fsd_A Arsenic methyltransfera 99.3 3.4E-11 1.2E-15 121.2 14.9 139 115-329 83-250 (383)
47 3gdh_A Trimethylguanosine synt 99.3 9.9E-11 3.4E-15 108.9 16.9 150 116-340 79-228 (241)
48 2pt6_A Spermidine synthase; tr 99.3 4.2E-11 1.4E-15 118.6 15.0 172 71-329 80-258 (321)
49 2yvl_A TRMI protein, hypotheti 99.3 8.5E-11 2.9E-15 109.2 16.1 124 116-330 92-215 (248)
50 3ldu_A Putative methylase; str 99.3 5.1E-11 1.7E-15 121.0 15.6 78 89-176 178-293 (385)
51 3njr_A Precorrin-6Y methylase; 99.3 2.5E-10 8.5E-15 105.1 18.7 119 116-324 56-174 (204)
52 2pjd_A Ribosomal RNA small sub 99.3 6.8E-11 2.3E-15 117.3 15.8 119 116-316 197-315 (343)
53 2f8l_A Hypothetical protein LM 99.3 3E-11 1E-15 119.8 12.9 135 116-322 131-278 (344)
54 3ldg_A Putative uncharacterize 99.3 1.3E-10 4.4E-15 118.2 17.6 78 89-176 177-292 (384)
55 3a27_A TYW2, uncharacterized p 99.3 1.9E-10 6.3E-15 110.9 17.9 89 72-176 88-178 (272)
56 3kkz_A Uncharacterized protein 99.3 1.8E-10 6.2E-15 108.9 17.4 59 116-176 47-105 (267)
57 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.3E-10 4.5E-15 102.1 15.3 123 116-325 26-148 (178)
58 1nkv_A Hypothetical protein YJ 99.2 1.9E-10 6.5E-15 107.3 17.1 77 89-176 19-95 (256)
59 3f4k_A Putative methyltransfer 99.2 2.9E-10 1E-14 106.1 18.3 129 116-329 47-195 (257)
60 3k0b_A Predicted N6-adenine-sp 99.2 1.1E-10 3.9E-15 118.8 16.6 78 89-176 184-299 (393)
61 3ocj_A Putative exported prote 99.2 6.1E-11 2.1E-15 115.0 13.8 60 116-176 119-179 (305)
62 2qm3_A Predicted methyltransfe 99.2 9.4E-11 3.2E-15 117.8 15.4 131 116-330 173-309 (373)
63 3v97_A Ribosomal RNA large sub 99.2 3.2E-11 1.1E-15 131.3 12.6 135 116-323 540-675 (703)
64 3k6r_A Putative transferase PH 99.2 1.6E-10 5.5E-15 112.9 16.2 60 116-177 126-185 (278)
65 3adn_A Spermidine synthase; am 99.2 1.5E-10 5.2E-15 113.4 14.7 172 72-329 48-226 (294)
66 3bzb_A Uncharacterized protein 99.2 1.2E-10 4E-15 112.6 13.3 97 35-162 26-126 (281)
67 1yb2_A Hypothetical protein TA 99.2 1.9E-10 6.4E-15 110.2 14.4 127 116-332 111-239 (275)
68 4dmg_A Putative uncharacterize 99.2 1.2E-10 4.2E-15 118.6 13.9 131 116-323 215-350 (393)
69 2ih2_A Modification methylase 99.2 2.8E-11 9.7E-16 121.8 9.0 129 117-322 41-186 (421)
70 3dtn_A Putative methyltransfer 99.2 5.5E-10 1.9E-14 103.0 16.7 58 115-176 44-101 (234)
71 1wxx_A TT1595, hypothetical pr 99.2 1.5E-10 5.2E-15 116.7 14.0 134 117-323 211-349 (382)
72 1xj5_A Spermidine synthase 1; 99.2 2.2E-10 7.4E-15 114.4 13.6 99 70-176 83-183 (334)
73 4gek_A TRNA (CMO5U34)-methyltr 99.2 1.2E-09 4E-14 105.1 18.0 60 116-176 71-132 (261)
74 2as0_A Hypothetical protein PH 99.2 1.3E-10 4.4E-15 117.5 11.9 115 116-301 218-332 (396)
75 3e23_A Uncharacterized protein 99.2 2.2E-09 7.7E-14 97.5 18.8 139 116-345 44-201 (211)
76 3dxy_A TRNA (guanine-N(7)-)-me 99.2 2.3E-10 7.8E-15 106.9 12.5 130 116-320 35-166 (218)
77 1ne2_A Hypothetical protein TA 99.2 4.2E-10 1.4E-14 101.9 13.8 52 116-175 52-103 (200)
78 2pwy_A TRNA (adenine-N(1)-)-me 99.1 1.1E-09 3.7E-14 102.3 16.8 126 116-330 97-224 (258)
79 3dh0_A SAM dependent methyltra 99.1 1.1E-09 3.7E-14 99.8 16.2 131 116-330 38-181 (219)
80 3jwg_A HEN1, methyltransferase 99.1 6E-10 2E-14 101.9 14.0 78 89-176 12-93 (219)
81 1y8c_A S-adenosylmethionine-de 99.1 1.9E-09 6.5E-14 99.1 17.1 72 92-175 21-92 (246)
82 4htf_A S-adenosylmethionine-de 99.1 2.6E-09 8.9E-14 101.8 18.5 58 116-176 69-126 (285)
83 3jwh_A HEN1; methyltransferase 99.1 5.9E-10 2E-14 102.0 13.4 78 89-176 12-93 (217)
84 3v97_A Ribosomal RNA large sub 99.1 2.1E-09 7.3E-14 117.0 19.8 78 89-176 173-292 (703)
85 3b3j_A Histone-arginine methyl 99.1 4.1E-11 1.4E-15 125.1 6.1 92 71-176 125-216 (480)
86 3bus_A REBM, methyltransferase 99.1 4.6E-09 1.6E-13 99.0 19.5 59 116-176 62-120 (273)
87 1ixk_A Methyltransferase; open 99.1 8.5E-10 2.9E-14 108.6 14.9 146 116-323 119-268 (315)
88 3sm3_A SAM-dependent methyltra 99.1 1.2E-09 4.2E-14 99.7 14.8 58 116-176 31-92 (235)
89 1ve3_A Hypothetical protein PH 99.1 2.6E-09 8.7E-14 97.5 16.9 56 116-176 39-94 (227)
90 3m6w_A RRNA methylase; rRNA me 99.1 6.6E-10 2.2E-14 115.8 14.1 144 116-321 102-249 (464)
91 3hem_A Cyclopropane-fatty-acyl 99.1 3.9E-09 1.3E-13 101.8 18.5 59 116-176 73-131 (302)
92 1inl_A Spermidine synthase; be 99.1 7.7E-10 2.6E-14 108.1 13.5 171 72-328 55-232 (296)
93 3lcc_A Putative methyl chlorid 99.1 9.6E-10 3.3E-14 101.8 13.3 130 117-330 68-207 (235)
94 3gu3_A Methyltransferase; alph 99.1 2.2E-09 7.5E-14 102.9 16.1 74 92-176 7-81 (284)
95 3m33_A Uncharacterized protein 99.1 1.1E-09 3.6E-14 101.6 13.4 139 82-328 26-165 (226)
96 2ipx_A RRNA 2'-O-methyltransfe 99.1 2.8E-09 9.6E-14 99.0 16.2 57 116-176 78-135 (233)
97 3bwc_A Spermidine synthase; SA 99.1 1.4E-09 4.9E-14 106.5 14.8 175 72-330 60-240 (304)
98 2okc_A Type I restriction enzy 99.1 1.2E-09 4.1E-14 112.3 14.8 60 116-176 172-245 (445)
99 3mgg_A Methyltransferase; NYSG 99.1 3E-09 1E-13 100.6 16.3 59 116-176 38-96 (276)
100 3cgg_A SAM-dependent methyltra 99.1 2.5E-09 8.6E-14 94.4 14.6 127 116-330 47-175 (195)
101 1i9g_A Hypothetical protein RV 99.1 2E-09 6.7E-14 102.3 14.7 129 116-331 100-231 (280)
102 3vc1_A Geranyl diphosphate 2-C 99.1 3.7E-09 1.3E-13 102.7 16.7 59 116-176 118-176 (312)
103 3ajd_A Putative methyltransfer 99.1 8E-10 2.8E-14 106.3 11.7 143 116-320 84-230 (274)
104 3g2m_A PCZA361.24; SAM-depende 99.0 1.9E-09 6.5E-14 103.8 14.2 57 117-176 84-142 (299)
105 3d2l_A SAM-dependent methyltra 99.0 5.1E-09 1.7E-13 96.5 15.5 54 117-176 35-88 (243)
106 1vl5_A Unknown conserved prote 99.0 1.3E-08 4.6E-13 95.5 18.5 57 116-176 38-94 (260)
107 2o57_A Putative sarcosine dime 99.0 1.1E-08 3.9E-13 97.8 18.3 59 116-176 83-141 (297)
108 3ntv_A MW1564 protein; rossman 99.0 2.3E-09 7.9E-14 100.1 13.0 60 116-176 72-131 (232)
109 3ujc_A Phosphoethanolamine N-m 99.0 5E-09 1.7E-13 97.6 15.3 129 116-329 56-205 (266)
110 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.4E-09 4.7E-14 113.1 12.3 146 116-322 106-255 (456)
111 1fbn_A MJ fibrillarin homologu 99.0 1.9E-08 6.4E-13 93.5 18.9 57 116-176 75-131 (230)
112 3dr5_A Putative O-methyltransf 99.0 2.8E-09 9.5E-14 99.7 13.3 58 117-175 58-117 (221)
113 3h2b_A SAM-dependent methyltra 99.0 1.4E-08 4.9E-13 91.4 17.2 134 116-339 42-190 (203)
114 1ri5_A MRNA capping enzyme; me 99.0 7.4E-09 2.5E-13 98.3 15.9 76 93-176 48-123 (298)
115 3l8d_A Methyltransferase; stru 99.0 1E-08 3.6E-13 94.5 16.5 143 91-333 40-203 (242)
116 3tr6_A O-methyltransferase; ce 99.0 1.5E-09 5.2E-14 99.6 10.7 60 116-176 65-125 (225)
117 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.6E-09 5.4E-14 108.8 11.7 56 117-176 215-270 (369)
118 1iy9_A Spermidine synthase; ro 99.0 6E-09 2.1E-13 100.7 15.3 135 116-329 76-217 (275)
119 2b2c_A Spermidine synthase; be 99.0 3E-09 1E-13 105.2 12.9 171 72-328 73-249 (314)
120 3duw_A OMT, O-methyltransferas 99.0 2.2E-09 7.6E-14 98.5 11.2 60 116-176 59-119 (223)
121 2ex4_A Adrenal gland protein A 99.0 6E-09 2.1E-13 96.9 14.1 131 116-329 80-224 (241)
122 2jjq_A Uncharacterized RNA met 99.0 1.4E-09 4.8E-14 111.8 10.7 88 72-176 258-346 (425)
123 3pfg_A N-methyltransferase; N, 99.0 5.9E-09 2E-13 98.1 13.9 52 116-176 51-102 (263)
124 2vdv_E TRNA (guanine-N(7)-)-me 99.0 3.3E-09 1.1E-13 99.7 12.2 59 116-176 50-116 (246)
125 3g5l_A Putative S-adenosylmeth 99.0 6.4E-09 2.2E-13 97.1 13.9 56 115-176 44-99 (253)
126 1xtp_A LMAJ004091AAA; SGPP, st 99.0 1.5E-08 5.3E-13 94.0 16.5 129 116-329 94-237 (254)
127 3g07_A 7SK snRNA methylphospha 99.0 3.2E-09 1.1E-13 102.7 12.2 47 116-162 47-93 (292)
128 3khk_A Type I restriction-modi 99.0 6.1E-09 2.1E-13 110.4 15.2 152 117-330 246-426 (544)
129 3u81_A Catechol O-methyltransf 99.0 7.7E-09 2.6E-13 95.4 14.1 60 116-176 59-119 (221)
130 1kpg_A CFA synthase;, cyclopro 99.0 2.8E-08 9.4E-13 94.6 18.1 58 116-175 65-122 (287)
131 1g8a_A Fibrillarin-like PRE-rR 99.0 3.8E-08 1.3E-12 90.6 18.5 57 116-176 74-131 (227)
132 2fyt_A Protein arginine N-meth 99.0 6.4E-09 2.2E-13 103.4 13.9 58 116-176 65-122 (340)
133 2fk8_A Methoxy mycolic acid sy 98.9 1.3E-08 4.4E-13 98.6 15.8 58 116-175 91-148 (318)
134 2plw_A Ribosomal RNA methyltra 98.9 1.3E-08 4.3E-13 91.6 14.6 168 116-345 23-197 (201)
135 3m70_A Tellurite resistance pr 98.9 7.2E-09 2.5E-13 98.8 13.7 56 116-176 121-176 (286)
136 3thr_A Glycine N-methyltransfe 98.9 1.7E-08 6E-13 96.1 16.3 74 90-175 41-117 (293)
137 1g6q_1 HnRNP arginine N-methyl 98.9 7.6E-09 2.6E-13 102.1 14.2 58 116-176 39-96 (328)
138 3e8s_A Putative SAM dependent 98.9 6.3E-09 2.2E-13 94.3 12.6 41 116-158 53-93 (227)
139 2h1r_A Dimethyladenosine trans 98.9 1.6E-09 5.6E-14 105.9 9.3 71 93-176 29-99 (299)
140 3q7e_A Protein arginine N-meth 98.9 6.2E-09 2.1E-13 103.8 13.4 59 116-177 67-125 (349)
141 2r3s_A Uncharacterized protein 98.9 1.7E-08 5.8E-13 98.2 16.2 59 116-176 166-224 (335)
142 2dul_A N(2),N(2)-dimethylguano 98.9 2.6E-09 8.7E-14 108.4 10.7 59 116-176 48-121 (378)
143 3ofk_A Nodulation protein S; N 98.9 2E-08 6.8E-13 91.3 15.6 139 116-341 52-200 (216)
144 1qzz_A RDMB, aclacinomycin-10- 98.9 2.1E-08 7.3E-13 99.3 17.0 59 116-176 183-241 (374)
145 3axs_A Probable N(2),N(2)-dime 98.9 4.1E-09 1.4E-13 107.6 12.0 60 116-176 53-114 (392)
146 2frx_A Hypothetical protein YE 98.9 1.1E-08 3.7E-13 106.9 15.2 146 116-322 118-267 (479)
147 2pbf_A Protein-L-isoaspartate 98.9 1E-08 3.5E-13 94.4 13.3 94 71-176 47-149 (227)
148 3r0q_C Probable protein argini 98.9 7.4E-09 2.5E-13 104.3 13.3 58 116-176 64-121 (376)
149 3ckk_A TRNA (guanine-N(7)-)-me 98.9 4.9E-09 1.7E-13 99.0 11.1 132 115-321 46-185 (235)
150 3tfw_A Putative O-methyltransf 98.9 8.5E-09 2.9E-13 97.4 12.6 60 116-176 64-124 (248)
151 3bkx_A SAM-dependent methyltra 98.9 1.1E-08 3.6E-13 96.6 13.3 59 116-175 44-109 (275)
152 2gpy_A O-methyltransferase; st 98.9 5.2E-09 1.8E-13 97.0 10.9 60 116-176 55-114 (233)
153 3tqs_A Ribosomal RNA small sub 98.9 3.8E-09 1.3E-13 101.6 10.2 70 93-177 16-85 (255)
154 2b25_A Hypothetical protein; s 98.9 2.9E-08 9.8E-13 97.6 16.7 120 116-321 106-236 (336)
155 1xxl_A YCGJ protein; structura 98.9 3.6E-08 1.2E-12 91.8 16.5 57 116-176 22-78 (239)
156 3g5t_A Trans-aconitate 3-methy 98.9 2.2E-08 7.5E-13 96.4 15.4 62 116-177 37-99 (299)
157 2avd_A Catechol-O-methyltransf 98.9 3.8E-09 1.3E-13 97.2 9.6 60 116-176 70-130 (229)
158 3bkw_A MLL3908 protein, S-aden 98.9 2.7E-08 9.3E-13 91.6 15.4 54 116-176 44-98 (243)
159 2yxl_A PH0851 protein, 450AA l 98.9 1.5E-08 5.1E-13 104.5 15.1 148 116-323 260-412 (450)
160 1ej0_A FTSJ; methyltransferase 98.9 1.8E-08 6.3E-13 86.9 13.3 150 116-344 23-178 (180)
161 2r6z_A UPF0341 protein in RSP 98.9 2.2E-10 7.4E-15 110.4 1.0 58 116-176 84-148 (258)
162 3dou_A Ribosomal RNA large sub 98.9 1E-08 3.5E-13 93.8 12.1 154 116-347 26-184 (191)
163 1zq9_A Probable dimethyladenos 98.9 4.8E-09 1.6E-13 101.8 10.4 58 116-176 29-86 (285)
164 3s1s_A Restriction endonucleas 98.9 3.4E-09 1.2E-13 116.4 10.3 47 116-162 322-373 (878)
165 1mjf_A Spermidine synthase; sp 98.9 7E-09 2.4E-13 100.4 11.0 132 116-328 76-220 (281)
166 1wzn_A SAM-dependent methyltra 98.9 2.8E-08 9.4E-13 92.5 14.4 73 93-176 25-97 (252)
167 2xvm_A Tellurite resistance pr 98.9 3.4E-08 1.2E-12 87.9 14.3 57 116-176 33-89 (199)
168 3lbf_A Protein-L-isoaspartate 98.9 5.7E-08 2E-12 88.1 15.9 57 116-176 78-134 (210)
169 1sqg_A SUN protein, FMU protei 98.9 1.7E-08 5.8E-13 103.3 13.8 145 116-321 247-394 (429)
170 2kw5_A SLR1183 protein; struct 98.9 3.3E-08 1.1E-12 88.9 14.0 54 118-176 32-85 (202)
171 2o07_A Spermidine synthase; st 98.9 1.7E-08 5.9E-13 99.1 13.0 59 116-175 96-157 (304)
172 2p7i_A Hypothetical protein; p 98.9 6.2E-08 2.1E-12 88.8 15.9 66 95-176 30-95 (250)
173 3gru_A Dimethyladenosine trans 98.9 5.9E-09 2E-13 102.5 9.5 56 116-177 51-106 (295)
174 2qfm_A Spermine synthase; sper 98.8 1.4E-08 4.9E-13 102.6 12.2 177 71-327 154-339 (364)
175 3ll7_A Putative methyltransfer 98.8 1.3E-09 4.3E-14 112.0 4.6 57 116-176 94-152 (410)
176 3ou2_A SAM-dependent methyltra 98.8 1.4E-07 4.8E-12 85.1 17.6 53 116-176 47-99 (218)
177 3fut_A Dimethyladenosine trans 98.8 1.1E-08 3.9E-13 99.3 11.0 93 56-176 5-100 (271)
178 1tw3_A COMT, carminomycin 4-O- 98.8 5.9E-08 2E-12 95.7 16.3 59 116-176 184-242 (360)
179 3lkd_A Type I restriction-modi 98.8 2.8E-08 9.6E-13 105.3 14.8 147 115-322 221-381 (542)
180 2p35_A Trans-aconitate 2-methy 98.8 8.1E-08 2.8E-12 89.4 16.2 54 116-176 34-87 (259)
181 2ar0_A M.ecoki, type I restric 98.8 1.8E-08 6.3E-13 106.5 13.1 60 116-176 170-251 (541)
182 3gjy_A Spermidine synthase; AP 98.8 2E-08 6.7E-13 99.9 12.3 155 92-330 68-228 (317)
183 1x19_A CRTF-related protein; m 98.8 7.8E-08 2.7E-12 95.2 16.6 60 116-177 191-250 (359)
184 3r3h_A O-methyltransferase, SA 98.8 3.5E-09 1.2E-13 100.2 6.4 60 116-176 61-121 (242)
185 2g72_A Phenylethanolamine N-me 98.8 8.7E-08 3E-12 91.7 16.1 45 116-161 72-116 (289)
186 3hnr_A Probable methyltransfer 98.8 3.3E-08 1.1E-12 89.9 12.5 53 116-176 46-98 (220)
187 2pxx_A Uncharacterized protein 98.8 5.1E-08 1.8E-12 87.7 13.6 133 116-322 43-175 (215)
188 2y1w_A Histone-arginine methyl 98.8 2.5E-08 8.6E-13 99.2 12.4 58 116-176 51-108 (348)
189 1sui_A Caffeoyl-COA O-methyltr 98.8 2.5E-08 8.6E-13 94.6 11.6 60 116-176 80-140 (247)
190 3ccf_A Cyclopropane-fatty-acyl 98.8 7.1E-08 2.4E-12 91.7 14.7 52 116-176 58-109 (279)
191 2b9e_A NOL1/NOP2/SUN domain fa 98.8 8.3E-08 2.8E-12 94.7 15.3 146 116-321 103-254 (309)
192 1qam_A ERMC' methyltransferase 98.8 1.4E-08 4.7E-13 96.3 9.1 55 116-176 31-85 (244)
193 1zx0_A Guanidinoacetate N-meth 98.8 3.6E-08 1.2E-12 91.6 11.7 57 116-176 61-117 (236)
194 3c3p_A Methyltransferase; NP_9 98.8 1.6E-08 5.6E-13 92.2 9.1 59 116-175 57-116 (210)
195 2hnk_A SAM-dependent O-methylt 98.8 4.2E-08 1.4E-12 91.5 11.9 60 116-176 61-121 (239)
196 1nt2_A Fibrillarin-like PRE-rR 98.8 5.1E-07 1.8E-11 83.5 19.2 57 116-176 58-114 (210)
197 2yxe_A Protein-L-isoaspartate 98.8 1.1E-07 3.8E-12 86.4 14.3 84 77-175 52-136 (215)
198 2p8j_A S-adenosylmethionine-de 98.8 6.3E-08 2.2E-12 87.2 12.5 73 91-176 8-80 (209)
199 3fpf_A Mtnas, putative unchara 98.8 1.1E-08 3.8E-13 100.9 8.1 87 81-176 95-181 (298)
200 1uir_A Polyamine aminopropyltr 98.8 4.4E-08 1.5E-12 96.4 12.2 137 116-327 78-222 (314)
201 3fzg_A 16S rRNA methylase; met 98.8 1.3E-08 4.3E-13 95.0 7.8 55 116-171 50-104 (200)
202 4hc4_A Protein arginine N-meth 98.8 2E-08 6.9E-13 102.0 10.0 58 116-176 84-141 (376)
203 3mcz_A O-methyltransferase; ad 98.8 1.4E-07 4.8E-12 92.8 15.6 60 116-177 180-239 (352)
204 3dli_A Methyltransferase; PSI- 98.8 6.2E-08 2.1E-12 89.9 12.4 41 116-158 42-82 (240)
205 2a14_A Indolethylamine N-methy 98.7 3.5E-08 1.2E-12 93.7 10.8 65 94-162 37-101 (263)
206 3uwp_A Histone-lysine N-methyl 98.7 1.6E-08 5.5E-13 104.1 8.7 61 116-177 174-242 (438)
207 2yqz_A Hypothetical protein TT 98.7 1.4E-07 4.7E-12 87.8 14.4 56 116-176 40-95 (263)
208 3ege_A Putative methyltransfer 98.7 5.7E-08 2E-12 91.7 11.8 65 93-176 21-85 (261)
209 1m6y_A S-adenosyl-methyltransf 98.7 1.5E-08 5.1E-13 99.9 8.0 58 116-176 27-84 (301)
210 3gwz_A MMCR; methyltransferase 98.7 3.7E-07 1.3E-11 91.2 18.1 59 116-176 203-261 (369)
211 1i1n_A Protein-L-isoaspartate 98.7 4E-08 1.4E-12 90.3 10.1 60 116-176 78-142 (226)
212 1pjz_A Thiopurine S-methyltran 98.7 3.6E-08 1.2E-12 90.2 9.6 59 116-176 23-91 (203)
213 4df3_A Fibrillarin-like rRNA/T 98.7 3.3E-07 1.1E-11 87.3 16.4 130 116-330 78-217 (233)
214 2i62_A Nicotinamide N-methyltr 98.7 4.5E-08 1.5E-12 91.2 10.1 46 116-162 57-102 (265)
215 3c3y_A Pfomt, O-methyltransfer 98.7 3.7E-08 1.3E-12 92.5 9.5 60 116-176 71-131 (237)
216 1dl5_A Protein-L-isoaspartate 98.7 9.5E-08 3.2E-12 93.5 12.6 59 116-176 76-135 (317)
217 1jg1_A PIMT;, protein-L-isoasp 98.7 1.9E-07 6.6E-12 86.7 14.1 84 76-175 65-148 (235)
218 3orh_A Guanidinoacetate N-meth 98.7 5.5E-08 1.9E-12 91.3 10.5 68 94-175 49-116 (236)
219 3i9f_A Putative type 11 methyl 98.7 1.9E-07 6.4E-12 81.7 13.1 119 116-330 18-148 (170)
220 2i7c_A Spermidine synthase; tr 98.7 3.5E-07 1.2E-11 88.5 16.3 61 116-176 79-141 (283)
221 3i53_A O-methyltransferase; CO 98.7 3.9E-07 1.3E-11 89.1 16.7 59 116-176 170-228 (332)
222 2ip2_A Probable phenazine-spec 98.7 8E-08 2.7E-12 93.8 11.4 58 117-176 169-226 (334)
223 1yub_A Ermam, rRNA methyltrans 98.7 1.6E-09 5.6E-14 102.2 -0.8 55 116-176 30-84 (245)
224 3uzu_A Ribosomal RNA small sub 98.7 5.3E-08 1.8E-12 94.9 9.6 70 93-177 29-100 (279)
225 2nyu_A Putative ribosomal RNA 98.7 1.5E-07 5.2E-12 84.0 11.8 154 116-346 23-189 (196)
226 3cbg_A O-methyltransferase; cy 98.7 3.9E-08 1.3E-12 91.8 8.0 59 116-175 73-132 (232)
227 1af7_A Chemotaxis receptor met 98.7 3.5E-08 1.2E-12 95.9 7.7 44 116-159 106-157 (274)
228 3dp7_A SAM-dependent methyltra 98.6 2.2E-07 7.5E-12 92.6 13.5 60 116-177 180-239 (363)
229 3p2e_A 16S rRNA methylase; met 98.6 4.3E-08 1.5E-12 91.8 7.8 59 116-176 25-87 (225)
230 1vbf_A 231AA long hypothetical 98.6 3.7E-07 1.3E-11 83.9 13.0 82 76-176 44-125 (231)
231 3ftd_A Dimethyladenosine trans 98.6 7.8E-08 2.7E-12 91.9 8.4 69 93-177 18-86 (249)
232 1vlm_A SAM-dependent methyltra 98.6 1E-06 3.5E-11 80.7 15.3 46 116-176 48-93 (219)
233 1qyr_A KSGA, high level kasuga 98.6 2.7E-08 9.3E-13 95.4 4.5 69 93-176 8-76 (252)
234 2bm8_A Cephalosporin hydroxyla 98.6 6.7E-08 2.3E-12 91.1 7.0 77 81-176 59-139 (236)
235 3cc8_A Putative methyltransfer 98.6 7.4E-07 2.5E-11 80.7 13.5 41 116-158 33-73 (230)
236 3mq2_A 16S rRNA methyltransfer 98.6 5.2E-07 1.8E-11 82.3 12.1 59 116-176 28-90 (218)
237 3id6_C Fibrillarin-like rRNA/T 98.5 3.1E-06 1E-10 80.4 17.8 130 116-330 77-216 (232)
238 2gb4_A Thiopurine S-methyltran 98.5 9.9E-07 3.4E-11 84.2 14.0 42 116-159 69-110 (252)
239 3lcv_B Sisomicin-gentamicin re 98.5 1.2E-07 4.2E-12 92.2 7.5 97 53-176 90-190 (281)
240 2xyq_A Putative 2'-O-methyl tr 98.5 3.8E-07 1.3E-11 89.5 11.1 93 240-347 122-214 (290)
241 4azs_A Methyltransferase WBDD; 98.5 1.7E-07 5.8E-12 99.3 8.6 118 16-175 5-122 (569)
242 3bxo_A N,N-dimethyltransferase 98.5 2.2E-06 7.5E-11 78.5 15.0 52 116-176 41-92 (239)
243 2aot_A HMT, histamine N-methyl 98.5 3.3E-06 1.1E-10 81.1 16.7 56 116-172 53-114 (292)
244 2oyr_A UPF0341 protein YHIQ; a 98.5 8.5E-08 2.9E-12 92.6 5.5 58 117-176 90-154 (258)
245 1r18_A Protein-L-isoaspartate( 98.5 6.5E-07 2.2E-11 82.6 11.2 60 116-176 85-154 (227)
246 1u2z_A Histone-lysine N-methyl 98.5 6E-07 2.1E-11 92.7 11.9 59 116-175 243-309 (433)
247 3ggd_A SAM-dependent methyltra 98.4 6.7E-07 2.3E-11 82.9 9.4 55 116-177 57-111 (245)
248 3bgv_A MRNA CAP guanine-N7 met 98.4 1.5E-06 5.1E-11 84.1 12.2 60 116-176 35-99 (313)
249 1p91_A Ribosomal RNA large sub 98.4 4.2E-07 1.4E-11 85.6 7.9 54 116-176 86-139 (269)
250 4hg2_A Methyltransferase type 98.4 4.9E-07 1.7E-11 86.7 8.4 68 86-176 23-90 (257)
251 3iv6_A Putative Zn-dependent a 98.4 6.3E-07 2.2E-11 86.6 8.5 45 116-162 46-90 (261)
252 2gs9_A Hypothetical protein TT 98.4 1.5E-06 5.2E-11 78.5 10.5 48 116-175 37-85 (211)
253 4e2x_A TCAB9; kijanose, tetron 98.4 9.4E-07 3.2E-11 89.1 10.0 41 116-158 108-148 (416)
254 2qe6_A Uncharacterized protein 98.3 9.1E-06 3.1E-10 78.2 15.1 57 117-177 79-138 (274)
255 3htx_A HEN1; HEN1, small RNA m 98.3 1.3E-06 4.4E-11 96.5 9.3 76 92-177 707-788 (950)
256 2avn_A Ubiquinone/menaquinone 98.3 3.4E-06 1.2E-10 79.3 10.3 43 116-160 55-97 (260)
257 3ufb_A Type I restriction-modi 98.2 4.5E-06 1.5E-10 88.1 11.2 58 116-175 218-288 (530)
258 2vdw_A Vaccinia virus capping 98.2 8.5E-06 2.9E-10 79.7 12.1 59 116-176 49-112 (302)
259 3lst_A CALO1 methyltransferase 98.2 4.8E-06 1.6E-10 82.2 10.2 57 116-176 185-241 (348)
260 3frh_A 16S rRNA methylase; met 98.2 4.2E-06 1.4E-10 80.5 9.1 56 115-176 105-160 (253)
261 2cmg_A Spermidine synthase; tr 98.2 2.7E-06 9.4E-11 81.7 7.8 58 116-175 73-132 (262)
262 2zfu_A Nucleomethylin, cerebra 98.2 9.7E-06 3.3E-10 73.5 10.9 106 116-326 68-175 (215)
263 1fp1_D Isoliquiritigenin 2'-O- 98.1 2.6E-05 8.8E-10 77.6 13.2 52 116-176 210-261 (372)
264 3opn_A Putative hemolysin; str 98.1 1.9E-06 6.6E-11 81.2 4.7 43 116-159 38-80 (232)
265 1fp2_A Isoflavone O-methyltran 98.1 2.2E-05 7.5E-10 77.5 12.5 52 116-176 189-240 (352)
266 3reo_A (ISO)eugenol O-methyltr 98.1 2.7E-05 9.2E-10 77.7 12.5 52 116-176 204-255 (368)
267 2oxt_A Nucleoside-2'-O-methylt 98.0 3.9E-06 1.3E-10 80.8 5.3 49 89-149 56-105 (265)
268 4a6d_A Hydroxyindole O-methylt 98.0 0.00011 3.9E-09 72.9 15.5 59 116-177 180-238 (353)
269 2wa2_A Non-structural protein 98.0 5.3E-06 1.8E-10 80.4 5.3 49 89-149 64-113 (276)
270 3hp7_A Hemolysin, putative; st 97.9 3.5E-05 1.2E-09 75.7 10.5 41 116-157 86-126 (291)
271 1zg3_A Isoflavanone 4'-O-methy 97.9 5.9E-05 2E-09 74.5 11.8 52 116-176 194-245 (358)
272 4gqb_A Protein arginine N-meth 97.8 4.5E-05 1.5E-09 82.2 9.5 61 115-177 357-421 (637)
273 3p9c_A Caffeic acid O-methyltr 97.8 0.00012 4.2E-09 72.9 11.5 52 116-176 202-253 (364)
274 2ld4_A Anamorsin; methyltransf 97.5 0.00057 2E-08 59.9 10.1 107 116-322 13-128 (176)
275 3giw_A Protein of unknown func 97.5 0.00023 7.8E-09 69.4 8.2 59 117-177 80-141 (277)
276 2k4m_A TR8_protein, UPF0146 pr 97.5 9E-05 3.1E-09 66.1 4.6 37 116-153 36-73 (153)
277 3sso_A Methyltransferase; macr 97.4 6.7E-05 2.3E-09 77.0 4.2 51 115-176 216-273 (419)
278 2p41_A Type II methyltransfera 97.4 8.9E-05 3.1E-09 72.7 4.3 29 116-147 83-111 (305)
279 3cvo_A Methyltransferase-like 97.2 0.0016 5.5E-08 60.6 10.4 72 91-177 17-90 (202)
280 2zig_A TTHA0409, putative modi 97.2 0.00095 3.2E-08 64.7 8.8 45 116-162 236-280 (297)
281 1wg8_A Predicted S-adenosylmet 97.1 0.0006 2.1E-08 66.7 6.9 53 116-176 23-75 (285)
282 3ua3_A Protein arginine N-meth 97.1 0.00032 1.1E-08 76.4 5.3 60 116-177 410-482 (745)
283 4fzv_A Putative methyltransfer 96.8 0.0031 1.1E-07 63.4 9.2 145 116-320 149-303 (359)
284 3o4f_A Spermidine synthase; am 96.8 0.037 1.3E-06 54.2 15.9 63 115-177 83-148 (294)
285 2qy6_A UPF0209 protein YFCK; s 96.7 0.0092 3.1E-07 57.1 11.0 46 116-161 61-132 (257)
286 2zig_A TTHA0409, putative modi 96.6 0.0023 7.8E-08 62.0 5.9 81 239-325 38-131 (297)
287 2oo3_A Protein involved in cat 96.3 0.0053 1.8E-07 60.0 6.7 53 118-176 94-146 (283)
288 1g60_A Adenine-specific methyl 96.2 0.011 3.6E-07 56.1 8.0 46 116-163 213-258 (260)
289 1i4w_A Mitochondrial replicati 95.3 0.03 1E-06 56.2 7.5 57 116-177 59-115 (353)
290 3c6k_A Spermine synthase; sper 95.2 0.049 1.7E-06 55.2 8.4 136 116-320 206-350 (381)
291 2c7p_A Modification methylase 94.2 0.076 2.6E-06 52.4 7.0 43 116-160 11-54 (327)
292 2wk1_A NOVP; transferase, O-me 93.7 0.084 2.9E-06 51.3 6.1 78 90-176 89-198 (282)
293 2py6_A Methyltransferase FKBM; 93.4 0.19 6.4E-06 50.9 8.2 61 115-175 226-290 (409)
294 1boo_A Protein (N-4 cytosine-s 91.7 0.35 1.2E-05 47.3 7.4 75 239-325 31-115 (323)
295 1g55_A DNA cytosine methyltran 91.1 0.25 8.4E-06 48.9 5.7 43 116-160 2-47 (343)
296 3tka_A Ribosomal RNA small sub 91.0 0.25 8.6E-06 49.4 5.6 55 116-176 58-113 (347)
297 4auk_A Ribosomal RNA large sub 90.2 1 3.4E-05 45.6 9.3 50 116-176 212-261 (375)
298 3g7u_A Cytosine-specific methy 90.0 0.38 1.3E-05 48.3 6.0 41 117-159 3-44 (376)
299 3qv2_A 5-cytosine DNA methyltr 88.7 0.55 1.9E-05 46.3 5.9 43 115-159 9-55 (327)
300 1g60_A Adenine-specific methyl 87.8 1.3 4.3E-05 41.6 7.7 72 239-323 21-92 (260)
301 1boo_A Protein (N-4 cytosine-s 86.3 0.78 2.7E-05 44.7 5.4 45 116-162 253-297 (323)
302 2efj_A 3,7-dimethylxanthine me 85.4 2.8 9.6E-05 42.3 9.1 21 116-136 53-73 (384)
303 2qrv_A DNA (cytosine-5)-methyl 85.2 1.2 4.2E-05 43.2 6.1 43 115-159 15-60 (295)
304 1eg2_A Modification methylase 83.3 1.1 3.9E-05 43.7 5.0 46 116-163 243-291 (319)
305 4h0n_A DNMT2; SAH binding, tra 83.1 1.4 4.8E-05 43.4 5.6 42 116-159 3-47 (333)
306 3me5_A Cytosine-specific methy 82.7 2 6.7E-05 44.7 6.7 43 115-159 87-130 (482)
307 3ubt_Y Modification methylase 79.2 1.6 5.3E-05 42.0 4.3 39 118-158 2-41 (331)
308 1eg2_A Modification methylase 76.5 13 0.00044 36.1 10.1 70 239-323 56-133 (319)
309 3swr_A DNA (cytosine-5)-methyl 65.4 7.3 0.00025 44.0 6.1 43 114-158 538-582 (1002)
310 3gcz_A Polyprotein; flavivirus 61.6 4.3 0.00015 39.4 2.9 34 117-150 92-125 (282)
311 4g81_D Putative hexonate dehyd 61.5 9.8 0.00034 35.9 5.4 57 117-177 10-68 (255)
312 3evf_A RNA-directed RNA polyme 61.1 4.5 0.00015 39.2 2.9 44 286-330 165-211 (277)
313 4dkj_A Cytosine-specific methy 60.4 10 0.00034 38.4 5.5 45 116-160 10-59 (403)
314 3b5i_A S-adenosyl-L-methionine 60.3 16 0.00055 36.6 6.9 48 115-176 52-99 (374)
315 2dph_A Formaldehyde dismutase; 56.4 15 0.00052 36.1 6.0 40 116-156 186-227 (398)
316 3t4x_A Oxidoreductase, short c 54.6 17 0.00057 33.5 5.6 59 117-177 11-71 (267)
317 3rku_A Oxidoreductase YMR226C; 54.6 21 0.00072 33.5 6.4 59 117-177 34-97 (287)
318 1f8f_A Benzyl alcohol dehydrog 53.5 22 0.00075 34.4 6.5 41 116-157 191-233 (371)
319 3jv7_A ADH-A; dehydrogenase, n 52.2 24 0.00084 33.7 6.6 42 116-157 172-214 (345)
320 4fn4_A Short chain dehydrogena 51.6 58 0.002 30.4 8.9 57 117-177 8-66 (254)
321 3eld_A Methyltransferase; flav 50.9 14 0.00048 36.1 4.5 34 116-149 82-115 (300)
322 1m6e_X S-adenosyl-L-methionnin 50.8 2.3 7.8E-05 42.6 -1.1 17 115-131 51-67 (359)
323 3lkz_A Non-structural protein 49.4 7.4 0.00025 38.3 2.3 32 117-149 96-128 (321)
324 3p8z_A Mtase, non-structural p 48.9 9.6 0.00033 36.5 2.9 54 86-149 57-112 (267)
325 3o38_A Short chain dehydrogena 48.5 60 0.0021 29.3 8.4 58 117-177 23-83 (266)
326 3av4_A DNA (cytosine-5)-methyl 48.5 21 0.00071 41.6 6.1 42 115-158 850-893 (1330)
327 3ioy_A Short-chain dehydrogena 47.5 58 0.002 30.9 8.4 59 117-177 9-69 (319)
328 3s2e_A Zinc-containing alcohol 46.7 82 0.0028 29.8 9.3 74 76-157 125-208 (340)
329 1kol_A Formaldehyde dehydrogen 46.3 33 0.0011 33.5 6.5 40 117-157 187-228 (398)
330 3o26_A Salutaridine reductase; 46.0 64 0.0022 29.5 8.2 59 116-177 12-72 (311)
331 3qiv_A Short-chain dehydrogena 45.9 81 0.0028 28.2 8.7 58 116-177 9-68 (253)
332 3ucx_A Short chain dehydrogena 45.4 92 0.0031 28.3 9.1 58 116-177 11-70 (264)
333 3h7a_A Short chain dehydrogena 45.0 49 0.0017 30.1 7.1 57 117-177 8-66 (252)
334 3vyw_A MNMC2; tRNA wobble urid 44.6 1.8E+02 0.0061 28.3 11.3 57 271-341 201-257 (308)
335 3tjr_A Short chain dehydrogena 44.5 86 0.0029 29.3 9.0 58 116-177 31-90 (301)
336 3mi6_A Alpha-galactosidase; NE 43.8 55 0.0019 35.8 8.3 91 51-149 447-552 (745)
337 1e7w_A Pteridine reductase; di 43.4 76 0.0026 29.5 8.3 57 117-177 10-70 (291)
338 3svt_A Short-chain type dehydr 43.0 96 0.0033 28.4 8.9 60 117-177 12-73 (281)
339 3f9i_A 3-oxoacyl-[acyl-carrier 42.2 42 0.0014 30.0 6.2 56 115-177 13-70 (249)
340 3rkr_A Short chain oxidoreduct 42.1 83 0.0028 28.5 8.2 57 117-177 30-88 (262)
341 1jvb_A NAD(H)-dependent alcoho 41.9 44 0.0015 31.9 6.5 41 116-157 171-214 (347)
342 4ft4_B DNA (cytosine-5)-methyl 41.3 16 0.00055 39.5 3.6 43 115-159 211-260 (784)
343 1rjd_A PPM1P, carboxy methyl t 41.3 44 0.0015 32.6 6.5 46 116-162 98-143 (334)
344 1zkd_A DUF185; NESG, RPR58, st 40.9 49 0.0017 33.3 6.9 53 116-172 81-140 (387)
345 3iht_A S-adenosyl-L-methionine 40.8 45 0.0015 29.9 5.7 45 93-147 28-72 (174)
346 4fgs_A Probable dehydrogenase 40.3 41 0.0014 31.9 5.9 55 116-177 29-85 (273)
347 3ek2_A Enoyl-(acyl-carrier-pro 40.2 29 0.001 31.4 4.7 59 115-177 13-74 (271)
348 1wma_A Carbonyl reductase [NAD 40.0 95 0.0032 27.6 8.2 57 117-177 5-64 (276)
349 3gaf_A 7-alpha-hydroxysteroid 39.8 1E+02 0.0034 27.9 8.4 57 117-177 13-71 (256)
350 3tfo_A Putative 3-oxoacyl-(acy 39.8 92 0.0031 28.6 8.2 57 117-177 5-63 (264)
351 4eez_A Alcohol dehydrogenase 1 39.5 51 0.0017 31.2 6.6 41 117-157 165-206 (348)
352 3v8b_A Putative dehydrogenase, 39.1 1E+02 0.0035 28.5 8.5 57 117-177 29-87 (283)
353 2qhx_A Pteridine reductase 1; 38.9 93 0.0032 29.6 8.3 57 117-177 47-107 (328)
354 3imf_A Short chain dehydrogena 38.6 75 0.0026 28.8 7.3 57 117-177 7-65 (257)
355 1xg5_A ARPG836; short chain de 38.5 1.3E+02 0.0046 27.2 9.1 59 117-177 33-93 (279)
356 3sju_A Keto reductase; short-c 37.4 1.2E+02 0.0039 28.0 8.5 57 117-177 25-83 (279)
357 3lyl_A 3-oxoacyl-(acyl-carrier 37.2 1.2E+02 0.0041 26.9 8.4 57 117-177 6-64 (247)
358 3lf2_A Short chain oxidoreduct 37.2 1.5E+02 0.005 26.9 9.1 59 116-177 8-69 (265)
359 3ado_A Lambda-crystallin; L-gu 36.2 52 0.0018 32.0 6.1 43 117-161 7-51 (319)
360 3awd_A GOX2181, putative polyo 36.1 1.5E+02 0.0053 26.2 9.0 57 117-177 14-72 (260)
361 1yb1_A 17-beta-hydroxysteroid 35.9 1.5E+02 0.0051 26.9 9.0 57 117-177 32-90 (272)
362 3nyw_A Putative oxidoreductase 35.7 1.3E+02 0.0043 27.2 8.4 61 116-177 7-69 (250)
363 3rd5_A Mypaa.01249.C; ssgcid, 35.5 62 0.0021 29.9 6.3 55 116-177 16-72 (291)
364 2rhc_B Actinorhodin polyketide 35.1 1.5E+02 0.0052 27.0 8.9 57 117-177 23-81 (277)
365 2jah_A Clavulanic acid dehydro 35.0 1.6E+02 0.0056 26.2 9.0 57 117-177 8-66 (247)
366 1fmc_A 7 alpha-hydroxysteroid 34.9 1E+02 0.0035 27.3 7.5 57 117-177 12-70 (255)
367 3pxx_A Carveol dehydrogenase; 34.5 1.6E+02 0.0055 26.6 9.0 58 116-177 10-81 (287)
368 3t7c_A Carveol dehydrogenase; 34.1 1.6E+02 0.0054 27.3 9.0 58 116-177 28-99 (299)
369 2nwq_A Probable short-chain de 33.4 42 0.0014 31.1 4.7 56 117-177 22-79 (272)
370 4f3n_A Uncharacterized ACR, CO 33.4 35 0.0012 34.9 4.4 69 95-172 126-200 (432)
371 3uve_A Carveol dehydrogenase ( 33.4 1.6E+02 0.0054 26.9 8.8 58 116-177 11-86 (286)
372 3pk0_A Short-chain dehydrogena 32.8 1.4E+02 0.0046 27.1 8.1 58 117-177 11-70 (262)
373 4dvj_A Putative zinc-dependent 32.8 63 0.0021 31.2 6.1 41 117-157 173-215 (363)
374 1zem_A Xylitol dehydrogenase; 32.7 1.7E+02 0.0058 26.3 8.8 57 117-177 8-66 (262)
375 2ae2_A Protein (tropinone redu 32.7 1.8E+02 0.006 26.2 8.8 57 117-177 10-68 (260)
376 1wey_A Calcipressin 1; structu 32.6 19 0.00066 29.8 1.9 62 28-90 26-97 (104)
377 3pgx_A Carveol dehydrogenase; 31.9 1.7E+02 0.006 26.6 8.8 58 116-177 15-87 (280)
378 1iy8_A Levodione reductase; ox 31.7 1.7E+02 0.0058 26.3 8.6 59 117-177 14-74 (267)
379 1yxm_A Pecra, peroxisomal tran 31.6 1.9E+02 0.0066 26.4 9.1 60 117-177 19-82 (303)
380 3sx2_A Putative 3-ketoacyl-(ac 31.6 1.6E+02 0.0054 26.7 8.4 58 116-177 13-84 (278)
381 1xkq_A Short-chain reductase f 31.4 1.1E+02 0.0037 28.0 7.2 60 117-177 7-68 (280)
382 4egf_A L-xylulose reductase; s 31.2 1E+02 0.0035 28.0 7.0 58 117-177 21-80 (266)
383 3tox_A Short chain dehydrogena 30.9 90 0.0031 28.9 6.6 57 117-177 9-67 (280)
384 1ae1_A Tropinone reductase-I; 30.9 2E+02 0.0069 26.0 9.0 57 117-177 22-80 (273)
385 3iup_A Putative NADPH:quinone 30.8 58 0.002 31.7 5.5 41 117-157 172-214 (379)
386 1pl8_A Human sorbitol dehydrog 30.6 84 0.0029 30.1 6.5 40 117-157 173-214 (356)
387 1p65_A Nucleocapsid protein; v 30.4 37 0.0013 25.8 3.0 42 378-419 25-69 (73)
388 2qq5_A DHRS1, dehydrogenase/re 30.1 1.4E+02 0.0047 26.9 7.6 57 117-177 6-64 (260)
389 1oaa_A Sepiapterin reductase; 29.9 1.1E+02 0.0037 27.5 6.9 59 117-177 7-70 (259)
390 3l77_A Short-chain alcohol deh 29.7 1.5E+02 0.0052 25.9 7.7 57 118-177 4-62 (235)
391 3tsc_A Putative oxidoreductase 29.4 2.2E+02 0.0075 25.8 9.0 58 116-177 11-83 (277)
392 3r1i_A Short-chain type dehydr 29.2 1.1E+02 0.0039 28.1 7.0 57 117-177 33-91 (276)
393 3ppi_A 3-hydroxyacyl-COA dehyd 28.9 1.7E+02 0.0059 26.5 8.2 54 117-177 31-86 (281)
394 1geg_A Acetoin reductase; SDR 28.6 1.4E+02 0.0049 26.7 7.4 56 118-177 4-61 (256)
395 1y1p_A ARII, aldehyde reductas 28.5 1.4E+02 0.0048 27.4 7.5 58 117-177 12-72 (342)
396 4imr_A 3-oxoacyl-(acyl-carrier 28.5 90 0.0031 28.8 6.1 57 117-177 34-92 (275)
397 4fc7_A Peroxisomal 2,4-dienoyl 28.3 1.6E+02 0.0055 26.9 7.8 59 116-177 27-87 (277)
398 3ftp_A 3-oxoacyl-[acyl-carrier 28.3 1.4E+02 0.0046 27.4 7.3 57 117-177 29-87 (270)
399 4ibo_A Gluconate dehydrogenase 28.1 1.2E+02 0.0042 27.8 7.0 57 117-177 27-85 (271)
400 1xu9_A Corticosteroid 11-beta- 27.9 1.6E+02 0.0056 26.8 7.8 58 117-177 29-88 (286)
401 4da9_A Short-chain dehydrogena 27.9 2.4E+02 0.0081 25.8 9.0 58 116-177 29-89 (280)
402 3cxt_A Dehydrogenase with diff 27.9 2.1E+02 0.0071 26.5 8.6 57 117-177 35-93 (291)
403 1xhl_A Short-chain dehydrogena 27.8 1.4E+02 0.0048 27.7 7.4 60 117-177 27-88 (297)
404 1pqw_A Polyketide synthase; ro 27.5 76 0.0026 27.3 5.1 40 116-156 39-80 (198)
405 2zat_A Dehydrogenase/reductase 27.3 1.5E+02 0.0053 26.5 7.4 57 117-177 15-73 (260)
406 1spx_A Short-chain reductase f 27.3 1.6E+02 0.0054 26.7 7.5 60 117-177 7-68 (278)
407 3asu_A Short-chain dehydrogena 27.3 77 0.0026 28.6 5.3 52 119-177 3-56 (248)
408 3uog_A Alcohol dehydrogenase; 27.1 1.1E+02 0.0037 29.4 6.6 41 116-157 190-231 (363)
409 3ai3_A NADPH-sorbose reductase 26.5 2.2E+02 0.0077 25.4 8.4 58 117-177 8-67 (263)
410 3fwz_A Inner membrane protein 26.5 1.5E+02 0.0053 24.1 6.7 50 116-176 7-58 (140)
411 4dry_A 3-oxoacyl-[acyl-carrier 26.4 1.3E+02 0.0045 27.7 6.9 58 117-177 34-93 (281)
412 3i1j_A Oxidoreductase, short c 26.3 1.9E+02 0.0067 25.4 7.8 58 116-176 14-73 (247)
413 1xq1_A Putative tropinone redu 26.3 1.7E+02 0.0057 26.2 7.4 57 117-177 15-73 (266)
414 3llv_A Exopolyphosphatase-rela 26.1 1.1E+02 0.0038 24.7 5.7 38 117-156 7-46 (141)
415 3s55_A Putative short-chain de 25.6 2.7E+02 0.0091 25.2 8.8 58 116-177 10-81 (281)
416 4iin_A 3-ketoacyl-acyl carrier 25.5 2.7E+02 0.0092 25.1 8.8 57 117-177 30-89 (271)
417 3oec_A Carveol dehydrogenase ( 25.4 2.2E+02 0.0076 26.6 8.4 57 117-177 47-117 (317)
418 1e3j_A NADP(H)-dependent ketos 25.3 1.2E+02 0.0041 28.9 6.5 39 117-156 170-209 (352)
419 2h6e_A ADH-4, D-arabinose 1-de 24.7 1.1E+02 0.0039 28.9 6.2 41 117-157 172-214 (344)
420 2gdz_A NAD+-dependent 15-hydro 24.6 2.5E+02 0.0084 25.2 8.3 59 117-177 8-68 (267)
421 1ja9_A 4HNR, 1,3,6,8-tetrahydr 24.4 1.9E+02 0.0065 25.7 7.4 57 117-177 22-81 (274)
422 3f1l_A Uncharacterized oxidore 24.3 1.8E+02 0.0061 26.1 7.2 57 117-176 13-71 (252)
423 3fpc_A NADP-dependent alcohol 24.1 1.2E+02 0.004 28.9 6.2 40 117-157 168-209 (352)
424 2uvd_A 3-oxoacyl-(acyl-carrier 23.6 2E+02 0.0069 25.5 7.4 57 117-177 5-64 (246)
425 2cfc_A 2-(R)-hydroxypropyl-COM 23.5 1.6E+02 0.0053 26.0 6.6 57 118-177 4-62 (250)
426 4eue_A Putative reductase CA_C 23.2 75 0.0026 32.1 4.7 58 116-177 60-133 (418)
427 1w6u_A 2,4-dienoyl-COA reducta 23.2 2.7E+02 0.0093 25.3 8.4 58 117-177 27-86 (302)
428 3v2h_A D-beta-hydroxybutyrate 23.2 2.7E+02 0.0093 25.4 8.4 58 117-177 26-86 (281)
429 1vl8_A Gluconate 5-dehydrogena 23.2 2.8E+02 0.0095 25.1 8.4 57 117-177 22-81 (267)
430 1gee_A Glucose 1-dehydrogenase 23.1 1.9E+02 0.0066 25.6 7.2 57 117-177 8-67 (261)
431 4eso_A Putative oxidoreductase 22.7 2.7E+02 0.0094 24.9 8.2 54 117-177 9-64 (255)
432 3qwb_A Probable quinone oxidor 22.5 1.2E+02 0.0043 28.4 6.0 41 116-157 149-191 (334)
433 1uuf_A YAHK, zinc-type alcohol 22.4 97 0.0033 30.0 5.3 40 117-157 196-236 (369)
434 3rih_A Short chain dehydrogena 22.2 1.4E+02 0.0048 27.9 6.2 58 117-177 42-101 (293)
435 1rjw_A ADH-HT, alcohol dehydro 22.1 1.6E+02 0.0054 27.9 6.6 39 117-156 166-205 (339)
436 2pnf_A 3-oxoacyl-[acyl-carrier 22.0 1.6E+02 0.0054 25.9 6.2 58 117-177 8-67 (248)
437 3two_A Mannitol dehydrogenase; 21.8 90 0.0031 29.7 4.9 40 117-157 178-218 (348)
438 3jyn_A Quinone oxidoreductase; 21.7 1.3E+02 0.0043 28.3 5.8 77 76-157 98-183 (325)
439 1vj0_A Alcohol dehydrogenase, 21.7 1.4E+02 0.0047 28.9 6.2 39 117-156 197-237 (380)
440 2eih_A Alcohol dehydrogenase; 21.5 1.4E+02 0.0048 28.2 6.2 41 116-157 167-209 (343)
441 4dmm_A 3-oxoacyl-[acyl-carrier 21.4 2.9E+02 0.01 25.0 8.2 57 117-177 29-88 (269)
442 1cdo_A Alcohol dehydrogenase; 21.3 1.1E+02 0.0037 29.5 5.3 39 117-156 194-234 (374)
443 2c07_A 3-oxoacyl-(acyl-carrier 21.3 3.4E+02 0.012 24.6 8.6 57 117-177 45-103 (285)
444 2bd0_A Sepiapterin reductase; 21.2 2E+02 0.007 25.1 6.9 56 118-177 4-68 (244)
445 3edm_A Short chain dehydrogena 21.1 2.6E+02 0.0089 25.1 7.7 57 117-177 9-68 (259)
446 4fs3_A Enoyl-[acyl-carrier-pro 21.0 1.9E+02 0.0066 26.2 6.8 59 117-177 7-68 (256)
447 1mxh_A Pteridine reductase 2; 20.9 1.9E+02 0.0066 26.0 6.8 58 117-177 12-72 (276)
448 1zk4_A R-specific alcohol dehy 20.9 1.8E+02 0.0062 25.6 6.4 56 117-177 7-64 (251)
449 3gvc_A Oxidoreductase, probabl 20.7 2.5E+02 0.0085 25.7 7.5 54 117-177 30-85 (277)
450 3a28_C L-2.3-butanediol dehydr 20.5 2.7E+02 0.0093 24.8 7.6 56 118-177 4-63 (258)
451 2d8a_A PH0655, probable L-thre 20.3 1.5E+02 0.0051 28.1 6.1 40 117-157 169-210 (348)
452 1piw_A Hypothetical zinc-type 20.3 92 0.0032 29.8 4.6 41 116-157 180-221 (360)
453 1v3u_A Leukotriene B4 12- hydr 20.2 1.8E+02 0.006 27.3 6.5 39 116-155 146-186 (333)
454 3rwb_A TPLDH, pyridoxal 4-dehy 20.2 2.6E+02 0.0089 24.9 7.4 54 117-177 7-62 (247)
455 3n74_A 3-ketoacyl-(acyl-carrie 20.2 3.7E+02 0.013 23.8 8.5 54 117-177 10-65 (261)
456 1p0f_A NADP-dependent alcohol 20.1 1.1E+02 0.0039 29.3 5.2 40 117-157 193-234 (373)
457 4hp8_A 2-deoxy-D-gluconate 3-d 20.0 2.9E+02 0.01 25.6 7.9 55 117-177 10-66 (247)
No 1
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=100.00 E-value=5.3e-38 Score=297.37 Aligned_cols=242 Identities=45% Similarity=0.816 Sum_probs=195.0
Q ss_pred CCCccccCCCHHHHHHHHHHHhhhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchh
Q 014664 48 DGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGAN 127 (420)
Q Consensus 48 ~g~~~IDf~d~~a~r~Lt~aLL~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG 127 (420)
+|+.+|||+++++++.|+++++++|||++|.+++++|+|++|+|.+|.+|+.+++... +.. .....+|||||||+|
T Consensus 2 ~~~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~--~~~--~~~~~~vLDlG~G~G 77 (254)
T 2h00_A 2 SGRVSLNFKDPEAVRALTCTLLREDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQ--DSD--KSTLRRGIDIGTGAS 77 (254)
T ss_dssp ---CCSCTTSHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCC--CGG--GCCCCEEEEESCTTT
T ss_pred CcceEeecCChHHHHHHHHHHHHHcCCeeeecCccccCCCccchHHHHHHHHHHHhhc--ccc--CCCCCEEEEeCCChh
Confidence 4788999999999999999999999999999999999999999999999999998642 110 013468999999999
Q ss_pred HHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCC
Q 014664 128 CIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEE 207 (420)
Q Consensus 128 ~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (420)
+++..++.+.++++++|+|+|+.+++.|++|++.++ +.++|+++.+|..+
T Consensus 78 ~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~----------------------------- 127 (254)
T 2h00_A 78 CIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKT----------------------------- 127 (254)
T ss_dssp THHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTC-----------------------------
T ss_pred HHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhh-----------------------------
Confidence 999889888888999999999999999999999985 88889999887421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccccCC-CCcEEEEEECCCcccCccc-c--------cCCCCcccCCCCCcccccC
Q 014664 208 AEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GEQFDFCICNPPFFESMEE-A--------GLNPKTSCGGTPEEMVCSG 277 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~-~~~FD~imcNPPF~~s~ee-a--------~~eP~~a~~G~~~Em~~~G 277 (420)
.++..+... +++||+|+|||||+...++ . ..+|..++.+...+++.+|
T Consensus 128 ----------------------~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkpg 185 (254)
T 2h00_A 128 ----------------------LLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEG 185 (254)
T ss_dssp ----------------------SSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHH
T ss_pred ----------------------hhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecC
Confidence 001111101 2579999999999976521 1 1357777888888999999
Q ss_pred chHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEEEEeec
Q 014664 278 GERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFV 345 (420)
Q Consensus 278 Gel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~lAWsF~ 345 (420)
|++.|+.++++++..++.+.+|++.+++....+..+.+.|++.|++.+++.++.+|++.||++||+|.
T Consensus 186 G~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g~~~~~~~~w~~~ 253 (254)
T 2h00_A 186 GELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFY 253 (254)
T ss_dssp THHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEEEETTEEEEEEEEESC
T ss_pred CEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEEecCCceEEEEEeecc
Confidence 99999999999998889999999999998888899999999999999999999999999999999996
No 2
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.94 E-value=1.4e-26 Score=214.91 Aligned_cols=216 Identities=18% Similarity=0.262 Sum_probs=158.3
Q ss_pred ccccCCCHHHHHHHHHHHhhhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCc-hhHH
Q 014664 51 PRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTG-ANCI 129 (420)
Q Consensus 51 ~~IDf~d~~a~r~Lt~aLL~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTG-sG~I 129 (420)
.++||++++++++++++++++|||..+.+.+++++|++.. .++ ++..++ ....+|||+||| +|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~l-~~~~~~-----------~~~~~vLDlG~G~~G~~ 70 (230)
T 3evz_A 5 GKLDFSNRQARILYNKAIAKALFGLDIEYHPKGLVTTPIS--RYI-FLKTFL-----------RGGEVALEIGTGHTAMM 70 (230)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHCCCCCCCTTSCCCCHHH--HHH-HHHTTC-----------CSSCEEEEECCTTTCHH
T ss_pred ceeeecCHHHHHHHHHHHHHHhcCCceecCCCeEeCCCch--hhh-HhHhhc-----------CCCCEEEEcCCCHHHHH
Confidence 4689999999999999999999999999999999998321 121 111111 124689999999 9999
Q ss_pred HHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCC
Q 014664 130 YPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAE 209 (420)
Q Consensus 130 ~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (420)
+..++... +.+++|+|+|+.+++.|++|++.++ + +++++.+|...
T Consensus 71 ~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~------------------------------- 115 (230)
T 3evz_A 71 ALMAEKFF-NCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGI------------------------------- 115 (230)
T ss_dssp HHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCS-------------------------------
T ss_pred HHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchh-------------------------------
Confidence 88777665 8899999999999999999999985 5 78998887421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHH
Q 014664 210 PSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIED 289 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~e 289 (420)
+..+ .+++||+|+|||||+...+....+|..++.++.+ +..++.+++++
T Consensus 116 ----------------------~~~~--~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~ 164 (230)
T 3evz_A 116 ----------------------IKGV--VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKY-------GEEFSVKLLEE 164 (230)
T ss_dssp ----------------------STTT--CCSCEEEEEECCCCC---------------CCSS-------SCHHHHHHHHH
T ss_pred ----------------------hhhc--ccCceeEEEECCCCcCCccccccChhhhhccCcc-------chHHHHHHHHH
Confidence 1111 1368999999999998776555677777777776 66788999999
Q ss_pred HHHhhcCCeEEEEEeCC-cCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEEEEeecCc
Q 014664 290 SVALKQTFRWYTSMVGR-KSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWSFVPP 347 (420)
Q Consensus 290 S~~l~~~~~w~tsmvgk-~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~lAWsF~~~ 347 (420)
+..+++++|++...+.. ..+...+.+.+++.|+ .++.+++.+|...+|+++|+-..+
T Consensus 165 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~g~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 165 AFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGY-SVKDIKFKVGTRWRHSLIFFKGIS 222 (230)
T ss_dssp HGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTC-EEEEEEECCCC-CEEEEEEECCC-
T ss_pred HHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCC-ceEEEEecCCCeEEEEEEEecccc
Confidence 99999999998776643 4678999999999999 578889999999999999876544
No 3
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.93 E-value=4.9e-25 Score=211.93 Aligned_cols=193 Identities=20% Similarity=0.225 Sum_probs=163.0
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
+|||+++.+.+++|+|+ |.++..+.++.+.+. . ...+|||||||+|+++..++...++++++|+|+|+.
T Consensus 76 ~f~~~~~~~~~~~~ipr-~~te~l~~~~l~~~~-~---------~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~ 144 (276)
T 2b3t_A 76 EFWSLPLFVSPATLIPR-PDTECLVEQALARLP-E---------QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPD 144 (276)
T ss_dssp EETTEEEECCTTSCCCC-TTHHHHHHHHHHHSC-S---------SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHH
T ss_pred EECCceEEeCCCCcccC-chHHHHHHHHHHhcc-c---------CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHH
Confidence 69999999999999999 778888888777653 1 235899999999999999988888899999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
+++.|++|++.++ +. +++++.+|...
T Consensus 145 ~l~~a~~n~~~~~-~~-~v~~~~~d~~~---------------------------------------------------- 170 (276)
T 2b3t_A 145 AVSLAQRNAQHLA-IK-NIHILQSDWFS---------------------------------------------------- 170 (276)
T ss_dssp HHHHHHHHHHHHT-CC-SEEEECCSTTG----------------------------------------------------
T ss_pred HHHHHHHHHHHcC-CC-ceEEEEcchhh----------------------------------------------------
Confidence 9999999999884 64 68888776421
Q ss_pred ccccccCCCCcEEEEEECCCcccCcc------cccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEe
Q 014664 231 VLVGVVRDGEQFDFCICNPPFFESME------EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (420)
Q Consensus 231 il~~i~~~~~~FD~imcNPPF~~s~e------ea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmv 304 (420)
.+ ..++||+|+|||||+...+ ...++|..++.|+.+ ++.++.++++++..+++++|++..++
T Consensus 171 ---~~--~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~-------g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 171 ---AL--AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADS-------GMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp ---GG--TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHH-------HTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ---hc--ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCc-------HHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 11 1357999999999997654 123689999888776 78999999999999999999998888
Q ss_pred CCcCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEEEE
Q 014664 305 GRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAW 342 (420)
Q Consensus 305 gk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~lAW 342 (420)
+ ..+.+.+.+.|++.|+..+.+.+|..|+ .|+++|.
T Consensus 239 ~-~~~~~~~~~~l~~~Gf~~v~~~~d~~g~-~r~~~~~ 274 (276)
T 2b3t_A 239 G-WQQGEAVRQAFILAGYHDVETCRDYGDN-ERVTLGR 274 (276)
T ss_dssp C-SSCHHHHHHHHHHTTCTTCCEEECTTSS-EEEEEEE
T ss_pred C-chHHHHHHHHHHHCCCcEEEEEecCCCC-CcEEEEE
Confidence 8 7889999999999999999999999998 6888775
No 4
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.92 E-value=4.7e-25 Score=215.10 Aligned_cols=186 Identities=19% Similarity=0.269 Sum_probs=153.1
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
+|||+.|.+.+++|+|| |.++.++.|+.+.+... ...+|||||||+|++++.|+.. ++++|+|+|+|++
T Consensus 89 ~f~~~~~~v~~~~lipr-~~te~lv~~~l~~~~~~---------~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~ 157 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFVPR-PETEELVELALELIRKY---------GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSK 157 (284)
T ss_dssp EETTEEEECCTTSCCCC-TTHHHHHHHHHHHHHHH---------TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHH
T ss_pred EECCeEEEeCCCceecC-hhHHHHHHHHHHHhccc---------CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHH
Confidence 59999999999999999 88999999988877521 2358999999999999999988 8999999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPP 230 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
|++.|++|++.++ +.++++++.+|...
T Consensus 158 al~~A~~n~~~~~-l~~~v~~~~~D~~~---------------------------------------------------- 184 (284)
T 1nv8_A 158 AVEIARKNAERHG-VSDRFFVRKGEFLE---------------------------------------------------- 184 (284)
T ss_dssp HHHHHHHHHHHTT-CTTSEEEEESSTTG----------------------------------------------------
T ss_pred HHHHHHHHHHHcC-CCCceEEEECcchh----------------------------------------------------
Confidence 9999999999995 88789999887431
Q ss_pred ccccccCCCCcE---EEEEECCCcccCcc----cccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEE
Q 014664 231 VLVGVVRDGEQF---DFCICNPPFFESME----EAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM 303 (420)
Q Consensus 231 il~~i~~~~~~F---D~imcNPPF~~s~e----ea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsm 303 (420)
.+ .++| |+|+|||||+...+ +..++|..++.|+.+ ++.|+++++. ..++++||+.++
T Consensus 185 ---~~---~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~d-------gl~~~~~i~~---~~l~pgG~l~~e 248 (284)
T 1nv8_A 185 ---PF---KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGED-------GLDFYREFFG---RYDTSGKIVLME 248 (284)
T ss_dssp ---GG---GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTT-------SCHHHHHHHH---HCCCTTCEEEEE
T ss_pred ---hc---ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCc-------HHHHHHHHHH---hcCCCCCEEEEE
Confidence 11 1357 99999999998654 112678888888877 7788888761 345589999999
Q ss_pred eCCcCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEEEEe
Q 014664 304 VGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLAWS 343 (420)
Q Consensus 304 vgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~lAWs 343 (420)
+| ..+.+.+.+.+++. .+.+|+.|+ .|+++++.
T Consensus 249 ~~-~~q~~~v~~~~~~~-----~~~~D~~g~-~R~~~~~~ 281 (284)
T 1nv8_A 249 IG-EDQVEELKKIVSDT-----VFLKDSAGK-YRFLLLNR 281 (284)
T ss_dssp CC-TTCHHHHTTTSTTC-----EEEECTTSS-EEEEEEEC
T ss_pred EC-chHHHHHHHHHHhC-----CeecccCCC-ceEEEEEE
Confidence 99 78899998888775 788999999 68877753
No 5
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.88 E-value=3.2e-23 Score=187.83 Aligned_cols=196 Identities=18% Similarity=0.194 Sum_probs=129.2
Q ss_pred EEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHH
Q 014664 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 77 ~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~ 156 (420)
|.+++++++|+ |.+...+.|+.+.+... ....+|||+|||+|.++..++...++++++|+|+|+.+++.|+
T Consensus 1 f~~~~~~~~p~-~~~~~~~~~~~~~l~~~--------~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~ 71 (215)
T 4dzr_A 1 FEVGPDCLIPR-PDTEVLVEEAIRFLKRM--------PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVAR 71 (215)
T ss_dssp CBCSGGGGSCC-HHHHHHHHHHHHHHTTC--------CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------
T ss_pred CcCCCCccCCC-ccHHHHHHHHHHHhhhc--------CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 46789999999 77888888888877531 1346899999999999988888877889999999999999999
Q ss_pred HHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 014664 157 KNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV 236 (420)
Q Consensus 157 ~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~ 236 (420)
+|+..++ + +++++.+|..+ .+....
T Consensus 72 ~~~~~~~-~--~~~~~~~d~~~----------------------------------------------------~~~~~~ 96 (215)
T 4dzr_A 72 RNAERFG-A--VVDWAAADGIE----------------------------------------------------WLIERA 96 (215)
T ss_dssp --------------CCHHHHHH----------------------------------------------------HHHHHH
T ss_pred HHHHHhC-C--ceEEEEcchHh----------------------------------------------------hhhhhh
Confidence 9998874 4 57766665310 011000
Q ss_pred CCCCcEEEEEECCCcccCcccc-------cCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeE-EEEEeCCcC
Q 014664 237 RDGEQFDFCICNPPFFESMEEA-------GLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRW-YTSMVGRKS 308 (420)
Q Consensus 237 ~~~~~FD~imcNPPF~~s~eea-------~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w-~tsmvgk~~ 308 (420)
...++||+|+|||||+...... .++|..++.++.. ++.++.++++++..+++++|+ +.+.++ ..
T Consensus 97 ~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~ 168 (215)
T 4dzr_A 97 ERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGED-------GLQFYRRMAALPPYVLARGRAGVFLEVG-HN 168 (215)
T ss_dssp HTTCCBSEEEECCCCCC------------------------C-------TTHHHHHHHTCCGGGBCSSSEEEEEECT-TS
T ss_pred hccCcccEEEECCCCCCCccccccChhhhccCccccccCCCc-------HHHHHHHHHHHHHHHhcCCCeEEEEEEC-Cc
Confidence 0136899999999998765422 2467777777766 788999999999999999999 767776 78
Q ss_pred cHHHHHHHHH--HcCCceEEEEEecCCCeeeEEEEEeec
Q 014664 309 NLKFLISKLR--KVGVTIVKTTEFVQGQTCRWGLAWSFV 345 (420)
Q Consensus 309 ~l~~l~~~L~--~~g~~~v~~~e~~qG~t~Rw~lAWsF~ 345 (420)
+...+.+.++ +.|+..+.+.++..|+ .|++++|...
T Consensus 169 ~~~~~~~~l~~~~~gf~~~~~~~~~~~~-~r~~~~~~~~ 206 (215)
T 4dzr_A 169 QADEVARLFAPWRERGFRVRKVKDLRGI-DRVIAVTREP 206 (215)
T ss_dssp CHHHHHHHTGGGGGGTEECCEEECTTSC-EEEEEEEECC
T ss_pred cHHHHHHHHHHhhcCCceEEEEEecCCC-EEEEEEEEcC
Confidence 8999999999 9999999999999998 7999988643
No 6
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=2.3e-16 Score=150.05 Aligned_cols=169 Identities=18% Similarity=0.148 Sum_probs=111.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++.+.+ .+++|+|+|+.+++.|++|++.|+ +.++|+++.+|...
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~----------------- 110 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKK----------------- 110 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGG-----------------
T ss_pred CCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHH-----------------
Confidence 45899999999999888776643 499999999999999999999995 88899999887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+...+ ..++||+|+|||||+........+|.....-+.+|
T Consensus 111 -----------------------------------~~~~~--~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~--- 150 (259)
T 3lpm_A 111 -----------------------------------ITDLI--PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHE--- 150 (259)
T ss_dssp -----------------------------------GGGTS--CTTCEEEEEECCCC------------------------
T ss_pred -----------------------------------hhhhh--ccCCccEEEECCCCCCCccccCCCCchHHHhhhcc---
Confidence 01001 24689999999999986332222222221112221
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEE--EecCCCe-eeEEEEEeecCc
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT--EFVQGQT-CRWGLAWSFVPP 347 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~--e~~qG~t-~Rw~lAWsF~~~ 347 (420)
...-+..+++.+..+++++|++...+. ..++..+...+++.|+...++. .-..|+. .|.++.+.....
T Consensus 151 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~~~ 221 (259)
T 3lpm_A 151 ---VMCTLEDTIRVAASLLKQGGKANFVHR-PERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGK 221 (259)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEC-TTTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEETCC
T ss_pred ---ccCCHHHHHHHHHHHccCCcEEEEEEc-HHHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeCCC
Confidence 123466888899999999999876554 8899999999999998644332 2233444 456665655433
No 7
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=2.9e-16 Score=150.32 Aligned_cols=172 Identities=16% Similarity=0.151 Sum_probs=113.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH---CCCCCCcEEEEEccCCCCCCcccccccCCcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS---NPHISELIEIRKVDNSESTPSIQESLTGKSV 192 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~---N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~ 192 (420)
..+|||||||+|++++.|+.+.++.+++|+|+|+.+++.|++|++. |+ +.++|+++.+|.....+
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~----------- 104 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAK----------- 104 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHH-----------
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhh-----------
Confidence 4589999999999999999888888999999999999999999998 85 88889999988542000
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc-ccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCC
Q 014664 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVL-VGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPE 271 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il-~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~ 271 (420)
... ..+ ..++||+|+|||||+..... ..|.....-+.+
T Consensus 105 -------------------------------------~~~~~~~--~~~~fD~Vv~nPPy~~~~~~--~~~~~~~~~a~~ 143 (260)
T 2ozv_A 105 -------------------------------------ARVEAGL--PDEHFHHVIMNPPYNDAGDR--RTPDALKAEAHA 143 (260)
T ss_dssp -------------------------------------HHHHTTC--CTTCEEEEEECCCC--------------------
T ss_pred -------------------------------------hhhhhcc--CCCCcCEEEECCCCcCCCCC--CCcCHHHHHHhh
Confidence 000 001 24689999999999986421 112111111111
Q ss_pred cccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecC--CCe-eeEEEEEeecCcc
Q 014664 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ--GQT-CRWGLAWSFVPPA 348 (420)
Q Consensus 272 Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~q--G~t-~Rw~lAWsF~~~~ 348 (420)
+ ....+..+++.+..+++++|++.+.+. ..++..+.+.+++. +..+++..... ++. .|.++.+......
T Consensus 144 ~------~~~~~~~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~~~~ 215 (260)
T 2ozv_A 144 M------TEGLFEDWIRTASAIMVSGGQLSLISR-PQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKGSRA 215 (260)
T ss_dssp ---------CCHHHHHHHHHHHEEEEEEEEEEEC-GGGHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEEETCCC
T ss_pred c------CcCCHHHHHHHHHHHcCCCCEEEEEEc-HHHHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEEeCCCC
Confidence 1 111256788888999999999977666 77899999999875 66555555432 333 4566666665433
No 8
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.64 E-value=3.3e-15 Score=133.74 Aligned_cols=155 Identities=18% Similarity=0.157 Sum_probs=110.5
Q ss_pred CceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH
Q 014664 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (420)
Q Consensus 82 g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~ 161 (420)
.+++|+ |.+...+.++... . ....+|||+|||+|.++..|+.+. +++|+|+|+.+++. .
T Consensus 2 ~v~~P~-~~~~~l~~~l~~~-~----------~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------~ 60 (170)
T 3q87_B 2 DWYEPG-EDTYTLMDALERE-G----------LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------H 60 (170)
T ss_dssp CSCCCC-HHHHHHHHHHHHH-T----------CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------C
T ss_pred cccCcC-ccHHHHHHHHHhh-c----------CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------c
Confidence 478898 6555555553321 1 123489999999999987776553 99999999999987 1
Q ss_pred CCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCc
Q 014664 162 NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQ 241 (420)
Q Consensus 162 N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~ 241 (420)
.+++++.+|... .+ .+++
T Consensus 61 -----~~~~~~~~d~~~-------------------------------------------------------~~--~~~~ 78 (170)
T 3q87_B 61 -----RGGNLVRADLLC-------------------------------------------------------SI--NQES 78 (170)
T ss_dssp -----SSSCEEECSTTT-------------------------------------------------------TB--CGGG
T ss_pred -----cCCeEEECChhh-------------------------------------------------------hc--ccCC
Confidence 246777776421 00 1368
Q ss_pred EEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcC
Q 014664 242 FDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 242 FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g 321 (420)
||+|+|||||+...+... +.++.+ ...++.++++.. ++|++........+.+.+.+.|++.|
T Consensus 79 fD~i~~n~~~~~~~~~~~------~~~~~~-------~~~~~~~~~~~l-----pgG~l~~~~~~~~~~~~l~~~l~~~g 140 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI------IGGGYL-------GREVIDRFVDAV-----TVGMLYLLVIEANRPKEVLARLEERG 140 (170)
T ss_dssp CSEEEECCCCBTTCCCTT------TBCCGG-------GCHHHHHHHHHC-----CSSEEEEEEEGGGCHHHHHHHHHHTT
T ss_pred CCEEEECCCCccCCcccc------ccCCcc-------hHHHHHHHHhhC-----CCCEEEEEEecCCCHHHHHHHHHHCC
Confidence 999999999997644321 333333 567788777655 77777666555789999999999999
Q ss_pred CceEEEEEecCCCeeeE
Q 014664 322 VTIVKTTEFVQGQTCRW 338 (420)
Q Consensus 322 ~~~v~~~e~~qG~t~Rw 338 (420)
+..+.+.+...|. .|.
T Consensus 141 f~~~~~~~~~~~~-e~~ 156 (170)
T 3q87_B 141 YGTRILKVRKILG-ETV 156 (170)
T ss_dssp CEEEEEEEEECSS-SEE
T ss_pred CcEEEEEeeccCC-ceE
Confidence 9999999988887 343
No 9
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.58 E-value=3.4e-14 Score=136.10 Aligned_cols=171 Identities=14% Similarity=0.101 Sum_probs=128.6
Q ss_pred HhhhcCCcEEEecCC--ceeCCCCCcHhHHHHHHH------------HHccCCCCCCCCCCCCCeEEEECCchhHHHHHH
Q 014664 68 LLLHDHGLNWWIPDG--QLCPTVPNRSNYIHWIED------------LLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLL 133 (420)
Q Consensus 68 LL~~ffgl~~~vp~g--~LiPrvP~R~nyi~wi~d------------ll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~L 133 (420)
++-.+||..+.++.+ +|+|+ |.+.+|+..+.. ++.... -....+|||+|||+|+++..+
T Consensus 58 i~g~~~g~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~VLDiG~G~G~~~~~l 130 (277)
T 1o54_A 58 VFEKGPGEIIRTSAGKKGYILI-PSLIDEIMNMKRRTQIVYPKDSSFIAMMLD------VKEGDRIIDTGVGSGAMCAVL 130 (277)
T ss_dssp HTTSCTTCEEECTTCCEEEEEC-CCHHHHHHTCCC-CCCCCHHHHHHHHHHTT------CCTTCEEEEECCTTSHHHHHH
T ss_pred hcCCCCCcEEEEcCCcEEEEeC-CCHHHHHhhccccCCccCHHHHHHHHHHhC------CCCCCEEEEECCcCCHHHHHH
Confidence 455689999999998 89999 777776643211 111100 112458999999999998888
Q ss_pred HHh-hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCC
Q 014664 134 GAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSS 212 (420)
Q Consensus 134 a~~-~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (420)
+.. .+..+++++|+++.+++.|++|++.++ +.++++++..|..+
T Consensus 131 a~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------------------------- 175 (277)
T 1o54_A 131 ARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISE---------------------------------- 175 (277)
T ss_dssp HHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGG----------------------------------
T ss_pred HHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHH----------------------------------
Confidence 877 457899999999999999999999884 76788888765321
Q ss_pred CCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHH
Q 014664 213 SSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVA 292 (420)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~ 292 (420)
.+ +.+.||+|+||||.. ..++++...
T Consensus 176 ---------------------~~--~~~~~D~V~~~~~~~-------------------------------~~~l~~~~~ 201 (277)
T 1o54_A 176 ---------------------GF--DEKDVDALFLDVPDP-------------------------------WNYIDKCWE 201 (277)
T ss_dssp ---------------------CC--SCCSEEEEEECCSCG-------------------------------GGTHHHHHH
T ss_pred ---------------------cc--cCCccCEEEECCcCH-------------------------------HHHHHHHHH
Confidence 11 135799999999732 134555667
Q ss_pred hhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCC
Q 014664 293 LKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ 334 (420)
Q Consensus 293 l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~ 334 (420)
+++++|++........++..+.+.|++.|+..+++.++..+.
T Consensus 202 ~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~ 243 (277)
T 1o54_A 202 ALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLFRP 243 (277)
T ss_dssp HEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCCCC
T ss_pred HcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEeeee
Confidence 888999998888866789999999999999988888876544
No 10
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.53 E-value=1.7e-14 Score=128.29 Aligned_cols=95 Identities=17% Similarity=0.071 Sum_probs=78.1
Q ss_pred hhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 70 ~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
.+++|+.+.+|++. .|+ |....++.++.+.+... ....+|||+|||+|.++..++. .+..+++|+|+|+
T Consensus 9 g~~~~~~~~~~~~~-~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~ 77 (187)
T 2fhp_A 9 GEYGGRRLKALDGD-NTR-PTTDKVKESIFNMIGPY--------FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNF 77 (187)
T ss_dssp STTTTCBCCCCCCC-SSC-CCCHHHHHHHHHHHCSC--------CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCH
T ss_pred ccccCccccCCCCC-CcC-cCHHHHHHHHHHHHHhh--------cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCH
Confidence 46889999999887 788 77888888888887531 1245899999999998776655 4557999999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 150 ~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+++.|++|++.++ +.++++++.+|.
T Consensus 78 ~~~~~a~~~~~~~~-~~~~~~~~~~d~ 103 (187)
T 2fhp_A 78 AALKVIKENIAITK-EPEKFEVRKMDA 103 (187)
T ss_dssp HHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred HHHHHHHHHHHHhC-CCcceEEEECcH
Confidence 99999999999985 777899998873
No 11
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.52 E-value=5e-13 Score=134.69 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=102.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..++||+|||+|.+.+.++...+..+++|+|+|+.+++.|++|++.++ +.++|+++.+|...
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~i~~~~~D~~~----------------- 279 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDKIKFIQGDATQ----------------- 279 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGGCEEEECCGGG-----------------
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhh-----------------
Confidence 357999999999998777765443489999999999999999999995 87889999887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ....+.||+|+|||||...... ..+
T Consensus 280 -----------------------------------~----~~~~~~fD~Ii~npPyg~r~~~------------~~~--- 305 (373)
T 3tm4_A 280 -----------------------------------L----SQYVDSVDFAISNLPYGLKIGK------------KSM--- 305 (373)
T ss_dssp -----------------------------------G----GGTCSCEEEEEEECCCC------------------CC---
T ss_pred -----------------------------------C----CcccCCcCEEEECCCCCcccCc------------chh---
Confidence 0 0123679999999999753221 110
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT 335 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t 335 (420)
-..++..++++...++ ++|...... +...+.+.+.+.|+...+......|.-
T Consensus 306 ---~~~ly~~~~~~l~r~l--~g~~~~i~~---~~~~~~~~~~~~G~~~~~~~~~~nG~l 357 (373)
T 3tm4_A 306 ---IPDLYMKFFNELAKVL--EKRGVFITT---EKKAIEEAIAENGFEIIHHRVIGHGGL 357 (373)
T ss_dssp ---HHHHHHHHHHHHHHHE--EEEEEEEES---CHHHHHHHHHHTTEEEEEEEEEEETTE
T ss_pred ---HHHHHHHHHHHHHHHc--CCeEEEEEC---CHHHHHHHHHHcCCEEEEEEEEEcCCE
Confidence 2345788888888766 455444443 556677788899999888888888874
No 12
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.51 E-value=2.1e-13 Score=125.42 Aligned_cols=166 Identities=12% Similarity=0.137 Sum_probs=116.1
Q ss_pred cCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHH
Q 014664 80 PDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 80 p~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~ 159 (420)
.+.+++|+ |+. ....|. +++.. ...+|||||||+|++...++...++++++|+|+++.+++.|++|+
T Consensus 19 ~~~~~~~~-p~~-~~~~~~-~~f~~----------~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~ 85 (214)
T 1yzh_A 19 NPQYVVLN-PLE-AKAKWR-DLFGN----------DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV 85 (214)
T ss_dssp CTTTEECC-GGG-TTTTHH-HHHTS----------CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEecC-hhh-cccCHH-HHcCC----------CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH
Confidence 35688887 432 223454 33321 245899999999999999998888999999999999999999999
Q ss_pred HHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCC
Q 014664 160 KSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDG 239 (420)
Q Consensus 160 ~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~ 239 (420)
+.++ + .+|.++.+|... +.... ..
T Consensus 86 ~~~~-~-~~v~~~~~d~~~-----------------------------------------------------~~~~~-~~ 109 (214)
T 1yzh_A 86 LEVG-V-PNIKLLWVDGSD-----------------------------------------------------LTDYF-ED 109 (214)
T ss_dssp HHHC-C-SSEEEEECCSSC-----------------------------------------------------GGGTS-CT
T ss_pred HHcC-C-CCEEEEeCCHHH-----------------------------------------------------HHhhc-CC
Confidence 9885 6 579999887431 00001 23
Q ss_pred CcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHH
Q 014664 240 EQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319 (420)
Q Consensus 240 ~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~ 319 (420)
+.||+|+||+|--.. ...+++.. .....++++...+++++|++............+.+.+.+
T Consensus 110 ~~~D~i~~~~~~~~~--~~~~~~~~----------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 171 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWP--KKRHEKRR----------------LTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQ 171 (214)
T ss_dssp TCCSEEEEESCCCCC--SGGGGGGS----------------TTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcc--ccchhhhc----------------cCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 579999999873210 01111111 014567777788889999987777645667888899999
Q ss_pred cCCceEEEEEecC
Q 014664 320 VGVTIVKTTEFVQ 332 (420)
Q Consensus 320 ~g~~~v~~~e~~q 332 (420)
.|+..+.+..|+.
T Consensus 172 ~g~~~~~~~~d~~ 184 (214)
T 1yzh_A 172 YGMKLNGVWLDLH 184 (214)
T ss_dssp HTCEEEEEESSGG
T ss_pred CCCeeeecccccc
Confidence 9998777666553
No 13
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.51 E-value=2.5e-13 Score=122.43 Aligned_cols=94 Identities=9% Similarity=0.012 Sum_probs=71.3
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+.|..+.+|+ ..+| |.......++.+.+.... .....+|||+|||+|.++..++. ....+|+|+|+|+.
T Consensus 9 ~~~g~~l~~~~--~~~r-p~~~~~~~~l~~~l~~~~------~~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~ 78 (189)
T 3p9n_A 9 VAGGRRIAVPP--RGTR-PTTDRVRESLFNIVTARR------DLTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQR 78 (189)
T ss_dssp TTTTCEEECCS--CCC----CHHHHHHHHHHHHHHS------CCTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHH
T ss_pred ccCCcEecCCC--CCCc-cCcHHHHHHHHHHHHhcc------CCCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHH
Confidence 46788999998 5666 667777777777775311 01245899999999998775554 35568999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+++.|++|++.++ + ++++++.+|.
T Consensus 79 ~~~~a~~~~~~~~-~-~~v~~~~~d~ 102 (189)
T 3p9n_A 79 SAAVIARNIEALG-L-SGATLRRGAV 102 (189)
T ss_dssp HHHHHHHHHHHHT-C-SCEEEEESCH
T ss_pred HHHHHHHHHHHcC-C-CceEEEEccH
Confidence 9999999999985 6 6799998874
No 14
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.50 E-value=3e-13 Score=134.58 Aligned_cols=163 Identities=17% Similarity=0.116 Sum_probs=113.2
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCC
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISE 167 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~ 167 (420)
|-+......+..++.. ....++||+|||+|.+.+.++... ++.+++|+|+|+.+++.|++|++.++ +.
T Consensus 186 ~l~~~la~~l~~~~~~---------~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~- 254 (354)
T 3tma_A 186 SLTPVLAQALLRLADA---------RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS- 254 (354)
T ss_dssp SCCHHHHHHHHHHTTC---------CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-
T ss_pred CcCHHHHHHHHHHhCC---------CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-
Confidence 4455555555544432 123589999999999988887766 67899999999999999999999985 76
Q ss_pred cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEE
Q 014664 168 LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCIC 247 (420)
Q Consensus 168 rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imc 247 (420)
+|+++..|..+ + ....+.||+|+|
T Consensus 255 ~i~~~~~D~~~----------------------------------------------------~----~~~~~~~D~Ii~ 278 (354)
T 3tma_A 255 WIRFLRADARH----------------------------------------------------L----PRFFPEVDRILA 278 (354)
T ss_dssp TCEEEECCGGG----------------------------------------------------G----GGTCCCCSEEEE
T ss_pred ceEEEeCChhh----------------------------------------------------C----ccccCCCCEEEE
Confidence 89999887431 0 011245899999
Q ss_pred CCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEE
Q 014664 248 NPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKT 327 (420)
Q Consensus 248 NPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~ 327 (420)
||||.....+ .. .-..++..++++..++++++|.+....+. ...+...++ .|+...+.
T Consensus 279 npPyg~r~~~------------~~------~~~~~~~~~~~~~~~~LkpgG~l~i~t~~---~~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 279 NPPHGLRLGR------------KE------GLFHLYWDFLRGALALLPPGGRVALLTLR---PALLKRALP-PGFALRHA 336 (354)
T ss_dssp CCCSCC----------------CH------HHHHHHHHHHHHHHHTSCTTCEEEEEESC---HHHHHHHCC-TTEEEEEE
T ss_pred CCCCcCccCC------------cc------cHHHHHHHHHHHHHHhcCCCcEEEEEeCC---HHHHHHHhh-cCcEEEEE
Confidence 9999643211 01 13557889999999988888777666553 233344444 78877777
Q ss_pred EEecCCCeeeEEE
Q 014664 328 TEFVQGQTCRWGL 340 (420)
Q Consensus 328 ~e~~qG~t~Rw~l 340 (420)
.....|...+.++
T Consensus 337 ~~l~~g~l~~~i~ 349 (354)
T 3tma_A 337 RVVEQGGVYPRVF 349 (354)
T ss_dssp EECCBTTBCCEEE
T ss_pred EEEEeCCEEEEEE
Confidence 7777887655433
No 15
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.50 E-value=1e-12 Score=116.44 Aligned_cols=161 Identities=20% Similarity=0.210 Sum_probs=115.5
Q ss_pred EEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHH
Q 014664 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (420)
Q Consensus 76 ~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A 155 (420)
.+..+.+.+.|+-. .....++.+.+.. ....+|||+|||+|.+...++.. +.+++|+|+++.+++.|
T Consensus 24 ~~~~~~~~~~~~~~--~~~~~~l~~~~~~---------~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 24 KFKTDSGVFSYGKV--DKGTKILVENVVV---------DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLA 90 (194)
T ss_dssp EEEEETTSTTTTSC--CHHHHHHHHHCCC---------CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHH
T ss_pred EEEeCCCcCCcccc--chHHHHHHHHccc---------CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHH
Confidence 34667788877632 1233444455432 13458999999999987777655 78999999999999999
Q ss_pred HHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccc
Q 014664 156 EKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVG 234 (420)
Q Consensus 156 ~~N~~~N~~l~~-rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 234 (420)
++|+..++ +.+ +++++..|..+ .+
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~d~~~----------------------------------------------------~~-- 115 (194)
T 1dus_A 91 KENIKLNN-LDNYDIRVVHSDLYE----------------------------------------------------NV-- 115 (194)
T ss_dssp HHHHHHTT-CTTSCEEEEECSTTT----------------------------------------------------TC--
T ss_pred HHHHHHcC-CCccceEEEECchhc----------------------------------------------------cc--
Confidence 99999885 654 59998886431 00
Q ss_pred ccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHH
Q 014664 235 VVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLI 314 (420)
Q Consensus 235 i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~ 314 (420)
..+.||+|+|||||+.. ......++++...+++++|++............+.
T Consensus 116 ---~~~~~D~v~~~~~~~~~-------------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~ 167 (194)
T 1dus_A 116 ---KDRKYNKIITNPPIRAG-------------------------KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLA 167 (194)
T ss_dssp ---TTSCEEEEEECCCSTTC-------------------------HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHH
T ss_pred ---ccCCceEEEECCCcccc-------------------------hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHH
Confidence 13579999999999731 22355677788888889998877776566777788
Q ss_pred HHHHHcCCceEEEEEecCC
Q 014664 315 SKLRKVGVTIVKTTEFVQG 333 (420)
Q Consensus 315 ~~L~~~g~~~v~~~e~~qG 333 (420)
+.|++. +..++++....|
T Consensus 168 ~~l~~~-~~~~~~~~~~~~ 185 (194)
T 1dus_A 168 KYMKDV-FGNVETVTIKGG 185 (194)
T ss_dssp HHHHHH-HSCCEEEEEETT
T ss_pred HHHHHH-hcceEEEecCCc
Confidence 888887 556666665443
No 16
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=3.4e-13 Score=128.12 Aligned_cols=123 Identities=20% Similarity=0.214 Sum_probs=97.0
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (420)
.+|+|||||+|+|++.++...+..+|+|+|+|+.|++.|++|++.|+ +.++|+++.+|..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l------------------- 76 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGL------------------- 76 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGG-------------------
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchh-------------------
Confidence 58999999999999988887677899999999999999999999995 8889999988742
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccccc
Q 014664 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~ 276 (420)
.++. ..++||+|+.. + .
T Consensus 77 ------------------------------------~~l~-~~~~~D~Ivia----------G----------------~ 93 (225)
T 3kr9_A 77 ------------------------------------AAFE-ETDQVSVITIA----------G----------------M 93 (225)
T ss_dssp ------------------------------------GGCC-GGGCCCEEEEE----------E----------------E
T ss_pred ------------------------------------hhcc-cCcCCCEEEEc----------C----------------C
Confidence 2221 12258877720 0 1
Q ss_pred CchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEE
Q 014664 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (420)
Q Consensus 277 GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~ 326 (420)
|| ..+.+|++++...+.+++|+. +....+...+.+.|.+.|+..+.
T Consensus 94 Gg--~~i~~Il~~~~~~L~~~~~lV--lq~~~~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 94 GG--RLIARILEEGLGKLANVERLI--LQPNNREDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp CH--HHHHHHHHHTGGGCTTCCEEE--EEESSCHHHHHHHHHHTTEEEEE
T ss_pred Ch--HHHHHHHHHHHHHhCCCCEEE--EECCCCHHHHHHHHHHCCCEEEE
Confidence 22 458899999999888899863 33357899999999999987554
No 17
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.43 E-value=8.5e-13 Score=125.84 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=96.7
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (420)
.+|+|||||+|+|++.|+...+..+|+|+|||+.+++.|++|++.|+ +.++|+++.+|..
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l------------------- 82 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGL------------------- 82 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGG-------------------
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchh-------------------
Confidence 58999999999999888877667799999999999999999999995 9899999998742
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccccc
Q 014664 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~ 276 (420)
.++ .+++.||+|+. +
T Consensus 83 ------------------------------------~~~-~~~~~~D~Ivi----------a------------------ 97 (230)
T 3lec_A 83 ------------------------------------SAF-EEADNIDTITI----------C------------------ 97 (230)
T ss_dssp ------------------------------------GGC-CGGGCCCEEEE----------E------------------
T ss_pred ------------------------------------hcc-ccccccCEEEE----------e------------------
Confidence 111 11236898772 1
Q ss_pred CchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEE
Q 014664 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (420)
Q Consensus 277 GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~ 326 (420)
|-+-..+.+|+++....++.+++| .+..-.....|.+.|.+.|+..+.
T Consensus 98 GmGg~lI~~IL~~~~~~l~~~~~l--Ilqp~~~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 98 GMGGRLIADILNNDIDKLQHVKTL--VLQPNNREDDLRKWLAANDFEIVA 145 (230)
T ss_dssp EECHHHHHHHHHHTGGGGTTCCEE--EEEESSCHHHHHHHHHHTTEEEEE
T ss_pred CCchHHHHHHHHHHHHHhCcCCEE--EEECCCChHHHHHHHHHCCCEEEE
Confidence 112267889999998888888875 333367799999999999986544
No 18
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.43 E-value=1.8e-13 Score=128.92 Aligned_cols=47 Identities=26% Similarity=0.255 Sum_probs=42.3
Q ss_pred CCeEEEECCchhHHHHHHHHh--hcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGAS--LLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~--~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
..+|||+|||+|.++..++.. .++++++|+|+|+.+++.|++|+..+
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 468999999999998888876 56789999999999999999999876
No 19
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=1.9e-12 Score=130.95 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=88.4
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC--cEEEEEccCCCCCCcccccccCCcccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE--LIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~--rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
.+|||+|||+|.++..++...|+.+|+|+|+|+.+++.|++|++.|+ +.+ +++++..|..+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ng-l~~~~~v~~~~~D~~~---------------- 286 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALS---------------- 286 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGGGEEEEECSTTT----------------
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcC-CCcCceEEEEechhhc----------------
Confidence 68999999999999999888889999999999999999999999985 654 47777776421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
.+ ..++||+|+|||||+...... ..
T Consensus 287 ---------------------------------------~~--~~~~fD~Ii~nppfh~~~~~~-----------~~--- 311 (375)
T 4dcm_A 287 ---------------------------------------GV--EPFRFNAVLCNPPFHQQHALT-----------DN--- 311 (375)
T ss_dssp ---------------------------------------TC--CTTCEEEEEECCCC------------------CC---
T ss_pred ---------------------------------------cC--CCCCeeEEEECCCcccCcccC-----------HH---
Confidence 11 246899999999998532110 01
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHH
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLIS 315 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~ 315 (420)
...+++++...+++++|.+.....+........+
T Consensus 312 -------~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~ 345 (375)
T 4dcm_A 312 -------VAWEMFHHARRCLKINGELYIVANRHLDYFHKLK 345 (375)
T ss_dssp -------HHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHH
T ss_pred -------HHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHH
Confidence 1336788888889999988776665555554433
No 20
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.43 E-value=7.1e-13 Score=127.44 Aligned_cols=123 Identities=17% Similarity=0.148 Sum_probs=97.9
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (420)
.+|||||||+|+|++.|+...+..+|+|+|||+.+++.|++|++.|+ +.++|+++.+|..
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l------------------- 82 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGL------------------- 82 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGG-------------------
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchh-------------------
Confidence 58999999999999888877667799999999999999999999995 8889999988742
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccccc
Q 014664 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~ 276 (420)
.++ .++++||+|+. +
T Consensus 83 ------------------------------------~~~-~~~~~~D~Ivi----------a------------------ 97 (244)
T 3gnl_A 83 ------------------------------------AVI-EKKDAIDTIVI----------A------------------ 97 (244)
T ss_dssp ------------------------------------GGC-CGGGCCCEEEE----------E------------------
T ss_pred ------------------------------------hcc-CccccccEEEE----------e------------------
Confidence 121 11235998873 1
Q ss_pred CchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEE
Q 014664 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVK 326 (420)
Q Consensus 277 GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~ 326 (420)
|-+-..+.+|++++...++.++|+ .+........+.+.|.+.|+..+.
T Consensus 98 gmGg~lI~~IL~~~~~~L~~~~~l--Ilq~~~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 98 GMGGTLIRTILEEGAAKLAGVTKL--ILQPNIAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp EECHHHHHHHHHHTGGGGTTCCEE--EEEESSCHHHHHHHHHHHTEEEEE
T ss_pred CCchHHHHHHHHHHHHHhCCCCEE--EEEcCCChHHHHHHHHHCCCEEEE
Confidence 112367899999999888888886 444467899999999999987543
No 21
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.42 E-value=2.1e-12 Score=128.75 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=114.5
Q ss_pred CCcEEEecCCceeCC--CCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 73 HGLNWWIPDGQLCPT--VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 73 fgl~~~vp~g~LiPr--vP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.|+.|.+++..--.+ .|....-..|+.+++... +...+|||+|||+|.+++.++.. +++|+|+|+|+.
T Consensus 117 ~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~~--------~~~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~ 186 (332)
T 2igt_A 117 LGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVETA--------DRPLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKK 186 (332)
T ss_dssp TTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHHS--------SSCCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHH
T ss_pred CCEEEEEecCccccceechHHHHHHHHHHHHHHhc--------CCCCcEEEcccccCHHHHHHHHc--CCEEEEEECCHH
Confidence 577777776544444 445666667888877521 12458999999999998777653 569999999999
Q ss_pred HHHHHHHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 151 ALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~-rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
|++.|++|++.|+ +.+ +++++.+|...
T Consensus 187 al~~a~~n~~~~g-l~~~~v~~i~~D~~~--------------------------------------------------- 214 (332)
T 2igt_A 187 AIGWAKENQVLAG-LEQAPIRWICEDAMK--------------------------------------------------- 214 (332)
T ss_dssp HHHHHHHHHHHHT-CTTSCEEEECSCHHH---------------------------------------------------
T ss_pred HHHHHHHHHHHcC-CCccceEEEECcHHH---------------------------------------------------
Confidence 9999999999985 765 59998776321
Q ss_pred CccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcC-
Q 014664 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS- 308 (420)
Q Consensus 230 ~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~- 308 (420)
++.......++||+|+||||||...... +++ .....+..+++++..+++++|++........
T Consensus 215 -~l~~~~~~~~~fD~Ii~dPP~~~~~~~~-------------~~~---~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~ 277 (332)
T 2igt_A 215 -FIQREERRGSTYDIILTDPPKFGRGTHG-------------EVW---QLFDHLPLMLDICREILSPKALGLVLTAYSIR 277 (332)
T ss_dssp -HHHHHHHHTCCBSEEEECCCSEEECTTC-------------CEE---EHHHHHHHHHHHHHHTBCTTCCEEEEEECCTT
T ss_pred -HHHHHHhcCCCceEEEECCccccCCchH-------------HHH---HHHHHHHHHHHHHHHhcCcCcEEEEEECCCCC
Confidence 1111111135899999999987643110 000 1345678889999999999998655544222
Q ss_pred -cHHHHHHHHH----HcCCc
Q 014664 309 -NLKFLISKLR----KVGVT 323 (420)
Q Consensus 309 -~l~~l~~~L~----~~g~~ 323 (420)
....+.+.++ +.|..
T Consensus 278 ~~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 278 ASFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp SCHHHHHHHHHHHTTTSCSE
T ss_pred CCHHHHHHHHHHHHHHcCCe
Confidence 3444555555 45653
No 22
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.42 E-value=3e-12 Score=129.97 Aligned_cols=152 Identities=14% Similarity=0.177 Sum_probs=104.7
Q ss_pred EEEecCCceeCCC--CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHH
Q 014664 76 NWWIPDGQLCPTV--PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (420)
Q Consensus 76 ~~~vp~g~LiPrv--P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~ 153 (420)
.+...+++....- |.+...+.++.+.+... .....+|||+|||+|.++..++.. +++|+|+|+|+.+++
T Consensus 199 ~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~-------~~~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~ 269 (381)
T 3dmg_A 199 TFHHLPGVFSAGKVDPASLLLLEALQERLGPE-------GVRGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVL 269 (381)
T ss_dssp EEEECTTCTTTTSCCHHHHHHHHHHHHHHCTT-------TTTTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHH
T ss_pred EEEeCCCceeCCCCCHHHHHHHHHHHHhhccc-------CCCCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHH
Confidence 4555666666331 33344555555554311 012458999999999998887765 679999999999999
Q ss_pred HHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014664 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLV 233 (420)
Q Consensus 154 ~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 233 (420)
.|++|++.|+ +. ++++.+|..+ .
T Consensus 270 ~A~~n~~~~~-~~--v~~~~~D~~~----------------------------------------------------~-- 292 (381)
T 3dmg_A 270 SLQKGLEANA-LK--AQALHSDVDE----------------------------------------------------A-- 292 (381)
T ss_dssp HHHHHHHHTT-CC--CEEEECSTTT----------------------------------------------------T--
T ss_pred HHHHHHHHcC-CC--eEEEEcchhh----------------------------------------------------c--
Confidence 9999999985 54 7888877431 0
Q ss_pred cccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHH
Q 014664 234 GVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313 (420)
Q Consensus 234 ~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l 313 (420)
...+++||+|+|||||+..... .......+++++..+++++|++.....+......+
T Consensus 293 --~~~~~~fD~Ii~npp~~~~~~~---------------------~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~ 349 (381)
T 3dmg_A 293 --LTEEARFDIIVTNPPFHVGGAV---------------------ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPL 349 (381)
T ss_dssp --SCTTCCEEEEEECCCCCTTCSS---------------------CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHH
T ss_pred --cccCCCeEEEEECCchhhcccc---------------------cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHH
Confidence 0123689999999999742110 12346688888999999999987777666656554
Q ss_pred HHH
Q 014664 314 ISK 316 (420)
Q Consensus 314 ~~~ 316 (420)
++.
T Consensus 350 l~~ 352 (381)
T 3dmg_A 350 LEE 352 (381)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 23
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.41 E-value=4e-13 Score=117.43 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=71.1
Q ss_pred hhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 70 ~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
-.++|..+.++++ ++ |....+..++.+.+... . ....+|||+|||+|.++..++.. +..++|+|+|+
T Consensus 7 g~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~-~------~~~~~vLD~GcG~G~~~~~l~~~--~~~v~~vD~~~ 73 (171)
T 1ws6_A 7 GKARGVALKVPAS---AR-PSPVRLRKALFDYLRLR-Y------PRRGRFLDPFAGSGAVGLEAASE--GWEAVLVEKDP 73 (171)
T ss_dssp GGGTTCEECCCTT---CC-CCCHHHHHHHHHHHHHH-C------TTCCEEEEETCSSCHHHHHHHHT--TCEEEEECCCH
T ss_pred cccCCeEecCCCC---CC-CCHHHHHHHHHHHHHhh-c------cCCCeEEEeCCCcCHHHHHHHHC--CCeEEEEeCCH
Confidence 4688999999999 55 56677887777777531 0 02358999999999988777765 34599999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 150 VALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 150 ~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
.+++.|++|++.++ + +++++..|
T Consensus 74 ~~~~~a~~~~~~~~-~--~~~~~~~d 96 (171)
T 1ws6_A 74 EAVRLLKENVRRTG-L--GARVVALP 96 (171)
T ss_dssp HHHHHHHHHHHHHT-C--CCEEECSC
T ss_pred HHHHHHHHHHHHcC-C--ceEEEecc
Confidence 99999999999885 5 68888766
No 24
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.41 E-value=6.8e-12 Score=113.09 Aligned_cols=116 Identities=12% Similarity=0.053 Sum_probs=85.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+...++... +..+++|+|+|+.+++.|++|++.++ +..+++++.+|...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------- 85 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQN---------------- 85 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGG----------------
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHH----------------
Confidence 3589999999999988887765 45799999999999999999999985 77789998876321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+ ... ..++||+|+|||||++..+.... .
T Consensus 86 ------------------------------------~-~~~--~~~~fD~v~~~~~~~~~~~~~~~----------~--- 113 (197)
T 3eey_A 86 ------------------------------------M-DKY--IDCPVKAVMFNLGYLPSGDHSIS----------T--- 113 (197)
T ss_dssp ------------------------------------G-GGT--CCSCEEEEEEEESBCTTSCTTCB----------C---
T ss_pred ------------------------------------H-hhh--ccCCceEEEEcCCcccCcccccc----------c---
Confidence 0 001 13689999999999764321110 0
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEe
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmv 304 (420)
...-...++++...+++++|++....
T Consensus 114 ----~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 114 ----RPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp ----CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 12234557888888889999876554
No 25
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.39 E-value=8.5e-13 Score=117.06 Aligned_cols=87 Identities=11% Similarity=0.001 Sum_probs=58.6
Q ss_pred EEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHH
Q 014664 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 77 ~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~ 156 (420)
+..|++ .+|| |.......++.+.+... ....+|||+|||+|.++..++.. +..+++|+|+|+.+++.|+
T Consensus 3 l~~p~~-~~~r-p~~~~~~~~~~~~l~~~--------~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 71 (177)
T 2esr_A 3 LKTLDG-KITR-PTSDKVRGAIFNMIGPY--------FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQ 71 (177)
T ss_dssp -----------------CHHHHHHHHCSC--------CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHH
T ss_pred ccCCCC-CCCC-cCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 345554 5777 66777777887777531 12458999999999987777655 5579999999999999999
Q ss_pred HHHHHCCCCCCcEEEEEcc
Q 014664 157 KNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 157 ~N~~~N~~l~~rI~l~~~d 175 (420)
+|++.++ +.++++++.+|
T Consensus 72 ~~~~~~~-~~~~~~~~~~d 89 (177)
T 2esr_A 72 DNIIMTK-AENRFTLLKME 89 (177)
T ss_dssp HHHHTTT-CGGGEEEECSC
T ss_pred HHHHHcC-CCCceEEEECc
Confidence 9999885 77789998776
No 26
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.39 E-value=6.8e-12 Score=114.10 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=100.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++...+..+++|+|+|+.+++.|++|++.++ + ++++++.+|...
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~----------------- 101 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFAPE----------------- 101 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCTTT-----------------
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCChhh-----------------
Confidence 458999999999998888887778999999999999999999999885 6 679999887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
.+ ...+.||+|+|++++. +
T Consensus 102 -----------------------------------~~----~~~~~~D~i~~~~~~~------------------~---- 120 (204)
T 3e05_A 102 -----------------------------------GL----DDLPDPDRVFIGGSGG------------------M---- 120 (204)
T ss_dssp -----------------------------------TC----TTSCCCSEEEESCCTT------------------C----
T ss_pred -----------------------------------hh----hcCCCCCEEEECCCCc------------------C----
Confidence 01 1125699999998762 1
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
+..++++...+++++|++........+...+.+.+++.|+ .+++.+.
T Consensus 121 -------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~ 167 (204)
T 3e05_A 121 -------LEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEVACV 167 (204)
T ss_dssp -------HHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred -------HHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeEEEE
Confidence 3467777888889999887766656788999999999998 5655543
No 27
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.39 E-value=8.1e-13 Score=135.77 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=73.0
Q ss_pred CcEEEecCCceeCCC-CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHH
Q 014664 74 GLNWWIPDGQLCPTV-PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVAL 152 (420)
Q Consensus 74 gl~~~vp~g~LiPrv-P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL 152 (420)
|++|.++++.++|+- +.++.++.|+.+.+.. ....+|||+|||+|.++..|+.. ..+|+|+|+|+.|+
T Consensus 253 g~~~~~~~~~f~q~n~~~~e~l~~~~~~~l~~---------~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al 321 (433)
T 1uwv_A 253 GLRLTFSPRDFIQVNAGVNQKMVARALEWLDV---------QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALV 321 (433)
T ss_dssp TEEEECCSSSCCCSBHHHHHHHHHHHHHHHTC---------CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHH
T ss_pred CEEEEECcccccccCHHHHHHHHHHHHHhhcC---------CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHH
Confidence 999999999999952 2244566666666542 12358999999999999888765 67999999999999
Q ss_pred HHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 153 EWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 153 ~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
+.|++|++.|+ +. +++++.+|..
T Consensus 322 ~~A~~n~~~~~-~~-~v~f~~~d~~ 344 (433)
T 1uwv_A 322 EKGQQNARLNG-LQ-NVTFYHENLE 344 (433)
T ss_dssp HHHHHHHHHTT-CC-SEEEEECCTT
T ss_pred HHHHHHHHHcC-CC-ceEEEECCHH
Confidence 99999999985 65 7999988753
No 28
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=6.3e-12 Score=112.20 Aligned_cols=145 Identities=15% Similarity=0.086 Sum_probs=91.5
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEE
Q 014664 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (420)
Q Consensus 94 yi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~ 173 (420)
.+.++..++.... ....+|||||||+|.+...|+.. +.+|+|+|+|+.+++.|++|++.++ + ++++++.
T Consensus 8 ~~~~~~~~l~~~~-------~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~ 76 (185)
T 3mti_A 8 PIHMSHDFLAEVL-------DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELIL 76 (185)
T ss_dssp HHHHHHHHHHTTC-------CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEE
T ss_pred HHHHHHHHHHHhC-------CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEe
Confidence 4556666665431 12458999999999998877765 7899999999999999999999885 6 6799887
Q ss_pred ccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCccc
Q 014664 174 VDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFE 253 (420)
Q Consensus 174 ~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~ 253 (420)
.+... +... .+++||+|++|+||++
T Consensus 77 ~~~~~-----------------------------------------------------l~~~--~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 77 DGHEN-----------------------------------------------------LDHY--VREPIRAAIFNLGYLP 101 (185)
T ss_dssp SCGGG-----------------------------------------------------GGGT--CCSCEEEEEEEEC---
T ss_pred CcHHH-----------------------------------------------------HHhh--ccCCcCEEEEeCCCCC
Confidence 43210 1111 1467999999999987
Q ss_pred CcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCC-----cCcHHHHHHHHHHcC
Q 014664 254 SMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR-----KSNLKFLISKLRKVG 321 (420)
Q Consensus 254 s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk-----~~~l~~l~~~L~~~g 321 (420)
.....-. . ...-...++++...+++++|++...+-. ......+.+.+....
T Consensus 102 ~~~~~~~--------------~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~ 157 (185)
T 3mti_A 102 SADKSVI--------------T---KPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLD 157 (185)
T ss_dssp -------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSC
T ss_pred Ccchhcc--------------c---ChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCC
Confidence 4321100 0 1122345677788888899987655431 122344555555543
No 29
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.38 E-value=1.2e-11 Score=112.25 Aligned_cols=123 Identities=18% Similarity=0.121 Sum_probs=95.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++. .+..+++|+|+|+.+++.|++|+..++ +.+ ++++..|...
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~-v~~~~~d~~~----------------- 120 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNG-IYD-IALQKTSLLA----------------- 120 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTT-CCC-CEEEESSTTT-----------------
T ss_pred CCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcC-CCc-eEEEeccccc-----------------
Confidence 45899999999998777654 455699999999999999999999885 655 8888876421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
. ..++||+|+||+|+.
T Consensus 121 -----------------------------------~------~~~~fD~i~~~~~~~----------------------- 136 (205)
T 3grz_A 121 -----------------------------------D------VDGKFDLIVANILAE----------------------- 136 (205)
T ss_dssp -----------------------------------T------CCSCEEEEEEESCHH-----------------------
T ss_pred -----------------------------------c------CCCCceEEEECCcHH-----------------------
Confidence 0 136899999999761
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEE-eCCcCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VGRKSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsm-vgk~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
.+.+++++...+++++|++... +. ..+...+.+.+++.|+..+.+.+
T Consensus 137 ------~~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 137 ------ILLDLIPQLDSHLNEDGQVIFSGID-YLQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp ------HHHHHGGGSGGGEEEEEEEEEEEEE-GGGHHHHHHHHHHTTEEEEEEEE
T ss_pred ------HHHHHHHHHHHhcCCCCEEEEEecC-cccHHHHHHHHHHcCCceEEeec
Confidence 1356777777888888877553 34 67899999999999998776655
No 30
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.37 E-value=6.6e-12 Score=119.79 Aligned_cols=146 Identities=13% Similarity=0.073 Sum_probs=108.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|++++.|+...++++|+|+|+|+++++.|++|++.++ +.+ |+++.+|..+
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l~~-v~~~~~d~~~----------------- 141 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG-LKG-ARALWGRAEV----------------- 141 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-CSS-EEEEECCHHH-----------------
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-CCc-eEEEECcHHH-----------------
Confidence 468999999999999999888889999999999999999999999985 754 9999886321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+. .-....++||+|+|+= + .+
T Consensus 142 -----------------------------------~~-~~~~~~~~fD~I~s~a----------------~---~~---- 162 (249)
T 3g89_A 142 -----------------------------------LA-REAGHREAYARAVARA----------------V---AP---- 162 (249)
T ss_dssp -----------------------------------HT-TSTTTTTCEEEEEEES----------------S---CC----
T ss_pred -----------------------------------hh-cccccCCCceEEEECC----------------c---CC----
Confidence 00 0000136899999941 0 11
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--CcHHHHHHHHHHcCCceEEEEEec-CC-CeeeEEEEEeecC
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEFV-QG-QTCRWGLAWSFVP 346 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~--~~l~~l~~~L~~~g~~~v~~~e~~-qG-~t~Rw~lAWsF~~ 346 (420)
+..+++++..+++++|.+..+.|.. ..+..+...+++.|+...++..+. .+ ...|.++.+....
T Consensus 163 -------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~ 230 (249)
T 3g89_A 163 -------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTA 230 (249)
T ss_dssp -------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred -------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCC
Confidence 3567888888999999998888843 345567778888998777666552 23 2368777777643
No 31
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.37 E-value=7.4e-12 Score=113.72 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=86.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++.. ...+++|+|+|+.+++.|++|++.++ + +++++.+|...
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~----------------- 108 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSE----------------- 108 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGG-----------------
T ss_pred cCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHH-----------------
Confidence 458999999999988777654 33479999999999999999999885 5 68888776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ .+.||+|+|||||+.... +.
T Consensus 109 ---------------------------------------~---~~~~D~v~~~~p~~~~~~------------~~----- 129 (207)
T 1wy7_A 109 ---------------------------------------F---NSRVDIVIMNPPFGSQRK------------HA----- 129 (207)
T ss_dssp ---------------------------------------C---CCCCSEEEECCCCSSSST------------TT-----
T ss_pred ---------------------------------------c---CCCCCEEEEcCCCccccC------------Cc-----
Confidence 0 137999999999975321 01
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCce
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~ 324 (420)
...++ ++...++ ++.|.+-+......+.+.+.+.+.|+..
T Consensus 130 ---~~~~l----~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 130 ---DRPFL----LKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp ---THHHH----HHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEE
T ss_pred ---hHHHH----HHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 23343 4444444 6666555555677888888999998753
No 32
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.37 E-value=1.1e-11 Score=119.69 Aligned_cols=119 Identities=8% Similarity=0.048 Sum_probs=90.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++..... +|+|+|+|+.|++.|++|++.|+ +.++++++.+|..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~----------------- 186 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRD----------------- 186 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTT-----------------
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHH-----------------
Confidence 358999999999998777765443 79999999999999999999995 88889998887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+. ..++||+|+||||+..
T Consensus 187 -----------------------------------~~-----~~~~fD~Vi~~~p~~~---------------------- 204 (278)
T 2frn_A 187 -----------------------------------FP-----GENIADRILMGYVVRT---------------------- 204 (278)
T ss_dssp -----------------------------------CC-----CCSCEEEEEECCCSSG----------------------
T ss_pred -----------------------------------hc-----ccCCccEEEECCchhH----------------------
Confidence 11 1468999999999642
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEe-C-----CcCcHHHHHHHHHHcCCc
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMV-G-----RKSNLKFLISKLRKVGVT 323 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmv-g-----k~~~l~~l~~~L~~~g~~ 323 (420)
..+++++..+++++|++.+.. + ....++.+.+.+++.|+.
T Consensus 205 --------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 205 --------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp --------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred --------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCe
Confidence 133445566777888765422 2 135678899999999985
No 33
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.37 E-value=6e-12 Score=114.08 Aligned_cols=142 Identities=13% Similarity=0.047 Sum_probs=103.6
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCc
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~r 168 (420)
|.+..++.++.+.+.... . -...+|||||||+|.++..++...++.+++|+|+|+.+++.|++|+..++ +.+
T Consensus 45 ~~~~~~~~~~~~~l~~~~--~----~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~- 116 (207)
T 1jsx_A 45 DPNEMLVRHILDSIVVAP--Y----LQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-LEN- 116 (207)
T ss_dssp ---CHHHHHHHHHHHHGG--G----CCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CSS-
T ss_pred CHHHHHHHHHHhhhhhhh--h----cCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-CCC-
Confidence 445667777777665320 0 01358999999999999888887788999999999999999999999885 655
Q ss_pred EEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEEC
Q 014664 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248 (420)
Q Consensus 169 I~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcN 248 (420)
++++..|... +. ..++||+|+||
T Consensus 117 v~~~~~d~~~----------------------------------------------------~~-----~~~~~D~i~~~ 139 (207)
T 1jsx_A 117 IEPVQSRVEE----------------------------------------------------FP-----SEPPFDGVISR 139 (207)
T ss_dssp EEEEECCTTT----------------------------------------------------SC-----CCSCEEEEECS
T ss_pred eEEEecchhh----------------------------------------------------CC-----ccCCcCEEEEe
Confidence 9998876431 00 13579999997
Q ss_pred CCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEE
Q 014664 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTT 328 (420)
Q Consensus 249 PPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~ 328 (420)
. + .+ +..++++...+++++|++..+.| ..+.+.+.+.++ |+..+++.
T Consensus 140 ~-~------------------~~-----------~~~~l~~~~~~L~~gG~l~~~~~-~~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 140 A-F------------------AS-----------LNDMVSWCHHLPGEQGRFYALKG-QMPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp C-S------------------SS-----------HHHHHHHHTTSEEEEEEEEEEES-SCCHHHHHTSCT--TEEEEEEE
T ss_pred c-c------------------CC-----------HHHHHHHHHHhcCCCcEEEEEeC-CCchHHHHHHhc--CCceeeee
Confidence 3 0 11 45777788888999999988988 567777776665 77666543
No 34
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.37 E-value=3.1e-12 Score=117.46 Aligned_cols=92 Identities=11% Similarity=-0.014 Sum_probs=66.3
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+.|..+.+|++ ..++ |....+...+.+.+... ....+|||+|||+|.++..++.+ ...+|+|+|+|+.
T Consensus 20 ~~~g~~l~~~~~-~~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlgcG~G~~~~~l~~~-~~~~V~~vD~s~~ 88 (202)
T 2fpo_A 20 QWRGRKLPVPDS-PGLR-PTTDRVRETLFNWLAPV--------IVDAQCLDCFAGSGALGLEALSR-YAAGATLIEMDRA 88 (202)
T ss_dssp GGTTCEEECCCC--------CHHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHH
T ss_pred EEcCcEecCCCC-CCCC-CCHHHHHHHHHHHHHhh--------cCCCeEEEeCCCcCHHHHHHHhc-CCCEEEEEECCHH
Confidence 567889999886 3555 55566666666666431 02358999999999987765544 2348999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
+++.|++|++.++ + .+|+++.+|
T Consensus 89 ~l~~a~~~~~~~~-~-~~v~~~~~D 111 (202)
T 2fpo_A 89 VSQQLIKNLATLK-A-GNARVVNSN 111 (202)
T ss_dssp HHHHHHHHHHHTT-C-CSEEEECSC
T ss_pred HHHHHHHHHHHcC-C-CcEEEEECC
Confidence 9999999999985 6 679998776
No 35
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.36 E-value=8e-12 Score=126.58 Aligned_cols=132 Identities=8% Similarity=0.065 Sum_probs=91.6
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-cEEEEEccCCCCCCcccccccCCccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE-LIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~-rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
.+|||+|||+|.+++.++.. ...+|+|+|+|+.|++.|++|++.|+ +.+ +++++.+|...
T Consensus 214 ~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~----------------- 274 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANH-LDMANHQLVVMDVFD----------------- 274 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTT-CCCTTEEEEESCHHH-----------------
T ss_pred CeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHH-----------------
Confidence 58999999999998877753 23489999999999999999999995 765 89999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
++......+++||+|+|||||+..... ....
T Consensus 275 -----------------------------------~l~~~~~~~~~fD~Ii~DPP~~~~~~~----------~~~~---- 305 (385)
T 2b78_A 275 -----------------------------------YFKYARRHHLTYDIIIIDPPSFARNKK----------EVFS---- 305 (385)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCCCC---------------CCCC----
T ss_pred -----------------------------------HHHHHHHhCCCccEEEECCCCCCCChh----------hHHH----
Confidence 111111124589999999999853211 0111
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcC-cHHHHHHHHHH
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKS-NLKFLISKLRK 319 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~-~l~~l~~~L~~ 319 (420)
.+..+.+++..+..+++++|++.+...... ..+.+.+.+++
T Consensus 306 ---~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 306 ---VSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp ---HHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 466788899999999999988765554332 23444444443
No 36
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=3e-11 Score=106.66 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=108.0
Q ss_pred eCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCC
Q 014664 85 CPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH 164 (420)
Q Consensus 85 iPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~ 164 (420)
+|+ |.+.....++.+.+.. ....+|||+|||+|.+...++... .+++|+|+|+.+++.|++|++.++
T Consensus 13 ~~~-~~~~~~~~~~~~~~~~---------~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~- 79 (192)
T 1l3i_A 13 VPG-PTAMEVRCLIMCLAEP---------GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHG- 79 (192)
T ss_dssp SCC-CCCHHHHHHHHHHHCC---------CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTT-
T ss_pred CCC-CChHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcC-
Confidence 454 4566677777776642 124589999999999877776554 799999999999999999999885
Q ss_pred CCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEE
Q 014664 165 ISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDF 244 (420)
Q Consensus 165 l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~ 244 (420)
+..+++++..|.. ..+ ...+.||+
T Consensus 80 ~~~~~~~~~~d~~-------------------------------------------------------~~~-~~~~~~D~ 103 (192)
T 1l3i_A 80 LGDNVTLMEGDAP-------------------------------------------------------EAL-CKIPDIDI 103 (192)
T ss_dssp CCTTEEEEESCHH-------------------------------------------------------HHH-TTSCCEEE
T ss_pred CCcceEEEecCHH-------------------------------------------------------Hhc-ccCCCCCE
Confidence 7668888877531 000 11147999
Q ss_pred EEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCce
Q 014664 245 CICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (420)
Q Consensus 245 imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~ 324 (420)
|+|++|+. + +..++++...+++++|++............+.+.+++.|+ .
T Consensus 104 v~~~~~~~------------------~-----------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~-~ 153 (192)
T 1l3i_A 104 AVVGGSGG------------------E-----------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGF-D 153 (192)
T ss_dssp EEESCCTT------------------C-----------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTC-C
T ss_pred EEECCchH------------------H-----------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCC-c
Confidence 99998751 0 2466777788888999887776667888899999999998 4
Q ss_pred EEEEE
Q 014664 325 VKTTE 329 (420)
Q Consensus 325 v~~~e 329 (420)
+++.+
T Consensus 154 ~~~~~ 158 (192)
T 1l3i_A 154 VNITE 158 (192)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 55443
No 37
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.35 E-value=1.2e-11 Score=122.92 Aligned_cols=133 Identities=18% Similarity=0.124 Sum_probs=96.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.+++. +. ...+|+|+|+|+.|++.|++|++.|+ +.++++++.+|...
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~----------------- 254 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVRE----------------- 254 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGG-----------------
T ss_pred CCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHH-----------------
Confidence 35899999999998776 54 57799999999999999999999995 87789999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
++ ++||+|++|||++..
T Consensus 255 -----------------------------------~~-------~~fD~Vi~dpP~~~~--------------------- 271 (336)
T 2yx1_A 255 -----------------------------------VD-------VKGNRVIMNLPKFAH--------------------- 271 (336)
T ss_dssp -----------------------------------CC-------CCEEEEEECCTTTGG---------------------
T ss_pred -----------------------------------hc-------CCCcEEEECCcHhHH---------------------
Confidence 11 579999999998631
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEE-EeCCcCcHHHHHHHHHHc-CCc--eEEEEEecCCCeeeEEEEEeec
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVGRKSNLKFLISKLRKV-GVT--IVKTTEFVQGQTCRWGLAWSFV 345 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~ts-mvgk~~~l~~l~~~L~~~-g~~--~v~~~e~~qG~t~Rw~lAWsF~ 345 (420)
.+++.+..+++++|++.+ ..... ...+.+.+++. ++. .++..+++..+ .|.+.|.|.
T Consensus 272 ---------~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~l~~~~~~~i~~~~~v~~~~p~--~~~~~~~~~ 332 (336)
T 2yx1_A 272 ---------KFIDKALDIVEEGGVIHYYTIGKD--FDKAIKLFEKKCDCEVLEKRIVKSYAPR--EYILALDFK 332 (336)
T ss_dssp ---------GGHHHHHHHEEEEEEEEEEEEESS--SHHHHHHHHHHSEEEEEEEEEEEEEETT--EEEEEEEEE
T ss_pred ---------HHHHHHHHHcCCCCEEEEEEeecC--chHHHHHHHHhcCCcEEEEEEEeccCCC--CCEEEEEEE
Confidence 345556667777876543 44433 66777777776 544 34566666666 344566654
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.35 E-value=1.2e-11 Score=111.69 Aligned_cols=57 Identities=25% Similarity=0.305 Sum_probs=51.4
Q ss_pred eEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+|||||||+|.+...|+.. ++.+++|+|+|+.+++.|+++++.++ +..+++++..|.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 102 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDV 102 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBT
T ss_pred EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCH
Confidence 8999999999988888766 78899999999999999999999985 777899998874
No 39
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.35 E-value=2.9e-12 Score=117.49 Aligned_cols=94 Identities=11% Similarity=-0.022 Sum_probs=63.9
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+.|..+.+|++. .++ |....+...+.+.+... ....+|||+|||+|.++..++.+ ...+|+|+|+|+.
T Consensus 19 ~~~g~~l~~~~~~-~~r-p~~~~~~~~l~~~l~~~--------~~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~ 87 (201)
T 2ift_A 19 LWRGRKLPVLNSE-GLR-PTGDRVKETLFNWLMPY--------IHQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKT 87 (201)
T ss_dssp TTTTCEEECC-----------CHHHHHHHHHHHHH--------HTTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHH
T ss_pred eeCCcEecCCCCC-CcC-cCHHHHHHHHHHHHHHh--------cCCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHH
Confidence 5678888888863 444 44455555555555421 02358999999999987765544 3358999999999
Q ss_pred HHHHHHHHHHHCCCCC-CcEEEEEccC
Q 014664 151 ALEWAEKNVKSNPHIS-ELIEIRKVDN 176 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~-~rI~l~~~d~ 176 (420)
+++.|++|++.++ +. ++++++.+|.
T Consensus 88 ~l~~a~~~~~~~~-~~~~~v~~~~~d~ 113 (201)
T 2ift_A 88 VANQLKKNLQTLK-CSSEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHHHTT-CCTTTEEEECSCH
T ss_pred HHHHHHHHHHHhC-CCccceEEEECCH
Confidence 9999999999985 64 5799987763
No 40
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=4.6e-11 Score=104.92 Aligned_cols=149 Identities=17% Similarity=0.103 Sum_probs=104.0
Q ss_pred EEecCCceeCC---CCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHH
Q 014664 77 WWIPDGQLCPT---VPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALE 153 (420)
Q Consensus 77 ~~vp~g~LiPr---vP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~ 153 (420)
|.+|++..... .|.......++.+.+.. ....+|||+|||+|.+...++. +..+++|+|+|+.+++
T Consensus 3 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~ 71 (183)
T 2yxd_A 3 YMIPDEEFIRREGVPITKEEIRAVSIGKLNL---------NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIE 71 (183)
T ss_dssp -CCCSTTSCCBTTBCCCCHHHHHHHHHHHCC---------CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHH
T ss_pred ccCCchheeeccCCCcCHHHHHHHHHHHcCC---------CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHH
Confidence 44555444321 24456677777777642 1245899999999998777765 7889999999999999
Q ss_pred HHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 014664 154 WAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLV 233 (420)
Q Consensus 154 ~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 233 (420)
.|++|++.++ + .+++++..|.. .
T Consensus 72 ~a~~~~~~~~-~-~~~~~~~~d~~-------------------------------------------------------~ 94 (183)
T 2yxd_A 72 VTKQNLAKFN-I-KNCQIIKGRAE-------------------------------------------------------D 94 (183)
T ss_dssp HHHHHHHHTT-C-CSEEEEESCHH-------------------------------------------------------H
T ss_pred HHHHHHHHcC-C-CcEEEEECCcc-------------------------------------------------------c
Confidence 9999999985 6 46888877631 1
Q ss_pred cccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHH
Q 014664 234 GVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFL 313 (420)
Q Consensus 234 ~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l 313 (420)
.+ +.+.||+|+||+| .+ ...++++...+ ++|++........++..+
T Consensus 95 ~~--~~~~~D~i~~~~~-------------------~~-----------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~ 140 (183)
T 2yxd_A 95 VL--DKLEFNKAFIGGT-------------------KN-----------IEKIIEILDKK--KINHIVANTIVLENAAKI 140 (183)
T ss_dssp HG--GGCCCSEEEECSC-------------------SC-----------HHHHHHHHHHT--TCCEEEEEESCHHHHHHH
T ss_pred cc--cCCCCcEEEECCc-------------------cc-----------HHHHHHHHhhC--CCCEEEEEecccccHHHH
Confidence 11 1257999999998 01 22444445555 677766665557889999
Q ss_pred HHHHHHcCCceEEEE
Q 014664 314 ISKLRKVGVTIVKTT 328 (420)
Q Consensus 314 ~~~L~~~g~~~v~~~ 328 (420)
.+.|++.|+ .++..
T Consensus 141 ~~~l~~~g~-~~~~~ 154 (183)
T 2yxd_A 141 INEFESRGY-NVDAV 154 (183)
T ss_dssp HHHHHHTTC-EEEEE
T ss_pred HHHHHHcCC-eEEEE
Confidence 999999996 34443
No 41
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.30 E-value=1.8e-11 Score=116.63 Aligned_cols=122 Identities=16% Similarity=0.087 Sum_probs=92.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++.. +.+++|+|+|+.+++.|++|++.|+ +. ++++.+|..
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~--g~~v~gvDi~~~~v~~a~~n~~~~~-~~--v~~~~~d~~------------------ 177 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL--GGKALGVDIDPMVLPQAEANAKRNG-VR--PRFLEGSLE------------------ 177 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCGGGHHHHHHHHHHTT-CC--CEEEESCHH------------------
T ss_pred CCEEEEecCCCcHHHHHHHHh--CCeEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEECChh------------------
Confidence 358999999999987766543 3499999999999999999999985 64 777766521
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
..+ +.++||+|+||+++.
T Consensus 178 -------------------------------------~~~--~~~~fD~Vv~n~~~~----------------------- 195 (254)
T 2nxc_A 178 -------------------------------------AAL--PFGPFDLLVANLYAE----------------------- 195 (254)
T ss_dssp -------------------------------------HHG--GGCCEEEEEEECCHH-----------------------
T ss_pred -------------------------------------hcC--cCCCCCEEEECCcHH-----------------------
Confidence 111 135799999998641
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEE-EeCCcCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTS-MVGRKSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~ts-mvgk~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
.+..++.+...+++++|++.. .+. ..+...+.+.+++.|+..+.+.+
T Consensus 196 ------~~~~~l~~~~~~LkpgG~lils~~~-~~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 196 ------LHAALAPRYREALVPGGRALLTGIL-KDRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp ------HHHHHHHHHHHHEEEEEEEEEEEEE-GGGHHHHHHHHHHTTCEEEEEEE
T ss_pred ------HHHHHHHHHHHHcCCCCEEEEEeec-cCCHHHHHHHHHHCCCEEEEEec
Confidence 135677777888888887654 333 67899999999999998777665
No 42
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.30 E-value=5.4e-11 Score=111.44 Aligned_cols=143 Identities=10% Similarity=0.050 Sum_probs=101.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.++..|+...++.+|+|+|+|+++++.|++|++.++ +. +|+++.+|..+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~----------------- 131 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ-LE-NTTFCHDRAET----------------- 131 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-CS-SEEEEESCHHH-----------------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-CEEEEeccHHH-----------------
Confidence 458999999999988888876788999999999999999999999885 65 49999886321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+... ....++||+|+|+.. .+
T Consensus 132 -----------------------------------~~~~-~~~~~~fD~V~~~~~-------------------~~---- 152 (240)
T 1xdz_A 132 -----------------------------------FGQR-KDVRESYDIVTARAV-------------------AR---- 152 (240)
T ss_dssp -----------------------------------HTTC-TTTTTCEEEEEEECC-------------------SC----
T ss_pred -----------------------------------hccc-ccccCCccEEEEecc-------------------CC----
Confidence 0000 001357999999440 11
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--CcHHHHHHHHHHcCCceEEEEEecCC--CeeeEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEFVQG--QTCRWGLAWS 343 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~--~~l~~l~~~L~~~g~~~v~~~e~~qG--~t~Rw~lAWs 343 (420)
+..++++...+++++|++..+.|.. ..+..+.+.+++.|+..+.+..+... ...|.++.+.
T Consensus 153 -------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 153 -------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIR 217 (240)
T ss_dssp -------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred -------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEE
Confidence 5577888888999999988777733 23456777888999876666554333 2245444443
No 43
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.29 E-value=4e-11 Score=112.48 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=102.0
Q ss_pred CCeEEEECCchhHHHHHHHHh-hcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~-~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+...++.. .++.+++|+|+++++++.|++|++.++ +.++++++..|..+
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~---------------- 156 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYE---------------- 156 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGG----------------
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhh----------------
Confidence 458999999999998888877 457899999999999999999999885 77789998776321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
.+ .++.||+|+||||..
T Consensus 157 ---------------------------------------~~--~~~~~D~v~~~~~~~---------------------- 173 (255)
T 3mb5_A 157 ---------------------------------------GI--EEENVDHVILDLPQP---------------------- 173 (255)
T ss_dssp ---------------------------------------CC--CCCSEEEEEECSSCG----------------------
T ss_pred ---------------------------------------cc--CCCCcCEEEECCCCH----------------------
Confidence 11 235799999999821
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcC--CceEEEEEec
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG--VTIVKTTEFV 331 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g--~~~v~~~e~~ 331 (420)
..++++...+++++|++........+...+.+.|++.| +..+++.+..
T Consensus 174 ---------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 174 ---------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp ---------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred ---------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 13455667788889988777766788999999999999 9888887754
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.29 E-value=1.7e-11 Score=113.45 Aligned_cols=140 Identities=9% Similarity=0.132 Sum_probs=100.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...|+...++++++|+|+|+.+++.|++|++.++ + .+|.++.+|...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~-~-~nv~~~~~d~~~----------------- 99 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-A-QNVKLLNIDADT----------------- 99 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-C-SSEEEECCCGGG-----------------
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC-C-CCEEEEeCCHHH-----------------
Confidence 458999999999999999888889999999999999999999999885 6 458988776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCC--cccCcccccCCCCcccCCCCCcc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP--FFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPP--F~~s~eea~~eP~~a~~G~~~Em 273 (420)
+.... +...||.|++|.| +.....+ +..
T Consensus 100 ------------------------------------l~~~~-~~~~~d~v~~~~~~p~~~~~~~----~~r--------- 129 (213)
T 2fca_A 100 ------------------------------------LTDVF-EPGEVKRVYLNFSDPWPKKRHE----KRR--------- 129 (213)
T ss_dssp ------------------------------------HHHHC-CTTSCCEEEEESCCCCCSGGGG----GGS---------
T ss_pred ------------------------------------HHhhc-CcCCcCEEEEECCCCCcCcccc----ccc---------
Confidence 10101 2356899988854 3221110 000
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEec
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFV 331 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~ 331 (420)
.+...++++...+++++|++............+.+.+.+.|+..+.+..|+
T Consensus 130 -------l~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~~~d~ 180 (213)
T 2fca_A 130 -------LTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLDL 180 (213)
T ss_dssp -------TTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESSG
T ss_pred -------cCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccccccc
Confidence 013466777788889999987776545667788889999998766666554
No 45
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.28 E-value=4.8e-11 Score=120.77 Aligned_cols=136 Identities=17% Similarity=0.088 Sum_probs=91.9
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCC-CCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
.+|||+|||+|.+++.++.. ...+|+|+|+|+.|++.|++|++.|+ + .++++++.+|...
T Consensus 222 ~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~----------------- 282 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFK----------------- 282 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHH-----------------
T ss_pred CeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHH-----------------
Confidence 58999999999998777654 24589999999999999999999995 7 6689999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
++......+++||+|+|||||+...... ...
T Consensus 283 -----------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~------~~~-------- 313 (396)
T 3c0k_A 283 -----------------------------------LLRTYRDRGEKFDVIVMDPPKFVENKSQ------LMG-------- 313 (396)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCSSTTTCSSS------SSC--------
T ss_pred -----------------------------------HHHHHHhcCCCCCEEEECCCCCCCChhH------HHH--------
Confidence 1111111245899999999998643211 111
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc-Cc----HHHHHHHHHHcCCc
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK-SN----LKFLISKLRKVGVT 323 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~-~~----l~~l~~~L~~~g~~ 323 (420)
...-+..++.++..+++++|++.+..... -. .+.+.+.+.+.|..
T Consensus 314 ---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 363 (396)
T 3c0k_A 314 ---ACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRD 363 (396)
T ss_dssp ---CCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred ---HHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCe
Confidence 11235677778888888888765443322 12 23334466677754
No 46
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.28 E-value=3.4e-11 Score=121.20 Aligned_cols=139 Identities=16% Similarity=0.015 Sum_probs=98.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHC-----C-CCCCcEEEEEccCCCCCCcccccc
Q 014664 115 DKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-----P-HISELIEIRKVDNSESTPSIQESL 187 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N-----~-~l~~rI~l~~~d~~~~~p~~~~~~ 187 (420)
...+|||||||+|.+...|+... ++++++|+|+|+.+++.|++|++.+ + ....+|+++..|.....
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~------- 155 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLA------- 155 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGG-------
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhh-------
Confidence 34689999999999988888776 6789999999999999999998764 1 11257999988753200
Q ss_pred cCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccC
Q 014664 188 TGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCG 267 (420)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~ 267 (420)
. +.....++++||+|+||..+...
T Consensus 156 ------------------------------------------~-~~~~~~~~~~fD~V~~~~~l~~~------------- 179 (383)
T 4fsd_A 156 ------------------------------------------T-AEPEGVPDSSVDIVISNCVCNLS------------- 179 (383)
T ss_dssp ------------------------------------------G-CBSCCCCTTCEEEEEEESCGGGC-------------
T ss_pred ------------------------------------------h-cccCCCCCCCEEEEEEccchhcC-------------
Confidence 0 00000124689999999766531
Q ss_pred CCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEE-eC---------------------CcCcHHHHHHHHHHcCCceE
Q 014664 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSM-VG---------------------RKSNLKFLISKLRKVGVTIV 325 (420)
Q Consensus 268 G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsm-vg---------------------k~~~l~~l~~~L~~~g~~~v 325 (420)
.+ ...++++...+++++|++... +. ..-..+.+.++|++.|+..+
T Consensus 180 --~d-----------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v 246 (383)
T 4fsd_A 180 --TN-----------KLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEAGFRDV 246 (383)
T ss_dssp --SC-----------HHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHTTCCCE
T ss_pred --CC-----------HHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHCCCceE
Confidence 11 236777778888888887553 22 12345889999999999887
Q ss_pred EEEE
Q 014664 326 KTTE 329 (420)
Q Consensus 326 ~~~e 329 (420)
++.+
T Consensus 247 ~~~~ 250 (383)
T 4fsd_A 247 RLVS 250 (383)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7655
No 47
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.28 E-value=9.9e-11 Score=108.87 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=101.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|++|++.++ +..+++++.+|..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~----------------- 138 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLL----------------- 138 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHH-----------------
Confidence 458999999999998877754 5899999999999999999999985 76789999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+. ..++||+|+|||||........ . ......+..
T Consensus 139 -----------------------------------~~-----~~~~~D~v~~~~~~~~~~~~~~-----~-~~~~~~~L~ 172 (241)
T 3gdh_A 139 -----------------------------------LA-----SFLKADVVFLSPPWGGPDYATA-----E-TFDIRTMMS 172 (241)
T ss_dssp -----------------------------------HG-----GGCCCSEEEECCCCSSGGGGGS-----S-SBCTTTSCS
T ss_pred -----------------------------------hc-----ccCCCCEEEECCCcCCcchhhh-----H-HHHHHhhcC
Confidence 00 2358999999999986433211 1 112334556
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGL 340 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~l 340 (420)
+||- . +++....+.....+ .+.+...+..+...|...|...+. ....+|...+..+
T Consensus 173 pgG~-~----i~~~~~~~~~~~~~---~lp~~~~~~~~~~~l~~~g~~~i~-~~~~~~~~k~~~~ 228 (241)
T 3gdh_A 173 PDGF-E----IFRLSKKITNNIVY---FLPRNADIDQVASLAGPGGQVEIE-QNFLNNKLKTITA 228 (241)
T ss_dssp SCHH-H----HHHHHHHHCSCEEE---EEETTBCHHHHHHTTCTTCCEEEE-EEEETTEEEEEEE
T ss_pred Ccce-e----HHHHHHhhCCceEE---ECCCCCCHHHHHHHhccCCCEEEE-ehhhcCccceEEE
Confidence 6664 2 23333444444333 345567788888888777765443 3345676555433
No 48
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.28 E-value=4.2e-11 Score=118.65 Aligned_cols=172 Identities=12% Similarity=0.075 Sum_probs=112.5
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+||..+.+...+++|+ +....|-+.+..+.... . ..+.+|||||||+|+++..++...+..+++++|+|++
T Consensus 80 ~~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~ 151 (321)
T 2pt6_A 80 TTYGKVLVLDGVIQLTE-KDEFAYHEMMTHVPMTV-S------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDET 151 (321)
T ss_dssp SSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHHH-S------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHH
T ss_pred CCCcEEEEECCEeeeCc-ccchHHHHHHHHHHHhc-C------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHH
Confidence 57899999999999998 44444544444321111 0 1246899999999999888876556789999999999
Q ss_pred HHHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 151 ALEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYH 227 (420)
Q Consensus 151 AL~~A~~N~~~--N~~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
+++.|++|+.. ++ + ..+++++.+|..+
T Consensus 152 ~l~~ar~~~~~~~~~-~~~~~v~~~~~D~~~------------------------------------------------- 181 (321)
T 2pt6_A 152 VIEVSKIYFKNISCG-YEDKRVNVFIEDASK------------------------------------------------- 181 (321)
T ss_dssp HHHHHHHHCTTTSGG-GGSTTEEEEESCHHH-------------------------------------------------
T ss_pred HHHHHHHHHHhhccc-cCCCcEEEEEccHHH-------------------------------------------------
Confidence 99999999875 21 3 3579998876321
Q ss_pred CCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc
Q 014664 228 GPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK 307 (420)
Q Consensus 228 ~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~ 307 (420)
.+. ...++||+|+||||-. ..|...+ +-..++++..+.++++|++....+..
T Consensus 182 ---~l~---~~~~~fDvIi~d~~~p-------~~~~~~l---------------~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 182 ---FLE---NVTNTYDVIIVDSSDP-------IGPAETL---------------FNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp ---HHH---HCCSCEEEEEEECCCS-------SSGGGGG---------------SSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ---HHh---hcCCCceEEEECCcCC-------CCcchhh---------------hHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 011 1246799999998411 0111000 01455666778899999998776532
Q ss_pred ----CcHHHHHHHHHHcCCceEEEEE
Q 014664 308 ----SNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 308 ----~~l~~l~~~L~~~g~~~v~~~e 329 (420)
..+..+.+.+++. +..++...
T Consensus 234 ~~~~~~~~~~~~~l~~~-F~~v~~~~ 258 (321)
T 2pt6_A 234 WIHVGTIKNMIGYAKKL-FKKVEYAN 258 (321)
T ss_dssp TTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ccCHHHHHHHHHHHHHH-CCCeEEEE
Confidence 2345666666665 44555443
No 49
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.27 E-value=8.5e-11 Score=109.19 Aligned_cols=124 Identities=12% Similarity=0.102 Sum_probs=95.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.+...++.. +.+++++|+++.+++.|++|.+.++ +..+++++..|..+
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~----------------- 151 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKD----------------- 151 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTT-----------------
T ss_pred CCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhh-----------------
Confidence 458999999999998877766 7899999999999999999999884 76788888766421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
.+ ..++.||+|++|||- |
T Consensus 152 -----------------------------------~~----~~~~~~D~v~~~~~~----------~------------- 169 (248)
T 2yvl_A 152 -----------------------------------AE----VPEGIFHAAFVDVRE----------P------------- 169 (248)
T ss_dssp -----------------------------------SC----CCTTCBSEEEECSSC----------G-------------
T ss_pred -----------------------------------cc----cCCCcccEEEECCcC----------H-------------
Confidence 00 013579999999871 1
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
..++++...+++++|++........++..+.+.|++. +..+++.+.
T Consensus 170 --------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 215 (248)
T 2yvl_A 170 --------WHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FGNLEVVEI 215 (248)
T ss_dssp --------GGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EEEEEEEEE
T ss_pred --------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCcceEEEe
Confidence 1234555677888999888888677888888888877 776666654
No 50
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.27 E-value=5.1e-11 Score=121.02 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=58.8
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcC-----------------------------
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~----------------------------- 139 (420)
|-+++....+..+... .....+||.|||||.+.+.++....+
T Consensus 178 pl~e~lAa~ll~~~~~---------~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a 248 (385)
T 3ldu_A 178 PIRETLAAGLIYLTPW---------KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDA 248 (385)
T ss_dssp CCCHHHHHHHHHTSCC---------CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC---------CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHH
Confidence 6677766555443321 12357999999999887666544222
Q ss_pred ---------CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 140 ---------~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+|+|+|+|+.|++.|++|++.++ +.+.|++...|.
T Consensus 249 ~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~g-l~~~i~~~~~D~ 293 (385)
T 3ldu_A 249 FNKIDNESKFKIYGYDIDEESIDIARENAEIAG-VDEYIEFNVGDA 293 (385)
T ss_dssp HHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCG
T ss_pred HHHhhccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 579999999999999999999995 888899998874
No 51
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.27 E-value=2.5e-10 Score=105.11 Aligned_cols=119 Identities=11% Similarity=-0.002 Sum_probs=92.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++.. +.+|+|+|+|+++++.|++|++.++ +.++++++.+|...
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~----------------- 115 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQGTAPA----------------- 115 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCTTG-----------------
T ss_pred CCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeCchhh-----------------
Confidence 458999999999988777765 8899999999999999999999985 77689999887421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
.+ ...+.||+|++++.. +
T Consensus 116 -----------------------------------~~----~~~~~~D~v~~~~~~-------------------~---- 133 (204)
T 3njr_A 116 -----------------------------------AL----ADLPLPEAVFIGGGG-------------------S---- 133 (204)
T ss_dssp -----------------------------------GG----TTSCCCSEEEECSCC-------------------C----
T ss_pred -----------------------------------hc----ccCCCCCEEEECCcc-------------------c----
Confidence 01 112469999987622 1
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCce
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTI 324 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~ 324 (420)
.. ++++...+++++|++.......+++..+.+.+++.|+..
T Consensus 134 -------~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 134 -------QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQL 174 (204)
T ss_dssp -------HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEE
T ss_pred -------HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcE
Confidence 22 566677788888887766666788999999999999653
No 52
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.26 E-value=6.8e-11 Score=117.34 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=88.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.++..++...+.++++|+|+|+.+++.|++|+..++ +. ++++..|...
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~-~~--~~~~~~d~~~----------------- 256 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG-VE--GEVFASNVFS----------------- 256 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT-CC--CEEEECSTTT-----------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC-CC--CEEEEccccc-----------------
Confidence 348999999999999888888778899999999999999999999885 54 4555554321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
. ..++||+|+|||||+.... .
T Consensus 257 --------------------------------------~---~~~~fD~Iv~~~~~~~g~~--------------~---- 277 (343)
T 2pjd_A 257 --------------------------------------E---VKGRFDMIISNPPFHDGMQ--------------T---- 277 (343)
T ss_dssp --------------------------------------T---CCSCEEEEEECCCCCSSSH--------------H----
T ss_pred --------------------------------------c---ccCCeeEEEECCCcccCcc--------------C----
Confidence 0 1357999999999974211 0
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHH
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISK 316 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~ 316 (420)
...-..+++++...+++++|++............+...
T Consensus 278 ---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~ 315 (343)
T 2pjd_A 278 ---SLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDE 315 (343)
T ss_dssp ---HHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHH
Confidence 23346788889999999999987766555455544443
No 53
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.26 E-value=3e-11 Score=119.83 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=93.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-----CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-----WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGK 190 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-----~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~ 190 (420)
..+|||+|||+|.+...++...+. .+++|+|+|+.++++|+.|+..++ + .+.++.+|...
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~------------ 195 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLA------------ 195 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTS------------
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCC------------
Confidence 468999999999998888777654 789999999999999999999874 5 57788776421
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcc--cCccc-ccCCCCcccC
Q 014664 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFF--ESMEE-AGLNPKTSCG 267 (420)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~--~s~ee-a~~eP~~a~~ 267 (420)
.. ..++||+|||||||. +..+. ..++|..
T Consensus 196 -------------------------------------------~~--~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~--- 227 (344)
T 2f8l_A 196 -------------------------------------------NL--LVDPVDVVISDLPVGYYPDDENAKTFELCR--- 227 (344)
T ss_dssp -------------------------------------------CC--CCCCEEEEEEECCCSEESCHHHHTTSTTCC---
T ss_pred -------------------------------------------cc--ccCCccEEEECCCCCCcCchhhhhhccccC---
Confidence 00 135799999999973 22111 1122211
Q ss_pred CCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEe-----CCcCcHHHHHHHHHHcCC
Q 014664 268 GTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV-----GRKSNLKFLISKLRKVGV 322 (420)
Q Consensus 268 G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmv-----gk~~~l~~l~~~L~~~g~ 322 (420)
..|-......+++.+..+++++|++.+.+ + ..+...+.+.|.+.+.
T Consensus 228 --------~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~-~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 228 --------EEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFG-TSDFAKVDKFIKKNGH 278 (344)
T ss_dssp --------SSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGG-STTHHHHHHHHHHHEE
T ss_pred --------CCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcC-CchHHHHHHHHHhCCe
Confidence 11111122345556667788888887776 3 4567888888888765
No 54
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=1.3e-10 Score=118.22 Aligned_cols=78 Identities=15% Similarity=0.113 Sum_probs=58.9
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcC-----------------------------
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~----------------------------- 139 (420)
|-++++..-+..+... .....++|.+||||.|.+..+....+
T Consensus 177 pl~e~LAaall~l~~~---------~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a 247 (384)
T 3ldg_A 177 PIKENMAAAIILLSNW---------FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEA 247 (384)
T ss_dssp CCCHHHHHHHHHHTTC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCC---------CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHH
Confidence 6677766554444332 12357999999999987666543322
Q ss_pred ---------CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 140 ---------~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+++|+|+|+.|++.|++|++.++ +.++|+++..|.
T Consensus 248 ~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~g-l~~~I~~~~~D~ 292 (384)
T 3ldg_A 248 DEQADYDIQLDISGFDFDGRMVEIARKNAREVG-LEDVVKLKQMRL 292 (384)
T ss_dssp HHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCG
T ss_pred HHhhhccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 469999999999999999999995 888899998874
No 55
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=1.9e-10 Score=110.88 Aligned_cols=89 Identities=11% Similarity=-0.025 Sum_probs=66.2
Q ss_pred cCCcEEEecCCc--eeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 72 DHGLNWWIPDGQ--LCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 72 ffgl~~~vp~g~--LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
..|+.|.++++. +.|+. .... +. ++.. + ....+|||+|||+|.++..++...+..+|+|+|+++
T Consensus 88 e~g~~f~~~~~~~f~~~~~----~~e~-~~-~~~~--~------~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~ 153 (272)
T 3a27_A 88 EYGCLFKLDVAKIMWSQGN----IEER-KR-MAFI--S------NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP 153 (272)
T ss_dssp ETTEEEEEETTTSCCCGGG----HHHH-HH-HHTS--C------CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH
T ss_pred ECCEEEEEechhEEECCCc----hHHH-HH-HHHh--c------CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH
Confidence 378899998887 66662 1111 11 1221 1 123589999999999998888776677999999999
Q ss_pred HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 150 VALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 150 ~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.|++.|++|++.|+ +. ++.++.+|.
T Consensus 154 ~av~~a~~n~~~n~-l~-~~~~~~~d~ 178 (272)
T 3a27_A 154 TAYHYLCENIKLNK-LN-NVIPILADN 178 (272)
T ss_dssp HHHHHHHHHHHHTT-CS-SEEEEESCG
T ss_pred HHHHHHHHHHHHcC-CC-CEEEEECCh
Confidence 99999999999995 65 477887764
No 56
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.25 E-value=1.8e-10 Score=108.89 Aligned_cols=59 Identities=15% Similarity=0.102 Sum_probs=52.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +..+++|+|+|+.+++.|+++++.++ +.++|+++..|.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 105 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSG-LQNRVTGIVGSM 105 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcC-CCcCcEEEEcCh
Confidence 468999999999988777765 77799999999999999999999885 888899998875
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.25 E-value=1.3e-10 Score=102.14 Aligned_cols=123 Identities=13% Similarity=0.009 Sum_probs=92.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++...++.+++|+|+|+.+++.|++|++.++ +.+++ ++..|...
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~----------------- 86 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPR----------------- 86 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTG-----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHh-----------------
Confidence 458999999999998888877778999999999999999999999885 76678 77665321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
.+. ...+.||+|+|+.++..
T Consensus 87 -----------------------------------~~~---~~~~~~D~i~~~~~~~~---------------------- 106 (178)
T 3hm2_A 87 -----------------------------------AFD---DVPDNPDVIFIGGGLTA---------------------- 106 (178)
T ss_dssp -----------------------------------GGG---GCCSCCSEEEECC-TTC----------------------
T ss_pred -----------------------------------hhh---ccCCCCCEEEECCcccH----------------------
Confidence 011 11267999999988731
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIV 325 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v 325 (420)
..++++...+++++|++........+...+...+++.|....
T Consensus 107 --------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 107 --------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp --------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred --------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 235556667788888876555546778888999999886533
No 58
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.25 E-value=1.9e-10 Score=107.34 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=61.6
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCc
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~r 168 (420)
|....++.++.+.+.. ....+|||||||+|.+...|+... +.+++|+|+|+.+++.|+++++.++ +.++
T Consensus 19 ~~~~~~~~~l~~~~~~---------~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~ 87 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRM---------KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELG-VSER 87 (256)
T ss_dssp SCCHHHHHHHHHHTCC---------CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTT-CTTT
T ss_pred CCCHHHHHHHHHhcCC---------CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcC-CCcc
Confidence 4456677777666542 124589999999999887777665 7899999999999999999999885 7778
Q ss_pred EEEEEccC
Q 014664 169 IEIRKVDN 176 (420)
Q Consensus 169 I~l~~~d~ 176 (420)
|+++.+|.
T Consensus 88 v~~~~~d~ 95 (256)
T 1nkv_A 88 VHFIHNDA 95 (256)
T ss_dssp EEEEESCC
T ss_pred eEEEECCh
Confidence 99998874
No 59
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.25 E-value=2.9e-10 Score=106.11 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=95.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.....++...+. +++|+|+|+.+++.|++++..++ +.++++++..|...
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~----------------- 107 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKAN-CADRVKGITGSMDN----------------- 107 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTS-----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChhh-----------------
Confidence 358999999999998888776654 99999999999999999999985 88889999887521
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ...+++||+|+|+-.++.- +
T Consensus 108 -----------------------------------~----~~~~~~fD~v~~~~~l~~~----------------~---- 128 (257)
T 3f4k_A 108 -----------------------------------L----PFQNEELDLIWSEGAIYNI----------------G---- 128 (257)
T ss_dssp -----------------------------------C----SSCTTCEEEEEEESCSCCC----------------C----
T ss_pred -----------------------------------C----CCCCCCEEEEEecChHhhc----------------C----
Confidence 0 0124689999999765431 0
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEe--------------------CCcCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMV--------------------GRKSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmv--------------------gk~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
...++++...+++++|++.... ....+...+.+.|++.|+..+.+..
T Consensus 129 -------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 129 -------FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFI 195 (257)
T ss_dssp -------HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred -------HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 1245566667777777664432 1123567889999999998776543
No 60
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.24 E-value=1.1e-10 Score=118.85 Aligned_cols=78 Identities=18% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcC-----------------------------
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG----------------------------- 139 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~----------------------------- 139 (420)
|-+++...-+..+... .....+||.|||||.+.+.++....+
T Consensus 184 pl~e~lAa~ll~l~~~---------~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a 254 (393)
T 3k0b_A 184 PIKETMAAALVLLTSW---------HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEA 254 (393)
T ss_dssp SCCHHHHHHHHHHSCC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCC---------CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHH
Confidence 5566655544433321 12357999999999987666543322
Q ss_pred ---------CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 140 ---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 140 ---------~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+|+|+|+|+.|++.|++|++.++ +.++|+++..|.
T Consensus 255 ~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~g-l~~~I~~~~~D~ 299 (393)
T 3k0b_A 255 EDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG-LGDLITFRQLQV 299 (393)
T ss_dssp HHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTT-CTTCSEEEECCG
T ss_pred HHhhcccCCceEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 469999999999999999999995 888899998874
No 61
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.24 E-value=6.1e-11 Score=114.99 Aligned_cols=60 Identities=18% Similarity=0.167 Sum_probs=52.2
Q ss_pred CCeEEEECCchhHHHHHHH-HhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLG-ASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La-~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++ ...++.+++|+|+|+.+++.|++|+..++ +.++|+++.+|.
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 179 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDA 179 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECch
Confidence 4689999999999877775 45678999999999999999999999885 788899998874
No 62
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.24 E-value=9.4e-11 Score=117.84 Aligned_cols=131 Identities=21% Similarity=0.168 Sum_probs=95.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+||||| |+|.++..++...+..+|+|+|+|+.+++.|++|++.++ +. +|+++.+|....
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~---------------- 233 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKP---------------- 233 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSC----------------
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhh----------------
Confidence 45899999 999998888766556799999999999999999999985 76 799998874310
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+.. ...+.||+|++||||...
T Consensus 234 ------------------------------------l~~--~~~~~fD~Vi~~~p~~~~--------------------- 254 (373)
T 2qm3_A 234 ------------------------------------LPD--YALHKFDTFITDPPETLE--------------------- 254 (373)
T ss_dssp ------------------------------------CCT--TTSSCBSEEEECCCSSHH---------------------
T ss_pred ------------------------------------chh--hccCCccEEEECCCCchH---------------------
Confidence 000 013579999999999741
Q ss_pred cCchHHHHHHHHHHHHHhhcCCe-E-EEEEeCCcCcH---HHHHHHHH-HcCCceEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFR-W-YTSMVGRKSNL---KFLISKLR-KVGVTIVKTTEF 330 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~-w-~tsmvgk~~~l---~~l~~~L~-~~g~~~v~~~e~ 330 (420)
| ...+++++.+.++++| + +.+......+. ..+.+.+. +.|+....+..+
T Consensus 255 --~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 255 --A----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp --H----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEEEE
T ss_pred --H----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 1 2567777888888877 4 33333324566 67778887 788765555543
No 63
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.23 E-value=3.2e-11 Score=131.30 Aligned_cols=135 Identities=19% Similarity=0.210 Sum_probs=96.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~-~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+++.++.. ...+|+++|+|+.|++.|++|++.|+ +. ++++++.+|...
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~---------------- 601 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLA---------------- 601 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHH----------------
T ss_pred CCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHH----------------
Confidence 358999999999987766542 23469999999999999999999995 76 689999887421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
++. ...++||+|+||||+|....... +..+
T Consensus 602 ------------------------------------~l~---~~~~~fD~Ii~DPP~f~~~~~~~--------~~~~--- 631 (703)
T 3v97_A 602 ------------------------------------WLR---EANEQFDLIFIDPPTFSNSKRME--------DAFD--- 631 (703)
T ss_dssp ------------------------------------HHH---HCCCCEEEEEECCCSBC---------------CCB---
T ss_pred ------------------------------------HHH---hcCCCccEEEECCccccCCccch--------hHHH---
Confidence 111 12468999999999997533211 0111
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCc
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVT 323 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~ 323 (420)
....+.+++..+..+++++|++.+... ..+...-.+.|.+.|+.
T Consensus 632 ----~~~~~~~ll~~a~~~LkpgG~L~~s~~-~~~~~~~~~~l~~~g~~ 675 (703)
T 3v97_A 632 ----VQRDHLALMKDLKRLLRAGGTIMFSNN-KRGFRMDLDGLAKLGLK 675 (703)
T ss_dssp ----HHHHHHHHHHHHHHHEEEEEEEEEEEC-CTTCCCCHHHHHHTTEE
T ss_pred ----HHHHHHHHHHHHHHhcCCCcEEEEEEC-CcccccCHHHHHHcCCc
Confidence 466789999999999999999876665 32233335667777764
No 64
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.23 E-value=1.6e-10 Score=112.89 Aligned_cols=60 Identities=10% Similarity=0.122 Sum_probs=51.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||+|||+|.+++.++. ....+|+|+|+||.|++.|++|++.|+ ++++|+++++|..
T Consensus 126 g~~VlD~~aG~G~~~i~~a~-~g~~~V~avD~np~a~~~~~~N~~~N~-v~~~v~~~~~D~~ 185 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAV-YGKAKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNR 185 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHH-HTCCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTT
T ss_pred CCEEEEecCcCcHHHHHHHH-hcCCeEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEeCcHH
Confidence 45899999999998766654 455799999999999999999999995 9999999988753
No 65
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.21 E-value=1.5e-10 Score=113.44 Aligned_cols=172 Identities=11% Similarity=0.034 Sum_probs=112.0
Q ss_pred cCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHH
Q 014664 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (420)
Q Consensus 72 ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~A 151 (420)
+||..+.+.....++. +....|-+.+..+..... ..+.+|||||||+|.++..++...+..+++++|||+++
T Consensus 48 ~~g~~L~ldg~~~~~~-~de~~Y~e~l~~~~l~~~-------~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~v 119 (294)
T 3adn_A 48 AFGRVMALDGVVQTTE-RDEFIYHEMMTHVPLLAH-------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGV 119 (294)
T ss_dssp TTCCEEEETTEEEEET-TTHHHHHHHHHHHHHHHS-------TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTH
T ss_pred CcceEEEECCeEeecc-CchhHHHHHHHHHHHhcC-------CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHH
Confidence 6888899998889987 455566666654422110 13468999999999998888766566899999999999
Q ss_pred HHHHHHHHHHCC--CC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 152 LEWAEKNVKSNP--HI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (420)
Q Consensus 152 L~~A~~N~~~N~--~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
++.|++|+...+ .+ ..+++++.+|...
T Consensus 120 i~~ar~~~~~~~~~~~~~~rv~~~~~D~~~-------------------------------------------------- 149 (294)
T 3adn_A 120 VSFCRQYLPNHNAGSYDDPRFKLVIDDGVN-------------------------------------------------- 149 (294)
T ss_dssp HHHHHHHCHHHHSSCTTCTTCCEECSCSCC--------------------------------------------------
T ss_pred HHHHHHhhhhcccccccCCceEEEEChHHH--------------------------------------------------
Confidence 999999986531 02 2478888776431
Q ss_pred CCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCC--
Q 014664 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGR-- 306 (420)
Q Consensus 229 ~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk-- 306 (420)
.+. ...++||+|+||+|--. .|... -|...++++..+.++++|++.+..+.
T Consensus 150 --~l~---~~~~~fDvIi~D~~~p~-------~~~~~---------------l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 150 --FVN---QTSQTFDVIISDCTDPI-------GPGES---------------LFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp --------CCCCCEEEEEECC--------------------------------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred --HHh---hcCCCccEEEECCCCcc-------Ccchh---------------ccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 111 12468999999987311 01100 11234555667888999998776532
Q ss_pred --cCcHHHHHHHHHHcCCceEEEEE
Q 014664 307 --KSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 307 --~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
...+..+.+.+++. +..+....
T Consensus 203 ~~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3adn_A 203 LQQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp SCCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cchHHHHHHHHHHHHH-CCCeEEEE
Confidence 34467777778776 45555433
No 66
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.20 E-value=1.2e-10 Score=112.57 Aligned_cols=97 Identities=11% Similarity=-0.003 Sum_probs=56.8
Q ss_pred hCCCcccceecc---CCCCccccCCCHHHHHHHHHHHhhhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCC
Q 014664 35 LYPSFEPFVFYS---RDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTS 111 (420)
Q Consensus 35 ~yP~l~~~v~~~---~~g~~~IDf~d~~a~r~Lt~aLL~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~ 111 (420)
.-|.+..|+... ..|...+--. . -+.|||+.+| |.....+.|+.+....
T Consensus 26 ~~~~~~~~~~~~g~~~~~~~~~~i~---------g--~~~~~g~~~~----------~~~~~l~~~l~~~~~~------- 77 (281)
T 3bzb_A 26 QRSRVERYQSPAGAPLQCSVQVQTT---------Q--EHPLWTSHVW----------SGARALADTLCWQPEL------- 77 (281)
T ss_dssp ---CEEEEECCSSCC-CCEEEEECC--------------------------------CHHHHHHHHHHHCGGG-------
T ss_pred HHHHHHHHHhhccccccCCeEEEEC---------C--CCCCCCceee----------cHHHHHHHHHHhcchh-------
Confidence 346677777654 3343433221 1 2568888766 4556666666654321
Q ss_pred CCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecC-cHHHHHHHHHHHHHC
Q 014664 112 RNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM-TDVALEWAEKNVKSN 162 (420)
Q Consensus 112 ~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDI-s~~AL~~A~~N~~~N 162 (420)
....+|||||||+|++++.++.. ...+|+|+|+ |+.+++.|++|++.|
T Consensus 78 --~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N 126 (281)
T 3bzb_A 78 --IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREH 126 (281)
T ss_dssp --TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTT
T ss_pred --cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHh
Confidence 12358999999999998766653 3348999999 899999999999544
No 67
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.19 E-value=1.9e-10 Score=110.21 Aligned_cols=127 Identities=12% Similarity=0.096 Sum_probs=98.3
Q ss_pred CCeEEEECCchhHHHHHHHHh-hcCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCccc
Q 014664 116 KVKGFDIGTGANCIYPLLGAS-LLGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~-~~~~~vvavDIs~~AL~~A~~N~~~N-~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~ 193 (420)
..+|||+|||+|.+...++.. .++.+++|+|+++.+++.|++|++.+ + + ++++++..|...
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-~-~~v~~~~~d~~~--------------- 173 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-I-GNVRTSRSDIAD--------------- 173 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-C-TTEEEECSCTTT---------------
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-C-CcEEEEECchhc---------------
Confidence 458999999999998888876 46789999999999999999999887 5 3 468888766321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcc
Q 014664 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em 273 (420)
.+ +++.||+|+||+|-.
T Consensus 174 ----------------------------------------~~--~~~~fD~Vi~~~~~~--------------------- 190 (275)
T 1yb2_A 174 ----------------------------------------FI--SDQMYDAVIADIPDP--------------------- 190 (275)
T ss_dssp ----------------------------------------CC--CSCCEEEEEECCSCG---------------------
T ss_pred ----------------------------------------cC--cCCCccEEEEcCcCH---------------------
Confidence 00 235799999988711
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecC
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQ 332 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~q 332 (420)
..++++...+++++|++........+...+.+.|++.|+..+++.+...
T Consensus 191 ----------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 239 (275)
T 1yb2_A 191 ----------WNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVELMK 239 (275)
T ss_dssp ----------GGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEEEEE
T ss_pred ----------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEEEec
Confidence 0455566777888898877776566788899999999998888877553
No 68
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.19 E-value=1.2e-10 Score=118.64 Aligned_cols=131 Identities=15% Similarity=0.153 Sum_probs=88.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.+++.++.. +..|+|+|+|+.|++.|++|++.|+ +..+ +...|..+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng-~~~~--~~~~D~~~----------------- 272 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLG-LRVD--IRHGEALP----------------- 272 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-CCCE--EEESCHHH-----------------
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhC-CCCc--EEEccHHH-----------------
Confidence 458999999999998777654 5679999999999999999999995 7643 44554210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
++... .+ .||+|+||||+|....... .
T Consensus 273 -----------------------------------~l~~~--~~-~fD~Ii~dpP~f~~~~~~~----------~----- 299 (393)
T 4dmg_A 273 -----------------------------------TLRGL--EG-PFHHVLLDPPTLVKRPEEL----------P----- 299 (393)
T ss_dssp -----------------------------------HHHTC--CC-CEEEEEECCCCCCSSGGGH----------H-----
T ss_pred -----------------------------------HHHHh--cC-CCCEEEECCCcCCCCHHHH----------H-----
Confidence 11111 12 3999999999986432210 0
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEE-EEeCCcCcHHHHH----HHHHHcCCc
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYT-SMVGRKSNLKFLI----SKLRKVGVT 323 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~t-smvgk~~~l~~l~----~~L~~~g~~ 323 (420)
.....+.+++..+..+++++|++. +........+.+. +.+.+.|..
T Consensus 300 --~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 300 --AMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp --HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCe
Confidence 135567889999999999999875 4444343444433 444455543
No 69
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.19 E-value=2.8e-11 Score=121.77 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=89.7
Q ss_pred CeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
.+|||+|||+|.+...++.+. +..+++|+|||+.+++.| .+++++.+|...
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~----------------- 92 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLL----------------- 92 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGG-----------------
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhh-----------------
Confidence 489999999999988887765 568999999999999877 257888776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCccccc------------CCCC
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAG------------LNPK 263 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~------------~eP~ 263 (420)
. ...++||+|+|||||+....... ..+.
T Consensus 93 --------------------------------------~--~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~ 132 (421)
T 2ih2_A 93 --------------------------------------W--EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKA 132 (421)
T ss_dssp --------------------------------------C--CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHH
T ss_pred --------------------------------------c--CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHh
Confidence 0 01358999999999987543110 0000
Q ss_pred cccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc----CcHHHHHHHHHHcCC
Q 014664 264 TSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGV 322 (420)
Q Consensus 264 ~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~----~~l~~l~~~L~~~g~ 322 (420)
... .+|....+..+++.+..+++++|++...+... .+.+.+.+.|.+.+.
T Consensus 133 ~~~---------~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 133 FST---------WKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGK 186 (421)
T ss_dssp CTT---------CCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHHSE
T ss_pred hhc---------ccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhcCC
Confidence 011 11223355677778888899999887776532 256788888888776
No 70
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.19 E-value=5.5e-10 Score=102.96 Aligned_cols=58 Identities=21% Similarity=0.291 Sum_probs=50.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+.+|||||||+|.....++...++.+++|+|+|+.+++.|++++..++ +++++.+|.
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~ 101 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL----KVKYIEADY 101 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT----TEEEEESCT
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC----CEEEEeCch
Confidence 3469999999999998888888889999999999999999999987552 789988874
No 71
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.19 E-value=1.5e-10 Score=116.67 Aligned_cols=134 Identities=15% Similarity=0.177 Sum_probs=92.6
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (420)
.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++|++.|+ +.+ ++++.+|...
T Consensus 211 ~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~-~~~-~~~~~~d~~~------------------ 268 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNG-LGN-VRVLEANAFD------------------ 268 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTT-CTT-EEEEESCHHH------------------
T ss_pred CeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-CCC-ceEEECCHHH------------------
Confidence 58999999999998888765 5789999999999999999999995 765 8998876321
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccccc
Q 014664 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~ 276 (420)
++......+++||+|+||||++...... . .
T Consensus 269 ----------------------------------~~~~~~~~~~~fD~Ii~dpP~~~~~~~~------~----~------ 298 (382)
T 1wxx_A 269 ----------------------------------LLRRLEKEGERFDLVVLDPPAFAKGKKD------V----E------ 298 (382)
T ss_dssp ----------------------------------HHHHHHHTTCCEEEEEECCCCSCCSTTS------H----H------
T ss_pred ----------------------------------HHHHHHhcCCCeeEEEECCCCCCCChhH------H----H------
Confidence 1111111246899999999998643211 0 0
Q ss_pred CchHHHHHHHHHHHHHhhcCCeEEEEEeCC-cCcH----HHHHHHHHHcCCc
Q 014664 277 GGERAFITRIIEDSVALKQTFRWYTSMVGR-KSNL----KFLISKLRKVGVT 323 (420)
Q Consensus 277 GGel~Fv~riI~eS~~l~~~~~w~tsmvgk-~~~l----~~l~~~L~~~g~~ 323 (420)
....-+..++.++..+++++|++.+.... .-.. +.+.+.+.+.|..
T Consensus 299 -~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 349 (382)
T 1wxx_A 299 -RAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRL 349 (382)
T ss_dssp -HHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCC
T ss_pred -HHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCe
Confidence 13455778888899999998886544332 2222 2333455566643
No 72
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.16 E-value=2.2e-10 Score=114.41 Aligned_cols=99 Identities=10% Similarity=0.016 Sum_probs=74.5
Q ss_pred hhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 70 LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 70 ~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
..+||..+.+...+++|+ +....|-+.+..+.... . ..+.+|||||||+|++...|+...+..+++++|+|+
T Consensus 83 ~~~~g~~l~ldg~~~~~~-~de~~y~e~L~~l~l~~-~------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~ 154 (334)
T 1xj5_A 83 SATYGKVLVLDGVIQLTE-RDECAYQEMITHLPLCS-I------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK 154 (334)
T ss_dssp ESSSCEEEEETTEEEEET-TTHHHHHHHHHHHHHTT-S------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH
T ss_pred cCCCCeEEEECCEeecCc-CcchHHHHHHHHHHHhh-C------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH
Confidence 358999999999999998 44455666555543211 1 134689999999999988887765678999999999
Q ss_pred HHHHHHHHHHHHC-CCC-CCcEEEEEccC
Q 014664 150 VALEWAEKNVKSN-PHI-SELIEIRKVDN 176 (420)
Q Consensus 150 ~AL~~A~~N~~~N-~~l-~~rI~l~~~d~ 176 (420)
.+++.|++|+... .++ ..+|+++.+|.
T Consensus 155 ~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~ 183 (334)
T 1xj5_A 155 MVVDVSKQFFPDVAIGYEDPRVNLVIGDG 183 (334)
T ss_dssp HHHHHHHHHCHHHHGGGGSTTEEEEESCH
T ss_pred HHHHHHHHHHHhhccccCCCcEEEEECCH
Confidence 9999999998652 013 35799988873
No 73
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.16 E-value=1.2e-09 Score=105.08 Aligned_cols=60 Identities=8% Similarity=0.166 Sum_probs=52.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....|+.+. ++++|+|+|+|+.+++.|+++++..+ ...+|+++.+|.
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~~~v~~~~~D~ 132 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-APTPVDVIEGDI 132 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCT
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cCceEEEeeccc
Confidence 3589999999999888887664 57899999999999999999998874 778899998875
No 74
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.16 E-value=1.3e-10 Score=117.49 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=83.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|++|++.|+ +.++++++..|...
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~----------------- 278 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFE----------------- 278 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHH-----------------
T ss_pred CCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHH-----------------
Confidence 358999999999998777754 33589999999999999999999995 77689999887321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
++.......++||+|++|||++....... .
T Consensus 279 -----------------------------------~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~----------~----- 308 (396)
T 2as0_A 279 -----------------------------------EMEKLQKKGEKFDIVVLDPPAFVQHEKDL----------K----- 308 (396)
T ss_dssp -----------------------------------HHHHHHHTTCCEEEEEECCCCSCSSGGGH----------H-----
T ss_pred -----------------------------------HHHHHHhhCCCCCEEEECCCCCCCCHHHH----------H-----
Confidence 11111112468999999999986432110 0
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYT 301 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~t 301 (420)
....-+..++.++..+++++|++.
T Consensus 309 --~~~~~~~~~l~~~~~~LkpgG~lv 332 (396)
T 2as0_A 309 --AGLRAYFNVNFAGLNLVKDGGILV 332 (396)
T ss_dssp --HHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred --HHHHHHHHHHHHHHHhcCCCcEEE
Confidence 123456778888889999988653
No 75
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.15 E-value=2.2e-09 Score=97.50 Aligned_cols=139 Identities=9% Similarity=0.055 Sum_probs=96.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++.. +.+++|+|+|+.+++.|++++ + +.++..|...
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~--~------~~~~~~d~~~----------------- 96 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL--G------RPVRTMLFHQ----------------- 96 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH--T------SCCEECCGGG-----------------
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc--C------CceEEeeecc-----------------
Confidence 458999999999988777654 779999999999999999987 1 2334443210
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+. ..++||+|+|+..+..-..
T Consensus 97 ---------------------------------------~~-~~~~fD~v~~~~~l~~~~~------------------- 117 (211)
T 3e23_A 97 ---------------------------------------LD-AIDAYDAVWAHACLLHVPR------------------- 117 (211)
T ss_dssp ---------------------------------------CC-CCSCEEEEEECSCGGGSCH-------------------
T ss_pred ---------------------------------------CC-CCCcEEEEEecCchhhcCH-------------------
Confidence 01 2568999999986643210
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--------------CcHHHHHHHHHHcC-CceEEEEEe----cCCCee
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--------------SNLKFLISKLRKVG-VTIVKTTEF----VQGQTC 336 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~--------------~~l~~l~~~L~~~g-~~~v~~~e~----~qG~t~ 336 (420)
.-...++++...+++++|++...+... -+.+.+.+.|++.| +..+.+.+. ..+...
T Consensus 118 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~ 192 (211)
T 3e23_A 118 -----DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELA 192 (211)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEE
T ss_pred -----HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCc
Confidence 114566777778888888776554322 27889999999999 987776543 234446
Q ss_pred eEEEEEeec
Q 014664 337 RWGLAWSFV 345 (420)
Q Consensus 337 Rw~lAWsF~ 345 (420)
+|+.++.-.
T Consensus 193 ~wl~~~~~~ 201 (211)
T 3e23_A 193 QFLHVSVRK 201 (211)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 676554433
No 76
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.15 E-value=2.3e-10 Score=106.90 Aligned_cols=130 Identities=11% Similarity=0.104 Sum_probs=92.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++...++..|+|+|+++.+++.|++|++.++ +. +|+++.+|...
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-l~-nv~~~~~Da~~----------------- 95 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-LS-NLRVMCHDAVE----------------- 95 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-CS-SEEEECSCHHH-----------------
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-CC-cEEEEECCHHH-----------------
Confidence 458999999999999999988889999999999999999999999885 65 48988776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEEC--CCcccCcccccCCCCcccCCCCCcc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN--PPFFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcN--PPF~~s~eea~~eP~~a~~G~~~Em 273 (420)
++.... +++.||.|++| +||......... +
T Consensus 96 -----------------------------------~l~~~~-~~~~~d~v~~~~~~p~~~~~~~~rr-----~------- 127 (218)
T 3dxy_A 96 -----------------------------------VLHKMI-PDNSLRMVQLFFPDPWHKARHNKRR-----I------- 127 (218)
T ss_dssp -----------------------------------HHHHHS-CTTCEEEEEEESCCCCCSGGGGGGS-----S-------
T ss_pred -----------------------------------HHHHHc-CCCChheEEEeCCCCccchhhhhhh-----h-------
Confidence 111111 34689999999 787654321110 0
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHc
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~ 320 (420)
+ ...++++...+++++|++.+...-..-...+.+.+...
T Consensus 128 ~--------~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~ 166 (218)
T 3dxy_A 128 V--------QVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSI 166 (218)
T ss_dssp C--------SHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred h--------hHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 0 12356667778889998766554334456667777664
No 77
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=4.2e-10 Score=101.85 Aligned_cols=52 Identities=21% Similarity=0.058 Sum_probs=42.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||+|||+|.+...++.. +..+++|+|+|+.+++.|++|+. +++++.+|
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d 103 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-------GVNFMVAD 103 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-------TSEEEECC
T ss_pred CCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-------CCEEEECc
Confidence 458999999999988777654 33479999999999999999875 36777765
No 78
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.15 E-value=1.1e-09 Score=102.29 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=97.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N-~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~ 193 (420)
..+|||+|||+|.+...++... ++.+++++|+++.+++.|++|++.+ + ..+++++..|..+
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~--------------- 159 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEE--------------- 159 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGG---------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhh---------------
Confidence 4589999999999988888763 4789999999999999999999886 4 3578888776321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcc
Q 014664 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em 273 (420)
. .+ +++.||+|+||||-.
T Consensus 160 -------------------------------------~--~~--~~~~~D~v~~~~~~~--------------------- 177 (258)
T 2pwy_A 160 -------------------------------------A--EL--EEAAYDGVALDLMEP--------------------- 177 (258)
T ss_dssp -------------------------------------C--CC--CTTCEEEEEEESSCG---------------------
T ss_pred -------------------------------------c--CC--CCCCcCEEEECCcCH---------------------
Confidence 0 00 235799999988621
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
..++++...+++++|++........++..+.+.|++.|+..+++.+.
T Consensus 178 ----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 178 ----------WKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEV 224 (258)
T ss_dssp ----------GGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEE
T ss_pred ----------HHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEe
Confidence 13455566778888988777776668889999999999988887765
No 79
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.14 E-value=1.1e-09 Score=99.82 Aligned_cols=131 Identities=17% Similarity=0.230 Sum_probs=97.7
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||||||+|.+...++... +..+++|+|+|+.+++.|++++..++ +. +++++..|...
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~~~---------------- 99 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-LK-NVEVLKSEENK---------------- 99 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEECBTTB----------------
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeccccc----------------
Confidence 4589999999999988888776 67899999999999999999998874 54 69998887431
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+ ...+++||+|+|+-.+..- .+
T Consensus 100 ------------------------------------~----~~~~~~fD~v~~~~~l~~~---------------~~--- 121 (219)
T 3dh0_A 100 ------------------------------------I----PLPDNTVDFIFMAFTFHEL---------------SE--- 121 (219)
T ss_dssp ------------------------------------C----SSCSSCEEEEEEESCGGGC---------------SS---
T ss_pred ------------------------------------C----CCCCCCeeEEEeehhhhhc---------------CC---
Confidence 0 0124689999999765421 11
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEe-C-----------CcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV-G-----------RKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmv-g-----------k~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
...++++...+++++|++.... . ..-+...+.+.|++.|+..+++...
T Consensus 122 --------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 122 --------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV 181 (219)
T ss_dssp --------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred --------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee
Confidence 2456667777888888765432 1 1235789999999999988877554
No 80
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.13 E-value=6e-10 Score=101.90 Aligned_cols=78 Identities=21% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE- 167 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~- 167 (420)
|-......|+.+++... ...+|||||||+|.+...|+...+..+++|+|+|+.+++.|++++..++ +.+
T Consensus 12 ~~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~ 81 (219)
T 3jwg_A 12 NLNQQRLGTVVAVLKSV---------NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR-LPEM 81 (219)
T ss_dssp CHHHHHHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG-SCHH
T ss_pred cchHHHHHHHHHHHhhc---------CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc-cccc
Confidence 33344556666776531 2458999999999998888776666899999999999999999998774 654
Q ss_pred ---cEEEEEccC
Q 014664 168 ---LIEIRKVDN 176 (420)
Q Consensus 168 ---rI~l~~~d~ 176 (420)
+++++.+|.
T Consensus 82 ~~~~v~~~~~d~ 93 (219)
T 3jwg_A 82 QRKRISLFQSSL 93 (219)
T ss_dssp HHTTEEEEECCS
T ss_pred cCcceEEEeCcc
Confidence 799988864
No 81
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.12 E-value=1.9e-09 Score=99.14 Aligned_cols=72 Identities=15% Similarity=0.062 Sum_probs=54.9
Q ss_pred HhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEE
Q 014664 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (420)
Q Consensus 92 ~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l 171 (420)
..+..++.+++.... ....+|||||||+|.+...++.. +.+++|+|+|+.+++.|+++...++ + ++++
T Consensus 21 ~~~~~~~~~~l~~~~-------~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~-~--~~~~ 88 (246)
T 1y8c_A 21 KKWSDFIIEKCVENN-------LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQG-L--KPRL 88 (246)
T ss_dssp HHHHHHHHHHHHTTT-------CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTT-C--CCEE
T ss_pred HHHHHHHHHHHHHhC-------CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcC-C--CeEE
Confidence 445667777775421 13468999999999987766654 6799999999999999999998874 4 5777
Q ss_pred EEcc
Q 014664 172 RKVD 175 (420)
Q Consensus 172 ~~~d 175 (420)
+..|
T Consensus 89 ~~~d 92 (246)
T 1y8c_A 89 ACQD 92 (246)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 7665
No 82
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.12 E-value=2.6e-09 Score=101.82 Aligned_cols=58 Identities=14% Similarity=0.263 Sum_probs=50.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+.+|||||||+|.+...|+.. +.+++|+|+|+.+++.|+++++.++ +..+++++..|.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 126 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAA 126 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCG
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCH
Confidence 468999999999988777655 7899999999999999999999884 777899998874
No 83
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.12 E-value=5.9e-10 Score=101.96 Aligned_cols=78 Identities=13% Similarity=0.160 Sum_probs=62.2
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE- 167 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~- 167 (420)
|-....+.++.+.+... ...+|||||||+|.+...|+...+..+++|+|+|+.+++.|++++..++ +.+
T Consensus 12 ~~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~ 81 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQS---------NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLR-LPRN 81 (217)
T ss_dssp CHHHHHHHHHHHHHHHT---------TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHH
T ss_pred CHHHHHHHHHHHHHHhc---------CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcc
Confidence 44455667777777642 2458999999999998888776667899999999999999999998774 654
Q ss_pred ---cEEEEEccC
Q 014664 168 ---LIEIRKVDN 176 (420)
Q Consensus 168 ---rI~l~~~d~ 176 (420)
+++++.+|.
T Consensus 82 ~~~~v~~~~~d~ 93 (217)
T 3jwh_A 82 QWERLQLIQGAL 93 (217)
T ss_dssp HHTTEEEEECCT
T ss_pred cCcceEEEeCCc
Confidence 799988864
No 84
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.11 E-value=2.1e-09 Score=117.04 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=59.7
Q ss_pred CCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-------------------------------
Q 014664 89 PNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL------------------------------- 137 (420)
Q Consensus 89 P~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~------------------------------- 137 (420)
|-+++....+..+... .....+||.+||||.|.+..+...
T Consensus 173 pl~e~LAa~ll~~~~~---------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~e 243 (703)
T 3v97_A 173 PIKETLAAAIVMRSGW---------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAE 243 (703)
T ss_dssp SSCHHHHHHHHHHTTC---------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC---------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHH
Confidence 6677766655544432 123579999999999876665431
Q ss_pred -----------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 138 -----------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 138 -----------~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+..+++|+|+|+.|++.|++|++.++ +.+.|++...|.
T Consensus 244 a~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~ag-v~~~i~~~~~D~ 292 (703)
T 3v97_A 244 AQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAG-IGELITFEVKDV 292 (703)
T ss_dssp HHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEECCG
T ss_pred HHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 23579999999999999999999995 888899998874
No 85
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.11 E-value=4.1e-11 Score=125.12 Aligned_cols=92 Identities=14% Similarity=0.044 Sum_probs=70.6
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
++|+..+. .++.|+|+ +.+..|..+|.+.+.. ....+|||||||+|.++..++. .+..+|+|+|+|+
T Consensus 125 ~~y~~~~~-~~~~L~d~-~~t~~~~~~il~~l~~---------~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~- 191 (480)
T 3b3j_A 125 QFYGYLSQ-QQNMMQDY-VRTGTYQRAILQNHTD---------FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST- 191 (480)
T ss_dssp EGGGCSCH-HHHHHHHH-HHHHHHHHHHHHTGGG---------TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-
T ss_pred HHHhhhcc-chhhhcCh-HhHHHHHHHHHHhhhh---------cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-
Confidence 45555544 66788887 4456666666655532 1245899999999999876664 5667999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+++.|++|++.|+ +.++|+++.+|.
T Consensus 192 ~l~~A~~~~~~~g-l~~~v~~~~~d~ 216 (480)
T 3b3j_A 192 MAQHAEVLVKSNN-LTDRIVVIPGKV 216 (480)
T ss_dssp HHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred HHHHHHHHHHHcC-CCCcEEEEECch
Confidence 9999999999995 888999998875
No 86
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.11 E-value=4.6e-09 Score=98.97 Aligned_cols=59 Identities=12% Similarity=0.147 Sum_probs=51.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++... +.+++|+|+|+.+++.|++++..++ +.++++++..|.
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 120 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAG-LANRVTFSYADA 120 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECcc
Confidence 4589999999999887777654 7899999999999999999999885 778899998874
No 87
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.11 E-value=8.5e-10 Score=108.62 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=97.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+...+ ..+|+|+|+|+.+++.|++|+++++ +. +|+++..|...
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~---------------- 180 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-VL-NVILFHSSSLH---------------- 180 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-CC-SEEEESSCGGG----------------
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-CC-eEEEEECChhh----------------
Confidence 45899999999999888887765 4799999999999999999999985 64 58887665321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+.. ..+.||.|+||||+.....- ...|.....-...+ +
T Consensus 181 -------------------------------------~~~---~~~~fD~Il~d~Pcsg~g~~-~~~p~~~~~~~~~~-~ 218 (315)
T 1ixk_A 181 -------------------------------------IGE---LNVEFDKILLDAPCTGSGTI-HKNPERKWNRTMDD-I 218 (315)
T ss_dssp -------------------------------------GGG---GCCCEEEEEEECCTTSTTTC-C--------CCHHH-H
T ss_pred -------------------------------------ccc---ccccCCEEEEeCCCCCcccc-cCChhHhhcCCHHH-H
Confidence 000 13579999999998543211 12232211111110 0
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEE---EeCCcCcHHHHHHHHHHcCCc
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVGVT 323 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~ts---mvgk~~~l~~l~~~L~~~g~~ 323 (420)
. .-.....++++++..+++++|.+.. -++..++-..+...|++.++.
T Consensus 219 ~--~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 219 K--FCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp H--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred H--HHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 0 0134457889999999888887643 355567777777888887754
No 88
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.10 E-value=1.2e-09 Score=99.72 Aligned_cols=58 Identities=26% Similarity=0.355 Sum_probs=48.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l----~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +.+++|+|+|+.+++.|++++..++ + ..+++++..|.
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~ 92 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENA 92 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecc
Confidence 458999999999988777665 7899999999999999999998764 4 23578887764
No 89
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.10 E-value=2.6e-09 Score=97.47 Aligned_cols=56 Identities=23% Similarity=0.230 Sum_probs=47.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...+ +++|+|+|+.+++.|+++.+.++ .+++++..|.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 94 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDA 94 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCT
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC---CCceEEECch
Confidence 45899999999998877766543 99999999999999999998873 5688888774
No 90
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.09 E-value=6.6e-10 Score=115.76 Aligned_cols=144 Identities=10% Similarity=0.033 Sum_probs=100.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+...|+...++ .+|+|+|+|+.+++.|++|+++++ +. |.++..|...
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~~--v~~~~~Da~~---------------- 162 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-AP--LAVTQAPPRA---------------- 162 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-CC--CEEECSCHHH----------------
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-Ce--EEEEECCHHH----------------
Confidence 458999999999999999887764 699999999999999999999985 65 8887665210
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+... ..+.||.|+||||+..... ....|.....-+...+.
T Consensus 163 -------------------------------------l~~~--~~~~FD~Il~D~PcSg~G~-~rr~pd~~~~~~~~~~~ 202 (464)
T 3m6w_A 163 -------------------------------------LAEA--FGTYFHRVLLDAPCSGEGM-FRKDREAARHWGPSAPK 202 (464)
T ss_dssp -------------------------------------HHHH--HCSCEEEEEEECCCCCGGG-TTTCTTSGGGCCTTHHH
T ss_pred -------------------------------------hhhh--ccccCCEEEECCCcCCccc-cccChHHhhhcCHHHHH
Confidence 1100 1368999999999964322 12344443322222110
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEE---EEeCCcCcHHHHHHHHHHcC
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~t---smvgk~~~l~~l~~~L~~~g 321 (420)
.-.....++++++..+++++|.+. +-+...++-..+...|++.+
T Consensus 203 ---~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~ 249 (464)
T 3m6w_A 203 ---RMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHP 249 (464)
T ss_dssp ---HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred ---HHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCC
Confidence 012345789999999999888753 24555677777888888763
No 91
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.09 E-value=3.9e-09 Score=101.79 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=51.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...+ .+++|+|+|+.+++.|++++..++ +.++|+++.+|.
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGW 131 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCG
T ss_pred cCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCH
Confidence 45899999999999887776654 899999999999999999999985 888899998863
No 92
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.09 E-value=7.7e-10 Score=108.13 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=107.2
Q ss_pred cCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHH
Q 014664 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (420)
Q Consensus 72 ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~A 151 (420)
.||..+.++....++. +....|-+.+..+.... . ..+.+|||||||+|+++..++...+..+++++|+|+.+
T Consensus 55 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 126 (296)
T 1inl_A 55 DLGVVFALDGITMTTE-KDEFMYHEMLAHVPMFL-H------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLV 126 (296)
T ss_dssp TTEEEEEETTEEEEET-TTHHHHHHHHHHHHHHH-S------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHH
T ss_pred CCcEEEEECCEEeecc-cchhHHHHHHhHHHHhc-C------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHH
Confidence 4788888886666665 33233544444331111 0 12468999999999998877765567899999999999
Q ss_pred HHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 152 LEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHG 228 (420)
Q Consensus 152 L~~A~~N~~~--N~~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
++.|++|+.. +. + ..+++++.+|...
T Consensus 127 ~~~a~~~~~~~~~~-~~~~~v~~~~~D~~~-------------------------------------------------- 155 (296)
T 1inl_A 127 IEAARKYLKQTSCG-FDDPRAEIVIANGAE-------------------------------------------------- 155 (296)
T ss_dssp HHHHHHHCHHHHGG-GGCTTEEEEESCHHH--------------------------------------------------
T ss_pred HHHHHHHhHhhccc-cCCCceEEEECcHHH--------------------------------------------------
Confidence 9999999864 21 3 3579998886321
Q ss_pred CCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc-
Q 014664 229 PPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK- 307 (420)
Q Consensus 229 ~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~- 307 (420)
.+. ...++||+|++|||.. . ..|... .+...++++...+++++|++....+..
T Consensus 156 --~l~---~~~~~fD~Ii~d~~~~-~-----~~~~~~---------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 209 (296)
T 1inl_A 156 --YVR---KFKNEFDVIIIDSTDP-T-----AGQGGH---------------LFTEEFYQACYDALKEDGVFSAETEDPF 209 (296)
T ss_dssp --HGG---GCSSCEEEEEEEC-------------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred --HHh---hCCCCceEEEEcCCCc-c-----cCchhh---------------hhHHHHHHHHHHhcCCCcEEEEEccCcc
Confidence 011 1235799999998742 0 011111 022355566778899999987776532
Q ss_pred ---CcHHHHHHHHHHcCCceEEEE
Q 014664 308 ---SNLKFLISKLRKVGVTIVKTT 328 (420)
Q Consensus 308 ---~~l~~l~~~L~~~g~~~v~~~ 328 (420)
..+..+.+.|++. +..+...
T Consensus 210 ~~~~~~~~~~~~l~~~-F~~v~~~ 232 (296)
T 1inl_A 210 YDIGWFKLAYRRISKV-FPITRVY 232 (296)
T ss_dssp TTHHHHHHHHHHHHHH-CSEEEEE
T ss_pred cCHHHHHHHHHHHHHH-CCceEEE
Confidence 2356677777776 4455543
No 93
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.08 E-value=9.6e-10 Score=101.78 Aligned_cols=130 Identities=18% Similarity=0.105 Sum_probs=94.0
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccccc
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDES 196 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~ 196 (420)
.+|||||||+|.+...|+. ++.+++|+|+|+.+++.|++++...+ ...+++++..|..+
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~------------------ 126 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFT------------------ 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTT------------------
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhc------------------
Confidence 4899999999988766643 57899999999999999999998763 55679998877431
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccccc
Q 014664 197 NMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCS 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~ 276 (420)
+ ...+.||+|+|+..+..-.. .+
T Consensus 127 ----------------------------------~-----~~~~~fD~v~~~~~l~~~~~-------------~~----- 149 (235)
T 3lcc_A 127 ----------------------------------W-----RPTELFDLIFDYVFFCAIEP-------------EM----- 149 (235)
T ss_dssp ----------------------------------C-----CCSSCEEEEEEESSTTTSCG-------------GG-----
T ss_pred ----------------------------------C-----CCCCCeeEEEEChhhhcCCH-------------HH-----
Confidence 0 02358999999876653210 01
Q ss_pred CchHHHHHHHHHHHHHhhcCCeEEEEEeCCc----------CcHHHHHHHHHHcCCceEEEEEe
Q 014664 277 GGERAFITRIIEDSVALKQTFRWYTSMVGRK----------SNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 277 GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~----------~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
...++++...+++++|++.+..-.. -+.+.+.+.|++.|+..+.+...
T Consensus 150 ------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 150 ------RPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp ------HHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred ------HHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 3456666777888888765432211 25689999999999987776554
No 94
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.08 E-value=2.2e-09 Score=102.92 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=57.9
Q ss_pred HhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEE
Q 014664 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (420)
Q Consensus 92 ~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~ 170 (420)
.+++.++.+.+... ..+.+|||||||+|.....++...+ +.+++|+|+|+.+++.|++++...+ . +++
T Consensus 7 ~~~~~~~~~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~--~v~ 75 (284)
T 3gu3_A 7 DDYVSFLVNTVWKI--------TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-Y--DSE 75 (284)
T ss_dssp HHHHHHHHHTTSCC--------CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-S--EEE
T ss_pred hHHHHHHHHHHhcc--------CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-C--ceE
Confidence 35666666555321 2356899999999999888887777 4899999999999999999998764 3 788
Q ss_pred EEEccC
Q 014664 171 IRKVDN 176 (420)
Q Consensus 171 l~~~d~ 176 (420)
++..|.
T Consensus 76 ~~~~d~ 81 (284)
T 3gu3_A 76 FLEGDA 81 (284)
T ss_dssp EEESCT
T ss_pred EEEcch
Confidence 888774
No 95
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.08 E-value=1.1e-09 Score=101.58 Aligned_cols=139 Identities=17% Similarity=0.216 Sum_probs=94.5
Q ss_pred CceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH
Q 014664 82 GQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (420)
Q Consensus 82 g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~ 161 (420)
...+|+ |....++..+...+.. ...+|||||||+|.+...++.. +.+++|+|+|+.+++.|++|
T Consensus 26 ~~~~~~-~~~~~l~~~~~~~~~~----------~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--- 89 (226)
T 3m33_A 26 ARVLSG-PDPELTFDLWLSRLLT----------PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN--- 89 (226)
T ss_dssp CCEESS-SCTTHHHHHHHHHHCC----------TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH---
T ss_pred ccccCC-CCHHHHHHHHHHhcCC----------CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh---
Confidence 456777 5555555444332211 2358999999999987777655 78999999999999999998
Q ss_pred CCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCC-CC
Q 014664 162 NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRD-GE 240 (420)
Q Consensus 162 N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~-~~ 240 (420)
. .+++++..|.... + + .. ++
T Consensus 90 ~----~~~~~~~~d~~~~----------------------------------------------------~-~--~~~~~ 110 (226)
T 3m33_A 90 A----PHADVYEWNGKGE----------------------------------------------------L-P--AGLGA 110 (226)
T ss_dssp C----TTSEEEECCSCSS----------------------------------------------------C-C--TTCCC
T ss_pred C----CCceEEEcchhhc----------------------------------------------------c-C--CcCCC
Confidence 2 2478888764210 0 0 02 46
Q ss_pred cEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHc
Q 014664 241 QFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKV 320 (420)
Q Consensus 241 ~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~ 320 (420)
.||+|+||+. +. .++++...+++++|++. ..+...+...+.+.|.+.
T Consensus 111 ~fD~v~~~~~-----------~~---------------------~~l~~~~~~LkpgG~l~-~~~~~~~~~~~~~~l~~~ 157 (226)
T 3m33_A 111 PFGLIVSRRG-----------PT---------------------SVILRLPELAAPDAHFL-YVGPRLNVPEVPERLAAV 157 (226)
T ss_dssp CEEEEEEESC-----------CS---------------------GGGGGHHHHEEEEEEEE-EEESSSCCTHHHHHHHHT
T ss_pred CEEEEEeCCC-----------HH---------------------HHHHHHHHHcCCCcEEE-EeCCcCCHHHHHHHHHHC
Confidence 8999999931 11 22334455677888876 445577888999999999
Q ss_pred CCceEEEE
Q 014664 321 GVTIVKTT 328 (420)
Q Consensus 321 g~~~v~~~ 328 (420)
|+..+.+.
T Consensus 158 Gf~~~~~~ 165 (226)
T 3m33_A 158 GWDIVAED 165 (226)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEE
Confidence 99766544
No 96
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.08 E-value=2.8e-09 Score=98.99 Aligned_cols=57 Identities=9% Similarity=-0.078 Sum_probs=48.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||+|||+|.+...|+... ++.+++|+|+++.+++.+.++++.+ .+++++.+|.
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~ 135 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDA 135 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCT
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEccc
Confidence 4589999999999988888776 5689999999999999999999876 3588887764
No 97
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.08 E-value=1.4e-09 Score=106.50 Aligned_cols=175 Identities=10% Similarity=0.012 Sum_probs=109.5
Q ss_pred cCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHH
Q 014664 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (420)
Q Consensus 72 ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~A 151 (420)
+||..+.+.....+.. .....|-+.+..+.... . ..+.+|||||||+|.+...++...+..+++++|+|+.+
T Consensus 60 ~~g~~l~ldg~~~~~~-~de~~y~e~l~~~~l~~-~------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 131 (304)
T 3bwc_A 60 PWGTVMALDGCIQVTD-YDEFVYHEVLGHTSLCS-H------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEV 131 (304)
T ss_dssp SCCEEEEETTEEEEET-TTHHHHHHHHHHHHHTT-S------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHH
T ss_pred ccceEEEECCeeeeec-ccchHHHHHHhhhhhhc-C------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHH
Confidence 5677776664444433 22233444444432211 1 13468999999999998877765556799999999999
Q ss_pred HHHHHHHHHH--CCCCCCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 152 LEWAEKNVKS--NPHISELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (420)
Q Consensus 152 L~~A~~N~~~--N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
++.|++++.. ......+++++.+|...
T Consensus 132 i~~a~~~~~~~~~~~~~~~v~~~~~D~~~--------------------------------------------------- 160 (304)
T 3bwc_A 132 MEQSKQHFPQISRSLADPRATVRVGDGLA--------------------------------------------------- 160 (304)
T ss_dssp HHHHHHHCHHHHGGGGCTTEEEEESCHHH---------------------------------------------------
T ss_pred HHHHHHHhHHhhcccCCCcEEEEECcHHH---------------------------------------------------
Confidence 9999998742 10123578998876321
Q ss_pred CccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--
Q 014664 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-- 307 (420)
Q Consensus 230 ~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~-- 307 (420)
++... .+++||+|+||+|+... |...+ |-..++++..+.++++|++....+..
T Consensus 161 -~~~~~--~~~~fDvIi~d~~~~~~-------~~~~l---------------~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 215 (304)
T 3bwc_A 161 -FVRQT--PDNTYDVVIIDTTDPAG-------PASKL---------------FGEAFYKDVLRILKPDGICCNQGESIWL 215 (304)
T ss_dssp -HHHSS--CTTCEEEEEEECC-------------------------------CCHHHHHHHHHHEEEEEEEEEEECCTTT
T ss_pred -HHHhc--cCCceeEEEECCCCccc-------cchhh---------------hHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 01000 24689999999876321 11111 11344556677889999987766532
Q ss_pred --CcHHHHHHHHHHcCCceEEEEEe
Q 014664 308 --SNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 308 --~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
.....+.+.|++.|+..+++...
T Consensus 216 ~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 216 DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 35678889999999988777653
No 98
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.07 E-value=1.2e-09 Score=112.34 Aligned_cols=60 Identities=17% Similarity=0.040 Sum_probs=47.7
Q ss_pred CCeEEEECCchhHHHHHHHHhh-------------cCCeeEEecCcHHHHHHHHHHHHHCCCCCC-cEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVKSNPHISE-LIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-------------~~~~vvavDIs~~AL~~A~~N~~~N~~l~~-rI~l~~~d~ 176 (420)
..+|+|.|||||.+...++... ...+++|+|+++.++++|+.|+..++ +.. .+.++.+|.
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~gD~ 245 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCEDS 245 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEECCT
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeCCC
Confidence 4589999999999876666543 35689999999999999999999885 542 566777664
No 99
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.07 E-value=3e-09 Score=100.58 Aligned_cols=59 Identities=19% Similarity=0.209 Sum_probs=51.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...++.+++|+|+|+.+++.|++++..++ +. +++++..|.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~ 96 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG-IK-NVKFLQANI 96 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CcEEEEccc
Confidence 468999999999998888888778999999999999999999999874 54 688887763
No 100
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.06 E-value=2.5e-09 Score=94.45 Aligned_cols=127 Identities=15% Similarity=0.124 Sum_probs=90.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|+++.. ++.++..|...
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~-------~~~~~~~d~~~----------------- 100 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP-------EARWVVGDLSV----------------- 100 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTT-----------------
T ss_pred CCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC-------CCcEEEccccc-----------------
Confidence 458999999999988777655 6799999999999999998752 36777766421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ . .+.+.||+|+|||+.+.....
T Consensus 101 -----------------------------------~--~--~~~~~~D~i~~~~~~~~~~~~------------------ 123 (195)
T 3cgg_A 101 -----------------------------------D--Q--ISETDFDLIVSAGNVMGFLAE------------------ 123 (195)
T ss_dssp -----------------------------------S--C--CCCCCEEEEEECCCCGGGSCH------------------
T ss_pred -----------------------------------C--C--CCCCceeEEEECCcHHhhcCh------------------
Confidence 0 0 023579999999877643110
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--CcHHHHHHHHHHcCCceEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK--SNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~--~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
.-...++++...+++++|.+...++.. .....+.+.+.+.|+..+++...
T Consensus 124 -----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 124 -----DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred -----HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecc
Confidence 113456666777888888776555433 36889999999999986666544
No 101
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.06 E-value=2e-09 Score=102.25 Aligned_cols=129 Identities=13% Similarity=0.079 Sum_probs=96.9
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHC-CCCCCcEEEEEccCCCCCCcccccccCCccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSN-PHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N-~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~ 193 (420)
..+|||+|||+|.+...|+... ++.+++++|+++.+++.|++|++.+ +.+..+++++..|...
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~--------------- 164 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD--------------- 164 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG---------------
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh---------------
Confidence 3589999999999988887654 4789999999999999999999875 3245678888776321
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcc
Q 014664 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em 273 (420)
. ..+++.||+|+||+|- |.
T Consensus 165 -------------------------------------~----~~~~~~~D~v~~~~~~----------~~---------- 183 (280)
T 1i9g_A 165 -------------------------------------S----ELPDGSVDRAVLDMLA----------PW---------- 183 (280)
T ss_dssp -------------------------------------C----CCCTTCEEEEEEESSC----------GG----------
T ss_pred -------------------------------------c----CCCCCceeEEEECCcC----------HH----------
Confidence 0 0023579999998861 10
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHH-cCCceEEEEEec
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK-VGVTIVKTTEFV 331 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~-~g~~~v~~~e~~ 331 (420)
.++++...+++++|++...+...+++..+...|++ .++..+++.+..
T Consensus 184 -----------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~~~~~ 231 (280)
T 1i9g_A 184 -----------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRAWETL 231 (280)
T ss_dssp -----------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEEECCC
T ss_pred -----------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEEEEEe
Confidence 24566677788899888877767888888888888 778777776644
No 102
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.06 E-value=3.7e-09 Score=102.69 Aligned_cols=59 Identities=12% Similarity=0.199 Sum_probs=52.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.+. +.+++|+|+++.+++.|++|++.++ +.++++++.+|.
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 176 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNM 176 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECCh
Confidence 4689999999999988777654 7899999999999999999999985 888899998875
No 103
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.05 E-value=8e-10 Score=106.27 Aligned_cols=143 Identities=12% Similarity=0.021 Sum_probs=92.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+...++ .+|+|+|+|+.+++.|++|+++++ +. +++++..|...
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~---------------- 145 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG-VL-NTIIINADMRK---------------- 145 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEESCHHH----------------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC-CC-cEEEEeCChHh----------------
Confidence 358999999999998888877666 899999999999999999999985 65 78888876321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+........+.||.|+|||||.....- ..+|... .. -+
T Consensus 146 ------------------------------------~~~~~~~~~~~fD~Vl~d~Pcs~~g~~-~~~p~~~----~~-~~ 183 (274)
T 3ajd_A 146 ------------------------------------YKDYLLKNEIFFDKILLDAPCSGNIIK-DKNRNVS----EE-DI 183 (274)
T ss_dssp ------------------------------------HHHHHHHTTCCEEEEEEEECCC-----------------HH-HH
T ss_pred ------------------------------------cchhhhhccccCCEEEEcCCCCCCccc-ccCCCCC----HH-HH
Confidence 000000013579999999999753221 1223111 00 00
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEE---eCCcCcHHHHHHHHHHc
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSM---VGRKSNLKFLISKLRKV 320 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsm---vgk~~~l~~l~~~L~~~ 320 (420)
. .-.....++++.+..+++++|++... +...++-..+...|++.
T Consensus 184 ~--~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 184 K--YCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp T--GGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred H--HHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 0 01123567888888888888876432 34456766666677665
No 104
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.05 E-value=1.9e-09 Score=103.82 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=48.3
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCC--CcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS--ELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~--~rI~l~~~d~ 176 (420)
.+|||||||+|.+...|+.. +++++|+|+|+.+++.|++++..++ +. .+|+++.+|.
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~v~~~~~d~ 142 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAP-ADVRDRCTLVQGDM 142 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSC-HHHHTTEEEEECBT
T ss_pred CcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcc-cccccceEEEeCch
Confidence 38999999999988777655 6899999999999999999998763 32 5799998875
No 105
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.03 E-value=5.1e-09 Score=96.45 Aligned_cols=54 Identities=22% Similarity=0.320 Sum_probs=45.5
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+|||||||+|.+...++.. .+++|+|+|+.+++.|++++..++ .+++++..|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 88 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDM 88 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCG
T ss_pred CeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcCh
Confidence 58999999999987766654 799999999999999999998763 3588887763
No 106
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.02 E-value=1.3e-08 Score=95.46 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=47.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+... .+++|+|+|+.+++.|+++++.++ +. ++.++.+|.
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~-~~-~v~~~~~d~ 94 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNG-HQ-QVEYVQGDA 94 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC-CC-ceEEEEecH
Confidence 4589999999999877776553 499999999999999999998874 54 688888764
No 107
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.02 E-value=1.1e-08 Score=97.81 Aligned_cols=59 Identities=19% Similarity=0.234 Sum_probs=51.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....|+... +.+++|+|+++.+++.|+++++..+ +..+++++.+|.
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~ 141 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAG-LADNITVKYGSF 141 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHT-CTTTEEEEECCT
T ss_pred CCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEEcCc
Confidence 4589999999999887777654 6799999999999999999998874 777899998874
No 108
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.02 E-value=2.3e-09 Score=100.10 Aligned_cols=60 Identities=10% Similarity=0.116 Sum_probs=53.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...++.+++|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 131 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNA 131 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 458999999999998888876678999999999999999999999985 777899998874
No 109
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.02 E-value=5e-09 Score=97.60 Aligned_cols=129 Identities=13% Similarity=0.076 Sum_probs=92.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++... +.+++|+|+|+.+++.|++++..+ .+++++..|...
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~----------------- 113 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILT----------------- 113 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTT-----------------
T ss_pred CCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECcccc-----------------
Confidence 4589999999999988887765 789999999999999999887643 478998887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ . .++++||+|+|+-.+..-.
T Consensus 114 -----------------------------------~--~--~~~~~fD~v~~~~~l~~~~-------------------- 134 (266)
T 3ujc_A 114 -----------------------------------K--E--FPENNFDLIYSRDAILALS-------------------- 134 (266)
T ss_dssp -----------------------------------C--C--CCTTCEEEEEEESCGGGSC--------------------
T ss_pred -----------------------------------C--C--CCCCcEEEEeHHHHHHhcC--------------------
Confidence 0 0 1246899999987654320
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEe-C--------------------CcCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMV-G--------------------RKSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmv-g--------------------k~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
..-...++++...+++++|++.... . ...+...+.+.|++.|+..+.+..
T Consensus 135 ----~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 135 ----LENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp ----HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred ----hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 0123456666667777777664432 1 123578899999999998776654
No 110
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.01 E-value=1.4e-09 Score=113.12 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=100.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+...|+...++ .+|+|+|+|+.+++.|++|+++++ +. +|.++..|...
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~~-nv~v~~~Da~~---------------- 167 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-VS-NAIVTNHAPAE---------------- 167 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-CS-SEEEECCCHHH----------------
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-ceEEEeCCHHH----------------
Confidence 458999999999999889887764 699999999999999999999985 65 58877665210
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+... ..+.||.|+||||+..... ...+|.....-+...+
T Consensus 168 -------------------------------------l~~~--~~~~FD~Il~DaPCSg~G~-~rr~p~~~~~~~~~~~- 206 (456)
T 3m4x_A 168 -------------------------------------LVPH--FSGFFDRIVVDAPCSGEGM-FRKDPNAIKEWTEESP- 206 (456)
T ss_dssp -------------------------------------HHHH--HTTCEEEEEEECCCCCGGG-TTTCHHHHHHCCTTHH-
T ss_pred -------------------------------------hhhh--ccccCCEEEECCCCCCccc-cccCHHHhhhcCHHHH-
Confidence 1110 1368999999999854322 1123332221112100
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEE---EEeCCcCcHHHHHHHHHHcCC
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYT---SMVGRKSNLKFLISKLRKVGV 322 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~t---smvgk~~~l~~l~~~L~~~g~ 322 (420)
. .-....+++++++..+++++|.+. +-+...++-..+...|++.++
T Consensus 207 ~--~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~ 255 (456)
T 3m4x_A 207 L--YCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPV 255 (456)
T ss_dssp H--HHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSE
T ss_pred H--HHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCC
Confidence 0 012355689999999988888753 345556788888888998874
No 111
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.01 E-value=1.9e-08 Score=93.48 Aligned_cols=57 Identities=11% Similarity=-0.106 Sum_probs=48.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+...+..+|+|+|+++.+++.|++|++.+ .++.++.+|.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~ 131 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDA 131 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCT
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCC
Confidence 45899999999999888887766679999999999999999998754 4688888764
No 112
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.01 E-value=2.8e-09 Score=99.73 Aligned_cols=58 Identities=10% Similarity=-0.024 Sum_probs=52.2
Q ss_pred CeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEcc
Q 014664 117 VKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVD 175 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~-~rI~l~~~d 175 (420)
.+|||||||+|..+..++..++ +.+++++|+|+++++.|++|++.++ +. ++|+++.+|
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~~i~~~~gd 117 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-YSPSRVRFLLSR 117 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCcCcEEEEEcC
Confidence 4899999999999888888765 7899999999999999999999985 77 789999876
No 113
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=1.4e-08 Score=91.39 Aligned_cols=134 Identities=10% Similarity=0.002 Sum_probs=92.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|+++. .+++++..|...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~----------------- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-------PSVTFHHGTITD----------------- 95 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGG-----------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccc-----------------
Confidence 358999999999987777655 679999999999999999872 146777665321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ...+++||+|+|+-.+..-. ..+
T Consensus 96 ------------------------------------~---~~~~~~fD~v~~~~~l~~~~-------------~~~---- 119 (203)
T 3h2b_A 96 ------------------------------------L---SDSPKRWAGLLAWYSLIHMG-------------PGE---- 119 (203)
T ss_dssp ------------------------------------G---GGSCCCEEEEEEESSSTTCC-------------TTT----
T ss_pred ------------------------------------c---ccCCCCeEEEEehhhHhcCC-------------HHH----
Confidence 0 01246899999986544211 011
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc---------------CcHHHHHHHHHHcCCceEEEEEecCCCeeeEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRK---------------SNLKFLISKLRKVGVTIVKTTEFVQGQTCRWG 339 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~---------------~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~ 339 (420)
...++++...+++++|++....... -+.+.+.+.|++.|++.+.+... .+....++
T Consensus 120 -------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~p~~~l 190 (203)
T 3h2b_A 120 -------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD-PRFPHAYL 190 (203)
T ss_dssp -------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC-TTSSEEEE
T ss_pred -------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec-CCCcchhh
Confidence 3466677777888888775544212 35899999999999987766554 45544443
No 114
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.00 E-value=7.4e-09 Score=98.25 Aligned_cols=76 Identities=16% Similarity=0.092 Sum_probs=56.8
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
.+..|+..++....+ ....+|||||||+|.....++.. +..+++|+|+|+.+++.|++++..++ +..++.++
T Consensus 48 ~~~~~~~~~l~~~~~------~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~ 119 (298)
T 1ri5_A 48 NANNFIKACLIRLYT------KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFR 119 (298)
T ss_dssp HHHHHHHHHHHHHHC------CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEE
Confidence 445677665542111 12458999999999876666543 45599999999999999999998874 66789998
Q ss_pred EccC
Q 014664 173 KVDN 176 (420)
Q Consensus 173 ~~d~ 176 (420)
..|.
T Consensus 120 ~~d~ 123 (298)
T 1ri5_A 120 AQDS 123 (298)
T ss_dssp ESCT
T ss_pred ECCc
Confidence 8874
No 115
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.00 E-value=1e-08 Score=94.48 Aligned_cols=143 Identities=17% Similarity=0.213 Sum_probs=97.8
Q ss_pred cHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEE
Q 014664 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (420)
Q Consensus 91 R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~ 170 (420)
+...+.++...+. ...+|||||||+|.+...++.. +.+++|+|+++.+++.|+++.. ..+++
T Consensus 40 ~~~~~~~l~~~~~-----------~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-----~~~~~ 101 (242)
T 3l8d_A 40 RSTIIPFFEQYVK-----------KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE-----GPDLS 101 (242)
T ss_dssp TTTHHHHHHHHSC-----------TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC-----BTTEE
T ss_pred HHHHHHHHHHHcC-----------CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc-----cCCce
Confidence 3455666665543 2358999999999988777655 7799999999999999988752 24688
Q ss_pred EEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCC
Q 014664 171 IRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP 250 (420)
Q Consensus 171 l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPP 250 (420)
++..|..+ + ..++++||+|+|+-.
T Consensus 102 ~~~~d~~~-----------------------------------------------------~---~~~~~~fD~v~~~~~ 125 (242)
T 3l8d_A 102 FIKGDLSS-----------------------------------------------------L---PFENEQFEAIMAINS 125 (242)
T ss_dssp EEECBTTB-----------------------------------------------------C---SSCTTCEEEEEEESC
T ss_pred EEEcchhc-----------------------------------------------------C---CCCCCCccEEEEcCh
Confidence 88887431 0 012468999999866
Q ss_pred cccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEe-CC--------------------cCc
Q 014664 251 FFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV-GR--------------------KSN 309 (420)
Q Consensus 251 F~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmv-gk--------------------~~~ 309 (420)
+..- .+ ...++++...+++++|++.... +. .-+
T Consensus 126 l~~~---------------~~-----------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (242)
T 3l8d_A 126 LEWT---------------EE-----------PLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMM 179 (242)
T ss_dssp TTSS---------------SC-----------HHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCC
T ss_pred Hhhc---------------cC-----------HHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCC
Confidence 5421 11 1255666667777777765543 11 134
Q ss_pred HHHHHHHHHHcCCceEEEEEecCC
Q 014664 310 LKFLISKLRKVGVTIVKTTEFVQG 333 (420)
Q Consensus 310 l~~l~~~L~~~g~~~v~~~e~~qG 333 (420)
...+.+.|++.|++.+.+.....+
T Consensus 180 ~~~~~~~l~~~Gf~~~~~~~~~~~ 203 (242)
T 3l8d_A 180 PWEFEQLVKEQGFKVVDGIGVYKR 203 (242)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEeeccccc
Confidence 567899999999988877655443
No 116
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.00 E-value=1.5e-09 Score=99.58 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++..++ +.+++|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 125 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG-LSDKIGLRLSPA 125 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCCceEEEeCCH
Confidence 35899999999999888887776 7899999999999999999999985 888899998863
No 117
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.00 E-value=1.6e-09 Score=108.85 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=48.3
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+|||+|||+|.+++.|+. ...+|+|+|+|+.|++.|++|++.|+ + ++++++.+|.
T Consensus 215 ~~vLDl~cG~G~~~l~la~--~~~~V~gvd~~~~ai~~a~~n~~~ng-~-~~v~~~~~d~ 270 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALAR--NFDRVLATEIAKPSVAAAQYNIAANH-I-DNVQIIRMAA 270 (369)
T ss_dssp SEEEEESCTTSHHHHHHGG--GSSEEEEECCCHHHHHHHHHHHHHTT-C-CSEEEECCCS
T ss_pred CEEEEccCCCCHHHHHHHh--cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECCH
Confidence 4799999999999887764 34689999999999999999999995 7 4799988764
No 118
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.99 E-value=6e-09 Score=100.74 Aligned_cols=135 Identities=9% Similarity=0.082 Sum_probs=91.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH--CCCC-CCcEEEEEccCCCCCCcccccccCCcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVDNSESTPSIQESLTGKSV 192 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~--N~~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~ 192 (420)
+.+|||||||+|.++..++...+..+++++|||+++++.|++|... ++ + ..+++++.+|...
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~-~~~~rv~v~~~D~~~-------------- 140 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGK-LDDPRVDVQVDDGFM-------------- 140 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTT-TTSTTEEEEESCSHH--------------
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccc-cCCCceEEEECcHHH--------------
Confidence 4689999999999887776554567999999999999999999854 22 3 4589999887421
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCc
Q 014664 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~E 272 (420)
.+. ...++||+|++|+|+... |...+.
T Consensus 141 --------------------------------------~l~---~~~~~fD~Ii~d~~~~~~-------~~~~l~----- 167 (275)
T 1iy9_A 141 --------------------------------------HIA---KSENQYDVIMVDSTEPVG-------PAVNLF----- 167 (275)
T ss_dssp --------------------------------------HHH---TCCSCEEEEEESCSSCCS-------CCCCCS-----
T ss_pred --------------------------------------HHh---hCCCCeeEEEECCCCCCC-------cchhhh-----
Confidence 111 124689999999986321 111110
Q ss_pred ccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc----CcHHHHHHHHHHcCCceEEEEE
Q 014664 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 273 m~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~----~~l~~l~~~L~~~g~~~v~~~e 329 (420)
.. .++++....++++|++....+.. ..+..+.+.|++. +..+....
T Consensus 168 ------~~----~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~~~ 217 (275)
T 1iy9_A 168 ------TK----GFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPITKLYT 217 (275)
T ss_dssp ------TT----HHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ------HH----HHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCeEEEE
Confidence 12 34445667888999987776532 2356677777776 55555543
No 119
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.98 E-value=3e-09 Score=105.21 Aligned_cols=171 Identities=15% Similarity=0.053 Sum_probs=106.6
Q ss_pred cCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHH
Q 014664 72 DHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVA 151 (420)
Q Consensus 72 ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~A 151 (420)
.||..+.+.....+|+ +....|-+.+..+.... . ..+.+|||||||+|.++..++...+..+++++|||+.+
T Consensus 73 ~~g~~l~ldg~~q~~~-~de~~Y~e~l~~l~l~~-~------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~ 144 (314)
T 2b2c_A 73 TYGNVLVLDGIVQATE-RDEFSYQEMLAHLPMFA-H------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMV 144 (314)
T ss_dssp TTEEEEEETTEEEEES-SSSSHHHHHHHHHHHHH-S------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHH
T ss_pred CCCEEEEECCEeecCC-cchhHHHHHHHHHHHhh-C------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHH
Confidence 5677788877777776 33345544443332111 0 12468999999999998888766567899999999999
Q ss_pred HHHHHHHHHHCC-CC-CCcEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 152 LEWAEKNVKSNP-HI-SELIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGP 229 (420)
Q Consensus 152 L~~A~~N~~~N~-~l-~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
++.|++|+.... ++ ..+|+++.+|...
T Consensus 145 i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~--------------------------------------------------- 173 (314)
T 2b2c_A 145 IDVAKKFLPGMSCGFSHPKLDLFCGDGFE--------------------------------------------------- 173 (314)
T ss_dssp HHHHHHHCTTTSGGGGCTTEEEECSCHHH---------------------------------------------------
T ss_pred HHHHHHHHHHhccccCCCCEEEEEChHHH---------------------------------------------------
Confidence 999999986530 13 4578888776321
Q ss_pred CccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--
Q 014664 230 PVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-- 307 (420)
Q Consensus 230 ~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~-- 307 (420)
.+. ...++||+|+||+|... .| . +..+-..++++...+++++|++....|..
T Consensus 174 -~l~---~~~~~fD~Ii~d~~~~~-------~~-------~--------~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~ 227 (314)
T 2b2c_A 174 -FLK---NHKNEFDVIITDSSDPV-------GP-------A--------ESLFGQSYYELLRDALKEDGILSSQGESVWL 227 (314)
T ss_dssp -HHH---HCTTCEEEEEECCC-----------------------------------HHHHHHHHEEEEEEEEEECCCTTT
T ss_pred -HHH---hcCCCceEEEEcCCCCC-------Cc-------c--------hhhhHHHHHHHHHhhcCCCeEEEEECCCccc
Confidence 111 12468999999996210 11 0 00112456667788899999988776543
Q ss_pred --CcHHHHHHHHHHcCCceEEEE
Q 014664 308 --SNLKFLISKLRKVGVTIVKTT 328 (420)
Q Consensus 308 --~~l~~l~~~L~~~g~~~v~~~ 328 (420)
.....+.+.+++. +..+...
T Consensus 228 ~~~~~~~~~~~l~~v-F~~v~~~ 249 (314)
T 2b2c_A 228 HLPLIAHLVAFNRKI-FPAVTYA 249 (314)
T ss_dssp CHHHHHHHHHHHHHH-CSEEEEE
T ss_pred CHHHHHHHHHHHHHH-CCcceEE
Confidence 2345566666665 4445443
No 120
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.98 E-value=2.2e-09 Score=98.51 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=53.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...+ +.+++|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 119 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLA 119 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 45899999999999888888777 7899999999999999999999985 888899998873
No 121
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.98 E-value=6e-09 Score=96.90 Aligned_cols=131 Identities=10% Similarity=0.030 Sum_probs=91.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...|+... ..+++|+|+|+.+++.|++++..++ ..+++++..|...
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~----------------- 139 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQD----------------- 139 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGG-----------------
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhh-----------------
Confidence 4699999999999877666554 5699999999999999999987752 3468888776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ...+++||+|+|+-.+..-.+
T Consensus 140 -----------------------------------~----~~~~~~fD~v~~~~~l~~~~~------------------- 161 (241)
T 2ex4_A 140 -----------------------------------F----TPEPDSYDVIWIQWVIGHLTD------------------- 161 (241)
T ss_dssp -----------------------------------C----CCCSSCEEEEEEESCGGGSCH-------------------
T ss_pred -----------------------------------c----CCCCCCEEEEEEcchhhhCCH-------------------
Confidence 0 012357999999854321100
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeC-C-------------cCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVG-R-------------KSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvg-k-------------~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
.-+..++++...+++++|++..... . ..+.+.+.+.|++.|+..+++..
T Consensus 162 -----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 162 -----QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred -----HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 1135677777788888887654221 0 12688999999999998777654
No 122
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.98 E-value=1.4e-09 Score=111.85 Aligned_cols=88 Identities=20% Similarity=0.313 Sum_probs=67.8
Q ss_pred cCCcEEEecCCceeCCCC-CcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 72 DHGLNWWIPDGQLCPTVP-NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 72 ffgl~~~vp~g~LiPrvP-~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
..|+.|.++++.+...-+ .+...+.|+.+ +. ...+|||+|||+|.++..|+.. ..+|+|+|+|+.
T Consensus 258 ~~g~~f~~~~~~F~q~n~~~~e~l~~~~~~-~~-----------~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ 323 (425)
T 2jjq_A 258 LDDVDYLIHPNSFFQTNSYQAVNLVRKVSE-LV-----------EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEF 323 (425)
T ss_dssp ETTEEEEECTTSCCCSBHHHHHHHHHHHHH-HC-----------CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHH
T ss_pred ECCEEEEEccccccccCHHHHHHHHHHhhc-cC-----------CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHH
Confidence 468999999998776421 23344555554 21 2358999999999998887754 579999999999
Q ss_pred HHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 151 ALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 151 AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
|++.|++|++.|+ +. ++++.+|.
T Consensus 324 ai~~A~~n~~~ng-l~--v~~~~~d~ 346 (425)
T 2jjq_A 324 AIEMARRNVEINN-VD--AEFEVASD 346 (425)
T ss_dssp HHHHHHHHHHHHT-CC--EEEEECCT
T ss_pred HHHHHHHHHHHcC-Cc--EEEEECCh
Confidence 9999999999985 65 89988874
No 123
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.97 E-value=5.9e-09 Score=98.08 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=42.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|+++.. +++++.+|.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~ 102 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNP-------DAVLHHGDM 102 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCT-------TSEEEECCT
T ss_pred CCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCC-------CCEEEECCh
Confidence 468999999999887777654 5689999999999999998743 477887764
No 124
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.97 E-value=3.3e-09 Score=99.73 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC--------CCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--------PHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N--------~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...++++++|+|+|+.+++.|++|++.+ + + .+++++.+|.
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~-~nv~~~~~D~ 116 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-F-QNINVLRGNA 116 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-T-TTEEEEECCT
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-C-CcEEEEeccH
Confidence 46899999999999888888888889999999999999999999875 3 4 3689988874
No 125
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.97 E-value=6.4e-09 Score=97.07 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=45.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
...+|||||||+|.+...++...+ .+++|+|+|+.+++.|+++.. ..+++++..|.
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~ 99 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAI 99 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-----CTTEEEEECCG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-----cCCeEEEEcch
Confidence 346899999999988777765532 399999999999999998875 23688888763
No 126
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.97 E-value=1.5e-08 Score=94.00 Aligned_cols=129 Identities=12% Similarity=0.012 Sum_probs=91.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...|+... ..+++|+|+++.+++.|++++..+ .+++++..|...
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~----------------- 151 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMET----------------- 151 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGG-----------------
T ss_pred CCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHH-----------------
Confidence 4689999999999887777654 567999999999999999998653 468888776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ....+.||+|+|+-.+..-..
T Consensus 152 ------------------------------------~---~~~~~~fD~v~~~~~l~~~~~------------------- 173 (254)
T 1xtp_A 152 ------------------------------------A---TLPPNTYDLIVIQWTAIYLTD------------------- 173 (254)
T ss_dssp ------------------------------------C---CCCSSCEEEEEEESCGGGSCH-------------------
T ss_pred ------------------------------------C---CCCCCCeEEEEEcchhhhCCH-------------------
Confidence 0 012468999999765432100
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCC---------------cCcHHHHHHHHHHcCCceEEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGR---------------KSNLKFLISKLRKVGVTIVKTTE 329 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk---------------~~~l~~l~~~L~~~g~~~v~~~e 329 (420)
.-...++++...+++++|++...... ..+.+.+.++|++.|+..+++..
T Consensus 174 -----~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 174 -----ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp -----HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred -----HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 11456677777788888876544310 12468899999999998777654
No 127
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.97 E-value=3.2e-09 Score=102.74 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=41.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
..+|||||||+|.+...|+..++..+|+|+|||+.+++.|++|++.+
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC---
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 46899999999999988988888899999999999999999998765
No 128
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.96 E-value=6.1e-09 Score=110.39 Aligned_cols=152 Identities=13% Similarity=0.093 Sum_probs=90.7
Q ss_pred CeEEEECCchhHHHHHHHHhhc---------------CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCC
Q 014664 117 VKGFDIGTGANCIYPLLGASLL---------------GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTP 181 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~---------------~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p 181 (420)
.+|+|.|||||.+.+.++..+. ...++|+||++.++++|+.|+..++ +...|.++.+|...
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~--- 321 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFL--- 321 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTT---
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhc---
Confidence 4899999999988665543321 4689999999999999999999885 65544334443211
Q ss_pred cccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCccc---c
Q 014664 182 SIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEE---A 258 (420)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~ee---a 258 (420)
.-.....+||+|||||||...... .
T Consensus 322 ----------------------------------------------------~~~~~~~~fD~Iv~NPPf~~~~~~~~~~ 349 (544)
T 3khk_A 322 ----------------------------------------------------DDQHPDLRADFVMTNPPFNMKDWWHEKL 349 (544)
T ss_dssp ----------------------------------------------------SCSCTTCCEEEEEECCCSSCCSCCCGGG
T ss_pred ----------------------------------------------------CcccccccccEEEECCCcCCccccchhh
Confidence 000124689999999999853211 1
Q ss_pred cCCCCcccCCCCCcc---c--ccCchHHHHHHHHHHHHHhhcCCeEEEEEeCC-----c-CcHHHHHHHHHHcCCceEEE
Q 014664 259 GLNPKTSCGGTPEEM---V--CSGGERAFITRIIEDSVALKQTFRWYTSMVGR-----K-SNLKFLISKLRKVGVTIVKT 327 (420)
Q Consensus 259 ~~eP~~a~~G~~~Em---~--~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk-----~-~~l~~l~~~L~~~g~~~v~~ 327 (420)
...++..+ |...|. + ...+.+.|+..++ .+++.+|...+.+.. . .....+.+.|-+.+. ...+
T Consensus 350 ~~d~r~~~-g~~~~~~~~~~~~~~~~~~Fl~~~l----~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~-l~aI 423 (544)
T 3khk_A 350 ADDPRWTI-NTNGEKRILTPPTGNANFAWMLHML----YHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDL-VECM 423 (544)
T ss_dssp TTCGGGEE-CCC--CEECCCCTTCTHHHHHHHHH----HTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTC-EEEE
T ss_pred hhhhhhhc-CcccccccccCCCcchhHHHHHHHH----HHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCc-HhEE
Confidence 11222221 100000 1 1124567777654 466777776555431 2 345778888877664 2344
Q ss_pred EEe
Q 014664 328 TEF 330 (420)
Q Consensus 328 ~e~ 330 (420)
+.+
T Consensus 424 I~L 426 (544)
T 3khk_A 424 VAL 426 (544)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 129
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.96 E-value=7.7e-09 Score=95.40 Aligned_cols=60 Identities=7% Similarity=0.051 Sum_probs=53.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...+ +.+|+|+|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 119 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQDKVTILNGAS 119 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCCceEEEECCH
Confidence 35899999999999888887654 7899999999999999999999985 888899998873
No 130
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.96 E-value=2.8e-08 Score=94.63 Aligned_cols=58 Identities=10% Similarity=0.055 Sum_probs=49.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.+...++.+. +.+++|+|+|+.+++.|++++...+ +..+++++..|
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d 122 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAG 122 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESC
T ss_pred cCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECC
Confidence 4589999999999887777554 6699999999999999999998874 77789998776
No 131
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.96 E-value=3.8e-08 Score=90.64 Aligned_cols=57 Identities=11% Similarity=-0.015 Sum_probs=48.6
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||+|||+|.++..|+... +..+++|+|+++.+++.|++|++.+ .+++++.+|.
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~ 131 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDA 131 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCT
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccC
Confidence 3589999999999988888765 4579999999999999999999764 4689988874
No 132
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.95 E-value=6.4e-09 Score=103.40 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=49.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. ...+++|+|+++ +++.|++|++.|+ +.++|+++.+|.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~-~~~~i~~~~~d~ 122 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNK-LEDTITLIKGKI 122 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcC-CCCcEEEEEeeH
Confidence 458999999999887666654 445999999997 9999999999995 878999998874
No 133
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.95 E-value=1.3e-08 Score=98.65 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=50.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.+...++... +++++|+|+|+.+++.|++++..++ +.++++++..|
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d 148 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQG 148 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESC
T ss_pred cCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECC
Confidence 4589999999999887777655 7899999999999999999999884 77789998776
No 134
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.95 E-value=1.3e-08 Score=91.62 Aligned_cols=168 Identities=11% Similarity=0.026 Sum_probs=96.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhc--CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL--GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQ 193 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~--~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~ 193 (420)
..+|||||||+|++...|+.+.+ +.+++|+|+++.+ . . .+++++.+|.... +. . .+.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~-~~v~~~~~d~~~~-~~------~-~~~ 81 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-I-PNVYFIQGEIGKD-NM------N-NIK 81 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-C-TTCEEEECCTTTT-SS------C-CC-
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-C-CCceEEEccccch-hh------h-hhc
Confidence 35899999999999988888776 6899999999831 1 2 3578888875320 00 0 000
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc--CCCCcEEEEEECCCcccCcccccCCCCcccCCCCC
Q 014664 194 DESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV--RDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPE 271 (420)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~--~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~ 271 (420)
....++.. + .......+. -.++.||+|+||+++....... .+.
T Consensus 82 ~~~~i~~~--------------------~-----~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~----------~d~ 126 (201)
T 2plw_A 82 NINYIDNM--------------------N-----NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKI----------DDH 126 (201)
T ss_dssp -----------------------------------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHH----------HHH
T ss_pred cccccccc--------------------c-----chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcc----------cCH
Confidence 00000000 0 000000000 0245799999998654321000 000
Q ss_pred cccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCe---eeEEEEEeec
Q 014664 272 EMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT---CRWGLAWSFV 345 (420)
Q Consensus 272 Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t---~Rw~lAWsF~ 345 (420)
+ ........+++++..+++++|++...+....+...+...++. .+..+++.+...++. .+|+++--|.
T Consensus 127 ~-----~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~-~f~~v~~~~~~~~r~~s~e~y~v~~~~~ 197 (201)
T 2plw_A 127 L-----NSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKG-MFQLVHTTKPKASRNESREIYLVCKNFL 197 (201)
T ss_dssp H-----HHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHT-TEEEEEECCCC-----CCEEEEEEEEEC
T ss_pred H-----HHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHH-HHheEEEECCcccCCcCceEEEEEecCc
Confidence 0 012234567888889999999988766556778888888876 467777777777653 5677776654
No 135
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.95 E-value=7.2e-09 Score=98.80 Aligned_cols=56 Identities=16% Similarity=0.218 Sum_probs=48.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|++++..++ + +++++..|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 176 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKEN-L--NISTALYDI 176 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CEEEEECCG
T ss_pred CCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcC-C--ceEEEEecc
Confidence 468999999999988777655 6799999999999999999999985 5 788888764
No 136
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.95 E-value=1.7e-08 Score=96.14 Aligned_cols=74 Identities=20% Similarity=0.310 Sum_probs=56.6
Q ss_pred CcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCC---
Q 014664 90 NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS--- 166 (420)
Q Consensus 90 ~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~--- 166 (420)
....|..|+.+++... ...+|||||||+|..+..|+.. +.+++|+|+|+.+++.|++|+.... ..
T Consensus 41 ~~~~~~~~l~~~l~~~---------~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~ 108 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQH---------GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRR-KEPAF 108 (293)
T ss_dssp BCHHHHHHHHHHHHHT---------TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-TSHHH
T ss_pred hHHHHHHHHHHHhccc---------CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcc-ccccc
Confidence 3577888888888642 2468999999999988777655 6699999999999999999986542 21
Q ss_pred CcEEEEEcc
Q 014664 167 ELIEIRKVD 175 (420)
Q Consensus 167 ~rI~l~~~d 175 (420)
.++.+...|
T Consensus 109 ~~~~~~~~d 117 (293)
T 3thr_A 109 DKWVIEEAN 117 (293)
T ss_dssp HTCEEEECC
T ss_pred ceeeEeecC
Confidence 346666554
No 137
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.95 E-value=7.6e-09 Score=102.14 Aligned_cols=58 Identities=21% Similarity=0.243 Sum_probs=48.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.++..++.. +..+|+|+|++ .+++.|+++++.|+ +.++|+++.+|.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~ 96 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKL 96 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECch
Confidence 358999999999887666543 44599999999 59999999999995 888999998874
No 138
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.95 E-value=6.3e-09 Score=94.26 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=36.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N 158 (420)
+.+|||||||+|.+...++.. +++++|+|+|+.+++.|+++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh
Confidence 468999999999987777655 78999999999999999887
No 139
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.94 E-value=1.6e-09 Score=105.94 Aligned_cols=71 Identities=13% Similarity=0.044 Sum_probs=51.6
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+.+.+|.+.+.. ....+|||||||+|.+...|+.+ +.+|+|+|+|+.+++.|++|++.++ + .+++++
T Consensus 29 ~i~~~i~~~~~~---------~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~ 95 (299)
T 2h1r_A 29 GILDKIIYAAKI---------KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVY 95 (299)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC-
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEE
Confidence 345556666542 12358999999999988777654 5799999999999999999998774 5 568888
Q ss_pred EccC
Q 014664 173 KVDN 176 (420)
Q Consensus 173 ~~d~ 176 (420)
.+|.
T Consensus 96 ~~D~ 99 (299)
T 2h1r_A 96 EGDA 99 (299)
T ss_dssp ---C
T ss_pred ECch
Confidence 7764
No 140
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.94 E-value=6.2e-09 Score=103.77 Aligned_cols=59 Identities=19% Similarity=0.280 Sum_probs=50.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...++.. +..+|+|+|+| .+++.|+++++.++ +.++|+++.+|..
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~-~~~~v~~~~~d~~ 125 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANK-LDHVVTIIKGKVE 125 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTT-CTTTEEEEESCTT
T ss_pred CCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcC-CCCcEEEEECcHH
Confidence 358999999999987766654 55699999999 59999999999995 8888999998753
No 141
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.94 E-value=1.7e-08 Score=98.23 Aligned_cols=59 Identities=15% Similarity=0.100 Sum_probs=53.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.+.++.+++++|++ .+++.|++++..++ +.++|+++..|.
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~ 224 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSA 224 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCT
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEeccc
Confidence 469999999999998888888888999999999 99999999998874 778899998874
No 142
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.94 E-value=2.6e-09 Score=108.41 Aligned_cols=59 Identities=17% Similarity=0.011 Sum_probs=51.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC---------------CCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---------------PHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N---------------~~l~~rI~l~~~d~ 176 (420)
+.+|||+|||+|++++.++.+.++.+|+|+|+|++|++.|++|++.| + +.+ |+++++|.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g-l~~-i~v~~~Da 121 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG-EKT-IVINHDDA 121 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES-SSE-EEEEESCH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC-CCc-eEEEcCcH
Confidence 35899999999999998888777778999999999999999999998 5 544 88887763
No 143
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.94 E-value=2e-08 Score=91.34 Aligned_cols=139 Identities=17% Similarity=0.126 Sum_probs=93.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|++++..++ +++++..|..+
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~d~~~----------------- 108 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPH--CKRLTVIDVMPRAIGRACQRTKRWS----HISWAATDILQ----------------- 108 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGG--EEEEEEEESCHHHHHHHHHHTTTCS----SEEEEECCTTT-----------------
T ss_pred CCcEEEEcCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcccCC----CeEEEEcchhh-----------------
Confidence 468999999999987777654 3699999999999999999987642 68998887431
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ . ..++||+|+||..++.-.
T Consensus 109 -----------------------------------~----~-~~~~fD~v~~~~~l~~~~-------------------- 128 (216)
T 3ofk_A 109 -----------------------------------F----S-TAELFDLIVVAEVLYYLE-------------------- 128 (216)
T ss_dssp -----------------------------------C----C-CSCCEEEEEEESCGGGSS--------------------
T ss_pred -----------------------------------C----C-CCCCccEEEEccHHHhCC--------------------
Confidence 0 0 246899999997654211
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEe---------CCcCcHHHHHHHHHHcCCceEEEEEecCC-CeeeEEEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEFVQG-QTCRWGLA 341 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmv---------gk~~~l~~l~~~L~~~g~~~v~~~e~~qG-~t~Rw~lA 341 (420)
...-+.+++++...+++++|++.... ......+.+...+.+. +..+...+...+ ....|+++
T Consensus 129 ---~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~d~~l~ 200 (216)
T 3ofk_A 129 ---DMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEA-LTEVERVQCQGQSADEDCLLA 200 (216)
T ss_dssp ---SHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH-SEEEEEEEEECSSTTCEEEEE
T ss_pred ---CHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh-ccceEEEeccCCccccchhHH
Confidence 12234567777888889999876532 2234455566666543 445555554323 23556555
No 144
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.93 E-value=2.1e-08 Score=99.29 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=53.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...++++++++|+ +.+++.|++++..++ +.++|+++..|.
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 241 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDF 241 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 46999999999999988988888899999999 999999999999885 777899998874
No 145
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.93 E-value=4.1e-09 Score=107.58 Aligned_cols=60 Identities=22% Similarity=0.083 Sum_probs=52.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCc-EEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISEL-IEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~~AL~~A~~N~~~N~~l~~r-I~l~~~d~ 176 (420)
..+|||++||+|.+++.++.+..+ .+|+++|+|+.|++.|++|++.|+ ++++ ++++.+|.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da 114 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEA 114 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCH
Confidence 358999999999999888876555 589999999999999999999995 8877 99988763
No 146
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.93 E-value=1.1e-08 Score=106.88 Aligned_cols=146 Identities=11% Similarity=0.060 Sum_probs=98.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+.... ..+|+|+|+|+.+++.|++|+++++ +. +|.++..|...
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~~-nv~~~~~D~~~---------------- 179 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-IS-NVALTHFDGRV---------------- 179 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-CC-SEEEECCCSTT----------------
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-cEEEEeCCHHH----------------
Confidence 45899999999999988888765 4799999999999999999999985 64 58888766321
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+... ..+.||.|+||||+.....- ...|.....-+.. -+
T Consensus 180 -------------------------------------~~~~--~~~~fD~Il~D~PcSg~G~~-~~~pd~~~~~~~~-~~ 218 (479)
T 2frx_A 180 -------------------------------------FGAA--VPEMFDAILLDAPCSGEGVV-RKDPDALKNWSPE-SN 218 (479)
T ss_dssp -------------------------------------HHHH--STTCEEEEEEECCCCCGGGG-GTCTTSSSSCCHH-HH
T ss_pred -------------------------------------hhhh--ccccCCEEEECCCcCCcccc-cCCHHHHhhcCHh-HH
Confidence 1110 13579999999999643221 1234322111111 00
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEE---EeCCcCcHHHHHHHHHHcCC
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKVGV 322 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~ts---mvgk~~~l~~l~~~L~~~g~ 322 (420)
. +-.....++++++..+++++|.+.. -+...++-..+...|++.+-
T Consensus 219 ~--~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~ 267 (479)
T 2frx_A 219 Q--EIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPD 267 (479)
T ss_dssp H--HHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTT
T ss_pred H--HHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCC
Confidence 0 0123456789999999888887633 34556777777777887763
No 147
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.92 E-value=1e-08 Score=94.35 Aligned_cols=94 Identities=12% Similarity=0.157 Sum_probs=69.0
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-----cCCeeEEe
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-----LGWSFVGS 145 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~-----~~~~vvav 145 (420)
.+++..+.+..+..++. | ....++.+++... + ....+|||||||+|.+...++... +..+++|+
T Consensus 47 ~y~d~~~~~~~~~~~~~-p---~~~~~~~~~l~~~-~------~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~v 115 (227)
T 2pbf_A 47 PYIDTPVYISHGVTISA-P---HMHALSLKRLINV-L------KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGL 115 (227)
T ss_dssp TTSSSCEEEETTEEECC-H---HHHHHHHHHHTTT-S------CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred cCCCCccccCCCCccCC-h---HHHHHHHHHHHhh-C------CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEE
Confidence 45666788888888887 3 2344445555321 1 123589999999999888887665 35799999
Q ss_pred cCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 014664 146 DMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (420)
Q Consensus 146 DIs~~AL~~A~~N~~~N~~l----~~rI~l~~~d~ 176 (420)
|+++.+++.|++|++.++ + ..+++++..|.
T Consensus 116 D~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 149 (227)
T 2pbf_A 116 ERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNI 149 (227)
T ss_dssp ESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCG
T ss_pred eCCHHHHHHHHHHHHHcC-ccccccCCEEEEECCh
Confidence 999999999999998863 3 35788887763
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.92 E-value=7.4e-09 Score=104.27 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=49.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.++..++.. ...+|+|+|+| .+++.|+++++.|+ +.++|+++.+|.
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~ 121 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSV 121 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCG
T ss_pred CCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECch
Confidence 468999999999887766654 33499999999 99999999999995 888999998874
No 149
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.92 E-value=4.9e-09 Score=99.02 Aligned_cols=132 Identities=10% Similarity=0.101 Sum_probs=88.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH------CCCCCCcEEEEEccCCCCCCccccccc
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS------NPHISELIEIRKVDNSESTPSIQESLT 188 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~------N~~l~~rI~l~~~d~~~~~p~~~~~~~ 188 (420)
...+|||||||+|.+...|+...+++.|+|+|+++.+++.|+++++. ++ + .+|.++.+|...
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~-~-~nv~~~~~d~~~---------- 113 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGG-F-QNIACLRSNAMK---------- 113 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCC-C-TTEEEEECCTTT----------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcC-C-CeEEEEECcHHH----------
Confidence 34689999999999988888888899999999999999999999864 22 3 469998887421
Q ss_pred CCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCC--cccCcccccCCCCccc
Q 014664 189 GKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPP--FFESMEEAGLNPKTSC 266 (420)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPP--F~~s~eea~~eP~~a~ 266 (420)
.+.... +.+.||.|++|-| ++......
T Consensus 114 ------------------------------------------~l~~~~-~~~~~D~v~~~~~dp~~k~~h~k-------- 142 (235)
T 3ckk_A 114 ------------------------------------------HLPNFF-YKGQLTKMFFLFPDPHFKRTKHK-------- 142 (235)
T ss_dssp ------------------------------------------CHHHHC-CTTCEEEEEEESCC-----------------
T ss_pred ------------------------------------------hhhhhC-CCcCeeEEEEeCCCchhhhhhhh--------
Confidence 011111 2457999988743 32211000
Q ss_pred CCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcC
Q 014664 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 267 ~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g 321 (420)
. ......++++...+++++|++.+...-......+.+.|.+.+
T Consensus 143 ----r--------r~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 143 ----W--------RIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp --------------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred ----h--------hhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 0 001235667777888999988766654455566777777765
No 150
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.91 E-value=8.5e-09 Score=97.44 Aligned_cols=60 Identities=12% Similarity=0.107 Sum_probs=54.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++..++ +.+++|+|+|+.+++.|++|++.++ +.++|+++.+|.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 124 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPA 124 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 45899999999999888888777 7899999999999999999999985 888899998873
No 151
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.91 E-value=1.1e-08 Score=96.58 Aligned_cols=59 Identities=17% Similarity=0.247 Sum_probs=51.1
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHH------HHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDV------ALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~------AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.....++.+. +..+++|+|+|+. +++.|+++++.++ +..+|+++..|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~~d 109 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHFNT 109 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEECSC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEECC
Confidence 4589999999999988888775 5589999999997 9999999999874 77789998775
No 152
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.91 E-value=5.2e-09 Score=97.01 Aligned_cols=60 Identities=22% Similarity=0.169 Sum_probs=53.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...++.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 114 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDA 114 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCH
Confidence 358999999999998888888778999999999999999999999985 777899987763
No 153
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.91 E-value=3.8e-09 Score=101.62 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=54.9
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+.+.+|.+.+.. ....+|||||||+|.+...|+.+ +.+|+|+|+|+++++.|++++... .+++++
T Consensus 16 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~~~----~~v~~i 80 (255)
T 3tqs_A 16 FVLQKIVSAIHP---------QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYNQQ----KNITIY 80 (255)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHTTC----TTEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHhhC----CCcEEE
Confidence 455666666642 12458999999999998877754 479999999999999999998652 469999
Q ss_pred EccCC
Q 014664 173 KVDNS 177 (420)
Q Consensus 173 ~~d~~ 177 (420)
.+|..
T Consensus 81 ~~D~~ 85 (255)
T 3tqs_A 81 QNDAL 85 (255)
T ss_dssp ESCTT
T ss_pred EcchH
Confidence 99854
No 154
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.91 E-value=2.9e-08 Score=97.63 Aligned_cols=120 Identities=12% Similarity=0.061 Sum_probs=85.2
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHH-------CCCC---CCcEEEEEccCCCCCCccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKS-------NPHI---SELIEIRKVDNSESTPSIQ 184 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~-------N~~l---~~rI~l~~~d~~~~~p~~~ 184 (420)
..+|||+|||+|.+...++... +..+++|+|+++.+++.|++|++. |+ + ..+|+++.+|..+
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~-~~~~~~~v~~~~~d~~~------ 178 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH-VEEWPDNVDFIHKDISG------ 178 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTC-SSCCCCCEEEEESCTTC------
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccc-ccccCCceEEEECChHH------
Confidence 4589999999999988887764 458999999999999999999985 32 3 3579998887532
Q ss_pred ccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCc
Q 014664 185 ESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKT 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~ 264 (420)
.+..+ .++.||+|+||+|-. .
T Consensus 179 ----------------------------------------------~~~~~--~~~~fD~V~~~~~~~----------~- 199 (336)
T 2b25_A 179 ----------------------------------------------ATEDI--KSLTFDAVALDMLNP----------H- 199 (336)
T ss_dssp ----------------------------------------------CC---------EEEEEECSSST----------T-
T ss_pred ----------------------------------------------ccccc--CCCCeeEEEECCCCH----------H-
Confidence 00011 134799999998621 0
Q ss_pred ccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcC
Q 014664 265 SCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 265 a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g 321 (420)
.++++....++++|++.+..+...++..+.+.|++.+
T Consensus 200 --------------------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~ 236 (336)
T 2b25_A 200 --------------------VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCE 236 (336)
T ss_dssp --------------------TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred --------------------HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcC
Confidence 0345566778888888777776777778888777643
No 155
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.91 E-value=3.6e-08 Score=91.79 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=47.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. ..+++|+|+|+.+++.|++++..++ +. +++++..|.
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 78 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPY--VQECIGVDATKEMVEVASSFAQEKG-VE-NVRFQQGTA 78 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHHT-CC-SEEEEECBT
T ss_pred CCEEEEEccCcCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC-CC-CeEEEeccc
Confidence 468999999999887777654 3599999999999999999998874 53 688887764
No 156
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.90 E-value=2.2e-08 Score=96.36 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=52.8
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.....|+..+ ++.+++|+|+|+.+++.|+++++.+++...+++++..|..
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 4689999999999988888765 7899999999999999999999886224568999988753
No 157
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.90 E-value=3.8e-09 Score=97.18 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=52.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~ 130 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE-AEHKIDLRLKPA 130 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT-CTTTEEEEESCH
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCeEEEEEcCH
Confidence 35899999999998888887766 6899999999999999999999985 778899998863
No 158
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.90 E-value=2.7e-08 Score=91.55 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=43.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCC-eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~-~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +. +++|+|+|+.+++.|+++... .+++++..|.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~ 98 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD-----TGITYERADL 98 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCG
T ss_pred CCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcCh
Confidence 458999999999987777654 45 999999999999999987643 2588887763
No 159
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.90 E-value=1.5e-08 Score=104.49 Aligned_cols=148 Identities=13% Similarity=0.047 Sum_probs=98.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+...++ .+++|+|+++.+++.+++|+++++ +. +|+++..|...
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~~-~v~~~~~D~~~---------------- 321 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG-IK-IVKPLVKDARK---------------- 321 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT-CC-SEEEECSCTTC----------------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC-CC-cEEEEEcChhh----------------
Confidence 358999999999999888887776 799999999999999999999985 64 58888776421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
+...+ .++.||.|+||||+.....- ...|......+..++.
T Consensus 322 ------------------------------------~~~~~--~~~~fD~Vl~D~Pcsg~g~~-~~~pd~~~~~~~~~~~ 362 (450)
T 2yxl_A 322 ------------------------------------APEII--GEEVADKVLLDAPCTSSGTI-GKNPELRWRLREDKIN 362 (450)
T ss_dssp ------------------------------------CSSSS--CSSCEEEEEEECCCCCGGGT-TTSTTHHHHCCTTSHH
T ss_pred ------------------------------------cchhh--ccCCCCEEEEcCCCCCCeee-ccChhhhhhCCHHHHH
Confidence 00000 13579999999999654321 1233322211111000
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEE---EeCCcCcHHHHHHHHHHc-CCc
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTS---MVGRKSNLKFLISKLRKV-GVT 323 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~ts---mvgk~~~l~~l~~~L~~~-g~~ 323 (420)
+-...-..+++++..+++++|++.. .+...++-..+...|++. ++.
T Consensus 363 ---~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 363 ---EMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp ---HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred ---HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 0112236788888999888887642 344456667777788876 453
No 160
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.90 E-value=1.8e-08 Score=86.90 Aligned_cols=150 Identities=9% Similarity=-0.009 Sum_probs=96.2
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.+...++... ++.+++|+|+++ +++. .+++++..|..+.
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~--------------- 74 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDE--------------- 74 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSH---------------
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccc---------------
Confidence 4589999999999988888775 568999999998 6432 3578877764310
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc--CCCCcEEEEEECCCcccCcccccCCCCcccCCCCCc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVV--RDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~--~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~E 272 (420)
+....+. ..+++||+|+||+|+........ ++
T Consensus 75 -----------------------------------~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~----------~~- 108 (180)
T 1ej0_A 75 -----------------------------------LVMKALLERVGDSKVQVVMSDMAPNMSGTPAV----------DI- 108 (180)
T ss_dssp -----------------------------------HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH----------HH-
T ss_pred -----------------------------------hhhhhhhccCCCCceeEEEECCCccccCCCcc----------ch-
Confidence 0000000 12458999999999864321100 00
Q ss_pred ccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCC---eeeEEEEEee
Q 014664 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSF 344 (420)
Q Consensus 273 m~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~lAWsF 344 (420)
--...+...++++...+++++|++........+...+...+++. +..+.+.+...++ ...|+++-.|
T Consensus 109 ----~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 109 ----PRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTKVKVRKPDSSRARSREVYIVATGR 178 (180)
T ss_dssp ----HHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhhEEeecCCcccccCceEEEEEccC
Confidence 00123457788888888999998877665577888888888875 6666655443332 2455555443
No 161
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.90 E-value=2.2e-10 Score=110.38 Aligned_cols=58 Identities=12% Similarity=0.067 Sum_probs=50.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH-------HHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD-------VALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~-------~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||+|||+|.+++.|+.. +.+|+|+|+|+ ++++.|++|++.|+ +.++|+++.+|.
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~~d~ 148 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHFGNA 148 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEESCH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEECCH
Confidence 358999999999998887764 67999999999 99999999999884 767799998873
No 162
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.90 E-value=1e-08 Score=93.79 Aligned_cols=154 Identities=12% Similarity=0.027 Sum_probs=100.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++.+ +.+|+|+|+++.+ + + .+++++.+|..+. +.
T Consensus 26 g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~-~-~~v~~~~~D~~~~-~~------------- 76 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E-I-AGVRFIRCDIFKE-TI------------- 76 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C-C-TTCEEEECCTTSS-SH-------------
T ss_pred CCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c-C-CCeEEEEccccCH-HH-------------
Confidence 468999999999998777655 7899999999741 1 2 3688888885420 00
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC--CCCcEEEEEECCCcccCcccccCCCCcccCCCCCcc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVR--DGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEM 273 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~--~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em 273 (420)
. ..+..... ..++||+|+||+|...+.... .+
T Consensus 77 -------------------------~--------~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~-----------~d-- 110 (191)
T 3dou_A 77 -------------------------F--------DDIDRALREEGIEKVDDVVSDAMAKVSGIPS-----------RD-- 110 (191)
T ss_dssp -------------------------H--------HHHHHHHHHHTCSSEEEEEECCCCCCCSCHH-----------HH--
T ss_pred -------------------------H--------HHHHHHhhcccCCcceEEecCCCcCCCCCcc-----------cC--
Confidence 0 00000010 013899999999753321100 00
Q ss_pred cccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCC---eeeEEEEEeecCc
Q 014664 274 VCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQ---TCRWGLAWSFVPP 347 (420)
Q Consensus 274 ~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~---t~Rw~lAWsF~~~ 347 (420)
.......+..+++.+..+++++|+|.+.+-.......+...|+. .+..|++.+...++ ...+++|-.|..+
T Consensus 111 --~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~v~~~~~~~ 184 (191)
T 3dou_A 111 --HAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK-NFSSYKISKPPASRGSSSEIYIMFFGFKAE 184 (191)
T ss_dssp --HHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG-GEEEEEEECC------CCEEEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH-hcCEEEEECCCCccCCCceEEEEEeeeccc
Confidence 00124456788888999999999998877766777788888865 48888888888776 4778888888665
No 163
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.90 E-value=4.8e-09 Score=101.84 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=49.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|++++..++ +.++++++.+|.
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~D~ 86 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTP-VASKLQVLVGDV 86 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEESCT
T ss_pred CCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEEcce
Confidence 458999999999988777765 5699999999999999999998764 556899998874
No 164
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.89 E-value=3.4e-09 Score=116.40 Aligned_cols=47 Identities=13% Similarity=0.064 Sum_probs=40.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhc---CCeeEEecCcHHHHHHH--HHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL---GWSFVGSDMTDVALEWA--EKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~---~~~vvavDIs~~AL~~A--~~N~~~N 162 (420)
..+|||.|||||++.+.++.+.+ ..+++|+|||+.++++| +.|+..|
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 46899999999999887776654 35899999999999999 8888765
No 165
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.88 E-value=7e-09 Score=100.39 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=87.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC-CCC--------CCcEEEEEccCCCCCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN-PHI--------SELIEIRKVDNSESTPSIQES 186 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N-~~l--------~~rI~l~~~d~~~~~p~~~~~ 186 (420)
+.+|||||||+|.++..++.. +..+++++|+|+.+++.|++|+ .. +.+ ..+++++.+|...
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~-------- 145 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE-------- 145 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH--------
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH--------
Confidence 468999999999998877766 6679999999999999999998 32 112 3578888776310
Q ss_pred ccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCccc
Q 014664 187 LTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSC 266 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~ 266 (420)
.+. . .++||+|++|+|+... |
T Consensus 146 --------------------------------------------~l~---~-~~~fD~Ii~d~~~~~~-------~---- 166 (281)
T 1mjf_A 146 --------------------------------------------FIK---N-NRGFDVIIADSTDPVG-------P---- 166 (281)
T ss_dssp --------------------------------------------HHH---H-CCCEEEEEEECCCCC-------------
T ss_pred --------------------------------------------Hhc---c-cCCeeEEEECCCCCCC-------c----
Confidence 111 1 3579999999985211 1
Q ss_pred CCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc----CcHHHHHHHHHHcCCceEEEE
Q 014664 267 GGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK----SNLKFLISKLRKVGVTIVKTT 328 (420)
Q Consensus 267 ~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~----~~l~~l~~~L~~~g~~~v~~~ 328 (420)
.. . .+...++++....++++|++....+.. ..+..+.+.+++. +..+...
T Consensus 167 ---~~-------~-l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v~~~ 220 (281)
T 1mjf_A 167 ---AK-------V-LFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRVYYY 220 (281)
T ss_dssp --------------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEEEEE
T ss_pred ---ch-------h-hhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCceEEE
Confidence 00 0 012345556667888999987765532 2345566666665 4445543
No 166
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.87 E-value=2.8e-08 Score=92.52 Aligned_cols=73 Identities=21% Similarity=0.330 Sum_probs=56.1
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
..+.|+.+++..... ....+|||||||+|.+...|+.. +.+++|+|+|+.+++.|++++..++ + +++++
T Consensus 25 ~~~~~~~~~~~~~~~------~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~ 93 (252)
T 1wzn_A 25 AEIDFVEEIFKEDAK------REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERN-L--KIEFL 93 (252)
T ss_dssp HHHHHHHHHHHHTCS------SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-C--CCEEE
T ss_pred HHHHHHHHHHHHhcc------cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEE
Confidence 345677777764211 12468999999999988777654 7799999999999999999998874 4 58888
Q ss_pred EccC
Q 014664 173 KVDN 176 (420)
Q Consensus 173 ~~d~ 176 (420)
.+|.
T Consensus 94 ~~d~ 97 (252)
T 1wzn_A 94 QGDV 97 (252)
T ss_dssp ESCG
T ss_pred ECCh
Confidence 7763
No 167
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.87 E-value=3.4e-08 Score=87.94 Aligned_cols=57 Identities=21% Similarity=0.243 Sum_probs=48.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+.+|||||||+|.+...++.. +++++|+|+|+.+++.|++++..++ +. +++++..|.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~~~~~~~d~ 89 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIEN-LD-NLHTRVVDL 89 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHT-CT-TEEEEECCG
T ss_pred CCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCC-CC-CcEEEEcch
Confidence 358999999999988777655 7899999999999999999998874 53 588887763
No 168
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.87 E-value=5.7e-08 Score=88.06 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|++|++.++ +. +++++..|.
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~-~v~~~~~d~ 134 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLD-LH-NVSTRHGDG 134 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEESCG
T ss_pred CCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcC-CC-ceEEEECCc
Confidence 468999999999988777765 7899999999999999999999884 54 699988764
No 169
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.87 E-value=1.7e-08 Score=103.26 Aligned_cols=145 Identities=12% Similarity=0.013 Sum_probs=98.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||+|||+|.....++...++.+++|+|+++.+++.+++|+++++ + .++++..|...
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~--~~~~~~~D~~~----------------- 306 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-M--KATVKQGDGRY----------------- 306 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-C--CCEEEECCTTC-----------------
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-C--CeEEEeCchhh-----------------
Confidence 458999999999998888887777899999999999999999999985 5 37777776421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+...+ .++.||.|+||||+.....- ...|......+..++
T Consensus 307 -----------------------------------~~~~~--~~~~fD~Vl~D~Pcsg~g~~-~~~p~~~~~~~~~~~-- 346 (429)
T 1sqg_A 307 -----------------------------------PSQWC--GEQQFDRILLDAPCSATGVI-RRHPDIKWLRRDRDI-- 346 (429)
T ss_dssp -----------------------------------THHHH--TTCCEEEEEEECCCCCGGGT-TTCTTHHHHCCTTHH--
T ss_pred -----------------------------------chhhc--ccCCCCEEEEeCCCCccccc-CCCcchhhcCCHHHH--
Confidence 00001 23579999999999654321 223433221122100
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEE---eCCcCcHHHHHHHHHHcC
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSM---VGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsm---vgk~~~l~~l~~~L~~~g 321 (420)
.+-..+...+++.+..+++++|++..- +...++...+...|++.+
T Consensus 347 -~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 347 -PELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp -HHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred -HHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 011235578899888988888876432 344567777777888763
No 170
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.86 E-value=3.3e-08 Score=88.95 Aligned_cols=54 Identities=17% Similarity=0.179 Sum_probs=45.7
Q ss_pred eEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+|||||||+|.+...++.. +.+++|+|+|+.+++.|+++...++ + ++.++..|.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~--~~~~~~~d~ 85 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKG-V--KITTVQSNL 85 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHT-C--CEEEECCBT
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-C--ceEEEEcCh
Confidence 8999999999987777654 6799999999999999999998764 4 688877664
No 171
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.86 E-value=1.7e-08 Score=99.15 Aligned_cols=59 Identities=15% Similarity=0.069 Sum_probs=49.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH--CCCC-CCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHI-SELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~--N~~l-~~rI~l~~~d 175 (420)
+.+|||||||+|.+...++...+..+++++|+|+++++.|++|+.. ++ + ..+++++.+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~rv~v~~~D 157 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIG-YSSSKLTLHVGD 157 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECc
Confidence 4689999999999988777665668999999999999999999865 22 3 4579998876
No 172
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.85 E-value=6.2e-08 Score=88.77 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=48.7
Q ss_pred HHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEc
Q 014664 95 IHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKV 174 (420)
Q Consensus 95 i~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~ 174 (420)
..++.+++... ..+.+|||||||+|.....++.. +.+++|+|+|+.+++.|+++... +++++.+
T Consensus 30 ~~~~~~~l~~~--------~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~ 93 (250)
T 2p7i_A 30 HPFMVRAFTPF--------FRPGNLLELGSFKGDFTSRLQEH--FNDITCVEASEEAISHAQGRLKD------GITYIHS 93 (250)
T ss_dssp HHHHHHHHGGG--------CCSSCEEEESCTTSHHHHHHTTT--CSCEEEEESCHHHHHHHHHHSCS------CEEEEES
T ss_pred HHHHHHHHHhh--------cCCCcEEEECCCCCHHHHHHHHh--CCcEEEEeCCHHHHHHHHHhhhC------CeEEEEc
Confidence 35566666532 12357999999999887777654 45899999999999999987532 5888877
Q ss_pred cC
Q 014664 175 DN 176 (420)
Q Consensus 175 d~ 176 (420)
|.
T Consensus 94 d~ 95 (250)
T 2p7i_A 94 RF 95 (250)
T ss_dssp CG
T ss_pred cH
Confidence 63
No 173
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.85 E-value=5.9e-09 Score=102.51 Aligned_cols=56 Identities=18% Similarity=0.074 Sum_probs=47.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...|+.+ +.+|+|+|+|+++++.|++++... .+++++.+|..
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~----~~v~vi~gD~l 106 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELY----NNIEIIWGDAL 106 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHC----SSEEEEESCTT
T ss_pred cCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccC----CCeEEEECchh
Confidence 358999999999998888765 679999999999999999998743 36999998853
No 174
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.85 E-value=1.4e-08 Score=102.61 Aligned_cols=177 Identities=13% Similarity=0.095 Sum_probs=112.6
Q ss_pred hcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 71 HDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 71 ~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+||..+.+.-...+.. .. ..|-+. ++... . . ...+.+|||||||+|.++..+++. +..+++++|||+.
T Consensus 154 ~~~G~~L~LDG~~q~te-~D-~~YhE~---l~~~~-~--~--~p~pkrVL~IGgG~G~~arellk~-~~~~Vt~VEID~~ 222 (364)
T 2qfm_A 154 KQFGNILILSGDVNLAE-SD-LAYTRA---IMGSG-K--E--DYTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQM 222 (364)
T ss_dssp TTTEEEEEETTEEEEET-TC-HHHHHH---HTTTT-C--C--CCTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHH
T ss_pred CCcceEEEECCEEeeec-Cc-hHHHHH---Hhhhh-h--h--CCCCCEEEEEECChhHHHHHHHHC-CCCEEEEEECCHH
Confidence 35777777777777766 33 344432 32211 1 1 124579999999999987766654 3478999999999
Q ss_pred HHHHHHHHHHHCC--CCCC----cEEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 014664 151 ALEWAEKNVKSNP--HISE----LIEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQS 224 (420)
Q Consensus 151 AL~~A~~N~~~N~--~l~~----rI~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
+++.|++|....+ .+.+ +++++.+|...
T Consensus 223 vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~---------------------------------------------- 256 (364)
T 2qfm_A 223 VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP---------------------------------------------- 256 (364)
T ss_dssp HHHHHHHHCCC----CCSSSEETTEEEEESCHHH----------------------------------------------
T ss_pred HHHHHHHHHHHhccccccccCCCcEEEEECcHHH----------------------------------------------
Confidence 9999999975321 1332 78998887421
Q ss_pred CCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEe
Q 014664 225 SYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMV 304 (420)
Q Consensus 225 ~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmv 304 (420)
++.......++||+|+++||..+.. ..|.. + . ...|++.+.+.+...++++|++.+..
T Consensus 257 ------~L~~~~~~~~~fDvII~D~~d~P~~----~~p~~-L----~-------t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 257 ------VLKRYAKEGREFDYVINDLTAVPIS----TSPEE-D----S-------TWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp ------HHHHHHHHTCCEEEEEEECCSSCCC----CC---------C-------HHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------HHHhhhccCCCceEEEECCCCcccC----cCchh-h----h-------HHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 1211111246899999999763311 11211 1 1 57899999999999999999998877
Q ss_pred CCcCcHHHHHHHHHH---cCCceEEE
Q 014664 305 GRKSNLKFLISKLRK---VGVTIVKT 327 (420)
Q Consensus 305 gk~~~l~~l~~~L~~---~g~~~v~~ 327 (420)
+ ...+.++...+++ .-+..|..
T Consensus 315 ~-s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 315 N-CVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp E-ETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred C-CcchHHHHHHHHHHHHHhCCceEE
Confidence 6 4444555555443 23445555
No 175
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.84 E-value=1.3e-09 Score=112.01 Aligned_cols=57 Identities=16% Similarity=-0.016 Sum_probs=49.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC--CCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN--PHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N--~~l~~rI~l~~~d~ 176 (420)
..+|||+|||+|.+++.|+.. +.+|+|+|+|+.+++.|++|++.+ + + ++|+++.+|.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da 152 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDF 152 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCG
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcH
Confidence 358999999999987776643 679999999999999999999987 5 5 6799998874
No 176
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.84 E-value=1.4e-07 Score=85.12 Aligned_cols=53 Identities=13% Similarity=0.140 Sum_probs=43.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +.+++|+|+|+.+++.|++ ++ + .+++++.+|.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~-~-~~~~~~~~d~ 99 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HG-L-DNVEFRQQDL 99 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GC-C-TTEEEEECCT
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cC-C-CCeEEEeccc
Confidence 358999999999988777765 7799999999999999988 32 3 4689988874
No 177
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.84 E-value=1.1e-08 Score=99.32 Aligned_cols=93 Identities=13% Similarity=0.085 Sum_probs=64.7
Q ss_pred CCHHHHHHHHHHHh---hhcCCcEEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHH
Q 014664 56 TDFNATRELTRVLL---LHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPL 132 (420)
Q Consensus 56 ~d~~a~r~Lt~aLL---~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~ 132 (420)
.+|..+++|-+..- +..||-+|-++ .+.+..|.+.+.. ... +|||||||+|.+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~k~~GQnfL~d-----------~~i~~~Iv~~~~~---------~~~-~VLEIG~G~G~lt~~ 63 (271)
T 3fut_A 5 ASPQSVRALLERHGLFADKRFGQNFLVS-----------EAHLRRIVEAARP---------FTG-PVFEVGPGLGALTRA 63 (271)
T ss_dssp CCHHHHHHHHHHTTCCCSTTSSCCEECC-----------HHHHHHHHHHHCC---------CCS-CEEEECCTTSHHHHH
T ss_pred cCHHHHHHHHHhcCCCccccCCccccCC-----------HHHHHHHHHhcCC---------CCC-eEEEEeCchHHHHHH
Confidence 45666666544321 33455555443 2345555555542 134 899999999999888
Q ss_pred HHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 133 LGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 133 La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
|+.+ +.+|+|+|+|+++++.|++++.. .+++++.+|.
T Consensus 64 L~~~--~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~~D~ 100 (271)
T 3fut_A 64 LLEA--GAEVTAIEKDLRLRPVLEETLSG-----LPVRLVFQDA 100 (271)
T ss_dssp HHHT--TCCEEEEESCGGGHHHHHHHTTT-----SSEEEEESCG
T ss_pred HHHc--CCEEEEEECCHHHHHHHHHhcCC-----CCEEEEECCh
Confidence 8765 47899999999999999998752 3699999884
No 178
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.84 E-value=5.9e-08 Score=95.75 Aligned_cols=59 Identities=15% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.+.++++++++|+ +.+++.|++|+..++ +.++|+++..|.
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 242 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDF 242 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCC
Confidence 46899999999999988988888899999999 999999999999885 777899998874
No 179
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.84 E-value=2.8e-08 Score=105.29 Aligned_cols=147 Identities=14% Similarity=0.114 Sum_probs=92.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhh---cCCeeEEecCcHHHHHHHHHHHHHCCCCC-CcEEEEEccCCCCCCcccccccCC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHIS-ELIEIRKVDNSESTPSIQESLTGK 190 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~---~~~~vvavDIs~~AL~~A~~N~~~N~~l~-~rI~l~~~d~~~~~p~~~~~~~~~ 190 (420)
...+|+|.|||||.+...++..+ ....++|+|+++.++++|+.|+..++ +. +.+.++.+|....
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gDtL~~----------- 288 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNADTLDE----------- 288 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCTTTS-----------
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEecceecc-----------
Confidence 35699999999998866666553 25789999999999999999999885 64 4688888875320
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccc---cCCCCcccC
Q 014664 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEA---GLNPKTSCG 267 (420)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea---~~eP~~a~~ 267 (420)
++ . .....+||+||+||||....... ...|+..-.
T Consensus 289 ---------------------------------------d~-p--~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~ 326 (542)
T 3lkd_A 289 ---------------------------------------DW-P--TQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPF 326 (542)
T ss_dssp ---------------------------------------CS-C--CSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGG
T ss_pred ---------------------------------------cc-c--ccccccccEEEecCCcCCccccchhhhhhhhhhhh
Confidence 00 0 01246899999999998543211 112221111
Q ss_pred C-CCCcccccCchHHHHHHHHHHHHHhhc-CCeEEEEEeCCc-----CcHHHHHHHHHHcCC
Q 014664 268 G-TPEEMVCSGGERAFITRIIEDSVALKQ-TFRWYTSMVGRK-----SNLKFLISKLRKVGV 322 (420)
Q Consensus 268 G-~~~Em~~~GGel~Fv~riI~eS~~l~~-~~~w~tsmvgk~-----~~l~~l~~~L~~~g~ 322 (420)
| ... ...+...|+..++ .+++ .+|...+.+... .....+.+.|-+.+.
T Consensus 327 G~~~~---~s~~~~~Fl~~~l----~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 327 GKLAP---KSKADFAFLLHGY----YHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEGA 381 (542)
T ss_dssp SSCCC---TTCCHHHHHHHHH----HTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTTC
T ss_pred hhcCC---CchhhHHHHHHHH----HHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCCc
Confidence 1 000 1124677777765 4566 777665554321 124667887777654
No 180
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=8.1e-08 Score=89.36 Aligned_cols=54 Identities=26% Similarity=0.236 Sum_probs=46.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...++.+++|+|+|+.+++.|+++ . .+++++..|.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~---~----~~~~~~~~d~ 87 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR---L----PNTNFGKADL 87 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH---S----TTSEEEECCT
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C----CCcEEEECCh
Confidence 4689999999999988888888889999999999999999988 2 2477777764
No 181
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.83 E-value=1.8e-08 Score=106.53 Aligned_cols=60 Identities=15% Similarity=0.025 Sum_probs=46.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhc------------------CCeeEEecCcHHHHHHHHHHHHHCCCCCC----cEEEEE
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL------------------GWSFVGSDMTDVALEWAEKNVKSNPHISE----LIEIRK 173 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~------------------~~~vvavDIs~~AL~~A~~N~~~N~~l~~----rI~l~~ 173 (420)
..+|+|.|||||.+...++.... ...++|+|+++.++++|+.|+..++ +.. ++.++.
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~~~~~~I~~ 248 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNLDHGGAIRL 248 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBGGGTBSEEE
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCccccccCCeEe
Confidence 46899999999998766655432 2479999999999999999999874 543 256666
Q ss_pred ccC
Q 014664 174 VDN 176 (420)
Q Consensus 174 ~d~ 176 (420)
+|.
T Consensus 249 gDt 251 (541)
T 2ar0_A 249 GNT 251 (541)
T ss_dssp SCT
T ss_pred CCC
Confidence 653
No 182
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.83 E-value=2e-08 Score=99.93 Aligned_cols=155 Identities=14% Similarity=0.096 Sum_probs=101.5
Q ss_pred HhHHHHHHHHHcc---CCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCc
Q 014664 92 SNYIHWIEDLLSS---NIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISEL 168 (420)
Q Consensus 92 ~nyi~wi~dll~~---~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~r 168 (420)
..|..++...+.. .. + ..++.+|||||||+|.+...|+..+++.+++++|||+.+++.|+++...+ ...+
T Consensus 68 ~~Y~e~m~~~~~~l~~~~-p----~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~--~~~r 140 (317)
T 3gjy_A 68 FEYMRWIATGARAFIDAH-Q----DASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP--RAPR 140 (317)
T ss_dssp SHHHHHHHHHHHHHHHHH-S----CGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC--CTTT
T ss_pred hHHHHHHHHHHHhhcccC-C----CCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc--CCCc
Confidence 4577767665542 10 1 11235899999999999888887788899999999999999999998654 2468
Q ss_pred EEEEEccCCCCCCcccccccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEEC
Q 014664 169 IEIRKVDNSESTPSIQESLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICN 248 (420)
Q Consensus 169 I~l~~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcN 248 (420)
++++.+|... ++... .+++||+|+++
T Consensus 141 v~v~~~Da~~----------------------------------------------------~l~~~--~~~~fDvIi~D 166 (317)
T 3gjy_A 141 VKIRVDDARM----------------------------------------------------VAESF--TPASRDVIIRD 166 (317)
T ss_dssp EEEEESCHHH----------------------------------------------------HHHTC--CTTCEEEEEEC
T ss_pred eEEEECcHHH----------------------------------------------------HHhhc--cCCCCCEEEEC
Confidence 9999887321 11111 24689999999
Q ss_pred CCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCc---HHHHHHHHHHcCCceE
Q 014664 249 PPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSN---LKFLISKLRKVGVTIV 325 (420)
Q Consensus 249 PPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~---l~~l~~~L~~~g~~~v 325 (420)
.+.... .| ..+. ..+| +++....++.+|++..-++.... +..+.+.|++. |..+
T Consensus 167 ~~~~~~------~~--------~~L~----t~ef----l~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v 223 (317)
T 3gjy_A 167 VFAGAI------TP--------QNFT----TVEF----FEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHV 223 (317)
T ss_dssp CSTTSC------CC--------GGGS----BHHH----HHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEE
T ss_pred CCCccc------cc--------hhhh----HHHH----HHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCce
Confidence 643210 01 1011 1334 44566788899998777764333 34566677765 5566
Q ss_pred EEEEe
Q 014664 326 KTTEF 330 (420)
Q Consensus 326 ~~~e~ 330 (420)
.+..+
T Consensus 224 ~~~~~ 228 (317)
T 3gjy_A 224 AVIAD 228 (317)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66653
No 183
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.82 E-value=7.8e-08 Score=95.23 Aligned_cols=60 Identities=15% Similarity=0.107 Sum_probs=54.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...++.+.|+.+++++|+ +.+++.|+++++.++ +.++|+++..|..
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 250 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIY 250 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTT
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccc
Confidence 46899999999999999988888999999999 999999999999885 7788999988753
No 184
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.82 E-value=3.5e-09 Score=100.20 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=53.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|..+..|+...+ +.+|+++|+++++++.|++|++.++ +.++|+++.+|.
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda 121 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK-QEHKIKLRLGPA 121 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTTTEEEEESCH
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 35899999999999888887775 7899999999999999999999985 888999998873
No 185
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.82 E-value=8.7e-08 Score=91.69 Aligned_cols=45 Identities=22% Similarity=0.216 Sum_probs=37.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS 161 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~ 161 (420)
..+|||||||+|. ...++...++.+|+|+|+|+.+++.|+++++.
T Consensus 72 ~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp CSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred CCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHhh
Confidence 4689999999998 44445455678999999999999999997754
No 186
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.81 E-value=3.3e-08 Score=89.92 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=43.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.. +.+++|+|+++.+++.|++++. .+++++.+|.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~ 98 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP------KEFSITEGDF 98 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC------TTCCEESCCS
T ss_pred CCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC------CceEEEeCCh
Confidence 468999999999987777654 7899999999999999998865 2466766653
No 187
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.81 E-value=5.1e-08 Score=87.66 Aligned_cols=133 Identities=10% Similarity=0.074 Sum_probs=86.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++...+. +++|+|+|+.+++.|++++... .+++++..|...
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~----~~i~~~~~d~~~----------------- 100 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHV----PQLRWETMDVRK----------------- 100 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTC----TTCEEEECCTTS-----------------
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccC----CCcEEEEcchhc-----------------
Confidence 458999999999988777765333 8999999999999999998642 368888776421
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ . ..++.||+|+||+|+..-..... .|.. ...
T Consensus 101 -----------------------------------~--~--~~~~~fD~v~~~~~~~~~~~~~~-~~~~---~~~----- 132 (215)
T 2pxx_A 101 -----------------------------------L--D--FPSASFDVVLEKGTLDALLAGER-DPWT---VSS----- 132 (215)
T ss_dssp -----------------------------------C--C--SCSSCEEEEEEESHHHHHTTTCS-CTTS---CCH-----
T ss_pred -----------------------------------C--C--CCCCcccEEEECcchhhhccccc-cccc---ccc-----
Confidence 0 0 02467999999999853211000 0110 001
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCC
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGV 322 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~ 322 (420)
....-..+++++...+++++|++..... ..-......+...++
T Consensus 133 --~~~~~~~~~l~~~~~~LkpgG~li~~~~--~~~~~~~~~~~~~~~ 175 (215)
T 2pxx_A 133 --EGVHTVDQVLSEVSRVLVPGGRFISMTS--AAPHFRTRHYAQAYY 175 (215)
T ss_dssp --HHHHHHHHHHHHHHHHEEEEEEEEEEES--CCHHHHHHHHCCGGG
T ss_pred --chhHHHHHHHHHHHHhCcCCCEEEEEeC--CCcHHHHHHHhcccc
Confidence 1344567888888889999998755443 233333445545544
No 188
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.81 E-value=2.5e-08 Score=99.20 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=49.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++. .+..+|+|+|+|+ +++.|+++++.|+ +.++|+++.+|.
T Consensus 51 ~~~VLDiGcGtG~ls~~la~-~g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~~~~~d~ 108 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKV 108 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred cCEEEEcCCCccHHHHHHHh-CCCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEEEEEcch
Confidence 45899999999998766654 3556999999996 8899999999995 888999998874
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.80 E-value=2.5e-08 Score=94.59 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=53.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|..+..++..++ +.+++++|+|+++++.|++|++.++ +.++|+++.+|.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~~i~~~~gda 140 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG-VDHKIDFREGPA 140 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCH
Confidence 35899999999999888888776 7899999999999999999999985 878899998863
No 190
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.80 E-value=7.1e-08 Score=91.69 Aligned_cols=52 Identities=19% Similarity=0.251 Sum_probs=42.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++. ++.+++|+|+|+.+++.|+++. .++.++..|.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~ 109 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADA 109 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCT
T ss_pred CCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECCh
Confidence 45899999999998777765 7889999999999999998875 1366666653
No 191
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.79 E-value=8.3e-08 Score=94.73 Aligned_cols=146 Identities=13% Similarity=0.081 Sum_probs=90.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+.... ..+|+|+|+++.+++.+++|+++++ +. +|+++..|...
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-~~-~v~~~~~D~~~---------------- 164 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-VS-CCELAEEDFLA---------------- 164 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-CC-SEEEEECCGGG----------------
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-CC-eEEEEeCChHh----------------
Confidence 35899999999999888887754 4799999999999999999999985 64 68998877421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCC--CCCc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGG--TPEE 272 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G--~~~E 272 (420)
+... .....+||.|++|||+-....- ..+|...... +..
T Consensus 165 ------------------------------------~~~~-~~~~~~fD~Vl~D~PcSg~G~~-~r~pd~~~~~~~~~~- 205 (309)
T 2b9e_A 165 ------------------------------------VSPS-DPRYHEVHYILLDPSCSGSGMP-SRQLEEPGAGTPSPV- 205 (309)
T ss_dssp ------------------------------------SCTT-CGGGTTEEEEEECCCCCC-------------------C-
T ss_pred ------------------------------------cCcc-ccccCCCCEEEEcCCcCCCCCC-ccCCChhhhccCCHH-
Confidence 0000 0001469999999999644321 1223221100 011
Q ss_pred ccccCchHHHHHHHHHHHHHhhcCCeEEE-E--EeCCcCcHHHHHHHHHHcC
Q 014664 273 MVCSGGERAFITRIIEDSVALKQTFRWYT-S--MVGRKSNLKFLISKLRKVG 321 (420)
Q Consensus 273 m~~~GGel~Fv~riI~eS~~l~~~~~w~t-s--mvgk~~~l~~l~~~L~~~g 321 (420)
-+. +-..+-.+|++.+..+++ +|.+. + -+...++-..+...|++..
T Consensus 206 ~~~--~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~ 254 (309)
T 2b9e_A 206 RLH--ALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVRDALQQNP 254 (309)
T ss_dssp CHH--HHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHHHHHTTST
T ss_pred HHH--HHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHHHHHHhCC
Confidence 000 012345678888877765 55432 2 2455677777777787764
No 192
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.78 E-value=1.4e-08 Score=96.34 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=46.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.+ +.+++|+|+|+.+++.|++|++.. ++++++.+|.
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~v~~~~~D~ 85 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQR--CNFVTAIEIDHKLCKTTENKLVDH----DNFQVLNKDI 85 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHTTTC----CSEEEECCCG
T ss_pred CCEEEEEeCCchHHHHHHHHc--CCeEEEEECCHHHHHHHHHhhccC----CCeEEEEChH
Confidence 458999999999998887765 379999999999999999998642 3688888764
No 193
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.78 E-value=3.6e-08 Score=91.63 Aligned_cols=57 Identities=7% Similarity=-0.148 Sum_probs=46.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+. ....+++|+|+|+.+++.|+++++.++ .+++++.+|.
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~ 117 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQE-APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLW 117 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHT-SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCH
T ss_pred CCeEEEEeccCCHHHHHHHh-cCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCH
Confidence 45899999999998877743 333489999999999999999988763 4688888763
No 194
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.77 E-value=1.6e-08 Score=92.17 Aligned_cols=59 Identities=17% Similarity=0.146 Sum_probs=52.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.....++...+ +.+++++|+|+.+++.|++|++.++ +.++|+++.+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d 116 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG-LIDRVELQVGD 116 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS-GGGGEEEEESC
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCceEEEEEec
Confidence 35899999999999888887776 7899999999999999999999874 77789999886
No 195
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.77 E-value=4.2e-08 Score=91.51 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=52.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++...+ +.+++++|+++.+++.|++|++.++ +.++|+++.+|.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~ 121 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSA 121 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCH
Confidence 35899999999999888887766 6899999999999999999999885 777899998863
No 196
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.77 E-value=5.1e-07 Score=83.49 Aligned_cols=57 Identities=11% Similarity=0.006 Sum_probs=44.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+...++.+|+|+|+|+.+++.+.++++.. .++.++.+|.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~ 114 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDA 114 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCT
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCC
Confidence 35899999999998877877665569999999999988777776653 2477766553
No 197
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.77 E-value=1.1e-07 Score=86.44 Aligned_cols=84 Identities=18% Similarity=0.109 Sum_probs=60.6
Q ss_pred EEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHH
Q 014664 77 WWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWA 155 (420)
Q Consensus 77 ~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A 155 (420)
+.+..+..+.. ...+.++.+++.. ....+|||||||+|.+...++... +..+++|+|+++.+++.|
T Consensus 52 ~~~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a 118 (215)
T 2yxe_A 52 LEIGYGQTISA----IHMVGMMCELLDL---------KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKA 118 (215)
T ss_dssp EEEETTEEECC----HHHHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHH
T ss_pred ccCCCCcEeCc----HHHHHHHHHhhCC---------CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHH
Confidence 44444555443 2344555555532 124589999999999988887766 447999999999999999
Q ss_pred HHHHHHCCCCCCcEEEEEcc
Q 014664 156 EKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 156 ~~N~~~N~~l~~rI~l~~~d 175 (420)
++++..++ +. +++++..|
T Consensus 119 ~~~~~~~~-~~-~v~~~~~d 136 (215)
T 2yxe_A 119 ERTLRKLG-YD-NVIVIVGD 136 (215)
T ss_dssp HHHHHHHT-CT-TEEEEESC
T ss_pred HHHHHHcC-CC-CeEEEECC
Confidence 99998874 54 48888775
No 198
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.76 E-value=6.3e-08 Score=87.20 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=52.1
Q ss_pred cHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEE
Q 014664 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (420)
Q Consensus 91 R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~ 170 (420)
+..|-.|+..+... ....+|||+|||+|.+...++. .++.+++|+|+|+.+++.|++++..++ .++.
T Consensus 8 ~~~~~~~~~~~~~~---------~~~~~vLDiGcG~G~~~~~~~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~ 74 (209)
T 2p8j_A 8 QPQLYRFLKYCNES---------NLDKTVLDCGAGGDLPPLSIFV-EDGYKTYGIEISDLQLKKAENFSRENN---FKLN 74 (209)
T ss_dssp CTHHHHHHHHHHHS---------SSCSEEEEESCCSSSCTHHHHH-HTTCEEEEEECCHHHHHHHHHHHHHHT---CCCC
T ss_pred hhhHHHHHHHHhcc---------CCCCEEEEECCCCCHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHhcC---CceE
Confidence 44566666543322 1246899999999986433433 367899999999999999999998763 3577
Q ss_pred EEEccC
Q 014664 171 IRKVDN 176 (420)
Q Consensus 171 l~~~d~ 176 (420)
++..|.
T Consensus 75 ~~~~d~ 80 (209)
T 2p8j_A 75 ISKGDI 80 (209)
T ss_dssp EEECCT
T ss_pred EEECch
Confidence 777764
No 199
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.76 E-value=1.1e-08 Score=100.86 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=66.7
Q ss_pred CCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHH
Q 014664 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK 160 (420)
Q Consensus 81 ~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~ 160 (420)
-+.|... |--.+|+..+...+....+ ..+.+|||||||+|.+..+++++.++.+|+|+|+|+++++.|+++++
T Consensus 95 ~~~l~~f-py~~~~~~l~~~E~~la~l------~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~ 167 (298)
T 3fpf_A 95 WETLRSF-YFYPRYLELLKNEAALGRF------RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE 167 (298)
T ss_dssp HHHHHTS-TTHHHHHHHHHHHHHHTTC------CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH
T ss_pred HHhhccC-CCcccHHHHHHHHHHHcCC------CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH
Confidence 3466665 5567788877655433222 23469999999998776666667789999999999999999999999
Q ss_pred HCCCCCCcEEEEEccC
Q 014664 161 SNPHISELIEIRKVDN 176 (420)
Q Consensus 161 ~N~~l~~rI~l~~~d~ 176 (420)
..+ + ++|+++.+|.
T Consensus 168 ~~g-l-~~v~~v~gDa 181 (298)
T 3fpf_A 168 GLG-V-DGVNVITGDE 181 (298)
T ss_dssp HHT-C-CSEEEEESCG
T ss_pred hcC-C-CCeEEEECch
Confidence 875 7 7899998873
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.76 E-value=4.4e-08 Score=96.42 Aligned_cols=137 Identities=13% Similarity=0.037 Sum_probs=90.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH-CCC-C-CCcEEEEEccCCCCCCcccccccCCcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-NPH-I-SELIEIRKVDNSESTPSIQESLTGKSV 192 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~-N~~-l-~~rI~l~~~d~~~~~p~~~~~~~~~~~ 192 (420)
+.+|||||||+|.+...++...+..+++++|+|+.+++.|++++.. |.+ + ..+++++.+|...
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~-------------- 143 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA-------------- 143 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH--------------
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH--------------
Confidence 4689999999999987777655678999999999999999999864 211 2 3579998886321
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCc
Q 014664 193 QDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEE 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~E 272 (420)
.+. ...++||+|+||+|..... ..| .
T Consensus 144 --------------------------------------~l~---~~~~~fD~Ii~d~~~~~~~----~~~-------~-- 169 (314)
T 1uir_A 144 --------------------------------------YLE---RTEERYDVVIIDLTDPVGE----DNP-------A-- 169 (314)
T ss_dssp --------------------------------------HHH---HCCCCEEEEEEECCCCBST----TCG-------G--
T ss_pred --------------------------------------HHH---hcCCCccEEEECCCCcccc----cCc-------c--
Confidence 111 1246799999998753200 001 1
Q ss_pred ccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc-----CcHHHHHHHHHHcCCceEEE
Q 014664 273 MVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-----SNLKFLISKLRKVGVTIVKT 327 (420)
Q Consensus 273 m~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~-----~~l~~l~~~L~~~g~~~v~~ 327 (420)
+..+...++++..+.++++|++....+.. .....+.+.|++. +..+..
T Consensus 170 ------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v~~ 222 (314)
T 1uir_A 170 ------RLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYVRS 222 (314)
T ss_dssp ------GGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEEEE
T ss_pred ------hhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCceEE
Confidence 11123455666778889999887665432 3466777777776 444443
No 201
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.76 E-value=1.3e-08 Score=94.95 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=49.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEE
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEI 171 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l 171 (420)
+.+|||||||+|.+++.++...|+.+++|+|||+.|+++|++|++.++ +..++++
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~ 104 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF 104 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE
Confidence 468999999999999988888889999999999999999999999985 7666776
No 202
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.76 E-value=2e-08 Score=101.97 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=48.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.++ ++|++....+|+|+|.|+ +++.|+++++.|+ ++++|++++++.
T Consensus 84 ~k~VLDvG~GtGiLs-~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~-~~~~i~~i~~~~ 141 (376)
T 4hc4_A 84 GKTVLDVGAGTGILS-IFCAQAGARRVYAVEASA-IWQQAREVVRFNG-LEDRVHVLPGPV 141 (376)
T ss_dssp TCEEEEETCTTSHHH-HHHHHTTCSEEEEEECST-THHHHHHHHHHTT-CTTTEEEEESCT
T ss_pred CCEEEEeCCCccHHH-HHHHHhCCCEEEEEeChH-HHHHHHHHHHHcC-CCceEEEEeeee
Confidence 358999999999764 455554445899999996 8899999999995 999999999874
No 203
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.75 E-value=1.4e-07 Score=92.75 Aligned_cols=60 Identities=10% Similarity=0.009 Sum_probs=54.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...++.+.|+.+++++|+ +.+++.|++++...+ +.++|+++..|..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLL 239 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcc
Confidence 56999999999999988998889999999999 889999999999885 8889999988753
No 204
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.75 E-value=6.2e-08 Score=89.93 Aligned_cols=41 Identities=22% Similarity=0.375 Sum_probs=35.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N 158 (420)
..+|||||||+|.+...++.. +.+++|+|+|+.+++.|+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh
Confidence 468999999999987766654 77899999999999998766
No 205
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.75 E-value=3.5e-08 Score=93.71 Aligned_cols=65 Identities=25% Similarity=0.141 Sum_probs=43.2
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 94 yi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
.++|+.+.+...... ......+|||||||+|.... +++...-.+|+|+|+|+.|++.|+++++.+
T Consensus 37 ~~~~~~~~~~~~~~~---~~~~g~~vLDiGCG~G~~~~-~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~ 101 (263)
T 2a14_A 37 MLKFNLECLHKTFGP---GGLQGDTLIDIGSGPTIYQV-LAACDSFQDITLSDFTDRNREELEKWLKKE 101 (263)
T ss_dssp HHHHHHHHHHHHHST---TSCCEEEEEESSCTTCCGGG-TTGGGTEEEEEEEESCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcC---CCCCCceEEEeCCCccHHHH-HHHHhhhcceeeccccHHHHHHHHHHHhcC
Confidence 677886665431000 01134589999999995433 332222237999999999999999998765
No 206
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.74 E-value=1.6e-08 Score=104.13 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=49.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHH-------HCCCC-CCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK-------SNPHI-SELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~-------~N~~l-~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+.+.++...+..+++|+|+++.++++|++|++ .++ + ..+|+|+++|..
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~~ 242 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDFL 242 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECccc
Confidence 458999999999998877766544469999999999999999863 343 4 368999999864
No 207
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.74 E-value=1.4e-07 Score=87.84 Aligned_cols=56 Identities=18% Similarity=0.328 Sum_probs=46.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +.+++|+|+|+.+++.|++++ .. ...+++++..|.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~--~~~~~~~~~~d~ 95 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AG--VDRKVQVVQADA 95 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TT--SCTTEEEEESCT
T ss_pred CCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hc--cCCceEEEEccc
Confidence 468999999999987777654 689999999999999999998 32 345789888764
No 208
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.74 E-value=5.7e-08 Score=91.74 Aligned_cols=65 Identities=18% Similarity=0.046 Sum_probs=48.1
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
.+..++.+.+.. ....+|||||||+|.....++. ++.+++|+|+|+.+++.|+++. +++++
T Consensus 21 ~~~~~l~~~~~~---------~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~--------~~~~~ 81 (261)
T 3ege_A 21 RIVNAIINLLNL---------PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP--------QVEWF 81 (261)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT--------TEEEE
T ss_pred HHHHHHHHHhCC---------CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc--------CCEEE
Confidence 455556666542 1346899999999998777764 6789999999999998875443 47887
Q ss_pred EccC
Q 014664 173 KVDN 176 (420)
Q Consensus 173 ~~d~ 176 (420)
..|.
T Consensus 82 ~~d~ 85 (261)
T 3ege_A 82 TGYA 85 (261)
T ss_dssp CCCT
T ss_pred ECch
Confidence 6663
No 209
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.74 E-value=1.5e-08 Score=99.88 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=51.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..++||+|||+|.....++.+.++.+|+|+|+|+.|++.|++|++.++ ++++++++|.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~ 84 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSY 84 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCG
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCH
Confidence 358999999999999888887778899999999999999999998873 5899998874
No 210
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.73 E-value=3.7e-07 Score=91.17 Aligned_cols=59 Identities=17% Similarity=0.114 Sum_probs=53.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.+.|+.+++++|+ +.+++.|++++...+ +.++|+++..|.
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~ 261 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDF 261 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCC
Confidence 46999999999999988988889999999999 999999999999884 888999998874
No 211
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.72 E-value=4e-08 Score=90.29 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=49.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l----~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++... +..+++|+|+++.+++.|++|+..++ + .++++++..|.
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 142 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDG 142 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCG
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCc
Confidence 4589999999999888887665 44799999999999999999998763 3 34688887763
No 212
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.72 E-value=3.6e-08 Score=90.22 Aligned_cols=59 Identities=22% Similarity=0.230 Sum_probs=45.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCC----------CCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH----------ISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~----------l~~rI~l~~~d~ 176 (420)
..+|||+|||+|.....|+.+ +++|+|+|+|+.|++.|+++....+. ...+|+++.+|.
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 91 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 91 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred CCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence 458999999999887777754 78999999999999999988653100 023678887774
No 213
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.72 E-value=3.3e-07 Score=87.31 Aligned_cols=130 Identities=11% Similarity=-0.002 Sum_probs=91.9
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....|+... +.-+|+|+|+++++++.|+++++..+ +|..+..+... |.
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~----ni~~V~~d~~~--p~------------ 139 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR----NIFPILGDARF--PE------------ 139 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT----TEEEEESCTTC--GG------------
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc----CeeEEEEeccC--cc------------
Confidence 4589999999999887777664 56799999999999999999887643 57777776431 10
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
.. . ...+.+|++.|..|+...
T Consensus 140 ------------------------------------~~-~--~~~~~vDvVf~d~~~~~~-------------------- 160 (233)
T 4df3_A 140 ------------------------------------KY-R--HLVEGVDGLYADVAQPEQ-------------------- 160 (233)
T ss_dssp ------------------------------------GG-T--TTCCCEEEEEECCCCTTH--------------------
T ss_pred ------------------------------------cc-c--cccceEEEEEEeccCChh--------------------
Confidence 00 0 123679999998765420
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEe---------CCcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmv---------gk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
...++.++..+++++|.+...+ .-+..++..++.|++.|++.+++..+
T Consensus 161 --------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 161 --------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp --------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred --------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 2345667778888888875543 11233566788899999988777664
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.71 E-value=4.5e-08 Score=91.24 Aligned_cols=46 Identities=26% Similarity=0.176 Sum_probs=38.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
..+|||||||+|.+...++...+ .+++|+|+|+.+++.|++++..+
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcC
Confidence 46899999999988766654433 58999999999999999998754
No 215
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.71 E-value=3.7e-08 Score=92.52 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=53.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
+.+|||||||+|.....++..++ +.+++++|+|+++++.|++|++..+ +.++|+++.+|.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda 131 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDA 131 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCH
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCH
Confidence 45899999999999888888776 7899999999999999999999985 878899998873
No 216
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.70 E-value=9.5e-08 Score=93.52 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=50.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...+ +.+|+|+|+|+++++.|++|++.++ +.+ ++++..|.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~~~-v~~~~~d~ 135 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IEN-VIFVCGDG 135 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCS-EEEEESCG
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC-CCC-eEEEECCh
Confidence 45899999999999888887665 4679999999999999999999885 654 88888764
No 217
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.70 E-value=1.9e-07 Score=86.73 Aligned_cols=84 Identities=14% Similarity=0.220 Sum_probs=62.5
Q ss_pred EEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHH
Q 014664 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (420)
Q Consensus 76 ~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A 155 (420)
...+..+..+.. ...+.++.+++.. ....+|||||||+|.+...++...+ .+++++|+++.+++.|
T Consensus 65 ~~~~~~~~~~~~----~~~~~~~~~~l~~---------~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a 130 (235)
T 1jg1_A 65 PLPIPAGQTVSA----PHMVAIMLEIANL---------KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFA 130 (235)
T ss_dssp CEECSTTCEECC----HHHHHHHHHHHTC---------CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHH
T ss_pred CcccCCCceecc----HHHHHHHHHhcCC---------CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHH
Confidence 344555655543 3455566666642 1235899999999999888887766 8999999999999999
Q ss_pred HHHHHHCCCCCCcEEEEEcc
Q 014664 156 EKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 156 ~~N~~~N~~l~~rI~l~~~d 175 (420)
++|++.++ +.+ ++++.+|
T Consensus 131 ~~~~~~~~-~~~-v~~~~~d 148 (235)
T 1jg1_A 131 KRNLERAG-VKN-VHVILGD 148 (235)
T ss_dssp HHHHHHTT-CCS-EEEEESC
T ss_pred HHHHHHcC-CCC-cEEEECC
Confidence 99999884 644 8888776
No 218
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.70 E-value=5.5e-08 Score=91.29 Aligned_cols=68 Identities=12% Similarity=-0.009 Sum_probs=51.4
Q ss_pred HHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEE
Q 014664 94 YIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRK 173 (420)
Q Consensus 94 yi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~ 173 (420)
|.+.+++++.. ...+|||||||+|.+...++... ..+++|+|+|+.+++.|+++.+..+ .++.++.
T Consensus 49 ~m~~~a~~~~~----------~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~ 114 (236)
T 3orh_A 49 YMHALAAAASS----------KGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLK 114 (236)
T ss_dssp HHHHHHHHHTT----------TCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEE
T ss_pred HHHHHHHhhcc----------CCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEe
Confidence 55556665532 24689999999998876665443 3589999999999999999998764 3577776
Q ss_pred cc
Q 014664 174 VD 175 (420)
Q Consensus 174 ~d 175 (420)
++
T Consensus 115 ~~ 116 (236)
T 3orh_A 115 GL 116 (236)
T ss_dssp SC
T ss_pred eh
Confidence 65
No 219
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.70 E-value=1.9e-07 Score=81.69 Aligned_cols=119 Identities=12% Similarity=0.058 Sum_probs=82.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...++... .+++|+|+++.+++.|+++ . .+++++..| .
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~---~----~~v~~~~~d-~------------------ 69 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK---F----DSVITLSDP-K------------------ 69 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH---C----TTSEEESSG-G------------------
T ss_pred CCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh---C----CCcEEEeCC-C------------------
Confidence 4589999999999887777654 3999999999999999998 2 246766543 1
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ ..+++||+|+|+-.+..- .+
T Consensus 70 --------------------------------------~--~~~~~~D~v~~~~~l~~~---------------~~---- 90 (170)
T 3i9f_A 70 --------------------------------------E--IPDNSVDFILFANSFHDM---------------DD---- 90 (170)
T ss_dssp --------------------------------------G--SCTTCEEEEEEESCSTTC---------------SC----
T ss_pred --------------------------------------C--CCCCceEEEEEccchhcc---------------cC----
Confidence 0 024689999999766432 01
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEE-eCCc-----------CcHHHHHHHHHHcCCceEEEEEe
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VGRK-----------SNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsm-vgk~-----------~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
...++++..+.++++|++... .... -+.+.+.+.|+ |+..+++.+.
T Consensus 91 -------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 91 -------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred -------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 235666667777887776543 2211 24677888887 9887666553
No 220
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.70 E-value=3.5e-07 Score=88.54 Aligned_cols=61 Identities=11% Similarity=0.023 Sum_probs=48.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCC-CC-CCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP-HI-SELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~-~l-~~rI~l~~~d~ 176 (420)
+.+|||||||+|.+...++...+..+++++|+|+.+++.|+++...++ .+ ..+++++.+|.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~ 141 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDA 141 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCH
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECCh
Confidence 468999999999988777765556899999999999999999986431 01 35788887763
No 221
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.69 E-value=3.9e-07 Score=89.13 Aligned_cols=59 Identities=14% Similarity=0.011 Sum_probs=53.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.|+.+++++|+ +.+++.|++++...+ +.++|+++..|.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 228 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSF 228 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCT
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCC
Confidence 46899999999999888888889999999999 999999999999874 888999998874
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.68 E-value=8e-08 Score=93.84 Aligned_cols=58 Identities=19% Similarity=0.043 Sum_probs=51.9
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+|||||||+|.+...++.+.|+.+++++|+ +.+++.|++++..++ +.++|+++..|.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~ 226 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDM 226 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCT
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCC
Confidence 6999999999999888888888999999999 999999999988764 667899998864
No 223
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.68 E-value=1.6e-09 Score=102.21 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=45.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.+ +.+++|+|+|+.+++.|++|++. ..+++++.+|.
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~--~~~v~~id~~~~~~~~a~~~~~~----~~~v~~~~~D~ 84 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKI--SKQVTSIELDSHLFNLSSEKLKL----NTRVTLIHQDI 84 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHH--SSEEEESSSSCSSSSSSSCTTTT----CSEEEECCSCC
T ss_pred CCEEEEEeCCCCHHHHHHHHh--CCeEEEEECCHHHHHHHHHHhcc----CCceEEEECCh
Confidence 358999999999988777765 47999999999999999988752 24688887764
No 224
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.67 E-value=5.3e-08 Score=94.86 Aligned_cols=70 Identities=17% Similarity=0.172 Sum_probs=53.0
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcC--CeeEEecCcHHHHHHHHHHHHHCCCCCCcEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG--WSFVGSDMTDVALEWAEKNVKSNPHISELIE 170 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~--~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~ 170 (420)
+.+..|.+.+.. ....+|||||||+|.+...|+.+... .+|+|+|+|+++++.|+++. . .+++
T Consensus 29 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~----~~v~ 93 (279)
T 3uzu_A 29 GVIDAIVAAIRP---------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G----ELLE 93 (279)
T ss_dssp HHHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G----GGEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C----CCcE
Confidence 345566666642 12458999999999998888876432 45999999999999999994 2 3699
Q ss_pred EEEccCC
Q 014664 171 IRKVDNS 177 (420)
Q Consensus 171 l~~~d~~ 177 (420)
++.+|..
T Consensus 94 ~i~~D~~ 100 (279)
T 3uzu_A 94 LHAGDAL 100 (279)
T ss_dssp EEESCGG
T ss_pred EEECChh
Confidence 9999853
No 225
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.67 E-value=1.5e-07 Score=83.99 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=94.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC---------CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE-EccCCCCCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG---------WSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNSESTPSIQE 185 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~---------~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~-~~d~~~~~p~~~~ 185 (420)
..+|||||||+|.+...|+.+.+. .+++|+|+++.+ . + .+++++ ..|... .
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~--~---- 83 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTD--P---- 83 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTS--H----
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCC--H----
Confidence 358999999999999888877654 799999999831 1 2 246666 554321 0
Q ss_pred cccCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcc
Q 014664 186 SLTGKSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTS 265 (420)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a 265 (420)
+ ... .+...+ ++++||+|+||+++........
T Consensus 84 -------------~--------------------~~~-------~~~~~~--~~~~fD~V~~~~~~~~~~~~~~------ 115 (196)
T 2nyu_A 84 -------------R--------------------TSQ-------RILEVL--PGRRADVILSDMAPNATGFRDL------ 115 (196)
T ss_dssp -------------H--------------------HHH-------HHHHHS--GGGCEEEEEECCCCCCCSCHHH------
T ss_pred -------------H--------------------HHH-------HHHHhc--CCCCCcEEEeCCCCCCCCCccc------
Confidence 0 000 000000 1357999999986543211000
Q ss_pred cCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCe---eeEEEEE
Q 014664 266 CGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQT---CRWGLAW 342 (420)
Q Consensus 266 ~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t---~Rw~lAW 342 (420)
+. .........+++++..+++++|++...+........+...+++. +..+++.++..++. .+++++=
T Consensus 116 ----~~-----~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~~e~~~v~~ 185 (196)
T 2nyu_A 116 ----DH-----DRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKESSEVYFLAT 185 (196)
T ss_dssp ----HH-----HHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC--------EEEEEE
T ss_pred ----CH-----HHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccCceEEEEee
Confidence 00 00233456888889999999999887766667778888888764 66777777766653 5666766
Q ss_pred eecC
Q 014664 343 SFVP 346 (420)
Q Consensus 343 sF~~ 346 (420)
-|..
T Consensus 186 g~~~ 189 (196)
T 2nyu_A 186 QYHG 189 (196)
T ss_dssp EECC
T ss_pred ecCC
Confidence 6654
No 226
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.66 E-value=3.9e-08 Score=91.82 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=52.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhc-CCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL-GWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~-~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.....++...+ +.+++++|+++++++.|++|++.++ +.++|+++.+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d 132 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG-VAEKISLRLGP 132 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcC
Confidence 35899999999998888887766 6899999999999999999999885 77789998876
No 227
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.65 E-value=3.5e-08 Score=95.93 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=37.7
Q ss_pred CCeEEEECCchhH----HHHHHHHhhc----CCeeEEecCcHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANC----IYPLLGASLL----GWSFVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 116 ~~~vLDIGTGsG~----I~~~La~~~~----~~~vvavDIs~~AL~~A~~N~ 159 (420)
..+|+|+|||+|. |+.+|+...+ +|+|+|+|||++||+.|++++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 4799999999998 6666665544 589999999999999999986
No 228
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.65 E-value=2.2e-07 Score=92.60 Aligned_cols=60 Identities=17% Similarity=-0.036 Sum_probs=54.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...++.+.|+.+++++|+ +.+++.|++++...+ +.++|+++.+|..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLL 239 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEcccc
Confidence 46999999999999999998889999999999 999999999998874 7789999988753
No 229
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.64 E-value=4.3e-08 Score=91.80 Aligned_cols=59 Identities=15% Similarity=0.107 Sum_probs=47.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCc-HHHHHHH---HHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMT-DVALEWA---EKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs-~~AL~~A---~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.+.++++|+|+|+| +.+++.| +++++..+ +. +|.++.+|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~~-~v~~~~~d~ 87 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-LS-NVVFVIAAA 87 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-CS-SEEEECCBT
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-CC-CeEEEEcCH
Confidence 358999999999998888877788999999999 5556665 88887764 54 588887764
No 230
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.61 E-value=3.7e-07 Score=83.90 Aligned_cols=82 Identities=20% Similarity=0.148 Sum_probs=59.1
Q ss_pred EEEecCCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHH
Q 014664 76 NWWIPDGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA 155 (420)
Q Consensus 76 ~~~vp~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A 155 (420)
.+.+..++.+.. ...+.++.+++.. ....+|||||||+|.+...++... .+++|+|+++.+++.|
T Consensus 44 ~~~~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a 108 (231)
T 1vbf_A 44 ALPILPGINTTA----LNLGIFMLDELDL---------HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYA 108 (231)
T ss_dssp CEEEETTEEECC----HHHHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHH
T ss_pred ceeeCCCCccCC----HHHHHHHHHhcCC---------CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHH
Confidence 344555555433 3445555555532 124589999999999887777653 7999999999999999
Q ss_pred HHHHHHCCCCCCcEEEEEccC
Q 014664 156 EKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 156 ~~N~~~N~~l~~rI~l~~~d~ 176 (420)
++++..++ +++++..|.
T Consensus 109 ~~~~~~~~----~v~~~~~d~ 125 (231)
T 1vbf_A 109 SKLLSYYN----NIKLILGDG 125 (231)
T ss_dssp HHHHTTCS----SEEEEESCG
T ss_pred HHHHhhcC----CeEEEECCc
Confidence 99998652 688887763
No 231
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.60 E-value=7.8e-08 Score=91.93 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=51.5
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+.+.+|.+.+.. ....+|||||||+|.+...|+.+ +..+++|+|+|+.+++.|++| . . .+++++
T Consensus 18 ~i~~~iv~~~~~---------~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-~----~~v~~i 81 (249)
T 3ftd_A 18 GVLKKIAEELNI---------EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-D----ERLEVI 81 (249)
T ss_dssp HHHHHHHHHTTC---------CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-C----TTEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-C----CCeEEE
Confidence 455555555532 12458999999999998777654 457999999999999999987 2 1 368999
Q ss_pred EccCC
Q 014664 173 KVDNS 177 (420)
Q Consensus 173 ~~d~~ 177 (420)
.+|..
T Consensus 82 ~~D~~ 86 (249)
T 3ftd_A 82 NEDAS 86 (249)
T ss_dssp CSCTT
T ss_pred Ecchh
Confidence 88753
No 232
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=1e-06 Score=80.68 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=36.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.. +|+|+++.+++.|+++ +++++..|.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~---------~~~~~~~d~ 93 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR---------GVFVLKGTA 93 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT---------TCEEEECBT
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc---------CCEEEEccc
Confidence 358999999999887666433 9999999999999887 256766653
No 233
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.58 E-value=2.7e-08 Score=95.42 Aligned_cols=69 Identities=10% Similarity=-0.035 Sum_probs=49.9
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+.+.+|.+.+.. ....+|||||||+|.+.. +. +....+++|+|+|+++++.|+++...+ .+++++
T Consensus 8 ~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i 72 (252)
T 1qyr_A 8 FVIDSIVSAINP---------QKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG----PKLTIY 72 (252)
T ss_dssp HHHHHHHHHHCC---------CTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEE
T ss_pred HHHHHHHHhcCC---------CCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC----CceEEE
Confidence 455666666542 123579999999999987 54 322223999999999999999887543 368998
Q ss_pred EccC
Q 014664 173 KVDN 176 (420)
Q Consensus 173 ~~d~ 176 (420)
.+|.
T Consensus 73 ~~D~ 76 (252)
T 1qyr_A 73 QQDA 76 (252)
T ss_dssp CSCG
T ss_pred ECch
Confidence 8874
No 234
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.57 E-value=6.7e-08 Score=91.05 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=56.1
Q ss_pred CCceeCCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHh----hcCCeeEEecCcHHHHHHHH
Q 014664 81 DGQLCPTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGAS----LLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 81 ~g~LiPrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~----~~~~~vvavDIs~~AL~~A~ 156 (420)
.++.++..|.....+. +++... .+.+|||||||+|.+...|+.. .++.+|+|+|+++.+++.|+
T Consensus 59 ~~~~~~~~p~~~~~l~---~~l~~~---------~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 59 RGLRMLKDPDTQAVYH---DMLWEL---------RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp TTEECCSCHHHHHHHH---HHHHHH---------CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred ccccccCCHHHHHHHH---HHHHhc---------CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 3677776555444443 444321 1358999999999999888876 46789999999999999887
Q ss_pred HHHHHCCCCCCcEEEEEccC
Q 014664 157 KNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 157 ~N~~~N~~l~~rI~l~~~d~ 176 (420)
. +..+|+++.+|.
T Consensus 127 -----~--~~~~v~~~~gD~ 139 (236)
T 2bm8_A 127 -----S--DMENITLHQGDC 139 (236)
T ss_dssp -----G--GCTTEEEEECCS
T ss_pred -----c--cCCceEEEECcc
Confidence 1 235799998874
No 235
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.57 E-value=7.4e-07 Score=80.68 Aligned_cols=41 Identities=20% Similarity=0.198 Sum_probs=35.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N 158 (420)
..+|||||||+|.+...++.. +.+++|+|+++.+++.|+++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~ 73 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN--GTRVSGIEAFPEAAEQAKEK 73 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT--TCEEEEEESSHHHHHHHHTT
T ss_pred CCcEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh
Confidence 468999999999988777765 58999999999999998765
No 236
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.55 E-value=5.2e-07 Score=82.32 Aligned_cols=59 Identities=12% Similarity=-0.014 Sum_probs=47.0
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHH----HCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK----SNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~----~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+...++.+|+|+|+|+.+++.+.++++ ..+ + .+++++.+|.
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~-~~v~~~~~d~ 90 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-L-PNLLYLWATA 90 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-C-TTEEEEECCS
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-C-CceEEEecch
Confidence 458999999999999999888788999999999998886544443 332 3 3689988874
No 237
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.55 E-value=3.1e-06 Score=80.40 Aligned_cols=130 Identities=12% Similarity=0.062 Sum_probs=84.9
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCcccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQD 194 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~ 194 (420)
..+|||+|||+|.....++... +.-+|+|+|+++.+++...+.++.. .+|.++.+|... |
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~--~------------- 137 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARF--P------------- 137 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTC--G-------------
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEccccc--c-------------
Confidence 4689999999999877777654 4679999999999986555554443 258888887431 0
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCccc
Q 014664 195 ESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMV 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~ 274 (420)
..+..+ .++||+|+||-|+ .+
T Consensus 138 -----------------------------------~~~~~~---~~~~D~I~~d~a~------------------~~--- 158 (232)
T 3id6_C 138 -----------------------------------QSYKSV---VENVDVLYVDIAQ------------------PD--- 158 (232)
T ss_dssp -----------------------------------GGTTTT---CCCEEEEEECCCC------------------TT---
T ss_pred -----------------------------------hhhhcc---ccceEEEEecCCC------------------hh---
Confidence 001111 3579999999653 01
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCeEEEEEe---------CCcCcHHHHHHHHHHcCCceEEEEEe
Q 014664 275 CSGGERAFITRIIEDSVALKQTFRWYTSMV---------GRKSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 275 ~~GGel~Fv~riI~eS~~l~~~~~w~tsmv---------gk~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
. ...++..+..+++++|++...+ ..++..+.....|++.|+..+++...
T Consensus 159 ----~---~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 159 ----Q---TDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp ----H---HHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEEC
T ss_pred ----H---HHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 1 1112333444778888876554 12345577888999999887776654
No 238
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.53 E-value=9.9e-07 Score=84.15 Aligned_cols=42 Identities=12% Similarity=0.151 Sum_probs=36.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~ 159 (420)
..+|||+|||+|.....|+.. +++|+|+|+|+.|++.|++..
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~ 110 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQ 110 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHT
T ss_pred CCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhc
Confidence 458999999999988777754 789999999999999998765
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.53 E-value=1.2e-07 Score=92.23 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=70.5
Q ss_pred ccCCCHHHHHHHHHHHhhhcCCcEEEecCCceeCCCCCcHhHHHHHHHH----HccCCCCCCCCCCCCCeEEEECCchhH
Q 014664 53 IDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYIHWIEDL----LSSNIIPTTSRNGDKVKGFDIGTGANC 128 (420)
Q Consensus 53 IDf~d~~a~r~Lt~aLL~~ffgl~~~vp~g~LiPrvP~R~nyi~wi~dl----l~~~~~~~~~~~~~~~~vLDIGTGsG~ 128 (420)
.|+.|+.++++..+.+|.... .|-+-+.+++++ +... ..+.+|||||||.|.
T Consensus 90 ~~~~d~~~~~~~~~~~l~~H~----------------STreRLp~lD~fY~~i~~~i--------~~p~~VLDLGCG~Gp 145 (281)
T 3lcv_B 90 VDAGDDEAVRAALLRAMSVHI----------------STRERLPHLDEFYRELFRHL--------PRPNTLRDLACGLNP 145 (281)
T ss_dssp HTTTCHHHHHHHHHHHHTTSH----------------HHHHHGGGHHHHHHHHGGGS--------CCCSEEEETTCTTGG
T ss_pred cccCChHHHHHHHHHHHhcCC----------------CHHHHhHhHHHHHHHHHhcc--------CCCceeeeeccCccH
Confidence 588899999888887776432 222222333333 2221 135689999999999
Q ss_pred HHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 129 IYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 129 I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
++..++...+..+++|+|||+.+++.+++|+..|+ +. ..+...|.
T Consensus 146 LAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-~~--~~~~v~D~ 190 (281)
T 3lcv_B 146 LAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-VP--HRTNVADL 190 (281)
T ss_dssp GCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-CC--EEEEECCT
T ss_pred HHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-CC--ceEEEeee
Confidence 98777766688999999999999999999999985 65 56666664
No 240
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.52 E-value=3.8e-07 Score=89.46 Aligned_cols=93 Identities=8% Similarity=-0.073 Sum_probs=60.3
Q ss_pred CcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHH
Q 014664 240 EQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRK 319 (420)
Q Consensus 240 ~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~ 319 (420)
++||+|+||++....... ... ... ...++.++++++.++++++|+|.+.+-.......+.+.|++
T Consensus 122 ~~fD~Vvsn~~~~~~g~~-------~~d-~~~-------~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~ 186 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHV-------TKE-NDS-------KEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGH 186 (290)
T ss_dssp SCEEEEEECCCCCC---C-------CSC-CCC-------CCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTT
T ss_pred CcccEEEEcCCccccccc-------ccc-ccc-------hHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHH
Confidence 579999999752211000 011 111 24567899999999999999998866556667899999999
Q ss_pred cCCceEEEEEecCCCeeeEEEEEeecCc
Q 014664 320 VGVTIVKTTEFVQGQTCRWGLAWSFVPP 347 (420)
Q Consensus 320 ~g~~~v~~~e~~qG~t~Rw~lAWsF~~~ 347 (420)
.|+..++++.--......++++..|...
T Consensus 187 ~GF~~v~~~asr~~s~e~~lv~~~~~~~ 214 (290)
T 2xyq_A 187 FSWWTAFVTNVNASSSEAFLIGANYLGK 214 (290)
T ss_dssp EEEEEEEEEGGGTTSSCEEEEEEEECSS
T ss_pred cCCcEEEEEEcCCCchheEEecCCccCC
Confidence 9887777661111122456667676643
No 241
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.51 E-value=1.7e-07 Score=99.33 Aligned_cols=118 Identities=24% Similarity=0.322 Sum_probs=70.0
Q ss_pred CCCCCCCCCCCCCHHHHHhhCCCcccceeccCCCCccccCCCHHHHHHHHHHHhhhcCCcEEEecCCceeCCCCCcHhHH
Q 014664 16 IHPKNKYSENPPDFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLHDHGLNWWIPDGQLCPTVPNRSNYI 95 (420)
Q Consensus 16 mHprN~y~~~~~dF~~La~~yP~l~~~v~~~~~g~~~IDf~d~~a~r~Lt~aLL~~ffgl~~~vp~g~LiPrvP~R~nyi 95 (420)
-|..|.|....-|-..+.+..|+.-+-+. |... | +....+ .+..|+++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~pe~y~~i~----~~~~--~----------------------~~~~~r---~~~~r~~~i 53 (569)
T 4azs_A 5 HHHENLYFQGTKDLNTLVSELPEIYQTIF----GHPE--W----------------------DGDAAR---DCNQRLDLI 53 (569)
T ss_dssp ------------CHHHHHHHSSCCCBCCT----TCGG--G----------------------TTTCSB---CCHHHHHHH
T ss_pred cccccccccccccHHHHHhhCHHHHhhhc----CChh--h----------------------cccccc---chHHHHHHH
Confidence 36677777666678888887776433221 1111 1 101111 123466776
Q ss_pred HHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 96 HWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 96 ~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
....+.+... -+++.+|||||||.|.+...||.. +++|+|+|+++.++++|+..+..++.+ .|+++..+
T Consensus 54 ~~~~~~~~~~-------~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~--~~~~~~~~ 122 (569)
T 4azs_A 54 TEQYDNLSRA-------LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDF--AAEFRVGR 122 (569)
T ss_dssp HHHHHHHHHH-------HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTS--EEEEEECC
T ss_pred HHHHHHHHhh-------cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCC--ceEEEECC
Confidence 6555554421 134679999999999888777753 889999999999999999999887523 58888775
No 242
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.50 E-value=2.2e-06 Score=78.48 Aligned_cols=52 Identities=13% Similarity=0.155 Sum_probs=42.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+...+ +++|+|+|+.+++.|+++. .+++++..|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~ 92 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-------PDATLHQGDM 92 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-------TTCEEEECCT
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-------CCCEEEECCH
Confidence 45899999999999888876644 8999999999999998874 1377777764
No 243
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.50 E-value=3.3e-06 Score=81.05 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=40.2
Q ss_pred CCeEEEECCchhHHHHH----HHHhhcCCee--EEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 116 KVKGFDIGTGANCIYPL----LGASLLGWSF--VGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~----La~~~~~~~v--vavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+.+|||||||+|.+... ++.+.+++.+ +|+|+|+++++.|+++++..+++ ..+.+.
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~ 114 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFA 114 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEE
Confidence 45899999999975432 3334467755 99999999999999998754223 345543
No 244
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.49 E-value=8.5e-08 Score=92.60 Aligned_cols=58 Identities=10% Similarity=0.081 Sum_probs=45.6
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC---C---C-CCCcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN---P---H-ISELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N---~---~-l~~rI~l~~~d~ 176 (420)
.+|||+|||+|..++.++.+ +.+|+++|+++.+++++++|++.. . + +..+|+++.+|.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 58999999999998888765 678999999999888888876531 1 1 225799998873
No 245
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.49 E-value=6.5e-07 Score=82.59 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=48.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhc------CCeeEEecCcHHHHHHHHHHHHHCCCC----CCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLL------GWSFVGSDMTDVALEWAEKNVKSNPHI----SELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~------~~~vvavDIs~~AL~~A~~N~~~N~~l----~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++.... ..+++|+|+++.+++.|++|++.++ + ..+++++..|.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~ 154 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDG 154 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCc
Confidence 35899999999998888876554 3699999999999999999998652 1 24688887763
No 246
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.49 E-value=6e-07 Score=92.74 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=50.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHH-------HHHHHHCCCCC-CcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWA-------EKNVKSNPHIS-ELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A-------~~N~~~N~~l~-~rI~l~~~d 175 (420)
..+|||||||+|.+...++...+..+|+|+|+++.+++.| ++|++.++ +. .+|+++.+|
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~gD 309 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLKK 309 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEESS
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEcC
Confidence 4689999999999988888766656899999999999999 99998874 54 679998775
No 247
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.42 E-value=6.7e-07 Score=82.87 Aligned_cols=55 Identities=24% Similarity=0.280 Sum_probs=45.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|||||||+|.+...|+...+ +|+|+|+|+.+++.|+++... .+++++..|..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d~~ 111 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA-----ANISYRLLDGL 111 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC-----TTEEEEECCTT
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc-----cCceEEECccc
Confidence 45899999999998888876544 899999999999999998731 36899888753
No 248
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.42 E-value=1.5e-06 Score=84.11 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=47.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCC-----CCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPH-----ISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~-----l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++. .+..+++|+|+|+.+++.|+++...++. ...+++++..|.
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred CCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 45899999999988776665 4578999999999999999999875410 123688888875
No 249
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.41 E-value=4.2e-07 Score=85.61 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=44.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...++...++.+++|+|+++.+++.|+++. .++.++..|.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 139 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASS 139 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCT
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcch
Confidence 45899999999998888887767889999999999999998764 1366766653
No 250
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.41 E-value=4.9e-07 Score=86.67 Aligned_cols=68 Identities=13% Similarity=0.182 Sum_probs=49.3
Q ss_pred CCCCCcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCC
Q 014664 86 PTVPNRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI 165 (420)
Q Consensus 86 PrvP~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l 165 (420)
|..| ...+.||.++.. ...+|||||||+|.....|+.. ..+|+|+|+|+.+++.|++ +
T Consensus 23 p~yp--~~l~~~l~~~~~-----------~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~----~--- 80 (257)
T 4hg2_A 23 PRYP--RALFRWLGEVAP-----------ARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR----H--- 80 (257)
T ss_dssp CCCC--HHHHHHHHHHSS-----------CSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC----C---
T ss_pred CCcH--HHHHHHHHHhcC-----------CCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh----c---
Confidence 5556 345666665542 2358999999999887777643 5799999999999987752 2
Q ss_pred CCcEEEEEccC
Q 014664 166 SELIEIRKVDN 176 (420)
Q Consensus 166 ~~rI~l~~~d~ 176 (420)
.+|+++.++.
T Consensus 81 -~~v~~~~~~~ 90 (257)
T 4hg2_A 81 -PRVTYAVAPA 90 (257)
T ss_dssp -TTEEEEECCT
T ss_pred -CCceeehhhh
Confidence 3588887764
No 251
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.38 E-value=6.3e-07 Score=86.59 Aligned_cols=45 Identities=11% Similarity=-0.012 Sum_probs=39.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
..+|||||||+|.++..|+.+ +.+|+|+|+|+.|++.|++|+..+
T Consensus 46 g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred cCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc
Confidence 458999999999988777754 679999999999999999998654
No 252
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.38 E-value=1.5e-06 Score=78.50 Aligned_cols=48 Identities=13% Similarity=0.149 Sum_probs=38.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCC-eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~-~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|||||||+|.....+ +. +++|+|+|+.+++.|+++. .++.++..|
T Consensus 37 ~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d 85 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAW 85 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCC
T ss_pred CCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcc
Confidence 458999999999875544 56 9999999999999999886 136666655
No 253
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.38 E-value=9.4e-07 Score=89.05 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=35.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N 158 (420)
..+|||||||+|.+...|+.+ +++++|+|+|+.+++.|+++
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT
T ss_pred CCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc
Confidence 468999999999987777643 67999999999999999866
No 254
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.33 E-value=9.1e-06 Score=78.22 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=47.4
Q ss_pred CeEEEECCch---hHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGs---G~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++||||||+ |.+...+....++.+|+++|+|+.+++.|++++..+ .+++++.+|..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~----~~v~~~~~D~~ 138 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD----PNTAVFTADVR 138 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC----TTEEEEECCTT
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC----CCeEEEEeeCC
Confidence 5899999999 987655555567899999999999999999998543 47999998854
No 255
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.30 E-value=1.3e-06 Score=96.52 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=56.0
Q ss_pred HhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCC-----CC
Q 014664 92 SNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNP-----HI 165 (420)
Q Consensus 92 ~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~-----~l 165 (420)
...+.++.+++... ...+|||||||+|.+...|+... +..+|+|+|+|+.+++.|++++.... ++
T Consensus 707 eqRle~LLelL~~~---------~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl 777 (950)
T 3htx_A 707 KQRVEYALKHIRES---------SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV 777 (950)
T ss_dssp HHHHHHHHHHHHHS---------CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC
T ss_pred HHHHHHHHHHhccc---------CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC
Confidence 44566666666531 34689999999999887777654 34799999999999999999775321 12
Q ss_pred CCcEEEEEccCC
Q 014664 166 SELIEIRKVDNS 177 (420)
Q Consensus 166 ~~rI~l~~~d~~ 177 (420)
.+|+++.+|..
T Consensus 778 -~nVefiqGDa~ 788 (950)
T 3htx_A 778 -KSATLYDGSIL 788 (950)
T ss_dssp -SEEEEEESCTT
T ss_pred -CceEEEECchH
Confidence 36999988753
No 256
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.27 E-value=3.4e-06 Score=79.32 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=36.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVK 160 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~ 160 (420)
..+|||||||+|.+...|+.. +.+++|+|+|+.+++.|+++..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC
Confidence 358999999999987777654 6799999999999999998754
No 257
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.22 E-value=4.5e-06 Score=88.09 Aligned_cols=58 Identities=12% Similarity=0.052 Sum_probs=42.1
Q ss_pred CCeEEEECCchhHHHHHHHHhh-------------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-------------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-------------~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d 175 (420)
..+|+|-+||||.......... ....++|.|+++.++.+|+.|+..++ +. .-.+..+|
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-~~-~~~I~~~d 288 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-LE-YPRIDPEN 288 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-CS-CCEEECSC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-Cc-cccccccc
Confidence 3589999999998754443322 13569999999999999999998875 43 23444444
No 258
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.21 E-value=8.5e-06 Score=79.66 Aligned_cols=59 Identities=12% Similarity=-0.106 Sum_probs=41.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCC-----cEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISE-----LIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~-----rI~l~~~d~ 176 (420)
..+|||||||+|.....++. ...++|+|+|+|+.+++.|++.....+ +.. .+++...+.
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~ 112 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETI 112 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCT
T ss_pred CCeEEEEecCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhc
Confidence 46899999999953333332 345799999999999999999876542 221 256666653
No 259
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.20 E-value=4.8e-06 Score=82.20 Aligned_cols=57 Identities=12% Similarity=0.038 Sum_probs=43.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.++.+++++|++ .++. +++++.. .+.++|+++.+|.
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~-~~~~~v~~~~~d~ 241 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAP-DVAGRWKVVEGDF 241 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCG-GGTTSEEEEECCT
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccccc-CCCCCeEEEecCC
Confidence 468999999999999889988899999999994 4444 3333333 2567899988764
No 260
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.18 E-value=4.2e-06 Score=80.53 Aligned_cols=56 Identities=14% Similarity=-0.034 Sum_probs=46.0
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+.+|||||||.|.++..+. +..+++|+|||+.+++.|++|+..++ . ...+...|.
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g-~--~~~~~v~D~ 160 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD-W--DFTFALQDV 160 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT-C--EEEEEECCT
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC-C--CceEEEeec
Confidence 46799999999998765443 78899999999999999999999874 3 466766664
No 261
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.18 E-value=2.7e-06 Score=81.75 Aligned_cols=58 Identities=5% Similarity=-0.293 Sum_probs=44.7
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH--CCCCCCcEEEEEcc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS--NPHISELIEIRKVD 175 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~--N~~l~~rI~l~~~d 175 (420)
+.+|||||||+|.+...++.. + .+++++|+|+++++.|+++... ++.-..+++++.+|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D 132 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQL 132 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSG
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEech
Confidence 468999999999987777666 6 8999999999999999987632 11012478887665
No 262
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.17 E-value=9.7e-06 Score=73.49 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=71.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||+|.+...+ ..+++|+|+++. + +.++..|...
T Consensus 68 ~~~vLDiG~G~G~~~~~l-----~~~v~~~D~s~~-----------~------~~~~~~d~~~----------------- 108 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI-----RNPVHCFDLASL-----------D------PRVTVCDMAQ----------------- 108 (215)
T ss_dssp TSCEEEETCTTCHHHHHC-----CSCEEEEESSCS-----------S------TTEEESCTTS-----------------
T ss_pred CCeEEEECCcCCHHHHHh-----hccEEEEeCCCC-----------C------ceEEEecccc-----------------
Confidence 358999999999876555 368999999987 1 3445554321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
+ . ..++.||+|+|+..++. . +
T Consensus 109 -----------------------------------~--~--~~~~~fD~v~~~~~l~~--~--------------~---- 129 (215)
T 2zfu_A 109 -----------------------------------V--P--LEDESVDVAVFCLSLMG--T--------------N---- 129 (215)
T ss_dssp -----------------------------------C--S--CCTTCEEEEEEESCCCS--S--------------C----
T ss_pred -----------------------------------C--C--CCCCCEeEEEEehhccc--c--------------C----
Confidence 0 0 12467999999876631 0 1
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEE-eC-CcCcHHHHHHHHHHcCCceEE
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSM-VG-RKSNLKFLISKLRKVGVTIVK 326 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsm-vg-k~~~l~~l~~~L~~~g~~~v~ 326 (420)
...++++...+++++|++... .. ...+...+.+.|++.|+..+.
T Consensus 130 -------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 130 -------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred -------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 235666677788888876543 32 224789999999999997655
No 263
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.10 E-value=2.6e-05 Score=77.65 Aligned_cols=52 Identities=19% Similarity=0.022 Sum_probs=43.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.++.+++++|+ +.+++.|++ . .+|+++..|.
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~ 261 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP----L----SGIEHVGGDM 261 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----C----TTEEEEECCT
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh----c----CCCEEEeCCc
Confidence 46899999999999988988888999999999 999887753 1 2588887764
No 264
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.10 E-value=1.9e-06 Score=81.22 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=35.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~ 159 (420)
..+|||||||+|.+...|+.. ...+|+|+|+|+.+++.|+++.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTC
T ss_pred CCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhC
Confidence 458999999999988777655 3359999999999999987753
No 265
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.09 E-value=2.2e-05 Score=77.46 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=43.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.|+.+++++|+ +.+++.|++ . .+|+++.+|.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----~----~~v~~~~~d~ 240 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----S----NNLTYVGGDM 240 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----B----TTEEEEECCT
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc----C----CCcEEEeccc
Confidence 46899999999999888988888999999999 999887764 2 2388887764
No 266
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.06 E-value=2.7e-05 Score=77.75 Aligned_cols=52 Identities=15% Similarity=0.102 Sum_probs=44.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.+...|+.+.|+.+++++|+ +.+++.|+++ .+|+++.+|.
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~ 255 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDM 255 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCC
Confidence 46899999999999999999999999999999 8888776531 3689988874
No 267
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.02 E-value=3.9e-06 Score=80.83 Aligned_cols=49 Identities=12% Similarity=0.163 Sum_probs=34.8
Q ss_pred CCcHhH-HHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 89 PNRSNY-IHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 89 P~R~ny-i~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
..|..| +.|+.+. ..+ ....+|||||||+|.....++.. .+|+|+|+++
T Consensus 56 ~sR~a~KL~~i~~~---~~~------~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~ 105 (265)
T 2oxt_A 56 VSRGTAKLAWMEER---GYV------ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT 105 (265)
T ss_dssp SSTHHHHHHHHHHH---TSC------CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC
T ss_pred cchHHHHHHHHHHc---CCC------CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch
Confidence 567777 5555554 111 12358999999999887666544 6899999998
No 268
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.99 E-value=0.00011 Score=72.88 Aligned_cols=59 Identities=17% Similarity=0.056 Sum_probs=50.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+++|||||+|.....++.+.|+.+++..|. |.+++.|++++... ..++|+++.+|..
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~--~~~rv~~~~gD~~ 238 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ--EEEQIDFQEGDFF 238 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTT
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc--ccCceeeecCccc
Confidence 35899999999999999999999999999998 88999999998754 4689999988854
No 269
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.97 E-value=5.3e-06 Score=80.43 Aligned_cols=49 Identities=14% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCcHhH-HHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 89 PNRSNY-IHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 89 P~R~ny-i~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
..|..| +.|+.+. ..+ ....+|||||||+|.....++.+ .+|+|+|+++
T Consensus 64 ~sR~a~KL~~i~~~---~~~------~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~ 113 (276)
T 2wa2_A 64 VSRGTAKLAWIDER---GGV------ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT 113 (276)
T ss_dssp -CHHHHHHHHHHHT---TSC------CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC
T ss_pred CchHHHHHHHHHHc---CCC------CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch
Confidence 567766 5555543 111 12358999999999887666654 5899999998
No 270
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.94 E-value=3.5e-05 Score=75.66 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..++||||||+|.....|+.. ...+|+|+|+++.+|++|.+
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHH
T ss_pred ccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHH
Confidence 458999999999887666543 44599999999999998654
No 271
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.92 E-value=5.9e-05 Score=74.55 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=42.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.++.+++++|+ +.+++.|++ . .+|+++..|.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~ 245 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-------N-ENLNFVGGDM 245 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-------C-SSEEEEECCT
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-------C-CCcEEEeCcc
Confidence 35899999999999989988888999999999 788876653 1 2488887763
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.81 E-value=4.5e-05 Score=82.21 Aligned_cols=61 Identities=8% Similarity=-0.016 Sum_probs=45.6
Q ss_pred CCCeEEEECCchhHHHHHH--HHhhcC--CeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 115 DKVKGFDIGTGANCIYPLL--GASLLG--WSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~L--a~~~~~--~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
+...|+|+|||+|.+.... |.+..+ .+|+|+|-++. ...|+++++.|+ ++++|+++++|..
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~-~~dkVtVI~gd~e 421 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEE-WGSQVTVVSSDMR 421 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHT-TGGGEEEEESCTT
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhcc-CCCeEEEEeCcce
Confidence 3467999999999762221 112222 37899999985 557899999995 9999999999854
No 273
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.78 E-value=0.00012 Score=72.91 Aligned_cols=52 Identities=15% Similarity=0.010 Sum_probs=44.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+|||||||+|.....++.+.|+.+++++|+ +.+++.|++ ..+|+++.+|.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~D~ 253 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ--------FPGVTHVGGDM 253 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCT
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh--------cCCeEEEeCCc
Confidence 46899999999999999998899999999999 888877653 14799988874
No 274
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.48 E-value=0.00057 Score=59.93 Aligned_cols=107 Identities=7% Similarity=-0.081 Sum_probs=70.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCCCCCCcccccccCCccccc
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNSESTPSIQESLTGKSVQDE 195 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~~~~p~~~~~~~~~~~~~~ 195 (420)
..+|||||||. +++|+|+.+++.|+++... .++++..|..+
T Consensus 13 g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~------~~~~~~~d~~~----------------- 53 (176)
T 2ld4_A 13 GQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN------EGRVSVENIKQ----------------- 53 (176)
T ss_dssp TSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT------TSEEEEEEGGG-----------------
T ss_pred CCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc------CcEEEEechhc-----------------
Confidence 46899999996 3499999999999987532 37777776321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCCCCcccc
Q 014664 196 SNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVC 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~ 275 (420)
. + +.+. .+++||+|+|+=-+..- ..+
T Consensus 54 --~-------------------------------~-~~~~--~~~~fD~V~~~~~l~~~--------------~~~---- 79 (176)
T 2ld4_A 54 --L-------------------------------L-QSAH--KESSFDIILSGLVPGST--------------TLH---- 79 (176)
T ss_dssp --G-------------------------------G-GGCC--CSSCEEEEEECCSTTCC--------------CCC----
T ss_pred --C-------------------------------c-cccC--CCCCEeEEEECChhhhc--------------ccC----
Confidence 0 0 0000 24689999997322210 011
Q ss_pred cCchHHHHHHHHHHHHHhhcCCeEEEEEeC---------CcCcHHHHHHHHHHcCC
Q 014664 276 SGGERAFITRIIEDSVALKQTFRWYTSMVG---------RKSNLKFLISKLRKVGV 322 (420)
Q Consensus 276 ~GGel~Fv~riI~eS~~l~~~~~w~tsmvg---------k~~~l~~l~~~L~~~g~ 322 (420)
..+++++..+.++++|++..... .......+.+.|++.|+
T Consensus 80 -------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 80 -------SAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp -------CHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred -------HHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 14667777888899998765321 01237899999999999
No 275
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.48 E-value=0.00023 Score=69.43 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=46.6
Q ss_pred CeEEEECCch---hHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGA---NCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGs---G~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++||||||. |.+..++....|+++|+++|+|+.+|+.|++.+..++ ..+++++.+|..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~ 141 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADML 141 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEeccc
Confidence 5899999996 4443333344588999999999999999999987542 357999999865
No 276
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.46 E-value=9e-05 Score=66.13 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=30.3
Q ss_pred CCeEEEECCchhH-HHHHHHHhhcCCeeEEecCcHHHHH
Q 014664 116 KVKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALE 153 (420)
Q Consensus 116 ~~~vLDIGTGsG~-I~~~La~~~~~~~vvavDIs~~AL~ 153 (420)
+.++||||||+|. ++..|+.. .+..|+|+||++.|++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc
Confidence 3589999999994 87777643 5789999999988765
No 277
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.45 E-value=6.7e-05 Score=76.98 Aligned_cols=51 Identities=20% Similarity=0.140 Sum_probs=38.3
Q ss_pred CCCeEEEECCc------hhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 115 DKVKGFDIGTG------ANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 115 ~~~~vLDIGTG------sG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+.+||||||| +|...+.++.++ ++.+|+|+|+|+.+. .. ..+|+++.+|.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~---~~rI~fv~GDa 273 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD---ELRIRTIQGDQ 273 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC---BTTEEEEECCT
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc---CCCcEEEEecc
Confidence 35799999999 555555566554 789999999999972 12 35799999885
No 278
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.40 E-value=8.9e-05 Score=72.72 Aligned_cols=29 Identities=17% Similarity=0.040 Sum_probs=24.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDI 147 (420)
..+|||||||+|.....++.+ .+|+|+|+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~ 111 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKG 111 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEec
Confidence 358999999999987666654 47999999
No 279
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.23 E-value=0.0016 Score=60.59 Aligned_cols=72 Identities=11% Similarity=0.083 Sum_probs=54.7
Q ss_pred cHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCC--CCc
Q 014664 91 RSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHI--SEL 168 (420)
Q Consensus 91 R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l--~~r 168 (420)
..+-..++...+.. ..+||+||||.+.+ .++ +.++.+++.+|+|++..+.|++|++.++ + .++
T Consensus 17 ~~~~~~~L~~~l~~-----------a~~VLEiGtGySTl--~lA-~~~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~ 81 (202)
T 3cvo_A 17 PPAEAEALRMAYEE-----------AEVILEYGSGGSTV--VAA-ELPGKHVTSVESDRAWARMMKAWLAANP-PAEGTE 81 (202)
T ss_dssp CHHHHHHHHHHHHH-----------CSEEEEESCSHHHH--HHH-TSTTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCE
T ss_pred CHHHHHHHHHHhhC-----------CCEEEEECchHHHH--HHH-HcCCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCc
Confidence 34555666554432 35899999986544 333 3447899999999999999999999985 7 789
Q ss_pred EEEEEccCC
Q 014664 169 IEIRKVDNS 177 (420)
Q Consensus 169 I~l~~~d~~ 177 (420)
|+++.++..
T Consensus 82 I~~~~gda~ 90 (202)
T 3cvo_A 82 VNIVWTDIG 90 (202)
T ss_dssp EEEEECCCS
T ss_pred eEEEEeCch
Confidence 999998853
No 280
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.19 E-value=0.00095 Score=64.69 Aligned_cols=45 Identities=11% Similarity=0.047 Sum_probs=37.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
...|||++||||-++..+ ...+.+++|+|+++++++.|++|++..
T Consensus 236 ~~~vlD~f~GsGt~~~~a--~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAA--ARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TCEEEETTCTTTHHHHHH--HHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH--HHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 358999999999876443 345789999999999999999999764
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.15 E-value=0.0006 Score=66.70 Aligned_cols=53 Identities=13% Similarity=-0.012 Sum_probs=44.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
...+||.+||.|.-...|+.+ +.+++|+|+|+.|++.|++ ++. +++++++++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f 75 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNF 75 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCG
T ss_pred CCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCc
Confidence 358999999999988888766 7799999999999999998 532 4899998864
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.14 E-value=0.00032 Score=76.36 Aligned_cols=60 Identities=15% Similarity=0.001 Sum_probs=44.4
Q ss_pred CCeEEEECCchhHHHH--HHHHhh-----------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYP--LLGASL-----------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~--~La~~~-----------~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...|||+|||+|.+.. +-|.+. ...+|+|+|.++.|...++.... |+ ++++|+++++|..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng-~~d~VtVI~gd~e 482 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RT-WKRRVTIIESDMR 482 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HT-TTTCSEEEESCGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cC-CCCeEEEEeCchh
Confidence 4589999999998752 222221 13489999999998877666555 64 9999999999753
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.84 E-value=0.0031 Score=63.42 Aligned_cols=145 Identities=8% Similarity=0.033 Sum_probs=89.8
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCC-----CcEEEEEccCCCCCCcccccccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHIS-----ELIEIRKVDNSESTPSIQESLTGK 190 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~-----~rI~l~~~d~~~~~p~~~~~~~~~ 190 (420)
..+|||+|+|.|.=...|+....+-.++|.|+++.-++..++|+++.+ .. ..|.+...|...
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~-~~~~~~~~~v~v~~~D~~~------------ 215 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYV-PEEIRDGNQVRVTSWDGRK------------ 215 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHS-CTTTTTSSSEEEECCCGGG------------
T ss_pred CCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhh-hhhhccCCceEEEeCchhh------------
Confidence 458999999999877777766555689999999999999999998763 32 345555443210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCc-ccccCCCCcccCCC
Q 014664 191 SVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESM-EEAGLNPKTSCGGT 269 (420)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~-eea~~eP~~a~~G~ 269 (420)
+... ..+.||.|++.+|=-.+. -....+|..-..-.
T Consensus 216 -----------------------------------------~~~~--~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~ 252 (359)
T 4fzv_A 216 -----------------------------------------WGEL--EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSR 252 (359)
T ss_dssp -----------------------------------------HHHH--STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGG
T ss_pred -----------------------------------------cchh--ccccCCEEEECCccCCCCCcccccChhhhhhCC
Confidence 1111 246899999999953210 11112333221111
Q ss_pred CCcccccCchH-HHHHHHHHHHHHhhcCCeEE---EEEeCCcCcHHHHHHHHHHc
Q 014664 270 PEEMVCSGGER-AFITRIIEDSVALKQTFRWY---TSMVGRKSNLKFLISKLRKV 320 (420)
Q Consensus 270 ~~Em~~~GGel-~Fv~riI~eS~~l~~~~~w~---tsmvgk~~~l~~l~~~L~~~ 320 (420)
..+. -.+ .+=.+|++.+..+++++|.. |+-+...++-.-|...|++.
T Consensus 253 ~~~~----~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 253 KKER----QILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp HHHH----HTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 1100 011 23357888888888887753 44556567777677677654
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.76 E-value=0.037 Score=54.22 Aligned_cols=63 Identities=10% Similarity=0.048 Sum_probs=47.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHH-CC-CC-CCcEEEEEccCC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKS-NP-HI-SELIEIRKVDNS 177 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~-N~-~l-~~rI~l~~~d~~ 177 (420)
.+.+||=||-|.|.+.-.++...+..+++.+|||++.+++|++-... +. .+ ..|++++.+|..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~ 148 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGV 148 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTT
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHH
Confidence 45789999999998876666554557899999999999999986532 11 01 358999988854
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.72 E-value=0.0092 Score=57.10 Aligned_cols=46 Identities=17% Similarity=0.165 Sum_probs=33.3
Q ss_pred CCeEEEECCchhHHHHHHHHh-------hcC-----CeeEEecCcH---HHHH-----------HHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGAS-------LLG-----WSFVGSDMTD---VALE-----------WAEKNVKS 161 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~-------~~~-----~~vvavDIs~---~AL~-----------~A~~N~~~ 161 (420)
..+|||||+|+|.-.+.++.. .|+ .+|+++|..| +.++ +|+++++.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~ 132 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQ 132 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHT
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHh
Confidence 469999999999876665443 342 5899999887 4333 77788765
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.59 E-value=0.0023 Score=61.97 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=49.6
Q ss_pred CCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcC----------
Q 014664 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKS---------- 308 (420)
Q Consensus 239 ~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~---------- 308 (420)
+++||+|+|||||+...+.... +.. . +. +..-...+.++..++.++..+++++|++..++|...
T Consensus 38 ~~s~DlIvtdPPY~~~~~y~~~-~~~-~-~~---~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~~g~~~ 111 (297)
T 2zig_A 38 EASVHLVVTSPPYWTLKRYEDT-PGQ-L-GH---IEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAVARRRFGRHL 111 (297)
T ss_dssp TTCEEEEEECCCCCCCC--------C-C-HH---HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEEECC----EE
T ss_pred CCceeEEEECCCCCCccccCCC-hhh-h-cc---cccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCccccccCCccc
Confidence 4689999999999865321111 100 0 00 000000234567889999999999999988888321
Q ss_pred ---cHHHHHHHHHHcCCceE
Q 014664 309 ---NLKFLISKLRKVGVTIV 325 (420)
Q Consensus 309 ---~l~~l~~~L~~~g~~~v 325 (420)
....+...+++.|+...
T Consensus 112 ~~~~~~~l~~~~~~~Gf~~~ 131 (297)
T 2zig_A 112 VFPLHADIQVRCRKLGFDNL 131 (297)
T ss_dssp EECHHHHHHHHHHHTTCEEE
T ss_pred ccccHHHHHHHHHHcCCeee
Confidence 12467788899998544
No 287
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.34 E-value=0.0053 Score=59.95 Aligned_cols=53 Identities=6% Similarity=-0.069 Sum_probs=44.0
Q ss_pred eEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 118 KGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.+||+=+|||.|++-+.+ ..-+++.+|.++++++.-++|++. .+++++++.|.
T Consensus 94 ~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~ 146 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDG 146 (283)
T ss_dssp SSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCH
T ss_pred CceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcH
Confidence 589999999999877655 457899999999999999999864 35788888763
No 288
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.23 E-value=0.011 Score=56.14 Aligned_cols=46 Identities=22% Similarity=0.151 Sum_probs=37.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNP 163 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~ 163 (420)
...|||..||||-.+. ++...+.+++|+|+++.+++.|++|++.++
T Consensus 213 ~~~vlD~f~GsGtt~~--~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAI--VAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp TCEEEESSCTTCHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCEEEECCCCCCHHHH--HHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 3589999999998753 334457899999999999999999998763
No 289
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.34 E-value=0.03 Score=56.21 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=46.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...|||||.|.|.+...|+.+....+++++|+|+..+..-++.. .. ++++++.+|..
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~~----~~l~ii~~D~l 115 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-EG----SPLQILKRDPY 115 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-TT----SSCEEECSCTT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-cC----CCEEEEECCcc
Confidence 46899999999999888876554568999999999998887765 22 47899999854
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.16 E-value=0.049 Score=55.23 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=83.1
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC-C-CC----CCcEEEEEccCCCCCCcccccccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN-P-HI----SELIEIRKVDNSESTPSIQESLTG 189 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N-~-~l----~~rI~l~~~d~~~~~p~~~~~~~~ 189 (420)
+.+||=||-|.|.+.-.+.+ .+..+++.+|||++.+++|++-.... + .+ ..+++++.+|...
T Consensus 206 pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~----------- 273 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP----------- 273 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH-----------
T ss_pred CCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH-----------
Confidence 46899999999988766654 45578999999999999999854210 0 01 2357777766321
Q ss_pred CccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCCCCcEEEEEECCCcccCcccccCCCCcccCCC
Q 014664 190 KSVQDESNMDMSGHMDEEAEPSSSSSFNLPAGAQSSYHGPPVLVGVVRDGEQFDFCICNPPFFESMEEAGLNPKTSCGGT 269 (420)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~i~~~~~~FD~imcNPPF~~s~eea~~eP~~a~~G~ 269 (420)
.+.......++||+||.-.+=... ...|. +
T Consensus 274 -----------------------------------------fl~~~~~~~~~yDvIIvDl~D~~~----s~~p~-----g 303 (381)
T 3c6k_A 274 -----------------------------------------VLKRYAKEGREFDYVINDLTAVPI----STSPE-----E 303 (381)
T ss_dssp -----------------------------------------HHHHHHHHTCCEEEEEEECCSSCC----CCC--------
T ss_pred -----------------------------------------HHHhhhhccCceeEEEECCCCCcc----cCccc-----C
Confidence 122111234689999987531110 00010 1
Q ss_pred CCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc---CcHHHHHHHHHHc
Q 014664 270 PEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK---SNLKFLISKLRKV 320 (420)
Q Consensus 270 ~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~---~~l~~l~~~L~~~ 320 (420)
.. ...|.+.+.+...+.++++|.+.+--+-. ..+..+.+.|++.
T Consensus 304 ~a-------~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 304 DS-------TWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL 350 (381)
T ss_dssp -C-------HHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS
T ss_pred cc-------hHHHHHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHh
Confidence 11 45677778888888899999886544422 2334455566665
No 291
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.21 E-value=0.076 Score=52.39 Aligned_cols=43 Identities=19% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCe-eEEecCcHHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNVK 160 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~-vvavDIs~~AL~~A~~N~~ 160 (420)
+.+++|+.||+|.+. ++....+++ +.++|+|+.|++..+.|..
T Consensus 11 ~~~~~dLFaG~Gg~~--~g~~~aG~~~v~~~e~d~~a~~t~~~N~~ 54 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFR--LALESCGAECVYSNEWDKYAQEVYEMNFG 54 (327)
T ss_dssp TCEEEEETCTTTHHH--HHHHHTTCEEEEEECCCHHHHHHHHHHHS
T ss_pred CCcEEEECCCcCHHH--HHHHHCCCeEEEEEeCCHHHHHHHHHHcC
Confidence 478999999999774 555555765 7789999999999999964
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=93.70 E-value=0.084 Score=51.30 Aligned_cols=78 Identities=14% Similarity=0.010 Sum_probs=54.1
Q ss_pred CcHhHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhh-----cCCeeEEecCcH---------------
Q 014664 90 NRSNYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTD--------------- 149 (420)
Q Consensus 90 ~R~nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~-----~~~~vvavDIs~--------------- 149 (420)
.|...+..+...+... ..+..||++||..|.=++.++..+ ++-+++++|..+
T Consensus 89 ~r~~~L~~l~~~v~~~--------~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~ 160 (282)
T 2wk1_A 89 KRLENIRQCVEDVIGN--------NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRK 160 (282)
T ss_dssp HHHHHHHHHHHHHHHT--------TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhc--------CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccc
Confidence 4555555554444322 235689999999997555555443 367899999631
Q ss_pred -----------HHHHHHHHHHHHCCCC-CCcEEEEEccC
Q 014664 150 -----------VALEWAEKNVKSNPHI-SELIEIRKVDN 176 (420)
Q Consensus 150 -----------~AL~~A~~N~~~N~~l-~~rI~l~~~d~ 176 (420)
..++.|++|+++.+ + .++|++++++.
T Consensus 161 ~~~~~~~~~~~~~~~~ar~n~~~~g-l~~~~I~li~Gda 198 (282)
T 2wk1_A 161 MALHRRNSVLAVSEEEVRRNFRNYD-LLDEQVRFLPGWF 198 (282)
T ss_dssp HCGGGGHHHHCCCHHHHHHHHHHTT-CCSTTEEEEESCH
T ss_pred cccccccccchhHHHHHHHHHHHcC-CCcCceEEEEeCH
Confidence 14788999999985 7 48999999974
No 293
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=93.35 E-value=0.19 Score=50.91 Aligned_cols=61 Identities=11% Similarity=0.029 Sum_probs=48.0
Q ss_pred CCCeEEEECCchhHHHHHHHH-hhcC-CeeEEecCcHHHHHHHHHHHHH--CCCCCCcEEEEEcc
Q 014664 115 DKVKGFDIGTGANCIYPLLGA-SLLG-WSFVGSDMTDVALEWAEKNVKS--NPHISELIEIRKVD 175 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~-~~~~-~~vvavDIs~~AL~~A~~N~~~--N~~l~~rI~l~~~d 175 (420)
....++|||++.|.....++. ..+. .+|+|+|-+|.+++..++|++. |+.+..+|+++..-
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 346899999999988766663 3444 6999999999999999999998 54232688887654
No 294
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.67 E-value=0.35 Score=47.26 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=50.5
Q ss_pred CCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc--C--------
Q 014664 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK--S-------- 308 (420)
Q Consensus 239 ~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~--~-------- 308 (420)
+++||+|+|+|||...... .+. .... ..-+.++...++++..+++.+|.+...++.. .
T Consensus 31 ~~svDlI~tDPPY~~~~~~-~y~------~~~~-----~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~ 98 (323)
T 1boo_A 31 EESISLVMTSPPFALQRKK-EYG------NLEQ-----HEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIY 98 (323)
T ss_dssp SSCEEEEEECCCCSSSCSC-SSC------SCHH-----HHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCH
T ss_pred CCCeeEEEECCCCCCCccc-ccC------CcCH-----HHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccc
Confidence 5689999999999764321 110 0000 0124578888999999999999988888843 1
Q ss_pred cHHHHHHHHHHcCCceE
Q 014664 309 NLKFLISKLRKVGVTIV 325 (420)
Q Consensus 309 ~l~~l~~~L~~~g~~~v 325 (420)
.+..+...+++.|+..+
T Consensus 99 ~~~~i~~~~~~~Gf~~~ 115 (323)
T 1boo_A 99 NFRVLIRMIDEVGFFLA 115 (323)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHhCCCEEE
Confidence 35667777888887533
No 295
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=91.09 E-value=0.25 Score=48.86 Aligned_cols=43 Identities=16% Similarity=0.079 Sum_probs=34.4
Q ss_pred CCeEEEECCchhHHHHHHHHhhcC--C-eeEEecCcHHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLG--W-SFVGSDMTDVALEWAEKNVK 160 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~--~-~vvavDIs~~AL~~A~~N~~ 160 (420)
+.+++|+.||+|.+..-+. ..+ + .++++|+++.|++..+.|..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~--~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALR--ESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp CEEEEEETCTTCHHHHHHH--HHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHH--HCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 3589999999998765443 344 3 58999999999999999964
No 296
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=90.98 E-value=0.25 Score=49.42 Aligned_cols=55 Identities=15% Similarity=-0.048 Sum_probs=44.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh-cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
...++|..+|.|.-...|+.+. ++.+++|+|+|++|++.|+ ++ ..+++++++++.
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~~~Rv~lv~~nF 113 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----DDPRFSIIHGPF 113 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----CCTTEEEEESCG
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----cCCcEEEEeCCH
Confidence 3589999999998887777765 5679999999999999984 32 236899998864
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=90.25 E-value=1 Score=45.58 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=34.2
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..++||||+..|.-.-.|..+ +.+|+|+|+.+-. ..+..+ .+|++++.|.
T Consensus 212 G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-----~~l~~~----~~V~~~~~d~ 261 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-----QSLMDT----GQVTWLREDG 261 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-----HHHHTT----TCEEEECSCT
T ss_pred CCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-----hhhccC----CCeEEEeCcc
Confidence 468999999999876555543 6799999986421 122233 3688887764
No 298
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.99 E-value=0.38 Score=48.35 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=33.2
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCe-eEEecCcHHHHHHHHHHH
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~-vvavDIs~~AL~~A~~N~ 159 (420)
.+++|+.||+|.+. ++....+++ +.|+|+|+.|++..+.|.
T Consensus 3 ~~vidLFsG~GGls--lG~~~aG~~~v~avE~d~~a~~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLS--LGAARAGFDVKMAVEIDQHAINTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHH--HHHHHHTCEEEEEECSCHHHHHHHHHHC
T ss_pred CeEEEEccCcCHHH--HHHHHCCCcEEEEEeCCHHHHHHHHHhC
Confidence 57999999999775 555555775 569999999999998884
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=88.67 E-value=0.55 Score=46.31 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=34.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcC--Ce-e-EEecCcHHHHHHHHHHH
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLG--WS-F-VGSDMTDVALEWAEKNV 159 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~--~~-v-vavDIs~~AL~~A~~N~ 159 (420)
++.+++|+.||+|.+. ++.+..+ ++ + .|+|+|+.|++.-+.|.
T Consensus 9 ~~~~vidLFaG~GG~~--~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLR--SSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CCEEEEEETCTTTHHH--HHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCChhHHH--HHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 4579999999999774 5555555 35 4 59999999999999886
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.85 E-value=1.3 Score=41.62 Aligned_cols=72 Identities=17% Similarity=0.156 Sum_probs=47.9
Q ss_pred CCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHH
Q 014664 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLR 318 (420)
Q Consensus 239 ~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~ 318 (420)
+++||+|++.|||......-+ .+. +.+ .=+.|+...+++...+++..|.+...++ ......+...+.
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d-----~~~-~~~------~y~~~~~~~l~~~~~~Lk~~g~i~v~~~-d~~~~~~~~~~~ 87 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWD-----SFD-SHN------EFLAFTYRWIDKVLDKLDKDGSLYIFNT-PFNCAFICQYLV 87 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGG-----CCS-SHH------HHHHHHHHHHHHHHHHEEEEEEEEEEEC-HHHHHHHHHHHH
T ss_pred ccccCEEEECCCCCCCccccc-----ccC-CHH------HHHHHHHHHHHHHHHHhcCCeEEEEEcC-cHHHHHHHHHHH
Confidence 468999999999975421100 010 111 0245788888888889999998877765 444556677788
Q ss_pred HcCCc
Q 014664 319 KVGVT 323 (420)
Q Consensus 319 ~~g~~ 323 (420)
+.|+.
T Consensus 88 ~~gf~ 92 (260)
T 1g60_A 88 SKGMI 92 (260)
T ss_dssp HTTCE
T ss_pred hhccc
Confidence 88874
No 301
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.26 E-value=0.78 Score=44.73 Aligned_cols=45 Identities=18% Similarity=0.028 Sum_probs=37.5
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
...|||--||||-.+ +++...+.+++|+|+++.++++|+++++..
T Consensus 253 ~~~VlDpF~GsGtt~--~aa~~~gr~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 253 DDLVVDIFGGSNTTG--LVAERESRKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp TCEEEETTCTTCHHH--HHHHHTTCEEEEEESCHHHHHHHHGGGSCS
T ss_pred CCEEEECCCCCCHHH--HHHHHcCCCEEEEeCCHHHHHHHHHHHHhc
Confidence 458999999999764 444556889999999999999999998754
No 302
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=85.37 E-value=2.8 Score=42.30 Aligned_cols=21 Identities=14% Similarity=-0.168 Sum_probs=16.6
Q ss_pred CCeEEEECCchhHHHHHHHHh
Q 014664 116 KVKGFDIGTGANCIYPLLGAS 136 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~ 136 (420)
..+|+|+||++|.....+...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ 73 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRD 73 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCCchHHHHHHH
Confidence 579999999999876665543
No 303
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=85.19 E-value=1.2 Score=43.18 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=33.7
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCe---eEEecCcHHHHHHHHHHH
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWS---FVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~---vvavDIs~~AL~~A~~N~ 159 (420)
.+.+++|+.||+|.+. ++.+..+.+ +.++|+|+.|++.-+.|.
T Consensus 15 ~~~~vidLFaG~GG~~--~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGL--LVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCEEEEEETCTTTHHH--HHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccHHH--HHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 4579999999999775 454555554 589999999998887773
No 304
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.30 E-value=1.1 Score=43.74 Aligned_cols=46 Identities=11% Similarity=-0.027 Sum_probs=35.3
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH---HHHHHHHHHHHHCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD---VALEWAEKNVKSNP 163 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~---~AL~~A~~N~~~N~ 163 (420)
...|||--||||-.+ +++...+-+++|+|+++ ..+++|+++++..+
T Consensus 243 ~~~vlDpF~GsGtt~--~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 243 GSTVLDFFAGSGVTA--RVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TCEEEETTCTTCHHH--HHHHHHTCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCEEEecCCCCCHHH--HHHHHcCCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 458999999999764 44445578999999999 99999999987653
No 305
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=83.07 E-value=1.4 Score=43.43 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=32.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCC--e-eEEecCcHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGW--S-FVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~--~-vvavDIs~~AL~~A~~N~ 159 (420)
+.+++|+.||+|.+. ++.+..+. + +.|+|+|+.|++.-+.|.
T Consensus 3 ~~~~idLFaG~GG~~--~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 3 SHKILELYSGIGGMH--CAWKESGLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp CEEEEEETCTTTHHH--HHHHHHTCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CCEEEEECcCccHHH--HHHHHcCCCceEEEEEeCCHHHHHHHHHhC
Confidence 468999999999775 44444453 4 679999999999888885
No 306
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=82.67 E-value=2 Score=44.73 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=35.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCe-eEEecCcHHHHHHHHHHH
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~-vvavDIs~~AL~~A~~N~ 159 (420)
...+++|+.||+|.+ .++.+..+++ +.|+|+|+.|++.-+.|.
T Consensus 87 ~~~~viDLFaG~GGl--slG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 87 YAFRFIDLFAGIGGI--RRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp CSEEEEEESCTTSHH--HHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred ccceEEEecCCccHH--HHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 457999999999976 4665656665 789999999999888875
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=79.24 E-value=1.6 Score=42.00 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=32.0
Q ss_pred eEEEECCchhHHHHHHHHhhcCCe-eEEecCcHHHHHHHHHH
Q 014664 118 KGFDIGTGANCIYPLLGASLLGWS-FVGSDMTDVALEWAEKN 158 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~~~~~-vvavDIs~~AL~~A~~N 158 (420)
++||+-||+|.+ .++.+..+++ +.|+|+|+.|++.-+.|
T Consensus 2 kvidLFsG~GG~--~~G~~~aG~~~v~a~e~d~~a~~ty~~N 41 (331)
T 3ubt_Y 2 NLISLFSGAGGL--DLGFQKAGFRIICANEYDKSIWKTYESN 41 (331)
T ss_dssp EEEEESCTTCHH--HHHHHHTTCEEEEEEECCTTTHHHHHHH
T ss_pred eEEEeCcCccHH--HHHHHHCCCEEEEEEeCCHHHHHHHHHH
Confidence 699999999976 5666666776 56999999999888777
No 308
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=76.52 E-value=13 Score=36.14 Aligned_cols=70 Identities=14% Similarity=0.278 Sum_probs=48.9
Q ss_pred CCcEEEEEECCCcccCcccccCCCCcccCCCCCcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCc-------CcHH
Q 014664 239 GEQFDFCICNPPFFESMEEAGLNPKTSCGGTPEEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRK-------SNLK 311 (420)
Q Consensus 239 ~~~FD~imcNPPF~~s~eea~~eP~~a~~G~~~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~-------~~l~ 311 (420)
+++||+|++=|||....+. . .... .-+.++...+.++..+++.+|.+..+++.. ..+.
T Consensus 56 ~~svDlI~tDPPY~~~~d~--~------~~~~-------~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l~ 120 (319)
T 1eg2_A 56 DDSVQLIICDPPYNIMLAD--W------DDHM-------DYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLI 120 (319)
T ss_dssp TTCEEEEEECCCSBCCGGG--G------GTCS-------SHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHH
T ss_pred cCCcCEEEECCCCCCCCCC--c------cCHH-------HHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccccccHH
Confidence 4689999999999754211 0 0011 136688888899889999999988888854 2347
Q ss_pred HHHHHHHHcC-Cc
Q 014664 312 FLISKLRKVG-VT 323 (420)
Q Consensus 312 ~l~~~L~~~g-~~ 323 (420)
.+...+...| +.
T Consensus 121 ~l~~~i~~~G~~~ 133 (319)
T 1eg2_A 121 SIISHMRQNSKML 133 (319)
T ss_dssp HHHHHHHHHCCCE
T ss_pred HHHHHHhCcccce
Confidence 7777777776 54
No 309
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=65.39 E-value=7.3 Score=44.05 Aligned_cols=43 Identities=21% Similarity=0.174 Sum_probs=34.7
Q ss_pred CCCCeEEEECCchhHHHHHHHHhhcCC--eeEEecCcHHHHHHHHHH
Q 014664 114 GDKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 114 ~~~~~vLDIGTGsG~I~~~La~~~~~~--~vvavDIs~~AL~~A~~N 158 (420)
..+.++|||-||+|.+ .++.+..++ .+.|+||++.|++.-+.|
T Consensus 538 ~~~l~~iDLFaG~GGl--slGl~~AG~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGL--SEGFHQAGISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CCCEEEEEESCTTSHH--HHHHHHHTSEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCeEEEeccCccHH--HHHHHHCCCCceEEEEECCHHHHHHHHHh
Confidence 3457999999999976 566666676 477999999999888777
No 310
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=61.63 E-value=4.3 Score=39.39 Aligned_cols=34 Identities=9% Similarity=-0.136 Sum_probs=24.2
Q ss_pred CeEEEECCchhHHHHHHHHhhcCCeeEEecCcHH
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDV 150 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~ 150 (420)
.+|||||||.|.-.-.++.+.+-..++|+|+...
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ 125 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC
Confidence 4899999999976543443444457889999754
No 311
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=61.46 E-value=9.8 Score=35.86 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=41.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=-|.++| |+..++.++ .+++|+.+|++++.++-+.+.+...+ .++..+..|..
T Consensus 10 KvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~ 68 (255)
T 4g81_D 10 KTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVT 68 (255)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC
Confidence 45666676655 777777665 47999999999999988877777653 35777777753
No 312
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=61.15 E-value=4.5 Score=39.19 Aligned_cols=44 Identities=5% Similarity=-0.115 Sum_probs=29.1
Q ss_pred HHHHHHHhhcCC-eEEEEEeCC--cCcHHHHHHHHHHcCCceEEEEEe
Q 014664 286 IIEDSVALKQTF-RWYTSMVGR--KSNLKFLISKLRKVGVTIVKTTEF 330 (420)
Q Consensus 286 iI~eS~~l~~~~-~w~tsmvgk--~~~l~~l~~~L~~~g~~~v~~~e~ 330 (420)
+++.+..+++++ |+|.+=+=. -.....+.+.|++. |..|++.+-
T Consensus 165 LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~-F~~V~~~KP 211 (277)
T 3evf_A 165 VLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRR-FGGTVIRNP 211 (277)
T ss_dssp HHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH-HCCEEECCT
T ss_pred HHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHh-cCCEEEEeC
Confidence 467777888888 988765544 34556677777664 455666554
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=60.39 E-value=10 Score=38.40 Aligned_cols=45 Identities=13% Similarity=-0.004 Sum_probs=33.3
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCC---eeEEecCcHHHHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVK 160 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~---~vvavDIs~~AL~~A~~N~~ 160 (420)
..+++|+.||.|.....|-..- ... .+.++|+|+.|++.-+.|-.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 4799999999998765553321 111 27789999999998888864
No 314
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=60.32 E-value=16 Score=36.56 Aligned_cols=48 Identities=8% Similarity=-0.054 Sum_probs=30.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
...+|+|+|||+|.....+... +++..++.....+.-...+++...|.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~--------------ii~~i~~~~~~~~~~~pe~~v~~nDL 99 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDF--------------IVKHISKRFDAAGIDPPEFTAFFSDL 99 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHH--------------HHHHHHHHHHHTTCCCCCEEEEEEEC
T ss_pred CceEEEecCCCCChhHHHHHHH--------------HHHHHHHHHhhcCCCCCceeEEecCC
Confidence 3579999999999887666543 44444444333221123588888775
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=56.40 E-value=15 Score=36.10 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=29.7
Q ss_pred CCeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHH
Q 014664 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (420)
Q Consensus 116 ~~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~ 156 (420)
..+||-+|+|. |.+++.++.. .++ +|+++|.+++.++.|+
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHH
Confidence 35789999865 5555555544 567 8999999999888875
No 316
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=54.63 E-value=17 Score=33.50 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=41.1
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++ .|+..++.++ .+++|+++|.+++.++.+.+.+.... ....+.++..|..
T Consensus 11 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~ 71 (267)
T 3t4x_A 11 KTALVTGSTA-GIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPVVADLG 71 (267)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC-TTCEEEEEECCTT
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCceEEEEecCCC
Confidence 4677677554 4777777655 47999999999998887766665432 2346777777753
No 317
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=54.58 E-value=21 Score=33.54 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=42.1
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCC---eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGW---SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~---~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .++ +|+.++.+++.++.+.+.+.... -..++.++..|..
T Consensus 34 k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~ 97 (287)
T 3rku_A 34 KTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF-PNAKVHVAQLDIT 97 (287)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC-TTCEEEEEECCTT
T ss_pred CEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC-CCCeEEEEECCCC
Confidence 46787887655 777777654 234 99999999999888777765531 2346888888864
No 318
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=53.46 E-value=22 Score=34.45 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=29.7
Q ss_pred CCeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
..+||-+|+|. |..+..++. ..++ +|+++|.+++.++.|++
T Consensus 191 g~~VlV~GaG~vG~~a~qlak-~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAK-VCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHH-HHTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH-HcCCCeEEEECCCHHHHHHHHH
Confidence 35799999875 444444444 3566 69999999999998864
No 319
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=52.17 E-value=24 Score=33.67 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=30.7
Q ss_pred CCeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..++|=+|+|. |..++.++....+.+|+++|.+++-++.|++
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 34788888765 4444555555557899999999999988864
No 320
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=51.63 E-value=58 Score=30.44 Aligned_cols=57 Identities=14% Similarity=0.064 Sum_probs=43.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=-|.++| |+..++.++ .+++|+.+|++++.++.+.+.++..+ .++..+..|..
T Consensus 8 KvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt 66 (254)
T 4fn4_A 8 KVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVS 66 (254)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCC
Confidence 46676787666 777776654 47999999999999998888887653 46888888864
No 321
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=50.91 E-value=14 Score=36.10 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=24.6
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcH
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~ 149 (420)
..+||||||+.|.-.-.++.+.+-..++|+|+..
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 4689999999998755554433334788999964
No 322
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=50.80 E-value=2.3 Score=42.58 Aligned_cols=17 Identities=12% Similarity=0.049 Sum_probs=13.4
Q ss_pred CCCeEEEECCchhHHHH
Q 014664 115 DKVKGFDIGTGANCIYP 131 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~ 131 (420)
...+|+|+||++|.-..
T Consensus 51 ~~~~IaDlGCs~G~Nt~ 67 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNAL 67 (359)
T ss_dssp SEECCEEESCCSSTTTT
T ss_pred CceEEEecCCCCCcchH
Confidence 35789999999996543
No 323
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=49.40 E-value=7.4 Score=38.31 Aligned_cols=32 Identities=19% Similarity=0.043 Sum_probs=23.5
Q ss_pred CeEEEECCchhHHHHHHHHhhcCC-eeEEecCcH
Q 014664 117 VKGFDIGTGANCIYPLLGASLLGW-SFVGSDMTD 149 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~~~~-~vvavDIs~ 149 (420)
..||||||+.|.-.- .++...+. .|+|+|+-.
T Consensus 96 ~~VlDLGaapGGwsq-~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCY-YMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp EEEEEETCTTCHHHH-HHTTCTTEEEEEEECCCS
T ss_pred CEEEEeCCCCCcHHH-HHHhhcCCCEEEEEEcCC
Confidence 489999999997643 33444444 699999964
No 324
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=48.88 E-value=9.6 Score=36.54 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=33.6
Q ss_pred CCCCCcHhHH-HHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcC-CeeEEecCcH
Q 014664 86 PTVPNRSNYI-HWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLG-WSFVGSDMTD 149 (420)
Q Consensus 86 PrvP~R~nyi-~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~-~~vvavDIs~ 149 (420)
.-...|.-|= .||.+-. .+. ....|+||||+.|.-.-..+ ...+ .+|+|+|+-.
T Consensus 57 g~yrSRa~~KL~ei~ek~---~l~------~g~~VvDLGaapGGWSq~~a-~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN---MVI------PEGRVIDLGCGRGGWSYYCA-GLKKVTEVRGYTKGG 112 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT---SSC------CCEEEEEESCTTSHHHHHHH-TSTTEEEEEEECCCS
T ss_pred CCccchHHHHHHHHHHhc---CCC------CCCEEEEcCCCCCcHHHHHH-HhcCCCEEEEEecCC
Confidence 4446788773 3444332 121 23489999999998654333 3444 4799999964
No 325
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=48.48 E-value=60 Score=29.35 Aligned_cols=58 Identities=16% Similarity=0.017 Sum_probs=42.3
Q ss_pred CeEEEECC-chhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGT-GANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGT-GsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|. |+| |+..++.++ .+++|+.+|.+++.++.+.+.++..+ ..++.++..|..
T Consensus 23 k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~ 83 (266)
T 3o38_A 23 KVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVT 83 (266)
T ss_dssp CEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTT
T ss_pred CEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCC
Confidence 45666665 555 677776654 47999999999999888877775542 357999998864
No 326
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=48.46 E-value=21 Score=41.65 Aligned_cols=42 Identities=21% Similarity=0.213 Sum_probs=34.3
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcCC--eeEEecCcHHHHHHHHHH
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLGW--SFVGSDMTDVALEWAEKN 158 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~~--~vvavDIs~~AL~~A~~N 158 (420)
...++|||-||+|.+ .+|.+..++ .+.|+|+++.|++.-+.|
T Consensus 850 ~~l~viDLFsG~GGl--slGfe~AG~~~vv~avEid~~A~~ty~~N 893 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGL--SEGFHQAGISETLWAIEMWDPAAQAFRLN 893 (1330)
T ss_dssp CCEEEEEETCTTSHH--HHHHHHTTSEEEEEEECCSHHHHHHHHHH
T ss_pred CCceEEecccCccHH--HHHHHHCCCCceEEEEECCHHHHHHHHHh
Confidence 457899999999976 566666676 478999999999987777
No 327
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=47.54 E-value=58 Score=30.88 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=44.6
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+.+...+ ...++.++..|..
T Consensus 9 k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~ 69 (319)
T 3ioy_A 9 RTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG-SGPEVMGVQLDVA 69 (319)
T ss_dssp CEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEECCTT
T ss_pred CEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCCeEEEEECCCC
Confidence 46787887655 777777665 47999999999999888877776543 3347888888864
No 328
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=46.74 E-value=82 Score=29.84 Aligned_cols=74 Identities=12% Similarity=0.083 Sum_probs=44.2
Q ss_pred EEEecCCceeCCCCCcHhHHHHH---------HHHHccCCCCCCCCCCCCCeEEEECCch-hHHHHHHHHhhcCCeeEEe
Q 014664 76 NWWIPDGQLCPTVPNRSNYIHWI---------EDLLSSNIIPTTSRNGDKVKGFDIGTGA-NCIYPLLGASLLGWSFVGS 145 (420)
Q Consensus 76 ~~~vp~g~LiPrvP~R~nyi~wi---------~dll~~~~~~~~~~~~~~~~vLDIGTGs-G~I~~~La~~~~~~~vvav 145 (420)
.+.+|+..++|- |.-..+.+.. ...+....+ ....+||-+|+|. |..+..++. ..+++|+++
T Consensus 125 y~~v~~~~~~~i-P~~~~~~~aa~l~~~~~ta~~~l~~~~~------~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~ 196 (340)
T 3s2e_A 125 YVVADPNYVGLL-PDKVGFVEIAPILCAGVTVYKGLKVTDT------RPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAV 196 (340)
T ss_dssp EEEECTTTSEEC-CTTSCHHHHGGGGTHHHHHHHHHHTTTC------CTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEE
T ss_pred EEEechHHEEEC-CCCCCHHHhhcccchhHHHHHHHHHcCC------CCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEE
Confidence 467888888876 4444433211 011221111 1234677788865 544444544 457899999
Q ss_pred cCcHHHHHHHHH
Q 014664 146 DMTDVALEWAEK 157 (420)
Q Consensus 146 DIs~~AL~~A~~ 157 (420)
|.+++.++.|++
T Consensus 197 ~~~~~~~~~~~~ 208 (340)
T 3s2e_A 197 DIDDAKLNLARR 208 (340)
T ss_dssp ESCHHHHHHHHH
T ss_pred eCCHHHHHHHHH
Confidence 999999988754
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=46.26 E-value=33 Score=33.55 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=28.3
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
.+||-+|+|. |.+++.++. ..++ +|+++|.+++.++.|++
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk-~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASAR-LLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHH-HCCCCeEEEEcCCHHHHHHHHH
Confidence 4788888754 444444444 3566 79999999999988853
No 330
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=45.96 E-value=64 Score=29.50 Aligned_cols=59 Identities=15% Similarity=0.016 Sum_probs=43.6
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|++++.+++.++-+.+.+...+ ..++.++..|..
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~ 72 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN--HENVVFHQLDVT 72 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCSEEEEECCTT
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CCceEEEEccCC
Confidence 346777776654 777777655 47999999999998888777776542 347889888864
No 331
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.89 E-value=81 Score=28.16 Aligned_cols=58 Identities=24% Similarity=0.209 Sum_probs=43.7
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.+.| |+..++.++ .+++|+++|.+++.++.+.+.++..+ .++.++..|..
T Consensus 9 ~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 68 (253)
T 3qiv_A 9 NKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVS 68 (253)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCC
Confidence 346777886554 777777665 47899999999999988877776542 46888888864
No 332
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.38 E-value=92 Score=28.29 Aligned_cols=58 Identities=19% Similarity=0.019 Sum_probs=44.0
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+...+ .++.++..|..
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 70 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDIT 70 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 346888887766 677776654 47999999999999888877776643 46888888864
No 333
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=44.96 E-value=49 Score=30.08 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=43.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.++..+ .++.++..|..
T Consensus 8 k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 66 (252)
T 3h7a_A 8 ATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDAR 66 (252)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCC
Confidence 46777887765 777777654 47999999999998888877777653 47888888864
No 334
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=44.60 E-value=1.8e+02 Score=28.27 Aligned_cols=57 Identities=16% Similarity=0.103 Sum_probs=34.4
Q ss_pred CcccccCchHHHHHHHHHHHHHhhcCCeEEEEEeCCcCcHHHHHHHHHHcCCceEEEEEecCCCeeeEEEE
Q 014664 271 EEMVCSGGERAFITRIIEDSVALKQTFRWYTSMVGRKSNLKFLISKLRKVGVTIVKTTEFVQGQTCRWGLA 341 (420)
Q Consensus 271 ~Em~~~GGel~Fv~riI~eS~~l~~~~~w~tsmvgk~~~l~~l~~~L~~~g~~~v~~~e~~qG~t~Rw~lA 341 (420)
-|||++ ++. +.-..+..++|.+++ .+....|...|.+.||+ |..+.= -|+++-..+|
T Consensus 201 PeLWs~----e~f----~~l~~~~~pgg~laT----Ytaag~VRR~L~~aGF~-V~k~~G-~g~KReml~A 257 (308)
T 3vyw_A 201 PELWTL----DFL----SLIKERIDEKGYWVS----YSSSLSVRKSLLTLGFK-VGSSRE-IGRKRKGTVA 257 (308)
T ss_dssp GGGGSH----HHH----HHHHTTEEEEEEEEE----SCCCHHHHHHHHHTTCE-EEEEEC-C---CEEEEE
T ss_pred cccCCH----HHH----HHHHHHhCCCcEEEE----EeCcHHHHHHHHHCCCE-EEecCC-CCCCCceeEE
Confidence 368874 334 444556777776544 45567899999999997 444442 2554455555
No 335
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=44.48 E-value=86 Score=29.26 Aligned_cols=58 Identities=19% Similarity=0.046 Sum_probs=44.2
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 31 gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 90 (301)
T 3tjr_A 31 GRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVR 90 (301)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCC
Confidence 346787887765 777777655 47999999999999988877776643 46888888864
No 336
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=43.85 E-value=55 Score=35.81 Aligned_cols=91 Identities=12% Similarity=0.027 Sum_probs=50.3
Q ss_pred ccccCCCHHHHHHHHHHH--hhhcCCcE-EEecCCceeCCC------CCcH-----hHHHHHHHHHccCCCCCCCCCCCC
Q 014664 51 PRIDWTDFNATRELTRVL--LLHDHGLN-WWIPDGQLCPTV------PNRS-----NYIHWIEDLLSSNIIPTTSRNGDK 116 (420)
Q Consensus 51 ~~IDf~d~~a~r~Lt~aL--L~~ffgl~-~~vp~g~LiPrv------P~R~-----nyi~wi~dll~~~~~~~~~~~~~~ 116 (420)
.-+||++|++...+...+ +...||++ |++.-+.=+..+ |++. +|+.=+-+++.... ...+
T Consensus 447 ~vLD~tnPevr~~i~~~l~~ll~~~GIDy~K~D~nr~i~~~~~~~~~~~~q~~~~~~y~~g~y~ll~~l~------~~~P 520 (745)
T 3mi6_A 447 FVLDMARPEVVDYLFKLMSQMIESANLDYIKWDMNRYATEMFSSRLTSDQQLELPHRYILGVYQLYARLT------QAYP 520 (745)
T ss_dssp EEBCTTCHHHHHHHHHHHHHHHHHHTCSEEEECCCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHH------HHCT
T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCcccCCCcCccccccHHHHHHHHHHHHHHHHHH------hhCC
Confidence 459999999999998887 35578885 555554433221 2232 34443333332210 0123
Q ss_pred CeEEEECCchhH-HHHHHHHhhcCCeeEEecCcH
Q 014664 117 VKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTD 149 (420)
Q Consensus 117 ~~vLDIGTGsG~-I~~~La~~~~~~~vvavDIs~ 149 (420)
..+++-|+|-|. +=+-+....+ ++.++|-+.
T Consensus 521 ~v~ie~CssGGgR~D~g~L~~~~--~~W~SD~tD 552 (745)
T 3mi6_A 521 NVLFESCASGGGRFDLGMMYYAP--QAWTSDDTD 552 (745)
T ss_dssp TCEEEECSTTTSSCSHHHHHHSS--EEECCSCCC
T ss_pred CeEEEecCCCCCccChhHHhcCC--ccccCCCCC
Confidence 467888777664 3222333333 566787754
No 337
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=43.37 E-value=76 Score=29.45 Aligned_cols=57 Identities=11% Similarity=0.056 Sum_probs=40.6
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEec-CcHHHHHHHHHHHH-HCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavD-Is~~AL~~A~~N~~-~N~~l~~rI~l~~~d~~ 177 (420)
..+|=.|.++ .|+..++.++ .+++|++++ .+++.++.+.+.+. ..+ .++.++..|..
T Consensus 10 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~ 70 (291)
T 1e7w_A 10 PVALVTGAAK-RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP---NSAITVQADLS 70 (291)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCCS
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC---CeeEEEEeecC
Confidence 3566666654 4777777665 478999999 99988887766665 332 46888888864
No 338
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=43.04 E-value=96 Score=28.38 Aligned_cols=60 Identities=18% Similarity=0.055 Sum_probs=43.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+.| |+..++.++ .+++|+.+|.+++.++.+.+.++..+.-..++.++..|..
T Consensus 12 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~ 73 (281)
T 3svt_A 12 RTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73 (281)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC
Confidence 46777786654 777777654 4799999999999988887777654311237888888864
No 339
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=42.23 E-value=42 Score=30.02 Aligned_cols=56 Identities=14% Similarity=0.123 Sum_probs=39.1
Q ss_pred CCCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 115 DKVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...++|=.|.++| |+..++.++ .+++|++++.+++.++...+.+ ..++.++..|..
T Consensus 13 ~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 70 (249)
T 3f9i_A 13 TGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL------KDNYTIEVCNLA 70 (249)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CSSEEEEECCTT
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------ccCccEEEcCCC
Confidence 3457887777655 777777654 4799999999998877654433 235777777753
No 340
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=42.12 E-value=83 Score=28.51 Aligned_cols=57 Identities=19% Similarity=0.091 Sum_probs=43.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++ .|+..++.++ .+++|++++.+++.++...+.+...+ .++.++..|..
T Consensus 30 k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 88 (262)
T 3rkr_A 30 QVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLS 88 (262)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCC
Confidence 4677777654 4787777665 47899999999999888877776653 46888888864
No 341
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=41.88 E-value=44 Score=31.95 Aligned_cols=41 Identities=20% Similarity=0.356 Sum_probs=29.2
Q ss_pred CCeEEEECCchhHHHH---HHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYP---LLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~---~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..++|-+|+|+| |+. .++...++++|+++|.+++.++.+++
T Consensus 171 g~~vlV~Gagg~-iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 171 TKTLLVVGAGGG-LGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCcc-HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 357999998744 333 33333338899999999999888754
No 342
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=41.30 E-value=16 Score=39.52 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=32.2
Q ss_pred CCCeEEEECCchhHHHHHHHHhhcC------C-eeEEecCcHHHHHHHHHHH
Q 014664 115 DKVKGFDIGTGANCIYPLLGASLLG------W-SFVGSDMTDVALEWAEKNV 159 (420)
Q Consensus 115 ~~~~vLDIGTGsG~I~~~La~~~~~------~-~vvavDIs~~AL~~A~~N~ 159 (420)
++.++|||=||+|.+. ++.+..+ . -+.|+|+|+.|++.=+.|-
T Consensus 211 k~ltvIDLFAG~GGls--~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMS--TGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHH--HHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHH--HHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4578999999999764 4433322 2 4679999999999888873
No 343
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=41.29 E-value=44 Score=32.61 Aligned_cols=46 Identities=17% Similarity=0.253 Sum_probs=35.9
Q ss_pred CCeEEEECCchhHHHHHHHHhhcCCeeEEecCcHHHHHHHHHHHHHC
Q 014664 116 KVKGFDIGTGANCIYPLLGASLLGWSFVGSDMTDVALEWAEKNVKSN 162 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~N~~~N 162 (420)
...|+.||||....+--|....++.+++-+|. |+.++.-++-+..+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~ 143 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRES 143 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHS
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhc
Confidence 46899999999988777765545666777777 89998888887765
No 344
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=40.93 E-value=49 Score=33.26 Aligned_cols=53 Identities=13% Similarity=0.080 Sum_probs=35.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh-------cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE
Q 014664 116 KVKGFDIGTGANCIYPLLGASL-------LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR 172 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~-------~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~ 172 (420)
+..++++|.|.|-+..-+...+ ...+++.||+|+...+.=++.++.. ++|.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~----~~v~W~ 140 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI----RNIHWH 140 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC----SSEEEE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC----CCeEEe
Confidence 5689999999998765554322 2348999999998776444443321 257665
No 345
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=40.80 E-value=45 Score=29.91 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=35.5
Q ss_pred hHHHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhcCCeeEEecC
Q 014664 93 NYIHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLLGWSFVGSDM 147 (420)
Q Consensus 93 nyi~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~~~~vvavDI 147 (420)
+.+.|+.+.... -..-|||||-|.|=-|--|-..+|+-++++.|-
T Consensus 28 ~~L~~a~~~v~~----------~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 28 ACLEHAIAQTAG----------LSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHTTT----------CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHhcC----------CCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 456677777653 234699999999999999988888888888875
No 346
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=40.28 E-value=41 Score=31.88 Aligned_cols=55 Identities=11% Similarity=-0.057 Sum_probs=38.9
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...+|=-|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+ ..++..+..|..
T Consensus 29 gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~------g~~~~~~~~Dv~ 85 (273)
T 4fgs_A 29 AKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI------GGGAVGIQADSA 85 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTCEEEECCTT
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCCeEEEEecCC
Confidence 346777787776 777777665 4799999999999888665443 234667777754
No 347
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=40.16 E-value=29 Score=31.36 Aligned_cols=59 Identities=10% Similarity=-0.116 Sum_probs=40.1
Q ss_pred CCCeEEEECCc-hhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 115 DKVKGFDIGTG-ANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 115 ~~~~vLDIGTG-sG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...++|=.|.+ +|.|+..++.++ .+++|+.++.+....+.+++-.+..+ .+.++..|..
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~ 74 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVA 74 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCC
Confidence 34578888874 355787777655 47899999998766666555555543 3677777754
No 348
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=39.98 E-value=95 Score=27.58 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh---cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL---LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~---~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.| |+|.|+..++..+ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 5 k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~ 64 (276)
T 1wma_A 5 HVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDID 64 (276)
T ss_dssp CEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCC
Confidence 4566666 4566887777654 57899999999988877777766542 46888888864
No 349
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=39.84 E-value=1e+02 Score=27.93 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=42.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.++..+ .++.++..|..
T Consensus 13 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 71 (256)
T 3gaf_A 13 AVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVT 71 (256)
T ss_dssp CEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 46777776655 777777654 47999999999998888777776542 46888888864
No 350
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=39.80 E-value=92 Score=28.65 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=42.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+-++..+ .++.++..|..
T Consensus 5 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 63 (264)
T 3tfo_A 5 KVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVT 63 (264)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 35666776654 777777655 47999999999999888877776643 46788888764
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=39.52 E-value=51 Score=31.24 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=29.5
Q ss_pred CeEEEECCchhH-HHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGANC-IYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGsG~-I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
.++|=+|+|++. ++..+++...+.+|+++|.+++-++.|++
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 467778887654 33444545568899999999998877754
No 352
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.07 E-value=1e+02 Score=28.47 Aligned_cols=57 Identities=16% Similarity=0.060 Sum_probs=42.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+... ..++.++..|..
T Consensus 29 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~ 87 (283)
T 3v8b_A 29 PVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGA---GGQAIALEADVS 87 (283)
T ss_dssp CEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT---TCCEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 46777887665 777777655 4799999999999888777766543 356888888864
No 353
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=38.85 E-value=93 Score=29.58 Aligned_cols=57 Identities=9% Similarity=0.014 Sum_probs=40.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEec-CcHHHHHHHHHHHH-HCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSD-MTDVALEWAEKNVK-SNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavD-Is~~AL~~A~~N~~-~N~~l~~rI~l~~~d~~ 177 (420)
..+|=.|.+. .|+..++.++ .+++|++++ .+++.++.+.+.+. .. ..++.++..|..
T Consensus 47 k~~lVTGas~-GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~ 107 (328)
T 2qhx_A 47 PVALVTGAAK-RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR---PNSAITVQADLS 107 (328)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS---TTCEEEEECCCS
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc---CCeEEEEEeeCC
Confidence 3566666554 5787777665 479999999 99988887766665 33 246888888864
No 354
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=38.57 E-value=75 Score=28.76 Aligned_cols=57 Identities=16% Similarity=0.019 Sum_probs=42.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|+++|.+++.++.+.+.++.. ..++.++..|..
T Consensus 7 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 65 (257)
T 3imf_A 7 KVVIITGGSS-GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF---PGQILTVQMDVR 65 (257)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS---TTCEEEEECCTT
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 4566667554 4777777655 4789999999999988877766543 357888888864
No 355
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=38.54 E-value=1.3e+02 Score=27.22 Aligned_cols=59 Identities=20% Similarity=0.116 Sum_probs=42.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++..+ .+++|++++.++..++...+.++..+ ...++.++..|..
T Consensus 33 k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 33 RLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG-YPGTLIPYRCDLS 93 (279)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CSSEEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC-CCceEEEEEecCC
Confidence 467777755 45777777654 47899999999988877666666542 4456888888864
No 356
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.45 E-value=1.2e+02 Score=27.96 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=42.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+.+... ..++.++..|..
T Consensus 25 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dv~ 83 (279)
T 3sju_A 25 QTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---GHDVDGSSCDVT 83 (279)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 46788886655 777777654 4799999999999888877777654 246888888864
No 357
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=37.20 E-value=1.2e+02 Score=26.85 Aligned_cols=57 Identities=18% Similarity=0.073 Sum_probs=42.1
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.....++..+ .++.++..|..
T Consensus 6 k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 64 (247)
T 3lyl_A 6 KVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNIS 64 (247)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCC
Confidence 4677677554 4777777654 47999999999998888777776653 46888888864
No 358
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=37.20 E-value=1.5e+02 Score=26.91 Aligned_cols=59 Identities=15% Similarity=0.014 Sum_probs=43.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHH-CCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKS-NPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~-N~~l~~rI~l~~~d~~ 177 (420)
...+|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+.. .+ ..++.++..|..
T Consensus 8 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~ 69 (265)
T 3lf2_A 8 EAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP--GARLFASVCDVL 69 (265)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCC
Confidence 346777887765 777777654 478999999999998887777765 32 235888888864
No 359
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=36.20 E-value=52 Score=32.04 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=30.9
Q ss_pred CeEEEECCchhHHHHHHHH--hhcCCeeEEecCcHHHHHHHHHHHHH
Q 014664 117 VKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAEKNVKS 161 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~--~~~~~~vvavDIs~~AL~~A~~N~~~ 161 (420)
.+|.=||+|. ++.-+|. ...++.|+..|+++++++-|.++++.
T Consensus 7 ~~VaViGaG~--MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 7 GDVLIVGSGL--VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHH
T ss_pred CeEEEECCcH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHH
Confidence 4677777764 3333322 34689999999999999998888754
No 360
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=36.06 E-value=1.5e+02 Score=26.18 Aligned_cols=57 Identities=12% Similarity=0.055 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.++..++...+.++..+ .++.++..|..
T Consensus 14 k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 72 (260)
T 3awd_A 14 RVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG---HDVSSVVMDVT 72 (260)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCC
Confidence 467777755 45787777655 47899999999988776666665432 46888888864
No 361
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.86 E-value=1.5e+02 Score=26.90 Aligned_cols=57 Identities=23% Similarity=0.104 Sum_probs=41.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++..+ .+++|+++|.+++.++...+.++..+ .++.++..|..
T Consensus 32 k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~ 90 (272)
T 1yb1_A 32 EIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG---AKVHTFVVDCS 90 (272)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC---CeEEEEEeeCC
Confidence 467777755 45787777655 47899999999988877766666542 46888888864
No 362
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=35.66 E-value=1.3e+02 Score=27.17 Aligned_cols=61 Identities=16% Similarity=0.116 Sum_probs=43.0
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+.++.+++.++.+.+.+.....-..++.++..|..
T Consensus 7 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 69 (250)
T 3nyw_A 7 KGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69 (250)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCC
Confidence 346777787765 777776654 4799999999999888777766543111246788888864
No 363
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=35.50 E-value=62 Score=29.87 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=38.7
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+. +..++.++..|..
T Consensus 16 gk~vlVTGas~g-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dl~ 72 (291)
T 3rd5_A 16 QRTVVITGANSG-LGAVTARELARRGATVIMAVRDTRKGEAAART------MAGQVEVRELDLQ 72 (291)
T ss_dssp TCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------SSSEEEEEECCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------hcCCeeEEEcCCC
Confidence 346777776654 777777655 478999999998876644322 3457888888864
No 364
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=35.12 E-value=1.5e+02 Score=27.03 Aligned_cols=57 Identities=14% Similarity=0.035 Sum_probs=41.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 23 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 81 (277)
T 2rhc_B 23 EVALVTGATS-GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG---VEADGRTCDVR 81 (277)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 4678788665 4777776654 47899999999988877666665532 46888888864
No 365
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=34.98 E-value=1.6e+02 Score=26.23 Aligned_cols=57 Identities=11% Similarity=0.042 Sum_probs=41.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 8 k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 66 (247)
T 2jah_A 8 KVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG---AKVHVLELDVA 66 (247)
T ss_dssp CEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 46777786654 777777654 47899999999988887766665432 46888888864
No 366
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.89 E-value=1e+02 Score=27.28 Aligned_cols=57 Identities=16% Similarity=0.053 Sum_probs=40.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|. +|.|+..++.++ .+++|+++|.+++.++...+.++..+ .++.++..|..
T Consensus 12 ~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 70 (255)
T 1fmc_A 12 KCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG---GQAFACRCDIT 70 (255)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC---CceEEEEcCCC
Confidence 45666664 456888877665 47899999999988876666665432 46888888764
No 367
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.47 E-value=1.6e+02 Score=26.62 Aligned_cols=58 Identities=17% Similarity=0.027 Sum_probs=42.4
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+.+|.+ .+.++.+...+... ..++.++..|..
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~ 81 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT---GRKAYTAEVDVR 81 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT---TSCEEEEECCTT
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc---CCceEEEEccCC
Confidence 346787887665 777777655 47999999987 77777777666654 257888888864
No 368
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=34.15 E-value=1.6e+02 Score=27.31 Aligned_cols=58 Identities=17% Similarity=0.097 Sum_probs=42.0
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...+|=.|.++| |+..++.++ .+++|+++|.+ ++.++.+.+.++.. ..++.++..|..
T Consensus 28 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 99 (299)
T 3t7c_A 28 GKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL---GRRIIASQVDVR 99 (299)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc---CCceEEEECCCC
Confidence 346777887765 777777654 47999999987 77777666666654 257888888864
No 369
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=33.38 E-value=42 Score=31.09 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=38.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+.| |+..++.++ .+++|++++.+++.++...+.+.. . .++.++..|..
T Consensus 22 k~vlVTGas~g-IG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~---~-~~~~~~~~Dv~ 79 (272)
T 2nwq_A 22 STLFITGATSG-FGEACARRFAEAGWSLVLTGRREERLQALAGELSA---K-TRVLPLTLDVR 79 (272)
T ss_dssp CEEEESSTTTS-SHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT---T-SCEEEEECCTT
T ss_pred cEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc---C-CcEEEEEcCCC
Confidence 35676676554 676666654 479999999999887766554432 1 36888888754
No 370
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=33.38 E-value=35 Score=34.94 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=45.8
Q ss_pred HHHHHHHHccCCCCCCCCCCCCCeEEEECCchhHHHHHHHHhhc-----CCeeEEecCcHHHHHHHHHHHHHC-CCCCCc
Q 014664 95 IHWIEDLLSSNIIPTTSRNGDKVKGFDIGTGANCIYPLLGASLL-----GWSFVGSDMTDVALEWAEKNVKSN-PHISEL 168 (420)
Q Consensus 95 i~wi~dll~~~~~~~~~~~~~~~~vLDIGTGsG~I~~~La~~~~-----~~~vvavDIs~~AL~~A~~N~~~N-~~l~~r 168 (420)
-.|+.+.+... + +..++|+|.|.|-+..-+...+. ..+++.+|+|+...+.=++.+... +.+..+
T Consensus 126 a~~~~~~~~~~--------g-~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~ 196 (432)
T 4f3n_A 126 ARPVAQALDAS--------G-TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAAR 196 (432)
T ss_dssp HHHHHHHHHHH--------T-CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGG
T ss_pred HHHHHHHHHhc--------C-CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCC
Confidence 35666666542 1 46899999999987665544321 247999999998877777766532 223456
Q ss_pred EEEE
Q 014664 169 IEIR 172 (420)
Q Consensus 169 I~l~ 172 (420)
|.+.
T Consensus 197 v~W~ 200 (432)
T 4f3n_A 197 VRWL 200 (432)
T ss_dssp EEEE
T ss_pred ceec
Confidence 7765
No 371
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=33.37 E-value=1.6e+02 Score=26.88 Aligned_cols=58 Identities=19% Similarity=0.126 Sum_probs=41.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCc----------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT----------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs----------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...+|=.|.++| |+..++.++ .+++|+++|.+ ++.++.+.+.+... ..++.++..|..
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 86 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH---NRRIVTAEVDVR 86 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc---CCceEEEEcCCC
Confidence 357888887766 777777655 47999999987 67776665555543 357888888864
No 372
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.81 E-value=1.4e+02 Score=27.13 Aligned_cols=58 Identities=10% Similarity=-0.037 Sum_probs=42.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++ .|+..++.++ .+++|+.+|.+++.++.+.+.++..+ ..++.++..|..
T Consensus 11 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~ 70 (262)
T 3pk0_A 11 RSVVVTGGTK-GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG--SGKVIGVQTDVS 70 (262)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS--SSCEEEEECCTT
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC--CCcEEEEEcCCC
Confidence 4677677654 4777777655 47899999999999888777776542 247888888864
No 373
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=32.76 E-value=63 Score=31.23 Aligned_cols=41 Identities=12% Similarity=0.221 Sum_probs=29.7
Q ss_pred CeEEEEC-Cch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIG-TGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIG-TGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
.+||=+| +|. |..+..++..+.+.+|+++|.+++-++.|++
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 4688887 543 4455555554468899999999999888864
No 374
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=32.70 E-value=1.7e+02 Score=26.32 Aligned_cols=57 Identities=26% Similarity=0.159 Sum_probs=41.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+.| |+..++.++ .+++|+.++.+++.++.+.+.+... ..++.++..|..
T Consensus 8 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~ 66 (262)
T 1zem_A 8 KVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREK---GVEARSYVCDVT 66 (262)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---TSCEEEEECCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEecCC
Confidence 46777776654 777777654 4789999999998887766666543 246888888864
No 375
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=32.70 E-value=1.8e+02 Score=26.16 Aligned_cols=57 Identities=19% Similarity=0.037 Sum_probs=40.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 10 k~vlVTGas~-giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 68 (260)
T 2ae2_A 10 CTALVTGGSR-GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG---FKVEASVCDLS 68 (260)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 4677777654 4777777654 47899999999988876666665432 46888888864
No 376
>1wey_A Calcipressin 1; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.59 E-value=19 Score=29.78 Aligned_cols=62 Identities=23% Similarity=0.355 Sum_probs=41.4
Q ss_pred CHHHHHhhCCCcccceeccCCCCccccCCCHHHHHHHHHHHhhh--cCCcE--------EEecCCceeCCCCC
Q 014664 28 DFALLASLYPSFEPFVFYSRDGRPRIDWTDFNATRELTRVLLLH--DHGLN--------WWIPDGQLCPTVPN 90 (420)
Q Consensus 28 dF~~La~~yP~l~~~v~~~~~g~~~IDf~d~~a~r~Lt~aLL~~--ffgl~--------~~vp~g~LiPrvP~ 90 (420)
-|.+|-..|-+...|.....-.|..|+|+++++... .|..|.+ |.|-. ..+.+..|=|+-|.
T Consensus 26 ~~e~Lf~~~~~~~tF~~lkSFRRirv~F~~~~~A~~-AR~~Lh~~~f~g~~~r~YFgq~~~~~~~~L~pP~p~ 97 (104)
T 1wey_A 26 KFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAAD-ARLRLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPD 97 (104)
T ss_dssp HHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHH-HHHTSTTSEETTEECEEECCCCSSCCSCCSCCCCCC
T ss_pred HHHHHHHhhCcCcceeecCcceEEEEEeCChHHHHH-HHHHhccceecCceeEEEecCCCCCcccccCCCCcc
Confidence 578899999988888877778899999999887533 3444433 44443 23334555555444
No 377
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.89 E-value=1.7e+02 Score=26.56 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=42.0
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecC-------------cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-------------s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+++|. +++.++.+.+.+... ..++.++..|..
T Consensus 15 gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 15 GRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ---GRKALTRVLDVR 87 (280)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---CCeEEEEEcCCC
Confidence 346777887765 777777655 4799999998 778877776666654 356888888864
No 378
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=31.70 E-value=1.7e+02 Score=26.35 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+.... ...++.++..|..
T Consensus 14 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 74 (267)
T 1iy8_A 14 RVVLITGGGS-GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-PDAEVLTTVADVS 74 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-TTCCEEEEECCTT
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEEccCC
Confidence 4677778654 4777777654 47899999999988876666554421 1246888888864
No 379
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=31.60 E-value=1.9e+02 Score=26.37 Aligned_cols=60 Identities=15% Similarity=0.029 Sum_probs=42.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCC--CCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNP--HISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~--~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+.... ....++.++..|..
T Consensus 19 k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~ 82 (303)
T 1yxm_A 19 QVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR 82 (303)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC
Confidence 467877854 55887777655 47899999999988877766665420 01246888888864
No 380
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=31.57 E-value=1.6e+02 Score=26.69 Aligned_cols=58 Identities=19% Similarity=0.094 Sum_probs=41.3
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+++|.+ ++.++.+.+.+...+ .++.++..|..
T Consensus 13 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 84 (278)
T 3sx2_A 13 GKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADVR 84 (278)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCTT
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCCC
Confidence 346787886554 777777665 47999999987 777776666555432 47888888864
No 381
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.43 E-value=1.1e+02 Score=28.01 Aligned_cols=60 Identities=10% Similarity=-0.041 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+...+....++.++..|..
T Consensus 7 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 68 (280)
T 1xkq_A 7 KTVIITGSSN-GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68 (280)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTT
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCC
Confidence 3567667554 4777777654 4799999999998887776666543211126888888864
No 382
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=31.20 E-value=1e+02 Score=28.01 Aligned_cols=58 Identities=14% Similarity=0.118 Sum_probs=41.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.++.+++.++.+.+.+... ...++.++..|..
T Consensus 21 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~ 80 (266)
T 4egf_A 21 KRALITGATKG-IGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--FGTDVHTVAIDLA 80 (266)
T ss_dssp CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCC
Confidence 46676676554 777777665 4799999999999888777666542 1246888888864
No 383
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=30.94 E-value=90 Score=28.90 Aligned_cols=57 Identities=12% Similarity=-0.024 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.+... ..++.++..|..
T Consensus 9 k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 67 (280)
T 3tox_A 9 KIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG---GGEAAALAGDVG 67 (280)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT---TCCEEECCCCTT
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEECCCC
Confidence 46776776654 777777654 4799999999999888777666543 346888777754
No 384
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=30.89 E-value=2e+02 Score=26.05 Aligned_cols=57 Identities=14% Similarity=-0.002 Sum_probs=40.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 22 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 80 (273)
T 1ae1_A 22 TTALVTGGSK-GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG---LNVEGSVCDLL 80 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCcc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 4677778654 4777777654 47899999999988876666555432 36888888764
No 385
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=30.84 E-value=58 Score=31.68 Aligned_cols=41 Identities=10% Similarity=-0.008 Sum_probs=29.1
Q ss_pred CeEEEECCchhHHHHHHH--HhhcCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGANCIYPLLG--ASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La--~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
.+||=+|.|+|.++.+.. ++..+++|+++|.+++-++.|++
T Consensus 172 ~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214 (379)
T ss_dssp CSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence 357777666666654432 23457899999999999988864
No 386
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=30.64 E-value=84 Score=30.07 Aligned_cols=40 Identities=23% Similarity=0.288 Sum_probs=28.5
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
.+||-+|+|. |..+..++. ..++ +|+++|.+++-++.|++
T Consensus 173 ~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCHHHHHHHHH
Confidence 4788898764 434344443 4577 89999999998888753
No 387
>1p65_A Nucleocapsid protein; viral protein; 2.60A {Porcine respiratory and reproductive svirus} SCOP: d.254.1.1
Probab=30.39 E-value=37 Score=25.82 Aligned_cols=42 Identities=36% Similarity=0.559 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhcCCcccccCc---eeEEEeeccCcchhhhhhccc
Q 014664 378 VLQSIETFFSASGASCKLNAS---SFTVNCTLINRSLYQMINVTQ 419 (420)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 419 (420)
-|++|..-|..++-+|.+.+| +|.|+.-+-----..+|+||-
T Consensus 25 cl~SiqTafNQGaGt~sLs~SG~isf~VeFmLP~~hTVRLIrvta 69 (73)
T 1p65_A 25 CLSSIQTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTA 69 (73)
T ss_dssp HHHHHHHHHHHTCSEEEECTTSCEEEEEEECCCHHHHHHHHHHC-
T ss_pred HHHHHHHHHhCCCceEEeccCCceeEEEEEecccceEEEEEEecc
Confidence 478999999999999999876 799998777666677777764
No 388
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.13 E-value=1.4e+02 Score=26.90 Aligned_cols=57 Identities=14% Similarity=-0.062 Sum_probs=40.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.++..+ .++.++..|..
T Consensus 6 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 64 (260)
T 2qq5_A 6 QVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG---GQCVPVVCDSS 64 (260)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---SEEEEEECCTT
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC---CceEEEECCCC
Confidence 456766755 45787777655 47899999999988876666554432 46888888864
No 389
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=29.93 E-value=1.1e+02 Score=27.49 Aligned_cols=59 Identities=12% Similarity=0.047 Sum_probs=40.5
Q ss_pred CeEEEECCchhHHHHHHHHhh-----cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL-----LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~-----~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++ .|+..++.++ .+++|+++|.+++.++.+.+.+.... -..++.++..|..
T Consensus 7 k~~lVTGas~-gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~ 70 (259)
T 1oaa_A 7 AVCVLTGASR-GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ-PDLKVVLAAADLG 70 (259)
T ss_dssp EEEEESSCSS-HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC-TTSEEEEEECCTT
T ss_pred cEEEEeCCCC-hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC-CCCeEEEEecCCC
Confidence 3566666655 4777777654 47999999999988877666664421 1246888888864
No 390
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=29.73 E-value=1.5e+02 Score=25.92 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=40.7
Q ss_pred eEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
++|=.|.++ .|+..++.++ .+++|+.++.+++.++.+.+.+... ...++.++..|..
T Consensus 4 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~ 62 (235)
T 3l77_A 4 VAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--QGVEVFYHHLDVS 62 (235)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--cCCeEEEEEeccC
Confidence 566667554 4787777665 4789999999999888776666422 1246888888864
No 391
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=29.41 E-value=2.2e+02 Score=25.81 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=41.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecC-------------cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-------------TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-------------s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...+|=.|.++| |+..++.++ .+++|+++|. +++.++.+.+.+...+ .++.++..|..
T Consensus 11 ~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 83 (277)
T 3tsc_A 11 GRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN---RRIVAAVVDTR 83 (277)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCC
Confidence 346777887665 777776654 4799999998 6777777666665542 46888888864
No 392
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=29.23 E-value=1.1e+02 Score=28.06 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=42.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.++.+++.++...+.+...+ .++.++..|..
T Consensus 33 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dl~ 91 (276)
T 3r1i_A 33 KRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG---GKALPIRCDVT 91 (276)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence 46777777655 777777655 47999999999988887777766543 46788888864
No 393
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=28.94 E-value=1.7e+02 Score=26.49 Aligned_cols=54 Identities=11% Similarity=0.035 Sum_probs=39.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.+ ..++.++..|..
T Consensus 31 k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~ 86 (281)
T 3ppi_A 31 ASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADEL------GNRAEFVSTNVT 86 (281)
T ss_dssp EEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEcCCC
Confidence 46777887655 777777655 4799999999998877665544 246888888864
No 394
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=28.64 E-value=1.4e+02 Score=26.71 Aligned_cols=56 Identities=20% Similarity=0.182 Sum_probs=39.4
Q ss_pred eEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
++|=.|.+. .|+..++.++ .+++|++++.+++.++...+.+...+ .++.++..|..
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 61 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG---GHAVAVKVDVS 61 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 466667554 4777777654 47899999999988876666665432 46888888764
No 395
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=28.54 E-value=1.4e+02 Score=27.42 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=36.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEE-EccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIR-KVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~-~~d~~ 177 (420)
.+||=.|. +|.|+..++.++ .+++|++++.++...+....-+... ...+++++ ..|..
T Consensus 12 ~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 12 SLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK--YPGRFETAVVEDML 72 (342)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--STTTEEEEECSCTT
T ss_pred CEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc--CCCceEEEEecCCc
Confidence 46776664 467888777654 4789999999987665443333221 11457777 56653
No 396
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=28.52 E-value=90 Score=28.76 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=41.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.+...+ .++.++..|..
T Consensus 34 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 92 (275)
T 4imr_A 34 RTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLS 92 (275)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCC
Confidence 46777776554 777777655 47999999999988887777766542 46888888864
No 397
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=28.31 E-value=1.6e+02 Score=26.85 Aligned_cols=59 Identities=14% Similarity=0.018 Sum_probs=41.8
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+.+|.+.+.++.+...+... ...++.++..|..
T Consensus 27 ~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~ 87 (277)
T 4fc7_A 27 DKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--TGRRCLPLSMDVR 87 (277)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEcCCC
Confidence 356888887655 777777665 4789999999988877666555432 1246888888864
No 398
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=28.31 E-value=1.4e+02 Score=27.43 Aligned_cols=57 Identities=14% Similarity=0.023 Sum_probs=40.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=.|.++ .|+..++.++ .+++|++++.+++.++.....+...+ .++.++..|..
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 87 (270)
T 3ftp_A 29 QVAIVTGASR-GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG---LEGRGAVLNVN 87 (270)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT---CCCEEEECCTT
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEEeCC
Confidence 4667667554 4777777654 47999999999998887777776542 35777777754
No 399
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=28.13 E-value=1.2e+02 Score=27.76 Aligned_cols=57 Identities=9% Similarity=0.035 Sum_probs=41.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|+.+|.+++.++.+.+.++..+ .++.++..|..
T Consensus 27 k~~lVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 85 (271)
T 4ibo_A 27 RTALVTGSSR-GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG---HDAEAVAFDVT 85 (271)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEcCCC
Confidence 4677677554 4777777665 47999999999999888777776542 46888877754
No 400
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=27.93 E-value=1.6e+02 Score=26.81 Aligned_cols=58 Identities=12% Similarity=-0.030 Sum_probs=40.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.....+...+ ..++.++..|..
T Consensus 29 k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~ 88 (286)
T 1xu9_A 29 KKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG--AASAHYIAGTME 88 (286)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT--CSEEEEEECCTT
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CCceEEEeCCCC
Confidence 467777755 45787777654 47899999999998877666555432 236888888764
No 401
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=27.91 E-value=2.4e+02 Score=25.83 Aligned_cols=58 Identities=9% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
...+|=.|.++| |+..++.++ .+++|+.+|. +++.++...+.+...+ .++.++..|..
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 89 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRADLA 89 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 346777786655 777777654 4789999996 7777777666666542 46888888864
No 402
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=27.90 E-value=2.1e+02 Score=26.50 Aligned_cols=57 Identities=12% Similarity=0.002 Sum_probs=40.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|+++|.+++.++.+.+.++..+ .++.++..|..
T Consensus 35 k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 93 (291)
T 3cxt_A 35 KIALVTGASY-GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG---INAHGYVCDVT 93 (291)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTT
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEEecCC
Confidence 4677777654 4777777655 47899999999988876666665432 35778888764
No 403
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.85 E-value=1.4e+02 Score=27.73 Aligned_cols=60 Identities=13% Similarity=-0.002 Sum_probs=41.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+...+....++.++..|..
T Consensus 27 k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~ 88 (297)
T 1xhl_A 27 KSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88 (297)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCC
Confidence 4567667554 5777777655 4799999999998887776666553211126888888864
No 404
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=27.51 E-value=76 Score=27.30 Aligned_cols=40 Identities=8% Similarity=-0.054 Sum_probs=26.6
Q ss_pred CCeEEEECCchhHHHHHHHH--hhcCCeeEEecCcHHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~--~~~~~~vvavDIs~~AL~~A~ 156 (420)
..++|.+|++. .|+..++. +..+++|+++|.+++.++.++
T Consensus 39 g~~vlV~Ga~g-giG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 39 GERVLIHSATG-GVGMAAVSIAKMIGARIYTTAGSDAKREMLS 80 (198)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCEEEEeeCCC-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 35799988432 24433332 235789999999998877664
No 405
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=27.35 E-value=1.5e+02 Score=26.49 Aligned_cols=57 Identities=9% Similarity=-0.035 Sum_probs=40.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+...+ .++.++..|..
T Consensus 15 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 73 (260)
T 2zat_A 15 KVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG---LSVTGTVCHVG 73 (260)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEccCC
Confidence 466766655 45787777654 47899999999988876666665442 35788887754
No 406
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.28 E-value=1.6e+02 Score=26.68 Aligned_cols=60 Identities=12% Similarity=-0.007 Sum_probs=40.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+........++.++..|..
T Consensus 7 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 68 (278)
T 1spx_A 7 KVAIITGSS-NGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68 (278)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccC
Confidence 356666655 45777777654 4789999999998887766655321112346888888864
No 407
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=27.26 E-value=77 Score=28.64 Aligned_cols=52 Identities=10% Similarity=0.110 Sum_probs=33.3
Q ss_pred EEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 119 GFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 119 vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
+|=.|.+ |.|+..++.++ .+++|++++.+++.++...+.+ ..++.++..|..
T Consensus 3 vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 56 (248)
T 3asu_A 3 VLVTGAT-AGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------GDNLYIAQLDVR 56 (248)
T ss_dssp EEETTTT-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred EEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCceEEEEcCCC
Confidence 3333443 44666666554 4799999999988776554433 135788888754
No 408
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=27.05 E-value=1.1e+02 Score=29.44 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=28.9
Q ss_pred CCeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..+||=+|+|. |..+..++ +..+++++++|.+++.++.|++
T Consensus 190 g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIA-KATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHH-HHcCCEEEEEecCchhHHHHHH
Confidence 35788888764 33333333 4567899999999999888754
No 409
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=26.47 E-value=2.2e+02 Score=25.40 Aligned_cols=58 Identities=16% Similarity=0.030 Sum_probs=39.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+... ...++.++..|..
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~ 67 (263)
T 3ai3_A 8 KVAVITGSSS-GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK--FGVRVLEVAVDVA 67 (263)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--cCCceEEEEcCCC
Confidence 4677777654 4777777654 4789999999998877665555432 0236888888864
No 410
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=26.47 E-value=1.5e+02 Score=24.06 Aligned_cols=50 Identities=14% Similarity=0.150 Sum_probs=34.5
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..+++=+|+|. ++..++..+ .++.|+++|.+++.++.+++ .+ +.++.+|.
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g-----~~~i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG-----VRAVLGNA 58 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT-----CEEEESCT
T ss_pred CCCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC-----CCEEECCC
Confidence 34688888765 566666544 47899999999998876653 22 45666663
No 411
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=26.41 E-value=1.3e+02 Score=27.71 Aligned_cols=58 Identities=16% Similarity=0.157 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++ .|+..++.++ .+++|+++|.+++.++.+.+.+...+ ...+.++..|..
T Consensus 34 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 93 (281)
T 4dry_A 34 RIALVTGGGT-GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT--GNIVRAVVCDVG 93 (281)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SSCEEEEECCTT
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCeEEEEEcCCC
Confidence 4667666554 5787777665 47999999999998887776665432 234688888864
No 412
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=26.29 E-value=1.9e+02 Score=25.38 Aligned_cols=58 Identities=17% Similarity=0.008 Sum_probs=41.1
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
..++|=.|.++ .|+..++.++ .+++|+.++.+++.++.+.+.++..+ ...+.++..|.
T Consensus 14 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 73 (247)
T 3i1j_A 14 GRVILVTGAAR-GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG--QPQPLIIALNL 73 (247)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--SCCCEEEECCT
T ss_pred CCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--CCCceEEEecc
Confidence 34677777655 4777777655 47899999999999988877776653 23466666654
No 413
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=26.27 E-value=1.7e+02 Score=26.18 Aligned_cols=57 Identities=11% Similarity=-0.036 Sum_probs=40.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.....++..+ .++.++..|..
T Consensus 15 k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 73 (266)
T 1xq1_A 15 KTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG---FQVTGSVCDAS 73 (266)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CeeEEEECCCC
Confidence 467766654 45787777655 47899999999988877666665532 36888888754
No 414
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.12 E-value=1.1e+02 Score=24.66 Aligned_cols=38 Identities=24% Similarity=0.140 Sum_probs=28.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHH
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~ 156 (420)
.+++=+|+|. ++..++..+ .+++|+++|.+++.++.++
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~ 46 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLE 46 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 3678888864 676666554 4789999999999877664
No 415
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=25.57 E-value=2.7e+02 Score=25.23 Aligned_cols=58 Identities=16% Similarity=0.004 Sum_probs=41.0
Q ss_pred CCeEEEECCchhHHHHHHHHhh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+..++.++ .+++|+.+|.+ .+.++.....++.. ..++.++..|..
T Consensus 10 ~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 81 (281)
T 3s55_A 10 GKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT---GRRCISAKVDVK 81 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc---CCeEEEEeCCCC
Confidence 346787887655 777777665 47999999997 66666665555554 246888888864
No 416
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.47 E-value=2.7e+02 Score=25.10 Aligned_cols=57 Identities=11% Similarity=0.057 Sum_probs=40.3
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|++++. +++.++...+.++..+ .++.++..|..
T Consensus 30 k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 89 (271)
T 4iin_A 30 KNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG---YKAAVIKFDAA 89 (271)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CceEEEECCCC
Confidence 46777777655 777777655 4789999999 6666666666665542 46888888864
No 417
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=25.35 E-value=2.2e+02 Score=26.60 Aligned_cols=57 Identities=19% Similarity=0.114 Sum_probs=40.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCc------------HHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMT------------DVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs------------~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++..+ .+++|+++|.+ ++.++.+.+.+...+ .++.++..|..
T Consensus 47 k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 117 (317)
T 3oec_A 47 KVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG---RRIIARQADVR 117 (317)
T ss_dssp CEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC---CeEEEEECCCC
Confidence 46777776655 777777655 47999999986 777776666665542 46888888864
No 418
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=25.35 E-value=1.2e+02 Score=28.87 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=27.5
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~ 156 (420)
.+||-+|+|. |..+..++ +..+++|+++|.+++.++.|+
T Consensus 170 ~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAA-KAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHcCCEEEEEcCCHHHHHHHH
Confidence 4788888754 33333333 345788999999999998886
No 419
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=24.67 E-value=1.1e+02 Score=28.90 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=29.3
Q ss_pred CeEEEECCch-hHHHHHHHHhh-cCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASL-LGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~-~~~~vvavDIs~~AL~~A~~ 157 (420)
.+||-+|+|. |..+..++... ++++|+++|.+++.++.|++
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 4788899863 33334444433 28899999999999988865
No 420
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.59 E-value=2.5e+02 Score=25.20 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=39.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+.... -..++.++..|..
T Consensus 8 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~ 68 (267)
T 2gdz_A 8 KVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EPQKTLFIQCDVA 68 (267)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CGGGEEEEECCTT
T ss_pred CEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CCCceEEEecCCC
Confidence 467777755 45777777654 47999999999988766555554320 1346888888864
No 421
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=24.37 E-value=1.9e+02 Score=25.73 Aligned_cols=57 Identities=19% Similarity=0.004 Sum_probs=39.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|. +|.|+..++.++ .+++|++++. +++.++...+.++.. ..++.++..|..
T Consensus 22 k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~ 81 (274)
T 1ja9_A 22 KVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADIS 81 (274)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTT
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCC
Confidence 46776665 456888777665 4789999999 887777666655543 246888888864
No 422
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=24.34 E-value=1.8e+02 Score=26.08 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=40.6
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDN 176 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~ 176 (420)
.++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|.
T Consensus 13 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~ 71 (252)
T 3f1l_A 13 RIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEET--GRQPQWFILDL 71 (252)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH--SCCCEEEECCT
T ss_pred CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc--CCCceEEEEec
Confidence 46777776654 777777655 47899999999998887766665432 23567777775
No 423
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=24.13 E-value=1.2e+02 Score=28.91 Aligned_cols=40 Identities=15% Similarity=0.034 Sum_probs=27.7
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
.+||=+|+|. |..+..++ +..++ +|+++|.+++.++.|++
T Consensus 168 ~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCCHHHHHHHHH
Confidence 4677778764 33333333 44577 89999999999888865
No 424
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=23.65 E-value=2e+02 Score=25.49 Aligned_cols=57 Identities=12% Similarity=0.007 Sum_probs=39.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++. +++.++.+.+.++..+ .++.++..|..
T Consensus 5 k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 64 (246)
T 2uvd_A 5 KVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG---SDAIAVRADVA 64 (246)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 356666654 45777777654 4789999999 8887776666665432 46888888754
No 425
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=23.54 E-value=1.6e+02 Score=25.97 Aligned_cols=57 Identities=11% Similarity=0.047 Sum_probs=38.9
Q ss_pred eEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
++|=.|.+ |.|+..++.++ .+++|++++.+++.++.....+... ...++.++..|..
T Consensus 4 ~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~ 62 (250)
T 2cfc_A 4 VAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA--YADKVLRVRADVA 62 (250)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT--TGGGEEEEECCTT
T ss_pred EEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCcEEEEEecCC
Confidence 56666754 55787777655 4789999999998877655554111 2356888888864
No 426
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=23.19 E-value=75 Score=32.07 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=36.5
Q ss_pred CCeEEEECCchhHHHHH--HHHhhc--CCeeEEecCcHHH------------HHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 116 KVKGFDIGTGANCIYPL--LGASLL--GWSFVGSDMTDVA------------LEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~--La~~~~--~~~vvavDIs~~A------------L~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..++|=.|.++| |+.. ++..+. +++|++++.+... .+.+++-++..+ .++..+..|..
T Consensus 60 gK~aLVTGassG-IG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~Dvt 133 (418)
T 4eue_A 60 PKKVLIVGASSG-FGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG---LVAKNFIEDAF 133 (418)
T ss_dssp CSEEEEESCSSH-HHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEESCTT
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC---CcEEEEEeeCC
Confidence 457888888877 6766 665554 8999998886432 122333333332 35778888754
No 427
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=23.17 E-value=2.7e+02 Score=25.26 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=40.8
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++.+.+.+... ...++.++..|..
T Consensus 27 k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~ 86 (302)
T 1w6u_A 27 KVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--TGNKVHAIQCDVR 86 (302)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HSSCEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCceEEEEeCCC
Confidence 467777755 45787777655 4789999999998887666555432 1246888888864
No 428
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=23.17 E-value=2.7e+02 Score=25.43 Aligned_cols=58 Identities=14% Similarity=0.072 Sum_probs=41.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.+|. +++.++...+.+... ...++.++..|..
T Consensus 26 k~~lVTGas~G-IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~ 86 (281)
T 3v2h_A 26 KTAVITGSTSG-IGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL--SSGTVLHHPADMT 86 (281)
T ss_dssp CEEEEETCSSH-HHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT--CSSCEEEECCCTT
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc--cCCcEEEEeCCCC
Confidence 46788886655 777777665 4789999999 777777666666543 2357888888764
No 429
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.16 E-value=2.8e+02 Score=25.08 Aligned_cols=57 Identities=14% Similarity=-0.023 Sum_probs=39.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHH-HHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNV-KSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~-~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++.+++.++.+.+.+ +.. ..++.++..|..
T Consensus 22 k~~lVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~ 81 (267)
T 1vl8_A 22 RVALVTGGSR-GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY---GVETMAFRCDVS 81 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTT
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---CCeEEEEEcCCC
Confidence 4677777654 4777777654 4789999999998877665555 322 235778888754
No 430
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=23.07 E-value=1.9e+02 Score=25.58 Aligned_cols=57 Identities=9% Similarity=-0.115 Sum_probs=39.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++. +++.++...+.+... ..++.++..|..
T Consensus 8 k~vlITGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~ 67 (261)
T 1gee_A 8 KVVVITGSS-TGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---GGEAIAVKGDVT 67 (261)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCEEEEEECCTT
T ss_pred CEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---CCceEEEECCCC
Confidence 356666654 55787777654 4789999999 887777666666543 246888888754
No 431
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=22.74 E-value=2.7e+02 Score=24.93 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=39.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.+|.+++.++...+.. ..++.++..|..
T Consensus 9 k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 64 (255)
T 4eso_A 9 KKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF------GPRVHALRSDIA 64 (255)
T ss_dssp CEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCcceEEEccCC
Confidence 46787887655 777777655 4799999999998876655443 236888888864
No 432
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=22.50 E-value=1.2e+02 Score=28.43 Aligned_cols=41 Identities=20% Similarity=0.106 Sum_probs=27.7
Q ss_pred CCeEEEECC-c-hhHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGT-G-ANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGT-G-sG~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..++|=+|+ | -|.....++ +..+++++++|.+++-++.|++
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKLKIAKE 191 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHH
Confidence 357888883 2 233333333 3467899999999998887754
No 433
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=22.38 E-value=97 Score=29.99 Aligned_cols=40 Identities=20% Similarity=0.114 Sum_probs=28.6
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
.+||-+|+|. |...+.++ +..+++|+++|.+++.++.|++
T Consensus 196 ~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHH
Confidence 4788888864 33333344 3457899999999999888864
No 434
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=22.21 E-value=1.4e+02 Score=27.86 Aligned_cols=58 Identities=10% Similarity=-0.052 Sum_probs=41.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|+.+|.+++.++.+.+.+...+ ..++.++..|..
T Consensus 42 k~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dv~ 101 (293)
T 3rih_A 42 RSVLVTGGTK-GIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG--AGNVIGVRLDVS 101 (293)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS--SSCEEEEECCTT
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC--CCcEEEEEEeCC
Confidence 4677667655 4777777655 47999999999988877766665432 247888888864
No 435
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=22.12 E-value=1.6e+02 Score=27.89 Aligned_cols=39 Identities=23% Similarity=0.217 Sum_probs=27.7
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAE 156 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~ 156 (420)
.+||-+|+|. |.....++ +..+++++++|.+++.++.|+
T Consensus 166 ~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~~~ 205 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKLELAK 205 (339)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHHH
Confidence 4788899853 33333333 345789999999999988875
No 436
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.97 E-value=1.6e+02 Score=25.86 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=39.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++...+.+... ...++.++..|..
T Consensus 8 ~~vlVtGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~ 67 (248)
T 2pnf_A 8 KVSLVTGST-RGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--YGVKAHGVEMNLL 67 (248)
T ss_dssp CEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--HCCCEEEEECCTT
T ss_pred CEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--cCCceEEEEccCC
Confidence 356666654 55787777654 4789999999998877665555431 1235888888754
No 437
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=21.84 E-value=90 Score=29.68 Aligned_cols=40 Identities=13% Similarity=-0.084 Sum_probs=28.3
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
.+||=+|+|. |..+..++ +..+++|+++|.+++-++.|++
T Consensus 178 ~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTTHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHHHHHHHh
Confidence 4677788764 33333344 3457899999999999888754
No 438
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=21.72 E-value=1.3e+02 Score=28.33 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=42.4
Q ss_pred EEEecCCceeCCCCCcHhHHHHH---HHHHc----cCCCCCCCCCCCCCeEEEEC-Cc-hhHHHHHHHHhhcCCeeEEec
Q 014664 76 NWWIPDGQLCPTVPNRSNYIHWI---EDLLS----SNIIPTTSRNGDKVKGFDIG-TG-ANCIYPLLGASLLGWSFVGSD 146 (420)
Q Consensus 76 ~~~vp~g~LiPrvP~R~nyi~wi---~dll~----~~~~~~~~~~~~~~~vLDIG-TG-sG~I~~~La~~~~~~~vvavD 146 (420)
.+.+|...++|- |.-..+.+.. ...+. ....... ....+||=+| +| -|.....++ +..+++++++|
T Consensus 98 y~~v~~~~~~~~-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~ 172 (325)
T 3jyn_A 98 VHVLPEANLVKL-ADSVSFEQAAALMLKGLTVQYLLRQTYQV---KPGEIILFHAAAGGVGSLACQWA-KALGAKLIGTV 172 (325)
T ss_dssp EEEEEGGGEEEC-CTTSCHHHHHHHHHHHHHHHHHHHTTSCC---CTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEE
T ss_pred eEEecHHHeEEC-CCCCCHHHHhhhhhhHHHHHHHHHHhcCC---CCCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEe
Confidence 467888888876 4444433321 01110 0000001 1235788887 33 233333333 34578999999
Q ss_pred CcHHHHHHHHH
Q 014664 147 MTDVALEWAEK 157 (420)
Q Consensus 147 Is~~AL~~A~~ 157 (420)
.+++-++.|++
T Consensus 173 ~~~~~~~~~~~ 183 (325)
T 3jyn_A 173 SSPEKAAHAKA 183 (325)
T ss_dssp SSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999988864
No 439
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=21.66 E-value=1.4e+02 Score=28.93 Aligned_cols=39 Identities=18% Similarity=0.092 Sum_probs=27.3
Q ss_pred CeEEEECCch-hHHHHHHHHhhcC-CeeEEecCcHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLG-WSFVGSDMTDVALEWAE 156 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~-~~vvavDIs~~AL~~A~ 156 (420)
.+||-+|+|. |..++.++ +..+ .+|+++|.+++.++.|+
T Consensus 197 ~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIA-RSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTBSEEEEEESCHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHH-HHcCCceEEEEcCCHHHHHHHH
Confidence 4789999653 22333333 3457 69999999999988886
No 440
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=21.46 E-value=1.4e+02 Score=28.20 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=28.9
Q ss_pred CCeEEEECC--chhHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGT--GANCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGT--GsG~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..++|-+|+ |-|.....++. ..+++++++|.+++.++.+++
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHh
Confidence 357999997 33433333333 457899999999999988864
No 441
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=21.44 E-value=2.9e+02 Score=25.01 Aligned_cols=57 Identities=14% Similarity=-0.018 Sum_probs=40.1
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=.|.++| |+..++.++ .+++|+.++. +++.++...+-++..+ .++.++..|..
T Consensus 29 k~vlVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 88 (269)
T 4dmm_A 29 RIALVTGASRG-IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG---GEAFAVKADVS 88 (269)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC---CcEEEEECCCC
Confidence 46676776554 777777655 4789999988 7777776666665542 46888888864
No 442
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=21.29 E-value=1.1e+02 Score=29.46 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=27.1
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAE 156 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~ 156 (420)
.+||-+|+|. |...+.++. ..++ +|+++|.+++.++.|+
T Consensus 194 ~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCH-SAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCGGGHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCCHHHHHHHH
Confidence 4788888654 333333443 4577 8999999999988875
No 443
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=21.28 E-value=3.4e+02 Score=24.58 Aligned_cols=57 Identities=16% Similarity=-0.041 Sum_probs=40.7
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++..+ .+++|++++.+++.++.+.+.++.. ..++.++..|..
T Consensus 45 k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~ 103 (285)
T 2c07_A 45 KVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---GYESSGYAGDVS 103 (285)
T ss_dssp CEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred CEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---CCceeEEECCCC
Confidence 467777765 45888887765 3689999999988877666666543 246888888864
No 444
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=21.19 E-value=2e+02 Score=25.12 Aligned_cols=56 Identities=20% Similarity=0.130 Sum_probs=39.0
Q ss_pred eEEEECCchhHHHHHHHHhh--cCC-------eeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 118 KGFDIGTGANCIYPLLGASL--LGW-------SFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~--~~~-------~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
++|=.|.+ |.|+..++.++ .++ +|++++.+++.++.....+... ..++.++..|..
T Consensus 4 ~vlITGas-ggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~ 68 (244)
T 2bd0_A 4 ILLITGAG-KGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---GALTDTITADIS 68 (244)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---TCEEEEEECCTT
T ss_pred EEEEECCC-ChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---CCeeeEEEecCC
Confidence 46666654 55777777654 367 8999999998887666665543 246888888864
No 445
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.10 E-value=2.6e+02 Score=25.10 Aligned_cols=57 Identities=14% Similarity=-0.005 Sum_probs=40.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEe-cCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGS-DMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvav-DIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.+ +.+++.++.+.+.++.. ..++.++..|..
T Consensus 9 k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 68 (259)
T 3edm_A 9 RTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---GRSALAIKADLT 68 (259)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---TSCCEEEECCTT
T ss_pred CEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---CCceEEEEcCCC
Confidence 46777887665 777777654 47899888 77777777776666543 346888888864
No 446
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=20.97 E-value=1.9e+02 Score=26.18 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=40.7
Q ss_pred CeEEEECCchh-HHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGAN-CIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG-~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=-|.+++ .|+..++.++ .+++|+.+|.+++.++-+.+-++..+ ..++.++..|..
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 68 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQ 68 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTT
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCC
Confidence 45666664331 3666666554 48999999999998888877776542 246778888864
No 447
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=20.93 E-value=1.9e+02 Score=26.03 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=39.5
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecC-cHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDM-TDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDI-s~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+. .|+..++.++ .+++|++++. +++.++.+.+.+... ...++.++..|..
T Consensus 12 k~~lVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~ 72 (276)
T 1mxh_A 12 PAAVITGGAR-RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--RAGSAVLCKGDLS 72 (276)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--STTCEEEEECCCS
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh--cCCceEEEeccCC
Confidence 3566666554 5787777655 4789999999 888877665555432 0236888888864
No 448
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.88 E-value=1.8e+02 Score=25.56 Aligned_cols=56 Identities=18% Similarity=0.054 Sum_probs=38.6
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.+ |.|+..++.++ .+++|++++.+++.++...+.+.. ..++.++..|..
T Consensus 7 k~vlVtGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~D~~ 64 (251)
T 1zk4_A 7 KVAIITGGT-LGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT----PDQIQFFQHDSS 64 (251)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC----TTTEEEEECCTT
T ss_pred cEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----cCceEEEECCCC
Confidence 456666654 45787777654 478999999998877665544432 146888888864
No 449
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.68 E-value=2.5e+02 Score=25.75 Aligned_cols=54 Identities=22% Similarity=0.174 Sum_probs=37.9
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++.+.+.+ ..++.++..|..
T Consensus 30 k~vlVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 85 (277)
T 3gvc_A 30 KVAIVTGAGAG-IGLAVARRLADEGCHVLCADIDGDAADAAATKI------GCGAAACRVDVS 85 (277)
T ss_dssp CEEEETTTTST-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------CSSCEEEECCTT
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCcceEEEecCC
Confidence 46676776554 777776654 4799999999998877665443 235778888764
No 450
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=20.45 E-value=2.7e+02 Score=24.80 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=37.9
Q ss_pred eEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHH--HHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 118 KGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVA--LEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 118 ~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~A--L~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
++|=.|.+. .|+..++.++ .+++|++++.+++. ++...+.++.. ..++.++..|..
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~ 63 (258)
T 3a28_C 4 VAMVTGGAQ-GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---DQKAVFVGLDVT 63 (258)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---TCCEEEEECCTT
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---CCcEEEEEccCC
Confidence 566667554 4777776654 47899999998876 65555555432 246888888864
No 451
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=20.31 E-value=1.5e+02 Score=28.10 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=27.6
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
.+||-+|+|. |.....++ +..++ +|+++|.+++.++.|++
T Consensus 169 ~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp CCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHHHHHH
Confidence 4788888843 32333333 34577 99999999999888863
No 452
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=20.29 E-value=92 Score=29.82 Aligned_cols=41 Identities=20% Similarity=0.040 Sum_probs=28.9
Q ss_pred CCeEEEECCch-hHHHHHHHHhhcCCeeEEecCcHHHHHHHHH
Q 014664 116 KVKGFDIGTGA-NCIYPLLGASLLGWSFVGSDMTDVALEWAEK 157 (420)
Q Consensus 116 ~~~vLDIGTGs-G~I~~~La~~~~~~~vvavDIs~~AL~~A~~ 157 (420)
..+||-+|+|. |.....++ +..+++|+++|.+++.++.|++
T Consensus 180 g~~VlV~GaG~vG~~~~qla-k~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSSTTHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHHH
Confidence 35799999853 33333333 3457899999999998888865
No 453
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=20.24 E-value=1.8e+02 Score=27.29 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=27.2
Q ss_pred CCeEEEECCchhHHHHHHHH--hhcCCeeEEecCcHHHHHHH
Q 014664 116 KVKGFDIGTGANCIYPLLGA--SLLGWSFVGSDMTDVALEWA 155 (420)
Q Consensus 116 ~~~vLDIGTGsG~I~~~La~--~~~~~~vvavDIs~~AL~~A 155 (420)
..++|-+|++.| |+..++. +..+++|+++|.+++.++.+
T Consensus 146 g~~vlV~Ga~gg-iG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 146 GETVLVSAAAGA-VGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SCEEEEESTTBH-HHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEecCCCc-HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 357999997332 4443332 33578999999999888877
No 454
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=20.19 E-value=2.6e+02 Score=24.91 Aligned_cols=54 Identities=19% Similarity=0.148 Sum_probs=38.2
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+.+|.+++.++.+...+ ..++.++..|..
T Consensus 7 k~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~ 62 (247)
T 3rwb_A 7 KTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAASI------GKKARAIAADIS 62 (247)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------CTTEEECCCCTT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCceEEEEcCCC
Confidence 46777886655 777777654 4799999999998877655443 235777777754
No 455
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=20.18 E-value=3.7e+02 Score=23.77 Aligned_cols=54 Identities=15% Similarity=0.068 Sum_probs=39.0
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
.++|=.|.++| |+..++.++ .+++|+++|.+++.++...+.. ..++.++..|..
T Consensus 10 k~vlITGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~ 65 (261)
T 3n74_A 10 KVALITGAGSG-FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------GDAALAVAADIS 65 (261)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTT
T ss_pred CEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCceEEEEecCC
Confidence 46777887765 777776654 4799999999998877655433 246888888864
No 456
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=20.07 E-value=1.1e+02 Score=29.30 Aligned_cols=40 Identities=13% Similarity=-0.008 Sum_probs=27.4
Q ss_pred CeEEEECCch-hHHHHHHHHhhcCC-eeEEecCcHHHHHHHHH
Q 014664 117 VKGFDIGTGA-NCIYPLLGASLLGW-SFVGSDMTDVALEWAEK 157 (420)
Q Consensus 117 ~~vLDIGTGs-G~I~~~La~~~~~~-~vvavDIs~~AL~~A~~ 157 (420)
.+||=+|+|. |..++.++. ..++ +|+++|.+++.++.|++
T Consensus 193 ~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCK-AAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCSEEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-HcCCCeEEEECCCHHHHHHHHH
Confidence 4788888754 333333443 4567 89999999998888753
No 457
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.05 E-value=2.9e+02 Score=25.56 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=34.4
Q ss_pred CeEEEECCchhHHHHHHHHhh--cCCeeEEecCcHHHHHHHHHHHHHCCCCCCcEEEEEccCC
Q 014664 117 VKGFDIGTGANCIYPLLGASL--LGWSFVGSDMTDVALEWAEKNVKSNPHISELIEIRKVDNS 177 (420)
Q Consensus 117 ~~vLDIGTGsG~I~~~La~~~--~~~~vvavDIs~~AL~~A~~N~~~N~~l~~rI~l~~~d~~ 177 (420)
..+|=-|.++| |+..++.++ .+++|+.+|.+.. +-+.+-++..+ .++..+..|..
T Consensus 10 KvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g---~~~~~~~~Dv~ 66 (247)
T 4hp8_A 10 RKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG---GNASALLIDFA 66 (247)
T ss_dssp CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT---CCEEEEECCTT
T ss_pred CEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC---CcEEEEEccCC
Confidence 45566666665 777776655 4799999999843 22333344442 46778888754
Done!