BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014666
(420 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 248 bits (632), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 183/306 (59%), Gaps = 32/306 (10%)
Query: 72 PTE-ETQQRVPSKPEKDSFILENFKLRKLNGSAKTNNPENKPSPPQPEQQQLSNIASERE 130
PTE ET R P + +LE + R L G P P P Q E+ + +E
Sbjct: 47 PTEPETTAR--EAPSRHELLLERLRQRHLKGV-----PAATPRPAQREKGRGGGGGGAQE 99
Query: 131 KSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSG 190
EVV SF+ELGL E++ A+ +MG+ P+EIQCVG+PAVL G SVVL S +GSG
Sbjct: 100 LQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSG 159
Query: 191 RTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALL--PMKPMHPRAIVLCTTEESAD 248
+TLAYLLPLVQ +LRRDEA+L MKP PRA+VLC T E +
Sbjct: 160 KTLAYLLPLVQ------------------LLRRDEAMLGMSMKPRRPRAVVLCPTRELTE 201
Query: 249 QGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDD 308
Q F +AK ISH AR S+M +GG + ED N P+ M++ TP +L HI+D N+ D
Sbjct: 202 QVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGD 261
Query: 309 IRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTA----AIAEMLGEQ 364
I+Y+VLDEADT+FD+GFGP+I K L PLK+ A K QGFQT+LVTA A+ +++ E+
Sbjct: 262 IKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEE 321
Query: 365 LSSLME 370
++
Sbjct: 322 FEGIVH 327
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 224 bits (572), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/261 (46%), Positives = 168/261 (64%), Gaps = 26/261 (9%)
Query: 116 QPEQQQLSNIASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
+P QQ+ S++ E+SS + ++V +FQELGL E++ A++++ + VP+EIQC+GIP
Sbjct: 85 KPPQQRPSSVVGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIP 144
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALL--PMK 231
AV+ KSVVL S +GSG+TLAYLLP+VQ ++R DEA L K
Sbjct: 145 AVMERKSVVLGSHTGSGKTLAYLLPIVQ------------------LMREDEANLGKKTK 186
Query: 232 PMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIAT 291
P PR +VLC T E ++Q + +AK ISH AR S + +GG + ED N I M++ T
Sbjct: 187 PRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGT 246
Query: 292 PSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTI 351
P +LQHIE+ N+ DI Y+VLDEADT+FDRGFGPEI K L PL ALK+N QGFQT+
Sbjct: 247 PGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTV 306
Query: 352 LVTA----AIAEMLGEQLSSL 368
LVTA A+ +++ E+ +
Sbjct: 307 LVTATMTMAVQKLVDEEFQGI 327
>sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum
GN=helA PE=3 SV=1
Length = 1091
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%), Gaps = 33/220 (15%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQV 202
FQ + L ++KA+ K G VP+ IQ IP +L+G +V + +GSG+T A+++P++Q
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 203 YSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCAR 262
H VG+ RA++L T E A Q F + K S +
Sbjct: 292 LGD-----HSTTVGV------------------RAVILSPTRELAIQTFKVVKDFSQGTQ 328
Query: 263 LDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLF 321
L + + GG S D++ P ++IATP ++ H+ + +S ++Y+V DEAD LF
Sbjct: 329 LRTILIVGGDSMEDQFTDLARNP-DIIIATPGRLMHHLLETGMSLSKVQYIVFDEADRLF 387
Query: 322 DRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEML 361
+ GF ++++IL+ L ++ QT+L +A + +L
Sbjct: 388 EMGFNEQLTEILSKLSENR--------QTLLFSATLPSLL 419
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 111/198 (56%), Gaps = 25/198 (12%)
Query: 138 EVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLL 197
E + +F+EL L ++KAV+K+G P+ IQ IP LNGK ++ S+ +GSG+T A+LL
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 198 PLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFI 257
P+++ ++L RD + R ++L T E A Q + + +
Sbjct: 247 PVLE-----------------RLLFRDSEYRAI-----RVLILLPTRELALQCQSVMENL 284
Query: 258 SHCARLDSSMENGGVSSKALE-DVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLD 315
+ + + S + GG+S+KA E ++ +P ++IATP ++ H+ + + DD+ ++LD
Sbjct: 285 AQFSNITSCLIVGGLSNKAQEVELRKSP-DVVIATPGRLIDHLLNAHGIGLDDLEILILD 343
Query: 316 EADTLFDRGFGPEISKIL 333
EAD L D GF EI+KI+
Sbjct: 344 EADRLLDMGFKDEINKIV 361
>sp|P44701|SRMB_HAEIN ATP-dependent RNA helicase SrmB homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=srmB PE=3
SV=1
Length = 439
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 21/193 (10%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+S F++ L E++KA+EK G P+ IQ IPA + V+ S+ +G+G+T A+LLP
Sbjct: 3 LSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPA 62
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
+Q HL RR KP PR +VL T E A Q A+ ++
Sbjct: 63 LQ---------HL-----LDYPRR-------KPGPPRILVLTPTRELAMQVAEQAEELAQ 101
Query: 260 CARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADT 319
L+ + GGV+ + DV N +++ATP +LQ+I++ N C + ++ DEAD
Sbjct: 102 FTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADR 161
Query: 320 LFDRGFGPEISKI 332
+ GFG + KI
Sbjct: 162 MLQMGFGQDAEKI 174
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 125/242 (51%), Gaps = 40/242 (16%)
Query: 122 LSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSV 181
L N +E ++ ++A +FQEL L ++K+++++G VP+ +Q IP L GK +
Sbjct: 177 LDNFYESQETNTSASALKSKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDI 236
Query: 182 VLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMK-PMHPRAIVL 240
V S+ +GSG+T AYL+P++ E LL +K +AI+L
Sbjct: 237 VASAQTGSGKTAAYLIPII------------------------ERLLYVKNSTSTKAIIL 272
Query: 241 CTTEESA----DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVL 296
T E A D G + +F+S+ L+ M GG+S K E ++IATP ++
Sbjct: 273 TPTRELAIQVHDVGRKLGQFVSN---LNFGMAVGGLSLKQQEQQLKTRPDIVIATPGRLI 329
Query: 297 QHIEDR-NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTA 355
HI + + S +D++ +++DEAD + + GF E+++IL+ + Q QT+L +A
Sbjct: 330 DHIRNSPSFSVEDVQVLIIDEADRMLEEGFQEELTEILSLIPK-------QKRQTLLFSA 382
Query: 356 AI 357
+
Sbjct: 383 TM 384
>sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
japonica GN=Os08g0416100 PE=2 SV=2
Length = 851
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 47/259 (18%)
Query: 109 ENKPSPPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQ 168
E+KP P +P+++ AS+R+ SG F+ +GL E+ + V G VP+ IQ
Sbjct: 26 EHKPLPGRPKRE--GEGASKRKAKSGG-------FESMGLCEEVYRGVRHKGYRVPTPIQ 76
Query: 169 CVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALL 228
+P +L G + + +GSG+T A+L+P++ Q LRR +A
Sbjct: 77 RKAMPLILAGHDIAAMARTGSGKTAAFLVPMI------------------QRLRRHDAGA 118
Query: 229 PMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKA-LEDVSNAPIGM 287
+ RA++L T + A Q A+ + L S+ GG S ++ E+++ P +
Sbjct: 119 GI-----RALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP-DI 172
Query: 288 LIATPSEVLQH---IEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSN 344
+IATP ++ H +ED N+ + YVV DEAD+LF G ++ IL+ L D+
Sbjct: 173 IIATPGRLVHHLAEVEDLNLRT--VEYVVFDEADSLFSLGLIQQLHDILHKLSDTR---- 226
Query: 345 GQGFQTILVTAAIAEMLGE 363
QT+L +A + + L +
Sbjct: 227 ----QTLLFSATLPQALAD 241
>sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
indica GN=OsI_028228 PE=2 SV=2
Length = 851
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 47/259 (18%)
Query: 109 ENKPSPPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQ 168
E+KP P +P+++ AS+++ SG F+ +GL E+ + V G VP+ IQ
Sbjct: 26 EHKPPPGRPKRE--GEGASKKKAKSGG-------FESMGLCEEVYRGVRHKGYRVPTPIQ 76
Query: 169 CVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALL 228
+P +L G + + +GSG+T A+L+P++ Q LRR +A
Sbjct: 77 RKAMPLILAGHDIAAMARTGSGKTAAFLVPMI------------------QRLRRHDAGA 118
Query: 229 PMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKA-LEDVSNAPIGM 287
+ RA++L T + A Q A+ + L S+ GG S ++ E+++ P +
Sbjct: 119 GI-----RALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP-DI 172
Query: 288 LIATPSEVLQH---IEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSN 344
+IATP ++ H +ED N+ + YVV DEAD+LF G ++ IL+ L D+
Sbjct: 173 IIATPGRLVHHLAEVEDLNLRT--VEYVVFDEADSLFSLGLIQQLHDILHKLSDTR---- 226
Query: 345 GQGFQTILVTAAIAEMLGE 363
QT+L +A + + L +
Sbjct: 227 ----QTLLFSATLPQALAD 241
>sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-10 PE=3 SV=1
Length = 934
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 38/245 (15%)
Query: 119 QQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNG 178
Q++ SNI + K G FQ +GL A +++A+ + G VP+ IQ IP +L
Sbjct: 84 QRKSSNIQGKSVKKGGG-------FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILER 136
Query: 179 KSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAI 238
K VV + +GSG+T A+++P+++ + H VG RA+
Sbjct: 137 KDVVGMARTGSGKTAAFVIPMIERL-----KGHSPRVG------------------SRAL 173
Query: 239 VLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQH 298
++ + E A Q + K + L + + GG S + + + ++IATP L
Sbjct: 174 IMSPSRELALQTLKVVKELGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHL 233
Query: 299 IEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIA 358
+ N+S I+YVV DEAD LF+ GF E+++IL+ L S QT+L +A +
Sbjct: 234 KVEMNLSLASIKYVVFDEADRLFEMGFATELTEILHALPPSR--------QTLLFSATLP 285
Query: 359 EMLGE 363
L E
Sbjct: 286 SSLVE 290
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ A +++ ++K G+ P+ IQ GIP +L+G+ ++ + +GSG+TL + LP+
Sbjct: 180 IKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
+ L++E L K P +++C + E A Q + ++
Sbjct: 240 IMFC--LEQEKRLPFS---------------KREGPYGLIICPSRELARQTHGILEYYCR 282
Query: 260 CARLDSS------MENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 313
+ DSS + GG+S K + + M++ATP ++ ++ + VS D RY+
Sbjct: 283 LLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLA 342
Query: 314 LDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAI 357
LDEAD + D GF +I I + K GQ QT+L +A +
Sbjct: 343 LDEADRMIDMGFEGDIRTIFSYFK-------GQ-RQTLLFSATM 378
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 31/224 (13%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ A +++ ++K G+ P+ IQ GIP +L+G+ ++ + +GSG+TL + LP+
Sbjct: 180 IKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
+ L++E L K P +++C + E A Q + ++
Sbjct: 240 IMFC--LEQEKRLPF---------------SKREGPYGLIICPSRELARQTHGILEYYCR 282
Query: 260 CARLDSS------MENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 313
+ DSS + GG+S K + + M++ATP ++ ++ + VS D RY+
Sbjct: 283 LLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLA 342
Query: 314 LDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAI 357
LDEAD + D GF +I I + K GQ QT+L +A +
Sbjct: 343 LDEADRMIDMGFEGDIRTIFSYFK-------GQ-RQTLLFSATM 378
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 35/241 (14%)
Query: 126 ASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVL 183
A+ R+ S+ G + FQ LGL A ++KA+ + G VP+ IQ IP VL+ + VV
Sbjct: 69 AANRKASNLRGRTVKKGGGFQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVG 128
Query: 184 SSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTT 243
+ +GSG+T A+++P+++ + H G RA++L +
Sbjct: 129 MARTGSGKTAAFVIPMIEKL-----KSHSAKFG------------------SRALILSPS 165
Query: 244 EESADQGFHMAKFISHCARLDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHIEDR 302
E A Q + K + L S + GG S + E +++ P ++IATP L +
Sbjct: 166 RELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFEYMASNP-DIIIATPGRFLHLKVEM 224
Query: 303 NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLG 362
++ IRYVV DEAD LF+ GF ++++IL+ L S QT+L +A + + L
Sbjct: 225 SLDLSSIRYVVFDEADRLFEMGFATQLTEILHGLPSSR--------QTLLFSATLPKSLV 276
Query: 363 E 363
E
Sbjct: 277 E 277
>sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=dbp10 PE=3 SV=1
Length = 869
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 39/260 (15%)
Query: 109 ENKPSPPQ----PEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVP 164
++K PP+ EQQ +N + K G + FQ +GL A ++KA+ + G VP
Sbjct: 36 KSKRQPPKKAFIAEQQTSANRKASNLK--GRTVKKGGGFQAMGLSANLLKAIARKGFSVP 93
Query: 165 SEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRD 224
+ IQ IP +++ + VV + +GSG+T A+++P+++ + H VG
Sbjct: 94 TPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKL-----KSHSTKVG-------- 140
Query: 225 EALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVS-SKALEDVSNA 283
R +VL + E A Q + K + L S + GG S + ++
Sbjct: 141 ----------ARGLVLSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGN 190
Query: 284 PIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKS 343
P ++IATP L + N+ IRYVV DEAD LF+ GF ++++IL+ L +
Sbjct: 191 P-DIIIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPANR--- 246
Query: 344 NGQGFQTILVTAAIAEMLGE 363
QT+L +A + + L E
Sbjct: 247 -----QTLLFSATLPKSLVE 261
>sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DRS1 PE=3 SV=1
Length = 771
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 30/226 (13%)
Query: 114 PPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
P + + ++ ++ E+++ + ++ ++FQ L L ++K + ++G PS IQ IP
Sbjct: 231 PVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIP 290
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPM 233
L GK +V + +GSG+T AY++P+++ ++L + P K
Sbjct: 291 IALLGKDIVAGAVTGSGKTAAYMIPIIE-----------------RLLYK-----PAKIS 328
Query: 234 HPRAIVLCTTEESA----DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLI 289
R IVL T E A D G + +F+++ L+ + GG++ + E ++I
Sbjct: 329 STRVIVLAPTRELAIQVCDVGKKIGQFVNN---LNFGLAVGGLNLRQQEQQLKTRPDIVI 385
Query: 290 ATPSEVLQHIEDR-NVSCDDIRYVVLDEADTLFDRGFGPEISKILN 334
ATP ++ HI + + S D + +V+DEAD + D GF E+++IL+
Sbjct: 386 ATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILS 431
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 34/241 (14%)
Query: 126 ASEREKSSGSNAEVV---SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVV 182
AS K+S V FQ +GL A ++KA+ + G VP+ IQ IP +++G+ VV
Sbjct: 71 ASANRKASNLKGRTVKKGGGFQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVV 130
Query: 183 LSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCT 242
+ +GSG+T A+++P+++ + H VG R ++L
Sbjct: 131 GMARTGSGKTAAFVIPMIEKL-----KSHSTKVG------------------ARGLILSP 167
Query: 243 TEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR 302
+ E A Q + K + L S + GG S + + ++IATP L +
Sbjct: 168 SRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEM 227
Query: 303 NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLG 362
N+ IRYVV DEAD LF+ GF ++++IL L + QT+L +A + + L
Sbjct: 228 NLDLSSIRYVVFDEADRLFEMGFADQLTEILYGLPANR--------QTLLFSATLPKSLV 279
Query: 363 E 363
E
Sbjct: 280 E 280
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
+F EL L +KA+E+MG +EIQ GIP +L GK V+ ++ +GSG+TLA+L+P V
Sbjct: 113 AFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAV- 171
Query: 202 VYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHC 260
+MLR L KP + +++ + T E A Q F +A+ +
Sbjct: 172 -----------------EMLRS----LKFKPRNGTGVIVVSPTRELALQIFGVARDLMKH 210
Query: 261 ARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTL 320
+ GG + +A + + + +LIATP +L H+++ ++R +V+DEAD +
Sbjct: 211 HSQTYGIVIGGANRRAEAEKLSKGVNLLIATPGRLLDHLQNTPFVFKNLRSLVIDEADRI 270
Query: 321 FDRGFGPEISKILNPL 336
+ GF E+ +I+ L
Sbjct: 271 LEIGFEDEMRQIIKIL 286
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 25/203 (12%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
F++L L M++ + + G+ P+ IQ G+P VL+G+ ++ + +GSG+TL ++LPL+
Sbjct: 183 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 242
Query: 202 VYSQLDEEHHLQLVGITQMLRRDEALLPMKPMH-PRAIVLCTTEESADQGFH-MAKFI-- 257
V Q +E ++P+ P P +++C + E A Q + + +F+
Sbjct: 243 VALQ------------------EEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVP 284
Query: 258 ---SHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVL 314
+ + + GGV +A DV + +++ATP + + + ++ D+ RY+ L
Sbjct: 285 LKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTL 344
Query: 315 DEADTLFDRGFGPEISKILNPLK 337
DEAD L D GF +I ++ + K
Sbjct: 345 DEADRLVDLGFEDDIREVFDHFK 367
>sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp.
japonica GN=Os03g0108600 PE=2 SV=2
Length = 641
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
SF+E+G E++ A+ G PS IQ + VL GKS ++ SGSG+TLAYL P+V
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVV- 299
Query: 202 VYSQLDEEHHLQLVGITQMLRRD--EALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
Q LR++ E L P +PR +VL T E A Q + + IS
Sbjct: 300 -----------------QNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISK 342
Query: 260 CAR-LDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEAD 318
S + GG K + + + +LIATP L +++ V +++R VVLDE D
Sbjct: 343 SGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVD 402
Query: 319 TLF 321
L+
Sbjct: 403 ILY 405
>sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DRS1 PE=3 SV=3
Length = 741
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 112/214 (52%), Gaps = 31/214 (14%)
Query: 126 ASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSS 185
A E+E S + ++V ++FQ L L ++K + ++G PS IQ IP L G+ +V +
Sbjct: 208 ADEKETKS-AKSQVHTTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGRDIVAGA 266
Query: 186 GSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEE 245
+GSG+T AY++P+++ ++L + P K R IVL T E
Sbjct: 267 VTGSGKTAAYMIPIIE-----------------RLLYK-----PSKVASTRVIVLTPTRE 304
Query: 246 SA----DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED 301
A D G + +F+++ L+ + GG++ + E + ++IATP ++ HI +
Sbjct: 305 LAIQVGDVGKKIGQFVNN---LNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRN 361
Query: 302 R-NVSCDDIRYVVLDEADTLFDRGFGPEISKILN 334
+ S D + +V+DEAD + D GF E+++IL+
Sbjct: 362 SPSFSIDSLEVLVIDEADRMLDEGFQVELTEILS 395
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 43/234 (18%)
Query: 116 QPEQQQLSNIASEREKSSGSNAEV---------VSSFQELGLKAEMIKAVEKMGLFVPSE 166
+ E +Q I+ E S+ + AE ++SFQ L L ++K V +G VPS
Sbjct: 164 ESEDEQEQEISENDEDSAAAIAEFYEESKTTEKITSFQALQLSRPLLKGVGNLGYTVPSA 223
Query: 167 IQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ--VYSQLDEEHHLQLVGITQMLRRD 224
IQ IP + GK +V + +GSG+T AYL+P+++ +Y
Sbjct: 224 IQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYK-------------------- 263
Query: 225 EALLPMKPMHPRAIVLCTTEESA----DQGFHMAKFISHCARLDSSMENGGVSSKALEDV 280
P R IVL T E A D G + +F+ A L+ + GG++ + E
Sbjct: 264 ----PAAVSATRVIVLTPTRELAIQVCDVGKKLGQFV---ANLNFGLAVGGLNLRQQEQQ 316
Query: 281 SNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEADTLFDRGFGPEISKIL 333
+ +++ATP ++ HI + + S +++ +V+DEAD + + GF E+++IL
Sbjct: 317 LKSRPDIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVELTEIL 370
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
V +F++ G ++++ A++K P+ IQC +P VL+G+ V+ + +GSG+T A++LP+
Sbjct: 227 VKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPM 286
Query: 200 -VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS 258
V + Q + L+RDE P ++ T E A Q F AK S
Sbjct: 287 IVHIMDQPE-------------LQRDEG--------PIGVICAPTRELAHQIFLEAKKFS 325
Query: 259 HCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEAD 318
L S GG+S A +++ATP ++ ++ + ++ Y+VLDEAD
Sbjct: 326 KAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEAD 385
Query: 319 TLFDRGFGPEISKILNPLK 337
+FD GF P++ I+ ++
Sbjct: 386 RMFDLGFEPQVRSIVGQIR 404
>sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster
GN=abs PE=1 SV=1
Length = 619
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 37/285 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ ++ + G+ P+ IQ G+P VL G+ ++ + +GSG+TL ++LP+
Sbjct: 176 IRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPV 235
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGF----HMAK 255
+ L++E+ L R+E P +++C + E A Q H +K
Sbjct: 236 IMF--ALEQEYSLP-------FERNEG--------PYGLIICPSRELAKQTHEIIQHYSK 278
Query: 256 FISHCA--RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 313
+ C + S + GG+ DV + + +++ATP ++ ++ + ++ D RY+
Sbjct: 279 HLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLC 338
Query: 314 LDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGEQLSSLMECLE 373
+DEAD + D GF ++ I + K GQ QT+L +A + + + S +
Sbjct: 339 MDEADRMIDMGFEEDVRTIFSFFK-------GQR-QTLLFSATMPKKIQNFARSALVKPV 390
Query: 374 RDNAGKVTAMLLEMDQAEVFDLTESQDALKKKVVEAMDSLHLSAP 418
N G+ A + + Q + E+ KVV +D L +AP
Sbjct: 391 TINVGRAGAASMNVTQQVEYVKQEA------KVVYLLDCLQKTAP 429
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 40/244 (16%)
Query: 126 ASEREKSSGSNAEVV---SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVV 182
AS K+S V FQ +GL A ++KA+ + G VP+ IQ IP ++ + VV
Sbjct: 72 ASANRKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVV 131
Query: 183 LSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCT 242
+ +GSG+T A+++P++Q + H VG R ++L
Sbjct: 132 GMARTGSGKTAAFVIPMIQKL-----KSHSTQVG------------------ARGLILSP 168
Query: 243 TEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIG---MLIATPSEVLQHI 299
+ E A Q + K + L + + GG S LE+ + G ++IATP L
Sbjct: 169 SRELALQTLKVVKELGKGTDLKAVLLVGGDS---LEEQFSMMAGNPDIVIATPGRFLHLK 225
Query: 300 EDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAE 359
+ N+ IRYVV DEAD LF+ GF ++++IL+ L + QT+L +A + +
Sbjct: 226 VEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPSTR--------QTLLFSATLPK 277
Query: 360 MLGE 363
L E
Sbjct: 278 SLVE 281
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLP- 198
V++F E G ++K V++ G P+ IQC G P L G+ V+ + +GSG+TL+Y LP
Sbjct: 115 VTNFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPA 174
Query: 199 LVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS 258
+V + +Q ML + P +VL T E A Q
Sbjct: 175 IVHINAQ-------------PMLSHGDG--------PIVLVLAPTRELAVQIQQECSKFG 213
Query: 259 HCARLDSSMENGGV-SSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEA 317
+++ ++ GGV + + D++ + ++IATP +L +E + + Y+VLDEA
Sbjct: 214 KSSKIRNTCVYGGVPRGQQIRDLARG-VEIVIATPGRLLDMLESGKTNLRRVTYLVLDEA 272
Query: 318 DTLFDRGFGPEISKILNPLK 337
D + D GF P+I KI++ ++
Sbjct: 273 DRMLDMGFEPQIRKIVDQIR 292
>sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10
PE=3 SV=1
Length = 934
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 116/246 (47%), Gaps = 33/246 (13%)
Query: 118 EQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLN 177
EQQ +N + K G + FQ +GL A ++KA+ + G VP+ IQ IP +++
Sbjct: 69 EQQTSANRKASNLK--GRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMD 126
Query: 178 GKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRA 237
+ VV + +GSG+T A+++P+++ + H VG R
Sbjct: 127 DQDVVGMARTGSGKTAAFVIPMIEKL-----KSHSTKVG------------------ARG 163
Query: 238 IVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQ 297
++L + E A Q + K + L S + GG S + + ++IATP L
Sbjct: 164 LILSPSRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLH 223
Query: 298 HIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAI 357
+ N+ IRYVV DEAD LF+ GF ++++IL+ L + QT+L +A +
Sbjct: 224 LKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPANR--------QTLLFSATL 275
Query: 358 AEMLGE 363
+ L E
Sbjct: 276 PKSLVE 281
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 32/236 (13%)
Query: 126 ASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSS 185
++ R K N + S+FQ +GL +++A+ K G P+ IQ IP +L G+ VV +
Sbjct: 55 SNRRTKGKKGNGKA-SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMA 113
Query: 186 GSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEE 245
+GSG+T A+++P+++ HL+ + + RA++L E
Sbjct: 114 RTGSGKTAAFVIPMIE---------HLKST--------------LANSNTRALILSPNRE 150
Query: 246 SADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVS 305
A Q + K S L S GGVS + + + +++ATP L + +
Sbjct: 151 LALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLE 210
Query: 306 CDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEML 361
I YVV DEAD LF+ GF ++++IL+ L S QT+L +A + L
Sbjct: 211 LSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSR--------QTLLFSATLPRTL 258
>sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31
PE=1 SV=2
Length = 851
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 141 SSFQELGLKAEMIKAVEK-MGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
++F ELGL +I + + + + +Q IP +L G+ ++ S +GSG+TLAY +P+
Sbjct: 230 AAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPV 289
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFH-MAKFIS 258
VQ L + ++R + P A+VL T E A Q F + K +
Sbjct: 290 VQ-----------SLQAMESKIQRSDG--------PYALVLVPTRELALQSFDTVQKLLK 330
Query: 259 HCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEA 317
+ + GG K+ + I +LI+TP ++ HI+ +N+ +R++V DEA
Sbjct: 331 PFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEA 390
Query: 318 DTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAE 359
D + D GF +I+ ILN A+ + Q Q +L++A + E
Sbjct: 391 DRILDLGFEKDITVILN-----AVNAECQKRQNVLLSATLTE 427
>sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=DBP10 PE=3 SV=1
Length = 762
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 41/250 (16%)
Query: 118 EQQQLSNIASEREKSSGS----NAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
+QQ+ SN + +GS +A+ FQ +GL + +++A+ + G VP+ IQ IP
Sbjct: 65 KQQRSSN------RKTGSLQSKSAKKSGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIP 118
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPM 233
VL + VV + +GSG+T A+++P+++ + H VG
Sbjct: 119 LVLERRDVVGMARTGSGKTAAFVIPMIERL-----KAHSARVGA---------------- 157
Query: 234 HPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPS 293
RAI++ + E A Q + K + L + + GG S + + A ++IATP
Sbjct: 158 --RAIIMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPG 215
Query: 294 EVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILV 353
L + +++ +RYVV DEAD LF+ GF ++++IL+ L S QT+L
Sbjct: 216 RFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSR--------QTLLF 267
Query: 354 TAAIAEMLGE 363
+A + L E
Sbjct: 268 SATLPSSLVE 277
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 23/203 (11%)
Query: 135 SNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLA 194
S A + F EL L + +KA+ +MG +EIQ GIP +L GK V+ ++ +GSG+TLA
Sbjct: 101 SIATNATDFSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLA 160
Query: 195 YLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPR-AIVLCTTEESADQGFHM 253
+L+P +++ S L KP + AIV+ T E A Q F +
Sbjct: 161 FLIPAIEMLSS----------------------LRFKPRNGTGAIVVTPTRELALQIFGV 198
Query: 254 AKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 313
A+ + + GG + +A + + +LIATP +L H+++ ++R ++
Sbjct: 199 ARELMKNHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQNTPFVFKNMRSLI 258
Query: 314 LDEADTLFDRGFGPEISKILNPL 336
+DEAD + + GF E+ +I+ L
Sbjct: 259 IDEADRILEIGFEDEMRQIIKIL 281
>sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium
discoideum GN=ddx41 PE=1 SV=1
Length = 671
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 133/286 (46%), Gaps = 38/286 (13%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+++F+E+ + +I + + G+ PS IQ G+P +L+G+ ++ + +GSG+TL + LP+
Sbjct: 221 ITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPM 280
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
V L+EE L ++ + P ++LC + E A Q + + ++
Sbjct: 281 --VLFALEEECKLPII---------------QGEGPFGLILCPSRELARQTYDLVNSFTN 323
Query: 260 C-------ARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYV 312
+L + + GG+ + E + + M+IATP +L + + ++ +Y+
Sbjct: 324 ALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYL 383
Query: 313 VLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGEQLSSLMECL 372
LDEAD L D GF +I +L+ + QT+L +A + + + E S +
Sbjct: 384 GLDEADRLIDLGFEDDIRSVLDNFTNQR--------QTLLFSATMPKKIQEFARSALVLP 435
Query: 373 ERDNAGKVTAMLLEMDQAEVFDLTESQDALKKKVVEAMDSLHLSAP 418
N G+ A L + Q F E+ K+V ++ L + P
Sbjct: 436 VEVNVGRAGAANLNVTQEVEFVKPEA------KIVYLLECLQKTPP 475
>sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain
RS) GN=DBP10 PE=3 SV=1
Length = 927
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQV 202
FQ +GL A ++KA+ + G VP+ IQ IP VL+ + VV + +GSG+T A+++P+++
Sbjct: 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 142
Query: 203 YSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCAR 262
+ H VG R ++L + E A Q + K +
Sbjct: 143 L-----KSHSTKVG------------------SRGLILSPSRELALQTLKVVKELGRGTD 179
Query: 263 LDSSMENGGVSSKALEDVSNAPIG---MLIATPSEVLQHIEDRNVSCDDIRYVVLDEADT 319
L + GG S LE+ G ++IATP L + N+ I+YVV DEAD
Sbjct: 180 LKCVLLVGGDS---LEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSSIKYVVFDEADR 236
Query: 320 LFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 363
LF+ GF ++++IL+ L Q QT+L +A + + L E
Sbjct: 237 LFEMGFAAQLTEILHGLP--------QSRQTLLFSATLPKSLVE 272
>sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp7 PE=3 SV=1
Length = 709
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 41/233 (17%)
Query: 118 EQQQLSNIASEREKSSGSNAEV-VSSFQELGLKAEMIKAVE-KMGLFVPSEIQCVGIPAV 175
E Q+SNI + +E SNA + ++F + L ++ + KM + P+ IQ +PA+
Sbjct: 117 EDNQISNIGTTKE---ASNAPIKTTNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPAL 173
Query: 176 LN--GKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPM 233
LN K + + +GSG+TLAYLLP+VQ +L + H + GI
Sbjct: 174 LNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIY--------------- 218
Query: 234 HPRAIVLCTTEESADQGFHMAK---------FISHCARLDSSMENGGVSSKALEDVSNAP 284
A+++ T E Q +++A +I C + GG K+ +
Sbjct: 219 ---AVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVI------GGEKKKSEKARIRKG 269
Query: 285 IGMLIATPSEVLQHIEDRN-VSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 336
+ +LI TP + H+E+ + +R+VVLDE D L D GF ++KIL+ L
Sbjct: 270 VNILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYL 322
>sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DRS1 PE=3 SV=1
Length = 613
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 141 SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLV 200
+SFQ L L ++K + ++ P+ IQ IP L GK +V + +GSG+T AY++P++
Sbjct: 130 TSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII 189
Query: 201 QVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS-H 259
E LL + I+L T E A Q + K +S H
Sbjct: 190 ------------------------ERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHH 225
Query: 260 CARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEAD 318
L+ + GG++ + E+ ++IATP ++ HI + + S DI+ +V+DEAD
Sbjct: 226 VNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEAD 285
Query: 319 TLFDRGFGPEISKILN 334
+ + GF E+++IL+
Sbjct: 286 RMLEEGFQDELTEILS 301
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ S++E L +E++KAVE+ G PS IQ IP L + V+ + +GSG+T A++LP+
Sbjct: 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371
Query: 200 VQVYSQL---DEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQ-GFHMAK 255
+ S+L EE+ + P A+V+ T E A Q K
Sbjct: 372 LAYISRLPPMSEENETE--------------------GPYAVVMAPTRELAQQIEEETVK 411
Query: 256 FISHCA-RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVL 314
F + R+ S + + + L+ I +IATP ++ +E R + YVVL
Sbjct: 412 FAHYLGFRVTSIVGGQSIEEQGLKITQGCEI--VIATPGRLIDCLERRYAVLNQCNYVVL 469
Query: 315 DEADTLFDRGFGPEISKILNPLKDSALK 342
DEAD + D GF P+++ +L+ + S LK
Sbjct: 470 DEADRMIDMGFEPQVAGVLDAMPSSNLK 497
>sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2
Length = 881
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 46/252 (18%)
Query: 116 QPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAV 175
+P+ +++ ++++K SG FQ +GL + K + K G VP+ IQ IP +
Sbjct: 78 EPDTREMVRAQNKKKKKSGG-------FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 176 LNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHP 235
L+GK VV + +GSG+T +LLP+ + + H Q
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERL----KTHSAQ-------------------TGA 167
Query: 236 RAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNA----PIGMLIAT 291
RA++L T E A Q K + L +++ GG +ED A P ++IAT
Sbjct: 168 RALILSPTRELALQTLKFTKELGKFTGLKTALILGG---DRMEDQFAALHENP-DIIIAT 223
Query: 292 PSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTI 351
P ++ + ++ + YVV DEAD LF+ GF ++ +I+ L G QT+
Sbjct: 224 PGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPG--------GHQTV 275
Query: 352 LVTAAIAEMLGE 363
L +A + ++L E
Sbjct: 276 LFSATLPKLLVE 287
>sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis
thaliana GN=RH29 PE=3 SV=1
Length = 845
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 34/223 (15%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQV 202
F+ L L + A++K G VP+ IQ +P +L+G VV + +GSG+T A+L+P+++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 203 YSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCAR 262
Q H+ G+ RA++L T + A+Q K +
Sbjct: 90 LKQ-----HVPQGGV------------------RALILSPTRDLAEQTLKFTKELGKFTD 126
Query: 263 LDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHI-EDRNVSCDDIRYVVLDEADTL 320
L S+ GG S E+++ P ++IATP ++ + E +++ + YVV DEAD+L
Sbjct: 127 LRVSLLVGGDSMEDQFEELTKGP-DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSL 185
Query: 321 FDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 363
F GF ++ +IL L ++ QT+L +A + L E
Sbjct: 186 FGMGFAEQLHQILTQLSENR--------QTLLFSATLPSALAE 220
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 24/200 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLP- 198
V SF+++G +++ V+K G P+ IQ G P + G+ ++ + +GSG+TL+YLLP
Sbjct: 98 VKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPA 157
Query: 199 LVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS 258
+V V +Q ML + P +VL T E A Q A
Sbjct: 158 IVHVNAQ-------------PMLAHGDG--------PIVLVLAPTRELAVQIQQEASKFG 196
Query: 259 HCARLDSSMENGGV-SSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEA 317
+++ ++ GGV + D+ + ++IATP ++ +E N + + Y+VLDEA
Sbjct: 197 SSSKIKTTCIYGGVPKGPQVRDLQKG-VEIVIATPGRLIDMMESNNTNLRRVTYLVLDEA 255
Query: 318 DTLFDRGFGPEISKILNPLK 337
D + D GF P+I KI++ ++
Sbjct: 256 DRMLDMGFDPQIRKIVSHIR 275
>sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa, isoform A OS=Drosophila
melanogaster GN=vas PE=1 SV=3
Length = 661
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 34/234 (14%)
Query: 114 PPQPEQQQL----SNIASEREKSSGSNAEV----------VSSFQELGLKAEMIKAVEKM 159
PP+P + S IAS S +N V + F L+ +I V K
Sbjct: 204 PPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKS 263
Query: 160 GLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQ 219
G +P+ IQ IP + +G+ ++ + +GSG+T A+LLP++ L++ H L+L
Sbjct: 264 GYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILS--KLLEDPHELEL----- 316
Query: 220 MLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALED 279
P+ +++ T E A Q F+ A+ + + L + GG S + +
Sbjct: 317 -------------GRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNE 363
Query: 280 VSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKIL 333
++IATP +L ++ ++ +D R+VVLDEAD + D GF ++ +I+
Sbjct: 364 CITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIM 417
>sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP2 PE=3 SV=1
Length = 552
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLP- 198
++SF E G ++ ++ G P+ IQC G P L+G+ +V + +GSG+TL+Y LP
Sbjct: 115 ITSFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 174
Query: 199 LVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQ-GFHMAKFI 257
+V + +Q +L+R + P +VL T E A Q +KF
Sbjct: 175 IVHINAQ-------------PLLKRGDG--------PIVLVLAPTRELACQIQTECSKFG 213
Query: 258 SHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEA 317
+ ++ + G + D++N + + IATP ++ +E + + Y+VLDEA
Sbjct: 214 ASSRIRNTCVYGGAPKGPQIRDLANG-VEICIATPGRLIDMLEAGKTNLKRVTYLVLDEA 272
Query: 318 DTLFDRGFGPEISKILNPLK 337
D + D GF P+I KI++ ++
Sbjct: 273 DRMLDMGFEPQIRKIVDQIR 292
>sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel
PE=1 SV=1
Length = 798
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 16/231 (6%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLF-VPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLP 198
++SF ++ L E+I+ + + P+ +Q IP ++NG+ ++ + +GSG+T A+L+P
Sbjct: 294 ITSFDDVQL-TEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVP 352
Query: 199 LVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS 258
++ +Q+ E H+ T+ R + +P +VL T E A Q F AK +
Sbjct: 353 IL---NQMYELGHVPPPQSTRQYSR-------RKQYPLGLVLAPTRELATQIFEEAKKFA 402
Query: 259 HCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEAD 318
+ +R+ ++ GG ++ + +++ATP + I V ++IR++VLDEAD
Sbjct: 403 YRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEAD 462
Query: 319 TLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGEQLSSLM 369
+ D GF P+I +I+ L + GQ QT++ +A + + E S +
Sbjct: 463 RMLDMGFEPQIRRIVEQLN---MPPTGQ-RQTLMFSATFPKQIQELASDFL 509
>sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorhabditis elegans GN=glh-3
PE=1 SV=1
Length = 720
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
SF + + M + VE+ G + IQ +P V +GK ++ + +GSG+T A+LLP++
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM- 357
Query: 202 VYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCA 261
S+L +L +D +PR I+L T E ADQ ++ + S+ +
Sbjct: 358 --SRL-------------ILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
Query: 262 RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLF 321
++ GG++ + +++ T V ED + D RY+VLDEAD +
Sbjct: 403 VMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMI 462
Query: 322 DR-GFGPEISKILN 334
D GFGPEI +I+N
Sbjct: 463 DSMGFGPEIEQIIN 476
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
F+ GL +++ V + G P+ +Q +P L G+ ++ + +GSG+T A+ LP+V
Sbjct: 85 GFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVS 144
Query: 202 VYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCA 261
L G + + R+ + PRA+VL T E A Q AK S
Sbjct: 145 ---------GLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFSFQT 195
Query: 262 RLDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTL 320
L + GG L D+ +L+ATP ++ +E VS + I+Y+V+DEAD +
Sbjct: 196 GLRVVVAYGGTPMYNQLRDLERGA-DILVATPGRLVDMVERSKVSLEAIKYLVMDEADRM 254
Query: 321 FDRGFGPEISKIL 333
D GF P+I KI+
Sbjct: 255 LDMGFEPQIRKIV 267
>sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DRS1 PE=3 SV=1
Length = 725
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 30/210 (14%)
Query: 132 SSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGR 191
S + EV +F +L L ++K + +G PS IQ IP L GK ++ + +GSG+
Sbjct: 197 SENAKKEVHKTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGK 256
Query: 192 TLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEE----SA 247
T A+++P+++ ++L + P K R IVL T E A
Sbjct: 257 TAAFMIPIIE-----------------RLLYK-----PAKVASTRVIVLTPTRELAIQVA 294
Query: 248 DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSC 306
D G + +F+S+ L + GG++ + E + ++IATP + HI + + +
Sbjct: 295 DVGKKIGQFVSN---LTFGLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNV 351
Query: 307 DDIRYVVLDEADTLFDRGFGPEISKILNPL 336
D + +V+DEAD + + GF E+++I++ L
Sbjct: 352 DSVEVLVIDEADRMLEDGFQDELNEIMSLL 381
>sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=has1 PE=3 SV=1
Length = 576
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 24/196 (12%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQV 202
F EL L +KA+ +MG +EIQ IP L G+ ++ ++ +GSG+TLA+L+P V++
Sbjct: 100 FDELNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEM 159
Query: 203 YSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHCA 261
S L KP + +++ T T E A Q F +AK +
Sbjct: 160 LSALR----------------------FKPRNGTGVIIITPTRELALQIFGVAKELCEFH 197
Query: 262 RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTL 320
+ GG + +A + N + +LIATP +L H+++ + + + +VLDEAD
Sbjct: 198 SQTYGIVIGGANRRAEAEKLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRC 257
Query: 321 FDRGFGPEISKILNPL 336
D GF E+ +I+ L
Sbjct: 258 LDVGFEAELRQIVKIL 273
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ +F ++ + +++ ++ G+ P+ IQ G+P VL+G+ ++ + +GSG+TL ++LP+
Sbjct: 96 IKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPM 155
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMH-PRAIVLCTTEESADQGFHMA-KFI 257
+ + Q +E ++P+ P A+V+C + E A Q + + +F+
Sbjct: 156 IILALQ------------------EEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFV 197
Query: 258 SHCA-----RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYV 312
+ RL S + GGV ++ DV + +++ATP + + + +S D R +
Sbjct: 198 ASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLL 257
Query: 313 VLDEADTLFDRGFGPEISKILNPLK 337
LDEAD L D GF +I + + K
Sbjct: 258 TLDEADRLVDLGFEDDIRHVFDHFK 282
>sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp10 PE=3 SV=1
Length = 935
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 34/223 (15%)
Query: 119 QQQLSNIASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVL 176
QQQ S + R+ S+ G + FQ +GL A ++KA+ + G VP+ IQ IP ++
Sbjct: 68 QQQTS---ANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIM 124
Query: 177 NGKSVVLSSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPR 236
+ + VV + +GSG+T A+++P+++ H VG R
Sbjct: 125 DDQDVVGMARTGSGKTAAFVIPMIEKL-----RSHSTKVG------------------AR 161
Query: 237 AIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIG---MLIATPS 293
++L + E A Q + K + L + GG S LE+ G ++IATP
Sbjct: 162 GLILSPSRELALQTLKVVKELGKGTDLKCVLLVGGDS---LEEQFTMMAGNPDIVIATPG 218
Query: 294 EVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 336
L + N+ IRYVV DEAD LF+ GF ++++IL+ L
Sbjct: 219 RFLHLKVEMNLDLYSIRYVVFDEADRLFEMGFAAQLTEILHGL 261
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 31/224 (13%)
Query: 141 SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLV 200
SSFQ + L ++K + +G VP++IQ IP L GK +V ++ +GSG+T A+++P++
Sbjct: 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPIL 318
Query: 201 QVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHC 260
+ ++L R P K R ++LC T E A Q +A I+
Sbjct: 319 E-----------------RLLYR-----PKKVPTTRVLILCPTRELAMQCHSVATKIASF 356
Query: 261 ARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADT 319
+ + GG+S K E ++IATP + H+ + + + ++I +V+DEAD
Sbjct: 357 TDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADR 416
Query: 320 LFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 363
+ + GF E+++I+ S QT+L +A + + + +
Sbjct: 417 MLEDGFADELNEIIQACPKSR--------QTMLFSATMTDKVDD 452
>sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana
GN=RH17 PE=2 SV=1
Length = 609
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 142 SFQELGLKAEMIKAV-EKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLV 200
SF LGL ++ + E+MG P+ +Q IP +L+G+ V++++ +G+G+T+AYL PL+
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 201 QVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHC 260
HHLQ G + + R A+V+ T E Q + + + H
Sbjct: 90 ---------HHLQ--GHSPKVDRSHGTF--------ALVIVPTRELCLQVYETLEKLLHR 130
Query: 261 ARLDSSMENGGVSSKALEDVS-NAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEAD 318
G KA E I +LIATP +L H+++ + ++R+V+ DEAD
Sbjct: 131 FHWIVPGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEAD 190
Query: 319 TLFDRGFGPEISKILNPL 336
++ + G+G EI +I+ L
Sbjct: 191 SILELGYGKEIEQIIKLL 208
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 124 NIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVL 183
N + ++ S + + SF+ELGL ++ +A + MG P+ IQ IP L G+ ++
Sbjct: 35 NTTEQEQEPSEAPKQAPKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIG 94
Query: 184 SSGSGSGRTLAYLLPLVQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTT 243
+ +GSG+T A+ LP++Q L KP +VL T
Sbjct: 95 LAETGSGKTAAFALPILQA-------------------------LMDKPSSFFGLVLAPT 129
Query: 244 EESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED-R 302
E A Q + + + S++ GG+ + +++ATP +L H+E+ +
Sbjct: 130 RELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTK 189
Query: 303 NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 336
S +++Y+V+DEAD L D FGP + KIL L
Sbjct: 190 GFSLRNLKYLVMDEADRLLDMDFGPILDKILKVL 223
>sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium
discoideum GN=ddx42 PE=3 SV=1
Length = 986
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
V+SF G +++A+ K + P+ IQ IP L+G+ ++ + +GSG+T ++ P
Sbjct: 304 VTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPS 363
Query: 200 VQVYSQLDEEHHLQLVGITQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISH 259
+ S + ++ +L+ K P A+ L T E A Q + S
Sbjct: 364 I---SHIMDQPYLE-----------------KGDGPIALFLAPTRELAHQIYLETLKYSK 403
Query: 260 CARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADT 319
+L +++ GGVS + A +++ATP ++ I+ + + + Y+VLDEAD
Sbjct: 404 YFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADK 463
Query: 320 LFDRGFGPEISKILNPLK 337
+FD GFGP++ I+N ++
Sbjct: 464 MFDFGFGPQVLSIVNHVR 481
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,269,650
Number of Sequences: 539616
Number of extensions: 6156590
Number of successful extensions: 22726
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 19912
Number of HSP's gapped (non-prelim): 1752
length of query: 420
length of database: 191,569,459
effective HSP length: 120
effective length of query: 300
effective length of database: 126,815,539
effective search space: 38044661700
effective search space used: 38044661700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)