Query 014670
Match_columns 420
No_of_seqs 288 out of 2047
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 15:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014670.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014670hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hyo_A Fumarylacetoacetate hyd 100.0 3.5E-95 1.2E-99 745.7 31.9 415 3-419 2-418 (421)
2 3lzk_A Fumarylacetoacetate hyd 100.0 4.2E-68 1.4E-72 534.9 23.0 320 20-419 22-357 (359)
3 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 6.7E-59 2.3E-63 462.5 25.5 291 19-419 21-322 (329)
4 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 2E-56 6.7E-61 438.0 22.1 215 110-418 65-288 (288)
5 3rr6_A Putative uncharacterize 100.0 8.1E-55 2.8E-59 422.5 17.1 212 109-419 48-264 (265)
6 2dfu_A Probable 2-hydroxyhepta 100.0 2.4E-52 8.1E-57 405.8 21.7 214 111-419 33-260 (264)
7 1wzo_A HPCE; structural genomi 100.0 9.4E-52 3.2E-56 398.0 22.6 211 112-418 30-245 (246)
8 3l53_A Putative fumarylacetoac 100.0 1.4E-51 4.9E-56 391.5 18.8 189 115-361 3-199 (224)
9 3s52_A Putative fumarylacetoac 100.0 3.7E-51 1.3E-55 388.0 19.1 209 111-416 7-221 (221)
10 2q18_X 2-keto-3-deoxy-D-arabin 100.0 4.9E-50 1.7E-54 395.1 16.3 276 20-419 1-290 (293)
11 1saw_A Hypothetical protein FL 100.0 7.8E-48 2.7E-52 366.1 18.4 193 134-418 28-223 (225)
12 1gtt_A 4-hydroxyphenylacetate 100.0 5.4E-48 1.8E-52 398.8 17.9 212 110-418 208-425 (429)
13 1nkq_A Hypothetical 28.8 kDa p 100.0 1.1E-45 3.9E-50 357.8 17.4 205 121-415 4-243 (259)
14 1gtt_A 4-hydroxyphenylacetate 100.0 2.8E-44 9.5E-49 371.1 20.1 185 134-376 12-198 (429)
15 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 100.0 1.2E-37 4E-42 303.2 9.3 190 133-416 65-267 (267)
16 2wqt_A 2-keto-4-pentenoate hyd 100.0 1.6E-36 5.4E-41 295.6 15.4 186 128-418 60-263 (270)
17 2k52_A Uncharacterized protein 73.1 4 0.00014 31.2 4.3 64 342-408 1-68 (80)
18 2khj_A 30S ribosomal protein S 59.7 9.5 0.00033 30.8 4.3 64 342-408 27-98 (109)
19 3l53_A Putative fumarylacetoac 54.7 7.9 0.00027 35.8 3.4 14 385-400 197-210 (224)
20 1kl9_A Eukaryotic translation 53.6 8.9 0.00031 34.4 3.4 63 344-409 13-85 (182)
21 2k4k_A GSP13, general stress p 50.8 12 0.00041 31.4 3.6 64 342-408 3-74 (130)
22 1tyg_B YJBS; alpha beta barrel 46.0 23 0.0008 27.8 4.4 21 314-337 26-46 (87)
23 2a19_A EIF-2- alpha, eukaryoti 43.9 14 0.00049 32.7 3.1 62 345-409 14-85 (175)
24 3i4o_A Translation initiation 42.1 30 0.001 26.8 4.4 31 363-398 35-65 (79)
25 2k9x_A Tburm1, uncharacterized 40.8 20 0.00067 29.5 3.3 61 328-395 35-95 (110)
26 1f0z_A THis protein; ubiquitin 40.1 20 0.00069 26.1 3.0 20 314-337 6-25 (66)
27 2k5p_A THis protein, thiamine- 38.2 33 0.0011 26.2 4.0 12 385-396 52-63 (78)
28 2dgy_A MGC11102 protein; EIF-1 31.2 58 0.002 26.8 4.6 29 364-398 37-65 (111)
29 2khi_A 30S ribosomal protein S 30.9 32 0.0011 27.9 3.1 66 341-409 25-99 (115)
30 1q8k_A Eukaryotic translation 27.5 38 0.0013 32.9 3.3 63 344-409 11-83 (308)
31 1s4k_A Putative cytoplasmic pr 23.3 31 0.0011 28.9 1.5 25 219-248 16-40 (120)
32 3esi_A Uncharacterized protein 22.1 85 0.0029 26.3 4.1 26 384-409 75-100 (129)
33 3aev_A Translation initiation 20.7 62 0.0021 30.7 3.3 63 344-409 9-81 (275)
34 1ah9_A IF1, initiation factor 20.2 88 0.003 23.2 3.5 29 363-396 27-55 (71)
No 1
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=100.00 E-value=3.5e-95 Score=745.71 Aligned_cols=415 Identities=57% Similarity=1.048 Sum_probs=368.3
Q ss_pred cccccccCCCCCCCCCCCCeEEEeeCCCCCceeEEEECCeEEechhhhhcCCCCCCC-ccCCCccCcccHHHHHhCCchh
Q 014670 3 LQSFIEVEPDSHFPIQNLPYGVFKPEPASVARPGVAIGEYVLDLSEISKAGLFNGPI-LKDSDCFLQPNLNKFLSLGRPA 81 (420)
Q Consensus 3 ~~s~~~~~~~~~f~~~n~p~~~f~~~~~~~~r~Gv~~gd~viDL~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~g~~~ 81 (420)
.+|||+++.+++|||+|||||+|++..++.+|+||++||.|+||+++.. .+..+. ...++.|.+++|++||++|++.
T Consensus 2 ~~s~~~~~~~~~f~~~nlp~g~f~~~~~~~~r~Gv~igd~v~DL~~~~~--~~~~~~~~~~~~~~~~~tL~~~l~~g~~~ 79 (421)
T 1hyo_A 2 SMSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKH--LFTGPALSKHQHVFDETTLNNFMGLGQAA 79 (421)
T ss_dssp -CCSSCCCTTCSCCTTTCCEEEEECSSCCSCEEEEEETTEEEETTTTGG--GCCSTTTTTCGGGGGSSSSHHHHHHCHHH
T ss_pred CcccccCCCCCCCCccCceEEEEEeCCCCceEEEEEeCCEEEeHHHhHh--hcccccccccccccCCcCHHHHHhcChHH
Confidence 4799999999999999999999998777889999999999999987654 121111 0123467789999999999999
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhhcccccccCCCcEecCCcccCCcceEeecHHHHHHhccccCCCCCCCCCCCCCCce
Q 014670 82 WKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPI 161 (420)
Q Consensus 82 ~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~v~l~~P~~~~~~~~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~ 161 (420)
|.++|+.++++++...+.++++..+.....+++++|+|++|+.+++|+|||+|++|++|+++.+++++++.+|+|++.|+
T Consensus 80 ~~~~r~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ll~P~~~~~y~df~~~~~Ha~~~g~~~r~~~~~~~p~~~~~Pv 159 (421)
T 1hyo_A 80 WKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPV 159 (421)
T ss_dssp HHHHHHHHHHHHTTSSTHHHHCHHHHHHHEEESTTCEEECSSCCSCEEEECCCHHHHHHHHHHHHCGGGCSCTTTTTSCC
T ss_pred HHHHHHHHHHHhhccCccccccccccccccccHhHCeEcCCcccCcEEEEechHHHHHHHHhhhccccccCCCCcCCCCE
Confidence 99999999988765433333333333345789999999999999999999999999999998877776777899999999
Q ss_pred eeecCCceeeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchh
Q 014670 162 AYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSAR 241 (420)
Q Consensus 162 ~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaR 241 (420)
+|+|++||++++|++|.+|.+++++.++..|.+.++.++|||+||||||||.+++|++|++++|++||||||++||||+|
T Consensus 160 ~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG~~~~~g~~v~~~~A~~~I~Gy~l~ND~SaR 239 (421)
T 1hyo_A 160 GYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSAR 239 (421)
T ss_dssp EEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEECSCCCTTCCCCHHHHGGGEEEEEEEECCEEH
T ss_pred EEEcccceEEcCCCeEECCCCcccCccccccccccccCceEEEEEEEEECcccccCCCCCHHHHHHhhcEEEEEEeccHH
Confidence 99999999999999999999877655555577777999999999999999998889999999999999999999999999
Q ss_pred hhhhhhcCCCCCccccccCCCCCCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEec
Q 014670 242 DIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS 321 (420)
Q Consensus 242 d~Q~~~~~~lg~~~gKsfdt~iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~ 321 (420)
|+|.|+++++||++||+|+|+|||||||+|+++++++..++++|++++||.+.+++.++|++++++|++++.||+++|++
T Consensus 240 diQ~~e~~plg~~~aK~f~t~iGPwivt~d~l~p~~~~~~~~~~~~l~~l~~~~~~~~~l~l~~~vN~~~~~~Ge~~q~~ 319 (421)
T 1hyo_A 240 DIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRS 319 (421)
T ss_dssp HHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEECCCCCSSCCCGGGCCCSCCEECCEEEEEEECTTCSSCEEEEEE
T ss_pred hhhhhhcccCCCccccCcCCCCCCeecchhhcccccccccccCCcccccccccCCCccceEEEEEEecCCCCCCEEEEec
Confidence 99999999999999999999999999999999999998899999999999988888778888888766555559999999
Q ss_pred chhhhccCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCC-CCccCCCCCEEEEEEEEe
Q 014670 322 NFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGF-TRKFLEDGDEVTFTGFCK 400 (420)
Q Consensus 322 ~t~~m~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~-~~~~L~~GD~V~~~~~~~ 400 (420)
|+++|+|+++|||+|++|++|+|+|||||+||||+|+++.+.||.+|++++|++++++..+ +++|||+||+|+++++|+
T Consensus 320 ~~~~m~~~~~~lIa~lss~g~tL~pGDlI~TGTpsG~~~~~~G~~lE~~~~G~~~v~l~~g~~~~fL~~GD~V~~~~~~~ 399 (421)
T 1hyo_A 320 NFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQ 399 (421)
T ss_dssp ETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCSSGGGCCBHHHHTTTTTSCEECSTTCEESSCCTTCEEEEEEEEE
T ss_pred CHHhhcCCHHHHHHHHHHCCCccCCCCEEEcCCCCCCCCCCCcceEEEEecCcceeeccCCCCCccCCCCCEEEEEEEEC
Confidence 9999999999999998669999999999999999999999999999999999999999877 789999999999999998
Q ss_pred CCCceeeeeeeeeEEeeCC
Q 014670 401 GNGYTVGFGTCSGKIVPST 419 (420)
Q Consensus 401 ~~~~~~g~G~~~~~v~~~~ 419 (420)
++|.+||||+|+|+|+++.
T Consensus 400 ~~g~~igfG~~~~~V~~a~ 418 (421)
T 1hyo_A 400 GDGYRVGFGQCAGKVLPAL 418 (421)
T ss_dssp CSSCEEEEEEEEEEEECCC
T ss_pred CCCceeeeeeeEEEEecCC
Confidence 8999999999999999985
No 2
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.2e-68 Score=534.90 Aligned_cols=320 Identities=20% Similarity=0.243 Sum_probs=254.9
Q ss_pred CCeEEEeeCCCCCceeEEEECC--eEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccc
Q 014670 20 LPYGVFKPEPASVARPGVAIGE--YVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNE 97 (420)
Q Consensus 20 ~p~~~f~~~~~~~~r~Gv~~gd--~viDL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~r~~l~~~~~~~~ 97 (420)
|+|++|...+ ...+++++.+| .++++..+ .++|++||+. |++++..++.+.+.-.
T Consensus 22 MKlat~~~~~-~~g~l~vvs~Dl~~~~~~~~~------------------~~~l~~~l~~----w~~~~~~l~~l~~~l~ 78 (359)
T 3lzk_A 22 MKLATLKDST-RDGKLVVVSKDLTRCSEVGHI------------------ARTLQAALDD----WAHAGPRLERVAEGIE 78 (359)
T ss_dssp CEEEEECCSS-SSCEEEEECTTSSEEEECTTT------------------CSSHHHHHHT----HHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCC-cccEEEEEeCccccccccccc------------------CcCHHHHHhc----cHhhHHHHHHHHHHHh
Confidence 8999997532 34577777663 34443311 2699999997 5555555554432100
Q ss_pred hhhhhhhhhcccccccCCCcEecCCcccC-CcceEeecHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCc
Q 014670 98 ATLRDNANLRQKSLVPMGKVEMLLPMEIG-DYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTD 176 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~v~l~~P~~~~-~~~~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~ 176 (420)
......+++++++|++|++++ .|.++++|.+|++|+++.+ + +++|++|++.|++|+|+++|+++++++
T Consensus 79 --------~~~~~~~~~~~v~ll~Pv~~~~~~~~g~NY~~Ha~e~~~~~-g--~~~p~~~~~~P~~F~k~~ssv~g~~~~ 147 (359)
T 3lzk_A 79 --------TGAQPTMRFHEHDAASPLPRAFQWADGSAYVNHVELVRKAR-N--AEMPASFWTDPLIYQGGSDSFLGPRDP 147 (359)
T ss_dssp --------HTCSCCEECCGGGBCCSSSSCSCEEEECCCHHHHHHHHHHT-T--CCCCGGGGTSCCEEEECCSSCBCTTSC
T ss_pred --------cCCCCCCcCccceEcCCCCCCCEEEEEcCHHHHHHHHHHhc-C--CCCCCcccCccEEEECCCceEECCCCC
Confidence 012245689999999999855 5777777999999997653 2 346788999999999999999999999
Q ss_pred eeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC-CCCCcc
Q 014670 177 IVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFL 255 (420)
Q Consensus 177 I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~-~lg~~~ 255 (420)
|.+|.. +.++|||+||||||||. |++|++++|++||||||++||||+||+|.+++. +++|++
T Consensus 148 I~~P~~--------------s~~lD~E~ELavVIGk~---~~~v~~e~A~~~I~Gytl~ND~SaRD~Q~~~~~~g~~~~~ 210 (359)
T 3lzk_A 148 ILMADD--------------AWGIDMEGEAAVIVDDV---PMGATLDEAKAAIRLVMLVNDVSLRGLIPGELAKGFGFYQ 210 (359)
T ss_dssp EEESCT--------------TSCEECCEEEEEEECCB---CTTCCHHHHHHTEEEEEEEECCEETTTHHHHHHHTSCCST
T ss_pred EECCCC--------------CCCeeEEEEEEEEECCC---CCCCCHHHHHhhhcEEEEEEeccHHHhhhhhhccCCCccc
Confidence 999975 78999999999999999 999999999999999999999999999999875 489999
Q ss_pred ccccCCCCCCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecc-hhhhccCHHHHH
Q 014670 256 GKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSN-FKYLYWTLTQQL 334 (420)
Q Consensus 256 gKsfdt~iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~-t~~m~~~~~~lI 334 (420)
||+| +++||||||+|||++++.. ...++.|+++| ||+++|++| |++|+|+++|||
T Consensus 211 ~K~~-~~~gP~iVt~del~~~~~~---------------~~~~L~l~~~v--------NGe~~q~~~~t~~Mif~~~~lI 266 (359)
T 3lzk_A 211 SKPS-SAFSPVAVTPEELGEAWDG---------------GKLHLPLHVDL--------NGEPFGRANAGIDMTFDFPQLI 266 (359)
T ss_dssp TSCC-CEECSCEECHHHHGGGBCS---------------SCBCSBEEEEE--------TTEEEECCBTTSSCSSCHHHHH
T ss_pred cccc-cccCCccccHHHcCccccC---------------CccceEEEEEE--------CCEEEEcCcCcccccCCHHHHH
Confidence 9996 6799999999999875421 02357777777 999999999 999999999999
Q ss_pred HHHHhcCcccCCCCEEEcCCCCCCccCC-----------CCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCC
Q 014670 335 AHHTINGCNLRSGDLLGTGTISGPEPES-----------LGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNG 403 (420)
Q Consensus 335 a~~~S~~~tL~pGDvI~TGTp~Gvg~~~-----------~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~ 403 (420)
+|+ |+.+||+|||||+||||+|+..-. .||++|++ +.+++.....+++|||+||+|+++ +.+.+
T Consensus 267 a~l-S~~~tL~pGDvI~TGTpsGv~~~~~~~~~~~~~~G~~~l~E~~--~~~~~~~g~~~~~fL~~GD~V~i~--~~~~~ 341 (359)
T 3lzk_A 267 VHA-ARTRPLSAGTIIGSGTVSNKLEGGPGRPVSEGGAGYSCIAELR--MIETIEGGAPKTQFLKFGDVVRIE--MKDRT 341 (359)
T ss_dssp HHH-TTTSCBCTTEEEECCSCCCCBTTBCCCCGGGTSCBCSSHHHHH--HHHHHHHSSCCSCCBCTTCEEEEE--EBCTT
T ss_pred HHH-hCCCCcCCCCEEEcCCcCCCCcccccccccccccccccchhhh--hhhhhccCCCCCCcCCCCCEEEEE--EEcCC
Confidence 998 899999999999999999995432 57888873 333343333345799999999999 65544
Q ss_pred ceeeeeeeeeEEeeCC
Q 014670 404 YTVGFGTCSGKIVPST 419 (420)
Q Consensus 404 ~~~g~G~~~~~v~~~~ 419 (420)
++|+||+|+|+|+++.
T Consensus 342 g~~~~G~l~n~V~~~~ 357 (359)
T 3lzk_A 342 GHSIFGAIEQKVGKYE 357 (359)
T ss_dssp SCBSSCCEEEEEEECC
T ss_pred CcccccceEEEEEeCC
Confidence 5789999999999874
No 3
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=6.7e-59 Score=462.46 Aligned_cols=291 Identities=20% Similarity=0.282 Sum_probs=216.8
Q ss_pred CCCeEEEeeCCCCCceeEEE-ECCeEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccc
Q 014670 19 NLPYGVFKPEPASVARPGVA-IGEYVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNE 97 (420)
Q Consensus 19 n~p~~~f~~~~~~~~r~Gv~-~gd~viDL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~r~~l~~~~~~~~ 97 (420)
.|.|..++....++.|.|++ .++.++||+.+.... +. .| .....+++. |+.++..+++.+..+
T Consensus 21 ~m~~~l~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~--~~-------~~--~~~~~l~~~----ld~~~~~l~~~l~~~- 84 (329)
T 3r6o_A 21 SMNLRIVSFAGADQWQPGVLIDDDTVAPLAPMLARH--DI-------QV--SSARELIAL----LPQISPLISDELAGG- 84 (329)
T ss_dssp -CCCEEEEBC----CCEEEEEETTEEEECSCC--------------------CHHHHHTT----HHHHHHHHHHTC----
T ss_pred ceeEEEEEEccCCCccceEEecCCEEEEchhhhccc--cc-------cc--cchhhHHHH----HHHHHHHHHHHHhcC-
Confidence 34455555555566677776 588999998765421 00 01 223445553 444555554322211
Q ss_pred hhhhhhhhhcccccccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCC
Q 014670 98 ATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG 174 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g 174 (420)
....+++++++|++|++.+. .+||. |.+|++ +|.. .|. .+.|++|+|+++++++++
T Consensus 85 ----------~~~~~~~~~v~llaPv~~p~-kI~cvG~NY~~H~~-~g~~--------~P~-~~~P~~F~K~~~s~~g~~ 143 (329)
T 3r6o_A 85 ----------SFEPVPLDSVALGAPIPEPG-QVIALGFNYPTHSD-TDSP--------LPK-MADPVVFMKSPTSISGPR 143 (329)
T ss_dssp --------------CBGGGSCBCCSSSSCS-CEEEEESCSTTC---------------------CCEEEEECGGGEECTT
T ss_pred ----------CCCCccCccceEcCCCCCCC-eEEEEcccHHHHHH-hCCC--------CCC-ccCCEEEEcccceEECCC
Confidence 23457999999999999774 34554 788998 5431 222 248999999999999999
Q ss_pred CceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhh---hcC--
Q 014670 175 TDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAW---EYV-- 249 (420)
Q Consensus 175 ~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~---~~~-- 249 (420)
++|.+|.. +.++|||+||||||||. |++|++++|++||+|||++||||+||+|.. .+.
T Consensus 144 ~~I~~P~~--------------~~~~d~E~ELavVIGk~---~~~v~~e~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~ 206 (329)
T 3r6o_A 144 DAVIAPRT--------------SHALDYEIEIAVVIGKP---GYRIERSQAIKHVAGYMLANDITARDVALPFGFGGSPL 206 (329)
T ss_dssp CCEEECTT--------------CSCEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHCTTC------
T ss_pred CceECCCC--------------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhccccccc
Confidence 99999975 78999999999999999 999999999999999999999999999863 222
Q ss_pred CCCCccccccCCC--CCCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhc
Q 014670 250 PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLY 327 (420)
Q Consensus 250 ~lg~~~gKsfdt~--iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~ 327 (420)
..+|+++|+|||| +||||||+|++.+ +.++.|+++| ||+++|+++|++|+
T Consensus 207 ~~~w~~aK~fd~~~plGP~ivt~del~d--------------------~~~l~l~l~v--------NGe~~q~g~t~dMi 258 (329)
T 3r6o_A 207 QAQVVRGKGYPTFCPTGPWLFTTGSDTT--------------------FETFDFELRI--------NGELRQSGSTVDMT 258 (329)
T ss_dssp CCCHHHHHCSTTSEEBCSCEEECTTCSS--------------------CCCCEEEEEE--------TTEEEEEEEGGGCS
T ss_pred CCccccccCcCcCcccCCeEcChhhcCC--------------------hhhcEEEEEE--------CCEEEEecCHHHhc
Confidence 3468999999997 9999999999865 3568888888 99999999999999
Q ss_pred cCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceee
Q 014670 328 WTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVG 407 (420)
Q Consensus 328 ~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g 407 (420)
|++++||+|+ |+++||+|||||+||||+|+|.. +. +++||++||+|+++ |+ |
T Consensus 259 f~~~~lIa~l-S~~~tL~pGDvI~TGTp~GvG~~------------~~-------p~~~l~~GD~V~~e--i~------g 310 (329)
T 3r6o_A 259 LGFAEVVETV-SATIALRAGDIILTGTPGGCGFQ------------FD-------PPRYLRPGDVIEAH--SA------K 310 (329)
T ss_dssp SCHHHHHHHH-HTTSCBCTTCEEECCCCSCCGGG------------SS-------SCCCCCTTCEEEEE--ET------T
T ss_pred CCHHHHHHHH-HcCCCcCCCCEEEcCCccccCCC------------CC-------CCccCCCCCEEEEE--Ec------C
Confidence 9999999997 99999999999999999999741 22 56899999999999 77 9
Q ss_pred eeeeeeEEeeCC
Q 014670 408 FGTCSGKIVPST 419 (420)
Q Consensus 408 ~G~~~~~v~~~~ 419 (420)
||+++|+|+...
T Consensus 311 lG~l~n~V~~~~ 322 (329)
T 3r6o_A 311 LGKMRLPVHDEK 322 (329)
T ss_dssp TEEEEEEEEECC
T ss_pred ceEEEEEEEeCC
Confidence 999999998764
No 4
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=2e-56 Score=438.03 Aligned_cols=215 Identities=23% Similarity=0.281 Sum_probs=183.9
Q ss_pred ccccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCC
Q 014670 110 SLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 186 (420)
Q Consensus 110 ~~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~ 186 (420)
..+++++|+|++|+.+. ..+|. |.+|++|++.. . + . ++.|++|+|+++++++++++|.+|..
T Consensus 65 ~~~~~~~v~ll~Pv~p~--ki~cvG~NY~~H~~E~~~~---~--~-~---p~~P~~F~K~~~sv~g~~~~I~~P~~---- 129 (288)
T 4dbf_A 65 REWPLKDVRLLAPMLPS--KVVAIGRNYADHVAEVFKK---S--A-E---SLPPTLFLKPPTAVTGPESPIRIPSF---- 129 (288)
T ss_dssp EEEEGGGSEEECSCCCS--CEEEEESCBCC--------------------CCCCEEEEECGGGEECTTCCEEECTT----
T ss_pred ceeecccCeEcCCCCCc--eEEEEeccHHHHHHHhccC---C--C-C---CCCCEEEEeCcceeeCCCCceECCCC----
Confidence 46899999999999853 25555 77899999841 1 1 1 25799999999999999999999975
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcCCCCCccccccCCC--CC
Q 014670 187 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LS 264 (420)
Q Consensus 187 ~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKsfdt~--iG 264 (420)
++++|||+|||+||||+ |++|++++|++||+|||++||||+||+|.++. +|+++|+|||| ||
T Consensus 130 ----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~I~Gytv~nDvsaRd~Q~~~~---~w~~aK~fd~~~plG 193 (288)
T 4dbf_A 130 ----------ATKVEFEGELAVVIGKP---CKNVKADDWKSVVLGFTIINDVSSRDLQFADG---QWARAKGIDTFGPIG 193 (288)
T ss_dssp ----------CCSEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEEE
T ss_pred ----------CCceeEEEEEEEEECCC---cCCCCHHHHhhheeEEEEEEEeEhHHhhhccC---CccccccCCCCceeC
Confidence 78999999999999999 99999999999999999999999999998763 79999999997 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCC----eEEEecchhhhccCHHHHHHHHHhc
Q 014670 265 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDS----CVVTRSNFKYLYWTLTQQLAHHTIN 340 (420)
Q Consensus 265 Pwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NG----e~~q~~~t~~m~~~~~~lIa~~~S~ 340 (420)
|||+|..++.+ +.++.|+++| || +++|+++|++|+|++++||+|+ |+
T Consensus 194 P~ivt~~~~~d--------------------~~~l~i~~~v--------NG~~~~e~~Q~~~t~~mi~~~~~lIa~l-S~ 244 (288)
T 4dbf_A 194 PWIETDINSID--------------------LDNLPIKARL--------THDGETQLKQDSNSNQMIMKMGEIIEFI-TA 244 (288)
T ss_dssp EEEECCGGGSC--------------------TTSCEEEEEE--------EETTEEEEEEEEEGGGBSSCHHHHHHHH-HT
T ss_pred CccccccccCC--------------------ccccEEEEEE--------cCCcceEEEEecCHHHhcCCHHHHHHHH-hC
Confidence 99999754433 3568888888 99 9999999999999999999998 89
Q ss_pred CcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeC
Q 014670 341 GCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 418 (420)
Q Consensus 341 ~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~ 418 (420)
+|||+|||||+||||+|++ +|++||+|+++ |+ |+|+|+|+|+.|
T Consensus 245 ~~tL~pGDvI~TGTP~Gvg--------------------------~l~~GD~v~v~--ie------giG~L~n~v~~~ 288 (288)
T 4dbf_A 245 SMTLLPGDVIATGSPAGTE--------------------------AMVDGDYIEIE--IP------GIGKLGNPVVDA 288 (288)
T ss_dssp TSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEC
T ss_pred CCCcCCCCEEEcCCCCCCe--------------------------ecCCCCEEEEE--EC------CcEEEEEEEEeC
Confidence 9999999999999999975 58999999998 77 999999999875
No 5
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=8.1e-55 Score=422.51 Aligned_cols=212 Identities=30% Similarity=0.372 Sum_probs=188.4
Q ss_pred cccccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcC
Q 014670 109 KSLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFA 185 (420)
Q Consensus 109 ~~~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~ 185 (420)
+..+++++++|++|+.+. ..+|. |.+|++|+|.. .| +.|++|+|+++++++++++|.+|..
T Consensus 48 ~~~~~~~~v~ll~P~~p~--ki~cvG~NY~~h~~e~g~~--------~P---~~P~~F~K~~~s~~g~~~~I~~P~~--- 111 (265)
T 3rr6_A 48 GRQWPLADVRLLAPILAS--KVVAMGKNYAAHAAEMGGD--------PP---ESPVIFIKPNTSIIGPGLPIQLPPS--- 111 (265)
T ss_dssp EEEEEGGGSEECCSSCCS--CEEEESCCBCSSGGGTTSS--------CC---CCCCEEEECGGGEECTTSCEECCTT---
T ss_pred CcEeecccCeEcCCCCCc--eEEEEEcCHHHHHHHhCCC--------CC---CCCEEEEeCcceEeCCCCceECCCC---
Confidence 346899999999999853 25555 77899998742 12 5799999999999999999999975
Q ss_pred CCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcCCCCCccccccCCC--C
Q 014670 186 PSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--L 263 (420)
Q Consensus 186 ~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKsfdt~--i 263 (420)
+.++|||+|||+||||+ |++|++++|++||+|||++||||+||+|.++. +|+++|+|||| +
T Consensus 112 -----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~V~Gyt~~nDvsaRd~q~~~~---~w~~aK~fd~~~pl 174 (265)
T 3rr6_A 112 -----------ATEVHHEGELAIVIGRP---CKDVPAARAAENILGYTIGNDVSARDHQRADG---QWTRAKGHDTFCPL 174 (265)
T ss_dssp -----------CSCEEECEEEEEEECSC---BSSCCGGGTGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEE
T ss_pred -----------CCceeEEEEEEEEECCc---CCCCCHHHHHhheeEEEEEEEeEhHHhhhccC---CcceecccCCCccc
Confidence 78999999999999999 99999999999999999999999999998753 79999999997 9
Q ss_pred CCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcc
Q 014670 264 SPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCN 343 (420)
Q Consensus 264 GPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~t 343 (420)
||||+|. ++ +.++.|+++| ||+++|+++|++|+|+++++|+|+ |++||
T Consensus 175 GP~ivt~--~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lIa~l-S~~~t 222 (265)
T 3rr6_A 175 GPWIVTD--LD---------------------PADLEIRTEV--------NGQVRQRSRTSLLLHDVGAIVEWV-SAVMT 222 (265)
T ss_dssp EEEEESS--CC---------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSC
T ss_pred CCcCcCC--CC---------------------cccCEEEEEE--------CCEEEEEECHHhhcCCHHHHHHHH-hcCCC
Confidence 9999983 43 3568889988 999999999999999999999998 89999
Q ss_pred cCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeCC
Q 014670 344 LRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPST 419 (420)
Q Consensus 344 L~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~~ 419 (420)
|+|||||+||||+|++ +|++||+|+++ ++ |+|+|+|+|+.+.
T Consensus 223 L~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~v~--i~------giG~l~n~v~~~~ 264 (265)
T 3rr6_A 223 LLPGDVILTGTPEGVG--------------------------PIVDGDTVSVT--IE------GIGTLSNPVVRKA 264 (265)
T ss_dssp BCTTCEEECCCCSCCE--------------------------ECCTTCEEEEE--ET------TTEEEEEEEECC-
T ss_pred cCCCCEEEeCCCCCce--------------------------eCCCCCEEEEE--EC------CcEEEEEEEEeCC
Confidence 9999999999999974 68999999998 77 9999999998753
No 6
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-52 Score=405.85 Aligned_cols=214 Identities=23% Similarity=0.297 Sum_probs=177.8
Q ss_pred cccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCC---------Ccee
Q 014670 111 LVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG---------TDIV 178 (420)
Q Consensus 111 ~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g---------~~I~ 178 (420)
.+++++++|++|+.+.+ .+|. |.+|++|++..+. ++. | +.|++|+|+++++++++ ++|.
T Consensus 33 ~~~~~~~~ll~P~~p~~--i~~~g~Ny~~H~~e~~~~~~---~~~-p---~~P~~f~k~~~s~~~~~~~~rp~g~~~~i~ 103 (264)
T 2dfu_A 33 RYDLASVTLLPPATPTK--IVCVGRNYREHIREMGHDFG---EDL-P---KEPGLFLKGPNALARPGNPRDPWGTAEPVP 103 (264)
T ss_dssp EEEGGGSCEECSCCCSC--EEEECSCBC----------------C-C---SSCCEEEECGGGEECCCBTTBHHHHSCCEE
T ss_pred ccccccCeEcCCccCCe--EEEEeCcHHHHHHHhccccc---CCC-C---CCCEEEEeccceEEccCCcccccCCCccee
Confidence 47899999999996443 4544 7899999985422 112 2 46999999999999999 7777
Q ss_pred CCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcCCCCCccccc
Q 014670 179 RPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKS 258 (420)
Q Consensus 179 ~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKs 258 (420)
+|.. ++++|||+|||+||||+ +++|++++|++||+||+++||||+||+|.++ ++|+++|+
T Consensus 104 ~p~~--------------~~~~d~E~ELavvig~~---~~~v~~~~a~~~I~gy~~~nDvt~Rd~q~~~---~~~~~aK~ 163 (264)
T 2dfu_A 104 YPFF--------------TEELHYEGELAVVVGDR---MRHVPPEKALDHVLGYTVAVDITARDVQKKD---LQWVRAKS 163 (264)
T ss_dssp ECSS--------------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEHHHHHHS---SSSHHHHC
T ss_pred cCCC--------------CCceeEEEEEEEEECCC---CCCCCHHHHHHHhhEeEEEEEeEhhhhhhcc---CCCceeec
Confidence 6653 67899999999999999 9999999999999999999999999999875 48999999
Q ss_pred cCCC--CCCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHH
Q 014670 259 FGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAH 336 (420)
Q Consensus 259 fdt~--iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~ 336 (420)
|||+ +|||++| +++ +.++.|+++| ||+++|++++++|+|+++++|+|
T Consensus 164 ~d~~~plGp~i~~--~~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~ 212 (264)
T 2dfu_A 164 ADKFLPLGPWLET--DLN---------------------PQDTWVRTYV--------NGTLRQEGHTSQMIFSVAEILSY 212 (264)
T ss_dssp STTCEEEEEEEES--SCC---------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHH
T ss_pred CCCCEEECCcCcc--ccC---------------------CCccEEEEEE--------CCEEEEEecHHHhhcCHHHHHHH
Confidence 9995 9999998 453 3568888888 99999999999999999999999
Q ss_pred HHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEe
Q 014670 337 HTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 416 (420)
Q Consensus 337 ~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~ 416 (420)
+ |+++||+|||||+||||+|++ +|++||+|+++ ++ |+|+|+|+|+
T Consensus 213 l-s~~~tL~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~ 257 (264)
T 2dfu_A 213 I-STFMTLEPLDVVLTGTPEGVG--------------------------ALRPGDRLEVA--VE------GVGTLFTLIG 257 (264)
T ss_dssp H-HTTSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEE
T ss_pred H-hcCCCcCCCCEEEeCCCCCcc--------------------------ccCCCCEEEEE--Ee------CcEEEEEEEE
Confidence 8 899999999999999999974 68999999998 77 9999999998
Q ss_pred eCC
Q 014670 417 PST 419 (420)
Q Consensus 417 ~~~ 419 (420)
++.
T Consensus 258 ~~~ 260 (264)
T 2dfu_A 258 PKE 260 (264)
T ss_dssp EEC
T ss_pred ecC
Confidence 754
No 7
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=9.4e-52 Score=397.97 Aligned_cols=211 Identities=22% Similarity=0.313 Sum_probs=178.7
Q ss_pred ccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCC
Q 014670 112 VPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSG 188 (420)
Q Consensus 112 ~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~ 188 (420)
+++++++|++|+. +. .++|. |.+|++|+|.. .| ..|++|+|+++++++++++|.+|..
T Consensus 30 ~~~~~~~~l~P~~-p~-~i~~vG~ny~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~------ 90 (246)
T 1wzo_A 30 HRPEDVTWLLPFT-PG-KILGVALNYADHAEELGLS--------RP---EEPALFWKPNTSLLPHKGVVLYPKG------ 90 (246)
T ss_dssp ECGGGSEECCSSC-CC-CEEEEESCBC------CCC--------CC---SSCEEEEECGGGEECTTCCEEECTT------
T ss_pred cccccCEEcCCCC-CC-eEEEEEcChHHHHHHhCCC--------CC---CCCEEEEECcccEeCCCCeEECCCC------
Confidence 5778999999994 43 25555 67899998742 22 4699999999999999999999875
Q ss_pred CCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcCCCCCccccccCCC--CCCc
Q 014670 189 NSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPW 266 (420)
Q Consensus 189 ~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKsfdt~--iGPw 266 (420)
+.++|||+|||+||||+ |+++++++|++||+||+++||+|+||+|...+ .+|+++|+||++ +|||
T Consensus 91 --------~~~~~~E~ELavvig~~---~~~v~~~~a~~~i~g~~~~nD~s~rd~q~~~~--~~~~~~K~~d~~~~lGp~ 157 (246)
T 1wzo_A 91 --------ARFVHYEVELAVVVGRP---MKRVRAKDALDYVLGYTIANDLVARDYVTNTF--RPPIRAKGRDTFLPLGPF 157 (246)
T ss_dssp --------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEGGGC------CCCHHHHCSTTCEEEEEE
T ss_pred --------CCceeEEEEEEEEECCC---CCCCCHHHHHhheeEEEEEEECchHHhccccc--CCceeeccCCCCEEECCc
Confidence 67899999999999999 99999999999999999999999999998764 479999999996 9999
Q ss_pred cccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcccCC
Q 014670 267 IVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRS 346 (420)
Q Consensus 267 ivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~tL~p 346 (420)
++ .|++.+ +.++.|+++| ||+++|++++++|+|+++++|+|+ |+++||+|
T Consensus 158 i~-~~~i~d--------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~l-s~~~tL~p 207 (246)
T 1wzo_A 158 LV-VEEVED--------------------PQDLWLRAYV--------NGELRQEGHTSRMLYSVAELLEFI-SEFMTLEP 207 (246)
T ss_dssp EE-CSCCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCT
T ss_pred Cc-HHHcCC--------------------CcccEEEEEE--------CCEEEEeeCHHHhCCCHHHHHHHH-hCCCCcCC
Confidence 99 888754 3568888888 999999999999999999999998 89999999
Q ss_pred CCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeC
Q 014670 347 GDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 418 (420)
Q Consensus 347 GDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~ 418 (420)
||||+||||+|++ +|++||+|+++ ++ |+|+++|+|+.+
T Consensus 208 GDvI~TGTp~gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~~~ 245 (246)
T 1wzo_A 208 YDVLLTGTPKGIS--------------------------QVRPGDVMRLE--IE------GLGALENPIEEE 245 (246)
T ss_dssp TCEEECCCCCCSC--------------------------EECTTCEEEEE--ET------TSCEEEEEEEEC
T ss_pred CCEEEeCCCCCce--------------------------ECCCCCEEEEE--Ec------CcEEEEEEEEeC
Confidence 9999999999974 58999999998 77 899999999864
No 8
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=1.4e-51 Score=391.50 Aligned_cols=189 Identities=22% Similarity=0.213 Sum_probs=165.8
Q ss_pred CCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCCCCC
Q 014670 115 GKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSP 191 (420)
Q Consensus 115 ~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~ 191 (420)
+.|+|++|++.+--..+|. |.+|++|+|.. . ++.|++|+|++++++++|++|.+|..
T Consensus 3 ~~~~~~~P~p~~~~ki~cvG~Ny~~h~~e~g~~--------~---p~~P~~F~K~~~s~~~~g~~I~~P~~--------- 62 (224)
T 3l53_A 3 ELILNQRPYPRDLGKIVCVGRNYAAHAKELNNP--------I---PSSPILFIKPASSAVPFGPVFSIPKD--------- 62 (224)
T ss_dssp CCEETTEECSSCCCEEEEEECCSHHHHHHTTCC--------C---CSSCEEEEEEGGGEEESCSEECCCSS---------
T ss_pred ccceecCCCCCCCCeEEEEccCHHHHHHHhCCC--------C---CCCCEEEecCCceEECCCCeEecCCC---------
Confidence 5789999998653234444 88999999742 2 26799999999999999999999875
Q ss_pred CCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC-CCCCccccccCCC--CCCccc
Q 014670 192 PPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIV 268 (420)
Q Consensus 192 ~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~-~lg~~~gKsfdt~--iGPwiv 268 (420)
+.++|||+|||+||||+ |++|++++|++||+||+++||||+||+|.+.+. +++|+++|+|||+ +||| +
T Consensus 63 -----~~~~d~E~ELavvIgk~---~~~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~g~~w~~aK~fd~~~plGp~-v 133 (224)
T 3l53_A 63 -----QGSVHHELEIAILIGKA---LSRASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEF-V 133 (224)
T ss_dssp -----SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHTTCCSHHHHSSTTSEEECCB-B
T ss_pred -----CCCcceEEEEEEEECCC---CCCCCHHHHHhhccEEEEEEEeEhHHhhhhhhhcCCCcceeeccCCCcccCCc-E
Confidence 68999999999999999 999999999999999999999999999998764 5779999999996 9997 5
Q ss_pred ccc--ccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcccCC
Q 014670 269 TLD--ALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRS 346 (420)
Q Consensus 269 t~d--el~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~tL~p 346 (420)
+.| ++.+ +.++.++++| ||+++|++++++|+|+++++|+|+ |+++||+|
T Consensus 134 ~~~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~p 184 (224)
T 3l53_A 134 AVNLASEDE--------------------WQAIGLTLEK--------NGQFQQQGSSAEMLFPILPLIAHM-SEHFSLQP 184 (224)
T ss_dssp CCCCSSGGG--------------------GGGEEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-HHHSCBCT
T ss_pred eCchhhcCC--------------------hhccEEEEEE--------CCEEEEEEcHHHhcCCHHHHHHHH-HCCCCcCC
Confidence 777 7754 3568899988 999999999999999999999998 89999999
Q ss_pred CCEEEcCCCCCCccC
Q 014670 347 GDLLGTGTISGPEPE 361 (420)
Q Consensus 347 GDvI~TGTp~Gvg~~ 361 (420)
||||+||||+|++++
T Consensus 185 GDvI~TGTp~Gvg~l 199 (224)
T 3l53_A 185 GDVILTGTPAGVGPL 199 (224)
T ss_dssp TCEEECCCCSCCEEC
T ss_pred CCEEEcCCCCCCEEc
Confidence 999999999998643
No 9
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=3.7e-51 Score=388.00 Aligned_cols=209 Identities=18% Similarity=0.225 Sum_probs=180.4
Q ss_pred cccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCC
Q 014670 111 LVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 187 (420)
Q Consensus 111 ~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~ 187 (420)
.+++..-.+..|.. +.+|. |.+|++|+|.. .| +.|++|+|++++++++|++|.+|..
T Consensus 7 ~~~~~~~~~~~p~~----ki~~vG~Ny~~h~~e~g~~--------~p---~~P~~F~K~~~~~~~~g~~i~~p~~----- 66 (221)
T 3s52_A 7 HRDWQGALLDFPVN----KVVCVGSNYAEHIKEMGST--------AS---VEPVLFIKPETALCDIRQPVSIPKD----- 66 (221)
T ss_dssp CBBTTSCBCCSCCC----EEEEEESCBHHHHHHTTCC--------CC---SSCEEEEEEGGGEEETTSCBCCCSS-----
T ss_pred EEeeCCCcccCCCC----cEEEEeCCHHHHHHHhCCC--------CC---CceEEEEcCCceEeCCCCeEECCCC-----
Confidence 45666555544532 24444 78999999752 22 5799999999999999999999875
Q ss_pred CCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC-CCCCccccccCCC--CC
Q 014670 188 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LS 264 (420)
Q Consensus 188 ~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~-~lg~~~gKsfdt~--iG 264 (420)
+.++|||+|||+||||+ +++|+++||++||+||+++||||+||+|.+.+. +++|+++|+||++ +|
T Consensus 67 ---------~~~~d~E~ELavvig~~---~~~v~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~~~~~~~aK~~d~~~plG 134 (221)
T 3s52_A 67 ---------FGSVHHEIELAVLIGTP---LKQASEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKAFDGSCPIS 134 (221)
T ss_dssp ---------SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHHTCCSHHHHSSTTCEEEC
T ss_pred ---------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhhccCCCcceeecCCCCcccc
Confidence 67999999999999999 999999999999999999999999999987543 5789999999997 99
Q ss_pred CccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCccc
Q 014670 265 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNL 344 (420)
Q Consensus 265 Pwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~tL 344 (420)
||+ +.+++++ +.++.++++| ||+++|++++++|+|+++++|+|+ |+++||
T Consensus 135 p~i-~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL 184 (221)
T 3s52_A 135 GFI-PVAEFGD--------------------AQQADLSLTI--------NGEIRQQGNTRDMITPIIPLISYM-SRFFTL 184 (221)
T ss_dssp CBE-EHHHHCC--------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCB
T ss_pred Cce-ehhhcCC--------------------ccceEEEEEE--------CCEEEEEEcHHHccCCHHHHHHHH-hCCCCc
Confidence 998 5677754 3568888888 999999999999999999999998 899999
Q ss_pred CCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEe
Q 014670 345 RSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 416 (420)
Q Consensus 345 ~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~ 416 (420)
+|||||+||||+|++ .|++||+|+++ ++ |+| ++|+|+
T Consensus 185 ~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~------glG-l~~~v~ 221 (221)
T 3s52_A 185 RAGDIVLTGTPQGVG--------------------------PMQSGDMLKIM--LN------GKT-VNTRII 221 (221)
T ss_dssp CTTCEEECCCCSCCE--------------------------EECTTCEEEEE--ET------TEE-EEEEBC
T ss_pred CCCCEEEeCCCCcce--------------------------ecCCCCEEEEE--Ee------CeE-EEEEEC
Confidence 999999999999975 48999999988 77 899 999984
No 10
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=100.00 E-value=4.9e-50 Score=395.14 Aligned_cols=276 Identities=20% Similarity=0.199 Sum_probs=203.8
Q ss_pred CCeEEEeeCCCCCceeEEEECCeEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccchh
Q 014670 20 LPYGVFKPEPASVARPGVAIGEYVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNEAT 99 (420)
Q Consensus 20 ~p~~~f~~~~~~~~r~Gv~~gd~viDL~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~~~~~~r~~l~~~~~~~~~~ 99 (420)
|+|++|... ++..|+|++.++.++||+....... ...++|.++|+.+...+. ++..
T Consensus 1 Mkl~~~~~~-~g~~~~gvv~~~~v~~l~~~~~~~~-----------~~~~~l~~~l~~~~~~~~-~~~~----------- 56 (293)
T 2q18_X 1 MKLFRVVKR-GYYISYAILDNSTIIRLDEDPIKAL-----------MRYSENKEVLGDRVTGID-YQSL----------- 56 (293)
T ss_dssp CEEEEEEET-TEEEEEEECTTSCEEEESSCHHHHH-----------HHHHHHCCCCEEEESSCC-HHHH-----------
T ss_pred CEEEEEEeC-CCCEEEEEEECCEEEECcccccccc-----------ccCcCHHHHHhCChhhhh-Hhhc-----------
Confidence 678999763 3568999999999999975310000 001456666665432111 1110
Q ss_pred hhhhhhhcccccccCCCcEecCCcccCCcceEee---cHH----HHHHhccccCCCCCCCCCC--CCCCceeeecC-Cce
Q 014670 100 LRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFS---SMH----HAKNCGTIFRGPANAVPAN--WFHLPIAYHGR-ASS 169 (420)
Q Consensus 100 ~~~~~~~~~~~~~~l~~v~l~~P~~~~~~~~~~~---~~~----H~~e~g~~~~~~~~~~~p~--~~~~P~~f~k~-~ss 169 (420)
...+++++++|++|+++++ .+|+ |.+ |++|++..-.+ .+.++. .+..|++|+|+ +++
T Consensus 57 ---------~~~~~~~~v~ll~Pv~p~~--i~~vG~NY~~~~~~h~~e~~~~~~~--~~~~~~~~~~~~P~~F~k~~~~~ 123 (293)
T 2q18_X 57 ---------LKSFQINDIRITKPIDPPE--VWGSGISYEMARERYSEENVAKILG--KTIYEKVYDAVRPEIFFKATPNR 123 (293)
T ss_dssp ---------HHHSEETTEEECCSSCCSC--EEEEESCBC---------CCCEETT--EEHHHHHHHSSSCEEEEEECGGG
T ss_pred ---------CCCCCcccceEeCCcCcce--EEEEEechhhhhHHHHHHhcccccc--ccccccccCCCCCEEEECCCCCe
Confidence 1236889999999999543 4555 655 78887621001 000000 12569999996 799
Q ss_pred eeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC
Q 014670 170 VVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV 249 (420)
Q Consensus 170 vv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~ 249 (420)
++++|++|.+|.. +.++|||+|||+||||. ++ |+|||++||||+||+|.+.
T Consensus 124 ~~g~~~~i~~p~~--------------~~~~d~E~ELavvIg~~---~~----------i~Gyt~~nDvs~Rd~q~~~-- 174 (293)
T 2q18_X 124 CVGHGEAIAVRSD--------------SEWTLPEPELAVVLDSN---GK----------ILGYTIMDDVSARDLEAEN-- 174 (293)
T ss_dssp EECTTSCEEECTT--------------CSCEECCEEEEEEECTT---CC----------EEEEEEEEECEEHHHHHHC--
T ss_pred EecCCCEEEcCCC--------------CCCcceEEEEEEEECCC---Cc----------CceEEEEEEeEeehhhhhc--
Confidence 9999999999975 77899999999999998 64 9999999999999999863
Q ss_pred CCCCccccccCCC--CCCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEec--chhh
Q 014670 250 PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS--NFKY 325 (420)
Q Consensus 250 ~lg~~~gKsfdt~--iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~--~t~~ 325 (420)
+.+|.+||+|||+ +|||++|+|++.+ ++++.|+|+|++ ||+++|++ ||++
T Consensus 175 ~~~~~~aK~~d~~~plGP~ivt~dei~d--------------------~~~l~i~l~v~~------NGe~~q~g~~~t~~ 228 (293)
T 2q18_X 175 PLYLPQSKIYAGCCAFGPVIVTSDEIKN--------------------PYSLDITLKIVR------EGRVFFEGSVNTNK 228 (293)
T ss_dssp GGGHHHHHCSTTCEEEEEEEECGGGCSC--------------------TTSCEEEEEEEE------TTEEEEEEEEEGGG
T ss_pred ccCccccccCCCCEEECCcEeCHHHcCC--------------------cceeEEEEEEEE------CCEEEEECCCCHHH
Confidence 2346799999997 9999999998865 356888888755 99999997 6999
Q ss_pred hccCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCce
Q 014670 326 LYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYT 405 (420)
Q Consensus 326 m~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~ 405 (420)
|+|++++||+|+ |+++||+|||||+||| |+++. ...||++||+|+++ ++
T Consensus 229 mi~~~~~li~~l-s~~~tL~pGDvI~TGT--g~~p~---------------------~~~~l~~GD~v~~~--i~----- 277 (293)
T 2q18_X 229 MRRKIEEQIQYL-IRDNPIPDGTILTTGT--AIVPG---------------------RDKGLKDEDIVEIT--IS----- 277 (293)
T ss_dssp BCSCHHHHHHHH-HTTCCCCTTEEEECCC--SCCCC---------------------TTCCCCTTCEEEEE--ET-----
T ss_pred hccCHHHHHHHH-HcCCCCCCCCEEECCC--CCCCC---------------------CCcccCCCCEEEEE--Ec-----
Confidence 999999999998 8999999999999999 22210 24699999999999 77
Q ss_pred eeeeeeeeEEeeCC
Q 014670 406 VGFGTCSGKIVPST 419 (420)
Q Consensus 406 ~g~G~~~~~v~~~~ 419 (420)
|||+|+|+|+..+
T Consensus 278 -glG~l~n~v~~~~ 290 (293)
T 2q18_X 278 -NIGTLITPVKKRR 290 (293)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CcEEEEEEEEeee
Confidence 9999999998765
No 11
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=100.00 E-value=7.8e-48 Score=366.13 Aligned_cols=193 Identities=20% Similarity=0.272 Sum_probs=164.6
Q ss_pred cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCC
Q 014670 134 SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPG 213 (420)
Q Consensus 134 ~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~ 213 (420)
|.+|++|+|.. .| +.|++|+|++++++++|++|.+|.. +.++|||+|||+||||.
T Consensus 28 y~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~~~~~E~ELavvig~~ 82 (225)
T 1saw_A 28 YADHVREMRSA--------VL---SEPVLFLKPSTAYAPEGSPILMPAY--------------TRNLHHELELGVVMGKR 82 (225)
T ss_dssp BC----------------------CCCCEEEEEGGGEEETTSCEECCTT--------------CSCEEECEEEEEEESSC
T ss_pred cHHHHHHhCCC--------CC---CCCEEEECCcceeeCCCCeEECCCC--------------CCCccEEEEEEEEECCC
Confidence 67899998752 12 4599999999999999999999865 67899999999999998
Q ss_pred CCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC-CCCCccccccCCC--CCCccccccccCCccCCCCCCCCCCCcc
Q 014670 214 NELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPY 290 (420)
Q Consensus 214 ~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~-~lg~~~gKsfdt~--iGPwivt~del~~~~~~~~~~~~~~~~~ 290 (420)
|+++++++|++||+||+++||||+||+|.+.+. .++|+++|+||++ +|||+ +.+++.+
T Consensus 83 ---~~~v~~~~a~~~i~g~~~~nDvt~r~~q~~~~~~~~~~~~aK~~d~~~plGp~v-~~~~~~d--------------- 143 (225)
T 1saw_A 83 ---CRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFV-PKEKIPD--------------- 143 (225)
T ss_dssp ---BCSCCTTTGGGSEEEEEEEECCEEHHHHHHHHHHTCCSHHHHCSTTCEEECCCE-ETTSCSC---------------
T ss_pred ---CCCCCHHHHHHhheEEEecccccHHHHhhhhhccCCCceEeecCCCCEecCCcc-cHHHcCC---------------
Confidence 999999999999999999999999999998643 4789999999997 99996 6677643
Q ss_pred ccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEE
Q 014670 291 LAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELT 370 (420)
Q Consensus 291 l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~ 370 (420)
+.++.++++| ||+++|++++++|+|+++++|+|+ |+++||+|||||+||||+|++
T Consensus 144 -----~~~l~l~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL~~GDvI~TGTp~Gvg----------- 198 (225)
T 1saw_A 144 -----PHKLKLWLKV--------NGELRQEGETSSMIFSIPYIISYV-SKIITLEEGDIILTGTPKGVG----------- 198 (225)
T ss_dssp -----TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCE-----------
T ss_pred -----CceeEEEEEE--------CCEEEEEEcHHHcCCCHHHHHHHH-hCCCCcCCCCEEEcCCCCCce-----------
Confidence 3568888888 999999999999999999999998 899999999999999999974
Q ss_pred ecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeC
Q 014670 371 WNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 418 (420)
Q Consensus 371 ~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~ 418 (420)
.|++||+|+++ ++ |+|+++|+|+.+
T Consensus 199 ---------------~l~~Gd~v~~~--i~------glG~l~~~v~~~ 223 (225)
T 1saw_A 199 ---------------PVKENDEIEAG--IH------GLVSMTFKVEKP 223 (225)
T ss_dssp ---------------EECTTCEEEEE--ET------TTEEEEEEEECC
T ss_pred ---------------eCCCCCEEEEE--EC------CcEEEEEEEEEe
Confidence 48899999988 77 899999999754
No 12
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=5.4e-48 Score=398.82 Aligned_cols=212 Identities=22% Similarity=0.294 Sum_probs=183.5
Q ss_pred ccccCCCcEecCCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCC
Q 014670 110 SLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 186 (420)
Q Consensus 110 ~~~~l~~v~l~~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~ 186 (420)
..+++++++|++|+. . ..+|. |.+|++|+|.. .| +.|++|.|++++++++|++|.+|..
T Consensus 208 ~~~~~~~~~~~~p~~-~--~i~~vG~ny~~h~~e~g~~--------~p---~~P~~f~k~~~~~~~~g~~i~~p~~---- 269 (429)
T 1gtt_A 208 EVTTRKSFPTLPHPH-G--TLFALGLNYADHASELEFK--------PP---EEPLVFLKAPNTLTGDNQTSVRPNN---- 269 (429)
T ss_dssp GCCSCCCCCCCSSSC-S--CEEEESSCBCCC----------------C---CSCCEEEECGGGEECTTEEEEECTT----
T ss_pred cccccccceecCCCC-C--cEEEEEeCHHHHHHHhCCC--------CC---CCCEEEEcCcceEeCCCCeEEcCCC----
Confidence 567999999999998 3 24555 67899998742 12 5699999999999999999999875
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhhHhhceeEEEEeeccchhh-hhhhhcCCCCCccccccCCC--C
Q 014670 187 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARD-IQAWEYVPLGPFLGKSFGTT--L 263 (420)
Q Consensus 187 ~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~e~A~~~I~Gyti~ND~SaRd-~Q~~~~~~lg~~~gKsfdt~--i 263 (420)
+.++|||+|||+||||+ |+++++++|++||+||+++||+|+|| +|... .+|+++|+||++ +
T Consensus 270 ----------~~~~~~E~Elavvig~~---~~~v~~~~a~~~i~g~~~~nD~t~Rd~lq~~~---~~w~~~K~~d~~~~l 333 (429)
T 1gtt_A 270 ----------IEYMHYEAELVVVIGKQ---ARNVSEADAMDYVAGYTVCNDYAIRDYLENYY---RPNLRVKSRDGLTPM 333 (429)
T ss_dssp ----------CSCEECCEEEEEEECSC---BSSCCTTTGGGGEEEEEEEECCEEGGGCCSSS---SSCHHHHSCTTCEEB
T ss_pred ----------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEcccchhhhhhc---CCccccccCCCCEEE
Confidence 67899999999999999 99999999999999999999999999 58653 478999999997 9
Q ss_pred CCccccccccCCccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcc
Q 014670 264 SPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCN 343 (420)
Q Consensus 264 GPwivt~del~~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~t 343 (420)
|||++|.+++.+ +.++.|+++| ||+++|++++++|+|+++++|+|+ |+++|
T Consensus 334 Gp~iv~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~t 384 (429)
T 1gtt_A 334 LSTIVPKEAIPD--------------------PHNLTLRTFV--------NGELRQQGTTADLIFSVPFLIAYL-SEFMT 384 (429)
T ss_dssp CSCCEEGGGCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSC
T ss_pred CCcccCHHHcCC--------------------CccceEEEEE--------CCEEEEEeCHHHcCCCHHHHHHHH-hCCCC
Confidence 999999999864 3568889988 999999999999999999999998 89999
Q ss_pred cCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeC
Q 014670 344 LRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 418 (420)
Q Consensus 344 L~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~ 418 (420)
|+|||||+||||+|++ +|++||+|+++ ++ |||+|+|+|+.+
T Consensus 385 L~~GDvI~TGTp~gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~~~ 425 (429)
T 1gtt_A 385 LNPGDMIATGTPKGLS--------------------------DVVPGDEVVVE--VE------GVGRLVNRIVSE 425 (429)
T ss_dssp BCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEH
T ss_pred cCCCCEEEcCCCCCCe--------------------------ECCCCCEEEEE--Ec------CcEEEEEEEEec
Confidence 9999999999999974 79999999998 77 899999999863
No 13
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=100.00 E-value=1.1e-45 Score=357.80 Aligned_cols=205 Identities=22% Similarity=0.246 Sum_probs=166.8
Q ss_pred CCcccCCcceEee---cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeC------------------------
Q 014670 121 LPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVIS------------------------ 173 (420)
Q Consensus 121 ~P~~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~------------------------ 173 (420)
.|+..+. +++|. |.+|++|+|.. .| +.|++|+|++++++++
T Consensus 4 ~~~~~~~-ki~cvG~Ny~~H~~E~g~~--------~p---~~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (259)
T 1nkq_A 4 NYLKAAR-KIICIGRNYAAHIKELNNS--------TP---KQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGT 71 (259)
T ss_dssp GGGGGCC-CEEEECSCBCSSGGGGGC---------------CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSC
T ss_pred ccCCCCC-EEEEEecCHHHHHHHhCCC--------CC---CCCEEEeeChhhEecccccccccccccccccccccccccC
Confidence 3565554 25555 67899998742 12 5699999999999998
Q ss_pred C-CceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCh---hhHhhceeEEEEeeccchhhhhhhhcC
Q 014670 174 G-TDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDV---NEAADHIFGVMLMNDWSARDIQAWEYV 249 (420)
Q Consensus 174 g-~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~~~~g~~is~---e~A~~~I~Gyti~ND~SaRd~Q~~~~~ 249 (420)
+ ++|.+|.. + ++|||+|||+||||+ ++++++ ++|++||+||+++||||+||+|.+++.
T Consensus 72 ~~~~I~~p~~--------------~-~~d~E~ELavvIg~~---~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~~~~ 133 (259)
T 1nkq_A 72 NPGPIFIPRG--------------V-KVHHEIELALIVSKH---LSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKK 133 (259)
T ss_dssp CBCCEEECTT--------------C-CEEECEEEEEEECSC---BCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHHHHH
T ss_pred CCCcEEcCCC--------------C-cccEEEEEEEEECCC---CCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhhhhh
Confidence 4 78877753 4 699999999999999 999988 999999999999999999999986543
Q ss_pred -CCCCccccccCCC--CCCccccccccCCccCCCCCCCCCCCccccccCC-ceeeEEEEEEEeeCCCCCCeEEEecchhh
Q 014670 250 -PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKIS-KNYDISLEVQIKPAGKEDSCVVTRSNFKY 325 (420)
Q Consensus 250 -~lg~~~gKsfdt~--iGPwivt~del~~~~~~~~~~~~~~~~~l~~~~~-~~l~i~l~V~~~~~~~~NGe~~q~~~t~~ 325 (420)
+++|+++|+|||| +|||| +.+++.+.+. +. .++.|+++| ||+++|++++++
T Consensus 134 ~~~~~~~aK~~d~~~p~Gp~V-~~~~~~d~~~----------------dl~~~l~l~l~v--------NGe~~q~g~t~~ 188 (259)
T 1nkq_A 134 KGLPWTISKGFDTFMPISAIV-SREKFSSYKS----------------NLQDIFRVKCSV--------NGQLRQDGGTNL 188 (259)
T ss_dssp HTCCSHHHHHSTTCEEBCCCE-EGGGGGGGTT----------------CCTTTEEEEEEE--------TTEEEEEEEGGG
T ss_pred cCCCcceeeccCcCCCcceEE-ECccccCccc----------------ccccceEEEEEE--------CCEEEEEEcHHH
Confidence 5789999999995 99997 4577754210 11 457888888 999999999999
Q ss_pred hccCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCce
Q 014670 326 LYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYT 405 (420)
Q Consensus 326 m~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~ 405 (420)
|+|++++||+|+ |+++||+|||||+||||+|++ +|++||+|+++ ++
T Consensus 189 m~~~~~~Lia~l-S~~~tL~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~----- 234 (259)
T 1nkq_A 189 MLHPLHKILQHI-STMISLEPGDIILTGTPAGVG--------------------------ELKPGDRVHCE--LL----- 234 (259)
T ss_dssp BSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCE--------------------------EECTTCEEEEE--EE-----
T ss_pred cCCCHHHHHHHH-hCCCCcCCCCEEEeCCCCCcE--------------------------ecCCCCEEEEE--EE-----
Confidence 999999999997 899999999999999999975 56777777777 55
Q ss_pred eeeeeeeeEE
Q 014670 406 VGFGTCSGKI 415 (420)
Q Consensus 406 ~g~G~~~~~v 415 (420)
|+|++.|++
T Consensus 235 -glG~~~~~~ 243 (259)
T 1nkq_A 235 -QNNDNIVDM 243 (259)
T ss_dssp -ETTEEEEEE
T ss_pred -cCCceeEEE
Confidence 677666654
No 14
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=2.8e-44 Score=371.11 Aligned_cols=185 Identities=19% Similarity=0.135 Sum_probs=154.4
Q ss_pred cHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCC
Q 014670 134 SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPG 213 (420)
Q Consensus 134 ~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk~ 213 (420)
|.+|++|++..+.... ....++.|++|+|++++++++|++|.+|.. ++ +|||+|||+||||+
T Consensus 12 y~~H~~e~~~~~~~~~---~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~-~~~E~Elavvig~~ 73 (429)
T 1gtt_A 12 HRSQLDAWQEAFQQSP---YKAPPKTAVWFIKPRNTVIGCGEPIPFPQG--------------EK-VLSGATVALIVGKT 73 (429)
T ss_dssp BHHHHHHHTTGGGSTT---TCSCCSSCEEEEECGGGEECTTCCEEECTT--------------CC-EECCEEEEEEECSC
T ss_pred HHHHHHHhhccccccc---cCCCCCCCEEEEcCcceEEcCCCeeecCCC--------------CC-ccEEEEEEEEECCC
Confidence 7899999986432111 011246899999999999999999999864 56 99999999999999
Q ss_pred CCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcCCCCCccccccCCC--CCCccccccccCCccCCCCCCCCCCCccc
Q 014670 214 NELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYL 291 (420)
Q Consensus 214 ~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKsfdt~--iGPwivt~del~~~~~~~~~~~~~~~~~l 291 (420)
|++|++++|++||+||+++||||+||+|.. ++|.++|+|||+ +||| +++.+
T Consensus 74 ---~~~v~~~~a~~~i~gy~~~nD~s~Rd~~~~----~~~~~aK~fd~~~~lGp~----~~~~d---------------- 126 (429)
T 1gtt_A 74 ---ATKVREEDAAEYIAGYALANDVSLPEESFY----RPAIKAKCRDGFCPIGET----VALSN---------------- 126 (429)
T ss_dssp ---BSSCCGGGGGGGEEEEEEEECCBSCCCCSS----SCCHHHHCSTTCEEBCCC----BCCSC----------------
T ss_pred ---CCCCCHHHHHhHhhEEEEEEEeeehhhhcc----CCccccCCCCCCEEECCh----hhcCC----------------
Confidence 999999999999999999999999997743 368999999997 9999 55543
Q ss_pred cccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEe
Q 014670 292 AEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTW 371 (420)
Q Consensus 292 ~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~ 371 (420)
+.++.|+++| ||+++|++++++|+|+++++|+|+ |+++||+|||||+||||+|++++++||.+|+++
T Consensus 127 ----~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~li~~l-s~~~tL~~GDvI~TGTp~g~~~l~~GD~v~~~i 193 (429)
T 1gtt_A 127 ----VDNLTIYTEI--------NGRPADHWNTADLQRNAAQLLSAL-SEFATLNPGDAILLGTPQARVEIQPGDRVRVLA 193 (429)
T ss_dssp ----CTTCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCCEECTTCEEEEEE
T ss_pred ----ccccEEEEEE--------CCEEEEeCCHHHhcCCHHHHHHHH-hcCCCcCCCCEEEEeccCcceecCCCCEEEEEE
Confidence 3568889988 999999999999999999999998 899999999999999999986444444444444
Q ss_pred cCccc
Q 014670 372 NGQKP 376 (420)
Q Consensus 372 ~G~~~ 376 (420)
+|++.
T Consensus 194 ~glG~ 198 (429)
T 1gtt_A 194 EGFPP 198 (429)
T ss_dssp TTSCC
T ss_pred CCcce
Confidence 44443
No 15
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=100.00 E-value=1.2e-37 Score=303.16 Aligned_cols=190 Identities=14% Similarity=0.070 Sum_probs=155.6
Q ss_pred ecHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcC
Q 014670 133 SSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGP 212 (420)
Q Consensus 133 ~~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELavVIGk 212 (420)
.|..|++++|. +.|.++.+++++++++|++|.+|.. .++|||+|||+||||
T Consensus 65 ~~~~~~~~~g~--------------~~P~~~~l~~~~~~~~g~~i~~p~~---------------~~~~~E~ELa~vig~ 115 (267)
T 2eb4_A 65 TSKAMQASSQI--------------SEPDYGALLDDMFFHDGSDIPTDRF---------------IVPRIEVELAFVLAK 115 (267)
T ss_dssp HHHHHCSSCCC--------------CSCEEEEEEGGGEECTTEEECGGGC---------------SSCEEEEEEEEEESS
T ss_pred CCHHHHHHhCC--------------CCCcEEEEechheecCCCeecCCcc---------------CcccEeeEEEEEECC
Confidence 36778877763 2366666678899999999988753 368999999999999
Q ss_pred CCCCCCCCChhhHhhceeEEEEeeccchhhhhhhhcC-----CCCCcccc-ccCCC--CCCccccccccCCccCCCCCCC
Q 014670 213 GNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-----PLGPFLGK-SFGTT--LSPWIVTLDALEPFACDSPKQD 284 (420)
Q Consensus 213 ~~~~g~~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~~-----~lg~~~gK-sfdt~--iGPwivt~del~~~~~~~~~~~ 284 (420)
+++ |++++++||++||+||+++||++.|++|.|... .+.|..+| .|+++ +|||+++.++++
T Consensus 116 ~l~-~~~vt~~~a~~~v~g~~~~~ei~d~r~~~~~~~~~~~~~~~~~~Ad~~~~~~~~lGp~~v~~~~~d---------- 184 (267)
T 2eb4_A 116 PLR-GPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDELD---------- 184 (267)
T ss_dssp CBC-CSSCCHHHHHHHEEEEEEEEEEECCSBCCC------CCHHHHHHHTGGGEEEEEECSCCBCTTSSC----------
T ss_pred CCC-CCCCCHHHHHHhhceEEEEEEeecccccccccccccccCccceeecccccccEEECCCcCCcccCC----------
Confidence 854 689999999999999999999998888776531 12344555 45554 999999988864
Q ss_pred CCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhcC-----cccCCCCEEEcCCCCCCc
Q 014670 285 PQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTING-----CNLRSGDLLGTGTISGPE 359 (420)
Q Consensus 285 ~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~~-----~tL~pGDvI~TGTp~Gvg 359 (420)
+.++.++|+| ||+++|++++++|+|++.++|+|+ |+. +||+|||||+||||.|+
T Consensus 185 -----------~~~l~~~l~v--------NGe~~q~g~t~~ml~~p~~~i~~l-s~~l~~~g~tL~~GDvI~TGT~~g~- 243 (267)
T 2eb4_A 185 -----------LRWISALMYR--------NGVIEETGVAAGVLNHPANGVAWL-ANKLAPYDVQLEAGQIILGGSFTRP- 243 (267)
T ss_dssp -----------GGGCEEEEEE--------TTEEEEEEEGGGTTTSTTHHHHHH-HHHHGGGTCCBCTTCEEECCCSSCC-
T ss_pred -----------hhhCeEEEEE--------CCEEEEEecHHhcccCHHHHHHHH-HHHHHHcCCCCCCCCEEECCCCCCC-
Confidence 3568899998 999999999999999999999997 564 49999999999999875
Q ss_pred cCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEe
Q 014670 360 PESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 416 (420)
Q Consensus 360 ~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~ 416 (420)
.+|++||+|+++ ++ |+|+++|++.
T Consensus 244 -------------------------~~l~~GD~v~~~--i~------glG~l~~~~~ 267 (267)
T 2eb4_A 244 -------------------------VPARKGDTFHVD--YG------NMGSISCRFV 267 (267)
T ss_dssp -------------------------EECCTTCEEEEE--CG------GGCEEEEEEC
T ss_pred -------------------------EECCCCCEEEEE--Ec------CCCeEEEEEC
Confidence 488999999988 77 8999999873
No 16
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=100.00 E-value=1.6e-36 Score=295.65 Aligned_cols=186 Identities=15% Similarity=0.105 Sum_probs=157.1
Q ss_pred cceEeecHHHHHHhccccCCCCCCCCCCCCCCceeeecCCceeeeCCCceeCCCCCcCCCCCCCCCCCCCCCceeceEEE
Q 014670 128 YTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMA 207 (420)
Q Consensus 128 ~~~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~~~~~~s~~lD~E~ELa 207 (420)
|....+|.+|++++|.. .| ..|.+|.| +++++|++|.+|.. .++|||+|||
T Consensus 60 ~KiGln~~~h~~e~g~~--------~P---~~~~lf~~---~~~~~g~~i~~p~~---------------~~~~~E~ELa 110 (270)
T 2wqt_A 60 RKVGLTHPKVQQQLGVD--------QP---DFGTLFAD---MCYGDNEIIPFSRV---------------LQPRIEAEIA 110 (270)
T ss_dssp EEEECCSHHHHHTTTCS--------SC---EEEEEEGG---GEEETTEEECGGGS---------------SSCEEEEEEE
T ss_pred eEecCCCHHHHHHhCCC--------CC---CEEEEech---heeCCCCeeecCcc---------------CccceeeEEE
Confidence 33444588999999752 12 45888876 79999999988753 4789999999
Q ss_pred EEEcCCCCCCCCCChhhHhh---ceeEEEEeeccchhhhhhhhcCCCCCccccccCC----------CCCCccccccccC
Q 014670 208 AVVGPGNELGKPIDVNEAAD---HIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGT----------TLSPWIVTLDALE 274 (420)
Q Consensus 208 vVIGk~~~~g~~is~e~A~~---~I~Gyti~ND~SaRd~Q~~~~~~lg~~~gKsfdt----------~iGPwivt~del~ 274 (420)
+||||+++ |++++++||++ ||+||+.+||++.|||| +|+||| .+|||+++.++++
T Consensus 111 ~vig~~~~-g~~vt~~~a~~ai~~v~~~~ei~D~~~~~~~-----------~k~~d~~aDn~s~~~~~lGp~~v~~~~~d 178 (270)
T 2wqt_A 111 LVLNRDLP-ATDITFDELYNAIEWVLPALEVVGSRIRDWS-----------IQFVDTVADNASCGVYVIGGPAQRPAGLD 178 (270)
T ss_dssp EEESSCBC-CTTCCHHHHHTTEEEEEEEEEEECCSBGGGC-----------CCHHHHHHTGGGCCEEEECBCCBCSTTCC
T ss_pred EEECCCCC-CCCCCHHHHHHhhCeEEEEEEEEcCcccccC-----------CChhcEEccCccCCCEeECcCcCCcccCC
Confidence 99999955 68999999998 88999999999999987 345554 4999999998874
Q ss_pred CccCCCCCCCCCCCccccccCCceeeEEEEEEEeeCCCCCCeEEEecchhhhccCHHHHHHHHHhc-----CcccCCCCE
Q 014670 275 PFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFKYLYWTLTQQLAHHTIN-----GCNLRSGDL 349 (420)
Q Consensus 275 ~~~~~~~~~~~~~~~~l~~~~~~~l~i~l~V~~~~~~~~NGe~~q~~~t~~m~~~~~~lIa~~~S~-----~~tL~pGDv 349 (420)
+.++.++|+| ||+++|++++++|+|++.++|+|+ |+ ++||+||||
T Consensus 179 ---------------------~~~l~i~l~v--------NGe~~q~g~~~~ml~~p~~~v~~l-s~~l~~~g~tL~~Gdv 228 (270)
T 2wqt_A 179 ---------------------LKNCAMKMTR--------NNEEVSSGRGSECLGHPLNAAVWL-ARKMASLGEPLRTGDI 228 (270)
T ss_dssp ---------------------CSSCEEEEEE--------TTEEEEEEEGGGTTTSHHHHHHHH-HHHHHHTTCCBCTTCE
T ss_pred ---------------------hhhCeEEEEE--------CCEEEEEEchhhccCCHHHHHHHH-HHHHHhcCCCcCCCCE
Confidence 2568888888 999999999999999999999998 66 799999999
Q ss_pred EEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEEEEEEeCCCceeeeeeeeeEEeeC
Q 014670 350 LGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 418 (420)
Q Consensus 350 I~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~~~~~~~~~g~G~~~~~v~~~ 418 (420)
|+||||.|+ .+|++||+|+++ ++ |+|+++|+|+..
T Consensus 229 I~TGT~~g~--------------------------~~l~~GD~v~~~--i~------glG~l~~~v~~~ 263 (270)
T 2wqt_A 229 ILTGALGPM--------------------------VAVNAGDRFEAH--IE------GIGSVAATFSSA 263 (270)
T ss_dssp EEEEESSCC--------------------------EECCTTCEEEEE--ET------TTEEEEEEECC-
T ss_pred EEcCCCCCC--------------------------eeCCCCCEEEEE--Ec------CCceEEEEEEeC
Confidence 999999875 489999999988 77 899999999754
No 17
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=73.06 E-value=4 Score=31.22 Aligned_cols=64 Identities=17% Similarity=0.322 Sum_probs=38.7
Q ss_pred cccCCCCEEEcCCCCCCccCCCCceEEEE--ecCccccc-cCCCCCccCCCCCEEEEEEE-EeCCCceeee
Q 014670 342 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGFTRKFLEDGDEVTFTGF-CKGNGYTVGF 408 (420)
Q Consensus 342 ~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~~~-l~~~~~~~L~~GD~V~~~~~-~~~~~~~~g~ 408 (420)
|.++.||+ .+|+..++.+ .|..+++. ++|.-+++ +....-..++.||.|++... ++.+.++|.|
T Consensus 1 m~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gllh~sel~~~~~~~~~~Gd~V~v~V~~vd~~~~~i~l 68 (80)
T 2k52_A 1 MDVEPGKF-YKGVVTRIEK--YGAFINLNEQVRGLLRPRDMISLRLENLNVGDEIIVQAIDVRPEKREIDF 68 (80)
T ss_dssp CCCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEECGGGCSSCCGGGCCTTCEEEEEEEEEETTTTEEEE
T ss_pred CCCCCCCE-EEEEEEEEeC--CEEEEEECCCCEEEEEHHHCCcccceeeCCCCEEEEEEEEEECCCCEEEE
Confidence 56789998 6899888754 57777775 33332322 21111137999999998842 2333355544
No 18
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=59.73 E-value=9.5 Score=30.82 Aligned_cols=64 Identities=20% Similarity=0.213 Sum_probs=41.1
Q ss_pred cccCCCCEEEcCCCCCCccCCCCceEEEE--ecCccccc-cCCC----CCccCCCCCEEEEEEE-EeCCCceeee
Q 014670 342 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGF----TRKFLEDGDEVTFTGF-CKGNGYTVGF 408 (420)
Q Consensus 342 ~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~~~-l~~~----~~~~L~~GD~V~~~~~-~~~~~~~~g~ 408 (420)
..++.||+ .+|+..++.. .|..+++. ++|.-++. +.+. +...++.||+|++.+. ++.++++|.|
T Consensus 27 ~~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gll~~sel~~~~~~~~~~~~~vGd~V~v~V~~vd~~~~ki~L 98 (109)
T 2khj_A 27 ALNKKGAI-VTGKVTAVDA--KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 98 (109)
T ss_dssp TTCCSSSE-EEEEEEEECS--SCEEEECSTTCBCCBCTTCCCSSSSSSGGGSCCTTCEEEEEEEEEETTTTEEEE
T ss_pred hcCCCCCE-EEEEEEEEEC--CeEEEEECCCCEEEEEHHHcCcccccChhhccCCCCEEEEEEEEEECCCCEEEE
Confidence 47899998 5799888754 47777774 34443333 2221 3457999999998742 3445556654
No 19
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=54.73 E-value=7.9 Score=35.78 Aligned_cols=14 Identities=29% Similarity=0.264 Sum_probs=12.0
Q ss_pred ccCCCCCEEEEEEEEe
Q 014670 385 KFLEDGDEVTFTGFCK 400 (420)
Q Consensus 385 ~~L~~GD~V~~~~~~~ 400 (420)
..|++||+|+++ ++
T Consensus 197 g~l~~GD~v~~~--i~ 210 (224)
T 3l53_A 197 GPLEVGDSLSAK--LS 210 (224)
T ss_dssp EECCTTCEEEEE--EE
T ss_pred EEcCCCCEEEEE--EE
Confidence 369999999998 65
No 20
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=53.59 E-value=8.9 Score=34.38 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=38.6
Q ss_pred cCCCCEEEcCCCCCCccCCCCceEEEE----ecCccccc-cCCC----CCccCCCCCEEEEEE-EEeCCCceeeee
Q 014670 344 LRSGDLLGTGTISGPEPESLGCLLELT----WNGQKPLS-LDGF----TRKFLEDGDEVTFTG-FCKGNGYTVGFG 409 (420)
Q Consensus 344 L~pGDvI~TGTp~Gvg~~~~G~~le~~----~~G~~~~~-l~~~----~~~~L~~GD~V~~~~-~~~~~~~~~g~G 409 (420)
++.||++ +||..++.. -|..+++. ++|.-+++ +... +..+++.||+|++.+ .++.+.++|.|+
T Consensus 13 p~~G~iv-~G~V~~I~~--fGaFV~L~e~~g~eGLvhiSels~~~v~~~~~~~~vGd~V~VkVl~vD~~~~rI~LS 85 (182)
T 1kl9_A 13 PEVEDVV-MVNVRSIAE--MGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLS 85 (182)
T ss_dssp CCTTCEE-EEEEEEECS--SEEEEEETTTTTEEEEEEGGGC------------CTTCEEEEEEEEEETTTTEEEEE
T ss_pred CCCCCEE-EEEEEEEec--cEEEEEEccCCCcEEEEEHHHCCCcccCCHHHhcCCCCEEEEEEEEEECCCCEEEEE
Confidence 4789986 799988764 58888882 55554443 3222 467899999999874 234555667665
No 21
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=50.85 E-value=12 Score=31.40 Aligned_cols=64 Identities=20% Similarity=0.348 Sum_probs=40.3
Q ss_pred cccCCCCEEEcCCCCCCccCCCCceEEEE--ecCccccc-cCCC----CCccCCCCCEEEEEEE-EeCCCceeee
Q 014670 342 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGF----TRKFLEDGDEVTFTGF-CKGNGYTVGF 408 (420)
Q Consensus 342 ~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~~~-l~~~----~~~~L~~GD~V~~~~~-~~~~~~~~g~ 408 (420)
..++.||++ +|+..++.. -|..|++. +.|.-.+. +.+. ....++.||+|.+.+. ++.+.++|.|
T Consensus 3 ~~~~vG~iv-~G~V~~i~~--~G~FV~l~~~~~Glihisel~~~~~~~~~~~~~vGd~V~vkV~~vd~~~~kI~L 74 (130)
T 2k4k_A 3 AKFEVGSVY-TGKVTGLQA--YGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKISL 74 (130)
T ss_dssp CCCCTTCEE-EEEEEEEET--TEEEEEEETTEEEEEEGGGTSSSCCSCGGGTCCTTCEEEEEEEEEETTTTEEEE
T ss_pred CcCCCCCEE-EEEEEEEeC--CeEEEEECCCcEEEEEHHHCCcccccCccccCCCCCEEEEEEEEEeCCCCEEEE
Confidence 368899964 799888754 47777773 33433332 3222 3468999999998842 2344556654
No 22
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=46.02 E-value=23 Score=27.79 Aligned_cols=21 Identities=19% Similarity=-0.031 Sum_probs=14.1
Q ss_pred CCeEEEecchhhhccCHHHHHHHH
Q 014670 314 DSCVVTRSNFKYLYWTLTQQLAHH 337 (420)
Q Consensus 314 NGe~~q~~~t~~m~~~~~~lIa~~ 337 (420)
||+.++-... --++.++++.+
T Consensus 26 NGe~~el~~~---~~Tv~dLL~~L 46 (87)
T 1tyg_B 26 NGKDVKWKKD---TGTIQDLLASY 46 (87)
T ss_dssp TTEEECCSSS---CCBHHHHHHHT
T ss_pred CCEEEECCCC---CCcHHHHHHHh
Confidence 9998874221 12788899886
No 23
>2a19_A EIF-2- alpha, eukaryotic translation initiation factor 2 alpha; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Saccharomyces cerevisiae} PDB: 2a1a_A* 1q46_A
Probab=43.86 E-value=14 Score=32.75 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=39.5
Q ss_pred CCCCEEEcCCCCCCccCCCCceEEEE----ecCccccc-cCCC----CCccCCCCCEEEEEE-EEeCCCceeeee
Q 014670 345 RSGDLLGTGTISGPEPESLGCLLELT----WNGQKPLS-LDGF----TRKFLEDGDEVTFTG-FCKGNGYTVGFG 409 (420)
Q Consensus 345 ~pGDvI~TGTp~Gvg~~~~G~~le~~----~~G~~~~~-l~~~----~~~~L~~GD~V~~~~-~~~~~~~~~g~G 409 (420)
+.||++ +||..++.. -|..+++. ++|.-+++ +... +...++.||+|++.+ .++.+.++|.|.
T Consensus 14 ~~G~iv-~G~V~~i~~--fGaFV~L~e~~gveGLvhiSels~~~v~~~~~~~~vGd~V~vkVl~vd~~~~~I~LS 85 (175)
T 2a19_A 14 EIDDIV-MVNVQQIAE--MGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVAVVLRVDKEKGYIDLS 85 (175)
T ss_dssp CTTCEE-EEEEEEEET--TEEEEEETTTTTCEEEEECC--------CCCCCCCTTSEEEEEEEEEETTTTEEEEE
T ss_pred CCCCEE-EEEEEEEec--ceEEEEEcCCCCcEEEEEHHHcCCcccCCHHHcCCCCCEEEEEEEEEECCCCeEEEE
Confidence 379976 799888754 58888882 44443433 3221 467899999999874 234455666654
No 24
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=42.13 E-value=30 Score=26.78 Aligned_cols=31 Identities=13% Similarity=-0.068 Sum_probs=21.6
Q ss_pred CCceEEEEecCccccccCCCCCccCCCCCEEEEEEE
Q 014670 363 LGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGF 398 (420)
Q Consensus 363 ~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~ 398 (420)
.|..+.+.+.|+-.. ...|+.+||.|.++.+
T Consensus 35 nG~~~~c~i~GK~Rk-----~~I~Il~GD~V~ve~~ 65 (79)
T 3i4o_A 35 NGHKVLAHISGKMRQ-----HYIRILPEDRVVVELS 65 (79)
T ss_dssp TSCEEEEEECHHHHH-----TTCCCCTTCEEEEEEE
T ss_pred CCCEEEEEeCcceec-----CCccCCCCCEEEEEEC
Confidence 455667777664321 3579999999999955
No 25
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=40.82 E-value=20 Score=29.47 Aligned_cols=61 Identities=23% Similarity=0.159 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHhcCcccCCCCEEEcCCCCCCccCCCCceEEEEecCccccccCCCCCccCCCCCEEEE
Q 014670 328 WTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTF 395 (420)
Q Consensus 328 ~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~ 395 (420)
+++.++|.|+..++..+ ..+++..+ |...+.+| +-+-++|.. .++-.+-..-|++||+|.+
T Consensus 35 ~TV~dLl~~L~~~~~~~-r~~lf~~~---g~~~lrpg--IlVLVNg~d-~e~l~gldt~L~dgD~V~f 95 (110)
T 2k9x_A 35 TNLNGLVQLLKTNYVKE-RPDLLVDQ---TGQTLRPG--ILVLVNSCD-AEVVGGMDYVLNDGDTVEF 95 (110)
T ss_dssp CCHHHHHHHHTTTTCCS-CHHHHBCS---SSSSBCTT--EEEEESSSB-HHHHTSSCCCCCSSCEEEE
T ss_pred ccHHHHHHHHHHHcccc-chhhEecC---CCcccCCC--eEEEECCee-eeccCCcccCCCCcCEEEE
Confidence 78999999985444455 33554322 10124455 344556632 2221223467999999987
No 26
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=40.09 E-value=20 Score=26.10 Aligned_cols=20 Identities=10% Similarity=0.004 Sum_probs=14.2
Q ss_pred CCeEEEecchhhhccCHHHHHHHH
Q 014670 314 DSCVVTRSNFKYLYWTLTQQLAHH 337 (420)
Q Consensus 314 NGe~~q~~~t~~m~~~~~~lIa~~ 337 (420)
||+.++-... -++.++++++
T Consensus 6 Ng~~~~~~~~----~tv~~ll~~l 25 (66)
T 1f0z_A 6 NDQAMQCAAG----QTVHELLEQL 25 (66)
T ss_dssp SSCEECCCTT----CCHHHHHHHH
T ss_pred CCEEEEcCCC----CcHHHHHHHc
Confidence 8988763321 2788999986
No 27
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=38.17 E-value=33 Score=26.17 Aligned_cols=12 Identities=42% Similarity=0.720 Sum_probs=10.3
Q ss_pred ccCCCCCEEEEE
Q 014670 385 KFLEDGDEVTFT 396 (420)
Q Consensus 385 ~~L~~GD~V~~~ 396 (420)
+.|++||+|++=
T Consensus 52 ~~L~dGD~IEIv 63 (78)
T 2k5p_A 52 TTVKDGDAVEFL 63 (78)
T ss_dssp CEECSSBCEEEC
T ss_pred ccCCCCCEEEEE
Confidence 579999999983
No 28
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.21 E-value=58 Score=26.79 Aligned_cols=29 Identities=10% Similarity=0.177 Sum_probs=19.2
Q ss_pred CceEEEEecCccccccCCCCCccCCCCCEEEEEEE
Q 014670 364 GCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGF 398 (420)
Q Consensus 364 G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~~~ 398 (420)
|..+-+.+.|+-. ...|+++||.|.++-+
T Consensus 37 G~~~la~i~GK~R------k~IwI~~GD~VlVe~~ 65 (111)
T 2dgy_A 37 GQRFLVSMPSKYR------KNIWIKRGDFLIVDPI 65 (111)
T ss_dssp SCEEEEECCTTCC------SCCCCCSSCEEEEEEC
T ss_pred CCEEEEEechhhc------ccEEEcCCCEEEEEec
Confidence 4444455554321 4689999999999943
No 29
>2khi_A 30S ribosomal protein S1; acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=30.86 E-value=32 Score=27.91 Aligned_cols=66 Identities=21% Similarity=0.344 Sum_probs=40.7
Q ss_pred CcccCCCCEEEcCCCCCCccCCCCceEEEE--ecCccccc-cCC----C-CCccCCCCCEEEEEEE-EeCCCceeeee
Q 014670 341 GCNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDG----F-TRKFLEDGDEVTFTGF-CKGNGYTVGFG 409 (420)
Q Consensus 341 ~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~~~-l~~----~-~~~~L~~GD~V~~~~~-~~~~~~~~g~G 409 (420)
...++.|++ .+|+..++.. -|..+++. ++|.-+++ +.. . ....++.||+|++... ++.+.++|.|.
T Consensus 25 ~~~~~~G~~-~~G~V~~v~~--~G~FV~l~~~~~Glvhisel~~~~~~~~~~~~~~vGd~V~vkV~~vd~~~~rI~ls 99 (115)
T 2khi_A 25 AKRYPEGTK-LTGRVTNLTD--YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 99 (115)
T ss_dssp SCSSCSSCE-EEEEEEEEET--TEEEEECSTTCEEEEETTSSSCSSTTCSSTTTCCTTCEEEEEEEEEETTTTEEEEC
T ss_pred hhcCCCCCE-EEEEEEEEEC--CEEEEEECCCCEEEEEHHHCCccccccCcccEECCCCEEEEEEEEEECCCCEEEEE
Confidence 357899997 6899888764 46666663 23332222 211 1 3568999999999843 23445566553
No 30
>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1
Probab=27.54 E-value=38 Score=32.85 Aligned_cols=63 Identities=14% Similarity=0.147 Sum_probs=41.5
Q ss_pred cCCCCEEEcCCCCCCccCCCCceEEEE----ecCccccc-cCCC----CCccCCCCCEEEEEE-EEeCCCceeeee
Q 014670 344 LRSGDLLGTGTISGPEPESLGCLLELT----WNGQKPLS-LDGF----TRKFLEDGDEVTFTG-FCKGNGYTVGFG 409 (420)
Q Consensus 344 L~pGDvI~TGTp~Gvg~~~~G~~le~~----~~G~~~~~-l~~~----~~~~L~~GD~V~~~~-~~~~~~~~~g~G 409 (420)
++.||++ .|+..++.+ -|..+++. ++|.-+++ +... ...+++.||.|.+.+ .++.+.++|.|.
T Consensus 11 ~~vG~iv-~G~V~~I~~--fGaFV~L~ey~gveGLvhiSels~~~i~~~~~~~kvGd~V~VkVl~vD~~~~rI~LS 83 (308)
T 1q8k_A 11 PEVEDVV-MVNVRSIQE--MGAYVSLLEYNNIEGMIHLSELSRRRIRSINKLIRIGRNECVKVIRVDKEKGYIDLS 83 (308)
T ss_dssp CSSCCEE-EEEEEEEET--TEEEEESCTTTSCCEEECGGGTSCSSCSCCTTTCSSSCEEEEEEEEEETTTTEEEEE
T ss_pred CCCCCEE-EEEEEEEeC--cEEEEEECCCCCeEEEEEhHHcCcccccCHHHhcCCCCEEEEEEEEEeCCCCEEEEE
Confidence 4589975 689888765 47777773 44444433 3222 467899999999885 234555677665
No 31
>1s4k_A Putative cytoplasmic protein YDIL; structural genomics, MCSG, PSI, PROT structure initiative; 1.90A {Salmonella typhimurium} SCOP: a.35.1.6
Probab=23.25 E-value=31 Score=28.90 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=19.9
Q ss_pred CCChhhHhhceeEEEEeeccchhhhhhhhc
Q 014670 219 PIDVNEAADHIFGVMLMNDWSARDIQAWEY 248 (420)
Q Consensus 219 ~is~e~A~~~I~Gyti~ND~SaRd~Q~~~~ 248 (420)
..+.+||..+|. +|++.|.||.||.
T Consensus 16 gLt~~EaA~~i~-----~~vs~rtWQqWE~ 40 (120)
T 1s4k_A 16 DMTIEECTIYIT-----QDNNSATWQRWEA 40 (120)
T ss_dssp TCCHHHHHHHTS-----SSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh-----ccCCHHHHHHHHC
Confidence 367777777764 6899999999985
No 32
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=22.08 E-value=85 Score=26.35 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=19.1
Q ss_pred CccCCCCCEEEEEEEEeCCCceeeee
Q 014670 384 RKFLEDGDEVTFTGFCKGNGYTVGFG 409 (420)
Q Consensus 384 ~~~L~~GD~V~~~~~~~~~~~~~g~G 409 (420)
.+...|||++++++.+......++|-
T Consensus 75 ~~~V~PGD~l~l~v~~~~~~~~l~F~ 100 (129)
T 3esi_A 75 QQPILPGKTLRLVLIWHAGKQSLTFS 100 (129)
T ss_dssp CSCCCTTCEEEEEEEEETTTTEEEEE
T ss_pred CcccCCCCEEEEEEEEEecCCcEEEE
Confidence 46788999999997777655555554
No 33
>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A
Probab=20.75 E-value=62 Score=30.74 Aligned_cols=63 Identities=17% Similarity=0.277 Sum_probs=40.3
Q ss_pred cCCCCEEEcCCCCCCccCCCCceEEEE----ecCccccc-cCCC----CCccCCCCCEEEEEE-EEeCCCceeeee
Q 014670 344 LRSGDLLGTGTISGPEPESLGCLLELT----WNGQKPLS-LDGF----TRKFLEDGDEVTFTG-FCKGNGYTVGFG 409 (420)
Q Consensus 344 L~pGDvI~TGTp~Gvg~~~~G~~le~~----~~G~~~~~-l~~~----~~~~L~~GD~V~~~~-~~~~~~~~~g~G 409 (420)
++.||++ +||..++.. -|..+++. ++|.-+++ +... ....++.||.|.+.. .++.+.++|.|.
T Consensus 9 p~~Gdiv-~G~V~~I~~--fGaFV~L~e~~gieGlIhiSels~~~v~~~~~~~kvGd~V~vkVi~vD~~~~~I~LS 81 (275)
T 3aev_A 9 PEEGEFV-VATVKRIHN--YGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDPRKGHIDLS 81 (275)
T ss_dssp CCTTCEE-EEEEEEEET--TEEEEEETTSTTCEEEEEGGGSCSSCCSCGGGTCCTTCEEEEEEEEEETTTTEEEEE
T ss_pred CCCCCEE-EEEEEEEEC--cEEEEEECCCCCeEEEEEHHHcCcccccCHHhccCCCCEEEEEEEEEECCCCEEEEE
Confidence 4579975 799888754 58888884 34443333 3222 356899999999884 234445666553
No 34
>1ah9_A IF1, initiation factor 1; ribosome binding, protein-RNA interaction, OB fold; NMR {Escherichia coli} SCOP: b.40.4.5
Probab=20.18 E-value=88 Score=23.16 Aligned_cols=29 Identities=21% Similarity=0.219 Sum_probs=19.9
Q ss_pred CCceEEEEecCccccccCCCCCccCCCCCEEEEE
Q 014670 363 LGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFT 396 (420)
Q Consensus 363 ~G~~le~~~~G~~~~~l~~~~~~~L~~GD~V~~~ 396 (420)
.|..+++.+.|+-.. ...|..+||.|.++
T Consensus 27 ~g~~~~~~i~Gk~Rk-----~~i~i~vGD~V~ve 55 (71)
T 1ah9_A 27 NGHVVTAHISGKMRK-----NYIRILTGDKVTVE 55 (71)
T ss_dssp TSCEEEEEECSSGGG-----TTCCCCTTCEECCE
T ss_pred CCCEEEEEEcceEec-----cCccCCCCCEEEEE
Confidence 355667777664321 24688899999998
Done!