Query 014671
Match_columns 420
No_of_seqs 384 out of 3187
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 07:24:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014671.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014671hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02406 ethanolamine-phosphat 100.0 6.5E-93 1.4E-97 720.1 39.8 405 10-420 2-418 (418)
2 KOG2803 Choline phosphate cyti 100.0 2.2E-88 4.8E-93 648.7 25.2 346 62-416 5-357 (358)
3 PTZ00308 ethanolamine-phosphat 100.0 2.5E-78 5.5E-83 608.1 38.1 343 61-414 7-352 (353)
4 cd02173 ECT CTP:phosphoethanol 100.0 1.4E-37 3E-42 279.4 17.4 149 255-404 1-152 (152)
5 PLN02413 choline-phosphate cyt 100.0 5.2E-37 1.1E-41 295.0 18.1 153 252-405 23-178 (294)
6 cd02174 CCT CTP:phosphocholine 100.0 4.7E-36 1E-40 268.8 17.4 145 256-403 2-149 (150)
7 COG0615 TagD Cytidylyltransfer 100.0 3.4E-32 7.4E-37 237.9 11.7 130 257-391 2-139 (140)
8 KOG2804 Phosphorylcholine tran 100.0 2.7E-32 6E-37 261.1 11.6 145 256-403 63-210 (348)
9 cd02174 CCT CTP:phosphocholine 100.0 1.2E-30 2.6E-35 233.8 16.3 139 65-207 2-142 (150)
10 KOG2803 Choline phosphate cyti 100.0 1.4E-31 3E-36 257.7 10.1 136 257-395 9-145 (358)
11 PLN02413 choline-phosphate cyt 100.0 1.1E-29 2.4E-34 244.5 16.6 141 61-205 23-167 (294)
12 COG0615 TagD Cytidylyltransfer 100.0 1.2E-29 2.6E-34 221.9 13.7 131 66-202 2-139 (140)
13 PLN02406 ethanolamine-phosphat 100.0 1.4E-29 3.1E-34 257.7 16.3 135 254-391 51-190 (418)
14 cd02173 ECT CTP:phosphoethanol 100.0 5.7E-28 1.2E-32 217.1 16.9 135 65-203 2-140 (152)
15 KOG2804 Phosphorylcholine tran 100.0 1.8E-28 3.9E-33 234.9 11.2 140 62-205 60-201 (348)
16 PTZ00308 ethanolamine-phosphat 100.0 8.9E-28 1.9E-32 242.1 16.6 141 251-394 6-147 (353)
17 cd02170 cytidylyltransferase c 99.9 8.8E-27 1.9E-31 205.1 16.6 133 65-202 1-135 (136)
18 cd02172 RfaE_N N-terminal doma 99.9 9.1E-27 2E-31 207.6 16.8 135 65-204 4-143 (144)
19 COG2870 RfaE ADP-heptose synth 99.9 7.6E-26 1.6E-30 225.3 12.8 133 255-392 331-466 (467)
20 TIGR02199 rfaE_dom_II rfaE bif 99.9 3.1E-25 6.7E-30 197.7 15.2 130 65-201 11-143 (144)
21 cd02171 G3P_Cytidylyltransfera 99.9 1.5E-24 3.4E-29 189.1 15.7 128 65-202 1-128 (129)
22 TIGR01518 g3p_cytidyltrns glyc 99.9 1.3E-24 2.9E-29 188.9 14.0 123 68-200 1-125 (125)
23 cd02172 RfaE_N N-terminal doma 99.9 9.8E-24 2.1E-28 188.1 15.8 138 254-393 2-143 (144)
24 TIGR02199 rfaE_dom_II rfaE bif 99.9 8.9E-24 1.9E-28 188.3 15.3 131 255-391 10-144 (144)
25 cd02170 cytidylyltransferase c 99.9 6.1E-23 1.3E-27 180.7 15.5 132 256-391 1-135 (136)
26 PRK11316 bifunctional heptose 99.9 1.3E-22 2.9E-27 212.5 15.6 133 253-390 337-472 (473)
27 TIGR01518 g3p_cytidyltrns glyc 99.9 2.5E-22 5.5E-27 174.6 12.8 123 259-389 1-125 (125)
28 cd02171 G3P_Cytidylyltransfera 99.9 1.3E-21 2.8E-26 170.7 14.9 127 256-391 1-128 (129)
29 cd02064 FAD_synthetase_N FAD s 99.9 2.5E-21 5.4E-26 178.6 12.7 134 68-203 2-158 (180)
30 PRK11316 bifunctional heptose 99.9 5.7E-21 1.2E-25 200.2 15.7 133 64-202 339-473 (473)
31 PRK07143 hypothetical protein; 99.9 1.1E-20 2.3E-25 185.3 16.1 137 64-203 14-162 (279)
32 PRK05627 bifunctional riboflav 99.8 3.5E-20 7.7E-25 184.1 14.6 135 67-203 15-173 (305)
33 COG2870 RfaE ADP-heptose synth 99.8 1.5E-19 3.2E-24 180.5 12.4 132 65-202 332-465 (467)
34 PF06574 FAD_syn: FAD syntheta 99.8 1.3E-19 2.9E-24 163.7 9.0 131 63-195 3-157 (157)
35 TIGR00083 ribF riboflavin kina 99.8 6.3E-19 1.4E-23 173.7 13.8 134 68-203 1-156 (288)
36 COG0196 RibF FAD synthase [Coe 99.8 8.9E-18 1.9E-22 165.8 13.4 137 65-203 15-173 (304)
37 cd02039 cytidylyltransferase_l 99.7 9.7E-18 2.1E-22 146.7 11.5 131 67-199 1-143 (143)
38 PRK00777 phosphopantetheine ad 99.7 1.9E-17 4.2E-22 149.0 8.2 132 66-203 2-145 (153)
39 PRK00777 phosphopantetheine ad 99.7 2.2E-16 4.7E-21 142.2 11.0 129 257-394 2-147 (153)
40 PRK00168 coaD phosphopantethei 99.6 9.9E-16 2.1E-20 138.7 11.4 131 256-393 1-139 (159)
41 PRK00168 coaD phosphopantethei 99.6 1.3E-14 2.7E-19 131.5 12.0 127 66-203 2-138 (159)
42 PRK01170 phosphopantetheine ad 99.6 5.5E-15 1.2E-19 147.1 10.3 126 258-392 2-142 (322)
43 TIGR01527 arch_NMN_Atrans nico 99.6 4.3E-14 9.3E-19 128.8 13.6 125 67-203 1-136 (165)
44 COG0669 CoaD Phosphopantethein 99.6 1.4E-14 3E-19 128.5 9.4 89 256-348 2-91 (159)
45 smart00764 Citrate_ly_lig Citr 99.6 4.4E-14 9.6E-19 130.7 12.9 125 72-203 6-165 (182)
46 PF01467 CTP_transf_2: Cytidyl 99.5 4.4E-15 9.5E-20 130.9 5.3 126 260-388 1-157 (157)
47 cd02163 PPAT Phosphopantethein 99.5 6.9E-14 1.5E-18 125.9 11.2 125 68-203 2-136 (153)
48 cd02169 Citrate_lyase_ligase C 99.5 6.8E-14 1.5E-18 138.7 11.9 130 65-203 114-280 (297)
49 cd02163 PPAT Phosphopantethein 99.5 7.8E-14 1.7E-18 125.6 10.9 129 258-393 1-137 (153)
50 PLN02388 phosphopantetheine ad 99.5 1.4E-14 3.1E-19 132.8 6.1 138 61-205 15-169 (177)
51 cd02039 cytidylyltransferase_l 99.5 1.2E-13 2.5E-18 120.8 9.8 129 258-388 1-143 (143)
52 cd02166 NMNAT_Archaea Nicotina 99.5 4.2E-13 9.2E-18 122.1 13.3 126 67-202 1-137 (163)
53 PRK01170 phosphopantetheine ad 99.5 8.7E-14 1.9E-18 138.5 8.9 125 67-201 2-140 (322)
54 TIGR00125 cyt_tran_rel cytidyl 99.5 1.1E-13 2.5E-18 106.2 6.6 64 258-321 1-65 (66)
55 PF01467 CTP_transf_2: Cytidyl 99.5 9.3E-14 2E-18 122.5 6.9 130 69-199 1-157 (157)
56 TIGR01527 arch_NMN_Atrans nico 99.5 9.4E-13 2E-17 120.0 13.4 120 259-392 2-136 (165)
57 TIGR01510 coaD_prev_kdtB pante 99.5 6.1E-13 1.3E-17 120.0 11.8 119 67-203 1-136 (155)
58 PRK00071 nadD nicotinic acid m 99.5 1.3E-12 2.8E-17 122.7 14.3 136 64-203 3-180 (203)
59 COG1057 NadD Nicotinic acid mo 99.4 5.8E-13 1.3E-17 124.6 11.8 137 64-203 2-174 (197)
60 PRK13964 coaD phosphopantethei 99.4 4.7E-13 1E-17 118.6 10.4 89 257-349 2-92 (140)
61 TIGR00125 cyt_tran_rel cytidyl 99.4 2.1E-13 4.4E-18 104.8 6.8 64 67-130 1-64 (66)
62 cd02064 FAD_synthetase_N FAD s 99.4 7.4E-13 1.6E-17 122.2 11.4 132 259-393 2-159 (180)
63 TIGR01510 coaD_prev_kdtB pante 99.4 2.2E-12 4.7E-17 116.4 13.1 130 258-393 1-137 (155)
64 PRK06973 nicotinic acid mononu 99.4 2.2E-12 4.8E-17 124.5 13.4 118 65-186 22-155 (243)
65 cd02165 NMNAT Nicotinamide/nic 99.4 2.1E-12 4.6E-17 120.2 11.3 134 67-203 1-171 (192)
66 cd02164 PPAT_CoAS phosphopante 99.4 8E-13 1.7E-17 117.8 7.8 121 67-198 1-142 (143)
67 PRK08887 nicotinic acid mononu 99.4 5.5E-12 1.2E-16 116.0 11.4 133 66-203 3-149 (174)
68 TIGR00482 nicotinate (nicotina 99.4 7E-12 1.5E-16 116.9 12.3 132 69-203 1-172 (193)
69 PRK05627 bifunctional riboflav 99.3 2.3E-11 5.1E-16 121.1 15.2 134 258-394 15-175 (305)
70 cd02168 NMNAT_Nudix Nicotinami 99.3 4.7E-12 1E-16 117.2 7.8 129 68-203 2-145 (181)
71 cd02166 NMNAT_Archaea Nicotina 99.3 1.9E-11 4.2E-16 111.2 11.4 120 259-391 2-137 (163)
72 PRK13964 coaD phosphopantethei 99.3 2.5E-11 5.4E-16 107.7 11.6 88 66-162 2-91 (140)
73 PRK01153 nicotinamide-nucleoti 99.3 9E-11 1.9E-15 108.0 13.9 127 67-203 2-139 (174)
74 PRK05379 bifunctional nicotina 99.3 1.7E-11 3.8E-16 123.9 9.9 134 63-203 4-150 (340)
75 PRK07152 nadD putative nicotin 99.3 3.2E-11 7E-16 122.0 11.9 135 65-203 1-168 (342)
76 COG1019 Predicted nucleotidylt 99.2 5.3E-11 1.1E-15 105.2 9.6 127 63-199 3-145 (158)
77 cd02167 NMNAT_NadR Nicotinamid 99.2 1.3E-10 2.9E-15 105.2 11.3 126 68-201 2-147 (158)
78 cd02164 PPAT_CoAS phosphopante 99.2 1.2E-10 2.7E-15 103.8 8.7 121 259-387 2-142 (143)
79 COG0669 CoaD Phosphopantethein 99.1 4.1E-10 8.9E-15 100.3 9.1 88 65-161 2-90 (159)
80 cd02168 NMNAT_Nudix Nicotinami 99.1 3E-10 6.5E-15 105.1 8.6 125 259-391 2-144 (181)
81 PRK05379 bifunctional nicotina 99.1 1.1E-09 2.5E-14 110.7 12.9 130 254-393 4-151 (340)
82 PRK07143 hypothetical protein; 99.1 5E-09 1.1E-13 103.1 16.7 134 255-392 14-162 (279)
83 PRK08099 bifunctional DNA-bind 99.0 3.3E-09 7.1E-14 109.5 14.4 130 65-201 52-204 (399)
84 cd09286 NMNAT_Eukarya Nicotina 99.0 3.6E-09 7.9E-14 101.2 11.2 82 67-152 2-98 (225)
85 PLN02388 phosphopantetheine ad 99.0 5.7E-09 1.2E-13 96.0 12.0 135 251-393 14-168 (177)
86 cd02156 nt_trans nucleotidyl t 99.0 3.7E-10 8.1E-15 95.0 3.7 57 68-126 2-58 (105)
87 PLN02945 nicotinamide-nucleoti 99.0 5.4E-09 1.2E-13 100.7 12.1 99 65-163 22-140 (236)
88 PRK13670 hypothetical protein; 99.0 2.2E-09 4.8E-14 110.3 9.7 104 68-181 4-115 (388)
89 PRK01153 nicotinamide-nucleoti 98.9 8.5E-09 1.8E-13 94.9 11.9 124 258-393 2-140 (174)
90 cd02167 NMNAT_NadR Nicotinamid 98.9 1.5E-08 3.2E-13 91.9 11.7 129 258-395 1-152 (158)
91 PRK00071 nadD nicotinic acid m 98.8 6.1E-08 1.3E-12 91.1 13.9 93 256-349 4-111 (203)
92 PRK08887 nicotinic acid mononu 98.8 4.3E-08 9.3E-13 90.2 12.5 131 256-393 2-150 (174)
93 cd02156 nt_trans nucleotidyl t 98.8 2.1E-09 4.5E-14 90.5 3.4 57 259-316 2-58 (105)
94 PRK13793 nicotinamide-nucleoti 98.8 1.7E-08 3.7E-13 94.2 9.6 60 65-126 4-63 (196)
95 cd02165 NMNAT Nicotinamide/nic 98.8 4.9E-08 1.1E-12 90.9 12.5 91 258-350 1-106 (192)
96 COG1019 Predicted nucleotidylt 98.8 6.6E-09 1.4E-13 92.0 5.3 125 255-387 4-144 (158)
97 PRK13671 hypothetical protein; 98.8 2.9E-08 6.3E-13 98.3 9.5 88 71-163 6-103 (298)
98 TIGR00124 cit_ly_ligase [citra 98.8 1.4E-07 3E-12 95.2 14.3 129 65-202 139-308 (332)
99 cd00560 PanC Pantoate-beta-ala 98.7 1.5E-08 3.2E-13 99.6 6.2 113 65-181 24-163 (277)
100 PRK08099 bifunctional DNA-bind 98.6 1.7E-07 3.7E-12 96.9 11.5 134 252-395 48-209 (399)
101 TIGR01526 nadR_NMN_Atrans nico 98.6 1.4E-07 3E-12 95.1 10.0 68 256-324 1-70 (325)
102 PRK00380 panC pantoate--beta-a 98.6 3.1E-08 6.7E-13 97.7 4.6 110 67-181 26-162 (281)
103 TIGR00482 nicotinate (nicotina 98.6 5.2E-07 1.1E-11 84.2 12.5 88 261-349 2-104 (193)
104 cd02169 Citrate_lyase_ligase C 98.6 3.8E-07 8.3E-12 90.7 10.7 132 255-395 113-283 (297)
105 PRK13671 hypothetical protein; 98.5 2.4E-07 5.2E-12 91.8 8.3 85 263-349 7-103 (298)
106 TIGR01526 nadR_NMN_Atrans nico 98.5 1.8E-07 4E-12 94.2 7.5 58 66-125 2-59 (325)
107 PRK07152 nadD putative nicotin 98.5 8.7E-07 1.9E-11 89.8 12.1 133 256-392 1-168 (342)
108 COG1056 NadR Nicotinamide mono 98.5 7.3E-07 1.6E-11 81.5 10.2 60 64-125 2-61 (172)
109 smart00764 Citrate_ly_lig Citr 98.5 1.9E-06 4.1E-11 79.9 12.0 122 264-393 7-166 (182)
110 COG1057 NadD Nicotinic acid mo 98.4 1.8E-06 3.8E-11 81.1 11.0 95 255-351 2-113 (197)
111 PRK13793 nicotinamide-nucleoti 98.4 4.7E-07 1E-11 84.6 7.1 60 256-316 4-63 (196)
112 TIGR00124 cit_ly_ligase [citra 98.4 5.5E-07 1.2E-11 90.9 7.9 66 254-325 137-203 (332)
113 KOG3351 Predicted nucleotidylt 98.4 6E-07 1.3E-11 85.3 7.5 134 60-201 137-285 (293)
114 PRK06973 nicotinic acid mononu 98.3 1.3E-05 2.8E-10 77.6 13.5 58 255-315 21-80 (243)
115 TIGR00083 ribF riboflavin kina 98.2 6.9E-06 1.5E-10 81.5 9.6 132 259-393 1-157 (288)
116 cd09286 NMNAT_Eukarya Nicotina 98.2 1.4E-05 3.1E-10 76.5 11.0 68 258-325 2-75 (225)
117 COG1056 NadR Nicotinamide mono 98.2 3.1E-06 6.7E-11 77.4 5.9 62 255-317 2-64 (172)
118 KOG3351 Predicted nucleotidylt 98.1 4.8E-06 1E-10 79.3 5.1 66 250-315 136-204 (293)
119 PF06574 FAD_syn: FAD syntheta 98.0 1.8E-05 4E-10 71.6 8.6 97 255-352 4-119 (157)
120 PF08218 Citrate_ly_lig: Citra 98.0 5.4E-05 1.2E-09 69.3 11.3 122 73-203 7-165 (182)
121 COG0196 RibF FAD synthase [Coe 98.0 8.5E-05 1.9E-09 74.0 12.7 135 256-394 15-175 (304)
122 TIGR00018 panC pantoate--beta- 97.8 4E-05 8.6E-10 75.7 7.2 65 66-134 25-92 (282)
123 PLN02660 pantoate--beta-alanin 97.8 6.5E-05 1.4E-09 74.1 7.3 65 66-134 24-91 (284)
124 PRK13670 hypothetical protein; 97.7 6.4E-05 1.4E-09 77.6 6.8 87 261-348 6-103 (388)
125 COG3053 CitC Citrate lyase syn 97.6 0.0011 2.3E-08 65.2 13.2 138 59-203 139-316 (352)
126 PF05636 HIGH_NTase1: HIGH Nuc 97.5 0.00015 3.2E-09 74.9 6.2 88 70-162 6-103 (388)
127 COG1323 Predicted nucleotidylt 97.5 0.00027 6E-09 71.7 7.3 86 72-162 8-103 (358)
128 PLN02945 nicotinamide-nucleoti 97.4 0.00053 1.1E-08 66.1 7.7 71 254-324 20-95 (236)
129 COG1323 Predicted nucleotidylt 97.2 0.00075 1.6E-08 68.6 7.0 83 264-348 9-103 (358)
130 TIGR00339 sopT ATP sulphurylas 97.1 0.0041 8.9E-08 64.2 11.2 95 65-164 183-290 (383)
131 PF05636 HIGH_NTase1: HIGH Nuc 96.9 0.0014 3.1E-08 67.7 6.0 86 263-349 8-104 (388)
132 PF08218 Citrate_ly_lig: Citra 96.7 0.017 3.6E-07 53.2 10.8 55 265-325 8-63 (182)
133 TIGR00018 panC pantoate--beta- 95.9 0.015 3.3E-07 57.5 6.2 68 255-326 21-94 (282)
134 COG3053 CitC Citrate lyase syn 95.9 0.018 3.8E-07 56.9 6.2 68 252-325 141-209 (352)
135 PRK00380 panC pantoate--beta-a 95.8 0.031 6.7E-07 55.4 7.6 70 255-326 21-94 (281)
136 PLN02660 pantoate--beta-alanin 95.6 0.031 6.7E-07 55.4 6.9 68 255-326 20-93 (284)
137 PF02569 Pantoate_ligase: Pant 95.0 0.068 1.5E-06 52.9 7.0 66 68-134 24-92 (280)
138 PRK04149 sat sulfate adenylylt 94.8 0.66 1.4E-05 48.1 14.0 95 65-164 186-291 (391)
139 COG0414 PanC Panthothenate syn 94.8 0.11 2.3E-06 51.0 7.7 76 56-134 14-92 (285)
140 cd00560 PanC Pantoate-beta-ala 94.7 0.083 1.8E-06 52.3 6.8 89 255-347 21-120 (277)
141 cd00517 ATPS ATP-sulfurylase. 94.5 0.95 2.1E-05 46.4 14.1 95 65-164 156-263 (353)
142 COG2046 MET3 ATP sulfurylase ( 94.4 0.54 1.2E-05 48.0 11.8 96 64-164 182-288 (397)
143 PF01747 ATP-sulfurylase: ATP- 94.3 0.49 1.1E-05 45.1 10.9 94 66-164 21-126 (215)
144 KOG3199 Nicotinamide mononucle 94.0 1.1 2.4E-05 42.4 12.2 61 64-125 7-72 (234)
145 PRK13477 bifunctional pantoate 93.8 0.18 3.9E-06 54.1 7.6 67 67-134 21-90 (512)
146 PF02569 Pantoate_ligase: Pant 92.7 0.2 4.4E-06 49.6 5.4 69 255-325 21-93 (280)
147 COG0414 PanC Panthothenate syn 91.5 0.36 7.9E-06 47.4 5.6 72 253-325 19-93 (285)
148 PRK13477 bifunctional pantoate 90.9 0.34 7.4E-06 52.0 5.2 68 257-326 21-92 (512)
149 PRK05537 bifunctional sulfate 90.9 2.6 5.6E-05 46.0 12.0 97 64-164 185-291 (568)
150 KOG3042 Panthothenate syntheta 90.0 0.78 1.7E-05 43.5 6.1 62 72-134 30-94 (283)
151 PLN02341 pfkB-type carbohydrat 83.9 0.29 6.4E-06 51.9 -0.3 30 254-283 412-441 (470)
152 TIGR00339 sopT ATP sulphurylas 81.5 4 8.7E-05 42.3 6.9 89 257-349 184-289 (383)
153 KOG3042 Panthothenate syntheta 78.0 3.2 6.9E-05 39.5 4.3 40 255-295 23-62 (283)
154 KOG3199 Nicotinamide mononucle 66.9 19 0.00042 34.2 6.7 69 257-325 9-83 (234)
155 PLN02341 pfkB-type carbohydrat 44.1 13 0.00029 39.4 1.9 29 64-92 413-441 (470)
156 cd00517 ATPS ATP-sulfurylase. 29.0 2.9E+02 0.0062 28.5 8.6 89 257-350 157-263 (353)
157 COG2046 MET3 ATP sulfurylase ( 28.0 1.5E+02 0.0033 30.8 6.3 93 255-351 182-289 (397)
158 COG0159 TrpA Tryptophan syntha 26.8 4.9E+02 0.011 25.8 9.4 32 66-97 95-128 (265)
159 PRK00536 speE spermidine synth 25.3 82 0.0018 31.0 3.8 95 56-159 64-168 (262)
160 cd00951 KDGDH 5-dehydro-4-deox 24.9 5.6E+02 0.012 25.1 9.7 116 78-202 20-148 (289)
161 COG0352 ThiE Thiamine monophos 24.9 1.5E+02 0.0033 28.1 5.4 52 151-203 122-179 (211)
162 PRK02615 thiamine-phosphate py 24.7 2.1E+02 0.0045 29.4 6.7 27 75-101 219-247 (347)
163 COG2355 Zn-dependent dipeptida 23.1 1.7E+02 0.0036 29.7 5.5 91 75-168 166-267 (313)
164 COG0421 SpeE Spermidine syntha 22.3 4.9E+02 0.011 25.9 8.6 40 61-106 73-113 (282)
165 PRK05198 2-dehydro-3-deoxyphos 22.0 58 0.0013 32.1 2.0 57 73-129 187-260 (264)
166 cd01715 ETF_alpha The electron 20.8 5.6E+02 0.012 22.7 8.1 74 77-163 13-93 (168)
167 PRK12457 2-dehydro-3-deoxyphos 20.5 60 0.0013 32.3 1.8 62 73-134 195-273 (281)
168 PRK04149 sat sulfate adenylylt 20.1 2.7E+02 0.0058 29.1 6.5 91 256-350 186-291 (391)
No 1
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Probab=100.00 E-value=6.5e-93 Score=720.12 Aligned_cols=405 Identities=73% Similarity=1.129 Sum_probs=366.4
Q ss_pred ccccccccccccchhhhHHHHhhhhccccccCcccccCcccchH--HHhhcccCCCCceEEEEecccCcCCHHHHHHHHH
Q 014671 10 WIWDGLYYYPHFFGGLMLTAALLGVSTSYFGGIGVFSLPHLWSD--CFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQ 87 (420)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~q 87 (420)
+.+.+.++++|.+||+|+++|+||+++++++ ..+|++|++ .+ ++.++.+..|||++||||++|.||+++|+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~rV~~~G~FDllH~GH~~~L~q 75 (418)
T PLN02406 2 SISSAKYVASCLIGGLMLGASVLGLSLAGFG----SSLPYAWPDLGIF--KKKKKKKPVRVYMDGCFDMMHYGHANALRQ 75 (418)
T ss_pred CccccceeeehhhHHHHHHHHHHHHHhcccc----ccccccchhhhhh--ccccCCCceEEEEcCeeCCCCHHHHHHHHH
Confidence 3456788899999999999999999998886 236777887 33 444556678999999999999999999999
Q ss_pred HHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHHHHHHHhhcCccEEEEcCCCCCCC
Q 014671 88 AKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLP 167 (420)
Q Consensus 88 A~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~ 167 (420)
|+++||+|+|||++|+.+..+|++|+++++||++++++|+|||+|++++||.++.+|+.+++++++||++|||+||+..+
T Consensus 76 Ak~lGd~LIVGV~SDe~i~~~Kg~PV~~~eER~~~v~alk~VD~Vv~~apy~~~~d~~~~li~~~~~D~vVhGdD~~~~~ 155 (418)
T PLN02406 76 ARALGDELVVGVVSDEEIIANKGPPVTPMHERMIMVSGVKWVDEVIPDAPYAITEEFMNKLFNEYNIDYIIHGDDPCLLP 155 (418)
T ss_pred HHHhCCEEEEEEecChhhhccCCCCcCCHHHHHHHHHhcCCCceEEeCCccccchHHHHHHHHHhCCCEEEECCCccccC
Confidence 99999999999999999988899999999999999999999999999999999999999898999999999999999888
Q ss_pred CCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccccccccccccCCCCCCCchh-------hhcCcccccccccccc
Q 014671 168 DGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLR-------AIQSKDAHLSQFLPTS 240 (420)
Q Consensus 168 ~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 240 (420)
++.+.|...+..|+++.++|++++|||+|++||+.++++|+....+...++.++|+. .+.+..+.+++|++++
T Consensus 156 ~g~d~y~~~k~~Gr~~~i~rt~GvSTTdIv~Ril~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 235 (418)
T PLN02406 156 DGTDAYALAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDSHNHSSLQRQFSHGHSQFEDGGSGSGTRVSHFLPTS 235 (418)
T ss_pred CchHHHHHHHhCCEEEEEecCCCCCHHHHHHHHHHhhhccccccccchhhhhhhhccccccccccCCCCCCCcccccccH
Confidence 999999999999999999999999999999999999999875433322333333331 1223456778999999
Q ss_pred cchhccccCCCCCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CCC-CCCCHHHHHHhhhhcc
Q 014671 241 RRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SYH-PIMHLHERSLSVLACR 317 (420)
Q Consensus 241 ~~i~~~~~~~~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~~-pi~~~~ER~~~v~~~~ 317 (420)
++|.||++|+.|.+++++||++|+||+||.||+++|++|+++||+|||||++|+++++ |++ |+|+++||+++|++|+
T Consensus 236 ~~i~qf~~g~~p~~~~~iVyv~G~FDlfH~GHi~~L~~Ak~lGd~LIVGV~sD~~v~~~KG~~~Pi~~~~ER~~~v~ack 315 (418)
T PLN02406 236 RRIVQFSNGKGPGPDARIVYIDGAFDLFHAGHVEILRLARALGDFLLVGIHTDQTVSAHRGAHRPIMNLHERSLSVLACR 315 (418)
T ss_pred HHHHHHhccCCCCCCCeEEEECCeeccCCHHHHHHHHHHHHhCCEEEEEEeccHHHHHhcCCCCCCCCHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999987 544 9999999999999999
Q ss_pred ccceEEEcCCCCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHH
Q 014671 318 YVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYM 397 (420)
Q Consensus 318 ~VD~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~ 397 (420)
|||+||+++||..+.++|++++||++|||++|....+...+.|+|.+++.+|++..++++.++|||+||+||++||++|+
T Consensus 316 ~VD~VVi~ap~~~~~~~i~~~~~d~vvhG~~~~~~~~~~~~~D~Y~v~k~~G~~~~i~~~~~iSTt~II~RI~~~~~~y~ 395 (418)
T PLN02406 316 YVDEVIIGAPWEVSKDMITTFNISLVVHGTVAENNDFLKGEDDPYAVPKSMGIFQVLESPLDITTSTIIRRIVANHEAYQ 395 (418)
T ss_pred cccEEEeCCCCCCCHHHHHHhCCCEEEECCcCCCccccCCCCcchHHHhcCceEEEeCCCCCCcHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999988655555567899999999999999999999999999999999999999
Q ss_pred HHHhhhhHhHHHHHHhcccccCC
Q 014671 398 KRNAKKAVSEKKYYEQKMFVSGD 420 (420)
Q Consensus 398 ~r~~~k~~~e~~~~~~~~~~~~~ 420 (420)
+||++|+++|..+|++|.||+||
T Consensus 396 ~Rn~~K~~ke~~~~~~~~~~~~~ 418 (418)
T PLN02406 396 KRNEKKAESEKRYYESKSFVSGD 418 (418)
T ss_pred HHHHHHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999997
No 2
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-88 Score=648.74 Aligned_cols=346 Identities=52% Similarity=0.856 Sum_probs=317.3
Q ss_pred CCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCcccc
Q 014671 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAIT 141 (420)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~ 141 (420)
+.++.|||++||||++|+||.++|+||+++||.|+||||+|++|..+||+|+|+++||++|+++|||||+|++++||.++
T Consensus 5 ~~~~~rVw~DGCfDm~HyGHanaLrQAkalGdkLivGVHsDeeI~~nKGpPV~t~eERy~~v~~ikWVDEVV~~APyvtt 84 (358)
T KOG2803|consen 5 KNRPVRVWADGCFDMVHYGHANALRQAKALGDKLIVGVHSDEEITLNKGPPVFTDEERYEMVKAIKWVDEVVEGAPYVTT 84 (358)
T ss_pred CCCceeEEeccchhhhhhhhhHHHHHHHHhCCeEEEEecchHHHHhcCCCCcccHHHHHHHHhhcchhhhhhcCCCeecc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccccccccccccCCCCCCC
Q 014671 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRD 221 (420)
Q Consensus 142 ~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~~~~~~~~~~~~~~~~~ 221 (420)
.+++ ++|+||++|||+|.+..++|.|+|.+.|++|++++++||+|||||+|+.||+..+++++ +++...+..+..
T Consensus 85 ~~~m----d~y~cd~vvHGdDit~~a~G~D~Y~~vK~agrykevKRT~GVSTTelvgRmll~~~~~~-~~~~~~~~~e~~ 159 (358)
T KOG2803|consen 85 LEWM----DKYGCDYVVHGDDITLDADGLDCYRLVKAAGRYKEVKRTEGVSTTELVGRMLLKKRNHH-SDEVSSSQRELS 159 (358)
T ss_pred HHHH----HHhCCeEEEeCCcceecCCCccHHHHHHHhcchheeeeccCcchhhhhhHhhhhccCCC-ccccchhhhhhh
Confidence 9988 47999999999999999999999999999999999999999999999999999999888 332222222222
Q ss_pred ch----hhhcCcccccccccccccchhccccCCCCCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcccc
Q 014671 222 PL----RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVR 297 (420)
Q Consensus 222 ~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~ 297 (420)
++ +...++|+++++|+|++++|+||++|+.|.|+.++||++|.|||||.||+++|++|+++||+|||||++|+.++
T Consensus 160 ~~~g~~~~~~sp~t~~s~F~~tt~~i~~~~~G~~p~p~~kvVYvdGaFDLFH~GHl~~Le~ak~lgdyLIvGI~~D~~vn 239 (358)
T KOG2803|consen 160 FSSGTDDDGLSPWTRVSVFLPTTQKIIQFSNGREPKPTDKVVYVDGAFDLFHAGHLDFLEKAKRLGDYLIVGIHTDQTVN 239 (358)
T ss_pred hccccCCcccCCccceeeeeecCccceEeecCCCCCCCCcEEEEcCchhhhccchHHHHHHHHhccCceEEEeecCcchh
Confidence 32 33457899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C--CCC-CCCCHHHHHHhhhhccccceEEEcCCCCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEe
Q 014671 298 G--SYH-PIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLL 374 (420)
Q Consensus 298 ~--~~~-pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~ 374 (420)
+ |.+ ||||++||.++|++|||||+|++++||..+.++++.++++.+++|..... ....+||..++..|++.++
T Consensus 240 eykgs~~PiMnl~ER~LsvlackyVdeVvvGaP~~v~s~~i~~~~~~~v~~g~~~~~----~~~~~py~~~k~~~i~~~~ 315 (358)
T KOG2803|consen 240 EYKGSNYPIMNLHERVLSVLACKYVDEVVVGAPYEVTSEFIKLFNIDKVAHGTIPDF----RDPSDPYADPKRRGIFEEA 315 (358)
T ss_pred hhccCCCccchHHHHHHHHhhhcccceEEEcCchhccHHHHHhcCceEEEEeccccc----cCccCccccchhhcchhhc
Confidence 8 665 99999999999999999999999999999999999999999999983222 2345699999999999999
Q ss_pred CCCCCCCHHHHHHHHHhchHhHHHHHhhhhHhHHHHHHhccc
Q 014671 375 ESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYEQKMF 416 (420)
Q Consensus 375 ~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k~~~e~~~~~~~~~ 416 (420)
.+..++||+.|++||+.||++|++||+||+.+|+.+++++..
T Consensus 316 ~~~~dltte~Iv~RIis~r~~Ye~Rn~kk~~k~~~~~~~~~~ 357 (358)
T KOG2803|consen 316 DSGSDLTTELIVERIISNRQAYEARNQKKEGKEAPLNEAQHR 357 (358)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHhHHhhhcccchhhhhcc
Confidence 999999999999999999999999999999999999998643
No 3
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Probab=100.00 E-value=2.5e-78 Score=608.09 Aligned_cols=343 Identities=48% Similarity=0.813 Sum_probs=310.2
Q ss_pred CCCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccc
Q 014671 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (420)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~ 140 (420)
++.++++||++||||++|.||+++|+||+++|+.|+||+++|+.+.+.|++|+++++||++++++|+|||+|+++.||..
T Consensus 7 ~~~~~~~v~~~G~FD~vH~GH~~~L~qAk~~g~~Livgv~~d~~i~~~K~~pi~~~eeR~~~l~~~~~VD~Vv~~~p~~~ 86 (353)
T PTZ00308 7 KKPGTIRVWVDGCFDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGPPVMHQEERYEALRACKWVDEVVEGYPYTT 86 (353)
T ss_pred CCCCcEEEEEEeecccCCHHHHHHHHHHHHhCCEEEEEeCCHHHHhhcCCCCCCCHHHHHHHHHhcCCccEEEECCCCCc
Confidence 34456899999999999999999999999999999999999999988888899999999999999999999999889977
Q ss_pred cHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccccccccccccCCCCCC
Q 014671 141 TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPR 220 (420)
Q Consensus 141 ~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~~~~~~~~~~~~~~~~ 220 (420)
+.+|+ ++++||+||||+||++|.+|.++|+.+++.|+++.++|++++|||+|++||+.++++++.... ....+
T Consensus 87 ~~~fI----~~l~~d~vv~GdD~~~g~~g~~~~~~lk~~G~~~~v~rt~g~STt~ii~ril~~~~~~~~~~~-~~~~~-- 159 (353)
T PTZ00308 87 RLEDL----ERLECDFVVHGDDISVDLNGRNSYQEIIDAGKFKVVKRTEGISTTDLVGRMLLCTKSHLLKSV-DEVQL-- 159 (353)
T ss_pred hHHHH----HHhCCCEEEECCCCCCCCCccchHHHHHhCCeEEEEecCCCCCHHHHHHHHHHhhhccccccc-ccccc--
Confidence 77776 578999999999999999999999999999999999999999999999999999998764221 11111
Q ss_pred CchhhhcCcccccccccccccchhccccCCCCCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--
Q 014671 221 DPLRAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-- 298 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-- 298 (420)
+ ...+.++..++|++++++|.+|+.+..|.+++++||++|+||+||.||+++|++|+++||+|||||++|++++.
T Consensus 160 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiv~~~G~FDl~H~GHi~~L~~A~~lgd~LIVgV~sD~~v~~~K 236 (353)
T PTZ00308 160 --E-SSLFPYTPTSHCLTTSRKIVQFSNNRSPKPGDRIVYVDGSFDLFHIGHIRVLQKARELGDYLIVGVHEDQVVNEQK 236 (353)
T ss_pred --c-cccccCCCcceeecchhheeeccccCCCCCCCeEEEECCccCCCCHHHHHHHHHHHHhCCEEEEEEcchHHhHhhc
Confidence 1 12234556788999999999999998888889999999999999999999999999999999999999999987
Q ss_pred CCC-CCCCHHHHHHhhhhccccceEEEcCCCCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCC
Q 014671 299 SYH-PIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESP 377 (420)
Q Consensus 299 ~~~-pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~ 377 (420)
|++ |+|+++||++++++|++||+|++++|+..+.+++++++||++|||.||.... .+++.|+|++++.+|++..++++
T Consensus 237 g~~~Pi~~~~eR~~~v~a~~~Vd~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~-~~~~~d~y~~~k~~G~~~~i~~~ 315 (353)
T PTZ00308 237 GSNYPIMNLNERVLGVLSCRYVDEVVIGAPFDVTKEVIDSLHINVVVGGKFSDLVN-EEGGSDPYEVPKAMGIFKEVDSG 315 (353)
T ss_pred CCCCCCCCHHHHHHHHHhhCCCCeEEEcCCCCChHHHHHHhCCCEEEECCCCcccc-CCCcccchHHHhcCceEEEeCCC
Confidence 434 9999999999999999999999999999999999999999999999986432 24467899999999999999999
Q ss_pred CCCCHHHHHHHHHhchHhHHHHHhhhhHhHHHHHHhc
Q 014671 378 KSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYEQK 414 (420)
Q Consensus 378 ~~~Stt~Ii~RI~~~~~~~~~r~~~k~~~e~~~~~~~ 414 (420)
+++|||+||+||++||++|++||++|.++|..+|+.+
T Consensus 316 ~~~sTt~ii~RI~~~r~~~~~r~~~k~~~e~~~~~~~ 352 (353)
T PTZ00308 316 CDLTTDSIVDRVVKNRLAFLKRQAKKRAKEIKSQEIK 352 (353)
T ss_pred CCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999875
No 4
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT). CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
Probab=100.00 E-value=1.4e-37 Score=279.36 Aligned_cols=149 Identities=56% Similarity=0.932 Sum_probs=136.8
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CCC-CCCCHHHHHHhhhhccccceEEEcCCCCch
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SYH-PIMHLHERSLSVLACRYVDEVIIGAPWEVT 331 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~~-pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~ 331 (420)
++++||++|+||+||.||+++|++|+++||+|||||++|++++. +++ |+|+++||+++|++|++||+|++++|+.++
T Consensus 1 ~~~iv~~~G~FD~~H~GHi~~L~~A~~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~~~~Vd~V~v~~~~~~~ 80 (152)
T cd02173 1 GDKVVYVDGAFDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDEVVIGAPYVIT 80 (152)
T ss_pred CCeEEEEcCcccCCCHHHHHHHHHHHHcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHhcCCCCEEEECCCCcch
Confidence 36899999999999999999999999999999999999999976 444 999999999999999999999999999888
Q ss_pred HHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhh
Q 014671 332 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKA 404 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k~ 404 (420)
.+++++++||++++|.+|..++. ..+.++|.+++.+|++.++++++++|||+|++||+++|+.|++||++|.
T Consensus 81 ~~~~~~~~~d~vv~G~d~~~~~~-~~~~~~~~~~~~~G~~~~v~~~~~~Sts~Ii~rI~~~~~~y~~r~~~k~ 152 (152)
T cd02173 81 KELIEHFKIDVVVHGKTEETPDS-LDGEDPYAVPKEMGIFKEIDSGSDLTTRDIVNRIIKNRLAYEARNKKKE 152 (152)
T ss_pred HHHHHHhCCCEEEECCCCccccc-cCchHHHHHHHhCCeEEEecCCCCCCHHHHHHHHHHhHHHHHHHHhccC
Confidence 99999999999999999865421 2346789999999999999999999999999999999999999999984
No 5
>PLN02413 choline-phosphate cytidylyltransferase
Probab=100.00 E-value=5.2e-37 Score=294.96 Aligned_cols=153 Identities=32% Similarity=0.573 Sum_probs=138.2
Q ss_pred CCCCCeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCC
Q 014671 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPW 328 (420)
Q Consensus 252 ~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~ 328 (420)
+.....+||++|+||+||+||+++|++||++| |+|||||++|+++++ +++|+|+++||+++|++|+|||+||+++||
T Consensus 23 ~~~r~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KGrPIm~~~ER~e~V~acKyVDeVV~~aP~ 102 (294)
T PLN02413 23 PSDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPW 102 (294)
T ss_pred CCCCceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCCCCCCCHHHHHHHHHhcccccEEeeCCCc
Confidence 44556899999999999999999999999996 799999999999988 556999999999999999999999999999
Q ss_pred CchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhhH
Q 014671 329 EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAV 405 (420)
Q Consensus 329 ~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k~~ 405 (420)
.++.++|++++||+++||++...+ ....+.|+|..++.+|++.+++++.++|||+||+||+++|+.|++||.+|..
T Consensus 103 ~~t~efI~~~kpDiVvhGd~~~~d-~~~~g~D~Y~~vK~~G~f~~i~Rt~gvSTTdII~RIlk~y~~Y~~Rn~~rg~ 178 (294)
T PLN02413 103 VITQEFLDKHRIDYVAHDALPYAD-ASGAGKDVYEFVKKIGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLARGY 178 (294)
T ss_pred cccHHHHHHhCCCEEEECCCCCcc-ccccCchhHHHHHHCCeEEEecCCCCcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999753322 1124578999999999999999999999999999999999999999999843
No 6
>cd02174 CCT CTP:phosphocholine cytidylyltransferase. CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
Probab=100.00 E-value=4.7e-36 Score=268.80 Aligned_cols=145 Identities=34% Similarity=0.634 Sum_probs=134.4
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 332 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~ 332 (420)
.++||++|+||+||.||+++|++|+++| |+|||||++|+++++ ++.|+|+++||+++|++|+|||+|++++|+..+.
T Consensus 2 ~~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~Vi~~~~~~~~~ 81 (150)
T cd02174 2 PVRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGPPVMTEEERYEAVRHCKWVDEVVEGAPYVTTP 81 (150)
T ss_pred CeEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCCCCcCCHHHHHHHHHhcCCCCeEEECCCCCChH
Confidence 3679999999999999999999999999 999999999999987 4349999999999999999999999999998889
Q ss_pred HHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhh
Q 014671 333 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKK 403 (420)
Q Consensus 333 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k 403 (420)
+++++++||++++|+||..+ ..+.++|+.++.+|++.++++++++|||+|++||+++++.|++||..+
T Consensus 82 ~~i~~~~~d~vv~G~d~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~Stt~ii~rI~~~~~~~~~r~~~~ 149 (150)
T cd02174 82 EFLDKYKCDYVAHGDDIYLD---ADGEDCYQEVKDAGRFKEVKRTEGVSTTDLIGRILLDYRDYHRRNLQR 149 (150)
T ss_pred HHHHHhCCCEEEECCCCCCC---CCchhHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhHHHHHHhhhcc
Confidence 99999999999999999764 234678888999999999999999999999999999999999999864
No 7
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Probab=99.97 E-value=3.4e-32 Score=237.87 Aligned_cols=130 Identities=35% Similarity=0.648 Sum_probs=117.9
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
+.|+++||||+||+||+++|++||++||+|+|.+..|+++.+ |+.|||+++||++++.+|||||+|++++||+.+.++
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s~ryVD~vi~~~p~~~~~~~ 81 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVDEVILGAPWDIKFED 81 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhCCeEEEEEeccHHHHHhcCCCCCCCHHHHHHHHHcCcchheeeeCCccccChHH
Confidence 349999999999999999999999999999999999999886 555999999999999999999999999999998899
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCC------CCHHHHHHHHHh
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKS------ITTTSVAQRIIA 391 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~------~Stt~Ii~RI~~ 391 (420)
+++++||++++|+||..+ .+.+.+...+ +|.+.++.++++ +||+.|++||..
T Consensus 82 i~~~k~Div~lG~D~~~d----~~~l~~~~~k-~G~~~~v~R~~g~~~~~~~st~~i~~~i~~ 139 (140)
T COG0615 82 IEEYKPDIVVLGDDQKFD----EDDLKYELVK-RGLFVEVKRTEGVSTCELISTSDIIKRILE 139 (140)
T ss_pred HHHhCCCEEEECCCCcCC----hHHHHHHHHH-cCCeeEEEeccCcccCcccchHHHHHHHhc
Confidence 999999999999999843 4566777777 999999999988 888999998864
No 8
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism]
Probab=99.97 E-value=2.7e-32 Score=261.05 Aligned_cols=145 Identities=32% Similarity=0.635 Sum_probs=136.7
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 332 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~ 332 (420)
--.||.+|.|||||.||.+.|+|||+++ -+|||||++|+...+ ++..+|+..||++.|..|||||+||.++||.++.
T Consensus 63 PVRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~KG~TVm~e~ERyE~lrHCryVDEVi~~APW~lt~ 142 (348)
T KOG2804|consen 63 PVRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFKGRTVMNENERYEALRHCRYVDEVIPNAPWTLTP 142 (348)
T ss_pred ceEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhccCceecChHHHHHHhhhhhhhhhhccCCCccccH
Confidence 3579999999999999999999999987 699999999999988 7789999999999999999999999999999999
Q ss_pred HHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhh
Q 014671 333 DMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKK 403 (420)
Q Consensus 333 ~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k 403 (420)
+||+++++|+|+|.+..... ...+|.|+..|.+|.|+...++.|+||++||-||+..++.|.+||..+
T Consensus 143 EFL~~HKIDfVAHDdIPY~s---~gsdDiY~~vK~~G~F~~T~RTeGvSTSDiI~rIVrDYD~YvrRNL~R 210 (348)
T KOG2804|consen 143 EFLEKHKIDFVAHDDIPYVS---AGSDDIYKPVKEAGMFLPTQRTEGVSTSDIITRIVRDYDVYVRRNLAR 210 (348)
T ss_pred HHHHhcccceeeccCccccC---CCchhHHHHHHHhcccccccccCCccHHHHHHHHHHhHHHHHHhhhcc
Confidence 99999999999999886654 356799999999999999999999999999999999999999999887
No 9
>cd02174 CCT CTP:phosphocholine cytidylyltransferase. CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
Probab=99.97 E-value=1.2e-30 Score=233.82 Aligned_cols=139 Identities=60% Similarity=0.997 Sum_probs=128.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~ 142 (420)
++|||+.|+||++|.||+++|++|+++| |.|+|||++|+.+..+|++|+++++||++++++|+|||+|++..|+..+.
T Consensus 2 ~~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~Vi~~~~~~~~~ 81 (150)
T cd02174 2 PVRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGPPVMTEEERYEAVRHCKWVDEVVEGAPYVTTP 81 (150)
T ss_pred CeEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCCCCcCCHHHHHHHHHhcCCCCeEEECCCCCChH
Confidence 5689999999999999999999999999 99999999999988888889999999999999999999999998888777
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccccc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDT 207 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~~~ 207 (420)
+|+ ++++||++++|+||..+..+.+.|+.+++.|+++.+++++++|||.|++||+.....+
T Consensus 82 ~~i----~~~~~d~vv~G~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~Stt~ii~rI~~~~~~~ 142 (150)
T cd02174 82 EFL----DKYKCDYVAHGDDIYLDADGEDCYQEVKDAGRFKEVKRTEGVSTTDLIGRILLDYRDY 142 (150)
T ss_pred HHH----HHhCCCEEEECCCCCCCCCchhHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhHHHH
Confidence 776 4689999999999988777778899999999999999999999999999999875543
No 10
>KOG2803 consensus Choline phosphate cytidylyltransferase/Predicted CDP-ethanolamine synthase [Lipid transport and metabolism]
Probab=99.97 E-value=1.4e-31 Score=257.65 Aligned_cols=136 Identities=30% Similarity=0.499 Sum_probs=126.4
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHHH
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMI 335 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i 335 (420)
-.||++||||++|.||.+.|+|||++||+|||||++|+.+.. +..|+|+++||++++.+|||||+||.++|+.++.+++
T Consensus 9 ~rVw~DGCfDm~HyGHanaLrQAkalGdkLivGVHsDeeI~~nKGpPV~t~eERy~~v~~ikWVDEVV~~APyvtt~~~m 88 (358)
T KOG2803|consen 9 VRVWADGCFDMVHYGHANALRQAKALGDKLIVGVHSDEEITLNKGPPVFTDEERYEMVKAIKWVDEVVEGAPYVTTLEWM 88 (358)
T ss_pred eeEEeccchhhhhhhhhHHHHHHHHhCCeEEEEecchHHHHhcCCCCcccHHHHHHHHhhcchhhhhhcCCCeeccHHHH
Confidence 359999999999999999999999999999999999999988 5559999999999999999999999999999999999
Q ss_pred hhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHh
Q 014671 336 TTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEA 395 (420)
Q Consensus 336 ~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~ 395 (420)
+++++|++|||+|... ++.+.|.|...|.+|++.+++++.|+|||+|+.|++.-...
T Consensus 89 d~y~cd~vvHGdDit~---~a~G~D~Y~~vK~agrykevKRT~GVSTTelvgRmll~~~~ 145 (358)
T KOG2803|consen 89 DKYGCDYVVHGDDITL---DADGLDCYRLVKAAGRYKEVKRTEGVSTTELVGRMLLKKRN 145 (358)
T ss_pred HHhCCeEEEeCCccee---cCCCccHHHHHHHhcchheeeeccCcchhhhhhHhhhhccC
Confidence 9999999999998544 36789999999999999999999999999999998764433
No 11
>PLN02413 choline-phosphate cytidylyltransferase
Probab=99.97 E-value=1.1e-29 Score=244.48 Aligned_cols=141 Identities=43% Similarity=0.767 Sum_probs=127.6
Q ss_pred CCCCceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCc
Q 014671 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPY 138 (420)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~ 138 (420)
...++.+||++||||++|.||+++|++|+++| +.|+|||++|+.+...|++|+++++||+++|++|+|||+|++++||
T Consensus 23 ~~~r~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KGrPIm~~~ER~e~V~acKyVDeVV~~aP~ 102 (294)
T PLN02413 23 PSDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPW 102 (294)
T ss_pred CCCCceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCCCCCCCHHHHHHHHHhcccccEEeeCCCc
Confidence 45678899999999999999999999999996 7999999999999889999999999999999999999999999999
Q ss_pred cccHHHHHHHHhhcCccEEEEcCCCCCC--CCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccc
Q 014671 139 AITEQFMNRLFNEHKIDYIIHGDDPCLL--PDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (420)
Q Consensus 139 ~~~~~fl~~ll~~~~~d~vV~G~D~~~g--~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~ 205 (420)
..+++|++ +++||++|||++.... ..+.+.|..+++.|++..++|++++|||+|++||+..+.
T Consensus 103 ~~t~efI~----~~kpDiVvhGd~~~~d~~~~g~D~Y~~vK~~G~f~~i~Rt~gvSTTdII~RIlk~y~ 167 (294)
T PLN02413 103 VITQEFLD----KHRIDYVAHDALPYADASGAGKDVYEFVKKIGKFKETKRTDGISTSDIIMRIVKDYN 167 (294)
T ss_pred cccHHHHH----HhCCCEEEECCCCCccccccCchhHHHHHHCCeEEEecCCCCcCHHHHHHHHHHHHH
Confidence 98888885 6899999999854432 245678999999999999999999999999999997644
No 12
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Probab=99.96 E-value=1.2e-29 Score=221.85 Aligned_cols=131 Identities=44% Similarity=0.724 Sum_probs=116.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhh-cCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~-~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
++||+.||||++|.||+++|+||+++||+|+|++..|+.+.. +|++|+++++||++++++|+|||+|++++||.++.++
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s~ryVD~vi~~~p~~~~~~~ 81 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVDEVILGAPWDIKFED 81 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhCCeEEEEEeccHHHHHhcCCCCCCCHHHHHHHHHcCcchheeeeCCccccChHH
Confidence 579999999999999999999999999999999999988765 6669999999999999999999999999999998887
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCC------CChHHHHHHHHh
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEG------VSSTDIVGRILS 202 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~------ISST~Ir~rI~~ 202 (420)
++ +++||+|++|+||. +..+...|...+ .|.+..++|+++ +||++|++++..
T Consensus 82 i~----~~k~Div~lG~D~~-~d~~~l~~~~~k-~G~~~~v~R~~g~~~~~~~st~~i~~~i~~ 139 (140)
T COG0615 82 IE----EYKPDIVVLGDDQK-FDEDDLKYELVK-RGLFVEVKRTEGVSTCELISTSDIIKRILE 139 (140)
T ss_pred HH----HhCCCEEEECCCCc-CChHHHHHHHHH-cCCeeEEEeccCcccCcccchHHHHHHHhc
Confidence 74 78999999999999 555555565555 999999999987 899999998863
No 13
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Probab=99.96 E-value=1.4e-29 Score=257.68 Aligned_cols=135 Identities=32% Similarity=0.627 Sum_probs=123.1
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchH
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 332 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~ 332 (420)
+...+||++||||++|.||+++|++|+++||+|||||++|+.+.+ ++.|+|+++||+++|++|+|||+|++++|+.++.
T Consensus 51 ~~~~rV~~~G~FDllH~GH~~~L~qAk~lGd~LIVGV~SDe~i~~~Kg~PV~~~eER~~~v~alk~VD~Vv~~apy~~~~ 130 (418)
T PLN02406 51 KKPVRVYMDGCFDMMHYGHANALRQARALGDELVVGVVSDEEIIANKGPPVTPMHERMIMVSGVKWVDEVIPDAPYAITE 130 (418)
T ss_pred CCceEEEEcCeeCCCCHHHHHHHHHHHHhCCEEEEEEecChhhhccCCCCcCCHHHHHHHHHhcCCCceEEeCCccccch
Confidence 345789999999999999999999999999999999999999987 4459999999999999999999999999998877
Q ss_pred HHH----hhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHh
Q 014671 333 DMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 391 (420)
Q Consensus 333 ~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~ 391 (420)
+++ ++++||++|||+||... +.+.|.|.+.+.+|++.++++++++|||+|++||+.
T Consensus 131 d~~~~li~~~~~D~vVhGdD~~~~---~~g~d~y~~~k~~Gr~~~i~rt~GvSTTdIv~Ril~ 190 (418)
T PLN02406 131 EFMNKLFNEYNIDYIIHGDDPCLL---PDGTDAYALAKKAGRYKQIKRTEGVSSTDIVGRMLL 190 (418)
T ss_pred HHHHHHHHHhCCCEEEECCCcccc---CCchHHHHHHHhCCEEEEEecCCCCCHHHHHHHHHH
Confidence 766 48999999999998642 456788999999999999999999999999999985
No 14
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT). CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
Probab=99.96 E-value=5.7e-28 Score=217.09 Aligned_cols=135 Identities=40% Similarity=0.723 Sum_probs=122.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhccccccEEEeCCCccccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~ 142 (420)
.++||+.|+||++|.||+++|++|+++||.|+|||++|+.+...|+ .|+++++||++++++|+|||+|++..|+.++.
T Consensus 2 ~~iv~~~G~FD~~H~GHi~~L~~A~~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~~~~Vd~V~v~~~~~~~~ 81 (152)
T cd02173 2 DKVVYVDGAFDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDEVVIGAPYVITK 81 (152)
T ss_pred CeEEEEcCcccCCCHHHHHHHHHHHHcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHhcCCCCEEEECCCCcchH
Confidence 4689999999999999999999999999999999999999887776 69999999999999999999999988887766
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCC--CCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLL--PDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g--~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
+|+ ++++||++++|.||... ..+.+.|..+++.|.+..+++++++|||+|++||+..
T Consensus 82 ~~~----~~~~~d~vv~G~d~~~~~~~~~~~~~~~~~~~G~~~~v~~~~~~Sts~Ii~rI~~~ 140 (152)
T cd02173 82 ELI----EHFKIDVVVHGKTEETPDSLDGEDPYAVPKEMGIFKEIDSGSDLTTRDIVNRIIKN 140 (152)
T ss_pred HHH----HHhCCCEEEECCCCccccccCchHHHHHHHhCCeEEEecCCCCCCHHHHHHHHHHh
Confidence 766 57899999999999754 3456779999999999999999999999999999865
No 15
>KOG2804 consensus Phosphorylcholine transferase/cholinephosphate cytidylyltransferase [Lipid transport and metabolism]
Probab=99.95 E-value=1.8e-28 Score=234.95 Aligned_cols=140 Identities=44% Similarity=0.712 Sum_probs=130.9
Q ss_pred CCCceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCcc
Q 014671 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYA 139 (420)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~ 139 (420)
..++.|||++|.||++|.||++.|+||+++. -+|+|||.+|+...+.||..||+..||++.|++|+|||+|+.++||.
T Consensus 60 ~~RPVRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~KG~TVm~e~ERyE~lrHCryVDEVi~~APW~ 139 (348)
T KOG2804|consen 60 TDRPVRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFKGRTVMNENERYEALRHCRYVDEVIPNAPWT 139 (348)
T ss_pred CCCceEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhccCceecChHHHHHHhhhhhhhhhhccCCCcc
Confidence 5788999999999999999999999999998 58999999999988999999999999999999999999999999999
Q ss_pred ccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccc
Q 014671 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (420)
Q Consensus 140 ~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~ 205 (420)
++++||+ ++++|+|+|.+-+..+.+..+.|..+|+.|++++..||+||||++|+-||...+.
T Consensus 140 lt~EFL~----~HKIDfVAHDdIPY~s~gsdDiY~~vK~~G~F~~T~RTeGvSTSDiI~rIVrDYD 201 (348)
T KOG2804|consen 140 LTPEFLE----KHKIDFVAHDDIPYVSAGSDDIYKPVKEAGMFLPTQRTEGVSTSDIITRIVRDYD 201 (348)
T ss_pred ccHHHHH----hcccceeeccCccccCCCchhHHHHHHHhcccccccccCCccHHHHHHHHHHhHH
Confidence 9999985 6899999999888776666778999999999999999999999999999987653
No 16
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Probab=99.95 E-value=8.9e-28 Score=242.09 Aligned_cols=141 Identities=30% Similarity=0.554 Sum_probs=127.4
Q ss_pred CCCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCC
Q 014671 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWE 329 (420)
Q Consensus 251 ~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~ 329 (420)
...++.++||++|+||++|.||+++|++|+++||.|+||+++|+.+.+ ++.|+|+++||+++|++|+|||+|+++.|+.
T Consensus 6 ~~~~~~~~v~~~G~FD~vH~GH~~~L~qAk~~g~~Livgv~~d~~i~~~K~~pi~~~eeR~~~l~~~~~VD~Vv~~~p~~ 85 (353)
T PTZ00308 6 PKKPGTIRVWVDGCFDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGPPVMHQEERYEALRACKWVDEVVEGYPYT 85 (353)
T ss_pred CCCCCcEEEEEEeecccCCHHHHHHHHHHHHhCCEEEEEeCCHHHHhhcCCCCCCCHHHHHHHHHhcCCccEEEECCCCC
Confidence 344567899999999999999999999999999999999999999977 4459999999999999999999999988888
Q ss_pred chHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchH
Q 014671 330 VTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHE 394 (420)
Q Consensus 330 ~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~ 394 (420)
.+.+++++++||++|+|+||..+ ..+.+.|..++..|++.++++++++|||+|++||+....
T Consensus 86 ~~~~fI~~l~~d~vv~GdD~~~g---~~g~~~~~~lk~~G~~~~v~rt~g~STt~ii~ril~~~~ 147 (353)
T PTZ00308 86 TRLEDLERLECDFVVHGDDISVD---LNGRNSYQEIIDAGKFKVVKRTEGISTTDLVGRMLLCTK 147 (353)
T ss_pred chHHHHHHhCCCEEEECCCCCCC---CCccchHHHHHhCCeEEEEecCCCCCHHHHHHHHHHhhh
Confidence 88889999999999999998765 345677889999999999999999999999999986433
No 17
>cd02170 cytidylyltransferase cytidylyltransferase. The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
Probab=99.95 E-value=8.8e-27 Score=205.08 Aligned_cols=133 Identities=44% Similarity=0.675 Sum_probs=119.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
+++|+++|+||++|.||+.+|++|+++++.++|++++|+.+.+.|++|+++.+||++++++|+|||.++...|++ |
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~l~v~v~~~~~~~~~~~~~~~~~~eR~~~l~~~~~vd~v~~~~~~~----~ 76 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKRRPILPEEQRAEVVEALKYVDEVILGHPWS----Y 76 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECCcHHHHhcCCCCCCCHHHHHHHHHcCCCcCEEEECCCCC----H
Confidence 468999999999999999999999999999999999998776666679999999999999999999999877664 4
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEec--cCCCCChHHHHHHHHh
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK--RTEGVSSTDIVGRILS 202 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~--r~~~ISST~Ir~rI~~ 202 (420)
++.+ .+++++++|+|+||.||.++++.++.+++.|..+.+. ++.++|||.||++|+.
T Consensus 77 ~~~l-~~~~~~~vv~G~d~~fg~~~~~~~~~l~~~g~~~~~~~~~~~~vSSt~Ir~~i~~ 135 (136)
T cd02170 77 FKPL-EELKPDVIVLGDDQKNGVDEEEVYEELKKRGKVIEVPRKKTEGISSSDIIKRILE 135 (136)
T ss_pred hHHH-HHHCCCEEEECCCCCCCCcchhHHHHHHHCCeEEEECCCCCCCCcHHHHHHHHHh
Confidence 4433 4578999999999999999999999999999988888 7788999999999964
No 18
>cd02172 RfaE_N N-terminal domain of RfaE. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
Probab=99.95 E-value=9.1e-27 Score=207.57 Aligned_cols=135 Identities=24% Similarity=0.370 Sum_probs=117.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
.++|+++|+||++|.||+++|++|+++|+.++|++++|+.+.+.+.+|++|.+||++++++++|||.++.. |+...++|
T Consensus 4 ~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~vv~~~~d~~~~~~~~~~i~~~~eR~~~l~~lg~VD~vi~~-~~~~~~~f 82 (144)
T cd02172 4 KTVVLCHGVFDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGPGRPIFPEDLRAEVLAALGFVDYVVLF-DNPTALEI 82 (144)
T ss_pred CEEEEEecccCCCCHHHHHHHHHHHHhCCeEEEEEeChHHhccCCCCCCCCHHHHHHHHHccCCccEEEEC-CCCCHHHH
Confidence 46899999999999999999999999999999999999877655557999999999999999999999984 55445677
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCC-----ccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhcc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDG-----TDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSM 204 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g-----~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~ 204 (420)
++ +++++++|+|+||+||.++ .+.++.+++.|....+.+++++|||+|++||+..+
T Consensus 83 i~----~l~~~~vv~G~d~~fg~~~~~~~~~g~~~~l~~~g~~~~~~~~~~~sts~li~~i~~~~ 143 (144)
T cd02172 83 ID----ALQPNIYVKGGDYENPENDVTGKIAPEAEAVKAYGGKIVFTGEIVFSSSALINRIFDEL 143 (144)
T ss_pred HH----HhCCCEEEECCCcccCccccccchhhhHHHHHHhCCEEEEecCCCcchHHHHHHHHhhc
Confidence 74 6899999999999999875 67888999887654444999999999999998653
No 19
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=7.6e-26 Score=225.25 Aligned_cols=133 Identities=29% Similarity=0.415 Sum_probs=118.9
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CCC-CCCCHHHHHHhhhhccccceEEEcCCCCch
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SYH-PIMHLHERSLSVLACRYVDEVIIGAPWEVT 331 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~~-pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~ 331 (420)
..++|+++||||++|.||+.||.+||++||.||||+++|.++++ |.. ||.+++.|+.++.++..||.|++++. +++
T Consensus 331 ~~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~L~~VD~vV~F~e-dTP 409 (467)
T COG2870 331 GKKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDLVVIFDE-DTP 409 (467)
T ss_pred cCeEEEecchhhhccccHHHHHHHHHhhCCeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhhcccceEEEEecC-CCH
Confidence 35699999999999999999999999999999999999999998 555 99999999999999999999999885 567
Q ss_pred HHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhc
Q 014671 332 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIAN 392 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~ 392 (420)
.++|+.++||++|+|.||..+.. .+. ..+..++|.+..++...+.|||.||++|.+.
T Consensus 410 ~~LI~~~~PdilVKGgDy~~~~i--~g~--~~v~~~GG~v~~i~f~~g~STt~ii~ki~~~ 466 (467)
T COG2870 410 EELIEAVKPDILVKGGDYKIEKI--VGA--DIVEAYGGEVLLIPFEEGKSTTKIIEKIRAK 466 (467)
T ss_pred HHHHHHhCcceEEccCCCChhhc--cch--hhhhhcCCeEEEEecccCCcHHHHHHHHhcc
Confidence 89999999999999999977643 222 2456789999999999999999999999653
No 20
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=99.93 E-value=3.1e-25 Score=197.70 Aligned_cols=130 Identities=35% Similarity=0.535 Sum_probs=109.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhccccccEEEeCCCccccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~ 142 (420)
.++|+++|+||++|.||+++|++|+++|+.++|++++|+.....++ +|+++.+||.+++++|+|||+++...+. ..+
T Consensus 11 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~~~VD~vi~f~~~-~~~ 89 (144)
T TIGR02199 11 KKIVFTNGCFDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDYVVIFDED-TPE 89 (144)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHhCCccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhcCCCCEEEECCCC-CHH
Confidence 5689999999999999999999999999999999999997654444 6899999999999999999999984332 235
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhC-CeEEEeccCCCCChHHHHHHHH
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV-GRYKQIKRTEGVSSTDIVGRIL 201 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~-g~~~~v~r~~~ISST~Ir~rI~ 201 (420)
+|+ ++++++++|+|+||++.. ...++.+++. +++..+++++++|||+||+||+
T Consensus 90 ~fi----~~l~~~~vv~G~d~~~~~--~~~~~~~~~~g~~v~~~~~~~~iSSs~Ir~ri~ 143 (144)
T TIGR02199 90 ELI----GELKPDILVKGGDYKVET--LVGAELVESYGGQVVLLPFVEGRSTTAIIEKIL 143 (144)
T ss_pred HHH----HHhCCCEEEECCCCCCCc--chhHHHHHHcCCEEEEEeCCCCcCHHHHHHHHh
Confidence 666 468999999999998833 2234556655 5899999999999999999996
No 21
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=99.92 E-value=1.5e-24 Score=189.13 Aligned_cols=128 Identities=32% Similarity=0.496 Sum_probs=108.4
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
+++|+++|+||++|.||+.+|++|+++++.+++++++|+.....+.++++|++||++++++++|||+++...++ ++|
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~l~v~v~~d~~~~~~~~~~~~~~~~R~~~l~~~~~vd~v~~~~~~---~~f 77 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALGDKLIVAVSTDEFNAGKGKKAVIPYEQRAEILESIRYVDLVIPETNW---EQK 77 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhCCEEEEEEeccHhHHhcCCCCCCCHHHHHHHHHcCCccCEEecCCCc---cCh
Confidence 45899999999999999999999999999999999998743322336899999999999999999999754333 345
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHh
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~ 202 (420)
++.+ ++++++++++|+|| .++++.+++.+++..++++.++|||.||++|..
T Consensus 78 ~~~~-~~l~~~~vv~G~d~------~g~~~~l~~~~~v~~~~~~~~iSSt~Ir~~i~~ 128 (129)
T cd02171 78 IEDI-KKYNVDVFVMGDDW------EGKFDFLKEYCEVVYLPRTKGISSTQLKEMLKK 128 (129)
T ss_pred HHHH-HHhCCCEEEECCCC------cchHHHHHhCcEEEEeCCCCCcChHHHHHHHhh
Confidence 5543 67999999999999 356788999999999999889999999999863
No 22
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
Probab=99.92 E-value=1.3e-24 Score=188.93 Aligned_cols=123 Identities=35% Similarity=0.508 Sum_probs=102.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHHHHH
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNR 147 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~fl~~ 147 (420)
|++.|+||++|.||+++|++|+++|+.++|++++|+.....+.+|+++.+||++++++|+|||.+++..|+ ++|++.
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~~~~iv~v~~d~~~~~~~~~~i~~~eeR~~~l~~~~~Vd~vi~~~~~---~~f~~~ 77 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQKKAYHSYEHRKLILETIRYVDLVIPEKSW---EQKKQD 77 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcCCEEEEEEechHHHhhcCCCCCCCHHHHHHHHHcCCCccEEecCCCc---cchHHH
Confidence 57999999999999999999999999999999999876544558899999999999999999999775544 345554
Q ss_pred HHhhcCccEEEEcCCCCCCCCCccHHHHHHhC--CeEEEeccCCCCChHHHHHHH
Q 014671 148 LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRI 200 (420)
Q Consensus 148 ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~--g~~~~v~r~~~ISST~Ir~rI 200 (420)
+ ++++|+++++|+||. ++++.+++. .++..+++++++|||.||+.|
T Consensus 78 l-~~~~~~~vv~G~D~~------g~~~~l~~~~~~~v~~v~~~~~vSST~Ir~~~ 125 (125)
T TIGR01518 78 I-IDFNIDVFVMGDDWE------GKFDFLKDECPLKVVYLPRTEGVSTTKIKKEI 125 (125)
T ss_pred H-HHcCCCEEEECCCcc------chHHHHhhccCcEEEEeCCCCCccHHHHHhhC
Confidence 3 689999999999992 455666654 356778889999999999864
No 23
>cd02172 RfaE_N N-terminal domain of RfaE. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
Probab=99.91 E-value=9.8e-24 Score=188.06 Aligned_cols=138 Identities=25% Similarity=0.335 Sum_probs=114.5
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchH
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 332 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~ 332 (420)
+++++|++.|+||++|.||..+|++|+++++.++|++++|+.++. +..|+++++||++++++|+|||.|++.+ ...++
T Consensus 2 ~~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~vv~~~~d~~~~~~~~~~i~~~~eR~~~l~~lg~VD~vi~~~-~~~~~ 80 (144)
T cd02172 2 RGKTVVLCHGVFDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGPGRPIFPEDLRAEVLAALGFVDYVVLFD-NPTAL 80 (144)
T ss_pred CCCEEEEEecccCCCCHHHHHHHHHHHHhCCeEEEEEeChHHhccCCCCCCCCHHHHHHHHHccCCccEEEECC-CCCHH
Confidence 356899999999999999999999999999999999999987766 3359999999999999999999999864 45678
Q ss_pred HHHhhcCccEEEEcCCcCCCCCC---CCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014671 333 DMITTFNICLVVHGTVSETNTPL---TGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 333 ~~i~~~~~d~vv~G~d~~~~~~~---~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
+++++++|+++|+|.||....-. ....+...+.+.+|.+.+. +++++|||+|++||+.++
T Consensus 81 ~fi~~l~~~~vv~G~d~~fg~~~~~~~~~g~~~~l~~~g~~~~~~-~~~~~sts~li~~i~~~~ 143 (144)
T cd02172 81 EIIDALQPNIYVKGGDYENPENDVTGKIAPEAEAVKAYGGKIVFT-GEIVFSSSALINRIFDEL 143 (144)
T ss_pred HHHHHhCCCEEEECCCcccCccccccchhhhHHHHHHhCCEEEEe-cCCCcchHHHHHHHHhhc
Confidence 99999999999999998764210 0112233445555666777 999999999999998875
No 24
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=99.91 E-value=8.9e-24 Score=188.34 Aligned_cols=131 Identities=30% Similarity=0.429 Sum_probs=113.4
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CC-CCCCCHHHHHHhhhhccccceEEEcCCCCch
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SY-HPIMHLHERSLSVLACRYVDEVIIGAPWEVT 331 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~-~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~ 331 (420)
++++|++.|+||.+|.||..+|++|+++|+.++|||+.|+.... +. .|+++++||++++++|++||.|+++++. .+
T Consensus 10 ~~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~~~VD~vi~f~~~-~~ 88 (144)
T TIGR02199 10 GKKIVFTNGCFDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDYVVIFDED-TP 88 (144)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHhCCccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhcCCCCEEEECCCC-CH
Confidence 46899999999999999999999999999999999999998764 33 4899999999999999999999997654 56
Q ss_pred HHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHH-hCCeEEEeCCCCCCCHHHHHHHHHh
Q 014671 332 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAK-SMGIFQLLESPKSITTTSVAQRIIA 391 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k-~~G~~~~~~~~~~~Stt~Ii~RI~~ 391 (420)
++|++.++|+++|+|.||..+. ...+...+ .+|++..+++++++|||.|++||++
T Consensus 89 ~~fi~~l~~~~vv~G~d~~~~~-----~~~~~~~~~~g~~v~~~~~~~~iSSs~Ir~ri~~ 144 (144)
T TIGR02199 89 EELIGELKPDILVKGGDYKVET-----LVGAELVESYGGQVVLLPFVEGRSTTAIIEKILK 144 (144)
T ss_pred HHHHHHhCCCEEEECCCCCCCc-----chhHHHHHHcCCEEEEEeCCCCcCHHHHHHHHhC
Confidence 8999999999999999987643 12234444 4568999999999999999999963
No 25
>cd02170 cytidylyltransferase cytidylyltransferase. The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
Probab=99.90 E-value=6.1e-23 Score=180.66 Aligned_cols=132 Identities=32% Similarity=0.605 Sum_probs=115.0
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
+++|++.|+||++|.||+.+|++|++++|.++|+++.|..++. ++.|+++.+||++++++|++||.|++.+|++... .
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~l~v~v~~~~~~~~~~~~~~~~~~eR~~~l~~~~~vd~v~~~~~~~~~~-~ 79 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKRRPILPEEQRAEVVEALKYVDEVILGHPWSYFK-P 79 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECCcHHHHhcCCCCCCCHHHHHHHHHcCCCcCEEEECCCCCHhH-H
Confidence 4789999999999999999999999999999999999987765 4459999999999999999999999999887654 5
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeC--CCCCCCHHHHHHHHHh
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLE--SPKSITTTSVAQRIIA 391 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~--~~~~~Stt~Ii~RI~~ 391 (420)
+.+++||+++.|.||..+ ......+..+++.|..+.+. .+..+|||.|+++|+.
T Consensus 80 l~~~~~~~vv~G~d~~fg---~~~~~~~~~l~~~g~~~~~~~~~~~~vSSt~Ir~~i~~ 135 (136)
T cd02170 80 LEELKPDVIVLGDDQKNG---VDEEEVYEELKKRGKVIEVPRKKTEGISSSDIIKRILE 135 (136)
T ss_pred HHHHCCCEEEECCCCCCC---CcchhHHHHHHHCCeEEEECCCCCCCCcHHHHHHHHHh
Confidence 678999999999998664 23344567788889988888 8889999999999853
No 26
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.89 E-value=1.3e-22 Score=212.52 Aligned_cols=133 Identities=28% Similarity=0.387 Sum_probs=118.0
Q ss_pred CCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC--CC-CCCCCHHHHHHhhhhccccceEEEcCCCC
Q 014671 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG--SY-HPIMHLHERSLSVLACRYVDEVIIGAPWE 329 (420)
Q Consensus 253 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~--~~-~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~ 329 (420)
..++++|++.|+||++|.||+++|++|+++||+|+|||++|+.+++ +. .|+++++||.+.+++|++||+|+..+ ..
T Consensus 337 ~~~~~iv~~~G~fD~~H~GH~~~l~~a~~~~~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~~~~vd~v~~~~-~~ 415 (473)
T PRK11316 337 ARGEKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDWVVPFE-ED 415 (473)
T ss_pred hcCCeEEEEecccccCCHHHHHHHHHHHHhCCeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHhcCcCCEEEeCC-CC
Confidence 3457999999999999999999999999999999999999999976 43 39999999999999999999998876 44
Q ss_pred chHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q 014671 330 VTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 390 (420)
Q Consensus 330 ~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~ 390 (420)
.+.+++++++||++++|+||..+. ....+.+.+.+|+++++++++++|||+|++||.
T Consensus 416 ~~~~~~~~~~~d~vv~G~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~st~~i~~ri~ 472 (473)
T PRK11316 416 TPQRLIAEILPDLLVKGGDYKPEE----IAGSKEVWANGGEVKVLNFEDGCSTTNIIKKIR 472 (473)
T ss_pred CHHHHHHHhCCCEEEECCCCCCCc----cccHHHHHHcCCEEEEEcCCCCcCHHHHHHHHh
Confidence 678999999999999999986542 133567788999999999999999999999995
No 27
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
Probab=99.88 E-value=2.5e-22 Score=174.59 Aligned_cols=123 Identities=33% Similarity=0.481 Sum_probs=103.2
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHHHhh
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITT 337 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i~~ 337 (420)
|++.|+||++|.||.++|++|+++|++++|||++|+.... ++.|+++++||++++++|+|||.|+++.++....+.++.
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~~~~iv~v~~d~~~~~~~~~~i~~~eeR~~~l~~~~~Vd~vi~~~~~~~f~~~l~~ 80 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQKKAYHSYEHRKLILETIRYVDLVIPEKSWEQKKQDIID 80 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcCCEEEEEEechHHHhhcCCCCCCCHHHHHHHHHcCCCccEEecCCCccchHHHHHH
Confidence 5789999999999999999999999999999999987665 455999999999999999999999888887777777899
Q ss_pred cCccEEEEcCCcCCCCCCCCCCChHHHHHh-CCeEEEeCCCCCCCHHHHHHHH
Q 014671 338 FNICLVVHGTVSETNTPLTGQSDPYEVAKS-MGIFQLLESPKSITTTSVAQRI 389 (420)
Q Consensus 338 ~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~-~G~~~~~~~~~~~Stt~Ii~RI 389 (420)
++||++++|.||..+ .+ .+.+. ++....++++..+|||.|++.|
T Consensus 81 ~~~~~vv~G~D~~g~------~~--~l~~~~~~~v~~v~~~~~vSST~Ir~~~ 125 (125)
T TIGR01518 81 FNIDVFVMGDDWEGK------FD--FLKDECPLKVVYLPRTEGVSTTKIKKEI 125 (125)
T ss_pred cCCCEEEECCCccch------HH--HHhhccCcEEEEeCCCCCccHHHHHhhC
Confidence 999999999998432 11 11122 3456678888899999998764
No 28
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
Probab=99.87 E-value=1.3e-21 Score=170.69 Aligned_cols=127 Identities=30% Similarity=0.493 Sum_probs=108.6
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
+++|++.|+||++|.||..+|++|+++++.|+|+|++|+.... ++.|++|++||++++++|++||.|+.+.++....+.
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~l~v~v~~d~~~~~~~~~~~~~~~~R~~~l~~~~~vd~v~~~~~~~~f~~~ 80 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALGDKLIVAVSTDEFNAGKGKKAVIPYEQRAEILESIRYVDLVIPETNWEQKIED 80 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhCCEEEEEEeccHhHHhcCCCCCCCHHHHHHHHHcCCccCEEecCCCccChHHH
Confidence 4689999999999999999999999999999999999975433 445999999999999999999999877666656666
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHh
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 391 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~ 391 (420)
++.++|+++++|.||..+ ++.+++.|.+..++.+..+|||.|.+.|.+
T Consensus 81 ~~~l~~~~vv~G~d~~g~---------~~~l~~~~~v~~~~~~~~iSSt~Ir~~i~~ 128 (129)
T cd02171 81 IKKYNVDVFVMGDDWEGK---------FDFLKEYCEVVYLPRTKGISSTQLKEMLKK 128 (129)
T ss_pred HHHhCCCEEEECCCCcch---------HHHHHhCcEEEEeCCCCCcChHHHHHHHhh
Confidence 788999999999987322 355677788889999999999999998853
No 29
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=99.86 E-value=2.5e-21 Score=178.63 Aligned_cols=134 Identities=25% Similarity=0.365 Sum_probs=104.3
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCC---eEEEEEecchh--hh--hcCC-CCCCcHHHHHHHHhccccccEEEeCCCcc
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGD---ELVVGVVSDEE--II--ANKG-PPVLSMEERLALVSGLKWVDEVIANAPYA 139 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd---~LiVgV~sd~~--i~--~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~~ 139 (420)
|++.|+|||+|.||+.+|++|+++|+ ...+.++.++. .. ..+. .++++.++|+++++++. ||+++. .|++
T Consensus 2 vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l~-vd~v~~-~~f~ 79 (180)
T cd02064 2 VVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESLG-VDYLLV-LPFD 79 (180)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHcC-CCEEEE-eCCC
Confidence 78999999999999999999999975 24444554443 21 2222 67999999999999985 999998 3442
Q ss_pred -----cc-HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC-----eEEEeccC----CCCChHHHHHHHHhc
Q 014671 140 -----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-----RYKQIKRT----EGVSSTDIVGRILSS 203 (420)
Q Consensus 140 -----~~-~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-----~~~~v~r~----~~ISST~Ir~rI~~~ 203 (420)
.+ ++|+++++.+.+++++|+|+||+||.++.++.+.|++.+ ++..++.. ..||||.||+.|.++
T Consensus 80 ~~~~~~s~~~Fi~~il~~~~~~~ivvG~Df~FG~~~~g~~~~L~~~~~~~g~~v~~v~~~~~~~~~iSST~IR~~i~~G 158 (180)
T cd02064 80 KEFASLSAEEFVEDLLVKLNAKHVVVGFDFRFGKGRSGDAELLKELGKKYGFEVTVVPPVTLDGERVSSTRIREALAEG 158 (180)
T ss_pred HHHHcCCHHHHHHHHHhhcCCeEEEEccCCCCCCCCCCCHHHHHHhhhhcCcEEEEeCcEecCCcEEcHHHHHHHHHhC
Confidence 12 478888776669999999999999999999888776643 35566653 469999999999865
No 30
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=99.85 E-value=5.7e-21 Score=200.18 Aligned_cols=133 Identities=30% Similarity=0.454 Sum_probs=113.4
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhccccccEEEeCCCcccc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT 141 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~ 141 (420)
..++|++.|+||++|.||+++|++|+++|+.++|||++|+.+...|+ .|++++++|.+++++|++||++++.. ....
T Consensus 339 ~~~iv~~~G~fD~~H~GH~~~l~~a~~~~~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~~~~vd~v~~~~-~~~~ 417 (473)
T PRK11316 339 GEKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDWVVPFE-EDTP 417 (473)
T ss_pred CCeEEEEecccccCCHHHHHHHHHHHHhCCeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHhcCcCCEEEeCC-CCCH
Confidence 36889999999999999999999999999999999999998876675 68999999999999999999998732 2223
Q ss_pred HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHh
Q 014671 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (420)
Q Consensus 142 ~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~ 202 (420)
.+|+ ++++||++++|+||.+... .+.+...+.+|+++.+++++++|||+|++||.+
T Consensus 418 ~~~~----~~~~~d~vv~G~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~st~~i~~ri~~ 473 (473)
T PRK11316 418 QRLI----AEILPDLLVKGGDYKPEEI-AGSKEVWANGGEVKVLNFEDGCSTTNIIKKIRQ 473 (473)
T ss_pred HHHH----HHhCCCEEEECCCCCCCcc-ccHHHHHHcCCEEEEEcCCCCcCHHHHHHHHhC
Confidence 4554 5678999999999987532 345566678899999999999999999999963
No 31
>PRK07143 hypothetical protein; Provisional
Probab=99.85 E-value=1.1e-20 Score=185.28 Aligned_cols=137 Identities=16% Similarity=0.258 Sum_probs=111.3
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CCCCCCcHHHHHHHHhccccccEEEeCCCcc---
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KGPPVLSMEERLALVSGLKWVDEVIANAPYA--- 139 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~--- 139 (420)
+.+.|+++|+|||+|.||+.||++|++.++.++|...++|..... +.+++++.+||.++++++ ++|.++. .||+
T Consensus 14 ~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~~~~vV~tF~~P~~~~~~~~~~l~~~~er~~~l~~~-Gvd~~~~-~~F~~~~ 91 (279)
T PRK07143 14 FEKPTFVLGGFESFHLGHLELFKKAKESNDEIVIVIFKNPENLPKNTNKKFSDLNSRLQTLANL-GFKNIIL-LDFNEEL 91 (279)
T ss_pred CCCeEEEEccCCcCCHHHHHHHHHHHHCCCcEEEEEeCChHHhcccCcccCCCHHHHHHHHHHC-CCCEEEE-eCCCHHH
Confidence 345799999999999999999999999988777766666543222 225699999999999998 7898887 3443
Q ss_pred ---ccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEecc----CCCCChHHHHHHHHhc
Q 014671 140 ---ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKR----TEGVSSTDIVGRILSS 203 (420)
Q Consensus 140 ---~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r----~~~ISST~Ir~rI~~~ 203 (420)
..++|+++++. ++++.||+|+||+||+++.++++.|++.+ .+..++. ...||||.||+.|.++
T Consensus 92 a~ls~e~Fi~~ll~-l~~~~iVvG~Df~FG~~r~G~~~~L~~~~~~v~~v~~~~~~g~~ISST~IR~~l~~G 162 (279)
T PRK07143 92 QNLSGNDFIEKLTK-NQVSFFVVGKDFRFGKNASWNADDLKEYFPNVHIVEILKINQQKISTSLLKEFIEFG 162 (279)
T ss_pred hCCCHHHHHHHHHh-cCCCEEEECCCcccCCCCCCCHHHHHHhCCcEEEeCCEEcCCcEEcHHHHHHHHHcC
Confidence 12589988774 99999999999999999999999999988 5665553 2359999999999865
No 32
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=99.83 E-value=3.5e-20 Score=184.06 Aligned_cols=135 Identities=24% Similarity=0.332 Sum_probs=106.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeE---EEEEecchhh---h-hcCC-CCCCcHHHHHHHHhccccccEEEeCCCc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDEL---VVGVVSDEEI---I-ANKG-PPVLSMEERLALVSGLKWVDEVIANAPY 138 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~L---iVgV~sd~~i---~-~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~ 138 (420)
.|+++|+|||+|.||+++|++|+++|+.+ .+.++.|+.. . ..+. +++++.+||.++++++ +||.++. .||
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~-gVD~~~~-~~F 92 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAEL-GVDYVLV-LPF 92 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHc-CCCEEEE-ecC
Confidence 79999999999999999999999998643 3345555432 1 1222 6799999999999999 4999997 455
Q ss_pred c------ccHHHHHHHH-hhcCccEEEEcCCCCCCCCCccHHHHHHhCC-----eEEEecc----CCCCChHHHHHHHHh
Q 014671 139 A------ITEQFMNRLF-NEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-----RYKQIKR----TEGVSSTDIVGRILS 202 (420)
Q Consensus 139 ~------~~~~fl~~ll-~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-----~~~~v~r----~~~ISST~Ir~rI~~ 202 (420)
+ ..++|+++++ ++++++++|+|+||+||.++.++++.|++.+ ++..++. ...||||.||+.|.+
T Consensus 93 ~~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISST~IR~~I~~ 172 (305)
T PRK05627 93 DEEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGKKRAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSSTAIRQALAE 172 (305)
T ss_pred CHHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCCCCCCCHHHHHHHHHHcCcEEEEeccEecCCCcCchHHHHHHHHc
Confidence 3 1248998855 5699999999999999999999999988863 3455543 357999999999986
Q ss_pred c
Q 014671 203 S 203 (420)
Q Consensus 203 ~ 203 (420)
+
T Consensus 173 G 173 (305)
T PRK05627 173 G 173 (305)
T ss_pred C
Confidence 5
No 33
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.5e-19 Score=180.51 Aligned_cols=132 Identities=36% Similarity=0.507 Sum_probs=116.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhccccccEEEeCCCccccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~ 142 (420)
.+.|++.||||.+|.||..+|.||+++||.|+||++||.++.+.|| +||.+++.|+.++.++..||+|++ |++
T Consensus 332 ~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~L~~VD~vV~-----F~e 406 (467)
T COG2870 332 KKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDLVVI-----FDE 406 (467)
T ss_pred CeEEEecchhhhccccHHHHHHHHHhhCCeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhhcccceEEEE-----ecC
Confidence 3489999999999999999999999999999999999999988898 899999999999999999999998 466
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHh
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~ 202 (420)
|+-.++++.++||++|.|-||+... =.+.-.....+|++..++..++.|||.|+++|..
T Consensus 407 dTP~~LI~~~~PdilVKGgDy~~~~-i~g~~~v~~~GG~v~~i~f~~g~STt~ii~ki~~ 465 (467)
T COG2870 407 DTPEELIEAVKPDILVKGGDYKIEK-IVGADIVEAYGGEVLLIPFEEGKSTTKIIEKIRA 465 (467)
T ss_pred CCHHHHHHHhCcceEEccCCCChhh-ccchhhhhhcCCeEEEEecccCCcHHHHHHHHhc
Confidence 6777788899999999999996431 1233334567889999999999999999999975
No 34
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=99.80 E-value=1.3e-19 Score=163.74 Aligned_cols=131 Identities=26% Similarity=0.417 Sum_probs=90.6
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHhC---Ce--EEEEEecchhhhhc--CC-CCCCcHHHHHHHHhccccccEEEe
Q 014671 63 KKRVRVYMDGCFDLMHYGHANALRQAKALG---DE--LVVGVVSDEEIIAN--KG-PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg---d~--LiVgV~sd~~i~~~--K~-~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
...+.++++|+|||+|+||+.||++|.+.+ +. +++.+.++|..... +. ..+++.+||.++++.+ +||+++.
T Consensus 3 ~~~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~-Gvd~~~~ 81 (157)
T PF06574_consen 3 NNKKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESL-GVDYVIV 81 (157)
T ss_dssp T-S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHT-TESEEEE
T ss_pred CCCCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHc-CCCEEEE
Confidence 345689999999999999999999999997 32 34444444432222 22 5699999999999997 8999876
Q ss_pred CCCccc-----c-HHHHHHHHh-hcCccEEEEcCCCCCCCCCccHHHHHHhCCe-----EEEeccC----CCCChHH
Q 014671 135 NAPYAI-----T-EQFMNRLFN-EHKIDYIIHGDDPCLLPDGTDAYALAKKVGR-----YKQIKRT----EGVSSTD 195 (420)
Q Consensus 135 ~~p~~~-----~-~~fl~~ll~-~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~-----~~~v~r~----~~ISST~ 195 (420)
.||+- + ++|+++++. ++++..||+|+||+||+++.++.+.|++.++ +..++.. ..||||+
T Consensus 82 -~~F~~~~~~ls~~~Fi~~iL~~~l~~~~ivvG~DfrFG~~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISStr 157 (157)
T PF06574_consen 82 -IPFTEEFANLSPEDFIEKILKEKLNVKHIVVGEDFRFGKNRSGDVELLKELGKEYGFEVEVVPPVKIDGEKISSTR 157 (157)
T ss_dssp -E-CCCHHCCS-HHHHHHHHCCCHCTEEEEEEETT-EESGGGEEEHHHHHHCTTTT-SEEEEE---EETTEE-SHHH
T ss_pred -ecchHHHHcCCHHHHHHHHHHhcCCccEEEEccCccCCCCCCCCHHHHHHhcccCceEEEEECCEEcCCcEeCCCC
Confidence 33421 1 489999776 8999999999999999999999999999885 3444432 2499985
No 35
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=99.79 E-value=6.3e-19 Score=173.69 Aligned_cols=134 Identities=19% Similarity=0.282 Sum_probs=103.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhC-----CeEEEEEecchhhhhc--CCCCCCcHHHHHHHHhccccccEEEeCCCcc-
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALG-----DELVVGVVSDEEIIAN--KGPPVLSMEERLALVSGLKWVDEVIANAPYA- 139 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lg-----d~LiVgV~sd~~i~~~--K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~- 139 (420)
++++|+|||+|.||+.||++|++.+ ...++.+.++|..... +.+++++.+||.++++.+ +||.++. .||+
T Consensus 1 ~vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~~~~~l~~~~~k~~~l~~~-Gvd~~~~-~~F~~ 78 (288)
T TIGR00083 1 SLAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWLTAPALTPLEDKARQLQIK-GVEQLLV-VVFDE 78 (288)
T ss_pred CEEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCccCCCCCCCHHHHHHHHHHc-CCCEEEE-eCCCH
Confidence 5799999999999999999999875 2345555555442222 223499999999999997 8999988 4442
Q ss_pred ----cc-HHHHHHHHh-hcCccEEEEcCCCCCCCCCccHHHHHHhCCeE-----EEecc---CCCCChHHHHHHHHhc
Q 014671 140 ----IT-EQFMNRLFN-EHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY-----KQIKR---TEGVSSTDIVGRILSS 203 (420)
Q Consensus 140 ----~~-~~fl~~ll~-~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~-----~~v~r---~~~ISST~Ir~rI~~~ 203 (420)
++ ++|+++++. +++++.||+|+||+||.++.++++.|++.++. ..++. ...||||.||+.|.++
T Consensus 79 ~~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~~~G~~~~L~~~~~~~g~~v~~~~~~~~~~~ISST~IR~~l~~G 156 (288)
T TIGR00083 79 EFANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHDRQGDFLLLQLFGNTTIFCVIVKQLFCQDIRISSSAIRQALKNG 156 (288)
T ss_pred HHHcCCHHHHHHHHHHhccCCcEEEECCCccCCCCCCCCHHHHHHhccccCcEEEEeccccCCCeECHHHHHHHHHcC
Confidence 12 379988774 59999999999999999999999999998752 22222 2469999999999976
No 36
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=99.75 E-value=8.9e-18 Score=165.84 Aligned_cols=137 Identities=22% Similarity=0.321 Sum_probs=106.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCC-----eEEEEEecchhhhhcCC---CCCCcHHHHHHHHhccccccEEEeCC
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGD-----ELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANA 136 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd-----~LiVgV~sd~~i~~~K~---~pi~t~eER~~ll~~~~~VD~vi~~~ 136 (420)
...|+++|+|||+|+||+.+|++|++.+. .+++.+.+.|.....+. ..+++.++|.++++.+ +||.++. .
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~-gvd~~~v-~ 92 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGY-GVDALVV-L 92 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhc-CCcEEEE-E
Confidence 45799999999999999999999998762 23444444443222221 2399999999999998 8999987 3
Q ss_pred Ccc--cc----HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCe----EEEeccC--C--CCChHHHHHHHHh
Q 014671 137 PYA--IT----EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR----YKQIKRT--E--GVSSTDIVGRILS 202 (420)
Q Consensus 137 p~~--~~----~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~----~~~v~r~--~--~ISST~Ir~rI~~ 202 (420)
+|+ +. ++|++.+++.++++.+|+|+||+||.++.++.++|+..|+ +..++.. + .||||.||+.+..
T Consensus 93 ~F~~~fa~ls~~~Fv~~lv~~l~~k~ivvG~DF~FGk~~~g~~~~L~~~~~~gf~v~~v~~~~~~~~~iSSt~IR~~L~~ 172 (304)
T COG0196 93 DFDLEFANLSAEEFVELLVEKLNVKHIVVGFDFRFGKGRQGNAELLRELGQKGFEVTIVPKINEEGIRISSTAIRQALRE 172 (304)
T ss_pred eCCHhHhhCCHHHHHHHHHhccCCcEEEEecccccCCCCCCCHHHHHHhccCCceEEEeccEecCCcEEchHHHHHHHhc
Confidence 343 21 4899877789999999999999999999999999999885 4444432 3 4999999999885
Q ss_pred c
Q 014671 203 S 203 (420)
Q Consensus 203 ~ 203 (420)
+
T Consensus 173 g 173 (304)
T COG0196 173 G 173 (304)
T ss_pred C
Confidence 4
No 37
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain. Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.74 E-value=9.7e-18 Score=146.68 Aligned_cols=131 Identities=19% Similarity=0.244 Sum_probs=99.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccc-ccEEEe-CCCc---cc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW-VDEVIA-NAPY---AI 140 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~-VD~vi~-~~p~---~~ 140 (420)
+++++|+||++|.||+.++++|++++ +.++|++.+++.... +..++++.++|+++++.+.. ++.++. ..+. ..
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~R~~~l~~~~~~~~~v~~~~~~~~~~~~ 79 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKK-RNKDPFSLHERVEMLKEILKDRLKVVPVDFPEVKILL 79 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhc-ccccCCCHHHHHHHHHHhccCCcEEEEEecChhhccC
Confidence 37899999999999999999999999 999999988875432 13579999999999999863 666654 2111 11
Q ss_pred cHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHh---CCeEEEeccC---CCCChHHHHHH
Q 014671 141 TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK---VGRYKQIKRT---EGVSSTDIVGR 199 (420)
Q Consensus 141 ~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~---~g~~~~v~r~---~~ISST~Ir~r 199 (420)
+.+|+..++..++++++++|.|+.++.++++. +.++. ..+++.+++. ..||||.||++
T Consensus 80 ~~~~~~~~~~~~~~~~~v~G~d~~~~~~~~~~-~~~~~~~~~~~vv~~~~~~~~~~iSSt~IR~~ 143 (143)
T cd02039 80 AVVFILKILLKVGPDKVVVGEDFAFGKNASYN-KDLKELFLDIEIVEVPRVRDGKKISSTLIREL 143 (143)
T ss_pred HHHHHHHHHHHcCCcEEEECCccccCCchhhh-HHHHHhCCceEEEeeEecCCCcEEehHHhhcC
Confidence 22466666677999999999999999887764 33333 2356666776 46999999974
No 38
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Probab=99.71 E-value=1.9e-17 Score=149.02 Aligned_cols=132 Identities=26% Similarity=0.335 Sum_probs=94.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccH---
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE--- 142 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~--- 142 (420)
++|+++|+||++|.||..+|++|++++|+|+|||++|+.+.++|..|+++.++|++|++. +++.+.+...+.+.+
T Consensus 2 ~~v~~gGtFDplH~GH~~ll~~A~~~~d~livgi~~d~~~~~~K~~~i~~~e~R~~~v~~--~~~~~~~~~~~~i~~i~d 79 (153)
T PRK00777 2 MKVAVGGTFDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKKHKVRPYEVRLKNLKK--FLKAVEYDREYEIVKIDD 79 (153)
T ss_pred cEEEEecccCCCCHHHHHHHHHHHHcCCEEEEEEcCCccccccCCCCCCCHHHHHHHHHH--HHHhcCCCCcEEEEeccc
Confidence 479999999999999999999999999999999999987766666799999999999995 566554433332211
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC----eEEEecc-----CCCCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR-----TEGVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r-----~~~ISST~Ir~rI~~~ 203 (420)
.|.... ..++|++|+|+|-..+ +...-+..++.| ++..++. ...+|||.||+++.+.
T Consensus 80 ~~gp~~--~~~~d~ivvs~et~~~--~~~in~~r~~~gl~~l~i~~v~~~~~~~~~~~SSt~Ir~~~~~~ 145 (153)
T PRK00777 80 PYGPAL--EDDFDAIVVSPETYPG--ALKINEIRRERGLKPLEIVVIDFVLAEDGKPISSTRIRRGEIDE 145 (153)
T ss_pred cCCCcc--ccCCCEEEEChhhhhh--HHHHHHHHHHCCCCceEEEEEeeeecCCCCeeeHHHHHHhhhcc
Confidence 121111 2369999999994332 222223344444 2445554 4569999999988754
No 39
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Probab=99.68 E-value=2.2e-16 Score=142.20 Aligned_cols=129 Identities=22% Similarity=0.346 Sum_probs=91.3
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhc----cccceEEEc---CCC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLAC----RYVDEVIIG---APW 328 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~----~~VD~Vvi~---~~~ 328 (420)
+.|++.|+||++|.||+.+|++|+.+||+|+|||++|+.+.. ++.|+++.++|+++++.+ ...+.+.+. +++
T Consensus 2 ~~v~~gGtFDplH~GH~~ll~~A~~~~d~livgi~~d~~~~~~K~~~i~~~e~R~~~v~~~~~~~~~~~~~~i~~i~d~~ 81 (153)
T PRK00777 2 MKVAVGGTFDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKKHKVRPYEVRLKNLKKFLKAVEYDREYEIVKIDDPY 81 (153)
T ss_pred cEEEEecccCCCCHHHHHHHHHHHHcCCEEEEEEcCCccccccCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccccC
Confidence 469999999999999999999999999999999999998865 446999999999999853 222333321 233
Q ss_pred CchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe----EEEeCC-----CCCCCHHHHHHHHHhchH
Q 014671 329 EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLLES-----PKSITTTSVAQRIIANHE 394 (420)
Q Consensus 329 ~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~~~~-----~~~~Stt~Ii~RI~~~~~ 394 (420)
..+ + ..++|++|.|+|...+ ........++.|. ...++. +..+|||.|++++.+.+.
T Consensus 82 gp~---~-~~~~d~ivvs~et~~~-----~~~in~~r~~~gl~~l~i~~v~~~~~~~~~~~SSt~Ir~~~~~~~~ 147 (153)
T PRK00777 82 GPA---L-EDDFDAIVVSPETYPG-----ALKINEIRRERGLKPLEIVVIDFVLAEDGKPISSTRIRRGEIDEHG 147 (153)
T ss_pred CCc---c-ccCCCEEEEChhhhhh-----HHHHHHHHHHCCCCceEEEEEeeeecCCCCeeeHHHHHHhhhcccc
Confidence 222 2 2369999999873221 1112233444552 234443 567999999999887654
No 40
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.64 E-value=9.9e-16 Score=138.75 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=97.9
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+|||+|.||+.++++|++++|.|+|+++.+. .+.|+++.++|+++++. ++.+|.|.+......+.+.
T Consensus 1 ~~igi~gGsFdP~H~GHl~~~~~a~~~~d~v~v~~~~~~----~k~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t~~~ 76 (159)
T PRK00168 1 MKIAIYPGSFDPITNGHLDIIERASRLFDEVIVAVAINP----SKKPLFSLEERVELIREATAHLPNVEVVSFDGLLVDF 76 (159)
T ss_pred CcEEEEeeecCCCCHHHHHHHHHHHHHCCEEEEEECCCC----CCCCCCCHHHHHHHHHHHHcCCCCEEEecCCccHHHH
Confidence 368999999999999999999999999999999998875 34689999999999988 8999999987766678999
Q ss_pred HhhcCccEEEEcCC-cCCCCCCCCCCChHHHHHhC----CeEEEeCCC--CCCCHHHHHHHHHhch
Q 014671 335 ITTFNICLVVHGTV-SETNTPLTGQSDPYEVAKSM----GIFQLLESP--KSITTTSVAQRIIANH 393 (420)
Q Consensus 335 i~~~~~d~vv~G~d-~~~~~~~~~~~d~~~~~k~~----G~~~~~~~~--~~~Stt~Ii~RI~~~~ 393 (420)
++.++++++++|-+ |.. +.. ..+.....+.+ +.+..+..+ .++|||.|.+||..+.
T Consensus 77 ~~~~~~~~~~~gl~~w~d--~e~-~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~i~~g~ 139 (159)
T PRK00168 77 AREVGATVIVRGLRAVSD--FEY-EFQMAGMNRKLAPEIETVFLMPSPEYSFISSSLVKEVARLGG 139 (159)
T ss_pred HHHcCCCEEEecCcchhh--HHH-HHHHHHhCCCCCCCCcEEEEeCCCCcceecHHHHHHHHHcCC
Confidence 99999999999943 211 100 00000111122 223233333 3699999999997654
No 41
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.58 E-value=1.3e-14 Score=131.51 Aligned_cols=127 Identities=20% Similarity=0.249 Sum_probs=87.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCccccHHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~~~f 144 (420)
++++++|+||++|.||+.++++|++.+|+|+|++.+++ .| .++++.++|++|++. ++.++.+.+..--+++.++
T Consensus 2 ~igi~gGsFdP~H~GHl~~~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t~~~ 76 (159)
T PRK00168 2 KIAIYPGSFDPITNGHLDIIERASRLFDEVIVAVAINP----SK-KPLFSLEERVELIREATAHLPNVEVVSFDGLLVDF 76 (159)
T ss_pred cEEEEeeecCCCCHHHHHHHHHHHHHCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEEecCCccHHHH
Confidence 57999999999999999999999999999999987764 24 579999999999987 8888887664212233444
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHH--HHh-C----CeEEEeccC--CCCChHHHHHHHHhc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYAL--AKK-V----GRYKQIKRT--EGVSSTDIVGRILSS 203 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~--lk~-~----g~~~~v~r~--~~ISST~Ir~rI~~~ 203 (420)
+ +++++++++.|-|-.. +....... +.+ . ..+..+... ..||||.||+++..+
T Consensus 77 ~----~~~~~~~~~~gl~~w~--d~e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~i~~g 138 (159)
T PRK00168 77 A----REVGATVIVRGLRAVS--DFEYEFQMAGMNRKLAPEIETVFLMPSPEYSFISSSLVKEVARLG 138 (159)
T ss_pred H----HHcCCCEEEecCcchh--hHHHHHHHHHhCCCCCCCCcEEEEeCCCCcceecHHHHHHHHHcC
Confidence 4 5678999999954211 11111111 111 1 112222222 259999999999854
No 42
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Probab=99.58 E-value=5.5e-15 Score=147.05 Aligned_cols=126 Identities=19% Similarity=0.316 Sum_probs=93.6
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhc--cccceEEEc---CCCCch
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLAC--RYVDEVIIG---APWEVT 331 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~--~~VD~Vvi~---~~~~~~ 331 (420)
+|++.||||+||.||+.+|++|+++||+|||||++|+.+++ ++.| .|+++|+++|+++ ++++.+.+. +|+..
T Consensus 2 ~V~vgGTFD~lH~GH~~lL~~A~~~gd~LiVgvt~D~~~~~~k~~~-~~~e~R~~~v~~fl~~~~~~~~i~~i~D~~Gp- 79 (322)
T PRK01170 2 ITVVGGTFSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKVYP-IPYEDRKRKLENFIKKFTNKFRIRPIDDRYGN- 79 (322)
T ss_pred EEEEccccccCChHHHHHHHHHHHcCCEEEEEEccHHHHHhcCCCC-CCHHHHHHHHHHHHHhcCCcEEEEecCCCCCC-
Confidence 69999999999999999999999999999999999999987 4448 9999999999995 777765553 34433
Q ss_pred HHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe----EEEeC-----CCCCCCHHHHHHHHHhc
Q 014671 332 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLLE-----SPKSITTTSVAQRIIAN 392 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~~~-----~~~~~Stt~Ii~RI~~~ 392 (420)
.+...+||++|.+++...+ +.......++.|. ++.++ ....+|||.|++.-+..
T Consensus 80 --t~~~~~~d~IVVS~ET~~~-----~~~IN~~R~e~Gl~pleIv~I~~v~~~d~~~iSSTrIr~~eid~ 142 (322)
T PRK01170 80 --TLYEEDYEIIVVSPETYQR-----ALKINEIRIKNGLPPLKIVRVPYVLAEDLFPISSTRIINGEIDG 142 (322)
T ss_pred --CcccCCCCEEEEecccccc-----HHHHHHHHHHCCCCceEEEEEEeEEcCCCCcccHHHHhhhhccc
Confidence 3456789999999875332 2222334455563 22332 12347999999965554
No 43
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=99.56 E-value=4.3e-14 Score=128.76 Aligned_cols=125 Identities=23% Similarity=0.343 Sum_probs=85.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHH-hcccccc-E---EEeCCCcccc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALV-SGLKWVD-E---VIANAPYAIT 141 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll-~~~~~VD-~---vi~~~p~~~~ 141 (420)
|++++|+||++|.||++++++|++.+|+|++++.++.. ..|..+.++.+||++|+ ++++.++ . +++.......
T Consensus 1 rgl~~G~FdP~H~GHl~ii~~a~~~~D~lii~i~s~~~--~~k~~~p~~~~eR~~mi~~al~~~~~~~~~~vP~~d~~~~ 78 (165)
T TIGR01527 1 RGFYIGRFQPFHLGHLEVIKKIAEEVDELIIGIGSAQE--SHTLENPFTAGERILMITQSLKEVGDLTYYIIPIEDIERN 78 (165)
T ss_pred CeEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCCC--CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEEecCCccHH
Confidence 47899999999999999999999999999999988764 23444555679999999 4556553 3 2221111111
Q ss_pred HHHHHHHHhh--cCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEec---cCCCCChHHHHHHHHhc
Q 014671 142 EQFMNRLFNE--HKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK---RTEGVSSTDIVGRILSS 203 (420)
Q Consensus 142 ~~fl~~ll~~--~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~---r~~~ISST~Ir~rI~~~ 203 (420)
..+.. .+.. -++|+|+.|+.. ....+++.| ++..++ |+ ++|||+||++|.++
T Consensus 79 ~~w~~-~v~~~~p~~D~vf~~~~~--------~~~~f~e~g~~v~~~p~~~r~-~~S~T~IR~~i~~~ 136 (165)
T TIGR01527 79 SIWVS-YVESMTPPFDVVYSNNPL--------VRRLFKEAGYEVKRPPMFNRK-EYSGTEIRRRMLNG 136 (165)
T ss_pred HHHHH-HHHHhCCCCCEEEECCHH--------HHHHHHHcCCEEEECCCcCCC-cccHHHHHHHHHcC
Confidence 11211 1111 178999999432 245666666 445555 54 89999999999864
No 44
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Probab=99.56 E-value=1.4e-14 Score=128.53 Aligned_cols=89 Identities=22% Similarity=0.347 Sum_probs=80.9
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
+++++++|+|||+|.||++++++|.+++|.|+|+|..++ +|+|.++++||.++++. .+..++|-+....++..++
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~Fd~viVaV~~np----~K~plFsleER~~l~~~~~~~l~nV~V~~f~~Llvd~ 77 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALFDEVIVAVAINP----SKKPLFSLEERVELIREATKHLPNVEVVGFSGLLVDY 77 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhccEEEEEEEeCC----CcCCCcCHHHHHHHHHHHhcCCCceEEEecccHHHHH
Confidence 589999999999999999999999999999999999998 77899999999988865 4777888887777789999
Q ss_pred HhhcCccEEEEcCC
Q 014671 335 ITTFNICLVVHGTV 348 (420)
Q Consensus 335 i~~~~~d~vv~G~d 348 (420)
.++.++.++|||=.
T Consensus 78 ak~~~a~~ivRGLR 91 (159)
T COG0669 78 AKKLGATVLVRGLR 91 (159)
T ss_pred HHHcCCCEEEEecc
Confidence 99999999999953
No 45
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=99.55 E-value=4.4e-14 Score=130.72 Aligned_cols=125 Identities=22% Similarity=0.211 Sum_probs=92.9
Q ss_pred cccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-ccccEE---------Ee--CCCcc
Q 014671 72 GCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEV---------IA--NAPYA 139 (420)
Q Consensus 72 G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD~v---------i~--~~p~~ 139 (420)
-.|||+|+||..++++|.+.++.+.|.+.+. + .+.++.++|++|++.. +....+ +. ..|--
T Consensus 6 ~~~DPiH~GHl~i~~~a~~~~d~~~V~v~p~------~-~~~~s~e~R~~Mi~~a~~~~~~v~v~~~~~~~v~~~~~~~~ 78 (182)
T smart00764 6 MNANPFTLGHRYLVEQAAAECDWVHLFVVSE------D-ASLFSFDERFALVKKGTKDLDNVTVHSGSDYIISRATFPSY 78 (182)
T ss_pred ECCCCCCHHHHHHHHHHHHHCCceEEEEEeC------C-CCCCCHHHHHHHHHHHhccCCCEEEEecCCceeccccChhh
Confidence 3799999999999999999999888777653 2 3577999999999852 222211 11 11111
Q ss_pred c---------------cHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC----eEEEecc----CCCCChHHH
Q 014671 140 I---------------TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR----TEGVSSTDI 196 (420)
Q Consensus 140 ~---------------~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r----~~~ISST~I 196 (420)
+ .++|++.+.+++++..|++|+||+||.++.|+.+.|++.+ ++..+++ .+.+|||.|
T Consensus 79 ~~~~~~~~~~~~a~lsa~~Fi~~L~~~l~~~~ivvG~df~FG~~~~G~~~~L~~~~~~g~~v~~I~r~~~~g~~iSST~I 158 (182)
T smart00764 79 FLKEQDVVIKSQTTLDLRIFRKYIAPALGITHRYVGEEPFSPVTAIYNQTMKQTLLSPAIEVVEIERKKANGQPISASTV 158 (182)
T ss_pred hcCchhHHHHHHhcCCHHHHHHHHHHHcCceEEEEcCCCCCCCCCccCHHHHHHHhhCCCEEEEEecccCCCcEECHHHH
Confidence 1 1378875556799999999999999999999999988763 3456665 234999999
Q ss_pred HHHHHhc
Q 014671 197 VGRILSS 203 (420)
Q Consensus 197 r~rI~~~ 203 (420)
|+.|.++
T Consensus 159 R~~L~~G 165 (182)
T smart00764 159 RKLLKEG 165 (182)
T ss_pred HHHHHcC
Confidence 9999754
No 46
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT). Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
Probab=99.55 E-value=4.4e-15 Score=130.93 Aligned_cols=126 Identities=29% Similarity=0.424 Sum_probs=92.2
Q ss_pred EEcCccccCCHHHHHHHHHHHhcCCE-EEEEEecCccccCCCCCCCCHHHHHHhhhhccccce-----------------
Q 014671 260 YIDGAFDLFHAGHVEILKKARQLGDF-LLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDE----------------- 321 (420)
Q Consensus 260 ~~~G~FDl~H~GHi~~L~~Ak~~gd~-LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~----------------- 321 (420)
++.|+|||+|.||+.+|++|++++|. ++|+|.+|....+.++++++.++|+.+++.+..++.
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k~~~~~~~~~~R~~ml~~~~~~~~~i~v~~~e~~~~~~~~~ 80 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHKDKKPIFSFEERLEMLRAAFKDDPNIEVDDWELEQDKKKYP 80 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHSTTSSSSTHHHHHHHHHHHHTTCTTEEEEEEHHHSSHHHST
T ss_pred CeeeEcCcccHHHHHHHHHHHHhccccccccccccccccccccccCcHHHHHHHHHHHHhhcCCccccchhHHhHhhhcc
Confidence 57899999999999999999999997 788899888776544499999999999999887777
Q ss_pred -----EEEcCC-------CCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCC-eEEEeCCCCCCCHHHHHHH
Q 014671 322 -----VIIGAP-------WEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLESPKSITTTSVAQR 388 (420)
Q Consensus 322 -----Vvi~~~-------~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~~~~~~~~Stt~Ii~R 388 (420)
++++++ |....++++.+++.++.++.++..... ..+.+......+ .+........+|||+|.+|
T Consensus 81 ~~~~~~v~g~D~~~~~~~~~~~~~~~~~~~~~v~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~iSST~IR~~ 157 (157)
T PF01467_consen 81 DVKIYFVIGADNLRNFPKWRDWQEILKEVNIIVVSRGGDDPIETI---SDDEILEKYPLGIIFILDPPRNEISSTEIRER 157 (157)
T ss_dssp SSCEEEEEECTHHEEEEESTTHHHHHHHHHEEEEEHHHTTTHEEE---EHCHHHHHTTCEEEEEEEGGGTTSSHHHHHHH
T ss_pred ccccceeccCCceeeecCCCcHHHHHHhCCEEEEEcCCCCccchh---hhccccccccceeEEEecCCCCccCHHHHhcC
Confidence 888888 777788999999999999865433211 111222222233 3334455567999999987
No 47
>cd02163 PPAT Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
Probab=99.52 E-value=6.9e-14 Score=125.93 Aligned_cols=125 Identities=21% Similarity=0.265 Sum_probs=85.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCccccHHHHH
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQFMN 146 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~~~fl~ 146 (420)
++++|+||++|.||..++++|.+.+|++++++++++ .| .++++.++|++|++. ++.++.+.+..-.+++.+++
T Consensus 2 ~i~gGsFdP~H~GHl~l~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~~~v~~~es~t~~~l- 75 (153)
T cd02163 2 AVYPGSFDPITNGHLDIIERASKLFDEVIVAVAVNP----SK-KPLFSLEERVELIREATKHLPNVEVDGFDGLLVDFA- 75 (153)
T ss_pred EEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEecCCcchHHHHH-
Confidence 689999999999999999999999999999998764 24 478999999999986 67777776532112344544
Q ss_pred HHHhhcCccEEEEcCCCCCCCCCccHHHH--HHhCC----eEEEeccCC---CCChHHHHHHHHhc
Q 014671 147 RLFNEHKIDYIIHGDDPCLLPDGTDAYAL--AKKVG----RYKQIKRTE---GVSSTDIVGRILSS 203 (420)
Q Consensus 147 ~ll~~~~~d~vV~G~D~~~g~~g~~~~~~--lk~~g----~~~~v~r~~---~ISST~Ir~rI~~~ 203 (420)
+.++.+++++|-|-.... ...... +.+.+ ....+..++ .+|||.||+++..+
T Consensus 76 ---~~l~~~~~i~G~d~~~~~--e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~~~~g 136 (153)
T cd02163 76 ---RKHGANVIVRGLRAVSDF--EYEFQMAGMNRKLAPEIETVFLMASPEYSFISSSLVKEIARFG 136 (153)
T ss_pred ---HHcCCCEEEECCcchhhH--HHHHHHHHhCCCCCCCCcEEEEeCCCccceecHHHHHHHHHcC
Confidence 567899999995521111 111111 11111 112222332 49999999999965
No 48
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.52 E-value=6.8e-14 Score=138.69 Aligned_cols=130 Identities=18% Similarity=0.194 Sum_probs=96.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-cc---------ccEEEe
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KW---------VDEVIA 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~---------VD~vi~ 134 (420)
.+++-+.|+|||+|.||..++++|.+.+|.++|.+.+. + ++.++.++|++|++.. +. -|.++.
T Consensus 114 ~~~~~~~~~FDPiH~GHl~ii~~a~~~~d~~~V~i~~~------~-~~~~~~e~R~~ml~~ai~~~~~v~v~~~~~l~v~ 186 (297)
T cd02169 114 KKIAAIVMNANPFTLGHRYLVEKAAAENDWVHLFVVSE------D-KSLFSFADRFKLVKKGTKHLKNVTVHSGGDYIIS 186 (297)
T ss_pred CceEEEEecCCCCchHHHHHHHHHHhhCCeEEEEEEcC------C-CCCCCHHHHHHHHHHHhCCCCCEEEEecCCeeec
Confidence 46889999999999999999999999999888877552 2 5788999999999841 11 122222
Q ss_pred CCCcc----------------cc-HHHHHHHH-hhcCccEEEEcCCCCCCCCCccHHHHHHhCCe-----EEEecc----
Q 014671 135 NAPYA----------------IT-EQFMNRLF-NEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR-----YKQIKR---- 187 (420)
Q Consensus 135 ~~p~~----------------~~-~~fl~~ll-~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~-----~~~v~r---- 187 (420)
...|. ++ ++|++ ++ +++++..||+|+||+||.++.++..+++. |+ +..++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~a~lsa~~Fi~-iL~~~l~~~~ivvG~Df~FG~~r~G~~~l~~~-~~~~gf~v~~v~~~~~~ 264 (297)
T cd02169 187 SATFPSYFIKEQDVVIKAQTALDARIFRK-YIAPALNITKRYVGEEPFSRVTAIYNQTMQEE-LLSPAIEVIEIERKKYD 264 (297)
T ss_pred cccChhhhcCChhHHHHHHhcCCHHHHHH-HHHHHcCCcEEEEcCCCCCCCcchhHHHHHHh-cccCCCEEEEecccccC
Confidence 21110 00 27887 66 56999999999999999999999555555 43 344443
Q ss_pred CCCCChHHHHHHHHhc
Q 014671 188 TEGVSSTDIVGRILSS 203 (420)
Q Consensus 188 ~~~ISST~Ir~rI~~~ 203 (420)
...||||.||+.|.++
T Consensus 265 g~~ISST~IR~~l~~G 280 (297)
T cd02169 265 GQPISASTVRQLLKEG 280 (297)
T ss_pred CcEEcHHHHHHHHHcC
Confidence 2359999999999876
No 49
>cd02163 PPAT Phosphopantetheine adenylyltransferase. Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
Probab=99.52 E-value=7.8e-14 Score=125.58 Aligned_cols=129 Identities=19% Similarity=0.239 Sum_probs=95.4
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHHHh
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDMIT 336 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~i~ 336 (420)
++++.|+|||+|.||+.++++|++.+|.|+|+++++. .+.|.++.++|+.|++. ++.++.+.+..-...+.+.++
T Consensus 1 i~i~gGsFdP~H~GHl~l~~~a~~~~d~v~v~~~~~~----~k~~~~~~~~R~~ml~~a~~~~~~~~v~~~es~t~~~l~ 76 (153)
T cd02163 1 IAVYPGSFDPITNGHLDIIERASKLFDEVIVAVAVNP----SKKPLFSLEERVELIREATKHLPNVEVDGFDGLLVDFAR 76 (153)
T ss_pred CEEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCHHHHHHHHHHHHcCCCCEEecCCcchHHHHHH
Confidence 4689999999999999999999999999999998775 34589999999999976 799999988765557889999
Q ss_pred hcCccEEEEcCCcCCCCCCCCCCChHHHHHhC-----CeEEEeCCCC--CCCHHHHHHHHHhch
Q 014671 337 TFNICLVVHGTVSETNTPLTGQSDPYEVAKSM-----GIFQLLESPK--SITTTSVAQRIIANH 393 (420)
Q Consensus 337 ~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~-----G~~~~~~~~~--~~Stt~Ii~RI~~~~ 393 (420)
.++.+++++|.|.-.+ + +.........+. ..+..+..+. ++|||.|.+|+..+.
T Consensus 77 ~l~~~~~i~G~d~~~~-~--e~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~~~~g~ 137 (153)
T cd02163 77 KHGANVIVRGLRAVSD-F--EYEFQMAGMNRKLAPEIETVFLMASPEYSFISSSLVKEIARFGG 137 (153)
T ss_pred HcCCCEEEECCcchhh-H--HHHHHHHHhCCCCCCCCcEEEEeCCCccceecHHHHHHHHHcCC
Confidence 9999999999542111 1 000011111111 1233333332 599999999998754
No 50
>PLN02388 phosphopantetheine adenylyltransferase
Probab=99.51 E-value=1.4e-14 Score=132.78 Aligned_cols=138 Identities=18% Similarity=0.198 Sum_probs=92.0
Q ss_pred CCCCceEEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhccc----c---ccE
Q 014671 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLK----W---VDE 131 (420)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~~~----~---VD~ 131 (420)
.......|+++|+||++|.||+.||++|.++| +.++||+++|+.....+. ..+.+.++|.+.++..- . ++.
T Consensus 15 ~~~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~~fl~~~~p~~~~~i 94 (177)
T PLN02388 15 PPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVEEYIKSIKPELVVQA 94 (177)
T ss_pred CCCcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHHHHHHHcCCCceEEE
Confidence 33446789999999999999999999999998 479999999997533222 56999999999998621 1 122
Q ss_pred EEeCCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCe--EEEec---c---CCCCChHHHHHHHHhc
Q 014671 132 VIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIK---R---TEGVSSTDIVGRILSS 203 (420)
Q Consensus 132 vi~~~p~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~--~~~v~---r---~~~ISST~Ir~rI~~~ 203 (420)
+-+..||..+. ..-++|++|++..-..|...-..+...+.... +..++ . ...||||.||+|+.+.
T Consensus 95 ~~i~D~~Gpt~-------~~~~~d~LVVS~ET~~g~~~IN~~R~e~Gl~pL~i~~v~~v~~~~~~~kiSST~iR~~~~~~ 167 (177)
T PLN02388 95 EPIIDPYGPSI-------VDENLEAIVVSKETLPGGLSVNKKRAERGLSQLKIEVVDIVPEESTGNKLSSTTLRRLEAEK 167 (177)
T ss_pred EEecCCCCCcc-------cCCCCCEEEEcHhHhhhHHHHHHHHHHCCCCCeEEEEEEeEecCCCCCccCHHHHHHHHHHH
Confidence 22345554331 12368999999886665433333322221112 22222 1 2369999999999876
Q ss_pred cc
Q 014671 204 ME 205 (420)
Q Consensus 204 ~~ 205 (420)
.+
T Consensus 168 ~~ 169 (177)
T PLN02388 168 AV 169 (177)
T ss_pred HH
Confidence 54
No 51
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain. Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.49 E-value=1.2e-13 Score=120.81 Aligned_cols=129 Identities=19% Similarity=0.125 Sum_probs=91.2
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcC-CEEEEEEecCccccCCCCCCCCHHHHHHhhhhccc-cceEEEcCCCCc-----
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRY-VDEVIIGAPWEV----- 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~g-d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~-VD~Vvi~~~~~~----- 330 (420)
++++.|+||++|.||..+|++|++++ |.++|++.+|......+.++++.++|+.+++++.. +|.|++......
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~~v~~~~~~~~~~~~~ 80 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKKRNKDPFSLHERVEMLKEILKDRLKVVPVDFPEVKILLA 80 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhcccccCCCHHHHHHHHHHhccCCcEEEEEecChhhccCH
Confidence 57899999999999999999999999 99999999986443222489999999999999985 777777432211
Q ss_pred ---hHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCC-eEEEeCCC---CCCCHHHHHHH
Q 014671 331 ---TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLESP---KSITTTSVAQR 388 (420)
Q Consensus 331 ---~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~~~~~---~~~Stt~Ii~R 388 (420)
....+..+++++++.|.|+..+- ..++. ........+ .++.+++. ..+|||.|.+|
T Consensus 81 ~~~~~~~~~~~~~~~~v~G~d~~~~~-~~~~~-~~~~~~~~~~~vv~~~~~~~~~~iSSt~IR~~ 143 (143)
T cd02039 81 VVFILKILLKVGPDKVVVGEDFAFGK-NASYN-KDLKELFLDIEIVEVPRVRDGKKISSTLIREL 143 (143)
T ss_pred HHHHHHHHHHcCCcEEEECCccccCC-chhhh-HHHHHhCCceEEEeeEecCCCcEEehHHhhcC
Confidence 12356678999999999976652 12221 111111233 23344444 56999999764
No 52
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal. This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=99.48 E-value=4.2e-13 Score=122.09 Aligned_cols=126 Identities=21% Similarity=0.264 Sum_probs=85.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHh-cccccc------EEEeCCCcc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVD------EVIANAPYA 139 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD------~vi~~~p~~ 139 (420)
+++++|+||++|.||+.++++|.+.+|+|+|++.++... .+....++.+||++|++ ++..+| .+++...+.
T Consensus 1 ~~v~~G~FdP~H~GHl~~i~~a~~~~d~l~v~v~s~~~~--~~~~~~~~~~~R~~mi~~~~~~~~~~~~~v~v~~~~d~~ 78 (163)
T cd02166 1 RALFIGRFQPFHLGHLKVIKWILEEVDELIIGIGSAQES--HTLENPFTAGERVLMIRRALEEEGIDLSRYYIIPVPDIE 78 (163)
T ss_pred CeEEeeccCCCCHHHHHHHHHHHHHCCEEEEEecCCCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCcCeEEEEecCCCC
Confidence 378999999999999999999999999999998776532 22345578899999999 455554 333322122
Q ss_pred ccHHHHHHHHhhc-CccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEeccC--CCCChHHHHHHHHh
Q 014671 140 ITEQFMNRLFNEH-KIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRT--EGVSSTDIVGRILS 202 (420)
Q Consensus 140 ~~~~fl~~ll~~~-~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~--~~ISST~Ir~rI~~ 202 (420)
..+.+...+.... ++|+++.|++|.. ..+++.| .+..++++ .++|+|.||++|.+
T Consensus 79 ~~~~w~~~v~~~vp~~div~~g~~~~~--------~~f~~~g~~v~~~p~~~~~~~s~t~iR~~~~~ 137 (163)
T cd02166 79 RNSLWVSYVESLTPPFDVVYSGNPLVA--------RLFKEAGYEVRRPPMFNREEYSGTEIRRLMLG 137 (163)
T ss_pred chHHHHHHHHHHCCCCCEEEECchHHH--------HhhhhcCCeEecCCcccCCCCCHHHHHHHHHc
Confidence 3334443332222 4789999965321 2334444 44566764 47999999999874
No 53
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Probab=99.48 E-value=8.7e-14 Score=138.53 Aligned_cols=125 Identities=25% Similarity=0.379 Sum_probs=89.4
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc--ccccEEEe---CCCcccc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KWVDEVIA---NAPYAIT 141 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~--~~VD~vi~---~~p~~~~ 141 (420)
+|++.|+||.+|.||..+|++|+++||.|+|||++|+.+.++|..| .++++|+++|+++ +.++.+.. ..||..+
T Consensus 2 ~V~vgGTFD~lH~GH~~lL~~A~~~gd~LiVgvt~D~~~~~~k~~~-~~~e~R~~~v~~fl~~~~~~~~i~~i~D~~Gpt 80 (322)
T PRK01170 2 ITVVGGTFSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKVYP-IPYEDRKRKLENFIKKFTNKFRIRPIDDRYGNT 80 (322)
T ss_pred EEEEccccccCChHHHHHHHHHHHcCCEEEEEEccHHHHHhcCCCC-CCHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC
Confidence 6999999999999999999999999999999999999887666667 9999999999984 45554322 3344322
Q ss_pred HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC----eEEEecc---CC--CCChHHHHHHHH
Q 014671 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR---TE--GVSSTDIVGRIL 201 (420)
Q Consensus 142 ~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r---~~--~ISST~Ir~rI~ 201 (420)
. ...++|++|+|.+-..+. ...-+..++.| +++.++. .+ .+|||.||+.-.
T Consensus 81 ~-------~~~~~d~IVVS~ET~~~~--~~IN~~R~e~Gl~pleIv~I~~v~~~d~~~iSSTrIr~~ei 140 (322)
T PRK01170 81 L-------YEEDYEIIVVSPETYQRA--LKINEIRIKNGLPPLKIVRVPYVLAEDLFPISSTRIINGEI 140 (322)
T ss_pred c-------ccCCCCEEEEeccccccH--HHHHHHHHHCCCCceEEEEEEeEEcCCCCcccHHHHhhhhc
Confidence 1 235799999999965542 22222333444 2333332 22 389999998644
No 54
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
Probab=99.46 E-value=1.1e-13 Score=106.23 Aligned_cols=64 Identities=42% Similarity=0.662 Sum_probs=58.4
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccce
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDE 321 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~ 321 (420)
++++.|+||++|.||+.+|++|++++|.++|+|.+|+..+. ++.|+++.++|..++++|.++|.
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~~~~vv~i~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 65 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKGEPVFSLEERLEMLKALKYVDE 65 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECchHhccccCCCCCCCHHHHHHHHHHhccccC
Confidence 58999999999999999999999999999999999888776 33499999999999999998874
No 55
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT). Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
Probab=99.46 E-value=9.3e-14 Score=122.45 Aligned_cols=130 Identities=28% Similarity=0.327 Sum_probs=75.9
Q ss_pred EEecccCcCCHHHHHHHHHHHHhCCe-EEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccE----------------
Q 014671 69 YMDGCFDLMHYGHANALRQAKALGDE-LVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE---------------- 131 (420)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~lgd~-LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~---------------- 131 (420)
+++|+||++|.||+.+|++|++.++. +++++.++....+. ++++++.++|++|++.+...+.
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k~-~~~~~~~~~R~~ml~~~~~~~~~i~v~~~e~~~~~~~~ 79 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHKD-KKPIFSFEERLEMLRAAFKDDPNIEVDDWELEQDKKKY 79 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHST-TSSSSTHHHHHHHHHHHHTTCTTEEEEEEHHHSSHHHS
T ss_pred CeeeEcCcccHHHHHHHHHHHHhcccccccccccccccccc-ccccCcHHHHHHHHHHHHhhcCCccccchhHHhHhhhc
Confidence 57999999999999999999999986 57777777754322 2489999999999998666655
Q ss_pred ------EEeCCCc--ccc-HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEeccCCCCChHHHHHH
Q 014671 132 ------VIANAPY--AIT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTEGVSSTDIVGR 199 (420)
Q Consensus 132 ------vi~~~p~--~~~-~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~~~ISST~Ir~r 199 (420)
++.+.+. .+. .....+++..+++.++..+.+..........+......+ .+........||||+||+|
T Consensus 80 ~~~~~~~v~g~D~~~~~~~~~~~~~~~~~~~~~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iSST~IR~~ 157 (157)
T PF01467_consen 80 PDVKIYFVIGADNLRNFPKWRDWQEILKEVNIIVVSRGGDDPIETISDDEILEKYPLGIIFILDPPRNEISSTEIRER 157 (157)
T ss_dssp TSSCEEEEEECTHHEEEEESTTHHHHHHHHHEEEEEHHHTTTHEEEEHCHHHHHTTCEEEEEEEGGGTTSSHHHHHHH
T ss_pred cccccceeccCCceeeecCCCcHHHHHHhCCEEEEEcCCCCccchhhhccccccccceeEEEecCCCCccCHHHHhcC
Confidence 4444330 000 011233444555666666644321111111121112211 2334444567999999986
No 56
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase. In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
Probab=99.46 E-value=9.4e-13 Score=119.97 Aligned_cols=120 Identities=20% Similarity=0.234 Sum_probs=86.6
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhh-hhccccc-e---EEEcCCCCchHH
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSV-LACRYVD-E---VIIGAPWEVTKD 333 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v-~~~~~VD-~---Vvi~~~~~~~~~ 333 (420)
.++.|+|||||.||++++++|++.+|+|+|+|.++..-. +.++.++.+||.+|+ ++++.++ . +++.... ...+
T Consensus 2 gl~~G~FdP~H~GHl~ii~~a~~~~D~lii~i~s~~~~~-k~~~p~~~~eR~~mi~~al~~~~~~~~~~vP~~d~-~~~~ 79 (165)
T TIGR01527 2 GFYIGRFQPFHLGHLEVIKKIAEEVDELIIGIGSAQESH-TLENPFTAGERILMITQSLKEVGDLTYYIIPIEDI-ERNS 79 (165)
T ss_pred eEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCCceEEEEecCCc-cHHH
Confidence 578999999999999999999999999999999887422 334555778999999 6678774 3 2222222 2334
Q ss_pred HHhhc------CccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEE-EeC---CCCCCCHHHHHHHHHhc
Q 014671 334 MITTF------NICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQ-LLE---SPKSITTTSVAQRIIAN 392 (420)
Q Consensus 334 ~i~~~------~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~-~~~---~~~~~Stt~Ii~RI~~~ 392 (420)
.+..+ ++|+++.|... .....++.|..+ .++ ++ .+|+|.|.++|.++
T Consensus 80 ~w~~~v~~~~p~~D~vf~~~~~-----------~~~~f~e~g~~v~~~p~~~r~-~~S~T~IR~~i~~~ 136 (165)
T TIGR01527 80 IWVSYVESMTPPFDVVYSNNPL-----------VRRLFKEAGYEVKRPPMFNRK-EYSGTEIRRRMLNG 136 (165)
T ss_pred HHHHHHHHhCCCCCEEEECCHH-----------HHHHHHHcCCEEEECCCcCCC-cccHHHHHHHHHcC
Confidence 55666 78999988311 134556677543 444 44 79999999999875
No 57
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial. This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
Probab=99.45 E-value=6.1e-13 Score=119.98 Aligned_cols=119 Identities=22% Similarity=0.311 Sum_probs=79.8
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccccc----EEEeCCCccccH
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVD----EVIANAPYAITE 142 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD----~vi~~~p~~~~~ 142 (420)
+++++|+||++|.||+.++++|++.+|.|++++..++ .| .+..+.++|++|++.+- .| .|.... +++.
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~d~v~~~~~~~p----~k-~~~~~~~~R~~m~~~a~-~~~~~~~v~~~e--~yt~ 72 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALFDEVIVAVAKNP----SK-KPLFSLEERVELIKDAT-KHLPNVRVDVFD--GLLV 72 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCcCHHHHHHHHHHHH-hhCCCeEEcCcc--chHH
Confidence 3789999999999999999999999999999987542 34 47889999999998752 33 222211 2334
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHh---CC-------eEEEeccCC---CCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK---VG-------RYKQIKRTE---GVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~---~g-------~~~~v~r~~---~ISST~Ir~rI~~~ 203 (420)
+++ +.++.++++.|-|-. .+++.+.+ .. ..+.+...+ .||||.||+++..+
T Consensus 73 dt~----~~l~~~~~i~G~~~~------~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 136 (155)
T TIGR01510 73 DYA----KELGATFIVRGLRAA------TDFEYELQMALMNKHLAPEIETVFLMASPEYAFVSSSLVKEIASFG 136 (155)
T ss_pred HHH----HHcCCCEEEecCcch------hhHHHHHHHHhhCcccccCCcEEEEeCCcchhhccHHHHHHHHHcC
Confidence 444 567889999985421 11111110 11 112222232 69999999999865
No 58
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.45 E-value=1.3e-12 Score=122.74 Aligned_cols=136 Identities=21% Similarity=0.182 Sum_probs=91.3
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccEEEeC----
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIAN---- 135 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vi~~---- 135 (420)
.+++++++|+|||+|.||+.++++|++.. |.+++.+++.+. .|. +.+.+.++|++|++. +...+.+...
T Consensus 3 ~~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~ 79 (203)
T PRK00071 3 MKRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPP---HKPQKPLAPLEHRLAMLELAIADNPRFSVSDIEL 79 (203)
T ss_pred CcEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCCHHHHHHHHHHHhcCCCceEEeHHHH
Confidence 35688999999999999999999999876 788888776652 343 368899999999974 3343433321
Q ss_pred --CCccccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC----------------------
Q 014671 136 --APYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT---------------------- 188 (420)
Q Consensus 136 --~p~~~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~---------------------- 188 (420)
...++|.+.++.+.+.+ ++ ++++|.|--..-..+..++.+-+...+.+++|.
T Consensus 80 ~~~~~syT~~tl~~l~~~~-p~~~~~fiiG~D~l~~l~~W~~~~~i~~~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~~i 158 (203)
T PRK00071 80 ERPGPSYTIDTLRELRARY-PDVELVFIIGADALAQLPRWKRWEEILDLVHFVVVPRPGYPLEALALPALQQLLEAAGAI 158 (203)
T ss_pred hCCCCCCHHHHHHHHHHHC-CCCcEEEEEcHHHhhhcccccCHHHHHHhCcEEEEeCCCCCccccchhHHHHhhccCCCE
Confidence 23445667777665555 44 899999843322333344444444444433331
Q ss_pred -------CCCChHHHHHHHHhc
Q 014671 189 -------EGVSSTDIVGRILSS 203 (420)
Q Consensus 189 -------~~ISST~Ir~rI~~~ 203 (420)
..||||+||+++.++
T Consensus 159 ~~~~~~~~~ISST~IR~~l~~g 180 (203)
T PRK00071 159 TLLDVPLLAISSTAIRERIKEG 180 (203)
T ss_pred EEEeCCCCccCHHHHHHHHHcC
Confidence 249999999999854
No 59
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=99.45 E-value=5.8e-13 Score=124.55 Aligned_cols=137 Identities=23% Similarity=0.198 Sum_probs=103.8
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccE------EE
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDE------VI 133 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~------vi 133 (420)
.+++++++|+|||+|.||+.+.++|.+.. |.|++.++..+ ..|. +...+.++|++|++- ++.... .+
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~---p~k~~~~~a~~~~R~~Ml~la~~~~~~~~v~~~e~ 78 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVP---PHKKKKELASAEHRLAMLELAIEDNPRFEVSDREI 78 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCC---CCCCCccCCCHHHHHHHHHHHHhcCCCcceeHHHH
Confidence 46789999999999999999999999975 77777776655 3344 679999999999973 322222 22
Q ss_pred eCCCccccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCC---------------------
Q 014671 134 ANAPYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTE--------------------- 189 (420)
Q Consensus 134 ~~~p~~~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~--------------------- 189 (420)
...+.++|-++++.+.+++++| ++++|.|--..-..+-.++.+-+.+++..++|..
T Consensus 79 ~r~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~l~~l~~W~~~~ell~~~~~vv~~Rp~~~~~~~~~~~~~~~~~~~~~~ 158 (197)
T COG1057 79 KRGGPSYTIDTLEHLRQEYGPDVELYFIIGADNLASLPKWYDWDELLKLVTFVVAPRPGYGELELSLLSSGGAIILLDLP 158 (197)
T ss_pred HcCCCcchHHHHHHHHHHhCCCCcEEEEEehHHhhhhhhhhhHHHHHHhCCEEEEecCCchhhhhhhhcCCceEEEccCc
Confidence 3345567788998877688888 5899999654445566777888888887766632
Q ss_pred --CCChHHHHHHHHhc
Q 014671 190 --GVSSTDIVGRILSS 203 (420)
Q Consensus 190 --~ISST~Ir~rI~~~ 203 (420)
.||||.||+++..+
T Consensus 159 ~~~ISSt~IR~~~~~~ 174 (197)
T COG1057 159 RLDISSTEIRERIRRG 174 (197)
T ss_pred cccCchHHHHHHHhCC
Confidence 49999999999865
No 60
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.45 E-value=4.7e-13 Score=118.64 Aligned_cols=89 Identities=22% Similarity=0.309 Sum_probs=75.0
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCC-CCchHHH
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP-WEVTKDM 334 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~-~~~~~~~ 334 (420)
+++++.|+|||+|.||++++++|.+++|+|+|++..+. .++|.++.++|..+++ +++..+.|.+... .+++.++
T Consensus 2 kiai~~GSFDPih~GHl~ii~~A~~~~D~v~v~v~~np----~K~~~~s~e~R~~~l~~~~~~~~~v~v~~~~~~l~v~~ 77 (140)
T PRK13964 2 KIAIYPGSFDPFHKGHLNILKKALKLFDKVYVVVSINP----DKSNASDLDSRFKNVKNKLKDFKNVEVLINENKLTAEI 77 (140)
T ss_pred eEEEEeeeeCCCCHHHHHHHHHHHHhCCEEEEEeccCC----CCCCCCCHHHHHHHHHHHHcCCCCcEEecCcCCcHHHH
Confidence 68999999999999999999999999999999999875 4558999999998884 4566666666432 4678899
Q ss_pred HhhcCccEEEEcCCc
Q 014671 335 ITTFNICLVVHGTVS 349 (420)
Q Consensus 335 i~~~~~d~vv~G~d~ 349 (420)
.++.+.+++|+|=..
T Consensus 78 ~~~~~a~~ivrGlR~ 92 (140)
T PRK13964 78 AKKLGANFLIRSARN 92 (140)
T ss_pred HHHCCCeEEEEecCC
Confidence 999999999999543
No 61
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
Probab=99.44 E-value=2.1e-13 Score=104.81 Aligned_cols=64 Identities=52% Similarity=0.768 Sum_probs=57.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccccc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVD 130 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD 130 (420)
+++++|+||++|.||+.++++|+++++.+++++.+|+.....|..++++.++|.++++.+.+++
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~~~~vv~i~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 64 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKGEPVFSLEERLEMLKALKYVD 64 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECchHhccccCCCCCCCHHHHHHHHHHhcccc
Confidence 4799999999999999999999999999999999987765555459999999999999987765
No 62
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=99.44 E-value=7.4e-13 Score=122.25 Aligned_cols=132 Identities=17% Similarity=0.193 Sum_probs=93.1
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCC---EEEEEEecCcccc----C-C-CCCCCCHHHHHHhhhhccccceEEEcCCC-
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGD---FLLVGIYTDQIVR----G-S-YHPIMHLHERSLSVLACRYVDEVIIGAPW- 328 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd---~LiVgV~~D~~v~----~-~-~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~- 328 (420)
|++-|+||.+|.||..+|++|+++++ ...|.++-|.... . + ..|+++.++|+++++++. ||.|++.+..
T Consensus 2 vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l~-vd~v~~~~f~~ 80 (180)
T cd02064 2 VVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESLG-VDYLLVLPFDK 80 (180)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHcC-CCEEEEeCCCH
Confidence 78999999999999999999999975 3566666555432 1 2 248999999999999998 9999985321
Q ss_pred ----CchHHHHhhc----CccEEEEcCCcCCCCCCCCCCChH---HHHHhCC-eEEEeCC----CCCCCHHHHHHHHHhc
Q 014671 329 ----EVTKDMITTF----NICLVVHGTVSETNTPLTGQSDPY---EVAKSMG-IFQLLES----PKSITTTSVAQRIIAN 392 (420)
Q Consensus 329 ----~~~~~~i~~~----~~d~vv~G~d~~~~~~~~~~~d~~---~~~k~~G-~~~~~~~----~~~~Stt~Ii~RI~~~ 392 (420)
....+|++.+ +|+.+|.|.||....- ..+ +.. ...+..| ....++. ...+|||.|.+.|.+.
T Consensus 81 ~~~~~s~~~Fi~~il~~~~~~~ivvG~Df~FG~~-~~g-~~~~L~~~~~~~g~~v~~v~~~~~~~~~iSST~IR~~i~~G 158 (180)
T cd02064 81 EFASLSAEEFVEDLLVKLNAKHVVVGFDFRFGKG-RSG-DAELLKELGKKYGFEVTVVPPVTLDGERVSSTRIREALAEG 158 (180)
T ss_pred HHHcCCHHHHHHHHHhhcCCeEEEEccCCCCCCC-CCC-CHHHHHHhhhhcCcEEEEeCcEecCCcEEcHHHHHHHHHhC
Confidence 1345565543 7999999999976521 111 222 2334445 3455554 3679999999988655
Q ss_pred h
Q 014671 393 H 393 (420)
Q Consensus 393 ~ 393 (420)
.
T Consensus 159 ~ 159 (180)
T cd02064 159 D 159 (180)
T ss_pred C
Confidence 4
No 63
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial. This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
Probab=99.42 E-value=2.2e-12 Score=116.40 Aligned_cols=130 Identities=20% Similarity=0.261 Sum_probs=89.0
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cccceEEEcCCCCchHHHHh
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYVDEVIIGAPWEVTKDMIT 336 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~VD~Vvi~~~~~~~~~~i~ 336 (420)
++++.|+|||+|.||+.++++|++.+|.|+++++.+. .+.+..+.++|+.|++.+ ..-+.+.+......+.+.++
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~d~v~~~~~~~p----~k~~~~~~~~R~~m~~~a~~~~~~~~v~~~e~yt~dt~~ 76 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALFDEVIVAVAKNP----SKKPLFSLEERVELIKDATKHLPNVRVDVFDGLLVDYAK 76 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhCCEEEEEEcCCC----CCCCCcCHHHHHHHHHHHHhhCCCeEEcCccchHHHHHH
Confidence 4789999999999999999999999999999998553 445889999999999775 44455555444457889999
Q ss_pred hcCccEEEEcCCcCCCCCCCCCCChHHHHH----hCCeEEEeCCC--CCCCHHHHHHHHHhch
Q 014671 337 TFNICLVVHGTVSETNTPLTGQSDPYEVAK----SMGIFQLLESP--KSITTTSVAQRIIANH 393 (420)
Q Consensus 337 ~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k----~~G~~~~~~~~--~~~Stt~Ii~RI~~~~ 393 (420)
.+++++++.|-+.-.+ +. .........+ .......+..+ .++|||.|.+|+..++
T Consensus 77 ~l~~~~~i~G~~~~~~-~~-~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g~ 137 (155)
T TIGR01510 77 ELGATFIVRGLRAATD-FE-YELQMALMNKHLAPEIETVFLMASPEYAFVSSSLVKEIASFGG 137 (155)
T ss_pred HcCCCEEEecCcchhh-HH-HHHHHHhhCcccccCCcEEEEeCCcchhhccHHHHHHHHHcCC
Confidence 9999999999542111 10 0000000000 01222222222 2799999999998764
No 64
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.41 E-value=2.2e-12 Score=124.50 Aligned_cols=118 Identities=21% Similarity=0.169 Sum_probs=79.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-ccc----------ccE
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKW----------VDE 131 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~----------VD~ 131 (420)
+++++++|+||++|.||+.++++|.+.. |++++.+..++ ..| ....+.++|++|++. ++. .|.
T Consensus 22 ~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~p---p~K-~~~~~~~~Rl~M~~lAi~~~~~~~~~~~v~~~ 97 (243)
T PRK06973 22 RRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQP---WQK-ADVSAAEHRLAMTRAAAASLVLPGVTVRVATD 97 (243)
T ss_pred ceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcC---CCC-CCCCCHHHHHHHHHHHHHhccCCCceEEEeHh
Confidence 4578999999999999999999999875 88888887765 234 567799999999973 221 111
Q ss_pred EEeCCCccccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEec
Q 014671 132 VIANAPYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIK 186 (420)
Q Consensus 132 vi~~~p~~~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~ 186 (420)
-+.....++|.+.++.+-+++.++ ++++|.|--..-..+..++.+-+...+++++
T Consensus 98 Ei~~~g~syTidTL~~l~~~~~p~~~~~fiiG~D~l~~l~~W~~~~~L~~~~~lvV~~ 155 (243)
T PRK06973 98 EIEHAGPTYTVDTLARWRERIGPDASLALLIGADQLVRLDTWRDWRRLFDYAHLCAAT 155 (243)
T ss_pred hhhCCCCCcHHHHHHHHHHHcCCCCCEEEEEchhhHhhcCCcccHHHHHHhCCEEEEE
Confidence 122223456678888776777455 7899998544334444445444444444333
No 65
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
Probab=99.39 E-value=2.1e-12 Score=120.19 Aligned_cols=134 Identities=19% Similarity=0.172 Sum_probs=91.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-ccccEEEe------CCC
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEVIA------NAP 137 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD~vi~------~~p 137 (420)
+++++|+|||+|.||..+++.|++.+ |.+++.+..++. .|..+..+.++|++|++.+ .....+.. ...
T Consensus 1 i~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~m~~~~~~~~~~i~v~~~e~~~~~ 77 (192)
T cd02165 1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPP---HKPPKPASFEHRLEMLKLAIEDNPKFEVSDIEIKRDG 77 (192)
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCHHHHHHHHHHHHcCCCCEEEeHHHHhCCC
Confidence 36899999999999999999999998 999988876542 3435788999999999853 22222322 112
Q ss_pred ccccHHHHHHHHhhcC-cc-EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC--------------------------C
Q 014671 138 YAITEQFMNRLFNEHK-ID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT--------------------------E 189 (420)
Q Consensus 138 ~~~~~~fl~~ll~~~~-~d-~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~--------------------------~ 189 (420)
..+|.+.++.+.+.+. .+ ++++|.|--.....+..++.+-+...+.+++|. .
T Consensus 78 ~~~t~~tl~~l~~~~p~~~~~~liG~D~l~~~~~W~~~~~i~~~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (192)
T cd02165 78 PSYTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELLSLVHLVVAPRPGYPIEDASLEKLLLPGGRIILLDNPLL 157 (192)
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEcHHHhhhcccccCHHHHHHhCcEEEEeCCCCCcccchhhhhccCCCcEEEecCCcc
Confidence 3456677777665552 34 788899853333334444555555555555442 2
Q ss_pred CCChHHHHHHHHhc
Q 014671 190 GVSSTDIVGRILSS 203 (420)
Q Consensus 190 ~ISST~Ir~rI~~~ 203 (420)
.||||+||+++.++
T Consensus 158 ~iSST~IR~~~~~g 171 (192)
T cd02165 158 NISSTEIRERLKNG 171 (192)
T ss_pred ccCHHHHHHHHHcC
Confidence 49999999999854
No 66
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes. The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
Probab=99.39 E-value=8e-13 Score=117.79 Aligned_cols=121 Identities=28% Similarity=0.355 Sum_probs=79.7
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhcc----c-cc--cEEEeCC
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKG--PPVLSMEERLALVSGL----K-WV--DEVIANA 136 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~~----~-~V--D~vi~~~ 136 (420)
+|+++|+||++|.||+.+|++|.+++ +.+++|+++|+... .|. .++++.++|+++++.+ . .+ +.+-+..
T Consensus 1 ~v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~-~k~~~~~i~s~e~R~~~l~~~l~~~~~~~~~~i~~i~d 79 (143)
T cd02164 1 KVAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLK-NKSLKELIEPYEERIANLHEFLVDLKPTLKYEIVPIDD 79 (143)
T ss_pred CEEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcc-cCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEccC
Confidence 48899999999999999999999998 88999999998443 333 3689999999999863 1 01 1222344
Q ss_pred CccccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHH-hCC----eEEEecc------CCCCChHHHHH
Q 014671 137 PYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-KVG----RYKQIKR------TEGVSSTDIVG 198 (420)
Q Consensus 137 p~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk-~~g----~~~~v~r------~~~ISST~Ir~ 198 (420)
||..+.. .-.+|++|+...-..|.. ..+..+ +.| ++..++. ...||||.||+
T Consensus 80 ~~Gpt~~-------~~~~d~lVVS~ET~~~~~---~iN~~R~~~gl~pl~i~~v~~v~~~~~~~kiSST~iR~ 142 (143)
T cd02164 80 PYGPTGT-------DPDLEAIVVSPETYPGAL---KINRKREENGLSPLEIVVVPLVKADEDGEKISSTRIRR 142 (143)
T ss_pred CCCCccc-------CCCCCEEEEcHHHhhhHH---HHHHHHHHCCCCceeEEEEEeeccCCCCCeecchhhhC
Confidence 5443321 135789999877544322 222222 233 1233332 23599999996
No 67
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=99.35 E-value=5.5e-12 Score=115.99 Aligned_cols=133 Identities=17% Similarity=0.100 Sum_probs=90.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-ccc--cEEEe-C------
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV--DEVIA-N------ 135 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~V--D~vi~-~------ 135 (420)
++++++|+|||+|.||+.+++++ +..|++++.+.... +.+ ++..+.++|++|++.+ ... ..+.+ +
T Consensus 3 ~i~ifGGSFDP~H~GHl~ia~~~-~~~d~v~~vP~~~~---~~~-k~~~~~~~R~~M~~~ai~~~~~~~~~v~~~E~~~~ 77 (174)
T PRK08887 3 KIAVFGSAFNPPSLGHKSVIESL-SHFDLVLLVPSIAH---AWG-KTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELY 77 (174)
T ss_pred eEEEeCCCCCCCCHHHHHHHHHh-hcCCEEEEEECCCC---ccc-CCCCCHHHHHHHHHHHHhccCCCceEEehHHhhhc
Confidence 57899999999999999999996 45698888876521 112 3677999999999752 111 12221 0
Q ss_pred --CCccccHHHHHHHHhhcC-cc-EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 136 --APYAITEQFMNRLFNEHK-ID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 136 --~p~~~~~~fl~~ll~~~~-~d-~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
.+..+|.+++..+.+++. .+ ++++|.|-......+..++.+-+...+...++...||||+||+++..+
T Consensus 78 ~~~~~~yT~~tl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~i~~~~~l~~~~~~~~ISST~IR~~l~~g 149 (174)
T PRK08887 78 APDESVTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYKADEITQRWTVMACPEKVPIRSTDIRNALQNG 149 (174)
T ss_pred cCCCCcchHHHHHHHHHHCCCCeEEEEEccchHHHHHHhCCHHHHHhhCeEEEeCCCCCcCHHHHHHHHHcC
Confidence 222345677777666552 22 577798854333334446666566667777776789999999999854
No 68
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
Probab=99.35 E-value=7e-12 Score=116.93 Aligned_cols=132 Identities=20% Similarity=0.216 Sum_probs=86.4
Q ss_pred EEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHh-ccccccEEEeC------CCc
Q 014671 69 YMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVS-GLKWVDEVIAN------APY 138 (420)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~-~~~~VD~vi~~------~p~ 138 (420)
+++|+|||+|.||+.++++|.+.. |.+++.+...+. .|. +...+.++|++|++ ++...+.+... ...
T Consensus 1 i~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~p---~k~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~~~~ 77 (193)
T TIGR00482 1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPP---HKKTYEAASSHHRLAMLKLAIEDNPKFEVDDFEIKRGGP 77 (193)
T ss_pred CccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCEEEeHHHHhCCCC
Confidence 368999999999999999999985 778887776653 343 34579999999997 33333333321 223
Q ss_pred cccHHHHHHHHhhcC-cc-EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC----------------------------
Q 014671 139 AITEQFMNRLFNEHK-ID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT---------------------------- 188 (420)
Q Consensus 139 ~~~~~fl~~ll~~~~-~d-~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~---------------------------- 188 (420)
++|.+.++.+-+++. .+ ++++|.|--..-..+..++.+-+...+.+++|.
T Consensus 78 syT~~tl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~i~~~~~~iv~~R~g~~~~~~~~~~~~~~~~~~~i~~~~~~~ 157 (193)
T TIGR00482 78 SYTIDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLELVHLVIVPRPGYTLDKALLEKAILRMHHGNLTLLHNPR 157 (193)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEEcHHHhhhhccccCHHHHHHhCcEEEEeCCCCCcchhhhHHHHhcccCCcEEEEcCCc
Confidence 456677877666552 23 788999843322233344444444444444431
Q ss_pred CCCChHHHHHHHHhc
Q 014671 189 EGVSSTDIVGRILSS 203 (420)
Q Consensus 189 ~~ISST~Ir~rI~~~ 203 (420)
..||||+||+++.++
T Consensus 158 ~~iSST~IR~~l~~g 172 (193)
T TIGR00482 158 VPISSTEIRQRIRQG 172 (193)
T ss_pred cccCHHHHHHHHHcC
Confidence 259999999999854
No 69
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=99.33 E-value=2.3e-11 Score=121.13 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=94.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEE---EEEEecCccccC------CCCCCCCHHHHHHhhhhccccceEEEcCCC
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVRG------SYHPIMHLHERSLSVLACRYVDEVIIGAPW 328 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~L---iVgV~~D~~v~~------~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~ 328 (420)
.|++-|+||.+|.||..+|++|+++++.+ .|.++-|...+. ...++++.+||...+++|. ||.+++.+..
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~g-VD~~~~~~F~ 93 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAELG-VDYVLVLPFD 93 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHcC-CCEEEEecCC
Confidence 79999999999999999999999998765 345555554321 2348999999999999998 9999984321
Q ss_pred -----CchHHHHhh-----cCccEEEEcCCcCCCCCCCCCCChHHH---HHhCC-eEEEeCC----CCCCCHHHHHHHHH
Q 014671 329 -----EVTKDMITT-----FNICLVVHGTVSETNTPLTGQSDPYEV---AKSMG-IFQLLES----PKSITTTSVAQRII 390 (420)
Q Consensus 329 -----~~~~~~i~~-----~~~d~vv~G~d~~~~~~~~~~~d~~~~---~k~~G-~~~~~~~----~~~~Stt~Ii~RI~ 390 (420)
-..++|++. ++|+.+|.|.||.... ...-+...+ .+..| .+..++. ...+|||.|.+.|.
T Consensus 94 ~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~--~~~G~~~~L~~~~~~~g~~v~~v~~~~~~~~~ISST~IR~~I~ 171 (305)
T PRK05627 94 EEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGK--KRAGDFELLKEAGKEFGFEVTIVPEVKEDGERVSSTAIRQALA 171 (305)
T ss_pred HHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCC--CCCCCHHHHHHHHHHcCcEEEEeccEecCCCcCchHHHHHHHH
Confidence 145667764 8999999999997652 111122222 22234 3444433 36799999999886
Q ss_pred hchH
Q 014671 391 ANHE 394 (420)
Q Consensus 391 ~~~~ 394 (420)
+..-
T Consensus 172 ~G~i 175 (305)
T PRK05627 172 EGDL 175 (305)
T ss_pred cCCH
Confidence 6543
No 70
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain. N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
Probab=99.30 E-value=4.7e-12 Score=117.16 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=81.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-cc--cc--EEEe-CCC-cc-
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KW--VD--EVIA-NAP-YA- 139 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~--VD--~vi~-~~p-~~- 139 (420)
++++|+||++|.||+.++++|.+.+|+|+|++.+.+.. +.+ ++.++.+||++|++.+ .. +| .+.. ..| +.
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~~~vii~i~s~~~~-~~~-~~p~~~~eR~~mi~~~~~~~~~~~~rv~i~pi~D~~~ 79 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKAKKVIILIGSARTA-RNI-KNPWTSEEREVMIEAALSDAGADLARVHFRPLRDHLY 79 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCeEEEEeCCCCCC-CCC-CCCcCHHHHHHHHHHHHhccCCCcceEEEEecCCCCC
Confidence 58999999999999999999999999999999876532 122 3568999999999873 21 11 2221 111 11
Q ss_pred ccHHHHHH---HHh---hcCccEEEEcCCCCCCCCCccHHH-HHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 140 ITEQFMNR---LFN---EHKIDYIIHGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 140 ~~~~fl~~---ll~---~~~~d~vV~G~D~~~g~~g~~~~~-~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
.+.-+..+ ... .-+++++++|.|... ...|. .+.+.+ +..++..+.+|||+||++|..+
T Consensus 80 ~~~~W~~~v~~~v~~~~~~~~~i~~~g~~kd~----~~~~~~lfpe~~-~~~~p~~~~iSsT~IR~~i~~~ 145 (181)
T cd02168 80 SDNLWLAEVQQQVLEIAGGSASVGLVGHRKDA----SSYYLRSFPQWD-YLEVPNYPDLNATDIRRAYFEG 145 (181)
T ss_pred ChHHHHHHHHHhChHhhCCCCcEEEeCCccCC----CccceeecCCcC-eecCccccccCHHHHHHHHHhc
Confidence 12222222 111 125688999977621 11111 112222 3355556689999999999863
No 71
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal. This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=99.30 E-value=1.9e-11 Score=111.22 Aligned_cols=120 Identities=19% Similarity=0.219 Sum_probs=83.2
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccc------eEEEcCCCCch
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVD------EVIIGAPWEVT 331 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD------~Vvi~~~~~~~ 331 (420)
.++.|+|||||.||+.++++|.+.+|.|+|+|.++....+ +.+.++.+||+.|++ +++.+| .|+.......
T Consensus 2 ~v~~G~FdP~H~GHl~~i~~a~~~~d~l~v~v~s~~~~~~-~~~~~~~~~R~~mi~~~~~~~~~~~~~v~v~~~~d~~~- 79 (163)
T cd02166 2 ALFIGRFQPFHLGHLKVIKWILEEVDELIIGIGSAQESHT-LENPFTAGERVLMIRRALEEEGIDLSRYYIIPVPDIER- 79 (163)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCEEEEEecCCCCCCC-CCCCCCHHHHHHHHHHHHHhcCCCcCeEEEEecCCCCc-
Confidence 5789999999999999999999999999999987764432 345578899999998 667775 3333222222
Q ss_pred HHHHhhc------CccEEEEcCCcCCCCCCCCCCChHHHHHhCCe-EEEeCC--CCCCCHHHHHHHHHh
Q 014671 332 KDMITTF------NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLES--PKSITTTSVAQRIIA 391 (420)
Q Consensus 332 ~~~i~~~------~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~~~~--~~~~Stt~Ii~RI~~ 391 (420)
.+...++ +.|+++-|.+|... .....|. +..++. .+++|+|.|.+.|.+
T Consensus 80 ~~~w~~~v~~~vp~~div~~g~~~~~~-----------~f~~~g~~v~~~p~~~~~~~s~t~iR~~~~~ 137 (163)
T cd02166 80 NSLWVSYVESLTPPFDVVYSGNPLVAR-----------LFKEAGYEVRRPPMFNREEYSGTEIRRLMLG 137 (163)
T ss_pred hHHHHHHHHHHCCCCCEEEECchHHHH-----------hhhhcCCeEecCCcccCCCCCHHHHHHHHHc
Confidence 2344444 67888888543221 2223443 335565 347999999999864
No 72
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Probab=99.29 E-value=2.5e-11 Score=107.66 Aligned_cols=88 Identities=24% Similarity=0.300 Sum_probs=65.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCC-ccccHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAP-YAITEQ 143 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p-~~~~~~ 143 (420)
+++++.|+|||+|.||+.++++|.+++|+++|++..++ .| +++++.++|+++++. ++....+-.... -.+..+
T Consensus 2 kiai~~GSFDPih~GHl~ii~~A~~~~D~v~v~v~~np----~K-~~~~s~e~R~~~l~~~~~~~~~v~v~~~~~~l~v~ 76 (140)
T PRK13964 2 KIAIYPGSFDPFHKGHLNILKKALKLFDKVYVVVSINP----DK-SNASDLDSRFKNVKNKLKDFKNVEVLINENKLTAE 76 (140)
T ss_pred eEEEEeeeeCCCCHHHHHHHHHHHHhCCEEEEEeccCC----CC-CCCCCHHHHHHHHHHHHcCCCCcEEecCcCCcHHH
Confidence 57999999999999999999999999999999998764 34 478999999999964 222232222110 122334
Q ss_pred HHHHHHhhcCccEEEEcCC
Q 014671 144 FMNRLFNEHKIDYIIHGDD 162 (420)
Q Consensus 144 fl~~ll~~~~~d~vV~G~D 162 (420)
| .++.+++++|.|=.
T Consensus 77 ~----~~~~~a~~ivrGlR 91 (140)
T PRK13964 77 I----AKKLGANFLIRSAR 91 (140)
T ss_pred H----HHHCCCeEEEEecC
Confidence 4 46789999999954
No 73
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=99.26 E-value=9e-11 Score=107.97 Aligned_cols=127 Identities=20% Similarity=0.312 Sum_probs=82.2
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-c--cc--cEE-EeCCC-cc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-K--WV--DEV-IANAP-YA 139 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~--~V--D~v-i~~~p-~~ 139 (420)
+++++|.||++|.||+.++++|.+.+|+|+|++.+... ..+....++.+||++|++.. . .+ +.+ +...| ..
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~d~v~v~i~s~~~--~~~~~~p~~~~~R~~mi~~a~~~~~~~~~~~~~~pi~D~~ 79 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEVDELIIGIGSAQE--SHTLKNPFTAGERILMIRKALEEEGIDLSRYYIIPIPDIE 79 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEEEEEecCCCC--CCCCCCCCCHHHHHHHHHHHHhcCCCCcceeeEecCCCcc
Confidence 68999999999999999999999999999998865431 12223457889999999852 1 12 122 22112 22
Q ss_pred ccHHHHHHHHhh-cCccEEEEcCCCCCCCCCccHHHHHHhCCe-EEEec--cCCCCChHHHHHHHHhc
Q 014671 140 ITEQFMNRLFNE-HKIDYIIHGDDPCLLPDGTDAYALAKKVGR-YKQIK--RTEGVSSTDIVGRILSS 203 (420)
Q Consensus 140 ~~~~fl~~ll~~-~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~-~~~v~--r~~~ISST~Ir~rI~~~ 203 (420)
..+.+...+... ..+|+++.|+.+ .....++.|- +...+ ....+|+|+||++|.++
T Consensus 80 ~~~~w~~~v~~~~~~~d~v~~~~~y--------~~~~f~~~g~~v~~~p~~~~~~iSsT~IR~~i~~g 139 (174)
T PRK01153 80 FNSIWVSHVESYTPPFDVVYTGNPL--------VARLFREAGYEVRQPPMFNREEYSGTEIRRRMIEG 139 (174)
T ss_pred hHHHHHHHHHHhCCCCCEEEECChH--------HHHhchhhCCeEecCCccccCCCCHHHHHHHHHcC
Confidence 333344433222 256899998532 1223334443 44544 34679999999999754
No 74
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Probab=99.26 E-value=1.7e-11 Score=123.92 Aligned_cols=134 Identities=16% Similarity=0.199 Sum_probs=88.0
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-cccc--EEE-eCCCc
Q 014671 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVD--EVI-ANAPY 138 (420)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD--~vi-~~~p~ 138 (420)
.+..+++++|.||++|.||+.++++|.+.+|+|+|++.+...-. .+ +..++.+||++|++.+ +.++ .+. ...|-
T Consensus 4 ~~~~~~~~~G~F~P~H~GHl~~i~~a~~~~d~l~v~i~s~~~~~-~~-~~~~~~~~R~~mi~~~~~~~~~~r~~~~pi~d 81 (340)
T PRK05379 4 RRYDYLVFIGRFQPFHNGHLAVIREALSRAKKVIVLIGSADLAR-SI-KNPFSFEERAQMIRAALAGIDLARVTIRPLRD 81 (340)
T ss_pred ccceEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEEccCCCCC-cC-CCCCCHHHHHHHHHHHhhcCCCceEEEEECCC
Confidence 34678999999999999999999999999999999998754221 22 3458999999999864 3232 222 11121
Q ss_pred c-cc-HHH---HHHHHh---hcCccEEEEcCCCCCCCCCccHHH-HHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 139 A-IT-EQF---MNRLFN---EHKIDYIIHGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 139 ~-~~-~~f---l~~ll~---~~~~d~vV~G~D~~~g~~g~~~~~-~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
. +. .-+ +..... ..++|++++|.|+. ....|. ...+.| +..++..+++|+|+||++|..+
T Consensus 82 ~~~~~~~W~~~v~~~v~~~~~~~~~~~~~g~~~~----~~~~~~~~f~~~~-~~~~~~~~~~s~T~iR~~~~~~ 150 (340)
T PRK05379 82 SLYNDSLWLAEVQAAVAEHAGADARIGLIGHEKD----ASSYYLRSFPQWE-LVDVPNTEDLSATEIRDAYFEG 150 (340)
T ss_pred CCcChHHHHHHHHHHHHhccCCCCcEEEECCcCC----CChHHHHhccccc-cccCCcccccCccHHHHHHHcC
Confidence 1 12 212 222221 25788999997762 222232 222333 3356667889999999999865
No 75
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Probab=99.26 E-value=3.2e-11 Score=122.03 Aligned_cols=135 Identities=21% Similarity=0.127 Sum_probs=94.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHh--CCeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccEEEe------
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIA------ 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~l--gd~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vi~------ 134 (420)
|++++++|+|||+|.||+.++++|.+. .|++++.+...+ +.|. .+..+.++|++|++. +...+.+..
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~---p~K~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~ 77 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYIN---PFKKKQKASNGEHRLNMLKLALKNLPKMEVSDFEIK 77 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEeHHHHh
Confidence 357899999999999999999999987 388888887655 3344 345556999999963 222222222
Q ss_pred CCCccccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC--------------------CCC
Q 014671 135 NAPYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT--------------------EGV 191 (420)
Q Consensus 135 ~~p~~~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~--------------------~~I 191 (420)
....++|.+.++.+.+++ |+ ++++|.|.-..-..+..++.+-+...+++++|. ..|
T Consensus 78 ~~~~syt~~tl~~l~~~~-p~~~~~~iiG~D~~~~l~~W~~~~~l~~~~~~iv~~R~g~~~~~~~~~~~i~~~~~~~~~i 156 (342)
T PRK07152 78 RQNVSYTIDTIKYFKKKY-PNDEIYFIIGSDNLEKFKKWKNIEEILKKVQIVVFKRKKNINKKNLKKYNVLLLKNKNLNI 156 (342)
T ss_pred CCCCCcHHHHHHHHHHhC-CCCcEEEEecHHHhhhcccccCHHHHHHhCCEEEEECCCCCcccccccCcEEEecCCcccc
Confidence 122345667776665555 44 889999965444455567777777777777663 249
Q ss_pred ChHHHHHHHHhc
Q 014671 192 SSTDIVGRILSS 203 (420)
Q Consensus 192 SST~Ir~rI~~~ 203 (420)
|||+||+++..+
T Consensus 157 SST~IR~~~~~~ 168 (342)
T PRK07152 157 SSTKIRKGNLLG 168 (342)
T ss_pred CHHHHHHHHHcC
Confidence 999999999865
No 76
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Probab=99.22 E-value=5.3e-11 Score=105.19 Aligned_cols=127 Identities=26% Similarity=0.294 Sum_probs=87.9
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc----cccc-c-EEEeCC
Q 014671 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG----LKWV-D-EVIANA 136 (420)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~----~~~V-D-~vi~~~ 136 (420)
.+...|.++|+||.+|.||..||+.|..+|+.+++|++||+.+..++..++.|.+.|++-|.. .+.- . .+-++.
T Consensus 3 ~kfm~vavGGTFd~LH~GHk~LL~~A~~~G~~v~IGlTsDe~~k~~k~~~i~p~~~R~~~l~~fl~~~~~~~~~iv~i~D 82 (158)
T COG1019 3 IKFMKVAVGGTFDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKKEKIEPYEVRLRNLRNFLESIKADYEEIVPIDD 82 (158)
T ss_pred ccceEEEecccchhhhhhHHHHHHHHHHhCCeEEEEEccHHHHHHhccccCCcHHHHHHHHHHHHHHhcCCcceEEEecC
Confidence 456789999999999999999999999999999999999998876666899999999998875 1111 1 333466
Q ss_pred CccccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHH-hCCe----EEEecc-----CCCCChHHHHHH
Q 014671 137 PYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-KVGR----YKQIKR-----TEGVSSTDIVGR 199 (420)
Q Consensus 137 p~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk-~~g~----~~~v~r-----~~~ISST~Ir~r 199 (420)
||..+.+ .-..+++|+...-.-+ .-..+.++ +.|. +..++. ...+|||.||+-
T Consensus 83 p~G~t~~-------~~~~e~iVVS~ET~~~---Al~IN~~R~~~Gl~pL~I~~i~~v~aedg~~iSSTrIrrg 145 (158)
T COG1019 83 PYGPTVE-------DPDFEAIVVSPETYPG---ALKINEIREKRGLPPLEIIVIDYVLAEDGKPISSTRIRRG 145 (158)
T ss_pred CCCCCCC-------cCceeEEEEccccchh---HHHHHHHHHHCCCCCeEEEEEehhhhhcCCccchhhhhhh
Confidence 7765532 1246888888653221 22222222 2331 344443 125999999954
No 77
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins. NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
Probab=99.20 E-value=1.3e-10 Score=105.18 Aligned_cols=126 Identities=21% Similarity=0.200 Sum_probs=80.0
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhcc-cc---ccEEE---eCCCcc
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLALVSGL-KW---VDEVI---ANAPYA 139 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~~-~~---VD~vi---~~~p~~ 139 (420)
++++|+||++|.||+.++++|.+.+|+|+|++.+.+.. |. +..++.++|++|++.. .. +.... .+.|+.
T Consensus 2 gl~~G~F~P~H~GHl~li~~a~~~~d~v~vi~~~~~~~---~~~~~~~~~~~R~~mi~~a~~~~~~~~v~~~~~~d~~~~ 78 (158)
T cd02167 2 GIVFGKFAPLHTGHVYLIYKALSQVDELLIIVGSDDTR---DDARTGLPLEKRLRWLREIFPDQENIVVHTLNEPDIPEY 78 (158)
T ss_pred EEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCcc---cccCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999887632 22 5678999999999853 22 21111 122321
Q ss_pred c--c---HHHHHHHHhhc---CccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEe--cc-CCCCChHHHHHHHH
Q 014671 140 I--T---EQFMNRLFNEH---KIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQI--KR-TEGVSSTDIVGRIL 201 (420)
Q Consensus 140 ~--~---~~fl~~ll~~~---~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v--~r-~~~ISST~Ir~rI~ 201 (420)
- - ...+...+.+. ++|+++.|+++.. ..+......| +...+ .+ ...+|+|.||+-..
T Consensus 79 ~~~w~~w~~~v~~~v~~~~~~~~~~vf~~~~~~~-----~~~~~~~~~~~~~~~v~~~r~~~~iSaT~IR~~p~ 147 (158)
T cd02167 79 PNGWDIWSNRVKTLIAENTRCRPDIVFTAEEYEA-----AFELVLAYLGAQVVLVDPDRTDISVSATQIRENPF 147 (158)
T ss_pred chhHHHHHHHHHHHHhhhcCCCCCEEEEccCcch-----hhhhHhhcCCCeEEEeccccccCCcCHHHHHhCHH
Confidence 0 1 12233333321 6789999977521 1111122233 33332 23 35799999998644
No 78
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes. The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
Probab=99.15 E-value=1.2e-10 Score=103.75 Aligned_cols=121 Identities=22% Similarity=0.335 Sum_probs=78.9
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcC-CEEEEEEecCccccCCC--CCCCCHHHHHHhhhhc-ccc------ceEEEcCCC
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVRGSY--HPIMHLHERSLSVLAC-RYV------DEVIIGAPW 328 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~g-d~LiVgV~~D~~v~~~~--~pi~~~~ER~~~v~~~-~~V------D~Vvi~~~~ 328 (420)
|++.|+||++|.||..+|++|.+++ |.++|||++|+....++ .++++.++|+++++.+ ... +-+-+.+|+
T Consensus 2 v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~~k~~~~~i~s~e~R~~~l~~~l~~~~~~~~~~i~~i~d~~ 81 (143)
T cd02164 2 VAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLKNKSLKELIEPYEERIANLHEFLVDLKPTLKYEIVPIDDPY 81 (143)
T ss_pred EEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcccCCCCCCCCCHHHHHHHHHHHHHhcCCCceEEEEEccCCC
Confidence 7899999999999999999999998 89999999998554432 2699999999888765 221 233345666
Q ss_pred CchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe----EEEe------CCCCCCCHHHHHH
Q 014671 329 EVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLL------ESPKSITTTSVAQ 387 (420)
Q Consensus 329 ~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~~------~~~~~~Stt~Ii~ 387 (420)
+.+. ..-..|.+|-..+-.. .+......-++.|- .+.+ .....+|||.|.+
T Consensus 82 Gpt~---~~~~~d~lVVS~ET~~-----~~~~iN~~R~~~gl~pl~i~~v~~v~~~~~~~kiSST~iR~ 142 (143)
T cd02164 82 GPTG---TDPDLEAIVVSPETYP-----GALKINRKREENGLSPLEIVVVPLVKADEDGEKISSTRIRR 142 (143)
T ss_pred CCcc---cCCCCCEEEEcHHHhh-----hHHHHHHHHHHCCCCceeEEEEEeeccCCCCCeecchhhhC
Confidence 5542 1234677766543211 12222223344451 1122 2345699998865
No 79
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Probab=99.09 E-value=4.1e-10 Score=100.26 Aligned_cols=88 Identities=25% Similarity=0.394 Sum_probs=69.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-ccccEEEeCCCccccHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVDEVIANAPYAITEQ 143 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD~vi~~~p~~~~~~ 143 (420)
++++++.|+|||+++||+.+|++|.++.|+++|+|..++ .| +|+++++||.+|++.. +..+.|-.. .| ..
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~Fd~viVaV~~np----~K-~plFsleER~~l~~~~~~~l~nV~V~-~f---~~ 72 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALFDEVIVAVAINP----SK-KPLFSLEERVELIREATKHLPNVEVV-GF---SG 72 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhccEEEEEEEeCC----Cc-CCCcCHHHHHHHHHHHhcCCCceEEE-ec---cc
Confidence 568999999999999999999999999999999998765 34 7999999999999852 233333321 12 12
Q ss_pred HHHHHHhhcCccEEEEcC
Q 014671 144 FMNRLFNEHKIDYIIHGD 161 (420)
Q Consensus 144 fl~~ll~~~~~d~vV~G~ 161 (420)
.+-++.++.++.++|.|=
T Consensus 73 Llvd~ak~~~a~~ivRGL 90 (159)
T COG0669 73 LLVDYAKKLGATVLVRGL 90 (159)
T ss_pred HHHHHHHHcCCCEEEEec
Confidence 555566789999999994
No 80
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain. N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
Probab=99.09 E-value=3e-10 Score=105.14 Aligned_cols=125 Identities=13% Similarity=0.150 Sum_probs=80.0
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cc--cc--eEEEcC-CCC-ch
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RY--VD--EVIIGA-PWE-VT 331 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~--VD--~Vvi~~-~~~-~~ 331 (420)
.++.|+|||||.||+.++++|.+.+|+|+|+|.+..... .+++.++.+||..|++.+ .. +| .|.+.. +.. ..
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~~~vii~i~s~~~~~-~~~~p~~~~eR~~mi~~~~~~~~~~~~rv~i~pi~D~~~~ 80 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKAKKVIILIGSARTAR-NIKNPWTSEEREVMIEAALSDAGADLARVHFRPLRDHLYS 80 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCeEEEEeCCCCCCC-CCCCCcCHHHHHHHHHHHHhccCCCcceEEEEecCCCCCC
Confidence 578999999999999999999999999999998875432 223568999999999875 32 12 333311 111 01
Q ss_pred HH----HHhh-------cCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHh
Q 014671 332 KD----MITT-------FNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIA 391 (420)
Q Consensus 332 ~~----~i~~-------~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~ 391 (420)
.+ .+++ .++|+++.|.+++.+.+... ....-| +..++...++|+|.|.+++..
T Consensus 81 ~~~W~~~v~~~v~~~~~~~~~i~~~g~~kd~~~~~~~------lfpe~~-~~~~p~~~~iSsT~IR~~i~~ 144 (181)
T cd02168 81 DNLWLAEVQQQVLEIAGGSASVGLVGHRKDASSYYLR------SFPQWD-YLEVPNYPDLNATDIRRAYFE 144 (181)
T ss_pred hHHHHHHHHHhChHhhCCCCcEEEeCCccCCCcccee------ecCCcC-eecCccccccCHHHHHHHHHh
Confidence 11 1111 24688888877643322110 001112 234455567999999999987
No 81
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Probab=99.08 E-value=1.1e-09 Score=110.73 Aligned_cols=130 Identities=15% Similarity=0.231 Sum_probs=87.2
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cccc--eEEEcC-CCC
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYVD--EVIIGA-PWE 329 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~VD--~Vvi~~-~~~ 329 (420)
+..+++++.|+||+||.||+.++++|.+.+|.|+|++.+.......+ +.++.+||..|++.+ +.+| .|.+.. +..
T Consensus 4 ~~~~~~~~~G~F~P~H~GHl~~i~~a~~~~d~l~v~i~s~~~~~~~~-~~~~~~~R~~mi~~~~~~~~~~r~~~~pi~d~ 82 (340)
T PRK05379 4 RRYDYLVFIGRFQPFHNGHLAVIREALSRAKKVIVLIGSADLARSIK-NPFSFEERAQMIRAALAGIDLARVTIRPLRDS 82 (340)
T ss_pred ccceEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEEccCCCCCcCC-CCCCHHHHHHHHHHHhhcCCCceEEEEECCCC
Confidence 34689999999999999999999999999999999998764333233 448999999999776 5443 233311 111
Q ss_pred c-hHH----HHhh-------cCccEEEEcCCcCCCCCCCCCCChHHH--HHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014671 330 V-TKD----MITT-------FNICLVVHGTVSETNTPLTGQSDPYEV--AKSMGIFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 330 ~-~~~----~i~~-------~~~d~vv~G~d~~~~~~~~~~~d~~~~--~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
. ..+ .++. -++|+++.|.++..+ ++.. ...-|.. .++..+++|+|.|.++|+.+.
T Consensus 83 ~~~~~~W~~~v~~~v~~~~~~~~~~~~~g~~~~~~--------~~~~~~f~~~~~~-~~~~~~~~s~T~iR~~~~~~~ 151 (340)
T PRK05379 83 LYNDSLWLAEVQAAVAEHAGADARIGLIGHEKDAS--------SYYLRSFPQWELV-DVPNTEDLSATEIRDAYFEGR 151 (340)
T ss_pred CcChHHHHHHHHHHHHhccCCCCcEEEECCcCCCC--------hHHHHhccccccc-cCCcccccCccHHHHHHHcCC
Confidence 1 111 2221 467889999765332 2221 1122322 456677899999999997644
No 82
>PRK07143 hypothetical protein; Provisional
Probab=99.07 E-value=5e-09 Score=103.11 Aligned_cols=134 Identities=18% Similarity=0.247 Sum_probs=96.6
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcccc-CCCC-CCCCHHHHHHhhhhccccceEEEcCCC----
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVR-GSYH-PIMHLHERSLSVLACRYVDEVIIGAPW---- 328 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~-~~~~-pi~~~~ER~~~v~~~~~VD~Vvi~~~~---- 328 (420)
..+.|++-|.||-+|.||..+|++|++.++.++|...+++... +++. ++++.+||...+++|. ||.+++-+..
T Consensus 14 ~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~~~~vV~tF~~P~~~~~~~~~~l~~~~er~~~l~~~G-vd~~~~~~F~~~~a 92 (279)
T PRK07143 14 FEKPTFVLGGFESFHLGHLELFKKAKESNDEIVIVIFKNPENLPKNTNKKFSDLNSRLQTLANLG-FKNIILLDFNEELQ 92 (279)
T ss_pred CCCeEEEEccCCcCCHHHHHHHHHHHHCCCcEEEEEeCChHHhcccCcccCCCHHHHHHHHHHCC-CCEEEEeCCCHHHh
Confidence 3568999999999999999999999999999999888765432 1223 7999999999999986 6888774321
Q ss_pred -CchHHHHhh---cCccEEEEcCCcCCCCCCCCCCChHHHHHhCC-eEEEeC----CCCCCCHHHHHHHHHhc
Q 014671 329 -EVTKDMITT---FNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLE----SPKSITTTSVAQRIIAN 392 (420)
Q Consensus 329 -~~~~~~i~~---~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~~~----~~~~~Stt~Ii~RI~~~ 392 (420)
-.+++|++. ++++.+|.|.|+.... ...-+... ++..+ .+..++ ....+|||.|.+-|.+.
T Consensus 93 ~ls~e~Fi~~ll~l~~~~iVvG~Df~FG~--~r~G~~~~-L~~~~~~v~~v~~~~~~g~~ISST~IR~~l~~G 162 (279)
T PRK07143 93 NLSGNDFIEKLTKNQVSFFVVGKDFRFGK--NASWNADD-LKEYFPNVHIVEILKINQQKISTSLLKEFIEFG 162 (279)
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCcccCC--CCCCCHHH-HHHhCCcEEEeCCEEcCCcEEcHHHHHHHHHcC
Confidence 135667665 7999999999987662 12223433 34444 444443 23469999998776544
No 83
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Probab=99.03 E-value=3.3e-09 Score=109.54 Aligned_cols=130 Identities=19% Similarity=0.236 Sum_probs=84.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhh-----hhcCCCCCCcHHHHHHHHhcc-ccccEEEe----
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSGL-KWVDEVIA---- 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i-----~~~K~~pi~t~eER~~ll~~~-~~VD~vi~---- 134 (420)
.++++++|+|||+|.||+.+|++|.+++|.|+|+|.+++.- ...+.+..++.++|.+|++.. +..+.|.+
T Consensus 52 ~~~~v~~G~FdP~H~GH~~lI~~A~~~~d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~~~~~v~v~~~~ 131 (399)
T PRK08099 52 KKIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIKIHAFN 131 (399)
T ss_pred CcEEEEEEecCCCCHHHHHHHHHHHHHCCeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 45899999999999999999999999999999999887631 111225688999999999863 33222211
Q ss_pred --CC-CccccH----HHHHHHHhh--cCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEec--c-CCCCChHHHHHHHH
Q 014671 135 --NA-PYAITE----QFMNRLFNE--HKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRIL 201 (420)
Q Consensus 135 --~~-p~~~~~----~fl~~ll~~--~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r-~~~ISST~Ir~rI~ 201 (420)
+. +|.... +.+...+.+ .++++++.|.++ +...| ++..| +...++ | ..+||+|.||+--.
T Consensus 132 ~~~~~~~~~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~-----d~~~~--~~~~~~~~~~vd~~r~~~~iSaT~IR~~p~ 204 (399)
T PRK08099 132 EEGMEPYPHGWDVWSNGIKAFMAEKGIQPDVIYTSEEQ-----DAPQY--EEHLGIETVLVDPKRTFMNISGTQIRENPF 204 (399)
T ss_pred CCCCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEeCCC-----ChHHH--HHhcCCceeeeccccccCCcCHHHHhhCHH
Confidence 11 222221 223333333 368999999775 11333 33323 344444 3 34799999998654
No 84
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
Probab=98.98 E-value=3.6e-09 Score=101.18 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=51.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC--Ce-E-EE----EEecchhhhhcCCCCCCcHHHHHHHHh-ccccccEEE----
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALG--DE-L-VV----GVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVI---- 133 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lg--d~-L-iV----gV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vi---- 133 (420)
..+++|+||++|.||+.++++|.+.. +. + ++ ....++ ..| ....+.++|++|++ ++.....+.
T Consensus 2 ~~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~~~---~~k-~~~~~~~~Rl~Ml~lai~~~~~~~v~~~ 77 (225)
T cd09286 2 VLLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVNDA---YGK-KGLASAKHRVAMCRLAVQSSDWIRVDDW 77 (225)
T ss_pred EEEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeeccC---CCC-CCCCCHHHHHHHHHHHHccCCCEEEEeh
Confidence 46789999999999999999998875 32 1 21 122221 123 56789999999998 332222222
Q ss_pred --eCCCccccHHHHHHHHhhc
Q 014671 134 --ANAPYAITEQFMNRLFNEH 152 (420)
Q Consensus 134 --~~~p~~~~~~fl~~ll~~~ 152 (420)
....+.+|-+.++.+.+++
T Consensus 78 E~~~~~~syT~~TL~~l~~~~ 98 (225)
T cd09286 78 ESLQPEWMRTAKVLRHHREEI 98 (225)
T ss_pred hccCCccccHHHHHHHHHHHh
Confidence 2222445667777766555
No 85
>PLN02388 phosphopantetheine adenylyltransferase
Probab=98.97 E-value=5.7e-09 Score=95.99 Aligned_cols=135 Identities=20% Similarity=0.264 Sum_probs=91.1
Q ss_pred CCCCCCeEEEEcCccccCCHHHHHHHHHHHhcC-CEEEEEEecCccccCC--CCCCCCHHHHHHhhhhc-cc------cc
Q 014671 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVRGS--YHPIMHLHERSLSVLAC-RY------VD 320 (420)
Q Consensus 251 ~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g-d~LiVgV~~D~~v~~~--~~pi~~~~ER~~~v~~~-~~------VD 320 (420)
.+......|++.|+||.+|.||-.+|++|.+++ +.++||+++|+....+ +..++++++|...+.+. .- +.
T Consensus 14 ~~~~~~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~~fl~~~~p~~~~~ 93 (177)
T PLN02388 14 SPPNSYGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVEEYIKSIKPELVVQ 93 (177)
T ss_pred CCCCcCCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHHHHHHHcCCCceEE
Confidence 334446789999999999999999999999998 4899999999976542 33899999999888764 21 23
Q ss_pred eEEEcCCCCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCC-----eEE--Ee--C-CCCCCCHHHHHHHHH
Q 014671 321 EVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-----IFQ--LL--E-SPKSITTTSVAQRII 390 (420)
Q Consensus 321 ~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-----~~~--~~--~-~~~~~Stt~Ii~RI~ 390 (420)
-+-+.+|++.+. ..-++|.+|-+.+-..+ +......-+..| +++ .+ + ....+|||.|.+|..
T Consensus 94 i~~i~D~~Gpt~---~~~~~d~LVVS~ET~~g-----~~~IN~~R~e~Gl~pL~i~~v~~v~~~~~~~kiSST~iR~~~~ 165 (177)
T PLN02388 94 AEPIIDPYGPSI---VDENLEAIVVSKETLPG-----GLSVNKKRAERGLSQLKIEVVDIVPEESTGNKLSSTTLRRLEA 165 (177)
T ss_pred EEEecCCCCCcc---cCCCCCEEEEcHhHhhh-----HHHHHHHHHHCCCCCeEEEEEEeEecCCCCCccCHHHHHHHHH
Confidence 444567776542 23457778777642221 221222333444 221 11 1 245799999999987
Q ss_pred hch
Q 014671 391 ANH 393 (420)
Q Consensus 391 ~~~ 393 (420)
++.
T Consensus 166 ~~~ 168 (177)
T PLN02388 166 EKA 168 (177)
T ss_pred HHH
Confidence 665
No 86
>cd02156 nt_trans nucleotidyl transferase superfamily. nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
Probab=98.97 E-value=3.7e-10 Score=95.03 Aligned_cols=57 Identities=23% Similarity=0.280 Sum_probs=49.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~ 126 (420)
+++.|+||++|.||+.++++|++++|.+++++..++.... ..++.+.++|.++++++
T Consensus 2 ~~~~G~Fdp~H~GH~~l~~~a~~~~d~~i~~i~~~~~~~~--~~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 2 ARFPGEPGYLHIGHAKLICRAKGIADQCVVRIDDNPPVKV--WQDPHELEERKESIEED 58 (105)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHHhCCcEEEEEcCCCcccc--cCChHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999988875432 23689999999999985
No 87
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Probab=98.97 E-value=5.4e-09 Score=100.70 Aligned_cols=99 Identities=20% Similarity=0.208 Sum_probs=59.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhC--CeE-EEEEecchhhhhcCCCCCCcHHHHHHHHh-ccccccEE------Ee
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DEL-VVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEV------IA 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~L-iVgV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~v------i~ 134 (420)
....+.+|+||++|.||+.+++.|++.- |.+ +|.+-..+.-...+.+...+.++|++|++ ++.....+ +.
T Consensus 22 ~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k~~~~~~~~Rl~Ml~lai~~~~~~~V~~~E~~ 101 (236)
T PLN02945 22 RVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKKKGLASAEHRIQMCQLACEDSDFIMVDPWEAR 101 (236)
T ss_pred eEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccccCCCCCHHHHHHHHHHHhcCCCCeEecHHHhC
Confidence 3456778899999999999999988864 332 22222222111112236779999999997 32222211 22
Q ss_pred CCCccccHHHHHHHHhhcC-------c--c-EEEEcCCC
Q 014671 135 NAPYAITEQFMNRLFNEHK-------I--D-YIIHGDDP 163 (420)
Q Consensus 135 ~~p~~~~~~fl~~ll~~~~-------~--d-~vV~G~D~ 163 (420)
...++.|.+.++.+.++++ + + ++++|.|.
T Consensus 102 ~~~~syT~dtL~~l~~~~~~~~~~~~~~~~~~fiiG~D~ 140 (236)
T PLN02945 102 QSTYQRTLTVLARVETSLNNNGLASEESVRVMLLCGSDL 140 (236)
T ss_pred CCCCccHHHHHHHHHHHhccccccCCCCceEEEEechhH
Confidence 2224456677766655552 2 3 78999983
No 88
>PRK13670 hypothetical protein; Provisional
Probab=98.96 E-value=2.2e-09 Score=110.28 Aligned_cols=104 Identities=19% Similarity=0.325 Sum_probs=77.4
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCC-eEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCcccc----H
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGD-ELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAIT----E 142 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd-~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~----~ 142 (420)
+=++==|||+|.||+.+|++|++.+. .++++|-|-..+.+ ..+++++.++|.+++..+ +||.|++ .||.+. +
T Consensus 4 ~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qr-g~p~i~~~~~R~~~a~~~-GvD~vie-lpf~~a~~sae 80 (388)
T PRK13670 4 TGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQR-GEPAIVDKWTRAKMALEN-GVDLVVE-LPFLYSVQSAD 80 (388)
T ss_pred eEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCC-CCCCCCCHHHHHHHHHHc-CCCEEEE-eCCchHhCCHH
Confidence 33444699999999999999999762 34445555544433 226699999999999997 9999998 566544 4
Q ss_pred HHHHH---HHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCe
Q 014671 143 QFMNR---LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 143 ~fl~~---ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~ 181 (420)
+|+.. ++++++++.||+|.| .++.+.|++.++
T Consensus 81 ~F~~~aV~iL~~l~v~~lv~G~e-------~g~~~~L~~~~~ 115 (388)
T PRK13670 81 FFAEGAVSILDALGVDSLVFGSE-------SGDIEDFQKIAK 115 (388)
T ss_pred HHHHhHHHHHHHcCCCEEEEcCC-------CCCHHHHHHHHH
Confidence 78887 778899999999999 344555655543
No 89
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.94 E-value=8.5e-09 Score=94.91 Aligned_cols=124 Identities=20% Similarity=0.262 Sum_probs=78.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-c--cc--ceEEEcC-C-CCc
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-R--YV--DEVIIGA-P-WEV 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~--~V--D~Vvi~~-~-~~~ 330 (420)
++++.|+||+||.||+.++++|.+.+|.|+|+|.+...-. ++.+.++.+||..|++.. . .+ +.+.+.. + ...
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~d~v~v~i~s~~~~~-~~~~p~~~~~R~~mi~~a~~~~~~~~~~~~~~pi~D~~~ 80 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEVDELIIGIGSAQESH-TLKNPFTAGERILMIRKALEEEGIDLSRYYIIPIPDIEF 80 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEEEEEecCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCCCcceeeEecCCCcch
Confidence 4788999999999999999999999999999997543111 234457999999988753 2 22 2333321 2 222
Q ss_pred hHHHHhhc-----CccEEEEcCCcCCCCCCCCCCChHHHHHhCCe-EEEeC--CCCCCCHHHHHHHHHhch
Q 014671 331 TKDMITTF-----NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLE--SPKSITTTSVAQRIIANH 393 (420)
Q Consensus 331 ~~~~i~~~-----~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~~~--~~~~~Stt~Ii~RI~~~~ 393 (420)
...+.... .+|+++-|..+.. ......|. ....+ ....+|+|.|.++|.++.
T Consensus 81 ~~~w~~~v~~~~~~~d~v~~~~~y~~-----------~~f~~~g~~v~~~p~~~~~~iSsT~IR~~i~~g~ 140 (174)
T PRK01153 81 NSIWVSHVESYTPPFDVVYTGNPLVA-----------RLFREAGYEVRQPPMFNREEYSGTEIRRRMIEGD 140 (174)
T ss_pred HHHHHHHHHHhCCCCCEEEECChHHH-----------HhchhhCCeEecCCccccCCCCHHHHHHHHHcCC
Confidence 22233323 5588777742211 11223443 23333 345799999999998654
No 90
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins. NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
Probab=98.90 E-value=1.5e-08 Score=91.91 Aligned_cols=129 Identities=18% Similarity=0.153 Sum_probs=82.9
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cccceEEE---cCCCCc---
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYVDEVII---GAPWEV--- 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~VD~Vvi---~~~~~~--- 330 (420)
+.++.|+|||+|.||+.++++|.+.+|.|+|++.++..-+ .+++.++.++|..|++.. +.-+.+.+ ..+...
T Consensus 1 igl~~G~F~P~H~GHl~li~~a~~~~d~v~vi~~~~~~~~-~~~~~~~~~~R~~mi~~a~~~~~~~~v~~~~~~d~~~~~ 79 (158)
T cd02167 1 IGIVFGKFAPLHTGHVYLIYKALSQVDELLIIVGSDDTRD-DARTGLPLEKRLRWLREIFPDQENIVVHTLNEPDIPEYP 79 (158)
T ss_pred CEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCccc-ccCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCCc
Confidence 3578999999999999999999999999999999886332 344678999999888664 55344444 111111
Q ss_pred --h---H----HHHhhc---CccEEEEcCCcCCCCCCCCCCChHHHHHhCCe-EEEeC--C-CCCCCHHHHHHHHHhchH
Q 014671 331 --T---K----DMITTF---NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLE--S-PKSITTTSVAQRIIANHE 394 (420)
Q Consensus 331 --~---~----~~i~~~---~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~~~--~-~~~~Stt~Ii~RI~~~~~ 394 (420)
- . ..+.+. ++|+++-|.++... .+....+.|. ...++ + ...+|.|.|.+-..++++
T Consensus 80 ~~w~~w~~~v~~~v~~~~~~~~~~vf~~~~~~~~--------~~~~~~~~~~~~~~v~~~r~~~~iSaT~IR~~p~~~w~ 151 (158)
T cd02167 80 NGWDIWSNRVKTLIAENTRCRPDIVFTAEEYEAA--------FELVLAYLGAQVVLVDPDRTDISVSATQIRENPFRYWY 151 (158)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCCEEEEccCcchh--------hhhHhhcCCCeEEEeccccccCCcCHHHHHhCHHHHHH
Confidence 1 1 122221 56888877654221 1111234454 22222 2 457999999988777665
Q ss_pred h
Q 014671 395 A 395 (420)
Q Consensus 395 ~ 395 (420)
.
T Consensus 152 ~ 152 (158)
T cd02167 152 H 152 (158)
T ss_pred h
Confidence 4
No 91
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.83 E-value=6.1e-08 Score=91.13 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=66.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEc------C
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIG------A 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~------~ 326 (420)
++++++.|+||++|.||+.++++|++.. |.+++.++.....+ ...+.++.++|+.|++. ++..+.+.+. .
T Consensus 4 ~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~~~k-~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~~ 82 (203)
T PRK00071 4 KRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPPHK-PQKPLAPLEHRLAMLELAIADNPRFSVSDIELERP 82 (203)
T ss_pred cEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHhcCCCceEEeHHHHhCC
Confidence 5799999999999999999999999866 88888777664222 22368899999988854 5777766664 1
Q ss_pred CCCchHHHHhhc---Ccc---EEEEcCCc
Q 014671 327 PWEVTKDMITTF---NIC---LVVHGTVS 349 (420)
Q Consensus 327 ~~~~~~~~i~~~---~~d---~vv~G~d~ 349 (420)
....|.+.++.+ -|+ +++.|.|.
T Consensus 83 ~~syT~~tl~~l~~~~p~~~~~fiiG~D~ 111 (203)
T PRK00071 83 GPSYTIDTLRELRARYPDVELVFIIGADA 111 (203)
T ss_pred CCCCHHHHHHHHHHHCCCCcEEEEEcHHH
Confidence 123345555443 355 67889874
No 92
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.83 E-value=4.3e-08 Score=90.22 Aligned_cols=131 Identities=13% Similarity=0.070 Sum_probs=83.1
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-ccc--ceEEEcCC-----
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYV--DEVIIGAP----- 327 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~V--D~Vvi~~~----- 327 (420)
++|.+..|+|||+|.||+.+.+++ ...|.+++..+... ..+++..+.++|+.|++.+ +.. +.+.+...
T Consensus 2 ~~i~ifGGSFDP~H~GHl~ia~~~-~~~d~v~~vP~~~~---~~~k~~~~~~~R~~M~~~ai~~~~~~~~~v~~~E~~~~ 77 (174)
T PRK08887 2 KKIAVFGSAFNPPSLGHKSVIESL-SHFDLVLLVPSIAH---AWGKTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELY 77 (174)
T ss_pred CeEEEeCCCCCCCCHHHHHHHHHh-hcCCEEEEEECCCC---cccCCCCCHHHHHHHHHHHHhccCCCceEEehHHhhhc
Confidence 478999999999999999999996 46799888865521 1112778999999988654 432 34555221
Q ss_pred ----CCchHHHHhhcC---cc---EEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014671 328 ----WEVTKDMITTFN---IC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 328 ----~~~~~~~i~~~~---~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
...|.+.++.++ |+ +++.|.|...+ +..|.. ...+.+... +...++..++|+|.|.+++..++
T Consensus 78 ~~~~~~yT~~tl~~l~~~~p~~~~~~iiG~D~l~~-l~~W~~-~~~i~~~~~-l~~~~~~~~ISST~IR~~l~~g~ 150 (174)
T PRK08887 78 APDESVTTYALLTRLQELYPEADLTFVIGPDNFLK-FAKFYK-ADEITQRWT-VMACPEKVPIRSTDIRNALQNGK 150 (174)
T ss_pred cCCCCcchHHHHHHHHHHCCCCeEEEEEccchHHH-HHHhCC-HHHHHhhCe-EEEeCCCCCcCHHHHHHHHHcCC
Confidence 112334444432 32 45669875443 222322 223333333 44446667899999999997654
No 93
>cd02156 nt_trans nucleotidyl transferase superfamily. nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
Probab=98.83 E-value=2.1e-09 Score=90.48 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=51.0
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC 316 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~ 316 (420)
+++.|+||++|.||+.++++|++++|.+++++..+..... +.++.+.++|..+++++
T Consensus 2 ~~~~G~Fdp~H~GH~~l~~~a~~~~d~~i~~i~~~~~~~~-~~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 2 ARFPGEPGYLHIGHAKLICRAKGIADQCVVRIDDNPPVKV-WQDPHELEERKESIEED 58 (105)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHHhCCcEEEEEcCCCcccc-cCChHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999998876542 33799999999999988
No 94
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.83 E-value=1.7e-08 Score=94.18 Aligned_cols=60 Identities=13% Similarity=0.065 Sum_probs=51.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~ 126 (420)
....+++|-|.++|+||+.+|++|.+.||+|+|++.|...-... +..+|..||.+|++..
T Consensus 4 yd~~v~iGRFQPfH~GHl~~I~~al~~~devII~IGSA~~s~t~--~NPFTa~ER~~MI~~a 63 (196)
T PRK13793 4 FDYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMERNI--KNPFLAIEREQMILSN 63 (196)
T ss_pred eeEEEEEecCCCCcHHHHHHHHHHHHhCCEEEEEEccCCCCCCC--CCCCCHHHHHHHHHHh
Confidence 45789999999999999999999999999999999996643211 4578899999999874
No 95
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
Probab=98.82 E-value=4.9e-08 Score=90.86 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=65.0
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cccceEEEcC------CC
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYVDEVIIGA------PW 328 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~VD~Vvi~~------~~ 328 (420)
|+++.|+|||+|.||+.+++.|++.+ |.|+|.+..+... ++.+.++.++|++|++.+ +....+.+.. ..
T Consensus 1 i~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~~~--k~~~~~~~~~R~~m~~~~~~~~~~i~v~~~e~~~~~~ 78 (192)
T cd02165 1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPPH--KPPKPASFEHRLEMLKLAIEDNPKFEVSDIEIKRDGP 78 (192)
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCC--CCCCCCCHHHHHHHHHHHHcCCCCEEEeHHHHhCCCC
Confidence 46889999999999999999999998 9999988766422 224788999999998754 5556666631 12
Q ss_pred CchHHHHhhc---Ccc---EEEEcCCcC
Q 014671 329 EVTKDMITTF---NIC---LVVHGTVSE 350 (420)
Q Consensus 329 ~~~~~~i~~~---~~d---~vv~G~d~~ 350 (420)
..|.+.++.+ -|+ +++-|.|.-
T Consensus 79 ~~t~~tl~~l~~~~p~~~~~~liG~D~l 106 (192)
T cd02165 79 SYTIDTLEELRERYPNAELYFIIGSDNL 106 (192)
T ss_pred CCHHHHHHHHHHhccCCCEEEEEcHHHh
Confidence 3344444443 343 567888743
No 96
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Probab=98.79 E-value=6.6e-09 Score=92.00 Aligned_cols=125 Identities=22% Similarity=0.329 Sum_probs=84.5
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhc----ccc-c-eEEEcCC
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLAC----RYV-D-EVIIGAP 327 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~----~~V-D-~Vvi~~~ 327 (420)
+..+|.+.|+||.+|.||-.+|+.|-.+|+.+++|+++|+.+++ ++.++.|++.|...|... +.= + -|-+.+|
T Consensus 4 kfm~vavGGTFd~LH~GHk~LL~~A~~~G~~v~IGlTsDe~~k~~k~~~i~p~~~R~~~l~~fl~~~~~~~~~iv~i~Dp 83 (158)
T COG1019 4 KFMKVAVGGTFDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKKEKIEPYEVRLRNLRNFLESIKADYEEIVPIDDP 83 (158)
T ss_pred cceEEEecccchhhhhhHHHHHHHHHHhCCeEEEEEccHHHHHHhccccCCcHHHHHHHHHHHHHHhcCCcceEEEecCC
Confidence 35689999999999999999999999999999999999999998 556999999999776552 211 1 3445777
Q ss_pred CCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe----EEEe-----CCCCCCCHHHHHH
Q 014671 328 WEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLL-----ESPKSITTTSVAQ 387 (420)
Q Consensus 328 ~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~~-----~~~~~~Stt~Ii~ 387 (420)
++.+. ..-..|++|-..+-. +........-.+.|. +..+ .....+|||.|.+
T Consensus 84 ~G~t~---~~~~~e~iVVS~ET~-----~~Al~IN~~R~~~Gl~pL~I~~i~~v~aedg~~iSSTrIrr 144 (158)
T COG1019 84 YGPTV---EDPDFEAIVVSPETY-----PGALKINEIREKRGLPPLEIIVIDYVLAEDGKPISSTRIRR 144 (158)
T ss_pred CCCCC---CcCceeEEEEccccc-----hhHHHHHHHHHHCCCCCeEEEEEehhhhhcCCccchhhhhh
Confidence 76542 222456666554311 111222223334552 2222 2335799998875
No 97
>PRK13671 hypothetical protein; Provisional
Probab=98.76 E-value=2.9e-08 Score=98.31 Aligned_cols=88 Identities=25% Similarity=0.403 Sum_probs=70.1
Q ss_pred ecccCcCCHHHHHHHHHHHHh--CCeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhccccccEEEeCCCcccc----HH
Q 014671 71 DGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAIT----EQ 143 (420)
Q Consensus 71 ~G~FD~lH~GH~~lL~qA~~l--gd~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~----~~ 143 (420)
+-.|||+|.||..++++|++. +|.+++++..++ ..|+ +.+++.++|++|+..+ +||.|++ -|+.+. +.
T Consensus 6 IaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~---~qrg~pa~~~~~~R~~ma~~~-G~DLViE-LP~~~a~~sAe~ 80 (298)
T PRK13671 6 IAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKY---TQRGEIAVASFEKRKKIALKY-GVDKVIK-LPFEYATQAAHI 80 (298)
T ss_pred EeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCC---CCCCCCCCCCHHHHHHHHHHc-CCCEEEe-ccHHHHhhchHH
Confidence 447999999999999999997 488888887776 3455 6677999999999998 9999997 454333 23
Q ss_pred HH---HHHHhhcCccEEEEcCCC
Q 014671 144 FM---NRLFNEHKIDYIIHGDDP 163 (420)
Q Consensus 144 fl---~~ll~~~~~d~vV~G~D~ 163 (420)
|- -.++..+++|.++.|.++
T Consensus 81 FA~gaV~lL~~lgvd~l~FGsE~ 103 (298)
T PRK13671 81 FAKGAIKKLNKEKIDKLIFGSES 103 (298)
T ss_pred HHHHHHHHHHHcCCCEEEECCCC
Confidence 43 237788999999999764
No 98
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.75 E-value=1.4e-07 Score=95.22 Aligned_cols=129 Identities=21% Similarity=0.203 Sum_probs=88.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEE--EeCCCcccc
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEV--IANAPYAIT 141 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~v--i~~~p~~~~ 141 (420)
.+++.+.|+|||+|+||+.++++|.+++|.++|.|..+ + +++++.++|++|++. ++..+.| +...+|-++
T Consensus 139 ~~i~~~~g~fdP~t~GH~~li~~A~~~~d~~~v~v~~~------~-~~~f~~~~R~~~v~~~~~~~~nv~v~~~~~~~is 211 (332)
T TIGR00124 139 NKIGSIVMNANPFTNGHRYLIEQAARQCDWLHLFVVKE------D-ASLFSYDERFALVKQGIQDLSNVTVHNGSAYIIS 211 (332)
T ss_pred CcEEEEEeCcCCCchHHHHHHHHHHHHCCEEEEEEEeC------C-CCCCCHHHHHHHHHHHhcCCCCEEEEecCCceec
Confidence 47899999999999999999999999999999999632 2 579999999999985 2222212 222223221
Q ss_pred H------------------------HHHHHHHhhcCccEEEEcCCCCCCCCCccHHH-HHH---------hCCeEEEecc
Q 014671 142 E------------------------QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-LAK---------KVGRYKQIKR 187 (420)
Q Consensus 142 ~------------------------~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~-~lk---------~~g~~~~v~r 187 (420)
. -|-+.+...+++..-.+|+.+..-. +..|. .++ ..-+..+++|
T Consensus 212 ~atfp~yflk~~~~~~~~~~~ld~~~f~~~ia~~l~i~~r~vg~ep~~~~--t~~yn~~m~~~~~~~~~~~~I~~~~I~R 289 (332)
T TIGR00124 212 RATFPAYFLKEQDVADDCYTEIDLKLFRYKIAPALGITHRFVGTEPLCPV--TALYNQKMKYWLEEPNDAPPIEVVEIQR 289 (332)
T ss_pred cccchhhhcCChhHHHHHHHHHHHHHHHHhchHhhCCccceeCCCCCCHh--HHHHHHHHHHhhhccCCCCCcEEEEEee
Confidence 0 1223344568888899999875422 23344 233 1235678887
Q ss_pred C----CCCChHHHHHHHHh
Q 014671 188 T----EGVSSTDIVGRILS 202 (420)
Q Consensus 188 ~----~~ISST~Ir~rI~~ 202 (420)
. ..+|.|.||+.|.+
T Consensus 290 ~~~~~~~~SASaIR~~L~~ 308 (332)
T TIGR00124 290 KLAAGGPISASTVRELLAK 308 (332)
T ss_pred ecCCCCeeCHHHHHHHHHc
Confidence 3 24999999999964
No 99
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=98.73 E-value=1.5e-08 Score=99.61 Aligned_cols=113 Identities=20% Similarity=0.257 Sum_probs=86.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CC--CCCCcHHHHHHHHhccccccEEEeCCCcccc
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT 141 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~ 141 (420)
--.|.+.|. +|.||+.||++|++.++.++|.+..+|.-... .. +.+.+.++|+++++.+ +||.++....-.+.
T Consensus 24 ig~V~TmG~---LH~GH~~LI~~a~~~a~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~~-GvD~vF~p~~~~m~ 99 (277)
T cd00560 24 IGFVPTMGA---LHEGHLSLVRRARAENDVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEEA-GVDLLFAPSVEEMY 99 (277)
T ss_pred EEEEECCCc---ccHHHHHHHHHHHHhCCEEEEEecCChhhcCCcccccccCCCHHHHHHHHHHC-CCCEEECCCHHHcC
Confidence 346789999 99999999999999999888888888753221 22 4588899999999997 89999642211222
Q ss_pred -HHHHHHHHhhcCccEEEEcC----------------------C-CCCCCCCccHHHHHHhCCe
Q 014671 142 -EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 142 -~~fl~~ll~~~~~d~vV~G~----------------------D-~~~g~~g~~~~~~lk~~g~ 181 (420)
++|+..+.+..++..+++|. | +.||.++.+....+++.++
T Consensus 100 p~~f~~~~v~~~~~~~il~G~~RpghF~GV~tvv~kLf~iv~Pd~~~FG~kd~gq~~~Lk~~~~ 163 (277)
T cd00560 100 PEGLFSTFVDVGPLSEVLEGASRPGHFRGVATVVAKLFNLVQPDRAYFGEKDAQQLAVIRRMVR 163 (277)
T ss_pred CCCCceEEEecCCCceEEecCCCCccccceeeeehhhhcccCCCeEEECCCccccHHHHHHHHH
Confidence 25554233457889999999 9 9999999999888888754
No 100
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Probab=98.65 E-value=1.7e-07 Score=96.87 Aligned_cols=134 Identities=18% Similarity=0.249 Sum_probs=86.9
Q ss_pred CCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccc-----cC-CCCCCCCHHHHHHhhhhc-cccceEEE
Q 014671 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIV-----RG-SYHPIMHLHERSLSVLAC-RYVDEVII 324 (420)
Q Consensus 252 ~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v-----~~-~~~pi~~~~ER~~~v~~~-~~VD~Vvi 324 (420)
|....+++++.|+||++|.||+.++++|.+++|.|+|+|.++..- +. +..+.++.++|..+++.. +..+.|.+
T Consensus 48 ~~~~~~~~v~~G~FdP~H~GH~~lI~~A~~~~d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~~~~~v~v 127 (399)
T PRK08099 48 PRQMKKIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIKI 127 (399)
T ss_pred hhhcCcEEEEEEecCCCCHHHHHHHHHHHHHCCeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhCCCCCEEE
Confidence 444567999999999999999999999999999999999987621 11 234789999999888765 67665655
Q ss_pred cC----C---C--C--c----hHHHHhh--cCccEEEEcCCcCCCCCCCCCCChHHHHHhCC-eEEEeCC---CCCCCHH
Q 014671 325 GA----P---W--E--V----TKDMITT--FNICLVVHGTVSETNTPLTGQSDPYEVAKSMG-IFQLLES---PKSITTT 383 (420)
Q Consensus 325 ~~----~---~--~--~----~~~~i~~--~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G-~~~~~~~---~~~~Stt 383 (420)
.. + + + . ....+.. .++|+++-|.++.. +.| .+..| .++.++. ..++|.|
T Consensus 128 ~~~~~~~~~~~~~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~d~--------~~~--~~~~~~~~~~vd~~r~~~~iSaT 197 (399)
T PRK08099 128 HAFNEEGMEPYPHGWDVWSNGIKAFMAEKGIQPDVIYTSEEQDA--------PQY--EEHLGIETVLVDPKRTFMNISGT 197 (399)
T ss_pred EecCCCCCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEeCCCCh--------HHH--HHhcCCceeeeccccccCCcCHH
Confidence 31 1 1 0 0 1112322 25788888865421 122 23334 2333432 2467888
Q ss_pred HHHHHHHhchHh
Q 014671 384 SVAQRIIANHEA 395 (420)
Q Consensus 384 ~Ii~RI~~~~~~ 395 (420)
.|.+--.++++.
T Consensus 198 ~IR~~p~~~w~~ 209 (399)
T PRK08099 198 QIRENPFRYWEY 209 (399)
T ss_pred HHhhCHHHHHHh
Confidence 887776666554
No 101
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type. E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
Probab=98.63 E-value=1.4e-07 Score=95.08 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=54.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccce-EEE
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDE-VII 324 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~-Vvi 324 (420)
++++++.|+|||+|.||+.++++|.+++|.|+|.+.....-. ++.+.++.++|+.+++. |+.... |.+
T Consensus 1 ~~i~i~~GsFdP~H~GHl~ii~~a~~~~d~v~v~~~~~~~~~-~~~~~~~~~~R~~~l~~~~~~~~~~v~v 70 (325)
T TIGR01526 1 KTIGVVFGKFYPLHTGHIYLIYEAFSKVDELHIVVGSLFYDS-KAKRPPPVQDRLRWLREIFKYQKNQIFI 70 (325)
T ss_pred CcEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCcCc-cCCCCCCHHHHHHHHHHHhccCCCeEEE
Confidence 358899999999999999999999999999999998732111 34588999999998854 576666 554
No 102
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Probab=98.61 E-value=3.1e-08 Score=97.67 Aligned_cols=110 Identities=20% Similarity=0.226 Sum_probs=81.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CC--CCCCcHHHHHHHHhccccccEEEeCCCcccc-H
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT-E 142 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~-~ 142 (420)
-|.+.|+ +|.||+.||++|++.++.++|.+..+|.-... .. +.+.|.++|.++++.+ +||.++....-.+. +
T Consensus 26 ~v~tmG~---lH~GH~~Li~~a~~~a~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~-GvD~v~~p~~~~myp~ 101 (281)
T PRK00380 26 LVPTMGA---LHEGHLSLVREARAEADIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAA-GVDLVFAPSVEEMYPQ 101 (281)
T ss_pred EEEccCc---eeHHHHHHHHHHHHhCCEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHc-CCCEEEeCCHHHCCCc
Confidence 4567777 99999999999999999888888777753221 22 4588999999999997 89999874221222 2
Q ss_pred HHHHHHHhhcCccEEEEcC----------------------CC-CCCCCCccHHHHHHhCCe
Q 014671 143 QFMNRLFNEHKIDYIIHGD----------------------DP-CLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~----------------------D~-~~g~~g~~~~~~lk~~g~ 181 (420)
+|...++.. ++..+++|. |+ .||.++.+....+++.++
T Consensus 102 ~f~~~i~~~-~~~~vl~G~~RpghF~Gv~tvv~kLf~iv~Pd~a~FG~kd~qq~~~l~~~~~ 162 (281)
T PRK00380 102 GLQTYVSVP-GLSDVLEGASRPGHFRGVATVVTKLFNIVQPDVAYFGEKDYQQLAVIRRMVA 162 (281)
T ss_pred cceeEEEcc-cccccccCCCCCccccchhhHHHHHhhccCCCeeEECCCcchhHHHHHHHHH
Confidence 454433222 267889999 99 899999988888877653
No 103
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
Probab=98.61 E-value=5.2e-07 Score=84.18 Aligned_cols=88 Identities=16% Similarity=0.110 Sum_probs=60.0
Q ss_pred EcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcC------CCCch
Q 014671 261 IDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA------PWEVT 331 (420)
Q Consensus 261 ~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~------~~~~~ 331 (420)
..|+|||+|.||+.++++|++.. |.+++..+.+...+ ......+.++|++|++ +++..+.+.+.. ....|
T Consensus 2 ~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~p~k-~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~~~~syT 80 (193)
T TIGR00482 2 FGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPPHK-KTYEAASSHHRLAMLKLAIEDNPKFEVDDFEIKRGGPSYT 80 (193)
T ss_pred ccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEEEeHHHHhCCCCCCH
Confidence 57999999999999999999875 77777666554222 1224579999999986 567666666642 12234
Q ss_pred HHHHhhc---Ccc---EEEEcCCc
Q 014671 332 KDMITTF---NIC---LVVHGTVS 349 (420)
Q Consensus 332 ~~~i~~~---~~d---~vv~G~d~ 349 (420)
.+.++.+ -|+ +++-|.|.
T Consensus 81 ~~tl~~l~~~~p~~~~~~iiG~D~ 104 (193)
T TIGR00482 81 IDTLKHLKKKYPDVELYFIIGADA 104 (193)
T ss_pred HHHHHHHHHHCCCCeEEEEEcHHH
Confidence 4544443 243 56889874
No 104
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=98.56 E-value=3.8e-07 Score=90.72 Aligned_cols=132 Identities=14% Similarity=0.145 Sum_probs=89.2
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCC----
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWE---- 329 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~---- 329 (420)
.++++-+-|+|||+|.||+.++++|.+.+|.++|.+-.. +.+.++.++|+++++. ++..+.+.+....+
T Consensus 113 ~~~~~~~~~~FDPiH~GHl~ii~~a~~~~d~~~V~i~~~------~~~~~~~e~R~~ml~~ai~~~~~v~v~~~~~l~v~ 186 (297)
T cd02169 113 GKKIAAIVMNANPFTLGHRYLVEKAAAENDWVHLFVVSE------DKSLFSFADRFKLVKKGTKHLKNVTVHSGGDYIIS 186 (297)
T ss_pred CCceEEEEecCCCCchHHHHHHHHHHhhCCeEEEEEEcC------CCCCCCHHHHHHHHHHHhCCCCCEEEEecCCeeec
Confidence 468999999999999999999999999999988888653 2578999999988865 34444333321110
Q ss_pred ----------------------chHHHH----hhcCccEEEEcCCcCCCCCCCCCCChHHHHHh---CCe-EEEeC----
Q 014671 330 ----------------------VTKDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVAKS---MGI-FQLLE---- 375 (420)
Q Consensus 330 ----------------------~~~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~---~G~-~~~~~---- 375 (420)
.+.+|+ +++++..++-|.|+....- ..++ ....+. .|. +..++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~a~lsa~~Fi~iL~~~l~~~~ivvG~Df~FG~~-r~G~--~~l~~~~~~~gf~v~~v~~~~~ 263 (297)
T cd02169 187 SATFPSYFIKEQDVVIKAQTALDARIFRKYIAPALNITKRYVGEEPFSRVT-AIYN--QTMQEELLSPAIEVIEIERKKY 263 (297)
T ss_pred cccChhhhcCChhHHHHHHhcCCHHHHHHHHHHHcCCcEEEEcCCCCCCCc-chhH--HHHHHhcccCCCEEEEeccccc
Confidence 123344 4578999999999877631 2222 222222 243 22332
Q ss_pred CCCCCCHHHHHHHHHhchHh
Q 014671 376 SPKSITTTSVAQRIIANHEA 395 (420)
Q Consensus 376 ~~~~~Stt~Ii~RI~~~~~~ 395 (420)
....+|||.|.+-|.+..-.
T Consensus 264 ~g~~ISST~IR~~l~~G~v~ 283 (297)
T cd02169 264 DGQPISASTVRQLLKEGNLE 283 (297)
T ss_pred CCcEEcHHHHHHHHHcCCHH
Confidence 23569999999888766544
No 105
>PRK13671 hypothetical protein; Provisional
Probab=98.53 E-value=2.4e-07 Score=91.83 Aligned_cols=85 Identities=16% Similarity=0.232 Sum_probs=67.3
Q ss_pred CccccCCHHHHHHHHHHHhc--CCEEEEEEecCccccCCCCCCCCHHHHHHhhhhccccceEEEcC-CCC-c--------
Q 014671 263 GAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDEVIIGA-PWE-V-------- 330 (420)
Q Consensus 263 G~FDl~H~GHi~~L~~Ak~~--gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~-~~~-~-------- 330 (420)
-+|||||.||+.++++|++. +|.+|+....|. +.+|..++++..+|++|++.+ .||-|+--+ ++. .
T Consensus 7 aeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~-~qrg~pa~~~~~~R~~ma~~~-G~DLViELP~~~a~~sAe~FA~g 84 (298)
T PRK13671 7 AEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKY-TQRGEIAVASFEKRKKIALKY-GVDKVIKLPFEYATQAAHIFAKG 84 (298)
T ss_pred eeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCC-CCCCCCCCCCHHHHHHHHHHc-CCCEEEeccHHHHhhchHHHHHH
Confidence 36999999999999999997 588888776665 444555777999999999998 799998421 111 1
Q ss_pred hHHHHhhcCccEEEEcCCc
Q 014671 331 TKDMITTFNICLVVHGTVS 349 (420)
Q Consensus 331 ~~~~i~~~~~d~vv~G~d~ 349 (420)
...++..+++|.++-|.++
T Consensus 85 aV~lL~~lgvd~l~FGsE~ 103 (298)
T PRK13671 85 AIKKLNKEKIDKLIFGSES 103 (298)
T ss_pred HHHHHHHcCCCEEEECCCC
Confidence 3568889999999999875
No 106
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type. E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
Probab=98.52 E-value=1.8e-07 Score=94.18 Aligned_cols=58 Identities=24% Similarity=0.124 Sum_probs=49.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG 125 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~ 125 (420)
++++++|+|||+|.||+.++++|.+++|+|+|++.+.+.. .|..+..+.++|++|++.
T Consensus 2 ~i~i~~GsFdP~H~GHl~ii~~a~~~~d~v~v~~~~~~~~--~~~~~~~~~~~R~~~l~~ 59 (325)
T TIGR01526 2 TIGVVFGKFYPLHTGHIYLIYEAFSKVDELHIVVGSLFYD--SKAKRPPPVQDRLRWLRE 59 (325)
T ss_pred cEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCcC--ccCCCCCCHHHHHHHHHH
Confidence 4789999999999999999999999999999999774311 133678899999999975
No 107
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Probab=98.51 E-value=8.7e-07 Score=89.85 Aligned_cols=133 Identities=19% Similarity=0.154 Sum_probs=82.3
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhc--CCEEEEEEecCccccCCCC-CCCCHHHHHHhhh-hccccceEEEcC-----
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVRGSYH-PIMHLHERSLSVL-ACRYVDEVIIGA----- 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~--gd~LiVgV~~D~~v~~~~~-pi~~~~ER~~~v~-~~~~VD~Vvi~~----- 326 (420)
++|++..|+|||+|.||+.+.++|.+. .|.+++..+.+.-- ++. +..+.++|++|++ +++..+.+.+..
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~p~--K~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~~ 78 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYINPF--KKKQKASNGEHRLNMLKLALKNLPKMEVSDFEIKR 78 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCCCC--CCCCCCCCHHHHHHHHHHHHhhCCCeEEeHHHHhC
Confidence 468999999999999999999999975 48888777654321 333 4555689998884 456656666521
Q ss_pred -CCCchHHHH---hhcCcc---EEEEcCCcCCCCCCCCCCChHHHHHhCCeEE------------------EeCC-CCCC
Q 014671 327 -PWEVTKDMI---TTFNIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQ------------------LLES-PKSI 380 (420)
Q Consensus 327 -~~~~~~~~i---~~~~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~------------------~~~~-~~~~ 380 (420)
....|.+.+ ++.-|+ +++-|.|...+ +..|. +...+.+..+.++ .++. ..++
T Consensus 79 ~~~syt~~tl~~l~~~~p~~~~~~iiG~D~~~~-l~~W~-~~~~l~~~~~~iv~~R~g~~~~~~~~~~~i~~~~~~~~~i 156 (342)
T PRK07152 79 QNVSYTIDTIKYFKKKYPNDEIYFIIGSDNLEK-FKKWK-NIEEILKKVQIVVFKRKKNINKKNLKKYNVLLLKNKNLNI 156 (342)
T ss_pred CCCCcHHHHHHHHHHhCCCCcEEEEecHHHhhh-ccccc-CHHHHHHhCCEEEEECCCCCcccccccCcEEEecCCcccc
Confidence 112233433 333354 77889885443 22222 2333333332211 1211 2469
Q ss_pred CHHHHHHHHHhc
Q 014671 381 TTTSVAQRIIAN 392 (420)
Q Consensus 381 Stt~Ii~RI~~~ 392 (420)
|||+|.+|+..+
T Consensus 157 SST~IR~~~~~~ 168 (342)
T PRK07152 157 SSTKIRKGNLLG 168 (342)
T ss_pred CHHHHHHHHHcC
Confidence 999999998765
No 108
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.51 E-value=7.3e-07 Score=81.49 Aligned_cols=60 Identities=23% Similarity=0.308 Sum_probs=51.5
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG 125 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~ 125 (420)
++++.++.|.|-++|.||+++++.|.+..|+|+|++.|+..-.. ...-+|..||..|++.
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~vDeliI~iGSa~~~~t--~~nPfTagER~~mi~~ 61 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKVDELIIVIGSAQESHT--LKNPFTAGERIPMIRD 61 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhCCEEEEEEccCccccc--ccCCCCccchhHHHHH
Confidence 46789999999999999999999999999999999999874322 1456788999999884
No 109
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain. Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
Probab=98.46 E-value=1.9e-06 Score=79.95 Aligned_cols=122 Identities=14% Similarity=0.116 Sum_probs=79.7
Q ss_pred ccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-cccceEEEcCC-------CC------
Q 014671 264 AFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYVDEVIIGAP-------WE------ 329 (420)
Q Consensus 264 ~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~VD~Vvi~~~-------~~------ 329 (420)
.|||+|.||++++++|.+.+|.++|.+.+. +.+.++.++|.+|++.. +..+.|.+... .+
T Consensus 7 ~~DPiH~GHl~i~~~a~~~~d~~~V~v~p~------~~~~~s~e~R~~Mi~~a~~~~~~v~v~~~~~~~v~~~~~~~~~~ 80 (182)
T smart00764 7 NANPFTLGHRYLVEQAAAECDWVHLFVVSE------DASLFSFDERFALVKKGTKDLDNVTVHSGSDYIISRATFPSYFL 80 (182)
T ss_pred CCCCCCHHHHHHHHHHHHHCCceEEEEEeC------CCCCCCHHHHHHHHHHHhccCCCEEEEecCCceeccccChhhhc
Confidence 699999999999999999999988888765 24678999999888664 54443333111 00
Q ss_pred -------------chHHHH----hhcCccEEEEcCCcCCCCCCCCCCChHHHH--HhCCe-EEEeCC----CCCCCHHHH
Q 014671 330 -------------VTKDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVA--KSMGI-FQLLES----PKSITTTSV 385 (420)
Q Consensus 330 -------------~~~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~--k~~G~-~~~~~~----~~~~Stt~I 385 (420)
.+++|+ +++++..++-|.|+..+.- ..+ +...+. ...|. ...+++ ...+|+|.|
T Consensus 81 ~~~~~~~~~~a~lsa~~Fi~~L~~~l~~~~ivvG~df~FG~~-~~G-~~~~L~~~~~~g~~v~~I~r~~~~g~~iSST~I 158 (182)
T smart00764 81 KEQDVVIKSQTTLDLRIFRKYIAPALGITHRYVGEEPFSPVT-AIY-NQTMKQTLLSPAIEVVEIERKKANGQPISASTV 158 (182)
T ss_pred CchhHHHHHHhcCCHHHHHHHHHHHcCceEEEEcCCCCCCCC-Ccc-CHHHHHHHhhCCCEEEEEecccCCCcEECHHHH
Confidence 123344 4589999999999877632 222 222221 23343 334433 345899999
Q ss_pred HHHHHhch
Q 014671 386 AQRIIANH 393 (420)
Q Consensus 386 i~RI~~~~ 393 (420)
.+-|.+..
T Consensus 159 R~~L~~G~ 166 (182)
T smart00764 159 RKLLKEGN 166 (182)
T ss_pred HHHHHcCC
Confidence 88775443
No 110
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.43 E-value=1.8e-06 Score=81.06 Aligned_cols=95 Identities=16% Similarity=0.107 Sum_probs=63.3
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCC-CCCCCHHHHHHhh-hhccccceEEEc-----
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSY-HPIMHLHERSLSV-LACRYVDEVIIG----- 325 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~-~pi~~~~ER~~~v-~~~~~VD~Vvi~----- 325 (420)
++++++..|+|||.|.||+.+.++|.+.- |.|+.-.+...- .++ ++.-+.++|..|+ ++++..+...+.
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~p--~k~~~~~a~~~~R~~Ml~la~~~~~~~~v~~~e~~ 79 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVPP--HKKKKELASAEHRLAMLELAIEDNPRFEVSDREIK 79 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCCC--CCCCccCCCHHHHHHHHHHHHhcCCCcceeHHHHH
Confidence 47899999999999999999999998765 555544443321 133 4799999999777 556666553331
Q ss_pred C-CCCchHH---HHh-hcCccE---EEEcCCcCC
Q 014671 326 A-PWEVTKD---MIT-TFNICL---VVHGTVSET 351 (420)
Q Consensus 326 ~-~~~~~~~---~i~-~~~~d~---vv~G~d~~~ 351 (420)
. ....|.+ .++ +++||. ++-|.|.-.
T Consensus 80 r~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~l~ 113 (197)
T COG1057 80 RGGPSYTIDTLEHLRQEYGPDVELYFIIGADNLA 113 (197)
T ss_pred cCCCcchHHHHHHHHHHhCCCCcEEEEEehHHhh
Confidence 1 1122333 344 677873 789987433
No 111
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=98.43 E-value=4.7e-07 Score=84.58 Aligned_cols=60 Identities=20% Similarity=0.310 Sum_probs=51.1
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC 316 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~ 316 (420)
..+.++.|.|.|||.||++.+++|.+.+|+|||||.|..... ..+.-|+..||.+|+...
T Consensus 4 yd~~v~iGRFQPfH~GHl~~I~~al~~~devII~IGSA~~s~-t~~NPFTa~ER~~MI~~a 63 (196)
T PRK13793 4 FDYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMER-NIKNPFLAIEREQMILSN 63 (196)
T ss_pred eeEEEEEecCCCCcHHHHHHHHHHHHhCCEEEEEEccCCCCC-CCCCCCCHHHHHHHHHHh
Confidence 467899999999999999999999999999999999965332 334678999999888665
No 112
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.42 E-value=5.5e-07 Score=90.94 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=55.7
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEc
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 325 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~ 325 (420)
+++++..+.|+|||||.||+.++++|.+++|.++|.|..+ +++.++.++|..+++. ++..+.|.+.
T Consensus 137 ~~~~i~~~~g~fdP~t~GH~~li~~A~~~~d~~~v~v~~~------~~~~f~~~~R~~~v~~~~~~~~nv~v~ 203 (332)
T TIGR00124 137 PGNKIGSIVMNANPFTNGHRYLIEQAARQCDWLHLFVVKE------DASLFSYDERFALVKQGIQDLSNVTVH 203 (332)
T ss_pred CCCcEEEEEeCcCCCchHHHHHHHHHHHHCCEEEEEEEeC------CCCCCCHHHHHHHHHHHhcCCCCEEEE
Confidence 3468999999999999999999999999999999999753 2579999999988865 4666666553
No 113
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only]
Probab=98.42 E-value=6e-07 Score=85.32 Aligned_cols=134 Identities=25% Similarity=0.284 Sum_probs=85.4
Q ss_pred cCCCCceEEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCC--CCCCcHHHHHHHHhc----ccc---c
Q 014671 60 CGKKKRVRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKG--PPVLSMEERLALVSG----LKW---V 129 (420)
Q Consensus 60 ~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~--~pi~t~eER~~ll~~----~~~---V 129 (420)
++..+..++..+|+||-+|.||.-+|..|..++ |+++|||+.|+.+.+ |. ..+-|.++|++.+.. ++. |
T Consensus 137 ~~a~~~~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~k-K~~~Eliepie~R~~~V~~Fl~~IKp~l~~ 215 (293)
T KOG3351|consen 137 GPANKFMVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKK-KVLKELIEPIEERKEHVSNFLKSIKPDLNV 215 (293)
T ss_pred cchhcceeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHH-hHHHHHhhhHHHHHHHHHHHHHhcCCCceE
Confidence 445567789999999999999999999999998 899999998887643 33 468899999998875 221 3
Q ss_pred cEEEeCCCccccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCe--EEEeccC---CCCChHHHHHHHH
Q 014671 130 DEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIKRT---EGVSSTDIVGRIL 201 (420)
Q Consensus 130 D~vi~~~p~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~--~~~v~r~---~~ISST~Ir~rI~ 201 (420)
+.+=+-.||..+- ..-..+.+|+...-..|...-.....-+...+ +..+..- +.+|+|++++.-.
T Consensus 216 ~~vpi~Dp~GPt~-------~d~elE~lVVS~ET~~Ga~aVNr~R~E~glseLai~vVell~~~~kls~t~~~~~kv 285 (293)
T KOG3351|consen 216 RVVPIHDPFGPTI-------TDPELEALVVSEETKTGATAVNRKRVERGLSELAIYVVELLYDAQKLSSTENRELKV 285 (293)
T ss_pred EEEecccCCCCCc-------cCCcceEEEEeeccccchhhhhHHHHHcCCchheEEEEeeccChhhcchhHHHHhhh
Confidence 3333345554331 11245678887765444322211111111111 3334333 3489999887544
No 114
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Probab=98.28 E-value=1.3e-05 Score=77.63 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=46.4
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhhh
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA 315 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~ 315 (420)
.++|.+..|+||++|.||+.+.++|.+.. |.+++..+.+.- .+.+..+.++|++|++.
T Consensus 21 ~~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~pp---~K~~~~~~~~Rl~M~~l 80 (243)
T PRK06973 21 PRRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQPW---QKADVSAAEHRLAMTRA 80 (243)
T ss_pred CceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcCC---CCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999998764 777777665531 23567899999998853
No 115
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=98.20 E-value=6.9e-06 Score=81.46 Aligned_cols=132 Identities=13% Similarity=0.140 Sum_probs=83.7
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcC-----CEEEEEEecCccc--cCCC-CCCCCHHHHHHhhhhccccceEEEcCCC--
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLG-----DFLLVGIYTDQIV--RGSY-HPIMHLHERSLSVLACRYVDEVIIGAPW-- 328 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~g-----d~LiVgV~~D~~v--~~~~-~pi~~~~ER~~~v~~~~~VD~Vvi~~~~-- 328 (420)
|++-|.||-+|.||-.+|++|++.+ ...++.....+.. .... .++++.+||...++++. ||.+++-+..
T Consensus 1 ~vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~~~~~l~~~~~k~~~l~~~G-vd~~~~~~F~~~ 79 (288)
T TIGR00083 1 SLAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWLTAPALTPLEDKARQLQIKG-VEQLLVVVFDEE 79 (288)
T ss_pred CEEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCccCCCCCCCHHHHHHHHHHcC-CCEEEEeCCCHH
Confidence 4677999999999999999888653 3345544443321 1111 24999999999999985 8988885431
Q ss_pred ---CchHHHHh-----hcCccEEEEcCCcCCCCCCCCCCChHHHH---HhCCeEEEe-C---CCCCCCHHHHHHHHHhch
Q 014671 329 ---EVTKDMIT-----TFNICLVVHGTVSETNTPLTGQSDPYEVA---KSMGIFQLL-E---SPKSITTTSVAQRIIANH 393 (420)
Q Consensus 329 ---~~~~~~i~-----~~~~d~vv~G~d~~~~~~~~~~~d~~~~~---k~~G~~~~~-~---~~~~~Stt~Ii~RI~~~~ 393 (420)
-.+++|++ ++++..+|.|.|+....- ..-+...+. +..|..+.+ + ....+|||.|.+-|.+..
T Consensus 80 ~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~--~~G~~~~L~~~~~~~g~~v~~~~~~~~~~~ISST~IR~~l~~G~ 157 (288)
T TIGR00083 80 FANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHD--RQGDFLLLQLFGNTTIFCVIVKQLFCQDIRISSSAIRQALKNGD 157 (288)
T ss_pred HHcCCHHHHHHHHHHhccCCcEEEECCCccCCCC--CCCCHHHHHHhccccCcEEEEeccccCCCeECHHHHHHHHHcCC
Confidence 13444543 478999999999876521 122332222 233432222 1 225699999988776544
No 116
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic. Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
Probab=98.17 E-value=1.4e-05 Score=76.50 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=45.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCC--E--EEEEEecCcccc-CCCCCCCCHHHHHHhhh-hccccceEEEc
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGD--F--LLVGIYTDQIVR-GSYHPIMHLHERSLSVL-ACRYVDEVIIG 325 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd--~--LiVgV~~D~~v~-~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~ 325 (420)
+.+..|+|||+|.||+.++++|.+..+ . .+|.+.--..-. ..+.+..+.++|+.|++ ++...+.+.+.
T Consensus 2 ~~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~~~~~k~~~~~~~~Rl~Ml~lai~~~~~~~v~ 75 (225)
T cd09286 2 VLLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVNDAYGKKGLASAKHRVAMCRLAVQSSDWIRVD 75 (225)
T ss_pred EEEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeeccCCCCCCCCCHHHHHHHHHHHHccCCCEEEE
Confidence 578899999999999999999987653 2 232221111101 13357889999999886 66666666653
No 117
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Probab=98.16 E-value=3.1e-06 Score=77.40 Aligned_cols=62 Identities=23% Similarity=0.211 Sum_probs=52.1
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-cc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CR 317 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~ 317 (420)
+++..++-|.|.|||.||+..+++|.+..|.|||+|.||..... ....++..||..|++. ++
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~vDeliI~iGSa~~~~t-~~nPfTagER~~mi~~~L~ 64 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKVDELIIVIGSAQESHT-LKNPFTAGERIPMIRDRLR 64 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhCCEEEEEEccCccccc-ccCCCCccchhHHHHHHHH
Confidence 46789999999999999999999999999999999999974432 2356788899988874 44
No 118
>KOG3351 consensus Predicted nucleotidyltransferase [General function prediction only]
Probab=98.06 E-value=4.8e-06 Score=79.30 Aligned_cols=66 Identities=33% Similarity=0.512 Sum_probs=55.4
Q ss_pred CCCCCCCeEEEEcCccccCCHHHHHHHHHHHhcC-CEEEEEEecCccccCCCC--CCCCHHHHHHhhhh
Q 014671 250 KGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVRGSYH--PIMHLHERSLSVLA 315 (420)
Q Consensus 250 ~~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g-d~LiVgV~~D~~v~~~~~--pi~~~~ER~~~v~~ 315 (420)
.++..+..++.+.|+||=+|.||-=+|..|..++ |.|||||+.|+...++.. -+-|.++|.+.|..
T Consensus 136 ~~~a~~~~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~kK~~~Eliepie~R~~~V~~ 204 (293)
T KOG3351|consen 136 SGPANKFMVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKKKVLKELIEPIEERKEHVSN 204 (293)
T ss_pred ccchhcceeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHHhHHHHHhhhHHHHHHHHHH
Confidence 4455566789999999999999999999999997 899999999998876322 68899999976644
No 119
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=98.05 E-value=1.8e-05 Score=71.65 Aligned_cols=97 Identities=25% Similarity=0.252 Sum_probs=62.2
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcC---CEEEEEEecC--c--cccC-CCC-CCCCHHHHHHhhhhccccceEEEc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLG---DFLLVGIYTD--Q--IVRG-SYH-PIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g---d~LiVgV~~D--~--~v~~-~~~-pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
.++.|++=|.||-+|.||-.+|++|.+.+ +...+.++=| + ..+. ... .+++.+||...++++. ||.+++-
T Consensus 4 ~~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~G-vd~~~~~ 82 (157)
T PF06574_consen 4 NKKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESLG-VDYVIVI 82 (157)
T ss_dssp -S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHTT-ESEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHcC-CCEEEEe
Confidence 46789999999999999999999988776 3333333333 2 1221 222 7999999999999985 8988774
Q ss_pred CC-----CCchHHHHh-----hcCccEEEEcCCcCCC
Q 014671 326 AP-----WEVTKDMIT-----TFNICLVVHGTVSETN 352 (420)
Q Consensus 326 ~~-----~~~~~~~i~-----~~~~d~vv~G~d~~~~ 352 (420)
+. .-.+++|++ ++++..+|-|.|+...
T Consensus 83 ~F~~~~~~ls~~~Fi~~iL~~~l~~~~ivvG~DfrFG 119 (157)
T PF06574_consen 83 PFTEEFANLSPEDFIEKILKEKLNVKHIVVGEDFRFG 119 (157)
T ss_dssp -CCCHHCCS-HHHHHHHHCCCHCTEEEEEEETT-EES
T ss_pred cchHHHHcCCHHHHHHHHHHhcCCccEEEEccCccCC
Confidence 32 123556665 4789999999998766
No 120
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=98.04 E-value=5.4e-05 Score=69.32 Aligned_cols=122 Identities=21% Similarity=0.248 Sum_probs=84.0
Q ss_pred ccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccc---------cEEEeCCCcc--c
Q 014671 73 CFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWV---------DEVIANAPYA--I 140 (420)
Q Consensus 73 ~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~V---------D~vi~~~p~~--~ 140 (420)
+-.|+++||+.|+++|.+.+|.|.|-|.+.+ ..+++.++|++|++. ++.. |++|..+.|. |
T Consensus 7 NaNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD-------~S~Fpf~~R~~LVk~G~~~L~NV~V~~~g~YiIS~aTFPsYF 79 (182)
T PF08218_consen 7 NANPFTLGHRYLIEQAAKECDWLHVFVVSED-------RSLFPFADRYELVKEGTADLPNVTVHPGGDYIISSATFPSYF 79 (182)
T ss_pred cCCCCccHHHHHHHHHHHhCCEEEEEEEccc-------cCcCCHHHHHHHHHHHhCcCCCEEEEcCCCeeeecccChhhh
Confidence 5689999999999999999999888777654 478999999999985 2222 3334333221 0
Q ss_pred c-H--------------HHHHHHHhhcCccEEEEcCCCCCCCCCccHHH-----HHHhC-CeEEEeccCC----CCChHH
Q 014671 141 T-E--------------QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-----LAKKV-GRYKQIKRTE----GVSSTD 195 (420)
Q Consensus 141 ~-~--------------~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~-----~lk~~-g~~~~v~r~~----~ISST~ 195 (420)
. + -|.+.+...+++..-.+|+.+.... ...|. +|... -++++++|.+ .||.|.
T Consensus 80 lK~~~~~~~~~~~lD~~iF~~~IAp~L~It~RfVG~EP~~~v--T~~YN~~M~~~Lp~~gi~v~ei~R~~~~g~~ISAS~ 157 (182)
T PF08218_consen 80 LKDEDDVIKAQAELDATIFKKYIAPALGITKRFVGEEPFSPV--TRIYNEAMKEILPPYGIEVVEIPRKEINGEPISASR 157 (182)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhHhcCcccceeCCCCCCHH--HHHHHHHHHHhccccCCEEEEEecccCCCcEEcHHH
Confidence 0 0 2333355678999999999875422 22232 33334 3678899854 499999
Q ss_pred HHHHHHhc
Q 014671 196 IVGRILSS 203 (420)
Q Consensus 196 Ir~rI~~~ 203 (420)
+|+.|.++
T Consensus 158 VR~~l~~~ 165 (182)
T PF08218_consen 158 VRKLLKEG 165 (182)
T ss_pred HHHHHHcC
Confidence 99999865
No 121
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Probab=97.99 E-value=8.5e-05 Score=74.05 Aligned_cols=135 Identities=19% Similarity=0.224 Sum_probs=87.1
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCC--EE-EEEEecCccccC--CCC----CCCCHHHHHHhhhhccccceEEEcC
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGD--FL-LVGIYTDQIVRG--SYH----PIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd--~L-iVgV~~D~~v~~--~~~----pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
...|++-|.||-+|.||-.+|++|++.+. .+ .+.++-++--.+ .+. -++++++|.+.+..+. ||.+++..
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~g-vd~~~v~~ 93 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGYG-VDALVVLD 93 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhcC-CcEEEEEe
Confidence 46799999999999999999999886542 12 333333332222 111 3899999999999997 89888843
Q ss_pred CC-----CchHHHHh----hcCccEEEEcCCcCCCCCCCCCCChHHHHHhCC---e-EEEeCCC----CCCCHHHHHHHH
Q 014671 327 PW-----EVTKDMIT----TFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG---I-FQLLESP----KSITTTSVAQRI 389 (420)
Q Consensus 327 ~~-----~~~~~~i~----~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G---~-~~~~~~~----~~~Stt~Ii~RI 389 (420)
.. -...+|++ .++++.+|-|.|+....- ...+ ...++..| . ...++.. ..+|||.|.+-+
T Consensus 94 F~~~fa~ls~~~Fv~~lv~~l~~k~ivvG~DF~FGk~--~~g~-~~~L~~~~~~gf~v~~v~~~~~~~~~iSSt~IR~~L 170 (304)
T COG0196 94 FDLEFANLSAEEFVELLVEKLNVKHIVVGFDFRFGKG--RQGN-AELLRELGQKGFEVTIVPKINEEGIRISSTAIRQAL 170 (304)
T ss_pred CCHhHhhCCHHHHHHHHHhccCCcEEEEecccccCCC--CCCC-HHHHHHhccCCceEEEeccEecCCcEEchHHHHHHH
Confidence 32 13445555 889999999999876531 1112 23333333 2 3333322 249999998876
Q ss_pred HhchH
Q 014671 390 IANHE 394 (420)
Q Consensus 390 ~~~~~ 394 (420)
.+..-
T Consensus 171 ~~gdl 175 (304)
T COG0196 171 REGDL 175 (304)
T ss_pred hcCCH
Confidence 55443
No 122
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=97.83 E-value=4e-05 Score=75.65 Aligned_cols=65 Identities=29% Similarity=0.280 Sum_probs=53.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
--|.+.|+ +|.||+.||++|++.++.++|.+..+|.-... .. +.+++.++|.++++.+ +||.++.
T Consensus 25 g~VpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~ 92 (282)
T TIGR00018 25 GFVPTMGN---LHDGHMSLIDRAVAENDVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL-GVDVVFA 92 (282)
T ss_pred EEEECCCc---ccHHHHHHHHHHHHhCCeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc-CCCEEEC
Confidence 35679999 99999999999999999888888877753221 22 4588999999999997 8999986
No 123
>PLN02660 pantoate--beta-alanine ligase
Probab=97.75 E-value=6.5e-05 Score=74.11 Aligned_cols=65 Identities=26% Similarity=0.305 Sum_probs=53.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
--|.+.|. +|.||+.||++|++.++.++|.+..+|.-... .. +.+.|.++|+++++.+ +||.++.
T Consensus 24 gfVpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~ 91 (284)
T PLN02660 24 ALVPTMGY---LHEGHLSLVRAARARADVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAAL-GVDAVFN 91 (284)
T ss_pred EEEEcCch---hhHHHHHHHHHHHHhCCEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHc-CCCEEEC
Confidence 45788999 99999999999999999888888877754221 22 4688999999999997 8999986
No 124
>PRK13670 hypothetical protein; Provisional
Probab=97.71 E-value=6.4e-05 Score=77.57 Aligned_cols=87 Identities=20% Similarity=0.272 Sum_probs=64.0
Q ss_pred EcCccccCCHHHHHHHHHHHhcCC-EEEEEEecCccccCCCCCCCCHHHHHHhhhhccccceEEEcCCC---CchHH---
Q 014671 261 IDGAFDLFHAGHVEILKKARQLGD-FLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW---EVTKD--- 333 (420)
Q Consensus 261 ~~G~FDl~H~GHi~~L~~Ak~~gd-~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~---~~~~~--- 333 (420)
+---||+||.||..+|++|++... .++++|-+-..+.+|..++++..+|+++++.+. ||.|+.-+.. ....+
T Consensus 6 IIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~G-vD~vielpf~~a~~sae~F~~ 84 (388)
T PRK13670 6 IIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENG-VDLVVELPFLYSVQSADFFAE 84 (388)
T ss_pred EEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcC-CCEEEEeCCchHhCCHHHHHH
Confidence 334599999999999999998642 355555566666664446999999999999985 8999885431 12233
Q ss_pred ----HHhhcCccEEEEcCC
Q 014671 334 ----MITTFNICLVVHGTV 348 (420)
Q Consensus 334 ----~i~~~~~d~vv~G~d 348 (420)
++..++++.+|.|.|
T Consensus 85 ~aV~iL~~l~v~~lv~G~e 103 (388)
T PRK13670 85 GAVSILDALGVDSLVFGSE 103 (388)
T ss_pred hHHHHHHHcCCCEEEEcCC
Confidence 345588999999988
No 125
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.62 E-value=0.0011 Score=65.16 Aligned_cols=138 Identities=19% Similarity=0.168 Sum_probs=92.5
Q ss_pred ccCCCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc----------ccc
Q 014671 59 KCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG----------LKW 128 (420)
Q Consensus 59 ~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~----------~~~ 128 (420)
+.+...++++-+.-+-.|+.+||+.|++||.+.||.|.+-+.+++ ...++.++|.+|++. ..+
T Consensus 139 k~r~~gkkIgaIVMNANPFTLGH~YLVEqAaaqcDwlHLFvV~eD-------~S~f~y~~R~~Lv~~G~~~l~Nvt~Hsg 211 (352)
T COG3053 139 KLRHPGKKIGAIVMNANPFTLGHRYLVEQAAAQCDWLHLFVVKED-------SSLFPYEDRLDLVKKGTADLPNVTVHSG 211 (352)
T ss_pred HhccCCCeeEEEEEeCCCccchhHHHHHHHHhhCCEEEEEEEecc-------cccCCHHHHHHHHHHhhccCCceEEecC
Confidence 334445677888889999999999999999999998876666544 367999999999974 224
Q ss_pred ccEEEeCCCcc--cc-H--------------HHHHHHHhhcCccEEEEcCCCCCCCCCc---cHHHHHHhCC------eE
Q 014671 129 VDEVIANAPYA--IT-E--------------QFMNRLFNEHKIDYIIHGDDPCLLPDGT---DAYALAKKVG------RY 182 (420)
Q Consensus 129 VD~vi~~~p~~--~~-~--------------~fl~~ll~~~~~d~vV~G~D~~~g~~g~---~~~~~lk~~g------~~ 182 (420)
-|++|..+.|. |- + -|-+.+...+++..-.+|..+..-.-.. .--.+|.+.+ ++
T Consensus 212 sdYiISrATFP~YFiKeq~vv~~s~t~iDl~iFr~~iA~aLgIThRfVG~EP~c~vT~~YNq~M~~~L~~~~~~~p~I~v 291 (352)
T COG3053 212 SDYIISRATFPAYFIKEQSVVNDSQTEIDLKIFRKYIAPALGITHRFVGTEPFCRVTAIYNQQMRYWLEDPTISAPPIEV 291 (352)
T ss_pred CCeEEEecccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCcceeeecCCCCcHHHHHHHHHHHHHHhccCCCCCceEE
Confidence 56666554442 11 0 1222244568899999998874321110 1122444433 36
Q ss_pred EEeccC----CCCChHHHHHHHHhc
Q 014671 183 KQIKRT----EGVSSTDIVGRILSS 203 (420)
Q Consensus 183 ~~v~r~----~~ISST~Ir~rI~~~ 203 (420)
++++|. ..||.|.+|+.+.+.
T Consensus 292 vei~Rk~~~~~~ISAS~VR~~l~~~ 316 (352)
T COG3053 292 VEIERKKYQEMPISASRVRQLLAKN 316 (352)
T ss_pred EEeehhhhcCCcccHHHHHHHHHhC
Confidence 777774 369999999998853
No 126
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function.; PDB: 3GMI_A.
Probab=97.52 E-value=0.00015 Score=74.88 Aligned_cols=88 Identities=26% Similarity=0.437 Sum_probs=38.2
Q ss_pred EecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhccccccEEEeCCCcccc----H
Q 014671 70 MDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAIT----E 142 (420)
Q Consensus 70 ~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~----~ 142 (420)
++-=|+|+|.||...|++|++.. |. +|+|-|-..+ ..| |.+++--.|.++.-.+ ++|.|++ -|+.+. +
T Consensus 6 IIaEYNPFHnGH~y~i~~~k~~~~ad~-ii~vMSGnFv--QRGEPAi~dKw~RA~~AL~~-GaDLViE-LP~~~a~qsA~ 80 (388)
T PF05636_consen 6 IIAEYNPFHNGHLYQIEQAKKITGADV-IIAVMSGNFV--QRGEPAIIDKWTRAEMALKN-GADLVIE-LPVVYALQSAE 80 (388)
T ss_dssp -E---TT--HHHHHHHHHHH---TSSE-EEEEE--TTS--BTSSB-SS-HHHHHHHHHHH-T-SEEEE----G-------
T ss_pred eEEeECCccHHHHHHHHHHhccCCCCE-EEEEECCCcc--cCCCeeeCCHHHHHHHHHHc-CCCEEEE-CCCcccccccc
Confidence 34458999999999999999864 65 5556565544 345 7799999999997765 8999998 455443 2
Q ss_pred HHH---HHHHhhcCccEEEEcCC
Q 014671 143 QFM---NRLFNEHKIDYIIHGDD 162 (420)
Q Consensus 143 ~fl---~~ll~~~~~d~vV~G~D 162 (420)
.|- -.++..+++|.++.|..
T Consensus 81 ~FA~gaV~lL~~lgvd~l~FGsE 103 (388)
T PF05636_consen 81 YFARGAVSLLNALGVDYLSFGSE 103 (388)
T ss_dssp -----------------------
T ss_pred ccccccccccccccccccccccc
Confidence 343 23778889999998865
No 127
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Probab=97.47 E-value=0.00027 Score=71.73 Aligned_cols=86 Identities=24% Similarity=0.297 Sum_probs=62.1
Q ss_pred cccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhccccccEEEeCCCccccH---H-H
Q 014671 72 GCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAITE---Q-F 144 (420)
Q Consensus 72 G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~---~-f 144 (420)
--||++|.||+.+|++|+++. |..++++..| .. ..+ +++.+-.+|.++.-+. ++|.|++ -|+.++. + |
T Consensus 8 ~eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgd-f~--qRgepai~~k~~r~~~aL~~-g~D~VIe-lP~~~s~q~a~~f 82 (358)
T COG1323 8 AEYNPFHNGHQYHINKAREEFKGDEIIAVMSGD-FT--QRGEPAIGHKWERKKMALEG-GADLVIE-LPLERSGQGAPYF 82 (358)
T ss_pred eecCcccccHHHHHHHHHHhccCCceEEeeecc-hh--hcCCCccccHHHHHhhhhhc-CceEEEE-cceEEecCCCchh
Confidence 359999999999999999853 6555555444 33 234 7899999999999885 8999998 5554442 2 2
Q ss_pred H---HHHHhhcCccEEEEcCC
Q 014671 145 M---NRLFNEHKIDYIIHGDD 162 (420)
Q Consensus 145 l---~~ll~~~~~d~vV~G~D 162 (420)
. ..++..+++|.|+.|..
T Consensus 83 a~~av~il~~l~~~~i~fgse 103 (358)
T COG1323 83 ATRAVRILNALGGDDIAFGSP 103 (358)
T ss_pred hHHHHHHHHhcCCCeEEEeCC
Confidence 2 12556788888888754
No 128
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Probab=97.37 E-value=0.00053 Score=66.14 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=46.1
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcC--C-EEEEEEecCccccC-CCCCCCCHHHHHHhhh-hccccceEEE
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLG--D-FLLVGIYTDQIVRG-SYHPIMHLHERSLSVL-ACRYVDEVII 324 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d-~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~-~~~~VD~Vvi 324 (420)
+...+.+..|+|||+|.||+.+.+.|++.- | ..+|++.--..-.. .+....+.++|+.|++ ++..-..+-+
T Consensus 20 ~~~~v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k~~~~~~~~Rl~Ml~lai~~~~~~~V 95 (236)
T PLN02945 20 RTRVVLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKKKGLASAEHRIQMCQLACEDSDFIMV 95 (236)
T ss_pred CceEEEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccccCCCCCHHHHHHHHHHHhcCCCCeEe
Confidence 345677888899999999999999888643 3 33444332221111 2236779999999985 5555444443
No 129
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Probab=97.21 E-value=0.00075 Score=68.61 Aligned_cols=83 Identities=23% Similarity=0.271 Sum_probs=62.5
Q ss_pred ccccCCHHHHHHHHHHHh-c-CCEEEEEEecCccccCCCCCCCCHHHHHHhhhhccccceEEEcCC--------CC--ch
Q 014671 264 AFDLFHAGHVEILKKARQ-L-GDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDEVIIGAP--------WE--VT 331 (420)
Q Consensus 264 ~FDl~H~GHi~~L~~Ak~-~-gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~--------~~--~~ 331 (420)
-||+||.||.-+|++|++ . +|..++++..| .+++|..++++-.+|..+.+++. +|.||..+- +- -.
T Consensus 9 eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgd-f~qRgepai~~k~~r~~~aL~~g-~D~VIelP~~~s~q~a~~fa~~a 86 (358)
T COG1323 9 EYNPFHNGHQYHINKAREEFKGDEIIAVMSGD-FTQRGEPAIGHKWERKKMALEGG-ADLVIELPLERSGQGAPYFATRA 86 (358)
T ss_pred ecCcccccHHHHHHHHHHhccCCceEEeeecc-hhhcCCCccccHHHHHhhhhhcC-ceEEEEcceEEecCCCchhhHHH
Confidence 499999999999999997 3 45555555555 67777779999999999999885 798888432 11 13
Q ss_pred HHHHhhcCccEEEEcCC
Q 014671 332 KDMITTFNICLVVHGTV 348 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d 348 (420)
...+..+++|.++.|..
T Consensus 87 v~il~~l~~~~i~fgse 103 (358)
T COG1323 87 VRILNALGGDDIAFGSP 103 (358)
T ss_pred HHHHHhcCCCeEEEeCC
Confidence 34667778888888864
No 130
>TIGR00339 sopT ATP sulphurylase. Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
Probab=97.10 E-value=0.0041 Score=64.19 Aligned_cols=95 Identities=19% Similarity=0.162 Sum_probs=64.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHh--CCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccc-c---cEE-EeCCC
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW-V---DEV-IANAP 137 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~l--gd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~-V---D~v-i~~~p 137 (420)
-++|++.=+||++|.||..++++|.+. +|.|++.+.--+ .| +-.++.+-|+++++.+.- . +.+ +.-.|
T Consensus 183 w~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g~----~k-~~~~~~~~R~~~~~~~~~~~~~~~~~~l~~~~ 257 (383)
T TIGR00339 183 WDTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVGL----TK-PGDIPAEVRMRAYEVLKEGYPNPERVMLTFLP 257 (383)
T ss_pred CCeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCC----CC-CCCCCHHHHHHHHHHHHhhCCCCCceEEEecc
Confidence 357888999999999999999999997 687766655432 23 367899999999986311 1 111 21123
Q ss_pred cccc----HHHHHH--HHhhcCccEEEEcCCCC
Q 014671 138 YAIT----EQFMNR--LFNEHKIDYIIHGDDPC 164 (420)
Q Consensus 138 ~~~~----~~fl~~--ll~~~~~d~vV~G~D~~ 164 (420)
+.+. .+.+.. +.+.|+|.++++|.|..
T Consensus 258 ~em~~agpreall~Aiir~nyG~th~IiG~Dha 290 (383)
T TIGR00339 258 LAMRYAGPREAIWHAIIRKNYGATHFIVGRDHA 290 (383)
T ss_pred hHhhcCCcHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 3221 244544 44679999999998863
No 131
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function.; PDB: 3GMI_A.
Probab=96.92 E-value=0.0014 Score=67.71 Aligned_cols=86 Identities=17% Similarity=0.332 Sum_probs=42.0
Q ss_pred CccccCCHHHHHHHHHHHhc-CCEEEEEEecCccccCCCCCCCCHHHHHHhhhhccccceEEEcCC-CC---------ch
Q 014671 263 GAFDLFHAGHVEILKKARQL-GDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDEVIIGAP-WE---------VT 331 (420)
Q Consensus 263 G~FDl~H~GHi~~L~~Ak~~-gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~-~~---------~~ 331 (420)
--|.|||.||.-+|++||+. +.-.||+|-|-.++.+|..-+++--.|+++.+.+. ||-|+--+- +. -.
T Consensus 8 aEYNPFHnGH~y~i~~~k~~~~ad~ii~vMSGnFvQRGEPAi~dKw~RA~~AL~~G-aDLViELP~~~a~qsA~~FA~ga 86 (388)
T PF05636_consen 8 AEYNPFHNGHLYQIEQAKKITGADVIIAVMSGNFVQRGEPAIIDKWTRAEMALKNG-ADLVIELPVVYALQSAEYFARGA 86 (388)
T ss_dssp ---TT--HHHHHHHHHHH---TSSEEEEEE--TTSBTSSB-SS-HHHHHHHHHHHT--SEEEE---G-------------
T ss_pred EeECCccHHHHHHHHHHhccCCCCEEEEEECCCcccCCCeeeCCHHHHHHHHHHcC-CCEEEECCCcccccccccccccc
Confidence 34899999999999999975 43356678888899988779999999999988885 898876211 11 13
Q ss_pred HHHHhhcCccEEEEcCCc
Q 014671 332 KDMITTFNICLVVHGTVS 349 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~ 349 (420)
..++..+++|.++-|.+.
T Consensus 87 V~lL~~lgvd~l~FGsE~ 104 (388)
T PF05636_consen 87 VSLLNALGVDYLSFGSES 104 (388)
T ss_dssp ------------------
T ss_pred cccccccccccccccccc
Confidence 457888889999999764
No 132
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
Probab=96.75 E-value=0.017 Score=53.23 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=47.3
Q ss_pred cccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEc
Q 014671 265 FDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 325 (420)
Q Consensus 265 FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~ 325 (420)
-.||+.||.-++++|.+.+|.|.|=|-+++ ...|+..+|..+|+. ++..++|++-
T Consensus 8 aNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD------~S~Fpf~~R~~LVk~G~~~L~NV~V~ 63 (182)
T PF08218_consen 8 ANPFTLGHRYLIEQAAKECDWLHVFVVSED------RSLFPFADRYELVKEGTADLPNVTVH 63 (182)
T ss_pred CCCCccHHHHHHHHHHHhCCEEEEEEEccc------cCcCCHHHHHHHHHHHhCcCCCEEEE
Confidence 468999999999999999999988887765 479999999988854 7888888874
No 133
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=95.92 E-value=0.015 Score=57.51 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=52.5
Q ss_pred CCeEEE--EcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC---C-CCCCCCHHHHHHhhhhccccceEEEcC
Q 014671 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG---S-YHPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 255 ~~~iV~--~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~---~-~~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
+++|++ +-|. +|.||..++++|++.+|.+||.+..++.--. . ..-+++++++.+.++++ .||.++.++
T Consensus 21 g~~ig~VpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~P~ 94 (282)
T TIGR00018 21 GKTVGFVPTMGN---LHDGHMSLIDRAVAENDVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL-GVDVVFAPS 94 (282)
T ss_pred CCeEEEEECCCc---ccHHHHHHHHHHHHhCCeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc-CCCEEECCC
Confidence 455544 6677 9999999999999999999999987764422 1 12578999999998887 488887754
No 134
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=95.87 E-value=0.018 Score=56.85 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhh-hhccccceEEEc
Q 014671 252 PGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSV-LACRYVDEVIIG 325 (420)
Q Consensus 252 ~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v-~~~~~VD~Vvi~ 325 (420)
+.+++||.-+-..-.||+.||--+++||.+.||.|-+=|-+++ ...++.++|..+| +.+++.+.|.+-
T Consensus 141 r~~gkkIgaIVMNANPFTLGH~YLVEqAaaqcDwlHLFvV~eD------~S~f~y~~R~~Lv~~G~~~l~Nvt~H 209 (352)
T COG3053 141 RHPGKKIGAIVMNANPFTLGHRYLVEQAAAQCDWLHLFVVKED------SSLFPYEDRLDLVKKGTADLPNVTVH 209 (352)
T ss_pred ccCCCeeEEEEEeCCCccchhHHHHHHHHhhCCEEEEEEEecc------cccCCHHHHHHHHHHhhccCCceEEe
Confidence 3457899988899999999999999999999999877776664 4689999999655 567888888773
No 135
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Probab=95.75 E-value=0.031 Score=55.44 Aligned_cols=70 Identities=21% Similarity=0.342 Sum_probs=53.3
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-C---CCCCCCHHHHHHhhhhccccceEEEcC
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-S---YHPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~---~~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
+++|+++. +.--+|.||..++++|++.++.++|.+..++.--. + ..-++++++|...++++. ||.+++..
T Consensus 21 ~~~i~~v~-tmG~lH~GH~~Li~~a~~~a~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~G-vD~v~~p~ 94 (281)
T PRK00380 21 GKRIGLVP-TMGALHEGHLSLVREARAEADIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAAG-VDLVFAPS 94 (281)
T ss_pred CCeEEEEE-ccCceeHHHHHHHHHHHHhCCEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHcC-CCEEEeCC
Confidence 56676665 55559999999999999999999999887754322 1 125778999999988874 88888753
No 136
>PLN02660 pantoate--beta-alanine ligase
Probab=95.60 E-value=0.031 Score=55.41 Aligned_cols=68 Identities=24% Similarity=0.277 Sum_probs=52.1
Q ss_pred CCeE--EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC---C-CCCCCCHHHHHHhhhhccccceEEEcC
Q 014671 255 NARV--VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG---S-YHPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 255 ~~~i--V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~---~-~~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
+++| |.+=|. +|.||..++++|++.+|.++|.+..++.--. . ...++++++|...++++. ||.|+.++
T Consensus 20 g~~igfVpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~G-VD~vf~P~ 93 (284)
T PLN02660 20 GKRIALVPTMGY---LHEGHLSLVRAARARADVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAALG-VDAVFNPH 93 (284)
T ss_pred CCeEEEEEcCch---hhHHHHHHHHHHHHhCCEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHcC-CCEEECCC
Confidence 3454 445566 9999999999999999999999987765422 1 225789999999888874 88887654
No 137
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=94.96 E-value=0.068 Score=52.87 Aligned_cols=66 Identities=24% Similarity=0.308 Sum_probs=39.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC---CCCCcHHHHHHHHhccccccEEEe
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~---~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
+-+..+.=-+|-||+.|+++|++.+|.++|.+.-+|.=..... ...-+.+.=+++++.. +||.++.
T Consensus 24 igfVPTMGaLHeGHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR~~e~D~~ll~~~-gvD~vF~ 92 (280)
T PF02569_consen 24 IGFVPTMGALHEGHLSLIRRARAENDVVVVSIFVNPTQFGPNEDFDKYPRTLERDLELLEKA-GVDAVFA 92 (280)
T ss_dssp EEEEEE-SS--HHHHHHHHHHHHHSSEEEEEE---GGGSSTTSHTTTS---HHHHHHHHHHT-T-SEEE-
T ss_pred EEEECCCchhhHHHHHHHHHHHhCCCEEEEEECcCcccCCCcchhhhCCCChHHHHHHHhcc-CCCEEEc
Confidence 4444455567999999999999999999998877764211111 3345567777888875 8998885
No 138
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Probab=94.78 E-value=0.66 Score=48.15 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=61.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccc----ccEEEe-CCCcc
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW----VDEVIA-NAPYA 139 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~----VD~vi~-~~p~~ 139 (420)
-++|++.=+-+++|.||..|++.|.+.+|.|++-.. + ..+.+-=++.+-|++-.+++.- -+.++. ..|..
T Consensus 186 w~~VvafqTrnP~HraHe~l~~~a~e~~d~lll~pl----v-G~~k~~di~~~~r~~~~~~~~~~y~p~~~v~l~~lp~~ 260 (391)
T PRK04149 186 WKTVVAFQTRNPPHRAHEYLQKCALEIVDGLLLNPL----V-GETKSGDIPAEVRMEAYEALLKNYYPKDRVLLSVTPAA 260 (391)
T ss_pred CCeEEEeecCCCCchHHHHHHHHHHHhcCeEEEecC----c-CCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccch
Confidence 457888889999999999999999999995444222 1 1122346778888888776311 122222 12221
Q ss_pred c-----cHHHHHHHH-hhcCccEEEEcCCCC
Q 014671 140 I-----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 140 ~-----~~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
. .+..+..++ +.++|..+++|.|..
T Consensus 261 mryAGPrEa~lhAivrkN~GcTh~IvGrDHA 291 (391)
T PRK04149 261 MRYAGPREAIFHAIVRKNYGCTHFIVGRDHA 291 (391)
T ss_pred hcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 134556655 459999999999863
No 139
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=94.78 E-value=0.11 Score=51.00 Aligned_cols=76 Identities=28% Similarity=0.260 Sum_probs=48.9
Q ss_pred hhcccCCCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhh-hcCC--CCCCcHHHHHHHHhccccccEE
Q 014671 56 HKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEV 132 (420)
Q Consensus 56 ~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~v 132 (420)
.+.|+++++ +|-+.=+.-.+|-||+.|+++|++.+|.++|.+.-+|.=. ++.. ...-+++.=+++++.. +||.+
T Consensus 14 ~~~~r~~gk--~Vg~VPTMG~LH~GHlsLVr~A~~~~d~VVVSIFVNP~QFg~~EDl~~YPR~l~~D~~~le~~-gvd~v 90 (285)
T COG0414 14 IKALRKEGK--RVGLVPTMGNLHEGHLSLVRRAKKENDVVVVSIFVNPLQFGPNEDLDRYPRTLERDLELLEKE-GVDIV 90 (285)
T ss_pred HHHHHHcCC--EEEEEcCCcccchHHHHHHHHHhhcCCeEEEEEEeChhhcCCchhhhhCCCCHHHHHHHHHhc-CCcEE
Confidence 345555443 5666667778999999999999999999888887766411 1111 2233444555555553 66666
Q ss_pred Ee
Q 014671 133 IA 134 (420)
Q Consensus 133 i~ 134 (420)
+.
T Consensus 91 F~ 92 (285)
T COG0414 91 FA 92 (285)
T ss_pred eC
Confidence 63
No 140
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=94.66 E-value=0.083 Score=52.29 Aligned_cols=89 Identities=19% Similarity=0.263 Sum_probs=59.7
Q ss_pred CCeEE--EEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC---C-CCCCCCHHHHHHhhhhccccceEEEcCCC
Q 014671 255 NARVV--YIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG---S-YHPIMHLHERSLSVLACRYVDEVIIGAPW 328 (420)
Q Consensus 255 ~~~iV--~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~---~-~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~ 328 (420)
+++|+ .+-|. +|.||..++++|++.+|.++|.+..++.--. . ..-+.+++++.+.++++ .||.+......
T Consensus 21 ~~~ig~V~TmG~---LH~GH~~LI~~a~~~a~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~~-GvD~vF~p~~~ 96 (277)
T cd00560 21 GKTIGFVPTMGA---LHEGHLSLVRRARAENDVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEEA-GVDLLFAPSVE 96 (277)
T ss_pred CCeEEEEECCCc---ccHHHHHHHHHHHHhCCEEEEEecCChhhcCCcccccccCCCHHHHHHHHHHC-CCCEEECCCHH
Confidence 44554 45666 9999999999999999999999988764422 1 12478899999998887 47877432211
Q ss_pred Cc-hHHHH----hhcCccEEEEcC
Q 014671 329 EV-TKDMI----TTFNICLVVHGT 347 (420)
Q Consensus 329 ~~-~~~~i----~~~~~d~vv~G~ 347 (420)
.. +.+|+ ...++..++.|.
T Consensus 97 ~m~p~~f~~~~v~~~~~~~il~G~ 120 (277)
T cd00560 97 EMYPEGLFSTFVDVGPLSEVLEGA 120 (277)
T ss_pred HcCCCCCceEEEecCCCceEEecC
Confidence 11 12222 234556667777
No 141
>cd00517 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
Probab=94.47 E-value=0.95 Score=46.40 Aligned_cols=95 Identities=18% Similarity=0.207 Sum_probs=60.6
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc--cc--cEEEe-CCC
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK--WV--DEVIA-NAP 137 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~--~V--D~vi~-~~p 137 (420)
-++|++.=+-+++|.||..+++.|.+.+ +.|++-+.- ..+.+-=++.+-|++-.+.+. +. +.++. ..|
T Consensus 156 w~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~plv-----G~~k~~d~~~~~r~~~~~~l~~~y~~~~~~~l~~lp 230 (353)
T cd00517 156 WRRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPLV-----GWTKPGDVPDEVRMRAYEALLEEYYLPERTVLAILP 230 (353)
T ss_pred CCeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEecc-----CCCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEecc
Confidence 3478888899999999999999999987 444332221 112234577788887776531 22 33332 223
Q ss_pred ccc-----cHHHHHHHH-hhcCccEEEEcCCCC
Q 014671 138 YAI-----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 138 ~~~-----~~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
... .+..+..++ +.++|.++++|.|..
T Consensus 231 ~~mryAGPrEallhAiirkN~GcThfIvGrDHA 263 (353)
T cd00517 231 LPMRYAGPREALWHAIIRKNYGATHFIVGRDHA 263 (353)
T ss_pred chhcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 221 134555555 459999999999874
No 142
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=94.39 E-value=0.54 Score=48.04 Aligned_cols=96 Identities=20% Similarity=0.163 Sum_probs=62.1
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc----ccccEEEeC-CCc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL----KWVDEVIAN-APY 138 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~----~~VD~vi~~-~p~ 138 (420)
.-++|++.=++|++|.||-.+.+.|...+|.|.|-+.-- .+.+-=++.+-|++..+.+ --=|.++.. .|+
T Consensus 182 gwk~vvafQTRNp~HraHEyl~K~Al~~vdgllv~plVG-----~tk~gD~~~e~rm~~ye~l~~~Yyp~dr~~Ls~~~~ 256 (397)
T COG2046 182 GWKTVVAFQTRNPPHRAHEYLQKRALEKVDGLLVHPLVG-----ATKPGDIPDEVRMEYYEALLKHYYPPDRVFLSVLPA 256 (397)
T ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhcCcEEEEeeec-----cccCCCchHHHHHHHHHHHHHhCCCCCcEEEEecHH
Confidence 346899999999999999999999999999654433211 1223345567777665542 113555542 222
Q ss_pred ccc-----HHHHHHHHh-hcCccEEEEcCCCC
Q 014671 139 AIT-----EQFMNRLFN-EHKIDYIIHGDDPC 164 (420)
Q Consensus 139 ~~~-----~~fl~~ll~-~~~~d~vV~G~D~~ 164 (420)
..- +.-+..+++ .++|...++|-|.+
T Consensus 257 aMRyagPrEa~~HaIIRkNyGcTHfIVGRDHA 288 (397)
T COG2046 257 AMRYAGPREALLHAIIRKNYGCTHFIVGRDHA 288 (397)
T ss_pred HhhhcCcHHHHHHHHHHhhcCCeeeeecCCCC
Confidence 211 244555664 59999999999975
No 143
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2.7.7.4 from EC) some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase, IPR002891 from INTERPRO. Both enzymes are required for PAPS (phosphoadenosine-phosphosulphate) synthesis from inorganic sulphate []. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulphate APS from ATP and inorganic sulphate [].; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0000103 sulfate assimilation; PDB: 3CR8_B 1M8P_C 1I2D_B 1JHD_A 1V47_B 1X6V_B 1XNJ_A 1XJQ_B 2QJF_A 2GKS_B ....
Probab=94.29 E-value=0.49 Score=45.15 Aligned_cols=94 Identities=19% Similarity=0.223 Sum_probs=53.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc----cccEEEe-CCCcc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK----WVDEVIA-NAPYA 139 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~----~VD~vi~-~~p~~ 139 (420)
++|++.=+-+++|.||..+++.|.+.+ |.|.+-+.-- .+.+--++.+-|++-.+.+. --+.++. ..|..
T Consensus 21 ~~VvafqtrnPlHraHe~l~~~a~e~~~~~lll~plvG-----~~k~~d~~~~~r~~~~~~~~~~y~p~~~v~l~~lp~~ 95 (215)
T PF01747_consen 21 RRVVAFQTRNPLHRAHEYLMRRALEKAGDGLLLHPLVG-----PTKPGDIPYEVRVRCYEALIDNYFPKNRVLLSPLPLP 95 (215)
T ss_dssp SSEEEEEESS---HHHHHHHHHHHHHHTSEEEEEEBES-----B-STTSCCHHHHHHHHHHHHHHCSSTTGEEEEBBESB
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHhcCcEEEEeccC-----CCCcCCCCHHHHHHHHHHHHHHhCCCCcEEEeccCch
Confidence 357777779999999999999999986 7555443221 12234567788877766521 1123332 12221
Q ss_pred --cc---HHHHHHHH-hhcCccEEEEcCCCC
Q 014671 140 --IT---EQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 140 --~~---~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
+. +.-+..++ +.++|..+++|.|..
T Consensus 96 mr~aGPrEallhAiirkN~GcTh~IvGrdhA 126 (215)
T PF01747_consen 96 MRYAGPREALLHAIIRKNYGCTHFIVGRDHA 126 (215)
T ss_dssp ---SHHHHHHHHHHHHHHTT-SEEEE-TTTT
T ss_pred hcccCcHHHHHHHHHHHHCCCceEEeCCcCC
Confidence 11 24455555 459999999999975
No 144
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism]
Probab=93.99 E-value=1.1 Score=42.38 Aligned_cols=61 Identities=21% Similarity=0.176 Sum_probs=45.7
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhC----C-eEEEEEecchhhhhcCCCCCCcHHHHHHHHhc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALG----D-ELVVGVVSDEEIIANKGPPVLSMEERLALVSG 125 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lg----d-~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~ 125 (420)
.+...++.|+|.++-.+|..+++-|+..- . +++=|+-| |.-..+|.+-+.+...|+.|++.
T Consensus 7 ~~v~l~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimS-PV~DaYkKKgLipa~hrv~~~El 72 (234)
T KOG3199|consen 7 TPVVLLACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMS-PVGDAYKKKGLIPAYHRVRMVEL 72 (234)
T ss_pred ceEEEEEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEec-ccchhhhccccchhhhHHHHHHh
Confidence 34556889999999999999999999853 2 34445544 32234666789999999999985
No 145
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Probab=93.76 E-value=0.18 Score=54.07 Aligned_cols=67 Identities=19% Similarity=0.252 Sum_probs=50.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchh-hhhcCC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE-IIANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~-i~~~K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
++-+.-+.=.+|-||+.|+++|++.+|.++|.+.-+|. ...... ...-++++=+++++.. +||.|+.
T Consensus 21 ~ig~VPTMG~LH~GHlsLi~~A~~~~d~vVvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-gvd~vf~ 90 (512)
T PRK13477 21 TIGFVPTMGALHQGHLSLIRRARQENDVVLVSIFVNPLQFGPNEDLERYPRTLEADRELCESA-GVDAIFA 90 (512)
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCchhhhhCCCCHHHHHHHHHhc-CCCEEEC
Confidence 56667788889999999999999999998888865553 111111 3455678888888886 8999885
No 146
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
Probab=92.65 E-value=0.2 Score=49.59 Aligned_cols=69 Identities=19% Similarity=0.306 Sum_probs=36.9
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
+++|.+++= -=-+|.||+.++++|++.+|.+||.|.-++.=-. +. +..-+++.=++.+++. .||.|..+
T Consensus 21 ~~~igfVPT-MGaLHeGHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR~~e~D~~ll~~~-gvD~vF~P 93 (280)
T PF02569_consen 21 GKTIGFVPT-MGALHEGHLSLIRRARAENDVVVVSIFVNPTQFGPNEDFDKYPRTLERDLELLEKA-GVDAVFAP 93 (280)
T ss_dssp TSSEEEEEE--SS--HHHHHHHHHHHHHSSEEEEEE---GGGSSTTSHTTTS---HHHHHHHHHHT-T-SEEE--
T ss_pred CCeEEEECC-CchhhHHHHHHHHHHHhCCCEEEEEECcCcccCCCcchhhhCCCChHHHHHHHhcc-CCCEEEcC
Confidence 456655541 2235999999999999999999999997764332 11 1122333334444444 58877764
No 147
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=91.50 E-value=0.36 Score=47.40 Aligned_cols=72 Identities=24% Similarity=0.379 Sum_probs=48.9
Q ss_pred CCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCC--CCCCHHHHHHhhhhccccceEEEc
Q 014671 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYH--PIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 253 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~--pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
..+++|.+++ +---+|.||+.++++|++.+|.+||.|.-+..=.. +.. .+--..+|-..++.-..||-+..+
T Consensus 19 ~~gk~Vg~VP-TMG~LH~GHlsLVr~A~~~~d~VVVSIFVNP~QFg~~EDl~~YPR~l~~D~~~le~~gvd~vF~P 93 (285)
T COG0414 19 KEGKRVGLVP-TMGNLHEGHLSLVRRAKKENDVVVVSIFVNPLQFGPNEDLDRYPRTLERDLELLEKEGVDIVFAP 93 (285)
T ss_pred HcCCEEEEEc-CCcccchHHHHHHHHHhhcCCeEEEEEEeChhhcCCchhhhhCCCCHHHHHHHHHhcCCcEEeCC
Confidence 3456777776 34468999999999999999999999998874432 111 233344555555555567766553
No 148
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Probab=90.87 E-value=0.34 Score=52.00 Aligned_cols=68 Identities=21% Similarity=0.369 Sum_probs=43.6
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEcC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
+|++++ |-=-+|.||+.++++|++.+|.+||.|..++.=.. +. .-.-++++=.+.++.. .||.|..++
T Consensus 21 ~ig~VP-TMG~LH~GHlsLi~~A~~~~d~vVvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-gvd~vf~P~ 92 (512)
T PRK13477 21 TIGFVP-TMGALHQGHLSLIRRARQENDVVLVSIFVNPLQFGPNEDLERYPRTLEADRELCESA-GVDAIFAPS 92 (512)
T ss_pred cEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCchhhhhCCCCHHHHHHHHHhc-CCCEEECCC
Confidence 555554 23348999999999999999999999987763322 10 1122334334444444 588776654
No 149
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated
Probab=90.85 E-value=2.6 Score=46.00 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=60.4
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc---cccEEEe-CCCcc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYA 139 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vi~-~~p~~ 139 (420)
+-++|+..=+-+++|.||..+++.|.+.+|.. +-+++ .+-..| +--++.+-|++-.+.+. --+.++. ..|..
T Consensus 185 gw~~v~afqtrnP~Hr~He~l~~~a~~~~d~~-lll~p--~~G~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~ 260 (568)
T PRK05537 185 GWRRVVAFQTRNPLHRAHEELTKRAAREVGAN-LLIHP--VVGMTK-PGDIDHFTRVRCYEALLDKYPPATTLLSLLPLA 260 (568)
T ss_pred CCCcEEEEecCCCCcHHHHHHHHHHHHhcCCe-EEEec--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEeccch
Confidence 34578888899999999999999999988832 23333 111111 34667788887776531 1122221 11221
Q ss_pred --c---cHHHHHHHH-hhcCccEEEEcCCCC
Q 014671 140 --I---TEQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 140 --~---~~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
+ .+..+..++ +.++|.++++|.|..
T Consensus 261 mryaGpreai~hAi~r~N~Gcth~ivGrdhA 291 (568)
T PRK05537 261 MRMAGPREALWHAIIRRNYGCTHFIVGRDHA 291 (568)
T ss_pred hcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 134555555 459999999999864
No 150
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Probab=89.97 E-value=0.78 Score=43.54 Aligned_cols=62 Identities=24% Similarity=0.299 Sum_probs=40.9
Q ss_pred cccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhh-cCC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 72 GCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 72 G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~-~K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
-+.-.+|-||..|++|+++..++.+|.+.-+|.-.. ... ...-++..-+..++++ +||.++.
T Consensus 30 PTMG~LHeGH~SLvrqs~~~~~~tVVSIfVNP~QF~pteDL~~YPrt~~~D~~~L~~L-gvdvvfa 94 (283)
T KOG3042|consen 30 PTMGCLHEGHASLVRQSVKENTYTVVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESL-GVDVVFA 94 (283)
T ss_pred cccccccccHHHHHHHHHhhCceEEEEEEechhhcCChhHhhcCCccCccHHHHHHhc-CceEEEc
Confidence 345568999999999999999988888776664211 111 1122344455667776 7777663
No 151
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=83.91 E-value=0.29 Score=51.88 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=27.1
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcC
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLG 283 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g 283 (420)
.++++++++|+||.+|.||+.||.++..-|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (470)
T PLN02341 412 LNEDDTFWAELLKNSDCSEISFLSKMAING 441 (470)
T ss_pred CCcchhHHHHhhcccccchhhhhhhhhhcc
Confidence 367899999999999999999999988766
No 152
>TIGR00339 sopT ATP sulphurylase. Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
Probab=81.49 E-value=4 Score=42.34 Aligned_cols=89 Identities=15% Similarity=0.094 Sum_probs=57.3
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhc--CCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-c-ccc--eEEE-cCCCC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-R-YVD--EVII-GAPWE 329 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~--gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~-~VD--~Vvi-~~~~~ 329 (420)
+.|+--=+||++|.||..+.+.|.+. .|.|++-..--. .+.-.++.+-|+.+++.+ . +-. .|++ ..|+.
T Consensus 184 ~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g~----~k~~~~~~~~R~~~~~~~~~~~~~~~~~~l~~~~~e 259 (383)
T TIGR00339 184 DTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVGL----TKPGDIPAEVRMRAYEVLKEGYPNPERVMLTFLPLA 259 (383)
T ss_pred CeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCC----CCCCCCCHHHHHHHHHHHHhhCCCCCceEEEecchH
Confidence 44556789999999999999999986 676555443332 223688999999888776 2 222 3322 11211
Q ss_pred -----ch---HH--HHhhcCccEEEEcCCc
Q 014671 330 -----VT---KD--MITTFNICLVVHGTVS 349 (420)
Q Consensus 330 -----~~---~~--~i~~~~~d~vv~G~d~ 349 (420)
.. .. +-+.+.+..++-|.|.
T Consensus 260 m~~agpreall~Aiir~nyG~th~IiG~Dh 289 (383)
T TIGR00339 260 MRYAGPREAIWHAIIRKNYGATHFIVGRDH 289 (383)
T ss_pred hhcCCcHHHHHHHHHHHHCCCCEEEECCCC
Confidence 11 11 3345788899999775
No 153
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Probab=78.05 E-value=3.2 Score=39.54 Aligned_cols=40 Identities=13% Similarity=0.458 Sum_probs=33.8
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~ 295 (420)
+++|.+++ +---+|.||..+.+++.++.++.+|.|..++.
T Consensus 23 g~tIgfVP-TMG~LHeGH~SLvrqs~~~~~~tVVSIfVNP~ 62 (283)
T KOG3042|consen 23 GETIGFVP-TMGCLHEGHASLVRQSVKENTYTVVSIFVNPS 62 (283)
T ss_pred CCeEEEec-ccccccccHHHHHHHHHhhCceEEEEEEechh
Confidence 56777765 34568999999999999999999999998864
No 154
>KOG3199 consensus Nicotinamide mononucleotide adenylyl transferase [Coenzyme transport and metabolism]
Probab=66.94 E-value=19 Score=34.25 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=47.1
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhc----CC-EEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEc
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQL----GD-FLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 325 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~----gd-~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~ 325 (420)
-+.+..|+|.+++.+|+++++-|+.. +. .++=|+-|--...-+++...+..-|+.++++ |+.-+.+-++
T Consensus 9 v~l~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimSPV~DaYkKKgLipa~hrv~~~ElAt~~Skwl~vD 83 (234)
T KOG3199|consen 9 VVLLACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMSPVGDAYKKKGLIPAYHRVRMVELATETSKWLMVD 83 (234)
T ss_pred EEEEEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEecccchhhhccccchhhhHHHHHHhhhccccceecc
Confidence 45567899999999999999999942 34 4555666432111144588889999977754 5555555553
No 155
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=44.12 E-value=13 Score=39.37 Aligned_cols=29 Identities=7% Similarity=0.038 Sum_probs=25.8
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhC
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALG 92 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lg 92 (420)
+.+.+++.||||.+|.||+.+|.++..-+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (470)
T PLN02341 413 NEDDTFWAELLKNSDCSEISFLSKMAING 441 (470)
T ss_pred CcchhHHHHhhcccccchhhhhhhhhhcc
Confidence 45689999999999999999999997765
No 156
>cd00517 ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
Probab=28.98 E-value=2.9e+02 Score=28.47 Aligned_cols=89 Identities=18% Similarity=0.156 Sum_probs=55.9
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcC--CEEEE-EEecCccccCCCCCCCCHHHHHHhhhhc--ccc--ceEEEcC-CC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLV-GIYTDQIVRGSYHPIMHLHERSLSVLAC--RYV--DEVIIGA-PW 328 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiV-gV~~D~~v~~~~~pi~~~~ER~~~v~~~--~~V--D~Vvi~~-~~ 328 (420)
+.|+--=+-+++|.||..+++.|.+.. |-|+| -+-.- .+.--++.+-|+...+++ .|. |.+++.. |+
T Consensus 157 ~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~plvG~-----~k~~d~~~~~r~~~~~~l~~~y~~~~~~~l~~lp~ 231 (353)
T cd00517 157 RRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPLVGW-----TKPGDVPDEVRMRAYEALLEEYYLPERTVLAILPL 231 (353)
T ss_pred CeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEeccCC-----CCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeccc
Confidence 345557789999999999999998866 43332 21111 122467888898777776 455 6665521 21
Q ss_pred C-----c----hHHHH-hhcCccEEEEcCCcC
Q 014671 329 E-----V----TKDMI-TTFNICLVVHGTVSE 350 (420)
Q Consensus 329 ~-----~----~~~~i-~~~~~d~vv~G~d~~ 350 (420)
. . ....+ +.+.+..++-|.|..
T Consensus 232 ~mryAGPrEallhAiirkN~GcThfIvGrDHA 263 (353)
T cd00517 232 PMRYAGPREALWHAIIRKNYGATHFIVGRDHA 263 (353)
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 1 11223 347899999997753
No 157
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Probab=28.01 E-value=1.5e+02 Score=30.75 Aligned_cols=93 Identities=18% Similarity=0.086 Sum_probs=58.5
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc---cc-cceEEEc-CCC-
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC---RY-VDEVIIG-APW- 328 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~---~~-VD~Vvi~-~~~- 328 (420)
+-++|...-|+++.|.||-.+.+.|....|-|+|-----+ .+.-=++.+-|++..+++ -| =|.+++. -|+
T Consensus 182 gwk~vvafQTRNp~HraHEyl~K~Al~~vdgllv~plVG~----tk~gD~~~e~rm~~ye~l~~~Yyp~dr~~Ls~~~~a 257 (397)
T COG2046 182 GWKTVVAFQTRNPPHRAHEYLQKRALEKVDGLLVHPLVGA----TKPGDIPDEVRMEYYEALLKHYYPPDRVFLSVLPAA 257 (397)
T ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhcCcEEEEeeecc----ccCCCchHHHHHHHHHHHHHhCCCCCcEEEEecHHH
Confidence 4678888999999999999999999999985433221111 222345666677666554 23 4555552 111
Q ss_pred --------CchHHHHhh-cCccEEEEcCCcCC
Q 014671 329 --------EVTKDMITT-FNICLVVHGTVSET 351 (420)
Q Consensus 329 --------~~~~~~i~~-~~~d~vv~G~d~~~ 351 (420)
.....++++ +.+.-++-|.|...
T Consensus 258 MRyagPrEa~~HaIIRkNyGcTHfIVGRDHAG 289 (397)
T COG2046 258 MRYAGPREALLHAIIRKNYGCTHFIVGRDHAG 289 (397)
T ss_pred hhhcCcHHHHHHHHHHhhcCCeeeeecCCCCC
Confidence 122234444 78888888987543
No 158
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=26.83 E-value=4.9e+02 Score=25.77 Aligned_cols=32 Identities=34% Similarity=0.579 Sum_probs=25.5
Q ss_pred eEEEEecccCc-CCHHHHHHHHHHHHhC-CeEEE
Q 014671 66 VRVYMDGCFDL-MHYGHANALRQAKALG-DELVV 97 (420)
Q Consensus 66 ~~V~~~G~FD~-lH~GH~~lL~qA~~lg-d~LiV 97 (420)
.-+...+++.+ +|+|=.+.+++|++.| |.++|
T Consensus 95 ~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGliv 128 (265)
T COG0159 95 VPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLV 128 (265)
T ss_pred CCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEe
Confidence 34677789998 5899999999999988 65543
No 159
>PRK00536 speE spermidine synthase; Provisional
Probab=25.26 E-value=82 Score=31.01 Aligned_cols=95 Identities=23% Similarity=0.147 Sum_probs=50.8
Q ss_pred hhcccCCCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhh-hcCC-CCCCcH---HHHH----HHHhcc
Q 014671 56 HKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG-PPVLSM---EERL----ALVSGL 126 (420)
Q Consensus 56 ~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~-~~K~-~pi~t~---eER~----~ll~~~ 126 (420)
+......+++++|+++|-.||- .+|+..+.-. -++.|--|+.+. ..|. -|-+.. +.|. .+.+.-
T Consensus 64 Hppl~~h~~pk~VLIiGGGDGg------~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~ 136 (262)
T PRK00536 64 HMGGCTKKELKEVLIVDGFDLE------LAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_pred HHHHhhCCCCCeEEEEcCCchH------HHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhcc
Confidence 3333445678899999999984 6677777654 466777888643 2222 222110 0111 112211
Q ss_pred -ccccEEEeCCCccccHHHHHHHHhhcCccEEEE
Q 014671 127 -KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIH 159 (420)
Q Consensus 127 -~~VD~vi~~~p~~~~~~fl~~ll~~~~~d~vV~ 159 (420)
..-|.+|.+.. ++++|.+.+.+.++++.+++
T Consensus 137 ~~~fDVIIvDs~--~~~~fy~~~~~~L~~~Gi~v 168 (262)
T PRK00536 137 IKKYDLIICLQE--PDIHKIDGLKRMLKEDGVFI 168 (262)
T ss_pred CCcCCEEEEcCC--CChHHHHHHHHhcCCCcEEE
Confidence 23566665533 34566655555566664443
No 160
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=24.93 E-value=5.6e+02 Score=25.14 Aligned_cols=116 Identities=16% Similarity=0.072 Sum_probs=64.8
Q ss_pred CHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-cccc---EEEeCCCccccHHHHHH--HHh
Q 014671 78 HYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVD---EVIANAPYAITEQFMNR--LFN 150 (420)
Q Consensus 78 H~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD---~vi~~~p~~~~~~fl~~--ll~ 150 (420)
.-+..++++...+.| +.+++.=++-+ .+.+|.+||.++++.. +.++ -|+.+... -+.+.++. ..+
T Consensus 20 ~~~l~~l~~~l~~~Gv~gi~v~GstGE-------~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~-~t~~~i~~a~~a~ 91 (289)
T cd00951 20 EDAYRAHVEWLLSYGAAALFAAGGTGE-------FFSLTPDEYAQVVRAAVEETAGRVPVLAGAGY-GTATAIAYAQAAE 91 (289)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCCcC-------cccCCHHHHHHHHHHHHHHhCCCCCEEEecCC-CHHHHHHHHHHHH
Confidence 457888888888876 54443322221 5789999999999852 1221 23444443 23443332 335
Q ss_pred hcCccEEEEcCCCCCCCCCccHHHHHHhCCe-----EEEeccCC-CCChHHHHHHHHh
Q 014671 151 EHKIDYIIHGDDPCLLPDGTDAYALAKKVGR-----YKQIKRTE-GVSSTDIVGRILS 202 (420)
Q Consensus 151 ~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~-----~~~v~r~~-~ISST~Ir~rI~~ 202 (420)
+.++|.+++-..+.+..+..+.++..+...+ +....++. .+| .++..+|.+
T Consensus 92 ~~Gad~v~~~pP~y~~~~~~~i~~~f~~v~~~~~~pi~lYn~~g~~l~-~~~l~~L~~ 148 (289)
T cd00951 92 KAGADGILLLPPYLTEAPQEGLYAHVEAVCKSTDLGVIVYNRANAVLT-ADSLARLAE 148 (289)
T ss_pred HhCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCCCC-HHHHHHHHh
Confidence 7899999998777665544444444433322 23333332 366 445555553
No 161
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=24.87 E-value=1.5e+02 Score=28.15 Aligned_cols=52 Identities=12% Similarity=0.077 Sum_probs=25.5
Q ss_pred hcCccEEEEcCCCCCCC------CCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 151 EHKIDYIIHGDDPCLLP------DGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 151 ~~~~d~vV~G~D~~~g~------~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
+.++|||..|.-|.... .|.+...++++... +++--..||+...+.+.+..+
T Consensus 122 ~~g~DYv~~GpifpT~tK~~~~~~G~~~l~~~~~~~~-iP~vAIGGi~~~nv~~v~~~G 179 (211)
T COG0352 122 ELGADYVGLGPIFPTSTKPDAPPLGLEGLREIRELVN-IPVVAIGGINLENVPEVLEAG 179 (211)
T ss_pred hcCCCEEEECCcCCCCCCCCCCccCHHHHHHHHHhCC-CCEEEEcCCCHHHHHHHHHhC
Confidence 35577777776653221 11222223333332 122223577777777776655
No 162
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional
Probab=24.67 E-value=2.1e+02 Score=29.43 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=15.0
Q ss_pred CcCCHHHHHH-HHHHHHh-CCeEEEEEec
Q 014671 75 DLMHYGHANA-LRQAKAL-GDELVVGVVS 101 (420)
Q Consensus 75 D~lH~GH~~l-L~qA~~l-gd~LiVgV~s 101 (420)
||+|+|=..+ +..|+++ +...++|++.
T Consensus 219 DGVHLgq~dl~~~~aR~llg~~~iIG~S~ 247 (347)
T PRK02615 219 DGVHLGQEDLPLAVARQLLGPEKIIGRST 247 (347)
T ss_pred CEEEeChhhcCHHHHHHhcCCCCEEEEec
Confidence 6777775544 4556653 3334556654
No 163
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=23.14 E-value=1.7e+02 Score=29.73 Aligned_cols=91 Identities=21% Similarity=0.186 Sum_probs=49.5
Q ss_pred CcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccc-------c-HHH--
Q 014671 75 DLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAI-------T-EQF-- 144 (420)
Q Consensus 75 D~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~-------~-~~f-- 144 (420)
|+-|.+... ..+|.++.+.-+|.=||...... ..+.=.+ ++.++.+..-.+|=-+.--.+|.. + .++
T Consensus 166 DlSH~s~kt-~~Dvl~~s~~PviaSHSN~~al~-~h~RNl~-D~qlkaI~~~gGvIgv~~~~~fl~~~~~~~atldd~v~ 242 (313)
T COG2355 166 DLSHLSDKT-FWDVLDLSKAPVVASHSNARALV-DHPRNLS-DEQLKAIAETGGVIGVNFIPAFLRPGGAARATLDDLVR 242 (313)
T ss_pred EecccCCcc-HHHHHhccCCceEEecCCchhcc-CCCCCCC-HHHHHHHHhcCCEEEEEeehhhccCCCCCCCCHHHHHH
Confidence 777888754 44555667767777777764321 1112223 444444444345433332122222 1 133
Q ss_pred -HHHHHhhcCccEEEEcCCCCCCCC
Q 014671 145 -MNRLFNEHKIDYIIHGDDPCLLPD 168 (420)
Q Consensus 145 -l~~ll~~~~~d~vV~G~D~~~g~~ 168 (420)
++.+.+..++|.|..|.||..+..
T Consensus 243 hI~h~v~~~G~dhVglGsDf~g~~~ 267 (313)
T COG2355 243 HIDHFVELVGIDHVGLGSDFDGGTG 267 (313)
T ss_pred HHHHHHHhcCcceeEecccccCCCC
Confidence 333556789999999999965543
No 164
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=22.30 E-value=4.9e+02 Score=25.86 Aligned_cols=40 Identities=25% Similarity=0.144 Sum_probs=29.9
Q ss_pred CCCCceEEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhh
Q 014671 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEII 106 (420)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~ 106 (420)
..+++++|+.+|--|| ..+|++.+.. .+-++.|--|+.+.
T Consensus 73 ah~~pk~VLiiGgGdG------~tlRevlkh~~ve~i~~VEID~~Vi 113 (282)
T COG0421 73 AHPNPKRVLIIGGGDG------GTLREVLKHLPVERITMVEIDPAVI 113 (282)
T ss_pred hCCCCCeEEEECCCcc------HHHHHHHhcCCcceEEEEEcCHHHH
Confidence 3345569999999998 5777777775 55678888888753
No 165
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=22.02 E-value=58 Score=32.10 Aligned_cols=57 Identities=26% Similarity=0.405 Sum_probs=40.1
Q ss_pred ccCcCC------------HHHHHHHH----HHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccc
Q 014671 73 CFDLMH------------YGHANALR----QAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWV 129 (420)
Q Consensus 73 ~FD~lH------------~GH~~lL~----qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~V 129 (420)
+||+-| -|...++. .|...| |-|++=+|+||......++.-++.++=.++++.++-+
T Consensus 187 i~DpSHsvq~pg~~~~~s~G~r~~v~~la~AAvA~GadGl~iEvHpdP~~AlsDg~q~l~~~~~~~ll~~l~~i 260 (264)
T PRK05198 187 IFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGLFIETHPDPDNALSDGPNMLPLDKLEPLLEQLKAI 260 (264)
T ss_pred EEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeCCCccccCCCccccCCHHHHHHHHHHHHHH
Confidence 489999 57777664 444444 8999999999976555556667777766666665433
No 166
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=20.82 E-value=5.6e+02 Score=22.74 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCC--Ccc-ccH----HHHHHHH
Q 014671 77 MHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANA--PYA-ITE----QFMNRLF 149 (420)
Q Consensus 77 lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~--p~~-~~~----~fl~~ll 149 (420)
++.--.+++..|++++..+.+.+...+. .+. .+.+.+. ++|+++.-. ++. ++. .-+.+++
T Consensus 13 l~~~s~el~~~A~~l~~~v~~v~~G~~~-----------~~~-~~~~~~~-Gad~v~~~~~~~~~~~~~~~~a~al~~~i 79 (168)
T cd01715 13 LRELTLEAVTAARKLGGEVTALVIGSGA-----------EAV-AAALKAY-GADKVLVAEDPALAHYLAEPYAPALVALA 79 (168)
T ss_pred hHHHHHHHHHHHHHhCCCEEEEEECCCh-----------HHH-HHHHHhc-CCCEEEEecChhhcccChHHHHHHHHHHH
Confidence 5556678999999997555555543210 111 2222232 889888521 111 121 3355566
Q ss_pred hhcCccEEEEcCCC
Q 014671 150 NEHKIDYIIHGDDP 163 (420)
Q Consensus 150 ~~~~~d~vV~G~D~ 163 (420)
++.+|++|+.|...
T Consensus 80 ~~~~p~~Vl~~~t~ 93 (168)
T cd01715 80 KKEKPSHILAGATS 93 (168)
T ss_pred HhcCCCEEEECCCc
Confidence 77889999999875
No 167
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=20.51 E-value=60 Score=32.27 Aligned_cols=62 Identities=24% Similarity=0.457 Sum_probs=44.4
Q ss_pred ccCcCCH------------HHHHHH----HHHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEe
Q 014671 73 CFDLMHY------------GHANAL----RQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 73 ~FD~lH~------------GH~~lL----~qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
+||+-|. |...++ +.|...| |-|.+=+|+||......++.-+++++=.++++.++-++.++.
T Consensus 195 i~DpSHsvq~p~~~g~~s~G~re~v~~larAAvA~GaDGl~iEvHpdP~~AlsDg~q~l~~~~~~~l~~~l~~i~~~~~ 273 (281)
T PRK12457 195 IFDVTHSLQCRDPLGAASGGRRRQVLDLARAGMAVGLAGLFLEAHPDPDRARCDGPSALPLDQLEPFLSQVKALDDLVK 273 (281)
T ss_pred EEeCCccccCCCCCCCCCCCCHHHHHHHHHHHHHhCCCEEEEEecCCccccCCCcccccCHHHHHHHHHHHHHHHHHHc
Confidence 4899994 666655 4455554 999999999998766666777788877777777655554443
No 168
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Probab=20.08 E-value=2.7e+02 Score=29.11 Aligned_cols=91 Identities=18% Similarity=0.149 Sum_probs=56.5
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-c-c--cceEEEc-CCC--
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-R-Y--VDEVIIG-APW-- 328 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~-~--VD~Vvi~-~~~-- 328 (420)
-+.|+.-=+-+++|.||..+.+.|.+.+|-|++- ..+-..+.--++.+-|+...+++ + | -+.|++. -|+
T Consensus 186 w~~VvafqTrnP~HraHe~l~~~a~e~~d~lll~----plvG~~k~~di~~~~r~~~~~~~~~~y~p~~~v~l~~lp~~m 261 (391)
T PRK04149 186 WKTVVAFQTRNPPHRAHEYLQKCALEIVDGLLLN----PLVGETKSGDIPAEVRMEAYEALLKNYYPKDRVLLSVTPAAM 261 (391)
T ss_pred CCeEEEeecCCCCchHHHHHHHHHHHhcCeEEEe----cCcCCCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccchh
Confidence 3456667789999999999999999999955541 11111222467888898777776 2 2 2333331 111
Q ss_pred ---Cc----hHHHH-hhcCccEEEEcCCcC
Q 014671 329 ---EV----TKDMI-TTFNICLVVHGTVSE 350 (420)
Q Consensus 329 ---~~----~~~~i-~~~~~d~vv~G~d~~ 350 (420)
+. ....+ +.+.+..++-|.|..
T Consensus 262 ryAGPrEa~lhAivrkN~GcTh~IvGrDHA 291 (391)
T PRK04149 262 RYAGPREAIFHAIVRKNYGCTHFIVGRDHA 291 (391)
T ss_pred cccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 11 11223 448899999998753
Done!