Query 014671
Match_columns 420
No_of_seqs 384 out of 3187
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 15:46:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 8.8E-72 3E-76 557.8 31.3 328 63-396 5-341 (341)
2 3hl4_A Choline-phosphate cytid 100.0 3.2E-34 1.1E-38 271.1 14.2 153 251-406 71-226 (236)
3 3hl4_A Choline-phosphate cytid 100.0 4.5E-30 1.5E-34 242.8 16.9 142 60-205 71-214 (236)
4 3elb_A Ethanolamine-phosphate 99.9 6.1E-28 2.1E-32 241.1 14.4 136 255-393 6-142 (341)
5 2b7l_A Glycerol-3-phosphate cy 99.9 1.7E-23 5.7E-28 181.6 11.7 129 65-203 1-129 (132)
6 1coz_A Protein (glycerol-3-pho 99.9 2.3E-23 7.9E-28 179.9 11.3 128 65-202 1-128 (129)
7 3glv_A Lipopolysaccharide core 99.9 2.3E-22 7.9E-27 177.4 12.0 135 65-206 2-141 (143)
8 3op1_A Macrolide-efflux protei 99.8 1.3E-20 4.5E-25 185.7 12.5 136 65-203 20-177 (308)
9 1coz_A Protein (glycerol-3-pho 99.8 3.2E-20 1.1E-24 160.1 11.0 126 256-390 1-127 (129)
10 2b7l_A Glycerol-3-phosphate cy 99.8 2.5E-20 8.7E-25 161.5 10.1 128 256-392 1-129 (132)
11 1mrz_A Riboflavin kinase/FMN a 99.8 2.3E-19 8E-24 176.0 12.1 130 68-203 2-147 (293)
12 3glv_A Lipopolysaccharide core 99.8 9.6E-20 3.3E-24 160.6 6.9 133 256-394 2-140 (143)
13 2x0k_A Riboflavin biosynthesis 99.8 4.7E-19 1.6E-23 177.1 10.3 136 66-203 16-174 (338)
14 3nv7_A Phosphopantetheine aden 99.8 4.7E-19 1.6E-23 158.9 5.7 127 256-392 2-139 (157)
15 3k9w_A Phosphopantetheine aden 99.7 1.8E-18 6E-23 159.3 8.7 132 63-203 20-159 (187)
16 1qjc_A Phosphopantetheine aden 99.7 1.4E-17 4.8E-22 147.9 10.2 129 66-203 2-138 (158)
17 4f3r_A Phosphopantetheine aden 99.7 4.4E-18 1.5E-22 153.3 6.7 128 256-393 5-142 (162)
18 1o6b_A Phosphopantetheine aden 99.7 3E-17 1E-21 147.9 10.7 129 66-203 3-139 (169)
19 2qtr_A Nicotinate (nicotinamid 99.7 9.5E-18 3.2E-22 153.5 6.0 133 66-203 3-166 (189)
20 3nv7_A Phosphopantetheine aden 99.7 4.5E-18 1.5E-22 152.5 3.6 129 65-203 2-139 (157)
21 1kam_A Deamido-NAD(+), nicotin 99.7 2.2E-16 7.7E-21 145.5 15.0 133 66-203 8-171 (194)
22 3k9w_A Phosphopantetheine aden 99.7 4.2E-17 1.4E-21 150.2 9.1 132 256-393 22-160 (187)
23 4f3r_A Phosphopantetheine aden 99.7 2.1E-17 7.1E-22 148.9 6.5 130 65-203 5-141 (162)
24 3nd5_A Phosphopantetheine aden 99.7 1.3E-16 4.4E-21 144.9 8.2 132 256-393 2-141 (171)
25 1od6_A PPAT, phosphopantethein 99.6 7.5E-16 2.6E-20 137.1 12.4 122 68-203 3-139 (160)
26 3nbk_A Phosphopantetheine aden 99.6 1.3E-15 4.4E-20 138.8 13.1 135 253-393 18-158 (177)
27 3f3m_A Phosphopantetheine aden 99.6 7.3E-16 2.5E-20 139.6 9.9 133 256-394 3-142 (168)
28 3f3m_A Phosphopantetheine aden 99.6 5.4E-16 1.9E-20 140.4 8.8 129 65-203 3-140 (168)
29 1vlh_A Phosphopantetheine aden 99.6 9.5E-16 3.3E-20 139.3 10.0 129 257-393 13-150 (173)
30 1k4m_A NAMN adenylyltransferas 99.6 6.5E-16 2.2E-20 144.5 8.8 92 68-163 6-110 (213)
31 3nbk_A Phosphopantetheine aden 99.6 1.7E-15 5.9E-20 138.0 9.9 132 62-203 18-157 (177)
32 3nd5_A Phosphopantetheine aden 99.6 8E-16 2.7E-20 139.7 6.5 124 65-203 2-140 (171)
33 1vlh_A Phosphopantetheine aden 99.5 8.4E-15 2.9E-19 133.0 8.7 126 66-203 13-149 (173)
34 1qjc_A Phosphopantetheine aden 99.5 1.6E-14 5.4E-19 128.1 10.2 131 256-393 1-139 (158)
35 1yum_A 'probable nicotinate-nu 99.5 1.3E-14 4.3E-19 138.7 10.1 94 65-162 23-129 (242)
36 2h29_A Probable nicotinate-nuc 99.5 1.5E-14 5.1E-19 132.7 9.7 134 66-203 3-166 (189)
37 3h05_A Uncharacterized protein 99.5 3.6E-14 1.2E-18 129.4 8.2 134 65-203 2-149 (177)
38 1o6b_A Phosphopantetheine aden 99.5 1.6E-13 5.5E-18 123.4 10.7 131 256-392 2-139 (169)
39 2qjo_A Bifunctional NMN adenyl 99.4 2.7E-13 9.2E-18 133.9 10.9 131 64-203 6-151 (341)
40 1od6_A PPAT, phosphopantethein 99.4 1.7E-12 5.7E-17 115.4 12.9 129 259-392 3-139 (160)
41 1ej2_A Nicotinamide mononucleo 99.4 1.4E-12 4.9E-17 118.8 12.6 126 66-203 4-142 (181)
42 3do8_A Phosphopantetheine aden 99.4 8.5E-14 2.9E-18 123.4 4.2 124 67-202 2-142 (148)
43 3gmi_A UPF0348 protein MJ0951; 99.4 4.5E-12 1.5E-16 127.2 13.3 92 64-161 51-151 (357)
44 1f9a_A Hypothetical protein MJ 99.3 9E-12 3.1E-16 112.1 13.7 126 67-203 2-136 (168)
45 2qtr_A Nicotinate (nicotinamid 99.3 1.9E-12 6.6E-17 118.1 8.5 134 256-393 2-167 (189)
46 1kam_A Deamido-NAD(+), nicotin 99.3 1.3E-11 4.6E-16 113.4 13.0 135 256-393 7-172 (194)
47 1kqn_A Nmnat, nicotinamide mon 99.3 4.4E-12 1.5E-16 123.5 9.9 86 65-152 8-106 (279)
48 1mrz_A Riboflavin kinase/FMN a 99.3 6.1E-12 2.1E-16 123.3 9.6 131 259-393 2-148 (293)
49 3do8_A Phosphopantetheine aden 99.3 1.8E-13 6E-18 121.4 -1.3 128 258-394 2-145 (148)
50 1nup_A FKSG76; NAD biosynthesi 99.3 1.2E-11 4.1E-16 118.6 9.6 88 65-152 6-104 (252)
51 2ejc_A Pantoate--beta-alanine 99.2 5.5E-13 1.9E-17 129.5 -0.7 114 67-181 23-162 (280)
52 1yum_A 'probable nicotinate-nu 99.2 6.8E-11 2.3E-15 112.8 13.1 92 255-348 22-129 (242)
53 1k4m_A NAMN adenylyltransferas 99.2 4.8E-11 1.6E-15 111.3 10.0 90 257-348 3-109 (213)
54 1lw7_A Transcriptional regulat 99.1 4.9E-10 1.7E-14 112.3 13.6 129 65-200 2-154 (365)
55 3h05_A Uncharacterized protein 99.1 1.6E-10 5.6E-15 105.2 8.4 131 256-393 2-150 (177)
56 2h29_A Probable nicotinate-nuc 99.1 3.2E-10 1.1E-14 103.7 9.6 134 256-393 2-167 (189)
57 2x0k_A Riboflavin biosynthesis 99.0 6.6E-10 2.3E-14 110.9 11.1 134 256-393 15-175 (338)
58 1ej2_A Nicotinamide mononucleo 99.0 1.7E-09 5.7E-14 98.3 12.2 125 257-393 4-143 (181)
59 2qjt_B Nicotinamide-nucleotide 99.0 1.5E-09 5.1E-14 107.7 12.4 130 65-202 7-152 (352)
60 1lw7_A Transcriptional regulat 99.0 4.3E-10 1.5E-14 112.8 8.4 69 256-324 2-78 (365)
61 3op1_A Macrolide-efflux protei 99.0 1.5E-09 5.2E-14 106.8 11.9 133 256-393 20-178 (308)
62 1f9a_A Hypothetical protein MJ 99.0 4E-09 1.4E-13 94.7 13.5 124 258-393 2-137 (168)
63 2qjo_A Bifunctional NMN adenyl 98.9 3.4E-09 1.2E-13 104.4 10.0 128 256-393 7-152 (341)
64 1v8f_A Pantoate-beta-alanine l 98.9 1.3E-10 4.4E-15 112.5 -1.6 128 65-197 19-186 (276)
65 2qjt_B Nicotinamide-nucleotide 98.9 9.8E-09 3.3E-13 101.8 11.3 59 256-315 7-65 (352)
66 3ag6_A Pantothenate synthetase 98.7 1.9E-09 6.4E-14 104.7 0.5 109 68-181 28-163 (283)
67 1nup_A FKSG76; NAD biosynthesi 98.7 3.6E-08 1.2E-12 94.3 9.1 83 256-338 6-100 (252)
68 1kqn_A Nmnat, nicotinamide mon 98.7 3.4E-08 1.2E-12 96.0 8.3 72 254-325 6-83 (279)
69 2ejc_A Pantoate--beta-alanine 98.6 7.2E-08 2.5E-12 93.6 7.6 70 255-326 21-94 (280)
70 3cov_A Pantothenate synthetase 98.5 1.1E-08 3.8E-13 100.0 0.2 112 67-181 34-174 (301)
71 1v47_A ATP sulfurylase; produc 98.3 2.8E-06 9.6E-11 84.9 12.3 133 66-203 156-329 (349)
72 1jhd_A Sulfate adenylyltransfe 98.3 5E-06 1.7E-10 84.4 14.2 133 66-203 193-371 (396)
73 3gmi_A UPF0348 protein MJ0951; 98.2 3.4E-06 1.2E-10 84.5 10.1 90 255-347 51-151 (357)
74 3uk2_A Pantothenate synthetase 97.5 0.00013 4.6E-09 70.4 6.9 67 67-134 23-92 (283)
75 1v8f_A Pantoate-beta-alanine l 97.0 0.0019 6.4E-08 62.4 8.6 64 258-325 21-88 (276)
76 3inn_A Pantothenate synthetase 97.0 0.002 6.7E-08 63.0 8.6 75 55-134 34-113 (314)
77 3ag6_A Pantothenate synthetase 96.6 0.0059 2E-07 59.1 9.0 67 255-325 22-94 (283)
78 3q12_A Pantoate--beta-alanine 96.5 0.0031 1.1E-07 61.0 5.7 39 254-295 23-63 (287)
79 3q12_A Pantoate--beta-alanine 96.4 0.0038 1.3E-07 60.3 6.0 74 56-134 17-95 (287)
80 3cov_A Pantothenate synthetase 96.1 0.012 4E-07 57.5 7.8 62 264-326 40-106 (301)
81 3inn_A Pantothenate synthetase 95.6 0.028 9.5E-07 54.9 8.1 68 254-325 41-114 (314)
82 3mxt_A Pantothenate synthetase 95.3 0.034 1.1E-06 53.7 7.3 60 70-134 32-94 (285)
83 3uk2_A Pantothenate synthetase 95.2 0.046 1.6E-06 52.8 7.9 69 255-325 21-93 (283)
84 1r6x_A ATP:sulfate adenylyltra 95.1 0.15 5.2E-06 51.5 12.0 94 66-164 188-292 (395)
85 1g8f_A Sulfate adenylyltransfe 95.0 0.49 1.7E-05 49.4 15.8 94 66-164 189-293 (511)
86 3n8h_A Pantothenate synthetase 94.8 0.054 1.9E-06 51.6 7.0 67 67-134 25-94 (264)
87 3mxt_A Pantothenate synthetase 94.6 0.078 2.7E-06 51.1 7.9 67 254-325 23-95 (285)
88 1v47_A ATP sulfurylase; produc 93.0 0.13 4.3E-06 51.3 6.1 89 258-350 157-260 (349)
89 3n8h_A Pantothenate synthetase 92.8 0.075 2.6E-06 50.6 4.0 42 253-295 21-62 (264)
90 1jhd_A Sulfate adenylyltransfe 92.6 0.12 4.2E-06 52.2 5.5 90 257-350 193-299 (396)
91 1m8p_A Sulfate adenylyltransfe 91.9 0.61 2.1E-05 49.2 10.2 94 66-164 191-295 (573)
92 2gks_A Bifunctional SAT/APS ki 91.4 0.8 2.8E-05 48.0 10.3 94 66-164 164-269 (546)
93 1x6v_B Bifunctional 3'-phospho 89.1 4.7 0.00016 43.0 13.9 95 65-164 412-525 (630)
94 3cr8_A Sulfate adenylyltranfer 86.9 4.6 0.00016 42.3 12.1 94 66-164 164-268 (552)
95 1g8f_A Sulfate adenylyltransfe 55.8 89 0.003 32.2 11.9 90 258-351 190-294 (511)
96 2gks_A Bifunctional SAT/APS ki 39.6 36 0.0012 35.4 5.9 88 258-349 165-268 (546)
97 1m8p_A Sulfate adenylyltransfe 28.1 38 0.0013 35.4 3.8 87 259-349 193-294 (573)
98 1r6x_A ATP:sulfate adenylyltra 27.1 53 0.0018 32.9 4.4 91 257-351 188-293 (395)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-72 Score=557.77 Aligned_cols=328 Identities=45% Similarity=0.805 Sum_probs=278.6
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccH
Q 014671 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (420)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~ 142 (420)
.++++|++.||||++|.||+++|++|+++||+|+|||++|+.+...|++|++|++||++++++|+|||+|++..|+....
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~~ 84 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTL 84 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSCCH
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCCHH
Confidence 46789999999999999999999999999999999999999876677789999999999999999999999977776667
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccccccccccccC--CCCCC
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNN--ASLPR 220 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~~~~~~~~~~~--~~~~~ 220 (420)
+|+ ++++||++|+|+||++|.++.+.|+.+++.|+++.+++++++|||+|++||+.++++|+...+... .+...
T Consensus 85 efi----~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
T 3elb_A 85 ETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYAD 160 (341)
T ss_dssp HHH----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--------------------
T ss_pred HHH----HHhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHH
Confidence 886 478999999999999999999999999999999999999999999999999999999886432211 11223
Q ss_pred Cchhh--hcCcccccccccccccchhccccCCCCCCCCeEEEEcCccccCCHHHHHHHHHHHhcCC--EEEEEEecCccc
Q 014671 221 DPLRA--IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVGIYTDQIV 296 (420)
Q Consensus 221 ~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd--~LiVgV~~D~~v 296 (420)
.++.. +.++++.+++|++++++|.||++|+.|.+++++||++|+|||||.||+++|++|+++|| +|||||++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v 240 (341)
T 3elb_A 161 SFGKCPGGRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEV 240 (341)
T ss_dssp -----------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHH
T ss_pred hhccCccccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhh
Confidence 34322 34678889999999999999999999999999999999999999999999999999999 999999999988
Q ss_pred cC--CC-CCCCCHHHHHHhhhhccccceEEEcCCCCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEE
Q 014671 297 RG--SY-HPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQL 373 (420)
Q Consensus 297 ~~--~~-~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~ 373 (420)
++ |+ +|+|+++||+++|++|++||+|++++|+.++.+++++++||++|||++|...+ ..+.|+|.+++.+|++.+
T Consensus 241 ~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~--~~g~d~y~~~k~~G~~~~ 318 (341)
T 3elb_A 241 NHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPD--RDGSDPYQEPKRRGIFRQ 318 (341)
T ss_dssp HHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEEECSSCCHHHHHHTTCSEEEECSSCCCCC--TTSCCTTHHHHHHTCEEE
T ss_pred HhhcCCCCCCCCHHHHHHHHHHcCCCCCEEECCCCcchHHHHHhcCCcEEEECCCCcccc--CCccchHHHHHhCCEEEE
Confidence 76 55 49999999999999999999999999999899999999999999999987754 346789999999999999
Q ss_pred eCCCCCCCHHHHHHHHHhchHhH
Q 014671 374 LESPKSITTTSVAQRIIANHEAY 396 (420)
Q Consensus 374 ~~~~~~~Stt~Ii~RI~~~~~~~ 396 (420)
+++++++|||+||+||++||++|
T Consensus 319 i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 319 IDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp CCCSCCCCHHHHHHHHHC-----
T ss_pred cCCCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999887
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-34 Score=271.11 Aligned_cols=153 Identities=33% Similarity=0.647 Sum_probs=130.1
Q ss_pred CCCCCCeEEEEcCccccCCHHHHHHHHHHHhc--CCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCC
Q 014671 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAP 327 (420)
Q Consensus 251 ~~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~--gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~ 327 (420)
.+.+.+++||++|+||+||.||+++|++|+++ ||+|||||++|+.+.+ ++.|+|+++||+++|++|++||+|++++|
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~p 150 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSCC
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECCc
Confidence 44566789999999999999999999999999 5899999999998876 44699999999999999999999999999
Q ss_pred CCchHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhchHhHHHHHhhhhHh
Q 014671 328 WEVTKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVS 406 (420)
Q Consensus 328 ~~~~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~~~~~~r~~~k~~~ 406 (420)
|.++.+++++++||+++||+++... ..+.++|..+++.|+++++++++++|||+|++||++++..|++||.+|..+
T Consensus 151 ~~l~~d~i~~~~~d~Vv~GDd~~~~---~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~~ 226 (236)
T 3hl4_A 151 WTLTPEFLAEHRIDFVAHDDIPYSS---AGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYT 226 (236)
T ss_dssp SSCCHHHHHHTTCCEEEEESSCCCC---SSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC-----------
T ss_pred CcCcHHHHHHcCCCEEEECCccccC---CCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCCC
Confidence 9988999999999999999886543 345678999999999999999999999999999999999999999999543
No 3
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.97 E-value=4.5e-30 Score=242.80 Aligned_cols=142 Identities=43% Similarity=0.685 Sum_probs=130.9
Q ss_pred cCCCCceEEEEecccCcCCHHHHHHHHHHHHh--CCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCC
Q 014671 60 CGKKKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAP 137 (420)
Q Consensus 60 ~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~l--gd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p 137 (420)
.+..++++||+.|+||++|.||+++|++|+++ +|+|+|||++|+.+...|++|+++.+||++++++|+|||+|+++.|
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~p 150 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSCC
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECCc
Confidence 34467889999999999999999999999999 5899999999998877788899999999999999999999999999
Q ss_pred ccccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhccc
Q 014671 138 YAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (420)
Q Consensus 138 ~~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~~~ 205 (420)
|.++.+|++ +++||+||+|+|+.++.++.+.|+.+++.|+++.+++++++|||+|++||+....
T Consensus 151 ~~l~~d~i~----~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~ 214 (236)
T 3hl4_A 151 WTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYD 214 (236)
T ss_dssp SSCCHHHHH----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CcCcHHHHH----HcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHH
Confidence 988888874 6899999999999998888899999999999999999999999999999998644
No 4
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.1e-28 Score=241.12 Aligned_cols=136 Identities=31% Similarity=0.531 Sum_probs=123.6
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHH
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKD 333 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~ 333 (420)
.+++|+++|+||+||.||+++|++|+++||+|+|||++|+.+.+ ++.|+++++||++++++|++||+|++++++..+.+
T Consensus 6 ~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~~e 85 (341)
T 3elb_A 6 RAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLE 85 (341)
T ss_dssp CCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSCCHH
T ss_pred CceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCCHHH
Confidence 36789999999999999999999999999999999999998765 44599999999999999999999999988878899
Q ss_pred HHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014671 334 MITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 334 ~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
++++++||++|+|+||..+ ..+.+.|...+.+|+++++++++++|||+|++||+...
T Consensus 86 fi~~~~~d~vV~G~D~~~g---~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~ 142 (341)
T 3elb_A 86 TLDKYNCDFCVHGNDITLT---VDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVT 142 (341)
T ss_dssp HHHHTTCSEEEECSCCCBC---TTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--
T ss_pred HHHHhCCCEEEECCCCCCC---CCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhc
Confidence 9999999999999999775 24567888888999999999999999999999998853
No 5
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.90 E-value=1.7e-23 Score=181.57 Aligned_cols=129 Identities=29% Similarity=0.466 Sum_probs=95.6
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
|++++++|+|||+|.||+.++++|+++++.++|++++|+.....+.+|+++.+||++|+++++++|.++...++. +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QK 77 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HH
Confidence 357999999999999999999999999999999999998542212268999999999999998899998755543 67
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
++. +++++++++|+|+||. +.++.|++.+++..+++...||||.||++|.++
T Consensus 78 ~~~-~~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDD-VEKFDVDVFVMGHDWE------GEFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHH-HHHTTCCEEEECGGGT------TTTGGGTTTSEEEECSSCC--------------
T ss_pred HHH-HHHcCCCEEEECCCCc------CcHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 765 5788999999999983 234467888999999998889999999999865
No 6
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.89 E-value=2.3e-23 Score=179.85 Aligned_cols=128 Identities=34% Similarity=0.495 Sum_probs=105.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
|++++++|+|||+|.||+.++++|++.+|.++|++++++.......+++++.+||++|+++++++|.++...++. +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWE---QK 77 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCST---TH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HH
Confidence 357999999999999999999999999999999999987322112268999999999999998899988765553 56
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHh
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~ 202 (420)
++. +++++++++++|+||. +.++.|++.+++..+++...||||.||++|.+
T Consensus 78 ~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~~ 128 (129)
T 1coz_A 78 KQD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIAG 128 (129)
T ss_dssp HHH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC--
T ss_pred HHH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHHh
Confidence 655 5678999999999983 23456788899999999889999999998763
No 7
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.88 E-value=2.3e-22 Score=177.41 Aligned_cols=135 Identities=33% Similarity=0.447 Sum_probs=89.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
|++++++|+|||+|.||+.+|++|+++++.++|++++++.....+.++++|.+||+++++++++||.++...|. +|
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~----~f 77 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEG----DM 77 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTT----CH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCch----hH
Confidence 57899999999999999999999999999999999998865432237899999999999999889999986443 36
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEec--c--CCCCChHHHHHHHHhcccc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R--TEGVSSTDIVGRILSSMED 206 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r--~~~ISST~Ir~rI~~~~~~ 206 (420)
++ ++++++++++|+|+||+|+. ....+..++.| .+..++ . ...||||.||++|.+..++
T Consensus 78 ~~-~~~~l~~~~iv~G~d~~f~~--~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~~ 141 (143)
T 3glv_A 78 MK-TVIEVKPDIITLGYDQKFDE--AELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIGE 141 (143)
T ss_dssp HH-HHHHHCCSEEEECTTCHHHH--HHHHHHHHHHTCCCEEEECCCCC-------------------
T ss_pred HH-HHHhcCCCEEEECCCCCCCH--HHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhcc
Confidence 64 66789999999999998842 11122223233 333322 2 2469999999999876553
No 8
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.83 E-value=1.3e-20 Score=185.68 Aligned_cols=136 Identities=21% Similarity=0.202 Sum_probs=109.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeE---EEEEecch--h-hhhc---CC-CCCCcHHHHHHHHhccccccEEEe
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDEL---VVGVVSDE--E-IIAN---KG-PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~L---iVgV~sd~--~-i~~~---K~-~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
...|+++|+|||+|.||+.+|++|++.|+.+ .++++.|+ . +... +. +++++.+||.++++++ +||.++.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE
Confidence 4579999999999999999999999998542 44455554 2 2211 12 5799999999999998 6999987
Q ss_pred CCCcc-----cc-HHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCCe--EEEecc----CCCCChHHHHHHHHh
Q 014671 135 NAPYA-----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIKR----TEGVSSTDIVGRILS 202 (420)
Q Consensus 135 ~~p~~-----~~-~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g~--~~~v~r----~~~ISST~Ir~rI~~ 202 (420)
.||+ .+ ++|+++++.+++++.+|+|+||+||. +.++.+.|++.|+ +..++. ...||||.||+.|.+
T Consensus 99 -~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~ 176 (308)
T 3op1_A 99 -LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILD 176 (308)
T ss_dssp -ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHH
T ss_pred -ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHc
Confidence 4443 22 48998888899999999999999999 9999999998875 666665 245999999999986
Q ss_pred c
Q 014671 203 S 203 (420)
Q Consensus 203 ~ 203 (420)
+
T Consensus 177 G 177 (308)
T 3op1_A 177 G 177 (308)
T ss_dssp T
T ss_pred C
Confidence 5
No 9
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.82 E-value=3.2e-20 Score=160.09 Aligned_cols=126 Identities=34% Similarity=0.491 Sum_probs=106.1
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccc-cCCCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIV-RGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v-~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||+.++++|++++|.++|+++.|+.. .+++.|+++.+||++++++|+++|.|++..++..+.+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~~~ 80 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQD 80 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHHHH
Confidence 36899999999999999999999999999999999998732 12446899999999999999999999987777667777
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHH
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRII 390 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~ 390 (420)
+++++|++++.|.||..+. ...+..|.+..+++...+|||.|.++|.
T Consensus 81 l~~~~~~~iv~G~D~~~~~---------~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 81 IIDHNIDVFVMGDDWEGKF---------DFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHHTTCSEEEEEGGGTTTT---------GGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHHhCCcEEEECCCCCCcH---------HHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 8899999999999984321 1245568888999988999999998764
No 10
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.82 E-value=2.5e-20 Score=161.46 Aligned_cols=128 Identities=28% Similarity=0.488 Sum_probs=95.7
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcccc-CCCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVR-GSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~-~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||+.+|++|++++|.++|+++.|+... +++.|+++.+||++++++|+++|.|++..++..+.+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~~~ 80 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDD 80 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGGHHHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChHHHHHH
Confidence 368999999999999999999999999999999999987432 2445899999999999999999999996666666677
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhc
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIAN 392 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~ 392 (420)
+++++|++++.|.|+..+. ...+..|.+..++....+|||.|.++|.+.
T Consensus 81 ~~~~~~~~iv~G~D~~~~~---------~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 81 VEKFDVDVFVMGHDWEGEF---------DFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHHTTCCEEEECGGGTTTT---------GGGTTTSEEEECSSCC--------------
T ss_pred HHHcCCCEEEECCCCcCcH---------HHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 8899999999999984321 124556889899988899999999988664
No 11
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.79 E-value=2.3e-19 Score=175.99 Aligned_cols=130 Identities=21% Similarity=0.267 Sum_probs=101.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCe---EEEEEecc--hhhhhcC-CCCCCcHHHHHHHHhccccccEEEeCCCc---
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDE---LVVGVVSD--EEIIANK-GPPVLSMEERLALVSGLKWVDEVIANAPY--- 138 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~---LiVgV~sd--~~i~~~K-~~pi~t~eER~~ll~~~~~VD~vi~~~p~--- 138 (420)
|+++|+||++|.||+++|++|+++|+. ..+++++| +.+...+ .+++++.+||+++++++. ++.+++ |
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~---F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLD---FFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEEC---HHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEE---hHHh
Confidence 789999999999999999999999864 22444444 4332222 257999999999999987 555554 3
Q ss_pred --cccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEeccC----CCCChHHHHHHHHhc
Q 014671 139 --AITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRT----EGVSSTDIVGRILSS 203 (420)
Q Consensus 139 --~~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~----~~ISST~Ir~rI~~~ 203 (420)
...++|+++++ ++++++|+|+||+||.++.++.+.|++.| ++..++.. ..||||.||+.|.++
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 12257888766 89999999999999999999999998754 67777753 469999999999875
No 12
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.79 E-value=9.6e-20 Score=160.60 Aligned_cols=133 Identities=22% Similarity=0.341 Sum_probs=90.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~ 334 (420)
+++|++.|+||++|.||..+|++|++++|.++|+|+.|+...+ ++.|+++.+||++++++|++||.|++..+.+ ..++
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f~~~ 80 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEGD-MMKT 80 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTTC-HHHH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCchh-HHHH
Confidence 6899999999999999999999999999999999999886653 4569999999999999999999999988776 4578
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe---EEEeCC--CCCCCHHHHHHHHHhchH
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI---FQLLES--PKSITTTSVAQRIIANHE 394 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~---~~~~~~--~~~~Stt~Ii~RI~~~~~ 394 (420)
+++++++++|+|.|+..+ ..+.....+..|. .+.... ...+|||.|.+.|.+.+.
T Consensus 81 ~~~l~~~~iv~G~d~~f~-----~~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 81 VIEVKPDIITLGYDQKFD-----EAELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HHHHCCSEEEECTTCHHH-----HHHHHHHHHHHTCCCEEEECCCCC------------------
T ss_pred HHhcCCCEEEECCCCCCC-----HHHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 999999999999986332 1112223333442 222222 346999999999977653
No 13
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.77 E-value=4.7e-19 Score=177.09 Aligned_cols=136 Identities=16% Similarity=0.230 Sum_probs=107.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCe---EEEEEecchh---hh-hcC-CCCCCcHHHHHHHHhccccccEEEeCCC
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDE---LVVGVVSDEE---II-ANK-GPPVLSMEERLALVSGLKWVDEVIANAP 137 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~---LiVgV~sd~~---i~-~~K-~~pi~t~eER~~ll~~~~~VD~vi~~~p 137 (420)
..|+++|+|||+|.||+.||++|++.++. ..+++++|+. +. ..+ .+++++.++|+++++++ +||.++. .|
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-ID 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-EC
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-cc
Confidence 47999999999999999999999998854 4666777663 21 122 15699999999999997 6999886 33
Q ss_pred cc-----cc-HHHHHH-HHhhcCccEEEEcCCCCCCCCCccHHHHHHhCC----eEEEeccC----CCCChHHHHHHHHh
Q 014671 138 YA-----IT-EQFMNR-LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKRT----EGVSSTDIVGRILS 202 (420)
Q Consensus 138 ~~-----~~-~~fl~~-ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g----~~~~v~r~----~~ISST~Ir~rI~~ 202 (420)
|+ .+ ++|+++ ++++++++++|+|+||+||.++.++.+.|++.+ ++..++.. ..||||.||+.|.+
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 42 22 479988 446799999999999999999999998888765 45666652 35999999999986
Q ss_pred c
Q 014671 203 S 203 (420)
Q Consensus 203 ~ 203 (420)
+
T Consensus 174 G 174 (338)
T 2x0k_A 174 G 174 (338)
T ss_dssp T
T ss_pred C
Confidence 6
No 14
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.75 E-value=4.7e-19 Score=158.88 Aligned_cols=127 Identities=19% Similarity=0.213 Sum_probs=98.0
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||++++++|++++|+|+|++++|. .|+|+++.+||+++++. ++.+|.|.+....+.+.++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~~~~ 77 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYL 77 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GGCCSSCHHHHHHHHHHHHTTSTTEEEEEECSCHHHH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CCCCCCCHHHHHHHHHHHhcCCCcEEEEecCchHHHH
Confidence 478999999999999999999999999999999999986 45699999999999987 7899998876556678899
Q ss_pred HhhcCccEEEEc----CCcCCCCCCCCCCChHHHHHhCC---eEEEeCCCC---CCCHHHHHHHHHhc
Q 014671 335 ITTFNICLVVHG----TVSETNTPLTGQSDPYEVAKSMG---IFQLLESPK---SITTTSVAQRIIAN 392 (420)
Q Consensus 335 i~~~~~d~vv~G----~d~~~~~~~~~~~d~~~~~k~~G---~~~~~~~~~---~~Stt~Ii~RI~~~ 392 (420)
+++++||++++| +||+.. .+.....+..+ ..++++..+ .+|||.|.+.+..+
T Consensus 78 ~~~~~~~~ivrG~r~~~D~~ye------~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 78 AKEYHCKVLVRGLRVVSDFEYE------LQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HHHTTCCCBCCCCSCCCCHHHH------HHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HHHcCCCEEEECCcccchhhhh------HHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 999999999999 444321 11111223332 223344443 79999988876544
No 15
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.75 E-value=1.8e-18 Score=159.35 Aligned_cols=132 Identities=21% Similarity=0.240 Sum_probs=94.7
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCcccc
Q 014671 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAIT 141 (420)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~ 141 (420)
+.++++++.|+|||+|.||+.++++|++++|+++|+|.+++ .| +|+++.+||++|++. ++++|.+.. .+|+
T Consensus 20 ~~mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~~f~-- 91 (187)
T 3k9w_A 20 GSMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-MGFT-- 91 (187)
T ss_dssp CCCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-EEES--
T ss_pred CCcEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-Eech--
Confidence 44689999999999999999999999999999999999875 23 589999999999998 678998876 2332
Q ss_pred HHHHHHHHhhcCccEEEEc----CCCCCCCCCccHHHHHHhCCeEEEeccC---CCCChHHHHHHHHhc
Q 014671 142 EQFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (420)
Q Consensus 142 ~~fl~~ll~~~~~d~vV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r~---~~ISST~Ir~rI~~~ 203 (420)
++..+++++++++++|+| .||.+...-......+....+.+.+... ..||||.||+++..+
T Consensus 92 -~~~~d~l~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 92 -GLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp -SCHHHHHHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred -hhHHHHHHHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 233344567899999999 5554211000000111112234444443 369999999999865
No 16
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.72 E-value=1.4e-17 Score=147.93 Aligned_cols=129 Identities=17% Similarity=0.231 Sum_probs=93.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCccccHHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~~~f 144 (420)
++++++|+|||+|.||+.++++|++.+|.++++++.++ .| +++++.++|++|++. +.++|.+... +++ .|
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~~---~~ 72 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEVV-GFS---DL 72 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEEE-EEC---SC
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEEc-ccc---hH
Confidence 57999999999999999999999999999999998875 34 478999999999985 7788877652 232 12
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHH-HhC---C-eEEEeccC--CCCChHHHHHHHHhc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA-KKV---G-RYKQIKRT--EGVSSTDIVGRILSS 203 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~l-k~~---g-~~~~v~r~--~~ISST~Ir~rI~~~ 203 (420)
..+++++++++++++|.|+.++.........+ +.. . .+..++.. ..||||.||++|.++
T Consensus 73 ~~~~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 73 MANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp HHHHHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 23345678999999999976644322221111 221 1 22333332 369999999999865
No 17
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.72 E-value=4.4e-18 Score=153.29 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=93.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhccccceEEEcCCCCchHHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMI 335 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~~~~~~~i 335 (420)
++++++.|+|||+|.||++++++|++++|+|+|+++.|. .++|+++.+||+++++.+...|.|.+....+.+.+++
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~~ 80 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RKDPHLKLEERVNLIADVLTDERVEVLPLTGLLVDFA 80 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC----------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----ccCCCCCHHHHHHHHHHhhCCCCEEEEeccchHHHHH
Confidence 589999999999999999999999999999999999886 4569999999999998765449887766666888999
Q ss_pred hhcCccEEEEcC----CcCCCCCCCCCCChHHHHHhC--C-eEEEeCCC---CCCCHHHHHHHHHhch
Q 014671 336 TTFNICLVVHGT----VSETNTPLTGQSDPYEVAKSM--G-IFQLLESP---KSITTTSVAQRIIANH 393 (420)
Q Consensus 336 ~~~~~d~vv~G~----d~~~~~~~~~~~d~~~~~k~~--G-~~~~~~~~---~~~Stt~Ii~RI~~~~ 393 (420)
++++++++++|- ||+.. .+.....+.. + ..+++... ..+|||.|.+++..+.
T Consensus 81 ~~~~~~~~v~G~r~~~Df~~e------~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 142 (162)
T 4f3r_A 81 KTHQANFILRGLRAVSDFDYE------FQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGG 142 (162)
T ss_dssp HHTTCCEEEEEECSHHHHHHH------HHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTTC
T ss_pred HHcCCCEEEECCCchhhhhhH------HHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcCC
Confidence 999999999994 43211 0001112222 2 23444333 3799998888876554
No 18
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.71 E-value=3e-17 Score=147.89 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=93.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCccccHHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~~~f 144 (420)
++++++|+|||+|.||+.++++|++.+|.++|++..++ .| +++++.+||++|++. +..+|.+.. .+++ +|
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~ 73 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQ---GL 73 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECS---SC
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccc---hH
Confidence 57999999999999999999999999999988887543 34 578999999999985 567787665 2332 24
Q ss_pred HHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHh----CCeEEEeccC---CCCChHHHHHHHHhc
Q 014671 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK----VGRYKQIKRT---EGVSSTDIVGRILSS 203 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~----~g~~~~v~r~---~~ISST~Ir~rI~~~ 203 (420)
..+++++++++++++|.|+.++.+.......+.+ ..+...+... ..||||.||+++.++
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 4445567899999999998876543333322222 1223333322 369999999999865
No 19
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.70 E-value=9.5e-18 Score=153.49 Aligned_cols=133 Identities=19% Similarity=0.083 Sum_probs=102.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccEEEeCCCcc--
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vi~~~p~~-- 139 (420)
++++++|+|||+|.||+.++++|++.+ |.+++++++++. .|. +++++.++|++|++. ++++|.+.. .+++
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 578999999999999999999999998 999999988763 343 569999999999984 667887766 3343
Q ss_pred -----ccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC-----------------CCCChH
Q 014671 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (420)
Q Consensus 140 -----~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~-----------------~~ISST 194 (420)
++.++++.+-.++ |+ ++|+|.|+.++..+++.++.+.+.+.+..++|. ..||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 4445554443333 33 399999999888888888888888876666542 259999
Q ss_pred HHHHHHHhc
Q 014671 195 DIVGRILSS 203 (420)
Q Consensus 195 ~Ir~rI~~~ 203 (420)
.||+++.++
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999865
No 20
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.70 E-value=4.5e-18 Score=152.50 Aligned_cols=129 Identities=20% Similarity=0.193 Sum_probs=90.4
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCcc-ccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~-~~~ 142 (420)
++++++.|+||++|.||+.++++|++++|+|+|++.+++ .| .|+++.+||++|++. ++.++.+... +|+ ...
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v~-~~~~l~~ 75 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVECV-AFEGLLA 75 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEEE-EECSCHH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEEE-ecCchHH
Confidence 468999999999999999999999999999999998876 34 589999999999987 6778876552 222 223
Q ss_pred HHHHHHHhhcCccEEEEc----CCCCCCCCCccHHHHHHhCCeEEEeccCC---CCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRTE---GVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r~~---~ISST~Ir~rI~~~ 203 (420)
+ ++++++++++|.| .||.+..+-......|....+.+.++.++ .+|||.||+.+..+
T Consensus 76 ~----~~~~~~~~~ivrG~r~~~D~~ye~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 76 Y----LAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp H----HHHHTTCCCBCCCCSCCCCHHHHHHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred H----HHHHcCCCEEEECCcccchhhhhHHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 3 4467899999999 66632110000010111112333344443 79999999998854
No 21
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.69 E-value=2.2e-16 Score=145.46 Aligned_cols=133 Identities=18% Similarity=0.062 Sum_probs=98.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHh-ccccccEEEeCCCcc--
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVS-GLKWVDEVIANAPYA-- 139 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~-~~~~VD~vi~~~p~~-- 139 (420)
++++++|+|||+|.||+.++++|++.+ |.+++++++++. .|. +++++.++|++|++ ++++++.+.. .+++
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 678999999999999999999999998 889999987763 343 57899999999998 4778887766 2333
Q ss_pred -----ccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC-----------------CCCChH
Q 014671 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (420)
Q Consensus 140 -----~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~-----------------~~ISST 194 (420)
++.++++.+..++ |+ ++|+|.|+.++...+..++.+-+...+...+|. ..||||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 4556666655555 45 999999998887777777655555555554442 159999
Q ss_pred HHHHHHHhc
Q 014671 195 DIVGRILSS 203 (420)
Q Consensus 195 ~Ir~rI~~~ 203 (420)
.||+++..+
T Consensus 163 ~IR~~i~~g 171 (194)
T 1kam_A 163 MIRERFKSK 171 (194)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999865
No 22
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.69 E-value=4.2e-17 Score=150.15 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=99.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||+.++++|++++|.|+|+|.+|. .+.|+++.+||+++++. ++.+|.|.+....+.+.++
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~~d~ 97 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AKKPFFSLEERLKIANEVLGHYPNVKVMGFTGLLKDF 97 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GGCCSSCHHHHHHHHHHHHTTCTTEEEEEESSCHHHH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----ccCCCCCHHHHHHHHHHHhccCCcEEEEechhhHHHH
Confidence 689999999999999999999999999999999999875 45699999999999988 6899999886655678899
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhC--C-eEEEeCCC---CCCCHHHHHHHHHhch
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM--G-IFQLLESP---KSITTTSVAQRIIANH 393 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~--G-~~~~~~~~---~~~Stt~Ii~RI~~~~ 393 (420)
+++++++++++|-+...+ |..+ .......+.. + ..+++... ..+|||.|.+++..+.
T Consensus 98 l~~l~~~~iv~G~r~~~D-f~~E-~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~ 160 (187)
T 3k9w_A 98 VRANDARVIVRGLRAVSD-FEYE-FQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLGG 160 (187)
T ss_dssp HHHTTCSEEEEECCTTSC-HHHH-HHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHcCCCEEEECCCcccc-cchH-HHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcCC
Confidence 999999999999442211 1100 0001112222 2 23444433 4799999999887644
No 23
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.68 E-value=2.1e-17 Score=148.90 Aligned_cols=130 Identities=19% Similarity=0.213 Sum_probs=86.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccEEEeCCCccccHHH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~~~f 144 (420)
++++++.|+||++|.||+.++++|++++|+++|++.+++ .| +|+++.+||++|++.+...+.+........+.++
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~ 79 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLVDF 79 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHHHH
Confidence 568999999999999999999999999999999999875 34 6899999999999875444655442211233344
Q ss_pred HHHHHhhcCccEEEEc----CCCCCCCCCccHHHHHHhCCeEEEeccCC---CCChHHHHHHHHhc
Q 014671 145 MNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRTE---GVSSTDIVGRILSS 203 (420)
Q Consensus 145 l~~ll~~~~~d~vV~G----~D~~~g~~g~~~~~~lk~~g~~~~v~r~~---~ISST~Ir~rI~~~ 203 (420)
+ ++++++++|.| .||.+...-......+....+.+.+...+ .||||.||+++..+
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 4 57899999999 44421000000000111223444444443 79999999998865
No 24
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.66 E-value=1.3e-16 Score=144.91 Aligned_cols=132 Identities=13% Similarity=0.270 Sum_probs=93.7
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEE-cCCCCchHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVII-GAPWEVTKD 333 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi-~~~~~~~~~ 333 (420)
++++++.|+|||+|.||++++++|++++|.|+|+++.+. .|+|+++.+||+++++ +++.++.|.+ ....+.+.+
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tvd 77 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SKQTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVE 77 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHHH
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CCCCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHHH
Confidence 479999999999999999999999999999999998775 4469999999999998 5799999988 555567899
Q ss_pred HHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHh----CCeEEEeCCC--CCCCHHHHHHHHHhch
Q 014671 334 MITTFNICLVVHGTVSETNTPLTGQSDPYEVAKS----MGIFQLLESP--KSITTTSVAQRIIANH 393 (420)
Q Consensus 334 ~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~----~G~~~~~~~~--~~~Stt~Ii~RI~~~~ 393 (420)
++++++++++++|-+.-. ++.. +.......+. .+.+...+.+ ..+|||.|.+++..+.
T Consensus 78 ~~~~l~~~~~i~G~~~~~-d~~~-e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g~ 141 (171)
T 3nd5_A 78 SAKSLGANFLIRGIRNVK-DYEY-EKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGG 141 (171)
T ss_dssp HHHHHTCCEEEEEECSHH-HHHH-HHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHHCCCCEEEECCCchh-hhHH-HHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcCC
Confidence 999999999999944211 1100 0000001111 2233333332 4799999999987654
No 25
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.65 E-value=7.5e-16 Score=137.13 Aligned_cols=122 Identities=23% Similarity=0.288 Sum_probs=86.7
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccEEEeCCCccccHHHH
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYAITEQFM 145 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~~~~fl 145 (420)
++++|+|||+|.||+.++++|++.+|.++++++.++ .|. .++++.++|++|++. +.++|.+.. .+++ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999999998664 233 478999999999985 567786655 2332 244
Q ss_pred HHHHhhcCccEEEEcCCCCCCCCCccHHHHHH-------hC---Ce-EEEeccC--CCCChHHHHHHHHhc
Q 014671 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------KV---GR-YKQIKRT--EGVSSTDIVGRILSS 203 (420)
Q Consensus 146 ~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk-------~~---g~-~~~v~r~--~~ISST~Ir~rI~~~ 203 (420)
.+++++++++++++|.|. +++++.+. .. .. +..+... ..||||.||+++.++
T Consensus 75 ~~~l~~l~~~~~v~G~d~------~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRA------VSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECT------TSCHHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCc------ccchHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 445677899999999872 22222222 11 12 2233322 369999999999865
No 26
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.64 E-value=1.3e-15 Score=138.82 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=99.2
Q ss_pred CCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCch
Q 014671 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 331 (420)
Q Consensus 253 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~ 331 (420)
..+++++++.|+|||+|.||++++++|++++|+|+|++..|. .|+|.++.+||+++++. ++..+.|.+....+.+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~l~ 93 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLV 93 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TSCCSSCHHHHHHHHHHHCTTCTTEEEEECCSCH
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCHHHHHHHHHHHhCCCCCEEEEecCchH
Confidence 456789999999999999999999999999999999999876 45699999999999975 7889999887777789
Q ss_pred HHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHH--hCCeEEEeC-C--CCCCCHHHHHHHHHhch
Q 014671 332 KDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAK--SMGIFQLLE-S--PKSITTTSVAQRIIANH 393 (420)
Q Consensus 332 ~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k--~~G~~~~~~-~--~~~~Stt~Ii~RI~~~~ 393 (420)
.+++++++++++++|-+.-. |+.. +.+.....+ ..-..+++. . ...+|||.|.+++....
T Consensus 94 vd~~~~~~a~~ivrGlr~~~-Dfey-e~~~a~~nr~l~~ietvfl~~~~~~~~ISST~IRe~~~~gg 158 (177)
T 3nbk_A 94 VDFVRSCGMTAIVKGLRTGT-DFEY-ELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGG 158 (177)
T ss_dssp HHHHHHTTCCEEEEEECTTC-CHHH-HHHHHHHHHHHHCCEEEEEECCGGGSSCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECCCchh-HHHH-HHHHHHHHHhcCCCceEEEeCCCcccccchHHHHHHHHcCC
Confidence 99999999999999933211 1100 000000111 111233432 2 24799999999876554
No 27
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.63 E-value=7.3e-16 Score=139.57 Aligned_cols=133 Identities=14% Similarity=0.166 Sum_probs=95.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+|||+|.||+.++++|++++|.|+|+++.+. .++|+++.+||+++++. ++..+.|.+....+.+.++
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tvd~ 78 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KKEGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVDY 78 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC---------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCHHHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CCCCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCHHHH
Confidence 579999999999999999999999999999999999875 44699999999999975 6888888776666688999
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHh----CCeEEEeCCC--CCCCHHHHHHHHHhchH
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKS----MGIFQLLESP--KSITTTSVAQRIIANHE 394 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~----~G~~~~~~~~--~~~Stt~Ii~RI~~~~~ 394 (420)
+++++++++++|.|...+ +..+ .......+. .+.+..++.+ ..+|||.|.+++..+..
T Consensus 79 ~~~l~~~~~I~G~d~~~d-~~~e-~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g~~ 142 (168)
T 3f3m_A 79 CEQVGAKTIIRGLRAVSD-FEYE-LRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRAD 142 (168)
T ss_dssp HHHHTCCEEEEEECTTCC-HHHH-HHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTTCC
T ss_pred HHHcCCCEEEEcCCchhh-hhHH-HHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcCCC
Confidence 999999999999653221 1000 000011111 1223333333 24999999999877654
No 28
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.63 E-value=5.4e-16 Score=140.43 Aligned_cols=129 Identities=18% Similarity=0.207 Sum_probs=85.4
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCc-cccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~-~~~~ 142 (420)
+++++++|+|||+|.||+.++++|++++|+++|++..++ .| +++++.++|++|++. ++..+.+... +| .++.
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~tv 76 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVH-QFSGLLV 76 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEE-ECCSCHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEE-EcCCCHH
Confidence 468999999999999999999999999999999999765 34 589999999999985 4566655442 12 2344
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHH----HHHhCCeEEEeccCC---CCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA----LAKKVGRYKQIKRTE---GVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~----~lk~~g~~~~v~r~~---~ISST~Ir~rI~~~ 203 (420)
+++ +++++++++.|-|-....+.+-... .+....+.+.+..++ .||||.||+++..+
T Consensus 77 d~~----~~l~~~~~I~G~d~~~d~~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 77 DYC----EQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HHH----HHHTCCEEEEEECTTCCHHHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HHH----HHcCCCEEEEcCCchhhhhHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 555 5678999999955322111110000 111111223333332 39999999999865
No 29
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.62 E-value=9.5e-16 Score=139.25 Aligned_cols=129 Identities=19% Similarity=0.195 Sum_probs=95.6
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCCCCchHHHH
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVTKDMI 335 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~~~~~~~~i 335 (420)
-|+++.|+|||+|.||+.++++|++++|.|+|+++++. .++|+++.+||++|++ +++.++.|.+....+.+.+.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~kk~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tvd~l 88 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RKKCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLVDYL 88 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TCCCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CCCCCCCHHHHHHHHHHHhcCCCCEEEecCcchHHHHH
Confidence 48999999999999999999999999999999999985 4459999999999998 799999988855445789999
Q ss_pred hhcCccEEEEcCC-cCCCCCCCCCCChHHH-HHhC---CeEEEeCCC---CCCCHHHHHHHHHhch
Q 014671 336 TTFNICLVVHGTV-SETNTPLTGQSDPYEV-AKSM---GIFQLLESP---KSITTTSVAQRIIANH 393 (420)
Q Consensus 336 ~~~~~d~vv~G~d-~~~~~~~~~~~d~~~~-~k~~---G~~~~~~~~---~~~Stt~Ii~RI~~~~ 393 (420)
+.++++++++|-. |. ++ +......+ .+.+ ...+.+... ..+|||.|.+++..+.
T Consensus 89 ~~l~~~~~i~gl~~w~--d~--~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g~ 150 (173)
T 1vlh_A 89 KKHGIKVLVRGLRAVT--DY--EYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGG 150 (173)
T ss_dssp HHHTCCEEEEEECTTS--CH--HHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTTC
T ss_pred HHhCCCeEEeCCCccc--ch--hhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcCC
Confidence 9999999999931 11 11 00001111 1221 122333222 3699999999987654
No 30
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.62 E-value=6.5e-16 Score=144.46 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=75.5
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHh-ccccccEEEeCCCc------
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY------ 138 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vi~~~p~------ 138 (420)
++++|+|||+|.||+.++++|++.+ |.+++.+++++. .|..++++.++|++|++ ++++++.+.. .+|
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999997 889998887753 34346899999999998 5677887766 233
Q ss_pred -cccHHHHHHHHhhcCcc---EEEEcCCC
Q 014671 139 -AITEQFMNRLFNEHKID---YIIHGDDP 163 (420)
Q Consensus 139 -~~~~~fl~~ll~~~~~d---~vV~G~D~ 163 (420)
+++.+|++.+.++++++ ++++|.|.
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 35678888876677899 99999974
No 31
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.60 E-value=1.7e-15 Score=137.99 Aligned_cols=132 Identities=17% Similarity=0.142 Sum_probs=91.0
Q ss_pred CCCceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeCCCccc
Q 014671 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAI 140 (420)
Q Consensus 62 ~~~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~~p~~~ 140 (420)
+.+++++++.|+|||+|.||+.++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+.+..--.+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~l 92 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQVGHGL 92 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEECCSC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEecCch
Confidence 345779999999999999999999999999999999999775 34 489999999999985 666666654221233
Q ss_pred cHHHHHHHHhhcCccEEEEcCCCCCCCCCcc----HHHHHHhCCeEEEecc---CCCCChHHHHHHHHhc
Q 014671 141 TEQFMNRLFNEHKIDYIIHGDDPCLLPDGTD----AYALAKKVGRYKQIKR---TEGVSSTDIVGRILSS 203 (420)
Q Consensus 141 ~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~----~~~~lk~~g~~~~v~r---~~~ISST~Ir~rI~~~ 203 (420)
+.+|+ +++++++++.|-+...+.+.+- ....+ ...+.+.+.. ...||||.||+++..+
T Consensus 93 ~vd~~----~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 93 VVDFV----RSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp HHHHH----HHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred HHHHH----HHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 45555 5689999999933211111110 01123 3334344332 3469999999998754
No 32
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.59 E-value=8e-16 Score=139.68 Aligned_cols=124 Identities=21% Similarity=0.245 Sum_probs=84.9
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEe-CCCccccH
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA-NAPYAITE 142 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~-~~p~~~~~ 142 (420)
+++++++|+||++|.||+.++++|++++|+|+|++..++ .| +|+++.++|++|++. ++.++.+.. ..--.++.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tv 76 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTV 76 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHH
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHH
Confidence 468999999999999999999999999999999997764 34 489999999999984 577776654 21113455
Q ss_pred HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHH-------Hh---CCeEEEec---cCCCCChHHHHHHHHhc
Q 014671 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA-------KK---VGRYKQIK---RTEGVSSTDIVGRILSS 203 (420)
Q Consensus 143 ~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~l-------k~---~g~~~~v~---r~~~ISST~Ir~rI~~~ 203 (420)
+++ +++++++++.|-|- ..+++.. +. ..+.+.+. ....||||.||+++..+
T Consensus 77 d~~----~~l~~~~~i~G~~~------~~d~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 77 ESA----KSLGANFLIRGIRN------VKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HHH----HHHTCCEEEEEECS------HHHHHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHH----HHCCCCEEEECCCc------hhhhHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 555 46789999999542 1112111 11 12222222 23379999999999865
No 33
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.55 E-value=8.4e-15 Score=133.00 Aligned_cols=126 Identities=25% Similarity=0.294 Sum_probs=87.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHh-ccccccEEEeCCCcc-ccHH
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPYA-ITEQ 143 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vi~~~p~~-~~~~ 143 (420)
.+++++|+|||+|.||+.++++|++++|+|+|++.+++ .| +++++.++|++|++ +++.++.+... +++ ++.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~tvd 86 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKVD-VHHGLLVD 86 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEEe-cCcchHHH
Confidence 47999999999999999999999999999999999974 23 38999999999998 68888876542 232 3445
Q ss_pred HHHHHHhhcCccEEEEcCCCCCCCCCccHH--HHHHh----CCeEEEecc---CCCCChHHHHHHHHhc
Q 014671 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAY--ALAKK----VGRYKQIKR---TEGVSSTDIVGRILSS 203 (420)
Q Consensus 144 fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~--~~lk~----~g~~~~v~r---~~~ISST~Ir~rI~~~ 203 (420)
++ +++++++++.|-.- +.+..... ....+ ..+.+.+.. ...||||.||+++..+
T Consensus 87 ~l----~~l~~~~~i~gl~~--w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 87 YL----KKHGIKVLVRGLRA--VTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HH----HHHTCCEEEEEECT--TSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHhCCCeEEeCCCc--ccchhhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 54 56788999988321 00101111 11111 122232222 2369999999999864
No 34
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.54 E-value=1.6e-14 Score=128.15 Aligned_cols=131 Identities=16% Similarity=0.230 Sum_probs=96.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||+.++++|++.+|.++|.++.|. .+.++++.+||+++++. +..+|.+.+......+.+.
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~~~~ 76 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANF 76 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SSCCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CCCCCCCHHHHHHHHHHHHhcCCCeEEcccchHHHHH
Confidence 478999999999999999999999999999999999875 23589999999999985 8999988875444567789
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHH-HHHhC----CeEEEeCCC--CCCCHHHHHHHHHhch
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYE-VAKSM----GIFQLLESP--KSITTTSVAQRIIANH 393 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~-~~k~~----G~~~~~~~~--~~~Stt~Ii~RI~~~~ 393 (420)
++++++++++.|.|...+ + ....... ..+.. ..+..++.+ ..+|||.|.++|.++.
T Consensus 77 l~~l~~~~~v~G~d~~~~-~--~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g~ 139 (158)
T 1qjc_A 77 ARNQHATVLIRGLRAVAD-F--EYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQG 139 (158)
T ss_dssp HHHTTCCEEEEECCTTCC-H--HHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTTC
T ss_pred HHHcCCCEEEEeccchhh-h--HHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcCC
Confidence 999999999999764222 1 0000000 11222 123333333 3699999999987664
No 35
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.54 E-value=1.3e-14 Score=138.74 Aligned_cols=94 Identities=23% Similarity=0.328 Sum_probs=76.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHh-ccccccEEEeCCCc---
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY--- 138 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vi~~~p~--- 138 (420)
+++++++|+|||+|.||+.++++|++.+ |.++|+++.++. .|..++++.++|++|++ ++.+++.+.+. +|
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTVD-PRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEEC-CGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEEe-eeeec
Confidence 5678999999999999999999999998 999999998862 24457899999999998 46777877663 33
Q ss_pred ----cccHHHHHHHHhhcCcc---EEEEcCC
Q 014671 139 ----AITEQFMNRLFNEHKID---YIIHGDD 162 (420)
Q Consensus 139 ----~~~~~fl~~ll~~~~~d---~vV~G~D 162 (420)
.++.++++.+-.+++|+ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 46678887766667677 8999986
No 36
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.54 E-value=1.5e-14 Score=132.65 Aligned_cols=134 Identities=17% Similarity=0.123 Sum_probs=95.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCC-CCCCcHHHHHHHHhc-cccccEEEeCC-----
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANA----- 136 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vi~~~----- 136 (420)
++++++|+|||+|.||+.++++|++.+ |.+++.+++++. .|. .++++.++|++|++. ++..+.+....
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 578999999999999999999999987 888887877763 343 578999999999984 55555544421
Q ss_pred -CccccHHHHHHHHhhcCcc---EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccC-----------------CCCChHH
Q 014671 137 -PYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSSTD 195 (420)
Q Consensus 137 -p~~~~~~fl~~ll~~~~~d---~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~-----------------~~ISST~ 195 (420)
..+++.++++.+.+.+ |+ ++++|.|.......+..++.+-+...+..++|. ..||||.
T Consensus 80 ~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST~ 158 (189)
T 2h29_A 80 GGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTM 158 (189)
T ss_dssp CSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHHH
T ss_pred CCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHHH
Confidence 2335677887665555 66 899998853332333334444444555555553 2599999
Q ss_pred HHHHHHhc
Q 014671 196 IVGRILSS 203 (420)
Q Consensus 196 Ir~rI~~~ 203 (420)
||+++..+
T Consensus 159 IR~~i~~g 166 (189)
T 2h29_A 159 IRQRVSEG 166 (189)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999865
No 37
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.49 E-value=3.6e-14 Score=129.43 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=95.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhc-ccccc--EEEe-------
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVD--EVIA------- 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD--~vi~------- 134 (420)
+++++++|+|||+|.||+.+++ |.+..|++++++.++. +.| +++.+.++|++|++. ++... .+..
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l 76 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQAL 76 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhc
Confidence 3589999999999999999998 7777799999998752 123 578999999999985 22221 1221
Q ss_pred -CCC-ccccHHHHHHHHhhcC-cc-EEEEcCCCCCCCCCccHHHHHHhCCeEEEeccCCCCChHHHHHHHHhc
Q 014671 135 -NAP-YAITEQFMNRLFNEHK-ID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 135 -~~p-~~~~~~fl~~ll~~~~-~d-~vV~G~D~~~g~~g~~~~~~lk~~g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
... .++|.+.+..+.+.+. .+ ++++|.|.-.+...+..++.+-+...+..+++...||||+||++|.++
T Consensus 77 ~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 77 YQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp C----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred ccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 011 4466777877665552 33 688999954444445556667777789999998899999999999976
No 38
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.47 E-value=1.6e-13 Score=123.41 Aligned_cols=131 Identities=14% Similarity=0.210 Sum_probs=95.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCCCchHHH
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTKDM 334 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~~~~~~~ 334 (420)
++++++.|+||++|.||+.++++|++.+|.++|.+..++ .+.++++.+||+++++. ++.+|.+.+......+.+.
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~~ 77 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDY 77 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SSCCSSCHHHHHHHHHHHHTTCTTEEEEECSSCHHHH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----ccCCCCCHHHHHHHHHHHHhcCCCEEEcccchHHHHH
Confidence 478999999999999999999999999999999888653 22579999999999985 6888988775444567789
Q ss_pred HhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhC--C-eEEE-eCCC--CCCCHHHHHHHHHhc
Q 014671 335 ITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSM--G-IFQL-LESP--KSITTTSVAQRIIAN 392 (420)
Q Consensus 335 i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~--G-~~~~-~~~~--~~~Stt~Ii~RI~~~ 392 (420)
++.+++++++.|.|+..+ +. ...+.....+.+ | .... ++.. ..+|||.|.+++.+.
T Consensus 78 l~~l~~~~~i~G~d~~~~-~~-~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 78 ARRKNAKAILRGLRAVSD-FE-YEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHTTCSEEEEEECSGGG-HH-HHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHcCCCEEEEcCccccc-hH-HHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 999999999999875332 10 000111112211 3 2222 3322 369999999998775
No 39
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.44 E-value=2.7e-13 Score=133.94 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=88.6
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccccccE----E--EeCCC
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE----V--IANAP 137 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~----v--i~~~p 137 (420)
.+++++++|+|||+|.||+.++++|++.+|.++|++.+++.- .+....++.++|++|++.. ..|. + +....
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p--~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVA--ADTRNPWRSPERMAMIEAC-LSPQILKRVHFLTVRD 82 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCC--CCSSSCSCHHHHHHHHHTT-SCHHHHTTEEEEEEEC
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccC--CCCCCCCCHHHHHHHHHHH-hhhccCCeEEEEECCC
Confidence 357899999999999999999999999999999888877532 2223458999999999974 3332 2 22211
Q ss_pred c--ccc--HHHHHHHHhhcC---ccEEEEcCCCCCCCCCccHHHHHHhC--CeEEEeccCCCCChHHHHHHHHhc
Q 014671 138 Y--AIT--EQFMNRLFNEHK---IDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRILSS 203 (420)
Q Consensus 138 ~--~~~--~~fl~~ll~~~~---~d~vV~G~D~~~g~~g~~~~~~lk~~--g~~~~v~r~~~ISST~Ir~rI~~~ 203 (420)
. ... .+|++++++.+. ++++++|.++... .. ..+.. -....++....||||.||+++.++
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~----~~--~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS----SY--YLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG----GG--GGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC----hH--HHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 1 111 356555555443 7899999886321 11 11222 244555545679999999999865
No 40
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.41 E-value=1.7e-12 Score=115.38 Aligned_cols=129 Identities=16% Similarity=0.212 Sum_probs=90.6
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCCCCchHHHHhh
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVTKDMITT 337 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~~~~~~~~i~~ 337 (420)
+++.|+||++|.||+.++++|++.+|.++|.++.+.. ++..++++.++|+++++ +++.+|.+.+......+.+.+++
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p~--k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~~l~~ 80 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENPS--KRGQYLFSAEERLAIIREATAHLANVEAATFSGLLVDFVRR 80 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC-------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHHHHH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCCC--CCCCCCCCHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHH
Confidence 8899999999999999999999999999999986641 11127999999999997 46888987775444467889999
Q ss_pred cCccEEEEcCCcCCCCCCCCCCChH-HHHHhC--C--eEEEeCCC--CCCCHHHHHHHHHhc
Q 014671 338 FNICLVVHGTVSETNTPLTGQSDPY-EVAKSM--G--IFQLLESP--KSITTTSVAQRIIAN 392 (420)
Q Consensus 338 ~~~d~vv~G~d~~~~~~~~~~~d~~-~~~k~~--G--~~~~~~~~--~~~Stt~Ii~RI~~~ 392 (420)
+++++++.|.+...+ + ...... ...+.+ + .+..++.+ ..+|||.|.++|.++
T Consensus 81 l~~~~~v~G~d~~~~-~--~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 81 VGAQAIVKGLRAVSD-Y--EYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp TTCSEEEEEECTTSC-H--HHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred cCCCEEEEeCCcccc-h--HHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 999999999762111 1 000000 012222 1 22233332 469999999998765
No 41
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.41 E-value=1.4e-12 Score=118.76 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=83.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc-ccc----cEEEe-CCC-c
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV----DEVIA-NAP-Y 138 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~-~~V----D~vi~-~~p-~ 138 (420)
++++++|+|||+|.||+.++++|++.+|.++|++.+... ..|..++++.++|++|++.. ... +.++. ..+ +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d~~ 81 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDI 81 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecCcc
Confidence 479999999999999999999999999999998844332 22335678999999999863 222 33332 211 1
Q ss_pred cccH---HHHHHHHhhcCccEEEEcCCCCCCCCCccHHHHHHhC-CeEEEeccCC--CCChHHHHHHHHhc
Q 014671 139 AITE---QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKV-GRYKQIKRTE--GVSSTDIVGRILSS 203 (420)
Q Consensus 139 ~~~~---~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~~lk~~-g~~~~v~r~~--~ISST~Ir~rI~~~ 203 (420)
.... +|++++. ..++.+++|.|+ ....++.. ..+..++..+ .||||.||+++..+
T Consensus 82 ~~~~~w~~~~~~l~--~~~~~~v~gr~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 82 ECNALWVGHIKMLT--PPFDRVYSGNPL--------VQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEECCCHH--------HHHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHC--CCCCEEEECCHH--------HHHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 1111 3444332 367889999774 11233333 3445555433 49999999999865
No 42
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.41 E-value=8.5e-14 Score=123.44 Aligned_cols=124 Identities=23% Similarity=0.311 Sum_probs=83.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC-CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc--cc----ccEEEeCCCcc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KW----VDEVIANAPYA 139 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lg-d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~--~~----VD~vi~~~p~~ 139 (420)
+++++|+||++|.||+.++++|.+++ |+++|++++++...+. ..++++.++|++|++.. +. +..+-+..+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~-~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR-IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccccc-CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 58999999999999999999999997 8999999999865322 36899999999999863 21 22222334443
Q ss_pred ccHHHHHHHHhhcCccEEEEcCCCCCCCCCccHHH-HHHhCC----eEEEeccC-----CCCChHHHHHHHHh
Q 014671 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-LAKKVG----RYKQIKRT-----EGVSSTDIVGRILS 202 (420)
Q Consensus 140 ~~~~fl~~ll~~~~~d~vV~G~D~~~g~~g~~~~~-~lk~~g----~~~~v~r~-----~~ISST~Ir~rI~~ 202 (420)
.+. .-++|++|++.+-.. +..... ..++.| ++..++.. ..||||.||+++.+
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~---~~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYE---MALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHH---HHHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhcc---cHHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 321 247899999977422 111121 223333 34445432 24999999998774
No 43
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=4.5e-12 Score=127.17 Aligned_cols=92 Identities=23% Similarity=0.238 Sum_probs=74.0
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchh--hhhcCC-CCCCcHHHHHHHHhccccccEEEeCCCccc
Q 014671 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE--IIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (420)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~--i~~~K~-~pi~t~eER~~ll~~~~~VD~vi~~~p~~~ 140 (420)
.++.|+++|.|||+|.||+.+|++|++ .+ ++++|.+.+. +. ++ +.+++.++|.++++.+ +||.|++ .||.+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCchh
Confidence 456899999999999999999999999 55 5555555433 32 33 6799999999999997 9999998 55532
Q ss_pred --c-HHHHHH---HHhhcCccEEEEcC
Q 014671 141 --T-EQFMNR---LFNEHKIDYIIHGD 161 (420)
Q Consensus 141 --~-~~fl~~---ll~~~~~d~vV~G~ 161 (420)
+ ++|++. ++.++++++||+|.
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 2 489876 78899999999998
No 44
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.35 E-value=9e-12 Score=112.13 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=79.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEE-ecchhhhhcCCCCCCcHHHHHHHHhc-ccccc-EEEe--CCCcccc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVD-EVIA--NAPYAIT 141 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV-~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD-~vi~--~~p~~~~ 141 (420)
+++++|+|||+|.||+.++++|++.+|.++|++ +.++ ..|..+.++.++|++|++. ++..+ .+.. -..+...
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~ 78 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFN 78 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccH
Confidence 689999999999999999999999999999988 5443 2233346799999999984 44444 3322 1112111
Q ss_pred HHHHHHHHh-hcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEeccCC--CCChHHHHHHHHhc
Q 014671 142 EQFMNRLFN-EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (420)
Q Consensus 142 ~~fl~~ll~-~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~r~~--~ISST~Ir~rI~~~ 203 (420)
..+.+.+.+ ...+++++.|.++ ....+...+ .+...+..+ .||||.||+++..+
T Consensus 79 ~~w~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 79 SIWVSYVESLTPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GGHHHHHHHHSCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 223221111 2356777777542 112233322 334444333 59999999999865
No 45
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.33 E-value=1.9e-12 Score=118.08 Aligned_cols=134 Identities=12% Similarity=0.028 Sum_probs=93.9
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEcCCC----
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPW---- 328 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~~~~---- 328 (420)
++++++.|+||++|.||+.++++|++.+ |.+++.++.+...+ +..++++.+||+++++. ++.+|.+.+....
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~k-~~~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~~~~ 80 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHK-QGRNITSVESRLQMLELATEAEEHFSICLEELSRK 80 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTTC-TTSCCCCHHHHHHHHHHHHTTCTTEEECCTGGGSC
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCCc-cCCCCCCHHHHHHHHHHHhCCCCCEEEehHHhcCC
Confidence 4789999999999999999999999998 99999999876332 22479999999999984 7889998885432
Q ss_pred --CchHHHHhhcCccE------EEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeC-----------------CCCCCCHH
Q 014671 329 --EVTKDMITTFNICL------VVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLE-----------------SPKSITTT 383 (420)
Q Consensus 329 --~~~~~~i~~~~~d~------vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~-----------------~~~~~Stt 383 (420)
..+.+.++.++..+ ++.|.|+..+ +..+. +...+. ..+.+..++ ....+|||
T Consensus 81 ~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~-~~~w~-~~~~l~-~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 81 GPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEY-LPKWY-NIEALL-DLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHH-GGGST-THHHHT-TTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEEEehhhhhh-hhccC-CHHHHH-HhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 45677888887666 9999875332 11222 222222 222222221 12479999
Q ss_pred HHHHHHHhch
Q 014671 384 SVAQRIIANH 393 (420)
Q Consensus 384 ~Ii~RI~~~~ 393 (420)
.|.+++.+..
T Consensus 158 ~IR~~l~~g~ 167 (189)
T 2qtr_A 158 LLRERYKEKK 167 (189)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999987654
No 46
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.31 E-value=1.3e-11 Score=113.35 Aligned_cols=135 Identities=11% Similarity=0.035 Sum_probs=89.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCCC----
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW---- 328 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~~---- 328 (420)
++++++.|+||++|.||+.++++|++.+ |.++++++.+...+ ...++++.+||+++++ +++.+|.+.+....
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 85 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHK-QNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMERE 85 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC----------CHHHHHHHHHHHHTTCTTEEECCGGGSTT
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCCCc-CCcCCCCHHHHHHHHHHHHcCCCCeEEeHHHhcCC
Confidence 4789999999999999999999999988 99999998775321 1247899999999998 58899998884321
Q ss_pred --CchHHHHhhcCcc------EEEEcCCcCCCCCCCCCCChHHHHHhCC---------------eEEEe-CCCCCCCHHH
Q 014671 329 --EVTKDMITTFNIC------LVVHGTVSETNTPLTGQSDPYEVAKSMG---------------IFQLL-ESPKSITTTS 384 (420)
Q Consensus 329 --~~~~~~i~~~~~d------~vv~G~d~~~~~~~~~~~d~~~~~k~~G---------------~~~~~-~~~~~~Stt~ 384 (420)
..+.+.++.++.. +++.|.|+..+ +..|. +...+.+... .+..+ .....+|||.
T Consensus 86 ~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~-~~~W~-~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST~ 163 (194)
T 1kam_A 86 GPSYTFDTVSLLKQRYPNDQLFFIIGADMIEY-LPKWY-KLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTM 163 (194)
T ss_dssp CCCSHHHHHHHHHHHSTTSEEEEEEETTTTTT-CCCCH-HHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHHH
T ss_pred CCCChHHHHHHHHHHCCCCcEEEEEecchhhh-hcccc-CHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHHH
Confidence 3566777776655 99999986554 21111 1111111111 11111 1124799999
Q ss_pred HHHHHHhch
Q 014671 385 VAQRIIANH 393 (420)
Q Consensus 385 Ii~RI~~~~ 393 (420)
|.++|..+.
T Consensus 164 IR~~i~~g~ 172 (194)
T 1kam_A 164 IRERFKSKK 172 (194)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHcCC
Confidence 999987664
No 47
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.31 E-value=4.4e-12 Score=123.53 Aligned_cols=86 Identities=15% Similarity=0.106 Sum_probs=59.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCC-----eEEEEE-ecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEeC--
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGD-----ELVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIAN-- 135 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd-----~LiVgV-~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~~-- 135 (420)
+++++++|+|||+|.||+.++++|++.++ .++|++ .+.+ ....| +++++.++|++|++. +...+.+...
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~-~~~~K-~~l~s~~~R~~ml~~ai~~~~~~~v~~~ 85 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVG-DAYKK-KGLIPAYHRVIMAELATKNSKWVEVDTW 85 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECC-GGGCC-TTCCCHHHHHHHHHHHTTTCSSEEECCT
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCC-CCccc-cCCCCHHHHHHHHHHHhcCCCcEEEecc
Confidence 56889999999999999999999999873 254332 2221 11233 568999999999985 4566666542
Q ss_pred ----CCccccHHHHHHHHhhc
Q 014671 136 ----APYAITEQFMNRLFNEH 152 (420)
Q Consensus 136 ----~p~~~~~~fl~~ll~~~ 152 (420)
..+.+|.+.++.+-+++
T Consensus 86 E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 86 ESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp GGGCSSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcHHHHHHHHHHHH
Confidence 23455667776665556
No 48
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.29 E-value=6.1e-12 Score=123.30 Aligned_cols=131 Identities=14% Similarity=0.079 Sum_probs=94.1
Q ss_pred EEEcCccccCCHHHHHHHHHHHhcCCEE---EEEEecCc--cccC-C-CCCCCCHHHHHHhhhhccccceEEEc---CCC
Q 014671 259 VYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQ--IVRG-S-YHPIMHLHERSLSVLACRYVDEVIIG---APW 328 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak~~gd~L---iVgV~~D~--~v~~-~-~~pi~~~~ER~~~v~~~~~VD~Vvi~---~~~ 328 (420)
|++.|+||.+|.||..+|++|+++++.+ .|.++.|+ .+.+ . +.|+++++||+++++++. ++.|+.+ +.
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a~- 79 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLDFFRIKD- 79 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEECHHHHTT-
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEEhHHhhc-
Confidence 6789999999999999999999988752 35555554 2222 2 348999999999999998 6666654 21
Q ss_pred CchHHHHhh--cCccEEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCC----CCCCCHHHHHHHHHhch
Q 014671 329 EVTKDMITT--FNICLVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES----PKSITTTSVAQRIIANH 393 (420)
Q Consensus 329 ~~~~~~i~~--~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~----~~~~Stt~Ii~RI~~~~ 393 (420)
..+.+|++. ++++++|.|.||.... ...-+...+.+.++.+..++. ...+|||.|.+.|.+..
T Consensus 80 ls~~~Fi~~ill~~~~iVvG~Df~fG~--~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G~ 148 (293)
T 1mrz_A 80 LTPEGFVERYLSGVSAVVVGRDFRFGK--NASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEGR 148 (293)
T ss_dssp CCHHHHHHHHCTTCCEEEEETTCCBSG--GGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhcCCCEEEECCCCCCCC--CCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcCc
Confidence 345778888 9999999999987642 112233344444456666664 35699999998886653
No 49
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.29 E-value=1.8e-13 Score=121.42 Aligned_cols=128 Identities=20% Similarity=0.291 Sum_probs=84.3
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcC-CEEEEEEecCccccCCCCCCCCHHHHHHhhhh-c-cc----cceEEEcCCCCc
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-C-RY----VDEVIIGAPWEV 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~g-d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~-~~----VD~Vvi~~~~~~ 330 (420)
+|++.|+||++|.||+.++++|++++ |.|+|++++|+..+++..|+++.+||+++++. + +. +.-+-+.+++..
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g~ 81 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARARIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYGK 81 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccccCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCCC
Confidence 48899999999999999999999997 99999999998663223599999999988865 4 32 333334555544
Q ss_pred hHHHHhhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCCe----EEEeCC-----CCCCCHHHHHHHHHhchH
Q 014671 331 TKDMITTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMGI----FQLLES-----PKSITTTSVAQRIIANHE 394 (420)
Q Consensus 331 ~~~~i~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~----~~~~~~-----~~~~Stt~Ii~RI~~~~~ 394 (420)
+. .-.+|++|-+.+...+ ........++.|. +..++. ...+|||.|.+++++.+.
T Consensus 82 ~~----~~~~d~ivvs~Et~~~-----~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id~~g 145 (148)
T 3do8_A 82 TL----DVDFEYLVVSPETYEM-----ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEIDRYG 145 (148)
T ss_dssp TT----TSCCSEEEECTTTHHH-----HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC---
T ss_pred CC----CCCCCEEEEChhhccc-----HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHhhcC
Confidence 42 3678889887653221 1112223344555 333332 345999999988877654
No 50
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.26 E-value=1.2e-11 Score=118.65 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=58.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCe----EEEEEecchhhhhcCCCCCCcHHHHHHHHhc-cccccEEEe-----
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE----LVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA----- 134 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~----LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vi~----- 134 (420)
+++++++|+|||+|.||+.++++|++.++. .+|++...+.-...+.+++++.++|++|++. +...+.+..
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 568999999999999999999999998742 4543333332111222468999999999984 444443332
Q ss_pred -CCCccccHHHHHHHHhhc
Q 014671 135 -NAPYAITEQFMNRLFNEH 152 (420)
Q Consensus 135 -~~p~~~~~~fl~~ll~~~ 152 (420)
...+.+|.+.++.+-+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 223456667776665555
No 51
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.24 E-value=5.5e-13 Score=129.51 Aligned_cols=114 Identities=15% Similarity=0.185 Sum_probs=79.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhc-CC--CCCCcHHHHHHHHhccccccEEEeCCCcccc-H
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYAIT-E 142 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~-K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~~~-~ 142 (420)
+|.+.|+||++|.||+.||++|++.+|.++|++..+|.-... .. +.+.++++|+++++++ +||.++....-.+. +
T Consensus 23 ~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~p~~~~m~p~ 101 (280)
T 2ejc_A 23 TIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFHPSVEEMYPP 101 (280)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEECCCHHHHSCT
T ss_pred EEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEeCCHHHCCCc
Confidence 456669999999999999999999999999999666643211 11 3467899999999998 59999972211111 1
Q ss_pred HHH--------HH-HHhhcCccE------------EEEcC-CCCCCCCCccHHHHHHhCCe
Q 014671 143 QFM--------NR-LFNEHKIDY------------IIHGD-DPCLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 143 ~fl--------~~-ll~~~~~d~------------vV~G~-D~~~g~~g~~~~~~lk~~g~ 181 (420)
+|. .+ +..+++|.+ .++|+ |+.||.++.+....++++++
T Consensus 102 ~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~ 162 (280)
T 2ejc_A 102 DFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVR 162 (280)
T ss_dssp TCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHH
T ss_pred CceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHH
Confidence 232 11 112234443 44454 89999999888888887653
No 52
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.23 E-value=6.8e-11 Score=112.79 Aligned_cols=92 Identities=18% Similarity=0.140 Sum_probs=75.8
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCC----
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP---- 327 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~---- 327 (420)
.++++++.|+||++|.||+.++++|++.+ |.++|+++.|... ++.++++.++|+++++ +++.++.|.+...
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~--K~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 99 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPH--RETPQVSAAQRLAMVERAVAGVERLTVDPRELQR 99 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGG--GSCTTCCHHHHHHHHHHHHTTCTTEEECCGGGGS
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCC--CCCCCCCHHHHHHHHHHHhcCCCeEEEeeeeecC
Confidence 36799999999999999999999999988 9999999988522 2247899999999998 5888999888542
Q ss_pred --CCchHHHHhhc----Ccc---EEEEcCC
Q 014671 328 --WEVTKDMITTF----NIC---LVVHGTV 348 (420)
Q Consensus 328 --~~~~~~~i~~~----~~d---~vv~G~d 348 (420)
...+.+.++.+ +|+ +++.|.|
T Consensus 100 ~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 100 DKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 24677877665 677 7899975
No 53
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.20 E-value=4.8e-11 Score=111.32 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=72.9
Q ss_pred eE-EEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcCC-----
Q 014671 257 RV-VYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP----- 327 (420)
Q Consensus 257 ~i-V~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~~----- 327 (420)
+| +++.|+||++|.||+.++++|++.+ |.+++.++.+... ++.++++.+||+++++ +++.+|.|.+...
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~--k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 80 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPH--RPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTT--SCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCC--CCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhcCC
Confidence 46 8999999999999999999999987 8999988877533 2237999999999997 7889999888531
Q ss_pred -CCchHHHHhhc----Ccc---EEEEcCC
Q 014671 328 -WEVTKDMITTF----NIC---LVVHGTV 348 (420)
Q Consensus 328 -~~~~~~~i~~~----~~d---~vv~G~d 348 (420)
...+.++++.+ +|+ +++.|.|
T Consensus 81 ~~s~t~~~l~~l~~~~~~~~~~~~i~G~D 109 (213)
T 1k4m_A 81 APSYTAQTLKEWRQEQGPDVPLAFIIGQD 109 (213)
T ss_dssp SCCCHHHHHHHHHHHHCTTSCEEEEEEHH
T ss_pred CCCcHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 13456777665 899 9999985
No 54
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.11 E-value=4.9e-10 Score=112.33 Aligned_cols=129 Identities=21% Similarity=0.221 Sum_probs=82.8
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhh-----hhcCCCCCCcHHHHHHHHhc-cccccE-EE----
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSG-LKWVDE-VI---- 133 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i-----~~~K~~pi~t~eER~~ll~~-~~~VD~-vi---- 133 (420)
++++++.|+|||+|.||+.++++|.+++|+|+|+|.+++.. ...+.+..++.+||++|++. ++..+. +.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~ 81 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHL 81 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEe
Confidence 35799999999999999999999999999999999999853 11121234999999999974 444332 11
Q ss_pred eCCCccc---c----HHHHHHHHh--hcCccEEEEcCCCCCCCCCccHHHHHHhCC-eEEEec--c-CCCCChHHHHHHH
Q 014671 134 ANAPYAI---T----EQFMNRLFN--EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRI 200 (420)
Q Consensus 134 ~~~p~~~---~----~~fl~~ll~--~~~~d~vV~G~D~~~g~~g~~~~~~lk~~g-~~~~v~--r-~~~ISST~Ir~rI 200 (420)
.+.+... . .+.+..++. .+++++++.++++. .....+..+ +.+.++ + ...||||.||+..
T Consensus 82 ~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 82 VEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp ECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred ccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 1111111 0 122333444 36788777665531 112333443 445554 2 3479999999864
No 55
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.09 E-value=1.6e-10 Score=105.18 Aligned_cols=131 Identities=13% Similarity=0.074 Sum_probs=86.5
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccc--eEEEcC------
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVD--EVIIGA------ 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD--~Vvi~~------ 326 (420)
+++++..|+|||+|.||+.+++ |.+..|.|+++++.+. ..+++.++.++|++|++. ++..+ .+.+..
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWGKNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 5799999999999999999998 7777799999999862 133579999999988865 44432 344321
Q ss_pred --C-CCchHHHHhhc---Ccc---EEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCCCCCCCHHHHHHHHHhch
Q 014671 327 --P-WEVTKDMITTF---NIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 327 --~-~~~~~~~i~~~---~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
. ...|.+.++.+ -|+ +++.|.|.-.+ +..|. +...+.+.. .++.+++..++|+|.|.++|.+++
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~-l~~W~-~~~~l~~~~-~~vv~~r~~~iSST~IR~~i~~g~ 150 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFK-FAKFY-KAEEITERW-TVMACPEKVKIRSTDIRNALIEGK 150 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHT-GGGST-THHHHHHHS-EEEECCCSSCCCHHHHHHHHHHTC
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhh-cccch-hHHHHHHhC-CEEEEcCCCCCcHHHHHHHHHcCC
Confidence 1 22344444433 344 57889874332 22232 344455554 455677788999999999998764
No 56
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.08 E-value=3.2e-10 Score=103.72 Aligned_cols=134 Identities=15% Similarity=0.097 Sum_probs=90.0
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhh-hccccceEEEcC------
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA------ 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~------ 326 (420)
++++++.|+||++|.||+.++++|++.+ |.+++..+.+...+ +..++++.++|+++++ +++..+.|.+..
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k-~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~~ 80 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLK-KHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRG 80 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTTS-CCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHHC
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCCC-cCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcCC
Confidence 3689999999999999999999999887 88888777665332 2247899999999987 578888777742
Q ss_pred CCCchHHHHhhc---Ccc---EEEEcCCcCCCCCCCCCCChHHHHHhCCeEEEeCC-----------------CCCCCHH
Q 014671 327 PWEVTKDMITTF---NIC---LVVHGTVSETNTPLTGQSDPYEVAKSMGIFQLLES-----------------PKSITTT 383 (420)
Q Consensus 327 ~~~~~~~~i~~~---~~d---~vv~G~d~~~~~~~~~~~d~~~~~k~~G~~~~~~~-----------------~~~~Stt 383 (420)
....+.+.++.+ .|+ +++.|.|...+ +..|. +...+.+.... ..+++ ..++|+|
T Consensus 81 ~~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~-~~~W~-~~~~i~~~~~~-~v~~R~~~~~~~~~~i~~~~~~~~~ISST 157 (189)
T 2h29_A 81 GQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQ-LEKWY-QIEYLKEMVTF-VVVNRDKNSQNVENAMIAIQIPRVDISST 157 (189)
T ss_dssp SBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTT-GGGST-THHHHHHHCEE-EEECCSSSCCCCCTTSEEECCCCBCCCHH
T ss_pred CCCCHHHHHHHHHHHCCCCcEEEEEecchhhh-hcccc-CHHHHHhhCcE-EEEECCCCccccCCcEEEEcCCCCccCHH
Confidence 122455555533 366 89999875333 22222 12223333221 11211 2469999
Q ss_pred HHHHHHHhch
Q 014671 384 SVAQRIIANH 393 (420)
Q Consensus 384 ~Ii~RI~~~~ 393 (420)
.|.+++..+.
T Consensus 158 ~IR~~i~~g~ 167 (189)
T 2h29_A 158 MIRQRVSEGK 167 (189)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999987653
No 57
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.05 E-value=6.6e-10 Score=110.91 Aligned_cols=134 Identities=15% Similarity=0.121 Sum_probs=94.8
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCE---EEEEEecCccccC----C--CCCCCCHHHHHHhhhhccccceEEEcC
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF---LLVGIYTDQIVRG----S--YHPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~---LiVgV~~D~~v~~----~--~~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
..+|++-|+||.+|.||..+|++|++.++. ..|+++.|+.-.. . +.++++++||+++++++. ||.|++..
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g-VD~v~v~~ 93 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG-IDGVLVID 93 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC-CCEEEEcc
Confidence 357999999999999999999999998764 4788888774321 2 247999999999999987 99998743
Q ss_pred C-----CCchHHHHhh-----cCccEEEEcCCcCCCCCCCCCCChHHH---HHhCC-eEEEeCC----CCCCCHHHHHHH
Q 014671 327 P-----WEVTKDMITT-----FNICLVVHGTVSETNTPLTGQSDPYEV---AKSMG-IFQLLES----PKSITTTSVAQR 388 (420)
Q Consensus 327 ~-----~~~~~~~i~~-----~~~d~vv~G~d~~~~~~~~~~~d~~~~---~k~~G-~~~~~~~----~~~~Stt~Ii~R 388 (420)
. ...+.+|++. ++++.+|.|.|+....- ..-+...+ .+. | .+..++. ...+|||.|.+.
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~--r~g~~~~L~~~~~~-g~~V~~v~~~~~~~~~ISST~IR~~ 170 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGEN--AAGTADSLRQICQS-RLTVDVIDLLDDEGVRISSTTVREF 170 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGG--GCEEHHHHHHHTTT-TSEEEEECCCEETTEECSHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCC--CCCCHHHHHHHhcC-CeEEEEECcEecCCcccccchHHHH
Confidence 2 1235667765 68999999999865421 11122222 223 4 3445554 346999999988
Q ss_pred HHhch
Q 014671 389 IIANH 393 (420)
Q Consensus 389 I~~~~ 393 (420)
|.+..
T Consensus 171 L~~G~ 175 (338)
T 2x0k_A 171 LSEGD 175 (338)
T ss_dssp HHTTC
T ss_pred HhcCc
Confidence 76654
No 58
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.03 E-value=1.7e-09 Score=98.35 Aligned_cols=125 Identities=18% Similarity=0.133 Sum_probs=81.8
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-cccc----ceEEEc--CCCC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYV----DEVIIG--APWE 329 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~V----D~Vvi~--~~~~ 329 (420)
+++++.|+||++|.||+.++++|++.+|.++|++.++..-. ++.++++.+||+++++. +... |.+.+. +...
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~p~-~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d~~~ 82 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQLSH-SIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDIE 82 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCS-SSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCS
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCCCc-CCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecCccC
Confidence 58999999999999999999999999999999995543221 23467899999998876 4544 455442 2111
Q ss_pred ---chHHHHhhc--CccEEEEcCCcCCCCCCCCCCChHHHHHhCCe-EEEeCCCC--CCCHHHHHHHHHhch
Q 014671 330 ---VTKDMITTF--NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLESPK--SITTTSVAQRIIANH 393 (420)
Q Consensus 330 ---~~~~~i~~~--~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~~~~~~--~~Stt~Ii~RI~~~~ 393 (420)
...++++++ ..++++-|.++. ....+..|. +..++... .+|+|.|.+++..+.
T Consensus 83 ~~~~w~~~~~~l~~~~~~~v~gr~~~-----------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G~ 143 (181)
T 1ej2_A 83 CNALWVGHIKMLTPPFDRVYSGNPLV-----------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDDG 143 (181)
T ss_dssp CHHHHHHHHHHHSCCCSEEECCCHHH-----------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCCCCCEEEECCHHH-----------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcCC
Confidence 223344443 456777665420 112233443 33444322 499999999987653
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.02 E-value=1.5e-09 Score=107.68 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=81.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc-c-----cc-EEEeCCC
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-W-----VD-EVIANAP 137 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~-~-----VD-~vi~~~p 137 (420)
+++++++|+||++|.||+.++++|.+++|.++|+|.+++.. .+..+.++.++|++|++..- . .. .++....
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d 84 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLAD 84 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCC
Confidence 46899999999999999999999999999999999987632 12246789999999998531 1 11 1222111
Q ss_pred c----cccHHHHHHHHhh---cCccEEEEcCCCCCCCCCccHHHHHHhCC--eEEEeccCCCCChHHHHHHHHh
Q 014671 138 Y----AITEQFMNRLFNE---HKIDYIIHGDDPCLLPDGTDAYALAKKVG--RYKQIKRTEGVSSTDIVGRILS 202 (420)
Q Consensus 138 ~----~~~~~fl~~ll~~---~~~d~vV~G~D~~~g~~g~~~~~~lk~~g--~~~~v~r~~~ISST~Ir~rI~~ 202 (420)
+ ....+++.+.+.+ +.++++++|..- +...+ .+.-.. .....+....+|||.||+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~-----~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 85 YFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK-----DSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp CTTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS-----SSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHHHHhcccCCeEEEEcCCC-----Ccchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 1 1112444332221 235677777431 11222 222221 1223334457999999999985
No 60
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.01 E-value=4.3e-10 Score=112.76 Aligned_cols=69 Identities=23% Similarity=0.291 Sum_probs=56.0
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccc-----cCCC-CCCCCHHHHHHhhh-hccccce-EEE
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIV-----RGSY-HPIMHLHERSLSVL-ACRYVDE-VII 324 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v-----~~~~-~pi~~~~ER~~~v~-~~~~VD~-Vvi 324 (420)
++++++.|+|||+|.||+.++++|++++|+|+|++++++.- +..+ ++.++.+||++|++ +++..+. |.+
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v 78 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFI 78 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEE
Confidence 57899999999999999999999999999999999999853 1121 33499999999995 5676655 444
No 61
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.01 E-value=1.5e-09 Score=106.83 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=93.7
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEE---EEEEecCccccC--------CCCCCCCHHHHHHhhhhccccceEEE
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVRG--------SYHPIMHLHERSLSVLACRYVDEVII 324 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~L---iVgV~~D~~v~~--------~~~pi~~~~ER~~~v~~~~~VD~Vvi 324 (420)
...|++-|.||.+|.||..+|++|+++++.+ .|.++-|+.-+. .+.++++++||.++++++. ||.+++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEE
Confidence 4689999999999999999999999988653 555665652221 1237999999999999998 999988
Q ss_pred cCCC-----CchHHHH----hhcCccEEEEcCCcCCCCCCCCCCChHHHHHhCC--eEEEeCC----CCCCCHHHHHHHH
Q 014671 325 GAPW-----EVTKDMI----TTFNICLVVHGTVSETNTPLTGQSDPYEVAKSMG--IFQLLES----PKSITTTSVAQRI 389 (420)
Q Consensus 325 ~~~~-----~~~~~~i----~~~~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G--~~~~~~~----~~~~Stt~Ii~RI 389 (420)
-+.. ..+.+|+ ++++++.+|.|.||.... .....+ . ++..| .+..++. ...+|||.|.+-|
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~--~-L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L 174 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAE--D-LKNYFDGEVIIVPPVEDEKGKISSTRIRQAI 174 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCST--T-HHHHCSSEEEEECCCBCSSCBCCHHHHHHHH
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHH--H-HHHhCCCCEEEeCCEecCCceEeHHHHHHHH
Confidence 4321 1234444 478999999999987653 222221 1 22223 3555553 4569999999988
Q ss_pred Hhch
Q 014671 390 IANH 393 (420)
Q Consensus 390 ~~~~ 393 (420)
.+..
T Consensus 175 ~~G~ 178 (308)
T 3op1_A 175 LDGN 178 (308)
T ss_dssp HHTC
T ss_pred HcCC
Confidence 7654
No 62
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.00 E-value=4e-09 Score=94.69 Aligned_cols=124 Identities=20% Similarity=0.245 Sum_probs=77.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccc-eEEE--cCCCC---c
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVD-EVII--GAPWE---V 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD-~Vvi--~~~~~---~ 330 (420)
++++.|+||++|.||+.++++|++.+|.++|+|.+...-. ++.+.++.++|+++++. ++..+ .+.+ .+.+. .
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~p~-~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~~~ 80 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQKSH-TLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFNSI 80 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCS-SSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCGGG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccHHH
Confidence 6899999999999999999999999999999994432211 23356799999998874 66665 4433 22221 1
Q ss_pred hHHHHhhc--CccEEEEcCCcCCCCCCCCCCChHHHHHhCCe-EEEeCCCC--CCCHHHHHHHHHhch
Q 014671 331 TKDMITTF--NICLVVHGTVSETNTPLTGQSDPYEVAKSMGI-FQLLESPK--SITTTSVAQRIIANH 393 (420)
Q Consensus 331 ~~~~i~~~--~~d~vv~G~d~~~~~~~~~~~d~~~~~k~~G~-~~~~~~~~--~~Stt~Ii~RI~~~~ 393 (420)
..+.++++ ..++++.|.++ ...+....|+ +...+... .+|+|.|.+++..+.
T Consensus 81 w~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g~ 137 (168)
T 1f9a_A 81 WVSYVESLTPPFDIVYSGNPL-----------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNGE 137 (168)
T ss_dssp HHHHHHHHSCCCSEEECCCHH-----------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHTC
T ss_pred HHHHHHHhccCCCEEEECcHH-----------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcCC
Confidence 23333332 34555544321 0122233443 33333322 499999999987653
No 63
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.91 E-value=3.4e-09 Score=104.40 Aligned_cols=128 Identities=14% Similarity=0.191 Sum_probs=84.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-ccc--ce--EEEcCCCC-
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYV--DE--VIIGAPWE- 329 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~V--D~--Vvi~~~~~- 329 (420)
++++++.|+||++|.||+.++++|++.+|.++|+|.++..-. ++...++.++|+.|++.. ... +. +++++..-
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p~-~~~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~d~~~ 85 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAA-DTRNPWRSPERMAMIEACLSPQILKRVHFLTVRDWLY 85 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCCC-CSSSCSCHHHHHHHHHTTSCHHHHTTEEEEEEECCTT
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccCC-CCCCCCCHHHHHHHHHHHhhhccCCeEEEEECCCCcC
Confidence 579999999999999999999999999999999999885332 233458999999998754 443 22 33343321
Q ss_pred ---chHH----HHhhcC---ccEEEEcCCcCCCCCCCCCCChHHHHHhC-C-eEEEeCCCCCCCHHHHHHHHHhch
Q 014671 330 ---VTKD----MITTFN---ICLVVHGTVSETNTPLTGQSDPYEVAKSM-G-IFQLLESPKSITTTSVAQRIIANH 393 (420)
Q Consensus 330 ---~~~~----~i~~~~---~d~vv~G~d~~~~~~~~~~~d~~~~~k~~-G-~~~~~~~~~~~Stt~Ii~RI~~~~ 393 (420)
...+ +++.+. .++++-|.+..... + ..+.. | ....++....+|+|.|.+++.+..
T Consensus 86 ~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~--------~-~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g~ 152 (341)
T 2qjo_A 86 SDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASS--------Y-YLNLFPQWDYLETGHYPDFSSTAIRGAYFEGK 152 (341)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGG--------G-GGGSCTTSEEEECCCCTTCCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCCh--------H-HHHhccccceeecccCCCCCcHHHHHHHHcCC
Confidence 0122 333332 56777786542210 0 11122 3 344555567899999999987654
No 64
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.87 E-value=1.3e-10 Score=112.51 Aligned_cols=128 Identities=20% Similarity=0.219 Sum_probs=89.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhh-cCC--CCCCcHHHHHHHHhccccccEEEeCCCcc-c
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKG--PPVLSMEERLALVSGLKWVDEVIANAPYA-I 140 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~-~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~~-~ 140 (420)
-..|.+.|+ +|.||+.||++|++.++.++|.+..+|.-.. ... +.+.++++|.++++++ +||.++.. +++ +
T Consensus 19 i~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~p-~f~~m 93 (276)
T 1v8f_A 19 VGFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFAP-GVEEM 93 (276)
T ss_dssp EEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEECC-CHHHH
T ss_pred ceEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEeC-ChHhC
Confidence 456889999 9999999999999999999999999886422 221 4689999999999997 79999962 221 1
Q ss_pred c-HHHHHHHHhhcCccEEEEcC----------------------C-CCCCCCCccHHHHHHhCCe-----EEEe--c--c
Q 014671 141 T-EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR-----YKQI--K--R 187 (420)
Q Consensus 141 ~-~~fl~~ll~~~~~d~vV~G~----------------------D-~~~g~~g~~~~~~lk~~g~-----~~~v--~--r 187 (420)
. ++|...++...+++.+++|. | +.||.++.+....+++.++ +.++ + +
T Consensus 94 ~p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr 173 (276)
T 1v8f_A 94 YPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVR 173 (276)
T ss_dssp SCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCB
T ss_pred CCcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEE
Confidence 1 12322111112344555666 8 9999998888888887653 2222 3 3
Q ss_pred C-CC--CChHHHH
Q 014671 188 T-EG--VSSTDIV 197 (420)
Q Consensus 188 ~-~~--ISST~Ir 197 (420)
. .| +|||.++
T Consensus 174 ~~dGlaiSSrnir 186 (276)
T 1v8f_A 174 EEDGLALSSRNVY 186 (276)
T ss_dssp CTTSCBCCGGGGG
T ss_pred cCCCCEeEEeEEE
Confidence 2 33 8999886
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.85 E-value=9.8e-09 Score=101.76 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=51.2
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhh
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLA 315 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~ 315 (420)
++++++.|+|||+|.||+.++++|++++|.|+|+|.++..-. ++++.++.+||++|++.
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~~-~~~~~~~~~~R~~m~~~ 65 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTP-NIKNPFSFEQRKQMIES 65 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCCC-CSSSCSCHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCCc-ccCCCCCHHHHHHHHHH
Confidence 478999999999999999999999999999999999976332 33467899999988865
No 66
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.71 E-value=1.9e-09 Score=104.70 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=81.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhh-cCC--CCCCcHHHHHHHHhccccccEEEeCCCc-ccc-H
Q 014671 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKG--PPVLSMEERLALVSGLKWVDEVIANAPY-AIT-E 142 (420)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~-~K~--~pi~t~eER~~ll~~~~~VD~vi~~~p~-~~~-~ 142 (420)
|.+.|. +|.||+.||++|++.++.++|.+..+|.-.. ... ..+.+.+++.++++.+ +||.++.. ++ .+. +
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~p-~~~~myp~ 102 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFHP-AVEDMYPG 102 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEECC-CHHHHSCS
T ss_pred EECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCCCC
Confidence 459997 9999999999999999988888888875322 221 4588999999999997 89999972 22 111 1
Q ss_pred HH--------HHH-HHhhcCcc-------------EEEEcCCCCCCCCCccHHHHHHhCCe
Q 014671 143 QF--------MNR-LFNEHKID-------------YIIHGDDPCLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 143 ~f--------l~~-ll~~~~~d-------------~vV~G~D~~~g~~g~~~~~~lk~~g~ 181 (420)
+| +.+ +...++|. .+|.|+|+.||.+..+....++++++
T Consensus 103 ~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~ 163 (283)
T 3ag6_A 103 ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVK 163 (283)
T ss_dssp SCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHH
T ss_pred CceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHH
Confidence 23 222 12237888 89999999999999888888887653
No 67
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.70 E-value=3.6e-08 Score=94.33 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=58.7
Q ss_pred CeEEEEcCccccCCHHHHHHHHHHHhcCCE----EEEEEecCccccC-CCCCCCCHHHHHHhhh-hccccceEEEcC---
Q 014671 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF----LLVGIYTDQIVRG-SYHPIMHLHERSLSVL-ACRYVDEVIIGA--- 326 (420)
Q Consensus 256 ~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~----LiVgV~~D~~v~~-~~~pi~~~~ER~~~v~-~~~~VD~Vvi~~--- 326 (420)
++++++.|+||++|.||+.++++|++.++. .+||+.-...... .+.++++.++|++|++ +++..+.+.+.+
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 578999999999999999999999987643 6776443333222 3347899999998886 567767776632
Q ss_pred ---CCCchHHHHhhc
Q 014671 327 ---PWEVTKDMITTF 338 (420)
Q Consensus 327 ---~~~~~~~~i~~~ 338 (420)
.+..|.+.++.+
T Consensus 86 ~~~~~syTidtL~~l 100 (252)
T 1nup_A 86 EQAQWMETVKVLRHH 100 (252)
T ss_dssp HSSSCCCHHHHHHHH
T ss_pred cCCCCCCHHHHHHHH
Confidence 234455555444
No 68
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.67 E-value=3.4e-08 Score=96.00 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=53.3
Q ss_pred CCCeEEEEcCccccCCHHHHHHHHHHHhcCC-----EEEEEEecCccccCCCCCCCCHHHHHHhhhh-ccccceEEEc
Q 014671 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGD-----FLLVGIYTDQIVRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 325 (420)
Q Consensus 254 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd-----~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~-~~~VD~Vvi~ 325 (420)
+..+++++.|+||++|.||+.++++|++.++ .++|++..-......+.++++.++|++|++. +...+.+.+.
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~~~~~~~v~ 83 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVD 83 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTTTCSSEEEC
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhcCCCcEEEe
Confidence 3467899999999999999999999998763 3666543221111233478999999999864 5778888774
No 69
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.58 E-value=7.2e-08 Score=93.58 Aligned_cols=70 Identities=16% Similarity=0.282 Sum_probs=57.7
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEec--CccccCC--CCCCCCHHHHHHhhhhccccceEEEcC
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYT--DQIVRGS--YHPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~--D~~v~~~--~~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
+++++++ |+||.+|.||+.+|++|++.+|.+||++.. +++.... ...+.++++|+++++++. ||.|+...
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~G-VD~vf~p~ 94 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKEN-VDCIFHPS 94 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTT-CSEEECCC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCC-CCEEEeCC
Confidence 5678888 899999999999999999999999999954 4444331 234678999999999998 99999853
No 70
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.53 E-value=1.1e-08 Score=99.97 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=77.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHH-hCCeEEEEEecchhhhhcCC---CCCCcHHHHHHHHhccccccEEEeCCCc-ccc
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPY-AIT 141 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~-lgd~LiVgV~sd~~i~~~K~---~pi~t~eER~~ll~~~~~VD~vi~~~p~-~~~ 141 (420)
+|-+..++..+|.||+.||++|++ .++.++|.+..+|.-...+. ..+.++++++++++.+ +||.++.. ++ .+.
T Consensus 34 ~vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~p-~~~~my 111 (301)
T 3cov_A 34 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFTP-TTAAMY 111 (301)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEECC-CHHHHC
T ss_pred cEEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCC
Confidence 344444555599999999999999 99988888888875322222 3588999999999997 89999972 22 111
Q ss_pred -HHHHHHHHhhcCccEEEEcC-----------------------CCCCCCCCccHHHHHHhCCe
Q 014671 142 -EQFMNRLFNEHKIDYIIHGD-----------------------DPCLLPDGTDAYALAKKVGR 181 (420)
Q Consensus 142 -~~fl~~ll~~~~~d~vV~G~-----------------------D~~~g~~g~~~~~~lk~~g~ 181 (420)
++|...+... ++..+++|. |+.||.+..+....++++++
T Consensus 112 P~~f~~~v~~~-~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~ 174 (301)
T 3cov_A 112 PDGLRTTVQPG-PLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVA 174 (301)
T ss_dssp TTCSCSEEECC-GGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH
T ss_pred CCCceEEEecC-CcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHH
Confidence 1232211111 345566777 99999999888888887654
No 71
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.34 E-value=2.8e-06 Score=84.94 Aligned_cols=133 Identities=15% Similarity=0.127 Sum_probs=84.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc-cc---cEE-EeCCCccc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPYAI 140 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~-~V---D~v-i~~~p~~~ 140 (420)
++|++.|+||++|.||..++++|.+.+|.+++-+.-.+ .| +--.+.+.|+++++.+- .. +.+ +...|+.+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 230 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHh
Confidence 46888999999999999999999999998776665332 23 45689999999998631 11 112 22233332
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC--CC-CCCccHHHHHHhCC----eEEEecc--------------------
Q 014671 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC--LL-PDGTDAYALAKKVG----RYKQIKR-------------------- 187 (420)
Q Consensus 141 ~-----~~fl~~ll-~~~~~d~vV~G~D~~--~g-~~g~~~~~~lk~~g----~~~~v~r-------------------- 187 (420)
. +..+..++ +.++|.++++|.|.. .. .+..+.-+.++... ++..+++
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~p~~~ 310 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTCPEGH 310 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTSCGGG
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEccccCccC
Confidence 1 23355544 458999999999974 11 22233333444431 3222111
Q ss_pred C---CCCChHHHHHHHHhc
Q 014671 188 T---EGVSSTDIVGRILSS 203 (420)
Q Consensus 188 ~---~~ISST~Ir~rI~~~ 203 (420)
. -.||||+||+++.++
T Consensus 311 ~~~~~~ISgT~iR~~L~~G 329 (349)
T 1v47_A 311 REKRTAISMTKVRALLREG 329 (349)
T ss_dssp GGGCEECCHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHCc
Confidence 0 138999999999876
No 72
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.34 E-value=5e-06 Score=84.44 Aligned_cols=133 Identities=17% Similarity=0.108 Sum_probs=84.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc-cc---cEE-EeCCCc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPY 138 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~lg--d~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~-~V---D~v-i~~~p~ 138 (420)
++|++.|+||++|.||..++++|.+.. |.|++.+.-.+ .| +--.+.+.|+++++.+- .. +.+ +...|+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~ 267 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 267 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechH
Confidence 468889999999999999999999987 77666555432 23 45688999999988631 11 111 111223
Q ss_pred cc-----cHHHHHHHH-hhcCccEEEEcCCCC---CCCCCccHHHHHHhC-------CeEEEecc---------------
Q 014671 139 AI-----TEQFMNRLF-NEHKIDYIIHGDDPC---LLPDGTDAYALAKKV-------GRYKQIKR--------------- 187 (420)
Q Consensus 139 ~~-----~~~fl~~ll-~~~~~d~vV~G~D~~---~g~~g~~~~~~lk~~-------g~~~~v~r--------------- 187 (420)
.+ ++..+..++ +.+++.++++|.|.. ...+..+..+.++.. .+++.+++
T Consensus 268 ~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~~ 347 (396)
T 1jhd_A 268 DMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMRD 347 (396)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGGG
T ss_pred HhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCeEEEccc
Confidence 22 123344444 458999999999974 123333444455542 23333322
Q ss_pred -----C---CCCChHHHHHHHHhc
Q 014671 188 -----T---EGVSSTDIVGRILSS 203 (420)
Q Consensus 188 -----~---~~ISST~Ir~rI~~~ 203 (420)
. -.||||+||+++.++
T Consensus 348 ~p~~~~~~~~~ISgT~IR~~L~~G 371 (396)
T 1jhd_A 348 VPDHTKEDFVLLSGTKVREMLGQG 371 (396)
T ss_dssp CTTCCGGGEECCCHHHHHHHHHTT
T ss_pred cCcccCCCccccCHHHHHHHHHCC
Confidence 0 149999999999876
No 73
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.24 E-value=3.4e-06 Score=84.49 Aligned_cols=90 Identities=13% Similarity=0.238 Sum_probs=70.2
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcc--ccCCCCCCCCHHHHHHhhhhccccceEEEcCCC--Cc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI--VRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW--EV 330 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~--v~~~~~pi~~~~ER~~~v~~~~~VD~Vvi~~~~--~~ 330 (420)
++++|.+=|.||+||.||..+|++|++ .+ ++++|-+-.. +.+|...+++..+|+++++.+ .||.|+.-+.. ..
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~-GvD~vielpF~~~~s 127 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSGRGIPYFLNRYIRAEMAIRA-GADIVVEGPPMGIMG 127 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHH-TCSEEEECCCGGGSC
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHC-CCCEEEEcCchhhCC
Confidence 457899999999999999999999999 55 5666665444 555555899999999999998 79999885431 13
Q ss_pred hHHHHh-------hcCccEEEEcC
Q 014671 331 TKDMIT-------TFNICLVVHGT 347 (420)
Q Consensus 331 ~~~~i~-------~~~~d~vv~G~ 347 (420)
+.+|++ .++++.+|.|.
T Consensus 128 ~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 128 SGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEECC
Confidence 345554 58999999997
No 74
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.51 E-value=0.00013 Score=70.41 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=55.6
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhh-hcCC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
+|-+..++.++|.||+.|+++|++.+|.++|.+..+|.-. +... +.+.++++++++++.+ +||.++.
T Consensus 23 ~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 23 RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 5777789999999999999999999998888888777532 1222 5688999999999997 8998885
No 75
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=96.98 E-value=0.0019 Score=62.37 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=53.6
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-C---CCCCCCHHHHHHhhhhccccceEEEc
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-S---YHPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~---~~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
.|.+-|. +|.||..++++|++.+|.++|.+..++.--. + ...+.++++|.+.++++. ||.|+..
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~p 88 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFAP 88 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEECC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEeC
Confidence 4667787 9999999999999999999999999875433 2 236899999999999986 9998874
No 76
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=96.96 E-value=0.002 Score=63.02 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=55.8
Q ss_pred HhhcccCCCCceEEE--EecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhh-hhcCC--CCCCcHHHHHHHHhccccc
Q 014671 55 FHKKKCGKKKRVRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWV 129 (420)
Q Consensus 55 ~~~~~~~~~~~~~V~--~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i-~~~K~--~pi~t~eER~~ll~~~~~V 129 (420)
....|++++ .++++ |.| .+|.||+.|+++|++.+|.++|.+.-+|.= .+... ...-++++.++++++. +|
T Consensus 34 ~~~~~r~~g-~~IgfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-Gv 108 (314)
T 3inn_A 34 ALAPARQQG-KKIGFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QV 108 (314)
T ss_dssp HHHHHHHTT-CCEEEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TC
T ss_pred HHHHHHHcC-CeEEEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CC
Confidence 344444433 35566 777 599999999999999999999998877742 22222 4567899999999986 89
Q ss_pred cEEEe
Q 014671 130 DEVIA 134 (420)
Q Consensus 130 D~vi~ 134 (420)
|.|+.
T Consensus 109 D~vF~ 113 (314)
T 3inn_A 109 DYLFA 113 (314)
T ss_dssp SEEEC
T ss_pred CEEEC
Confidence 98875
No 77
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.63 E-value=0.0059 Score=59.11 Aligned_cols=67 Identities=16% Similarity=0.285 Sum_probs=53.8
Q ss_pred CCeEEE--EcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEc
Q 014671 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 255 ~~~iV~--~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
+++|++ +-|. +|.||..++++|++.+|.++|.+..++.--. +. ..+.+++++.+.++++. ||.|+..
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~p 94 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFHP 94 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEECC
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeC
Confidence 456766 7786 9999999999999999999999988864432 21 24788999999988875 9988874
No 78
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.45 E-value=0.0031 Score=60.98 Aligned_cols=39 Identities=23% Similarity=0.569 Sum_probs=34.9
Q ss_pred CCCeEEE--EcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcc
Q 014671 254 PNARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295 (420)
Q Consensus 254 ~~~~iV~--~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~ 295 (420)
.+++|++ +-|+ +|.||+.++++|++.||.+||+|.-++.
T Consensus 23 ~g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~ 63 (287)
T 3q12_A 23 EGKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPL 63 (287)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGG
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcc
Confidence 3578888 7797 9999999999999999999999998864
No 79
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.40 E-value=0.0038 Score=60.34 Aligned_cols=74 Identities=18% Similarity=0.153 Sum_probs=51.4
Q ss_pred hhcccCCCCceEEE--EecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhh-hcCC--CCCCcHHHHHHHHhcccccc
Q 014671 56 HKKKCGKKKRVRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVD 130 (420)
Q Consensus 56 ~~~~~~~~~~~~V~--~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD 130 (420)
...|++++ .++++ |.|+ +|-||+.|+++|++.+|.++|++.-+|.=. .... ...-++++=++++++. +||
T Consensus 17 ~~~~r~~g-~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~-gvd 91 (287)
T 3q12_A 17 IRRWRQEG-KRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH-GAD 91 (287)
T ss_dssp HHHHHHTT-CCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH-TCS
T ss_pred HHHHHHcC-CeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCC
Confidence 34444433 35666 8896 999999999999999999999987766311 1011 2334567777778775 889
Q ss_pred EEEe
Q 014671 131 EVIA 134 (420)
Q Consensus 131 ~vi~ 134 (420)
.|+.
T Consensus 92 ~vF~ 95 (287)
T 3q12_A 92 LVFA 95 (287)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8875
No 80
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=96.12 E-value=0.012 Score=57.48 Aligned_cols=62 Identities=16% Similarity=0.276 Sum_probs=49.2
Q ss_pred ccccCCHHHHHHHHHHHh-cCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEcC
Q 014671 264 AFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIGA 326 (420)
Q Consensus 264 ~FDl~H~GHi~~L~~Ak~-~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~~ 326 (420)
++.-+|.||..++++|++ .+|.+||.+..++.--. +. ....+++++.+.++++. ||.|+...
T Consensus 40 TmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~p~ 106 (301)
T 3cov_A 40 TMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFTPT 106 (301)
T ss_dssp ECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEECCC
T ss_pred cCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeCC
Confidence 333499999999999999 99999999998874432 21 24788999999988886 89888743
No 81
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=95.62 E-value=0.028 Score=54.92 Aligned_cols=68 Identities=22% Similarity=0.341 Sum_probs=50.4
Q ss_pred CCCeEEE--EcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEc
Q 014671 254 PNARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 254 ~~~~iV~--~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
.+++|++ +-|. +|.||+.++++|++.+|.+||.|..++.=-. +. +-.-++++....+++. .||.|...
T Consensus 41 ~g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF~P 114 (314)
T 3inn_A 41 QGKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLFAP 114 (314)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEECC
T ss_pred cCCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEECC
Confidence 4578888 7785 9999999999999999999999998875332 11 1345666667766665 48866543
No 82
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=95.28 E-value=0.034 Score=53.68 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=44.8
Q ss_pred EecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhh-hhcCC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 70 MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 70 ~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i-~~~K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
|.|. +|-||+.|+++|++ +|.++|.+.-+|.= .+... ...-++++=++++++. +||.|+.
T Consensus 32 TMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 32 TMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp ECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred CCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 6665 99999999999999 99999998776641 11222 3445677777888875 8998875
No 83
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=95.18 E-value=0.046 Score=52.76 Aligned_cols=69 Identities=20% Similarity=0.327 Sum_probs=52.9
Q ss_pred CCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-C---CCCCCCHHHHHHhhhhccccceEEEc
Q 014671 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-S---YHPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 255 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~---~~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
+++|++++ +..-+|.||..++++|++.+|.++|.+..++.--. + ..-..+++++...++++ .||.|+..
T Consensus 21 g~~ig~VP-TMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~P 93 (283)
T 3uk2_A 21 QNRTAFVP-TMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFAP 93 (283)
T ss_dssp CSSCEEEE-ECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEECC
T ss_pred CCeEEEEC-CCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEeC
Confidence 45666554 77789999999999999999999999988775432 1 22577888888887776 48877664
No 84
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=95.15 E-value=0.15 Score=51.45 Aligned_cols=94 Identities=18% Similarity=0.199 Sum_probs=57.3
Q ss_pred eEEEEecccCcCCHHHHHH-HHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccc---ccEEEe-CCCccc
Q 014671 66 VRVYMDGCFDLMHYGHANA-LRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW---VDEVIA-NAPYAI 140 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~l-L~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~---VD~vi~-~~p~~~ 140 (420)
++|++..+++++|.||..+ .+.|.+.++.|++-+. +-..| +-=++.+-|++..+.+.- -+.++. ..|+.+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllhPl----vG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~m 262 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV----VGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 262 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEEEC----CCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecchhh
Confidence 4688899999999999555 5555665675443222 21122 334788999888776321 122332 223322
Q ss_pred -----cHHHHHHHH-hhcCccEEEEcCCCC
Q 014671 141 -----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 141 -----~~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
.+..+..++ +.++|.++++|.|..
T Consensus 263 ryAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 263 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 133455555 459999999999975
No 85
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=95.04 E-value=0.49 Score=49.37 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=59.1
Q ss_pred eEEEEecccCcCCHHHH-HHHHHHHHhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcccc---ccEEEe-CCCccc
Q 014671 66 VRVYMDGCFDLMHYGHA-NALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW---VDEVIA-NAPYAI 140 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~-~lL~qA~~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~~---VD~vi~-~~p~~~ 140 (420)
++|++..+++++|.||. .+.+.|.+.++.|++-+.-- ..| +-=++.+-|++..+.+.- -+.++. ..|+.+
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g----~~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m 263 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVG----LTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 263 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCS----BCS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCC----CCC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecchhh
Confidence 46888999999999995 55566666677655444321 122 334788999988876421 122222 233332
Q ss_pred c-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014671 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 141 ~-----~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
- +..+..++ +.++|.++++|.|..
T Consensus 264 ~yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 264 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred hccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 1 33455545 459999999999974
No 86
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=94.75 E-value=0.054 Score=51.58 Aligned_cols=67 Identities=15% Similarity=0.289 Sum_probs=46.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeEEEEEecchhhh-hcCC--CCCCcHHHHHHHHhccccccEEEe
Q 014671 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (420)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~lgd~LiVgV~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~vi~ 134 (420)
++-+.-+.-.+|-||+.|+++|++.+|.++|.+.-+|.=. .... ...-++++=+++++.. +||.++.
T Consensus 25 ~ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 25 KIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 3444455558999999999999999999998887766311 0000 2234566667777775 7887775
No 87
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.64 E-value=0.078 Score=51.11 Aligned_cols=67 Identities=24% Similarity=0.328 Sum_probs=44.2
Q ss_pred CCCeEEEE--cCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccC-CC---CCCCCHHHHHHhhhhccccceEEEc
Q 014671 254 PNARVVYI--DGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRG-SY---HPIMHLHERSLSVLACRYVDEVIIG 325 (420)
Q Consensus 254 ~~~~iV~~--~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~-~~---~pi~~~~ER~~~v~~~~~VD~Vvi~ 325 (420)
.+++|.++ -|. +|.||+.++++|++ +|.+||.|.-++.=.. +. +-.-++++=...+++. .||.|..+
T Consensus 23 ~g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~P 95 (285)
T 3mxt_A 23 HQLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVFIP 95 (285)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEECC
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEECC
Confidence 35677774 475 99999999999999 9999999998765322 11 1223344334444444 58866553
No 88
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=92.97 E-value=0.13 Score=51.26 Aligned_cols=89 Identities=15% Similarity=0.050 Sum_probs=58.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-ccc-c--eEEE-cCCCC---
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYV-D--EVII-GAPWE--- 329 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~V-D--~Vvi-~~~~~--- 329 (420)
.|+.-|+||++|.||..+.++|.+..|.|++--.--. .+.--.+.+-|+++++.+ +.. + .|++ ..|..
T Consensus 157 ~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g~----~K~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m~~ 232 (349)
T 1v47_A 157 KVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA----KKPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPMRY 232 (349)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC----CCTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCCCC
T ss_pred eEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCCC----CCCCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHhhc
Confidence 3555899999999999999999999997776444322 223568999999888765 322 3 2443 12221
Q ss_pred --chHH----HH-hhcCccEEEEcCCcC
Q 014671 330 --VTKD----MI-TTFNICLVVHGTVSE 350 (420)
Q Consensus 330 --~~~~----~i-~~~~~d~vv~G~d~~ 350 (420)
.+.. ++ +.+.+..++-|.|..
T Consensus 233 aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 233 AGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred CCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 1111 12 335788999998864
No 89
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=92.76 E-value=0.075 Score=50.60 Aligned_cols=42 Identities=21% Similarity=0.546 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCccccCCHHHHHHHHHHHhcCCEEEEEEecCcc
Q 014671 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295 (420)
Q Consensus 253 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~~gd~LiVgV~~D~~ 295 (420)
..+++|.+++ |-=-+|.||+.++++|++.+|.+||.|.-++.
T Consensus 21 ~~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~ 62 (264)
T 3n8h_A 21 IKQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVNPT 62 (264)
T ss_dssp CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCCGG
T ss_pred hCCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCcc
Confidence 3456777665 22268999999999999999999999998864
No 90
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=92.57 E-value=0.12 Score=52.19 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=57.1
Q ss_pred eEEEEcCccccCCHHHHHHHHHHHhcC--CEEEEEEecCccccCCCCCCCCHHHHHHhhhhc-ccc-c--eEEE---cCC
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC-RYV-D--EVII---GAP 327 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~Ak~~g--d~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~-~~V-D--~Vvi---~~~ 327 (420)
+.|+..|+||++|.||..+.++|.+.. |.|++--.... .+.--.+.+.|+++++.+ +.. + .|++ ..+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~~ 268 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFD 268 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CCCCCCCHHHHHHHHHHHHHhcCCCcceEEEechHH
Confidence 345669999999999999999999876 76654333222 223468889999888765 321 2 2322 222
Q ss_pred C---CchHH----HH-hhcCccEEEEcCCcC
Q 014671 328 W---EVTKD----MI-TTFNICLVVHGTVSE 350 (420)
Q Consensus 328 ~---~~~~~----~i-~~~~~d~vv~G~d~~ 350 (420)
. +.+.. ++ +.+++.+++-|.|..
T Consensus 269 m~~aGPreailhaiirkn~G~t~fIVGrDha 299 (396)
T 1jhd_A 269 MLYAGPREAVLHAYFRQNMGATHFIIGRDHA 299 (396)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhcCCchHHHHHHHHHHcCCCcEEEECCCCC
Confidence 1 11222 12 335788999999864
No 91
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=91.92 E-value=0.61 Score=49.22 Aligned_cols=94 Identities=18% Similarity=0.139 Sum_probs=58.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHh-CCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc---cccEEEe-CCCcc-
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKAL-GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYA- 139 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~l-gd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vi~-~~p~~- 139 (420)
++|++.=+++++|.||..++++|... ++.|+|-+..- ..| +-=++.+-|++-++.+. --+.++. ..|..
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~g----~~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVG----LTK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCC----CCC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCCC----CCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 35788899999999999999988865 77655432211 112 23467888988877631 1122332 12222
Q ss_pred -cc---HHHHHHHH-hhcCccEEEEcCCCC
Q 014671 140 -IT---EQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 140 -~~---~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
+. +..+..++ +.++|..+++|.|..
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 11 22334433 568999999998863
No 92
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=91.36 E-value=0.8 Score=48.01 Aligned_cols=94 Identities=19% Similarity=0.209 Sum_probs=59.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHH-hCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhcc----ccccEEEe-CCCcc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL----KWVDEVIA-NAPYA 139 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~-lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~----~~VD~vi~-~~p~~ 139 (420)
++|++.=++.++|.||..++++|.. .++.|+|-+.-- ..| +-=++.+-|++-++.+ ---+.++. ..|..
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g----~~k-~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~ 238 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVG----LTK-PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLA 238 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCS----BCC-TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCB
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcC----CCC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCch
Confidence 4688899999999999999999986 688666533221 122 3356889999888764 11122222 22221
Q ss_pred c--c---HHHHHHHH-hhcCccEEEEcCCCC
Q 014671 140 I--T---EQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 140 ~--~---~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
. . +.-+..++ +.++|..+++|.|..
T Consensus 239 m~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 239 MRMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 1 23344444 569999999998764
No 93
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=89.11 E-value=4.7 Score=43.01 Aligned_cols=95 Identities=16% Similarity=0.084 Sum_probs=59.4
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHH-hCC------eEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc-----cccEE
Q 014671 65 RVRVYMDGCFDLMHYGHANALRQAKA-LGD------ELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-----WVDEV 132 (420)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~-lgd------~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~-----~VD~v 132 (420)
-++|++.=+-+++|.||..|++.|.+ .+| .|.+-+. +-..| +-=++.+-|++-.+.+- --+.+
T Consensus 412 w~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl----~G~tk-~~di~~~~r~~~~~~~~~~~y~p~~~~ 486 (630)
T 1x6v_B 412 ADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPL----GGWTK-DDDVPLMWRMKQHAAVLEEGVLNPETT 486 (630)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEB----CSCCC-TTSCCHHHHHHHHHHHHHTTSSCGGGE
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeC----cCCCC-CCCCCHHHHHHHHHHHHHcCCCCCcce
Confidence 34788888999999999999999986 444 2333222 11112 34668888888776531 11334
Q ss_pred Ee-CCCcccc-----HHHHHHHH-hhcCccEEEEcCCCC
Q 014671 133 IA-NAPYAIT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 133 i~-~~p~~~~-----~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
+. ..|+.+- +.-+..++ +.++|.++++|.|..
T Consensus 487 ~l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 487 VVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp EECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred EEeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 43 2232211 34455555 459999999999975
No 94
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=86.93 E-value=4.6 Score=42.33 Aligned_cols=94 Identities=7% Similarity=0.019 Sum_probs=55.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHH-HhCCeEEEEEecchhhhhcCCCCCCcHHHHHHHHhccc---cccEEEe-CCCccc
Q 014671 66 VRVYMDGCFDLMHYGHANALRQAK-ALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (420)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~-~lgd~LiVgV~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vi~-~~p~~~ 140 (420)
++|++.=+-+++|.||..++++|. +.+|.|++ |+ .+-..| +-=++.+-|++-.+.+. --+.++. ..|+..
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll--~p--l~g~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~m 238 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENEANLLL--HP--QVGGDI-TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAPP 238 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCT-TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSCC
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhcCCeEEE--Ee--ccCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEeecchhh
Confidence 357888999999999999999988 66775443 22 121112 34667888888776531 1222331 233322
Q ss_pred -----cHHHHHHHH-hhcCccEEEEcCCCC
Q 014671 141 -----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (420)
Q Consensus 141 -----~~~fl~~ll-~~~~~d~vV~G~D~~ 164 (420)
.+.-+..++ +.++|..+++|.|..
T Consensus 239 ~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 239 PEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp CCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred cccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 134455555 459999999999864
No 95
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=55.75 E-value=89 Score=32.21 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=53.2
Q ss_pred EEEEcCccccCCHHHHHHHHHH-HhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhcc--c-cceEEE-cCCCCc--
Q 014671 258 VVYIDGAFDLFHAGHVEILKKA-RQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLACR--Y-VDEVII-GAPWEV-- 330 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~A-k~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~~--~-VD~Vvi-~~~~~~-- 330 (420)
.|+.-.+++++|.||.+++.++ .+.+|-|+|--.--. .+.--++.+-|+...+++- | -+.|++ .-|...
T Consensus 190 ~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g~----~k~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m~y 265 (511)
T 1g8f_A 190 RVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL----TKPGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMRM 265 (511)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB----CSTTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBCCC
T ss_pred cEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCCC----CCCCCCCHHHHHHHHHHHHHhCCcccEEEEecchhhhc
Confidence 3556789999999997777654 455775443322111 1223478899998777762 3 234444 122211
Q ss_pred --h-----HHHH-hhcCccEEEEcCCcCC
Q 014671 331 --T-----KDMI-TTFNICLVVHGTVSET 351 (420)
Q Consensus 331 --~-----~~~i-~~~~~d~vv~G~d~~~ 351 (420)
+ ...+ +.+.+..++-|.|...
T Consensus 266 aGprea~~hai~r~n~G~th~IvGrdhAg 294 (511)
T 1g8f_A 266 SGDREAVWHAIIRKNYGASHFIVGRDHAG 294 (511)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEECCTTTTC
T ss_pred cCcHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 1 1223 3478999999987644
No 96
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=39.65 E-value=36 Score=35.37 Aligned_cols=88 Identities=16% Similarity=0.145 Sum_probs=53.7
Q ss_pred EEEEcCccccCCHHHHHHHHHHHh-cCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc--cc--cceEEEcC-C----
Q 014671 258 VVYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC--RY--VDEVIIGA-P---- 327 (420)
Q Consensus 258 iV~~~G~FDl~H~GHi~~L~~Ak~-~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~--~~--VD~Vvi~~-~---- 327 (420)
.|+--=++.|+|.||..++++|.. .+|.|+|-...-. .+..-++.+-|+..++++ .| -+.|++.. |
T Consensus 165 ~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g~----~k~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~m~ 240 (546)
T 2gks_A 165 KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVGL----TKPGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAMR 240 (546)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCSB----CCTTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCBCC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcCC----CCCCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCchhh
Confidence 355577899999999999998886 7887666322221 122357889999888776 22 13444421 1
Q ss_pred CCc-----hHHHH-hhcCccEEEEcCCc
Q 014671 328 WEV-----TKDMI-TTFNICLVVHGTVS 349 (420)
Q Consensus 328 ~~~-----~~~~i-~~~~~d~vv~G~d~ 349 (420)
+.- ....+ +.+.+..++-|.|.
T Consensus 241 ~agprea~~ha~ir~n~G~th~ivgrdh 268 (546)
T 2gks_A 241 MAGPREALWHGIIRRNYGATHFIVGRDH 268 (546)
T ss_dssp CCTHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred ccCchHHHHHHHHHHhCCCCeEEECCCC
Confidence 111 11223 44677777778654
No 97
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=28.10 E-value=38 Score=35.39 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=52.6
Q ss_pred EEEcCccccCCHHHHHHHHHHH-hcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc--ccc-ceEEEc-CCCC----
Q 014671 259 VYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-APWE---- 329 (420)
Q Consensus 259 V~~~G~FDl~H~GHi~~L~~Ak-~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~--~~V-D~Vvi~-~~~~---- 329 (420)
|+.-=+++++|.||..++++|. +.+|.|+|-...-. .+.--++.+-|+...+++ .|- +.|++. .|..
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~g~----~k~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m~~a 268 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVGL----TKPGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMRMG 268 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCCC----CCTTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCCCCC
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCCCC----CCCCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchhhcc
Confidence 5557789999999999988877 45886665321111 122346888899887776 232 344443 2211
Q ss_pred chH-----H-HHhhcCccEEEEcCCc
Q 014671 330 VTK-----D-MITTFNICLVVHGTVS 349 (420)
Q Consensus 330 ~~~-----~-~i~~~~~d~vv~G~d~ 349 (420)
-+. . +-+.+.+..++-|.|.
T Consensus 269 gprea~~ha~ir~n~G~th~ivgrdh 294 (573)
T 1m8p_A 269 GPREAIWHAIIRKNHGATHFIVGRDH 294 (573)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECTTT
T ss_pred CchHHHHHHHHHHHCCCCeEEECCCC
Confidence 111 2 3345677777778664
No 98
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=27.10 E-value=53 Score=32.88 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=52.8
Q ss_pred eEEEEcCccccCCHHHHHHHHHH-HhcCCEEEEEEecCccccCCCCCCCCHHHHHHhhhhc--ccc-ceEEEc-CCCCc-
Q 014671 257 RVVYIDGAFDLFHAGHVEILKKA-RQLGDFLLVGIYTDQIVRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-APWEV- 330 (420)
Q Consensus 257 ~iV~~~G~FDl~H~GHi~~L~~A-k~~gd~LiVgV~~D~~v~~~~~pi~~~~ER~~~v~~~--~~V-D~Vvi~-~~~~~- 330 (420)
+.|+.-.+++++|.||.+++.+| .+.+|-|+|- ..+-..+.--++.+-|+...+++ .|. +.|++. -|...
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lllh----PlvG~tK~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~mr 263 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIH----PVVGLTKPGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMR 263 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEEC----CBCSBCCTTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBCC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEEE----ECCCCCCCCCCCHHHHHHHHHHHHHhCCCccEEEEecchhhh
Confidence 34666889999999997666655 5657644432 11111122347889999777776 232 334432 11111
Q ss_pred ---h-----HHHH-hhcCccEEEEcCCcCC
Q 014671 331 ---T-----KDMI-TTFNICLVVHGTVSET 351 (420)
Q Consensus 331 ---~-----~~~i-~~~~~d~vv~G~d~~~ 351 (420)
+ ...+ +.+.+..++-|.|...
T Consensus 264 yAGPrEai~HAiiRkN~GcthfIVGRDhAG 293 (395)
T 1r6x_A 264 MSGDREAVWHAIIRKNYGASHFIVGRDHAG 293 (395)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEECTTTTC
T ss_pred hcCcHHHHHHHHHHHHcCCceEEECCCCCC
Confidence 1 1123 3478999999988644
Done!