Query 014679
Match_columns 420
No_of_seqs 181 out of 1160
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:54:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.1E-74 3.7E-79 579.6 34.2 392 27-418 4-413 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-66 4.1E-71 521.3 36.5 374 28-420 5-403 (403)
3 1t6e_X Xylanase inhibitor; two 100.0 2.8E-61 9.7E-66 478.9 31.3 349 31-414 2-381 (381)
4 2x0b_A Renin; hydrolase-hormon 100.0 3.9E-55 1.3E-59 433.6 22.1 308 31-404 50-382 (383)
5 1mpp_A Pepsin; hydrolase(acid 100.0 3.8E-54 1.3E-58 424.9 28.3 322 28-410 4-360 (361)
6 1j71_A Candidapepsin, aspartic 100.0 2.1E-54 7E-59 422.3 25.6 306 31-407 2-326 (334)
7 1tzs_A Cathepsin E; hydrolase, 100.0 3.7E-54 1.3E-58 423.2 27.5 310 31-407 12-344 (351)
8 2apr_A Rhizopuspepsin; hydrola 100.0 8.2E-54 2.8E-58 416.5 29.0 299 35-404 7-323 (325)
9 3psg_A Pepsinogen; hydrolase(a 100.0 2E-54 6.9E-59 427.5 24.3 307 30-404 44-369 (370)
10 1am5_A Pepsin, acid proteinase 100.0 5E-54 1.7E-58 417.9 26.3 303 32-404 2-323 (324)
11 3cms_A Chymosin B; hydrolase, 100.0 2.6E-54 8.9E-59 419.7 23.8 304 31-404 3-322 (323)
12 1dpj_A Proteinase A; proteinas 100.0 1.7E-53 5.7E-58 415.1 27.8 304 32-404 3-328 (329)
13 2qzx_A Candidapepsin-5; aspart 100.0 6.4E-54 2.2E-58 420.2 24.5 308 31-407 2-333 (342)
14 3c9x_A Trichoderma reesei aspa 100.0 1.5E-53 5.2E-58 415.3 25.6 307 34-403 5-328 (329)
15 4aa9_A Chymosin; hydrolase, as 100.0 4.6E-54 1.6E-58 417.5 21.2 301 34-404 3-319 (320)
16 3k1w_A Renin; protease, altern 100.0 1.5E-53 5.3E-58 417.4 23.4 311 29-405 5-340 (341)
17 1htr_B Gastricsin; aspartyl pr 100.0 1.1E-53 3.7E-58 416.4 21.3 303 34-404 5-328 (329)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-52 4.5E-57 410.4 27.3 302 31-407 2-331 (339)
19 1oew_A Endothiapepsin; hydrola 100.0 4.1E-53 1.4E-57 412.2 23.6 307 34-403 5-328 (329)
20 3pvk_A Candidapepsin-2; hydrol 100.0 7.7E-53 2.6E-57 412.6 24.4 309 31-407 2-333 (342)
21 1miq_A Plasmepsin; aspartic pr 100.0 4E-53 1.4E-57 419.0 18.8 303 31-406 51-375 (375)
22 1ibq_A Aspergillopepsin; aspar 100.0 1.2E-51 4.2E-56 401.2 26.2 302 34-404 5-324 (325)
23 1wkr_A Polyporopepsin; hydrola 100.0 2.2E-51 7.7E-56 401.9 26.6 302 32-407 3-335 (340)
24 2ewy_A Beta-secretase 2; BACE2 100.0 5.3E-51 1.8E-55 405.6 28.3 320 35-406 6-356 (383)
25 1qdm_A Prophytepsin; aspartic 100.0 2.1E-51 7.2E-56 417.6 25.6 324 31-404 41-477 (478)
26 2bju_A Plasmepsin II; aspartic 100.0 6.6E-52 2.3E-56 417.3 21.5 305 31-407 127-452 (453)
27 1yg9_A Aspartic protease BLA G 100.0 4.9E-52 1.7E-56 404.7 19.1 303 31-405 6-329 (330)
28 1izd_A Aspartic proteinase; su 100.0 4.2E-51 1.4E-55 397.0 24.9 294 41-404 13-322 (323)
29 2qp8_A Beta-secretase 1; BACE1 100.0 6.9E-51 2.4E-55 406.3 26.4 315 41-407 19-369 (395)
30 3qvc_A Histo-aspartic protease 100.0 1.2E-51 4E-56 416.0 20.0 304 30-406 125-450 (451)
31 1bxo_A Protein (penicillopepsi 100.0 3.7E-51 1.3E-55 397.5 22.1 293 41-404 13-322 (323)
32 3vf3_A Beta-secretase 1; struc 100.0 8.8E-50 3E-54 399.2 29.3 317 42-407 27-376 (402)
33 3lpj_A Beta-secretase 1; alzhe 100.0 1.1E-49 3.7E-54 404.5 27.2 317 42-407 73-422 (455)
34 1b5f_A Protein (cardosin A); h 100.0 2.7E-39 9.2E-44 300.5 18.0 220 33-300 4-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 3.6E-37 1.2E-41 286.7 19.4 221 141-404 3-240 (241)
36 1lya_A Cathepsin D; lysosomal 99.7 2.8E-18 9.6E-23 135.5 8.4 88 32-131 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.6 2.7E-16 9.4E-21 121.8 6.9 71 332-404 12-86 (87)
38 2i1a_A DNA damage-inducible pr 93.9 0.28 9.5E-06 40.6 8.9 25 378-402 110-134 (148)
39 2i1a_A DNA damage-inducible pr 93.1 0.12 4.2E-06 42.8 5.4 30 41-72 23-52 (148)
40 3s8i_A Protein DDI1 homolog 1; 91.5 0.62 2.1E-05 38.7 7.7 27 377-403 108-134 (148)
41 1fmb_A EIAV protease; hydrolas 82.5 1.1 3.8E-05 34.7 3.7 27 44-72 8-34 (104)
42 2hs1_A HIV-1 protease; ultra-h 82.1 1.2 4.1E-05 34.2 3.7 26 45-72 9-34 (99)
43 3ec0_A Protease; HIV-2, inhibi 77.5 2 6.8E-05 32.9 3.5 26 45-72 9-34 (99)
44 3liy_A Protease; hydrolase, hy 75.7 2.2 7.6E-05 33.4 3.4 29 45-73 11-42 (116)
45 3s8i_A Protein DDI1 homolog 1; 71.7 2.9 9.9E-05 34.5 3.5 30 41-72 21-50 (148)
46 2hah_A Protease, retropepsin; 71.1 3.3 0.00011 32.7 3.4 26 44-72 14-39 (116)
47 3sqf_A Protease; folded monome 67.8 4.5 0.00015 31.7 3.5 27 44-72 9-35 (114)
48 3slz_A GAG-Pro-POL polyprotein 56.8 9 0.00031 30.9 3.6 30 42-73 20-49 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 51.5 11 0.00038 32.7 3.5 26 45-72 9-34 (203)
50 2rsp_A RSV protease; hydrolase 48.4 12 0.00042 29.7 3.0 21 51-73 27-47 (124)
51 3c9x_A Trichoderma reesei aspa 46.4 27 0.00092 32.4 5.7 44 28-73 180-229 (329)
52 1lya_A Cathepsin D; lysosomal 45.1 23 0.00078 26.6 4.0 16 275-290 29-44 (97)
53 1b5f_A Protein (cardosin A); h 42.7 28 0.00095 30.7 4.9 40 31-73 179-226 (239)
54 1ibq_A Aspergillopepsin; aspar 41.1 32 0.0011 31.8 5.3 44 28-73 175-224 (325)
55 2apr_A Rhizopuspepsin; hydrola 40.2 28 0.00097 32.2 4.8 45 28-74 180-229 (325)
56 1lya_B Cathepsin D; lysosomal 39.4 33 0.0011 30.0 4.9 39 32-73 91-136 (241)
57 1oew_A Endothiapepsin; hydrola 38.5 32 0.0011 31.9 4.9 44 28-73 179-228 (329)
58 1bxo_A Protein (penicillopepsi 37.3 31 0.0011 31.9 4.6 44 28-73 176-223 (323)
59 1izd_A Aspartic proteinase; su 34.8 31 0.0011 31.9 4.1 41 31-73 179-224 (323)
60 1t6e_X Xylanase inhibitor; two 33.7 21 0.00074 33.9 2.8 45 29-73 190-245 (381)
61 3pvk_A Candidapepsin-2; hydrol 31.4 66 0.0023 29.7 5.8 43 28-73 180-228 (342)
62 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.8 37 0.0013 29.4 3.5 26 45-72 113-138 (203)
63 3aup_A SBG7S, BG, basic 7S glo 29.9 53 0.0018 31.4 4.9 43 30-73 216-275 (403)
64 1mpp_A Pepsin; hydrolase(acid 28.9 63 0.0021 30.2 5.2 44 218-290 4-49 (361)
65 1tzs_A Cathepsin E; hydrolase, 28.0 58 0.002 30.4 4.8 42 29-73 190-238 (351)
66 3cms_A Chymosin B; hydrolase, 27.7 72 0.0024 29.3 5.3 16 275-290 30-45 (323)
67 3fv3_A SAPP1P-secreted asparti 27.4 88 0.003 28.8 5.9 43 28-73 183-230 (339)
68 1am5_A Pepsin, acid proteinase 26.9 82 0.0028 28.9 5.5 42 29-74 177-225 (324)
69 1qdm_A Prophytepsin; aspartic 25.9 67 0.0023 31.7 4.9 40 31-73 222-269 (478)
70 2x0b_A Renin; hydrolase-hormon 25.5 64 0.0022 30.7 4.6 40 31-73 233-279 (383)
71 1htr_B Gastricsin; aspartyl pr 25.3 69 0.0023 29.5 4.7 41 31-74 180-228 (329)
72 2qzx_A Candidapepsin-5; aspart 25.2 78 0.0027 29.3 5.1 43 28-73 181-228 (342)
73 3psg_A Pepsinogen; hydrolase(a 24.9 75 0.0026 29.9 4.9 43 28-73 220-269 (370)
74 1fmb_A EIAV protease; hydrolas 24.1 63 0.0022 24.6 3.4 34 244-292 5-38 (104)
75 2hs1_A HIV-1 protease; ultra-h 23.3 62 0.0021 24.5 3.1 31 244-289 5-35 (99)
76 2ewy_A Beta-secretase 2; BACE2 23.1 76 0.0026 29.9 4.6 42 29-73 184-236 (383)
77 3slz_A GAG-Pro-POL polyprotein 22.5 58 0.002 26.1 3.0 30 245-289 20-49 (132)
78 3vla_A EDGP; extracellular, in 22.5 69 0.0024 30.8 4.2 43 31-73 212-281 (413)
79 1dpj_A Proteinase A; proteinas 21.8 81 0.0028 29.0 4.4 40 31-73 183-228 (329)
80 3k1w_A Renin; protease, altern 21.1 57 0.002 30.1 3.2 39 32-73 191-236 (341)
81 4aa9_A Chymosin; hydrolase, as 20.7 84 0.0029 28.7 4.2 40 31-73 177-223 (320)
82 1j71_A Candidapepsin, aspartic 20.5 80 0.0027 29.1 4.1 40 31-73 184-228 (334)
83 2hah_A Protease, retropepsin; 20.5 80 0.0027 24.6 3.4 31 243-289 10-40 (116)
84 1wkr_A Polyporopepsin; hydrola 20.0 86 0.003 28.9 4.2 45 29-73 172-222 (340)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-74 Score=579.63 Aligned_cols=392 Identities=60% Similarity=0.997 Sum_probs=327.0
Q ss_pred CCCceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccC--------
Q 014679 27 FRPKALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAK-------- 98 (420)
Q Consensus 27 ~~~~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~-------- 98 (420)
.+++.+.+||++|..+++|+++|.||||||+|.|+|||||+++||+|..|++|+||+.+.|.+..|..+..+
T Consensus 4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~ 83 (413)
T 3vla_A 4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNG 83 (413)
T ss_dssp CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSC
T ss_pred CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccC
Confidence 478999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred ---CCCCCCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCCc
Q 014679 99 ---ACGGGICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKVA 175 (420)
Q Consensus 99 ---~c~~~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s 175 (420)
.|.++.|.|.+.|+.+++.+.|.+++|+|+|+..+|...+..++++++.|||++.+...+.....+||||||++++|
T Consensus 84 ~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS 163 (413)
T 3vla_A 84 PRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA 163 (413)
T ss_dssp CBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred CCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence 34456799999994478999999999999998754432223468889999999986434455678999999999999
Q ss_pred cHHHHhhhcCCCCceEEecCCC--CCceEEEcCCCCCCCCCccCCCC-ceeeeCcccCCCCC-CCcCCCCCcceEeEEeE
Q 014679 176 LPSQLAAAFSLKRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKN-LKYTPLFINKVNTA-SGFLGEPSVEYFIGVTS 251 (420)
Q Consensus 176 ~~~ql~~~~~i~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~-~~~~p~~~~~~~~~-~~~~~~~~~~y~v~l~~ 251 (420)
++.||..++.++++||+||.+. ..|+|+||+.|..+.|+.++.++ +.|+|++.++..++ +.++.....+|.|+|++
T Consensus 164 l~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~ 243 (413)
T 3vla_A 164 LPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKS 243 (413)
T ss_dssp HHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECCCE
T ss_pred hHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEEEE
Confidence 9999999988889999999984 68999999998765555567888 99999998643210 11222234799999999
Q ss_pred EEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCC--cccccCCCCCCCcceeecCCCcccc
Q 014679 252 VHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMP--KVARVAPVAPFGACFRLQDIGFTRI 329 (420)
Q Consensus 252 i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~C~~~~~~~~~~~ 329 (420)
|+||++.+.++.+.+++++.+.+++||||||++++||+++|++|+++|.+++. .+++.++...+..|+..++....+.
T Consensus 244 IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 323 (413)
T 3vla_A 244 IKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRL 323 (413)
T ss_dssp EEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCEETT
T ss_pred EEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCcccccc
Confidence 99999999988888877666678999999999999999999999999998763 3444444445789998864322122
Q ss_pred CCCcCeEEEEEeCCceEEEEccCceEEEeCCCeEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCccc
Q 014679 330 GPVVPQIDLVLQNKNVVWSIHGQNSMVQIGGDALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLFER 409 (420)
Q Consensus 330 ~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~~~ 409 (420)
+..+|+|+|+|+|++++|+|++++|+++..++..|++++.......+.||||++|||++|+|||++++|||||++++.+.
T Consensus 324 ~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~~~~ 403 (413)
T 3vla_A 324 GPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSR 403 (413)
T ss_dssp EECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGGGGT
T ss_pred ccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEecccCc
Confidence 34799999999974589999999999987667899988875432235799999999999999999999999999999999
Q ss_pred cCcc-ccccc
Q 014679 410 ATCT-FNFTS 418 (420)
Q Consensus 410 ~~c~-~~~~~ 418 (420)
++|+ |+||+
T Consensus 404 ~~c~~~~~~~ 413 (413)
T 3vla_A 404 TTCANFNFTS 413 (413)
T ss_dssp CCGGGSBCCC
T ss_pred ccccCcCCCC
Confidence 9999 99986
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-66 Score=521.31 Aligned_cols=374 Identities=43% Similarity=0.753 Sum_probs=295.6
Q ss_pred CC-ceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccC--------
Q 014679 28 RP-KALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAK-------- 98 (420)
Q Consensus 28 ~~-~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~-------- 98 (420)
+| +.+.+||+++..+.+|+++|.||||||++.|+|||||+++||+|..|++|++|+.+.|.+..|..+..+
T Consensus 5 ~~~~~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~ 84 (403)
T 3aup_A 5 KPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCPAA 84 (403)
T ss_dssp -CCCCEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTTBHHHHHTTCCCEEECSSS
T ss_pred CCCccEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCCCccccCccccCccccCCC
Confidence 56 789999998778899999999999999999999999999999999999999999999999999766544
Q ss_pred ---CCCCCCCcceeccCCCCceeeEEEEEEEEEeeecCCCC--CCCceecCcEEEeeccccccc-CCCCCcceEEecCCC
Q 014679 99 ---ACGGGICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRN--PGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRS 172 (420)
Q Consensus 99 ---~c~~~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~--~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~ 172 (420)
.|.++.|.|.+.|+.|++.+.|.+++|+|+|++.++.. ....++++++.|||++..... +.....+||||||++
T Consensus 85 ~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~ 164 (403)
T 3aup_A 85 SRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHA 164 (403)
T ss_dssp CBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSS
T ss_pred CCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCC
Confidence 34456899999996578999999999999999854321 122368889999999886433 445678999999999
Q ss_pred CCccHHHHhhhcCCCCceEEecCCC--CCceEEEcCCCCCCC---CCccCCCCceeeeCcccCCCCCCCcCCCCCcceEe
Q 014679 173 KVALPSQLAAAFSLKRKFALCLSPF--DDGAIVFGDGPYYDL---NNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFI 247 (420)
Q Consensus 173 ~~s~~~ql~~~~~i~~~Fs~~L~~~--~~G~l~fGg~d~~~~---p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v 247 (420)
.+|++.||++....+++||+||.+. ..|.|+||| |+..+ |+.+..+++.|+|++.++ ..+|.|
T Consensus 165 ~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-----------~~~y~v 232 (403)
T 3aup_A 165 PISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-----------QGEYNV 232 (403)
T ss_dssp TTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-----------TSCEEE
T ss_pred CcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC-----------CCcceE
Confidence 9999999976555579999999874 689999999 75211 111112489999998753 369999
Q ss_pred EEeEEEECCEEe-ecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCc
Q 014679 248 GVTSVHVNGKAV-PLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGF 326 (420)
Q Consensus 248 ~l~~i~vg~~~~-~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~ 326 (420)
.+++|+|+++.+ .++...++++..+.+++||||||++++||+++|++|+++|.+++..+++......+..|+.....
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~-- 310 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKI-- 310 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGC--
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCc--
Confidence 999999999998 77666665555566789999999999999999999999998877544443333334568765421
Q ss_pred cccCCCcCeEEEEEeCCc--eEEEEccCceEEEeCCCeEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEE-ee
Q 014679 327 TRIGPVVPQIDLVLQNKN--VVWSIHGQNSMVQIGGDALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGF-SD 403 (420)
Q Consensus 327 ~~~~~~~P~i~f~f~g~~--~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGf-a~ 403 (420)
..+|+|+|+|+| + ++|+||+++|+++..++..|+++........+.||||+.|||++|+|||++++|||| |+
T Consensus 311 ----~~~P~i~f~f~g-~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~ 385 (403)
T 3aup_A 311 ----NAYPSVDLVMDK-PNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTS 385 (403)
T ss_dssp ----CCCCCEEEEESS-TTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESS
T ss_pred ----CcCCcEEEEEcC-CCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecc
Confidence 369999999998 4 699999999999876567899888765422357999999999999999999999999 99
Q ss_pred cCCccccCcc-cccccCC
Q 014679 404 SLLFERATCT-FNFTSIA 420 (420)
Q Consensus 404 ~~~~~~~~c~-~~~~~~~ 420 (420)
++..++++|+ |+.++-|
T Consensus 386 ~~~~~~~~C~~~~~~~~~ 403 (403)
T 3aup_A 386 SLHSHGVKCADLFNFANA 403 (403)
T ss_dssp CGGGGTCCGGGSCCTTTC
T ss_pred cccccCCCcccccccccC
Confidence 9999999999 8887754
No 3
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.8e-61 Score=478.95 Aligned_cols=349 Identities=31% Similarity=0.576 Sum_probs=275.8
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc---CCCC------
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA---KACG------ 101 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~---~~c~------ 101 (420)
++.+||+++..+.+|+++|.|||| |+|||||+++||+|..| .+|+.+.|.+..|..+.. ..|.
T Consensus 2 ~~~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~ 73 (381)
T 1t6e_X 2 PVLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---QPPAEIPCSSPTCLLANAYPAPGCPAPSCGS 73 (381)
T ss_dssp CEEEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---CCCCCCBTTSHHHHHHHSSCCTTCCCCCC--
T ss_pred ceEEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---CCCCccCCCCchhccccCCCCCCCCCccCCc
Confidence 588999999899999999999998 99999999999999877 357889999999976432 2454
Q ss_pred ---CCCC-cceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCc----EEEeecccccccCCCCCcceEEecCCCC
Q 014679 102 ---GGIC-GAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPN----FIFLCGSEFVLQGLASGVVGIAGLGRSK 173 (420)
Q Consensus 102 ---~~~~-~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~----~~fg~~~~~~~~~~~~~~~GIlGLg~~~ 173 (420)
+..| .|.+.|+ +++.+.|.+++|+|+|++.++. +.+++ +.|||++.+...++....|||||||+++
T Consensus 74 ~~~~~~c~~f~i~Yg-dGs~~~G~l~~Dtv~ig~~~g~-----~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~ 147 (381)
T 1t6e_X 74 DKHDKPCTAYPYNPV-SGACAAGSLSHTRFVANTTDGS-----KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSG 147 (381)
T ss_dssp ----CBCEECCBCTT-TCCBCCEEEEEEEEEEEEESSS-----SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSST
T ss_pred CcCCCcccccccccc-CCceeeEEEEEEEEEeeccCCC-----ccccceeeeeEeecCcccccCCCCCCCceEEEeCCCc
Confidence 2357 5999998 8888899999999999975321 13333 3689998763334456789999999999
Q ss_pred CccHHHHhhhcCCCCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEE
Q 014679 174 VALPSQLAAAFSLKRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVH 253 (420)
Q Consensus 174 ~s~~~ql~~~~~i~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~ 253 (420)
+|++.||..++.++++||+||.+...|+|+|||++..+ .++.+++.|+|++.++. ..+|+|.+++|+
T Consensus 148 ~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~---~~~~g~l~~tPl~~~~~----------~~~y~v~l~~i~ 214 (381)
T 1t6e_X 148 LALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPW---PQFTQSMPYTPLVTKGG----------SPAHYISARSIV 214 (381)
T ss_dssp TSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSC---HHHHTTCCEEECBCCTT----------CCSCEECEEEEE
T ss_pred chhHHHHhhhcccCceEEEEeCCCCCeeEEeCCccccc---ccccCcceeeccccCCC----------CcceEEEEEEEE
Confidence 99999999988668999999988668999999986421 14678999999987541 246779999999
Q ss_pred ECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCC-------ccccc-CCCCCCCcceeecCCC
Q 014679 254 VNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMP-------KVARV-APVAPFGACFRLQDIG 325 (420)
Q Consensus 254 vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~-------~~~~~-~~~~~~~~C~~~~~~~ 325 (420)
|+++.+.++...+. .+++||||||++++||+++|++|++++.+++. .+++. .+...+..|+..+...
T Consensus 215 vg~~~~~~~~~~~~-----~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~ 289 (381)
T 1t6e_X 215 VGDTRVPVPEGALA-----TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLG 289 (381)
T ss_dssp ETTEECCCCTTCSC-----TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCC
T ss_pred EcCEEecCCHHHcc-----CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCc
Confidence 99998876654432 36899999999999999999999999987652 23332 2234567899876422
Q ss_pred ccccCCCcCeEEEEEeCCceEEEEccCceEEEeCCCeEEEEEEeCCC-----CCCCceeechhhccccEEEEeCCCCeEE
Q 014679 326 FTRIGPVVPQIDLVLQNKNVVWSIHGQNSMVQIGGDALCLGFVDGGV-----NPRTSIVIGARQLENNLLQFDLATSRLG 400 (420)
Q Consensus 326 ~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ILG~~flr~~y~vfD~e~~rIG 400 (420)
.......+|+|+|+|+| +++|+||+++|+++..++..|++++.... ...+.||||+.|||++|+|||++++|||
T Consensus 290 ~~~~~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riG 368 (381)
T 1t6e_X 290 NNLGGYAVPNVQLGLDG-GSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLG 368 (381)
T ss_dssp EETTEECCCCEEEEETT-SCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEE
T ss_pred ccccCCcCCeEEEEECC-CcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEE
Confidence 11111369999999986 59999999999998766789998887543 1135799999999999999999999999
Q ss_pred EeecCCccccCcc-c
Q 014679 401 FSDSLLFERATCT-F 414 (420)
Q Consensus 401 fa~~~~~~~~~c~-~ 414 (420)
||++++ .++|+ |
T Consensus 369 fA~~~~--~~~cs~~ 381 (381)
T 1t6e_X 369 FSRLPH--FTGCGGL 381 (381)
T ss_dssp EEECCT--TCCSCC-
T ss_pred EecccC--CCCCCCC
Confidence 999887 78898 5
No 4
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.9e-55 Score=433.64 Aligned_cols=308 Identities=18% Similarity=0.219 Sum_probs=244.6
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~ 104 (420)
...+||++ ..+.+|+++|.||||||+|.|+|||||+++||+|..|.. .+..|..+. +.++....
T Consensus 50 ~~~~~l~n-~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~---------~~~~C~~~~~y~~~~SsT~~~~~ 119 (383)
T 2x0b_A 50 TSSVILTN-YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSR---------LYTACVYHKLFDASDSSSYKHNG 119 (383)
T ss_dssp -CEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCT---------TSHHHHTSCCBCGGGCTTCEEEE
T ss_pred cceEeeee-cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCC---------CcccccCCCCCCCCCCCcEEECC
Confidence 45688886 468899999999999999999999999999999987731 012343322 23344567
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCCc------cH
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA------LP 177 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------~~ 177 (420)
|.|.+.|+ +| ++.|.+++|+|+|++. +++ +.|||++...+. ......|||||||++.++ +.
T Consensus 120 ~~~~i~Yg-~G-s~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~ 187 (383)
T 2x0b_A 120 TELTLRYS-TG-TVSGFLSQDIITVGGI---------TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIF 187 (383)
T ss_dssp EEEEEECS-SC-EEEEEEEEEEEEETTE---------EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHH
T ss_pred cEEEEEcC-Cc-cEEEEEEeeEEEEcCc---------eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcHH
Confidence 89999997 55 5899999999999875 778 999999876322 123568999999998764 56
Q ss_pred HHHhhhcCC-CCceEEecCCC--C----CceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEe
Q 014679 178 SQLAAAFSL-KRKFALCLSPF--D----DGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVT 250 (420)
Q Consensus 178 ~ql~~~~~i-~~~Fs~~L~~~--~----~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~ 250 (420)
.+|.+++.| +++||+||.+. . +|+|+|||+|+ .+|.|++.|+|+.. ..+|.|.++
T Consensus 188 ~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~-----~~y~G~l~~~pv~~-------------~~~w~v~l~ 249 (383)
T 2x0b_A 188 DNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP-----QHYEGNFHYINLIK-------------TGVWQIQMK 249 (383)
T ss_dssp HHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCG-----GGEEEEEEEEEBSS-------------TTSCEEEEC
T ss_pred HHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcCh-----HHcCCceEEEEcCC-------------CceEEEEEe
Confidence 789999988 79999999886 2 89999999996 46778999999974 469999999
Q ss_pred EEEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccC
Q 014679 251 SVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIG 330 (420)
Q Consensus 251 ~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 330 (420)
+|.|+++.+.. .+.+.+|+||||+++++|++++++|.+++.+.. . ......+|+..
T Consensus 250 ~i~v~~~~~~~---------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~-~g~~~v~C~~~--------- 305 (383)
T 2x0b_A 250 GVSVGSSTLLC---------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----R-LFDYVVKCNEG--------- 305 (383)
T ss_dssp EEEESSCCCBS---------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----C-SSCEEEEGGGT---------
T ss_pred EEEeCCceEEc---------CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----c-CCcEEEecccc---------
Confidence 99999976432 124689999999999999999999999986431 1 11123468764
Q ss_pred CCcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 331 PVVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 331 ~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
..+|+|+|+|+| .+|+||+++|+++... +..|+ ++..... ...+.||||++|||++|+|||++++|||||++
T Consensus 306 ~~~P~i~f~~~g--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a 382 (383)
T 2x0b_A 306 PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 382 (383)
T ss_dssp TTCCCEEEEETT--EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccCceEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEc
Confidence 368999999987 9999999999987653 45898 6765432 12468999999999999999999999999974
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.8e-54 Score=424.85 Aligned_cols=322 Identities=14% Similarity=0.131 Sum_probs=251.7
Q ss_pred CCceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCC
Q 014679 28 RPKALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACG 101 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~ 101 (420)
..+...+|+.+ ..+.+|+++|.||||+|++.|+|||||+++||+|..|.. +..|..++ +.++.
T Consensus 4 ~g~~~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~----------~~~C~~~~~y~~~~SsT~~ 72 (361)
T 1mpp_A 4 DGSVDTPGLYD-FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDN----------SEGCVGKRFFDPSSSSTFK 72 (361)
T ss_dssp -CCEEEEEEEE-TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCG----------GGTCCSSCCBCGGGCTTCE
T ss_pred CCccceEEeec-CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCC----------CccCCCCCcCCCccCCceE
Confidence 45677889986 467899999999999999999999999999999986631 22343222 22333
Q ss_pred CCCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccc-----c-CCCCCcceEEecCCCCCc
Q 014679 102 GGICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVL-----Q-GLASGVVGIAGLGRSKVA 175 (420)
Q Consensus 102 ~~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~-----~-~~~~~~~GIlGLg~~~~s 175 (420)
...|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++.... . ......+||||||++.++
T Consensus 73 ~~~~~~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s 141 (361)
T 1mpp_A 73 ETDYNLNITYG-TGG-ANGIYFRDSITVGGA---------TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNT 141 (361)
T ss_dssp EEEEEEEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGS
T ss_pred ecCCeEEEEEC-Cce-EEEEEEEEEEEECCE---------EEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccc
Confidence 45689999997 665 899999999999875 788999999987633 1 113468999999997544
Q ss_pred ------------cHHHHhhhcCC-CCceEEecCCC-CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCC
Q 014679 176 ------------LPSQLAAAFSL-KRKFALCLSPF-DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEP 241 (420)
Q Consensus 176 ------------~~~ql~~~~~i-~~~Fs~~L~~~-~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~ 241 (420)
++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+..... .
T Consensus 142 ~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~~~---------~ 207 (361)
T 1mpp_A 142 AMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNN-----TLLGGDIQYTDVLKSRG---------G 207 (361)
T ss_dssp HHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCG-----GGBSSCCEEEECEEETT---------E
T ss_pred cccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCCh-----hhcCCceEEEEcccCCC---------c
Confidence 56689999888 69999999985 589999999986 56789999999987531 1
Q ss_pred CcceEeEEeEEEECCEEeecCccccccccCCCCcEE-EecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCccee
Q 014679 242 SVEYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTK-ISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFR 320 (420)
Q Consensus 242 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~i-vDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~ 320 (420)
..+|.|.+++|.|+++.+.... ...+| |||||++++||++++++|.+++.+.. +...+ ....+|+.
T Consensus 208 ~~~~~v~l~~i~v~~~~~~~~~---------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g-~~~~~C~~ 274 (361)
T 1mpp_A 208 YFFWDAPVTGVKIDGSDAVSFD---------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQ-GYTVPCSK 274 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEE---------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETT-EEEEEHHH
T ss_pred eeEEEEEEeEEEECCeeeccCC---------CCEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCC-cEEEECCC
Confidence 2389999999999998764221 35799 99999999999999999999986543 11111 12357886
Q ss_pred ecCCCccccCCCc-CeEEEEE--eC---CceEEEEccCceEEEeC-CCeEEE-EEEeCCCCCCCceeechhhccccEEEE
Q 014679 321 LQDIGFTRIGPVV-PQIDLVL--QN---KNVVWSIHGQNSMVQIG-GDALCL-GFVDGGVNPRTSIVIGARQLENNLLQF 392 (420)
Q Consensus 321 ~~~~~~~~~~~~~-P~i~f~f--~g---~~~~~~i~~~~y~~~~~-~~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vf 392 (420)
. ..+ |+|+|+| ++ ++++++||+++|+++.. ++..|+ ++.... .+.||||++|||++|+||
T Consensus 275 ~---------~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~---~~~~iLG~~fl~~~yvvf 342 (361)
T 1mpp_A 275 Y---------QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG---GNQFIVGNLFLRFFVNVY 342 (361)
T ss_dssp H---------TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES---SSCCEEEHHHHTTEEEEE
T ss_pred c---------ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC---CCCEEEChHHhccEEEEE
Confidence 4 256 9999999 51 13999999999999875 346897 676642 257999999999999999
Q ss_pred eCCCCeEEEeecCCcccc
Q 014679 393 DLATSRLGFSDSLLFERA 410 (420)
Q Consensus 393 D~e~~rIGfa~~~~~~~~ 410 (420)
|++++|||||++.+..+.
T Consensus 343 D~~~~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 343 DFGKNRIGFAPLASGYEN 360 (361)
T ss_dssp ETTTTEEEEEEBCTTTCC
T ss_pred ECCCCEEEEEEcccCCCC
Confidence 999999999976665443
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-54 Score=422.34 Aligned_cols=306 Identities=14% Similarity=0.194 Sum_probs=243.6
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCC--CCCCCCCccccCCCCcccCcccc------CCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCE--KGYVSSTNKTARCGSAQCNLANA------KACGG 102 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~--~c~~Sst~~~~~c~~~~C~~~~~------~~c~~ 102 (420)
.+.+||+++ +.+|+++|.||||||++.|+|||||+++||+|. .|..... .+.+..|..++. .++..
T Consensus 2 ~~~~~l~~~--~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~~SsT~~~ 75 (334)
T 1j71_A 2 DVPTTLINE--GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYS----GQTNNFCKQEGTFDPSSSSSAQN 75 (334)
T ss_dssp CEEEEEEEC--SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGSSCCBCGGGCTTCEE
T ss_pred ceeEEEecC--CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccc----ccccccccCCCcCCcccCCCccc
Confidence 578999984 789999999999999999999999999999865 4532100 112234543322 23334
Q ss_pred CCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCC--------
Q 014679 103 GICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKV-------- 174 (420)
Q Consensus 103 ~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~-------- 174 (420)
..|.|.+.|+ +++.+.|.+++|+|+|++. +++++.|||++.. ...+||||||++..
T Consensus 76 ~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~------~~~~GilGLg~~~~~~~~~~~~ 139 (334)
T 1j71_A 76 LNQDFSIEYG-DLTSSQGSFYKDTVGFGGI---------SIKNQQFADVTTT------SVDQGIMGIGFTADEAGYNLYD 139 (334)
T ss_dssp EEEEEEEEBT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------SSSSCEEECSCGGGSSTTCCCC
T ss_pred CCCceEEEEC-CCCEEEEEEEEEEEEECCE---------EEccEEEEEEEec------CCCccEEEEcCCcccCccccCC
Confidence 5789999998 8888999999999999875 7889999999875 24799999999764
Q ss_pred ccHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeE
Q 014679 175 ALPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTS 251 (420)
Q Consensus 175 s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~ 251 (420)
+++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~ 201 (334)
T 1j71_A 140 NVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDN-----AKYTGTLTALPVTS-------------SVELRVHLGS 201 (334)
T ss_dssp CHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET-----TSEEEEEEEEECCC-------------SSSCEEEEEE
T ss_pred cHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeech-----HHccCceEEEEccC-------------CCeEEEEEeE
Confidence 688999999988 68999999874 689999999986 46788999999975 3489999999
Q ss_pred EEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCC
Q 014679 252 VHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGP 331 (420)
Q Consensus 252 i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 331 (420)
|.|+++.+.. ...+||||||++++||++++++|.+++.+... .......+.+|+
T Consensus 202 i~v~g~~~~~-----------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~------------ 255 (334)
T 1j71_A 202 INFDGTSVST-----------NADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD------------ 255 (334)
T ss_dssp EEETTEEEEE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC------------
T ss_pred EEECCEeccC-----------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC------------
Confidence 9999988753 24699999999999999999999999875431 111111114675
Q ss_pred CcCeEEEEEeCCceEEEEccCceEEEeCCCeEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 332 VVPQIDLVLQNKNVVWSIHGQNSMVQIGGDALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 332 ~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
.+|.|+|+|.+ +.+++||+++|+++..++..|+..+... +.||||++|||++|+|||++++|||||+..+.
T Consensus 256 ~~p~i~f~f~~-g~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 256 LSGDAVFNFDQ-GVKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp CCSEEEEEEST-TCEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred CCCceEEEEcC-CcEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 26899999975 4999999999999875554698544322 25999999999999999999999999976554
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.7e-54 Score=423.25 Aligned_cols=310 Identities=17% Similarity=0.198 Sum_probs=243.7
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~ 104 (420)
.+.+||.+ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..+. +.++....
T Consensus 12 ~~~~~l~n-~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~ 79 (351)
T 1tzs_A 12 SAKEPLIN-YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-----------SPACKTHSRFQPSQSSTYSQPG 79 (351)
T ss_dssp --CCTTGG-GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------SGGGTTSCCBCGGGCTTCBCCS
T ss_pred ccceecee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-----------ccccCCCCcCCcccCcceEECC
Confidence 34577775 46789999999999999999999999999999998663 23343322 23444678
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccC-CCCCcceEEecCCCCCc------cH
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQG-LASGVVGIAGLGRSKVA------LP 177 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------~~ 177 (420)
|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++...... .....+||||||++..+ ++
T Consensus 80 ~~~~i~Yg-~Gs-~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 148 (351)
T 1tzs_A 80 QSFSIQYG-TGS-LSGIIGADQVSVEGL---------TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVF 148 (351)
T ss_dssp CEEEEESS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHH
T ss_pred CEEEEEeC-CCC-eEEEEEEeEEEECCe---------EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHH
Confidence 99999997 654 899999999999875 78899999998763221 23468999999998654 67
Q ss_pred HHHhhhcCC-CCceEEecCCC--C--CceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 178 SQLAAAFSL-KRKFALCLSPF--D--DGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 178 ~ql~~~~~i-~~~Fs~~L~~~--~--~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
.+|.+++.| +++||+||.+. . .|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|
T Consensus 149 ~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i 210 (351)
T 1tzs_A 149 DNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDH-----SHFSGSLNWVPVTK-------------QAYWQIALDNI 210 (351)
T ss_dssp HHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCG-----GGBCSCCEEEECSE-------------ETTEEEEEEEE
T ss_pred HHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCH-----HHcCCceEEEecCC-------------CceEEEEeCEE
Confidence 789999988 79999999886 2 89999999986 56789999999975 35899999999
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCC
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPV 332 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 332 (420)
+|+++.+... ....+||||||++++||++++++|.+++.+... . .....+|+.. ..
T Consensus 211 ~v~~~~~~~~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~-----~-g~~~~~C~~~---------~~ 266 (351)
T 1tzs_A 211 QVGGTVMFCS---------EGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPV-----D-GEYAVECANL---------NV 266 (351)
T ss_dssp EETTEEEECT---------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----S-SSEEECGGGG---------GG
T ss_pred EECCceEEcC---------CCceEEeccCCcceeCCHHHHHHHHHHhCCccc-----C-CeEEEeCCCC---------cc
Confidence 9999875421 135799999999999999999999998854321 1 1123468764 25
Q ss_pred cCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 333 VPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 333 ~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
+|+|+|+|+| ++++||+++|+++... +..|+ ++..... ...+.||||++|||++|+|||++++|||||++.+.
T Consensus 267 ~P~i~f~f~g--~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 267 MPDVTFTING--VPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp SCCEEEEETT--EEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred CCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 8999999976 9999999999987642 35798 5765431 12457999999999999999999999999976654
No 8
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=8.2e-54 Score=416.50 Aligned_cols=299 Identities=13% Similarity=0.130 Sum_probs=237.4
Q ss_pred EEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCCcce
Q 014679 35 RVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGICGAG 108 (420)
Q Consensus 35 p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~~~~ 108 (420)
++..+..+.+|+++|.||||+|++.|+|||||+++||+|..|.. | |.... +.++....|.|.
T Consensus 7 ~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~--------c----~~~~~~y~~~~SsT~~~~~~~~~ 74 (325)
T 2apr_A 7 PMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN--------C----GSGQTKYDPNQSSTYQADGRTWS 74 (325)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSS--------C----CTTSCCBCGGGCTTCEEEEEEEE
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCch--------H----hcCCCCCCcccCCCeeeCCCEEE
Confidence 33445578999999999999999999999999999999987731 2 22111 223334568999
Q ss_pred eccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCCc-------cHHHHh
Q 014679 109 PDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKVA-------LPSQLA 181 (420)
Q Consensus 109 ~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s-------~~~ql~ 181 (420)
+.|+ +++.+.|.+++|+|+|++. +++++.|||++...........+||||||++..+ ++.+|.
T Consensus 75 i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~ 144 (325)
T 2apr_A 75 ISYG-DGSSASGILAKDNVNLGGL---------LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLI 144 (325)
T ss_dssp EECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHH
T ss_pred EEEC-CCCCEEEEEEEEEEEECCE---------EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHH
Confidence 9998 8888999999999999875 7889999999875322222348999999987653 678999
Q ss_pred hhcCC-CCceEEecCCC---CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCE
Q 014679 182 AAFSL-KRKFALCLSPF---DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGK 257 (420)
Q Consensus 182 ~~~~i-~~~Fs~~L~~~---~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~ 257 (420)
+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|+++
T Consensus 145 ~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~~~v~l~~i~vg~~ 207 (325)
T 2apr_A 145 SQGLISRPIFGVYLGKAKNGGGGEYIFGGYDS-----TKFKGSLTTVPIDNS------------RGWWGITVDRATVGTS 207 (325)
T ss_dssp HTTSCSSSEEEEEECCGGGTCCEEEEETCCCG-----GGBCSCCEEEECBCT------------TSSCEEEECEEEETTE
T ss_pred hcCCCCCceEEEEecCCCCCCCCEEEEccCCc-----hhccCceEEEEccCC------------CCEEEEEEeEEEECCE
Confidence 99988 79999999653 689999999986 577899999999743 4689999999999993
Q ss_pred EeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEE
Q 014679 258 AVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQID 337 (420)
Q Consensus 258 ~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~ 337 (420)
+.. ....+||||||++++||+++|+++++++.+.+... .....+|+. ..+|+|+
T Consensus 208 -~~~----------~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~----------~~~p~i~ 261 (325)
T 2apr_A 208 -TVA----------SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT----------SAFKPLV 261 (325)
T ss_dssp -EEE----------CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG----------GGCCCEE
T ss_pred -ecC----------CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC----------CCCCcEE
Confidence 221 13579999999999999999999999997654311 111236763 1489999
Q ss_pred EEEeCCceEEEEccCceEEEeCCCeEEEEE-EeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 338 LVLQNKNVVWSIHGQNSMVQIGGDALCLGF-VDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 338 f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~-~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
|+|+| .+++||+++|+++.. +..|++. .... .+.||||++|||++|+|||++++|||||+.
T Consensus 262 f~f~g--~~~~ip~~~~~~~~~-~~~C~~~i~~~~---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (325)
T 2apr_A 262 FSING--ASFQVSPDSLVFEEF-QGQCIAGFGYGN---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPV 323 (325)
T ss_dssp EEETT--EEEEECGGGGEEEEE-TTEEEESEEEES---SSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred EEECC--EEEEECHHHEEEcCC-CCeEEEEEEcCC---CCCEEECHHHhcceEEEEECCCCEEEEEec
Confidence 99998 599999999998754 5689864 4332 257999999999999999999999999975
No 9
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2e-54 Score=427.47 Aligned_cols=307 Identities=16% Similarity=0.193 Sum_probs=242.0
Q ss_pred ceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc------CCCCCC
Q 014679 30 KALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA------KACGGG 103 (420)
Q Consensus 30 ~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~------~~c~~~ 103 (420)
.....||.+ ..+.+|+++|.||||||+|.|+|||||+++||+|..| .+..|..+.. .++...
T Consensus 44 ~~~~~~l~n-~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C-----------~~~~C~~~~~y~~~~SsT~~~~ 111 (370)
T 3psg_A 44 LIGDEPLEN-YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-----------SSLACSDHNQFNPDDSSTFEAT 111 (370)
T ss_dssp SSCCCTTGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTC-----------CSGGGTTSCCBCGGGCTTCEEE
T ss_pred ccceeccee-ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCC-----------CCcccCCCCCCCCccCcCcEEC
Confidence 345677775 4688999999999999999999999999999999765 3334544332 222345
Q ss_pred CCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCCc------c
Q 014679 104 ICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA------L 176 (420)
Q Consensus 104 ~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------~ 176 (420)
.|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++..... ......+||||||++.++ +
T Consensus 112 ~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 180 (370)
T 3psg_A 112 SQELSITYG-TGS-MTGILGYDTVQVGGI---------SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPV 180 (370)
T ss_dssp EEEEEEESS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCH
T ss_pred CcEEEEEeC-Cce-EEEEEEEEEEeeCCc---------ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCH
Confidence 689999997 554 899999999999876 7889999999876322 223568999999998654 6
Q ss_pred HHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEE
Q 014679 177 PSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVH 253 (420)
Q Consensus 177 ~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~ 253 (420)
..+|.+++.| +++||+||.+. .+|.|+|||+|+ .+|.|++.|+|+.. ..+|.|.+++|+
T Consensus 181 ~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~-----~~y~g~l~~~pv~~-------------~~~w~v~l~~i~ 242 (370)
T 3psg_A 181 FDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDS-----SYYTGSLNWVPVSV-------------EGYWQITLDSIT 242 (370)
T ss_dssp HHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCG-----GGBSSCCEEEECSE-------------ETTEEEEECEEE
T ss_pred HHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeCh-----HhcCCcceeecccc-------------cceeEEEEeEEE
Confidence 7889999988 79999999985 589999999997 56789999999975 368999999999
Q ss_pred ECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCc
Q 014679 254 VNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVV 333 (420)
Q Consensus 254 vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 333 (420)
|+++.+... +.+.+|+||||+++++|++++++|.+++.+... .......+|... ..+
T Consensus 243 v~g~~~~~~---------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~-----~~g~~~v~C~~~---------~~l 299 (370)
T 3psg_A 243 MDGETIACS---------GGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN-----SDGEMVISCSSI---------DSL 299 (370)
T ss_dssp SSSSEEECT---------TCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC-----TTCCEECCGGGG---------GGC
T ss_pred ECCEEEecC---------CCceEEEcCCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEECCCc---------ccC
Confidence 999876532 146899999999999999999999888754321 111123567654 368
Q ss_pred CeEEEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 334 PQIDLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 334 P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
|+|+|+|+| ++++||+++|+++ . +..|+ ++..... ..++.||||++|||++|+|||++++|||||++
T Consensus 300 P~i~f~~~g--~~~~l~~~~yi~~-~-~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a 369 (370)
T 3psg_A 300 PDIVFTIDG--VQYPLSPSAYILQ-D-DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPV 369 (370)
T ss_dssp CCEEEEETT--EEEEECHHHHEEE-C-SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CcEEEEECC--EEEEECHHHhccc-C-CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEc
Confidence 999999987 9999999999998 3 34698 4554321 12347999999999999999999999999975
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5e-54 Score=417.95 Aligned_cols=303 Identities=18% Similarity=0.254 Sum_probs=243.2
Q ss_pred eEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCC
Q 014679 32 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGIC 105 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~ 105 (420)
+.+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..++ +.++....|
T Consensus 2 ~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~~ 69 (324)
T 1am5_A 2 VTEQMKN-EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-----------AQACSNHNKFKPRQSSTYVETGK 69 (324)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-----------SHHHHTSCCBCGGGCTTCEEEEE
T ss_pred ceeeeec-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-----------cccccCCCcCCCccCCCeEeCCc
Confidence 5688886 46889999999999999999999999999999998662 23343222 223334568
Q ss_pred cceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccC-CCCCcceEEecCCCCCc------cHH
Q 014679 106 GAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQG-LASGVVGIAGLGRSKVA------LPS 178 (420)
Q Consensus 106 ~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------~~~ 178 (420)
.|.+.|+ ++ ++.|.+++|+|+|++. +++++.|||++...... .....+||||||++..+ ++.
T Consensus 70 ~~~i~Yg-~G-s~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 138 (324)
T 1am5_A 70 TVDLTYG-TG-GMRGILGQDTVSVGGG---------SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFD 138 (324)
T ss_dssp EEEEECS-SC-EEEEEEEEEEEESSSS---------CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHH
T ss_pred EEEEEEC-CC-CeEEEEEECceeECCc---------EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHH
Confidence 9999997 65 4599999999999875 78899999998763221 23468999999997653 678
Q ss_pred HHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEEC
Q 014679 179 QLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVN 255 (420)
Q Consensus 179 ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg 255 (420)
+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|+|+
T Consensus 139 ~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~ 200 (324)
T 1am5_A 139 NMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDN-----SHYTGSIHWIPVTA-------------EKYWQVALDGITVN 200 (324)
T ss_dssp HHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCG-----GGBCSCCEEEEEEE-------------ETTEEEEECEEEET
T ss_pred hHHhcCCCCCCEEEEEecCCCCCCcEEEECccCH-----HHcCCceEEEecCC-------------CcEEEEEEeEEEEC
Confidence 89999888 79999999885 589999999986 56789999999975 35899999999999
Q ss_pred CEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCe
Q 014679 256 GKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQ 335 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 335 (420)
++.+... + ..+||||||++++||++++++|.+++.+. . .. .....+|+.. ..+|+
T Consensus 201 ~~~~~~~---------~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~-g~~~~~C~~~---------~~~P~ 255 (324)
T 1am5_A 201 GQTAACE---------G-CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQ-GEMMGNCASV---------QSLPD 255 (324)
T ss_dssp TEECCCC---------C-EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CC-CCEECCTTSS---------SSSCC
T ss_pred Cceeecc---------C-ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cC-CcEEEeCCCc---------ccCCc
Confidence 9875321 1 57999999999999999999999988654 1 11 1123568754 36899
Q ss_pred EEEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 336 IDLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 336 i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
|+|+|+| .+++||+++|+++. +..|+ ++..... ...+.||||++|||++|+|||++++|||||++
T Consensus 256 i~f~f~g--~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a 323 (324)
T 1am5_A 256 ITFTING--VKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPA 323 (324)
T ss_dssp EEEEETT--EEEEECHHHHEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEB
T ss_pred EEEEECC--EEEEECHHHhcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEEC
Confidence 9999976 99999999999986 46798 6665431 12357999999999999999999999999975
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.6e-54 Score=419.70 Aligned_cols=304 Identities=13% Similarity=0.144 Sum_probs=241.8
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~ 104 (420)
...+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..++ +.++....
T Consensus 3 ~~~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~ 70 (323)
T 3cms_A 3 VASVPLTN-YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-----------SNACKNHQRFDPRKSSTFQNLG 70 (323)
T ss_dssp CEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------SHHHHTSCCBCGGGCTTCEEEE
T ss_pred cceeeeEe-ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-----------cccccCCCCCCCccCCCeEECC
Confidence 34578886 46789999999999999999999999999999998662 33343322 22333556
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccC-CCCCcceEEecCCCCC------ccH
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQG-LASGVVGIAGLGRSKV------ALP 177 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~------s~~ 177 (420)
|.|.+.|+ ++ ++.|.+++|+|+|++. +++++.|||++...... .....+||||||++.. +++
T Consensus 71 ~~~~i~Yg-~G-s~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 139 (323)
T 3cms_A 71 KPLSIHYG-TG-SMQGILGYDTVTVSNI---------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVF 139 (323)
T ss_dssp EEEEEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHH
T ss_pred cEEEEEeC-CC-CeEEEEEEEEEEECCe---------EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHH
Confidence 89999997 65 4899999999999875 78899999998762211 1245799999999764 467
Q ss_pred HHHhhhcCC-CCceEEecCCC-CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEEC
Q 014679 178 SQLAAAFSL-KRKFALCLSPF-DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVN 255 (420)
Q Consensus 178 ~ql~~~~~i-~~~Fs~~L~~~-~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg 255 (420)
.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|+|+
T Consensus 140 ~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~ 201 (323)
T 3cms_A 140 DNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDP-----SYYTGSLHWVPVTV-------------QQYWQFTVDSVTIS 201 (323)
T ss_dssp HHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCG-----GGEEEEEEEEECSS-------------BTTBEEEEEEEEET
T ss_pred HHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCh-----hhccCceEEEECcc-------------CCeEEEEEeeEEEC
Confidence 889999888 79999999886 459999999986 46778999999974 36899999999999
Q ss_pred CEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCe
Q 014679 256 GKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQ 335 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~ 335 (420)
++.+.++. ...+||||||++++||++++++|.+++.+.. . .......+|+.. ..+|+
T Consensus 202 ~~~~~~~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~-~~g~~~~~C~~~---------~~~P~ 258 (323)
T 3cms_A 202 GVVVACEG---------GCQAILDTGTSKLVGPSSDILNIQQAIGATQ----N-QYGEFDIDCDNL---------SYMPT 258 (323)
T ss_dssp TEEEESTT---------CEEEEECTTCCSEEECHHHHHHHHHHHTCEE----E-TTTEEEECTTCT---------TTSCC
T ss_pred CEEeecCC---------CcEEEEecCCccEeCCHHHHHHHHHHhCCee----c-CCCcEEEECCCC---------ccCce
Confidence 98875432 3579999999999999999999999885431 1 111122467754 36899
Q ss_pred EEEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 336 IDLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 336 i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
|+|+|+| ++++||+++|+++ .+..|+ ++..... .+.||||++|||++|+|||++++|||||++
T Consensus 259 i~f~f~g--~~~~i~~~~y~~~--~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 322 (323)
T 3cms_A 259 VVFEING--KMYPLTPSAYTSQ--DQGFCTSGFQSENH--SQKWILGDVFIREYYSVFDRANNLVGLAKA 322 (323)
T ss_dssp EEEEETT--EEEEECHHHHEEE--ETTEEEESEEEC-----CCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEEECC--EEEEECHHHhccC--CCCEEEEEEEeCCC--CCcEEECHHHhhceEEEEECCCCEEEEEEC
Confidence 9999976 9999999999998 346798 4766432 357999999999999999999999999975
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.7e-53 Score=415.12 Aligned_cols=304 Identities=16% Similarity=0.204 Sum_probs=241.0
Q ss_pred eEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCC
Q 014679 32 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGIC 105 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~ 105 (420)
..+||++. .+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..+. +.++....|
T Consensus 3 ~~~~l~~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~~ 70 (329)
T 1dpj_A 3 HDVPLTNY-LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-----------SLACFLHSKYDHEASSSYKANGT 70 (329)
T ss_dssp EEEECEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------SHHHHTSCCBCGGGCTTCEEEEE
T ss_pred cceeeeec-CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-----------CcccCCcCcCCcccCcCeEECCc
Confidence 46788863 5789999999999999999999999999999998663 22343222 223334568
Q ss_pred cceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccc-cCCCCCcceEEecCCCCCc------cHH
Q 014679 106 GAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVL-QGLASGVVGIAGLGRSKVA------LPS 178 (420)
Q Consensus 106 ~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~GIlGLg~~~~s------~~~ 178 (420)
.|.+.|+ ++ .+.|.+++|+|+|++. +++++.|||++.... .......+||||||++..+ +..
T Consensus 71 ~~~i~Yg-~G-s~~G~~~~D~v~ig~~---------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~ 139 (329)
T 1dpj_A 71 EFAIQYG-TG-SLEGYISQDTLSIGDL---------TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFY 139 (329)
T ss_dssp EEEEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHH
T ss_pred EEEEEEC-Cc-eEEEEEEEEEEEECCe---------EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHH
Confidence 9999997 65 7999999999999875 788999999987532 1123468999999998765 456
Q ss_pred HHhhhcCC-CCceEEecCCC-----CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 179 QLAAAFSL-KRKFALCLSPF-----DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 179 ql~~~~~i-~~~Fs~~L~~~-----~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|
T Consensus 140 ~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i 201 (329)
T 1dpj_A 140 NAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDE-----SKFKGDITWLPVRR-------------KAYWEVKFEGI 201 (329)
T ss_dssp HHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCG-----GGEEEEEEEEECSS-------------BTTBEEEEEEE
T ss_pred HHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCCh-----hhcCCceEEEEcCC-------------CceEEEEeeeE
Confidence 78888888 69999999764 379999999986 56778999999974 36899999999
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCC
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPV 332 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 332 (420)
+|+++.+... ...+||||||++++||++++++|.+++.+.. .. ......+|+.. ..
T Consensus 202 ~v~~~~~~~~----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~-~g~~~~~C~~~---------~~ 257 (329)
T 1dpj_A 202 GLGDEYAELE----------SHGAAIDTGTSLITLPSGLAEMINAEIGAKK----GW-TGQYTLDCNTR---------DN 257 (329)
T ss_dssp EETTEEEECS----------SCEEEECTTCSCEEECHHHHHHHHHHHTCEE----CT-TSSEEECGGGG---------GG
T ss_pred EECCeEecCC----------CccEEeeCCCCcEECCHHHHHHHHHHhCCcc----CC-CCeEEEECCCC---------Cc
Confidence 9999877531 3679999999999999999999999886431 11 11111356543 36
Q ss_pred cCeEEEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 333 VPQIDLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 333 ~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+|+|+|+|+| .+++||+++|+++.. ..|+ ++..... ...+.||||++|||++|+|||++++|||||++
T Consensus 258 ~P~i~f~f~g--~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 328 (329)
T 1dpj_A 258 LPDLIFNFNG--YNFTIGPYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKA 328 (329)
T ss_dssp CCCEEEEETT--EEEEECTTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEECC--EEEEECHHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEEC
Confidence 8999999987 899999999999875 5798 5665421 12468999999999999999999999999975
No 13
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.4e-54 Score=420.23 Aligned_cols=308 Identities=17% Similarity=0.216 Sum_probs=241.6
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCC--CCCCCCCccccCCCCcccCcccc------CCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCE--KGYVSSTNKTARCGSAQCNLANA------KACGG 102 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~--~c~~Sst~~~~~c~~~~C~~~~~------~~c~~ 102 (420)
.+.+|+++ .+.+|+++|.||||+|++.|+|||||+++||+|. .|..... ...+..|..++. .++..
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~~SsT~~~ 75 (342)
T 2qzx_A 2 PVAVTLHN--EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWR----GDKGDFCKSAGSYSPASSRTSQN 75 (342)
T ss_dssp CEEEEEEE--CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSS----SCCTTGGGTTCCBCGGGCTTCEE
T ss_pred ceeEEEec--CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccc----cCccccccCCCcCCcccCCCccc
Confidence 57889998 5789999999999999999999999999999865 4521100 001224443322 23334
Q ss_pred CCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCC--------
Q 014679 103 GICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKV-------- 174 (420)
Q Consensus 103 ~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~-------- 174 (420)
..|.|.+.|+ +|+.+.|.+++|+|+|++. +++++.|||++.. ...+||||||++..
T Consensus 76 ~~~~~~i~Yg-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~------~~~~GilGLg~~~~~~~~~~~~ 139 (342)
T 2qzx_A 76 LNTRFDIKYG-DGSYAKGKLYKDTVGIGGV---------SVRDQLFANVWST------SARKGILGIGFQSGEATEFDYD 139 (342)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEE------CSSSCEEECSCGGGCSSSSCCC
T ss_pred CCCcEEEEeC-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEec------CCCcCEEEEccccccCCCccCc
Confidence 5789999998 8888999999999999875 7889999999875 24799999999754
Q ss_pred ccHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeE
Q 014679 175 ALPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTS 251 (420)
Q Consensus 175 s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~ 251 (420)
+++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+..+ .+|.|.+++
T Consensus 140 ~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~-------------~~~~v~l~~ 201 (342)
T 2qzx_A 140 NLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDK-----AKYSGSLVDLPITSE-------------KKLTVGLRS 201 (342)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET-----TSBSSCCEEEECCCS-------------SSCEEEEEE
T ss_pred cHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccch-----hhEecceEEEeccCC-------------ceEEEEEeE
Confidence 688999999988 68999999874 689999999986 567899999999753 489999999
Q ss_pred EEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCC
Q 014679 252 VHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGP 331 (420)
Q Consensus 252 i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 331 (420)
|.|+++.+.. ...+||||||++++||++++++|.+++.+... ..+..+.....+|+
T Consensus 202 i~v~g~~~~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~~~~~~~~~C~------------ 257 (342)
T 2qzx_A 202 VNVRGRNVDA-----------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMK-FDSAGNKVYVADCK------------ 257 (342)
T ss_dssp EEETTEEEEE-----------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE-ECTTSCEEEEECTT------------
T ss_pred EEECCEecCC-----------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee-eccCCCcEEEEECC------------
Confidence 9999988753 24699999999999999999999999876432 11111101123454
Q ss_pred CcCeEEEEEeCCceEEEEccCceEEEeC-----CCeEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCC
Q 014679 332 VVPQIDLVLQNKNVVWSIHGQNSMVQIG-----GDALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLL 406 (420)
Q Consensus 332 ~~P~i~f~f~g~~~~~~i~~~~y~~~~~-----~~~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~ 406 (420)
.+|.|+|+|++ +.+++||+++|+++.. .+..|+..+... +.||||++|||++|+|||++++|||||++.+
T Consensus 258 ~~p~i~f~f~~-g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~ 332 (342)
T 2qzx_A 258 TSGTIDFQFGN-NLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKY 332 (342)
T ss_dssp CCCEEEEEETT-TEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCC
T ss_pred CCCcEEEEECC-CcEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCC
Confidence 26899999965 4999999999999742 235798644432 2599999999999999999999999997655
Q ss_pred c
Q 014679 407 F 407 (420)
Q Consensus 407 ~ 407 (420)
.
T Consensus 333 ~ 333 (342)
T 2qzx_A 333 T 333 (342)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-53 Score=415.31 Aligned_cols=307 Identities=18% Similarity=0.179 Sum_probs=233.4
Q ss_pred EEEe-eCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCC-cccCccccCCCCC-CCCcceec
Q 014679 34 LRVA-KDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGS-AQCNLANAKACGG-GICGAGPD 110 (420)
Q Consensus 34 ~p~~-~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~-~~C~~~~~~~c~~-~~~~~~~~ 110 (420)
+++. ....+.+|+++|.||||+|++.|+|||||+++||+|..|... .|.. +......+.++.. +.|.|.+.
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~------~~~~~~~y~~~~SsT~~~~~~~~~~i~ 78 (329)
T 3c9x_A 5 APNHPSDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKS------SATGHAIYTPSKSSTSKKVSGASWSIS 78 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHH------HHTTSCCBCGGGCTTCEECTTCBEEEE
T ss_pred eeeecCCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCcc------ccCCCCcCCcccCcCceEcCCCeEEEE
Confidence 4444 445688999999999999999999999999999999877210 0100 0000011223333 46899999
Q ss_pred cCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc---------cHHHH
Q 014679 111 NPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA---------LPSQL 180 (420)
Q Consensus 111 y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 180 (420)
|+ +++.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +.++|
T Consensus 79 Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 79 YG-DGSSSSGDVYTDKVTIGGF---------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp CT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred eC-CCCcEEEEEEEEEEEECCE---------EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 98 8888999999999999875 788999999987532211 1468999999997544 56677
Q ss_pred hhhcCC-CCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEe
Q 014679 181 AAAFSL-KRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAV 259 (420)
Q Consensus 181 ~~~~~i-~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~ 259 (420)
.++ + +++||+||.+...|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|+++.+
T Consensus 149 ~~~--i~~~~FS~~l~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~~~v~l~~i~v~~~~~ 209 (329)
T 3c9x_A 149 ASS--LAEPLFTADLRHGQNGSYNFGYIDT-----SVAKGPVAYTPVDNS------------QGFWEFTASGYSVGGGKL 209 (329)
T ss_dssp HTT--SSSSEEEEECCSSSCEEEEESSCCG-----GGCSSCEEEEECBCT------------TSSCEEEECCEEETTCCC
T ss_pred HHh--cCCCEEEEEecCCCCcEEEEeCcCh-----hhcccceEEEEccCC------------CceEEEEEeeEEECCEec
Confidence 764 5 79999999886689999999986 567899999999743 468999999999999765
Q ss_pred ecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEEE
Q 014679 260 PLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDLV 339 (420)
Q Consensus 260 ~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~ 339 (420)
.. ....+||||||++++||++++++|.+++..+. +....+ ....+|+ ..+|+|+|+
T Consensus 210 ~~----------~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~-~~~~~C~-----------~~~P~i~f~ 265 (329)
T 3c9x_A 210 NR----------NSIDGIADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQE-GVVFDCD-----------EDLPSFSFG 265 (329)
T ss_dssp CS----------CCEEEEECTTCCSEEECHHHHHHHHTTCTTCE--EETTTT-EEEEETT-----------CCCCCEEEE
T ss_pred cC----------CCceEEEECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCC-EEEEECC-----------CCCCcEEEE
Confidence 31 13579999999999999999998877763221 111111 1123576 248999999
Q ss_pred EeCCceEEEEccCceEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccccEEEEeCCCCeEEEee
Q 014679 340 LQNKNVVWSIHGQNSMVQIGG--DALCLG-FVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSD 403 (420)
Q Consensus 340 f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~ 403 (420)
|+| .+++||+++|++...+ ...|++ +..... .+.||||++|||++|+|||++++|||||+
T Consensus 266 f~g--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 266 VGS--STITIPGDLLNLTPLEEGSSTCFGGLQSSSG--IGINIFGDVALKAALVVFDLGNERLGWAQ 328 (329)
T ss_dssp ETT--EEEEECGGGGEEEESSTTCSEEEESEEECTT--TTSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ECC--EEEEECHHHeeeeccCCCCCeEEEEEEcCCC--CCcEEEChHHhccEEEEEECCCCEEeEec
Confidence 987 9999999999987633 368986 555432 35799999999999999999999999996
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4.6e-54 Score=417.47 Aligned_cols=301 Identities=16% Similarity=0.148 Sum_probs=237.2
Q ss_pred EEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc------CCCCCCCCcc
Q 014679 34 LRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA------KACGGGICGA 107 (420)
Q Consensus 34 ~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~------~~c~~~~~~~ 107 (420)
.||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..+.. .++....|.|
T Consensus 3 ~~l~n-~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~~~~ 70 (320)
T 4aa9_A 3 EPLTS-YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-----------SNVCKNHHRFDPRKSSTFRNLGKPL 70 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------SHHHHTSCCBCGGGCTTCEEEEEEE
T ss_pred cccee-ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-----------ccccCCCCCCCCCCCcCeEcCCcEE
Confidence 46775 45889999999999999999999999999999998662 333433221 2233456889
Q ss_pred eeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCC------ccHHHH
Q 014679 108 GPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKV------ALPSQL 180 (420)
Q Consensus 108 ~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~------s~~~ql 180 (420)
.+.|+ +++ +.|.+++|+|+|++. +++++.|||++..... ......+||||||++.. ++..+|
T Consensus 71 ~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 139 (320)
T 4aa9_A 71 SIHYG-TGS-MEGFLGYDTVTVSNI---------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNM 139 (320)
T ss_dssp EEEET-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHH
T ss_pred EEEEC-CcE-EEEEEEEEEEEECCE---------eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHH
Confidence 99997 554 899999999999885 7889999999876321 11245799999998754 478899
Q ss_pred hhhcCC-CCceEEecCCC-CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEE
Q 014679 181 AAAFSL-KRKFALCLSPF-DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKA 258 (420)
Q Consensus 181 ~~~~~i-~~~Fs~~L~~~-~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~ 258 (420)
.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|.|+++.
T Consensus 140 ~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~l~~i~v~~~~ 201 (320)
T 4aa9_A 140 MDRHLVARDLFSVYMDRNGQGSMLTLGAIDP-----SYYTGSLHWVPVTL-------------QQYWQFTVDSVTINGVA 201 (320)
T ss_dssp HHTTCSSSSEEEEECCSSSSCCEEEETCCCG-----GGEEEEEEEEECSS-------------BTTBEEEECEEEETTEE
T ss_pred HhCCCCCCceEEEEeCCCCCCeEEEEcccCH-----HHccCceEEEEccc-------------CCceEEEEeEEEECCEE
Confidence 999988 78999999985 689999999986 56789999999974 46899999999999988
Q ss_pred eecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEE
Q 014679 259 VPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDL 338 (420)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f 338 (420)
+..+. ...+||||||++++||++++++|.+++.+... .......+|+.. ..+|+|+|
T Consensus 202 ~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~g~~~~~C~~~---------~~~p~i~f 258 (320)
T 4aa9_A 202 VACVG---------GCQAILDTGTSVLFGPSSDILKIQMAIGATEN-----RYGEFDVNCGNL---------RSMPTVVF 258 (320)
T ss_dssp EESTT---------CEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC-----TTSCEEECGGGG---------GGCCCEEE
T ss_pred eccCC---------CcEEEEECCCCcEECCHHHHHHHHHHhCCccc-----CCCcEEEeCCCC---------CcCceEEE
Confidence 76431 35799999999999999999999988754321 111123467754 35899999
Q ss_pred EEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 339 VLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 339 ~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+|+| ++++||+++|+.+. +..|+ ++..... .+.||||++|||++|+|||++++|||||++
T Consensus 259 ~f~g--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~a 319 (320)
T 4aa9_A 259 EING--RDYPLSPSAYTSKD--QGFCTSGFQGDNN--SELWILGDVFIREYYSVFDRANNRVGLAKA 319 (320)
T ss_dssp EETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EECC--EEEEECHHHhccCC--CCeEEEEEEcCCC--CCcEEEChHHhcceEEEEECCCCEEEEEec
Confidence 9987 99999999999873 45798 4665332 357999999999999999999999999975
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.5e-53 Score=417.38 Aligned_cols=311 Identities=18% Similarity=0.215 Sum_probs=247.3
Q ss_pred CceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc------CCCCC
Q 014679 29 PKALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA------KACGG 102 (420)
Q Consensus 29 ~~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~------~~c~~ 102 (420)
.+.+.+||++. .+.+|+++|.||||||++.|+|||||+++||+|..|... +..|..... .++..
T Consensus 5 ~~~~~~~l~n~-~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~---------~~~C~~~~~y~~~~SsT~~~ 74 (341)
T 3k1w_A 5 NTTSSVILTNY-MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRL---------YTACVYHKLFDASDSSSYKH 74 (341)
T ss_dssp CBCEEEEEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTT---------CHHHHTSCCBCGGGCTTCEE
T ss_pred CCCccccceEc-cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCC---------CCcccCCCCCCCCcCcCeeE
Confidence 45778999974 588999999999999999999999999999999877310 223432221 23334
Q ss_pred CCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCCc------
Q 014679 103 GICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA------ 175 (420)
Q Consensus 103 ~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------ 175 (420)
..|.|.+.|+ +++ +.|.+++|+|+|++. ++ ++.|||++..... ......+||||||++..+
T Consensus 75 ~~~~~~i~Yg-~gs-~~G~~~~D~v~ig~~---------~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 75 NGTELTLRYS-TGT-VSGFLSQDIITVGGI---------TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp EEEEEEEEET-TEE-EEEEEEEEEEEETTE---------EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred CCCEEEEEEC-CcE-EEEEEEEEEEEECCc---------ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCC
Confidence 5789999997 554 999999999999876 77 9999999876322 223467999999998654
Q ss_pred cHHHHhhhcCC-CCceEEecCCCC------CceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeE
Q 014679 176 LPSQLAAAFSL-KRKFALCLSPFD------DGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIG 248 (420)
Q Consensus 176 ~~~ql~~~~~i-~~~Fs~~L~~~~------~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~ 248 (420)
++.+|.+++.| +++||+||.+.. .|.|+|||+|+ .++.|++.|+|+.. ..+|.|.
T Consensus 143 ~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~ 204 (341)
T 3k1w_A 143 IFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDP-----QHYEGNFHYINLIK-------------TGVWQIQ 204 (341)
T ss_dssp HHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCG-----GGEEEEEEEEECSS-------------TTSCEEE
T ss_pred HHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccCh-----HHccCceEEEecCC-------------CCEEEEE
Confidence 68899999888 789999998763 89999999986 56789999999974 4689999
Q ss_pred EeEEEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccc
Q 014679 249 VTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTR 328 (420)
Q Consensus 249 l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 328 (420)
+++|.|+++.+.... ...+||||||++++||++++++|.+++.+... ..+ ...+|...
T Consensus 205 l~~i~v~~~~~~~~~---------~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g--~~~~C~~~------- 262 (341)
T 3k1w_A 205 MKGVSVGSSTLLCED---------GCLALVDTGASYISGSTSSIEKLMEALGAKKR----LFD--YVVKCNEG------- 262 (341)
T ss_dssp ECCEEETTEEEECTT---------CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----SSC--EEEEGGGG-------
T ss_pred EeEEEECCEEeecCC---------CCEEEEECCCChhcCCHHHHHHHHHHcCCeec----CCC--eEEeCCCC-------
Confidence 999999998754321 35799999999999999999999998864321 111 23457643
Q ss_pred cCCCcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEee
Q 014679 329 IGPVVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSD 403 (420)
Q Consensus 329 ~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~ 403 (420)
..+|+|+|+|+| ++++||+++|+++... +..|+ ++..... ...+.||||++|||++|+|||++++|||||+
T Consensus 263 --~~~p~i~f~f~g--~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~ 338 (341)
T 3k1w_A 263 --PTLPDISFHLGG--KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFAL 338 (341)
T ss_dssp --GGCCCEEEEETT--EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred --CcCCcEEEEECC--EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEE
Confidence 358999999997 9999999999987542 57898 5665321 1235799999999999999999999999998
Q ss_pred cC
Q 014679 404 SL 405 (420)
Q Consensus 404 ~~ 405 (420)
++
T Consensus 339 a~ 340 (341)
T 3k1w_A 339 AR 340 (341)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.1e-53 Score=416.39 Aligned_cols=303 Identities=18% Similarity=0.229 Sum_probs=240.3
Q ss_pred EEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCCcc
Q 014679 34 LRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGICGA 107 (420)
Q Consensus 34 ~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~~~ 107 (420)
+||+ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..++ +.++....|.|
T Consensus 5 ~~l~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~~~~ 71 (329)
T 1htr_B 5 EPMA--YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-----------SQACTSHSRFNPSESSTYSTNGQTF 71 (329)
T ss_dssp CGGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------SHHHHTSCCBCGGGCTTCEEEEEEE
T ss_pred eeeE--EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-----------CcccCCCCcCCCccCCCeEECCcEE
Confidence 5666 46889999999999999999999999999999998662 23343222 22333456899
Q ss_pred eeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccC-CCCCcceEEecCCCCCc------cHHHH
Q 014679 108 GPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQG-LASGVVGIAGLGRSKVA------LPSQL 180 (420)
Q Consensus 108 ~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~~GIlGLg~~~~s------~~~ql 180 (420)
.+.|+ ++ ++.|.+++|+|+|++. +++++.|||++...... .....+||||||++..+ ++.+|
T Consensus 72 ~i~Yg-~g-s~~G~~~~D~v~~g~~---------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 72 SLQYG-SG-SLTGFFGYDTLTVQSI---------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp EEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred EEEeC-CC-CeEEEEEeeeEEEcce---------EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 99997 55 4699999999999875 78899999998763221 23468999999998654 67889
Q ss_pred hhhcCC-CCceEEecCCCC---CceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECC
Q 014679 181 AAAFSL-KRKFALCLSPFD---DGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNG 256 (420)
Q Consensus 181 ~~~~~i-~~~Fs~~L~~~~---~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~ 256 (420)
.+++.| +++||+||.+.. .|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|+|++
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~~ 202 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDS-----SLYTGQIYWAPVTQ-------------ELYWQIGIEEFLIGG 202 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSSEEEEEEESSCCG-----GGEEEEEEEEEBCS-------------SSSCEEEECEEEETT
T ss_pred HhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCH-----HHcCCceEEEECCC-------------CceEEEEEeEEEECC
Confidence 999888 799999998862 79999999986 46778999999974 368999999999999
Q ss_pred EEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeE
Q 014679 257 KAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQI 336 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i 336 (420)
+.+... .....+||||||++++||++++++|.+++.+... .......+|+.. ..+|+|
T Consensus 203 ~~~~~~--------~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~-----~~g~~~~~C~~~---------~~~P~i 260 (329)
T 1htr_B 203 QASGWC--------SEGCQAIVDTGTSLLTVPQQYMSALLQATGAQED-----EYGQFLVNCNSI---------QNLPSL 260 (329)
T ss_dssp EECCTT--------TTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEEC-----TTSCEEECGGGG---------GGSCCE
T ss_pred ceeeec--------CCCceEEEecCCccEECCHHHHHHHHHHhCCeec-----CCCeEEEeCCCc---------ccCCcE
Confidence 875411 1136799999999999999999999998864321 111123568764 258999
Q ss_pred EEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCC--CCCC-ceeechhhccccEEEEeCCCCeEEEeec
Q 014679 337 DLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGV--NPRT-SIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 337 ~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~--~~~~-~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+|+|+| ++++||+++|+++.. + .|+ ++..... ..++ .||||++|||++|+|||++++|||||++
T Consensus 261 ~f~f~g--~~~~i~~~~y~~~~~-g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~ 328 (329)
T 1htr_B 261 TFIING--VEFPLPPSSYILSNN-G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATA 328 (329)
T ss_dssp EEEETT--EEEEECHHHHEEECS-S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEECC--EEEEECHHHhcccCC-C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeC
Confidence 999976 999999999999876 4 898 5665331 1134 7999999999999999999999999975
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-52 Score=410.45 Aligned_cols=302 Identities=15% Similarity=0.218 Sum_probs=240.1
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCC--CCCCCCccccCCCCcccCccc------cCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEK--GYVSSTNKTARCGSAQCNLAN------AKACGG 102 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~--c~~Sst~~~~~c~~~~C~~~~------~~~c~~ 102 (420)
++.+||++ .+.+|+++|.||||||++.|+|||||+++||++.. |.. | ..|...+ +.++..
T Consensus 2 ~i~~~l~~--~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~--------~--~~C~~~~~y~~~~SsT~~~ 69 (339)
T 3fv3_A 2 SISLSLIN--EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGK--------G--VDCKSSGTFTPSSSSSYKN 69 (339)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECT--------T--CCTTTTCCBCGGGCTTCEE
T ss_pred ceeeEEEc--CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCC--------C--CCCCCCCcCCCccCcceee
Confidence 57899998 46899999999999999999999999999998432 210 0 0222211 122224
Q ss_pred CCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCCc-------
Q 014679 103 GICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKVA------- 175 (420)
Q Consensus 103 ~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s------- 175 (420)
..|.|.+.|+ +++.+.|.+++|+|+|++. +++++.|||++... ..+||||||++..+
T Consensus 70 ~~~~~~i~Yg-~gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~ 133 (339)
T 3fv3_A 70 LGAAFTIRYG-DGSTSQGTWGKDTVTINGV---------SITGQQIADVTQTS------VDQGILGIGYTSNEAVYDTSG 133 (339)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCCCBCTTS
T ss_pred CCceEEEEEC-CCceEEEEEEEEEEEECCE---------EECceEEEEEEecC------CCceeEEecCccccccccccc
Confidence 4688999998 8889999999999999876 78899999998762 36999999997643
Q ss_pred ---------cHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCc
Q 014679 176 ---------LPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSV 243 (420)
Q Consensus 176 ---------~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~ 243 (420)
++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..
T Consensus 134 ~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~ 195 (339)
T 3fv3_A 134 RQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDN-----AKYSGKLVAEQVTS-------------SQ 195 (339)
T ss_dssp CBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEET-----TSBSSCCEEEEBCC-------------SS
T ss_pred cccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeech-----HHeecceEEEeccc-------------Cc
Confidence 78899999999 68999999876 589999999986 57789999999975 34
Q ss_pred ceEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecC
Q 014679 244 EYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQD 323 (420)
Q Consensus 244 ~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 323 (420)
+|.|.+++|.|+++.+.. ...+||||||++++||++++++|.+++.+....... .......+|+.
T Consensus 196 ~~~v~l~~i~v~g~~~~~-----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~-~~~~~~~~C~~--- 260 (339)
T 3fv3_A 196 ALTISLASVNLKGSSFSF-----------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVAR-DQYLYFIDCNT--- 260 (339)
T ss_dssp SCEEEEEEEEESSCEEEE-----------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEET-TEEEEEECTTC---
T ss_pred cEEEEEEEEEECCEeecC-----------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccc-cCceEEEecCC---
Confidence 899999999999987653 246999999999999999999999999754321000 11112346764
Q ss_pred CCccccCCCcCeEEEEEeCCceEEEEccCceEEEeCCCeEE-EEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEe
Q 014679 324 IGFTRIGPVVPQIDLVLQNKNVVWSIHGQNSMVQIGGDALC-LGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFS 402 (420)
Q Consensus 324 ~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C-~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa 402 (420)
..+|+|+|+|++ +++++||+++|+++..+ ..| +++.+ . +.||||+.|||++|+|||++++|||||
T Consensus 261 -------~~~p~i~f~f~~-g~~~~v~~~~~~~~~~~-~~C~~~i~~-~----~~~ilG~~fl~~~y~vfD~~~~~igfA 326 (339)
T 3fv3_A 261 -------DTSGTTVFNFGN-GAKITVPNTEYVYQNGD-GTCLWGIQP-S----DDTILGDNFLRHAYLLYNLDANTISIA 326 (339)
T ss_dssp -------CCCSEEEEEETT-SCEEEEEGGGGEEECSS-SCEEESEEE-C----SSCEECHHHHTTEEEEEETTTTEEEEE
T ss_pred -------CCCCcEEEEECC-CCEEEECHHHheeeCCC-CeEEEEEEe-C----CcEEeChHHHhCEEEEEECCCCEEEEE
Confidence 248999999975 49999999999998654 457 46766 2 369999999999999999999999999
Q ss_pred ecCCc
Q 014679 403 DSLLF 407 (420)
Q Consensus 403 ~~~~~ 407 (420)
++.+.
T Consensus 327 ~~~~~ 331 (339)
T 3fv3_A 327 QVKYT 331 (339)
T ss_dssp EBCCC
T ss_pred ecCCC
Confidence 65554
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.1e-53 Score=412.25 Aligned_cols=307 Identities=17% Similarity=0.152 Sum_probs=232.7
Q ss_pred EEEe-eCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccCCCCC-CCCcceecc
Q 014679 34 LRVA-KDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKACGG-GICGAGPDN 111 (420)
Q Consensus 34 ~p~~-~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~~c~~-~~~~~~~~y 111 (420)
++++ ....+.+|+++|.||||+|++.|+|||||+++||+|..|... .|.........+.++.. +.|.|.+.|
T Consensus 5 v~~~~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~------~~~~~~y~~~~SsT~~~~~~~~~~i~Y 78 (329)
T 1oew_A 5 ATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTAS------EVXQTIYTPSKSTTAKLLSGATWSISY 78 (329)
T ss_dssp EEEEESSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGG------GC-CCCBCGGGCTTCEEEEEEEEEEEC
T ss_pred eEeeecCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcc------ccccCccCCccCccceecCCCeEEEEe
Confidence 3444 444678999999999999999999999999999999877311 11111111111223333 468899999
Q ss_pred CCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc---------cHHHHh
Q 014679 112 PISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA---------LPSQLA 181 (420)
Q Consensus 112 ~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql~ 181 (420)
+ +|+.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +.++|.
T Consensus 79 g-~Gs~~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 148 (329)
T 1oew_A 79 G-DGSSSSGDVYTDTVSVGGL---------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAK 148 (329)
T ss_dssp T-TSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHT
T ss_pred C-CCCcEEEEEEEEEEEECCE---------EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHH
Confidence 8 8888999999999999875 788999999987532211 1457999999997544 557777
Q ss_pred hhcCC-CCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEee
Q 014679 182 AAFSL-KRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAVP 260 (420)
Q Consensus 182 ~~~~i-~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~~ 260 (420)
++ + +++||+||.+...|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|+++.+.
T Consensus 149 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~~~v~l~~i~v~~~~~~ 209 (329)
T 1oew_A 149 AS--LDSPVFTADLGYHAPGTYNFGFIDT-----TAYTGSITYTAVSTK------------QGFWEWTSTGYAVGSGTFK 209 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESCCCT-----TSSSSCCEEEECBCT------------TSSCEEEEEEEEETTSCCE
T ss_pred Hh--ccCcEEEEEccCCCCeEEEEeccCh-----HhcccceEEEEccCC------------CceEEEEEeeEEECCeecc
Confidence 65 5 79999999886689999999986 567899999999743 4689999999999997653
Q ss_pred cCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEEEE
Q 014679 261 LNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDLVL 340 (420)
Q Consensus 261 ~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f 340 (420)
. . ...+||||||++++||++++++|.+++..+. +....+ ....+|+ ..+|+|+|+|
T Consensus 210 ~--~--------~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g-~~~~~C~-----------~~~P~i~f~f 265 (329)
T 1oew_A 210 S--T--------SIDGIADTGTTLLYLPATVVSAYWAQVSGAK--SSSSVG-GYVFPCS-----------ATLPSFTFGV 265 (329)
T ss_dssp E--E--------EEEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETTTT-EEEEETT-----------CCCCCEEEEE
T ss_pred C--C--------CceEEEeCCCCCEECCHHHHHHHHHhCCCcE--EcCCCC-EEEEECC-----------CCCCcEEEEE
Confidence 1 1 3579999999999999999998887763221 111111 1124576 2489999999
Q ss_pred eCCceEEEEccCceEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccccEEEEeC-CCCeEEEee
Q 014679 341 QNKNVVWSIHGQNSMVQIGG--DALCLG-FVDGGVNPRTSIVIGARQLENNLLQFDL-ATSRLGFSD 403 (420)
Q Consensus 341 ~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~y~vfD~-e~~rIGfa~ 403 (420)
+| .+++||+++|++...+ ...|++ +..... .+.||||++|||++|+|||+ +++|||||+
T Consensus 266 gg--~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 266 GS--ARIVIPGDYIDFGPISTGSSSCFGGIQSSAG--IGINIFGDVALKAAFVVFNGATTPTLGFAS 328 (329)
T ss_dssp TT--EEEEECHHHHEEEESSTTCSEEEESEEESTT--TSSEEECHHHHTTEEEEEECSSSCEEEEEE
T ss_pred CC--EEEEECHHHeeeeecCCCCCeEEEEEEeCCC--CCceEEChHHhcCEEEEEECCCCceEEEec
Confidence 65 9999999999987632 468986 554432 35799999999999999999 999999996
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=7.7e-53 Score=412.60 Aligned_cols=309 Identities=16% Similarity=0.215 Sum_probs=238.2
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCC--CCCCCCccccCCCCcccCcccc------CCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEK--GYVSSTNKTARCGSAQCNLANA------KACGG 102 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~--c~~Sst~~~~~c~~~~C~~~~~------~~c~~ 102 (420)
++.+|+.+ .+.+|+++|.||||||++.|+|||||+++||+|.. |..... ......|...+. .++..
T Consensus 2 ~v~~~l~~--~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~----~~~~~~C~~~~~y~~~~SsT~~~ 75 (342)
T 3pvk_A 2 AVPVTLHN--EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYS----DQTADFCKQKGTYDPSGSSASQD 75 (342)
T ss_dssp CEEEEEEE--CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCST----TCCTTGGGTTCCBCGGGCTTCEE
T ss_pred CcceEEec--CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccc----ccccCCCCCCCcCCCccCcceee
Confidence 47788887 57899999999999999999999999999998543 311000 001223433322 22234
Q ss_pred CCCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCC-------Cc
Q 014679 103 GICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSK-------VA 175 (420)
Q Consensus 103 ~~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~-------~s 175 (420)
..|.|.+.|+ +++.+.|.+++|+|+|++. +++++.|||++... ..+||||||++. .+
T Consensus 76 ~~~~~~i~Yg-~gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~------~~~GilGLg~~~~~~~~~~~~ 139 (342)
T 3pvk_A 76 LNTPFKIGYG-DGSSSQGTLYKDTVGFGGV---------SIKNQVLADVDSTS------IDQGILGVGYKTNEAGGSYDN 139 (342)
T ss_dssp EEEEEEEECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEES------SSSCEEECSCGGGCSSCSSCC
T ss_pred cCCeEEEEec-CCCeEEEEEEEEEEEECCE---------EecceEEEEEEccC------CCccEEEecCccccccccCCc
Confidence 5689999998 8888999999999999875 78899999998752 479999999986 46
Q ss_pred cHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 176 LPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 176 ~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+... .+|.|.+++|
T Consensus 140 ~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~-------------~~~~v~l~~i 201 (342)
T 3pvk_A 140 VPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDN-----AKYSGSLIALPVTSD-------------RELRISLGSV 201 (342)
T ss_dssp HHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEET-----TSBSSCCEEEECCCS-------------SSCEEEEEEE
T ss_pred HHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCc-----cceeeeeEEeecCcc-------------ceEEEEEeEE
Confidence 89999999988 68999999875 579999999986 578899999999753 4899999999
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCC
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPV 332 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 332 (420)
.|+++.+..+ ...+||||||++++||++++++|.+++.+.... ..........+|+ .
T Consensus 202 ~v~g~~~~~~----------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~-~~~~~~~~~~~C~------------~ 258 (342)
T 3pvk_A 202 EVSGKTINTD----------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQ-DSNGNSFYEVDCN------------L 258 (342)
T ss_dssp EETTEEEEEE----------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEE-CTTSCEEEEECSC------------C
T ss_pred EECCEEecCC----------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecc-cCCCceEEEEecC------------C
Confidence 9999987642 247999999999999999999999988654320 0000001223454 2
Q ss_pred cCeEEEEEeCCceEEEEccCceEEEeC--CC---eEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 333 VPQIDLVLQNKNVVWSIHGQNSMVQIG--GD---ALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 333 ~P~i~f~f~g~~~~~~i~~~~y~~~~~--~~---~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
.|+|+|+|++ +.+++||+++|+++.. .+ ..|+..+... +.||||+.|||++|+|||++++|||||+..+.
T Consensus 259 ~p~i~f~f~~-g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 259 SGDVVFNFSK-NAKISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp CSEEEEEEST-TCEEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred CCceEEEECC-CCEEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 5899999996 4899999999998732 22 5797444322 36999999999999999999999999965544
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4e-53 Score=418.97 Aligned_cols=303 Identities=16% Similarity=0.233 Sum_probs=242.5
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc------CCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA------KACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~------~~c~~~~ 104 (420)
...+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..+.. .++....
T Consensus 51 ~~~~pl~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~C~~~~~y~~~~SsT~~~~~ 118 (375)
T 1miq_A 51 NDVIELDD-VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-----------SSGCSIKNLYDSSKSKSYEKDG 118 (375)
T ss_dssp TBCCCGGG-TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-----------SSGGGGSCCBCGGGCTTCEEEE
T ss_pred cceEEccc-CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-----------cccccCCCcCCCccCCceEECC
Confidence 35578885 46789999999999999999999999999999998662 334443322 2333456
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccc----ccccCCCCCcceEEecCCCCCc-----
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSE----FVLQGLASGVVGIAGLGRSKVA----- 175 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~s----- 175 (420)
|.|.+.|+ +|+ +.|.+++|+|+|++. ++++ .|||++. .. .......+||||||++..+
T Consensus 119 ~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~ 185 (375)
T 1miq_A 119 TKVDITYG-SGT-VKGFFSKDLVTLGHL---------SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSID 185 (375)
T ss_dssp EEEEEEET-TEE-EEEEEEEEEEEETTE---------EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCC
T ss_pred cEEEEEeC-CCe-EEEEEEEEEEEEcCc---------eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCC
Confidence 89999997 655 899999999999875 7888 9999987 42 1112457999999998654
Q ss_pred -cHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeE
Q 014679 176 -LPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTS 251 (420)
Q Consensus 176 -~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~ 251 (420)
++.+|.+++.| +++||+||.+. ..|.|+|||+|. .++.|++.|+|+.. ..+|.|.++
T Consensus 186 ~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~l~- 246 (375)
T 1miq_A 186 PIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEE-----KFYEGNITYEKLNH-------------DLYWQIDLD- 246 (375)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG-----GGEEEEEEEEEBSS-------------SSSSEEEEE-
T ss_pred CHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCH-----HHcCCceEEEecCC-------------CceEEEEEE-
Confidence 67889999988 69999999986 489999999986 46778999999964 469999999
Q ss_pred EEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCC
Q 014679 252 VHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGP 331 (420)
Q Consensus 252 i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 331 (420)
|.|+++.+ . ...+||||||++++||++++++|.+++.+... ...+ ....+|+. .
T Consensus 247 i~v~g~~~----~--------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~~~g-~~~~~C~~----------~ 300 (375)
T 1miq_A 247 VHFGKQTM----E--------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV---PFLP-FYVTTCDN----------K 300 (375)
T ss_dssp EEETTEEE----E--------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC---TTSS-CEEEETTC----------T
T ss_pred EEECCEEc----c--------cceEEecCCCccEEcCHHHHHHHHHHhCCccc---CCCC-eEEEECCC----------C
Confidence 99999876 1 35799999999999999999999999865321 1111 12356775 1
Q ss_pred CcCeEEEEEeCCceEEEEccCceEEEeC--CCeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCC
Q 014679 332 VVPQIDLVLQNKNVVWSIHGQNSMVQIG--GDALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLL 406 (420)
Q Consensus 332 ~~P~i~f~f~g~~~~~~i~~~~y~~~~~--~~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~ 406 (420)
.+|+|+|+|+| ++++||+++|+++.. ++..|+ ++...... .+.||||++|||++|+|||++++|||||+++|
T Consensus 301 ~~P~i~f~f~g--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~n 375 (375)
T 1miq_A 301 EMPTLEFKSAN--NTYTLEPEYYMNPILEVDDTLCMITMLPVDID-SNTFILGDPFMRKYFTVFDYDKESVGFAIAKN 375 (375)
T ss_dssp TCCCEEEECSS--CEEEECGGGSEEESSSSSCSEEEESEEECCSS-SSEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred CCCcEEEEECC--EEEEECHHHhEeeccCCCCCeEEEEEEECCCC-CCcEEECHHHhccEEEEEECCCCEEEEEEcCC
Confidence 58999999976 999999999999875 245898 77765431 25799999999999999999999999998653
No 22
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-51 Score=401.17 Aligned_cols=302 Identities=14% Similarity=0.127 Sum_probs=232.6
Q ss_pred EEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccCC-----CCCCCCcce
Q 014679 34 LRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKA-----CGGGICGAG 108 (420)
Q Consensus 34 ~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~~-----c~~~~~~~~ 108 (420)
++++....+.+|+++|.|| ||++.|+|||||+++||+|..|. +..|..+..+. +....|.|.
T Consensus 5 v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~~Ss~~~~~~~~~ 71 (325)
T 1ibq_A 5 AVTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-----------SSEQTGHDLYTPSSSATKLSGYSWD 71 (325)
T ss_dssp EEEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-----------HHHHTTSCCCBCCSSCEECTTCBEE
T ss_pred EEeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-----------ccccCCCCCCCchhcCCccCCCEEE
Confidence 3444444678999999999 89999999999999999998763 11222221111 113579999
Q ss_pred eccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc---------cHH
Q 014679 109 PDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA---------LPS 178 (420)
Q Consensus 109 ~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ 178 (420)
+.|+ +++.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +.+
T Consensus 72 i~Yg-~Gs~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 141 (325)
T 1ibq_A 72 ISYG-DGSSASGDVYRDTVTVGGV---------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFD 141 (325)
T ss_dssp EECS-SSCEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred EEeC-CCCEEEEEEEEeEEEECCE---------EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHH
Confidence 9998 8888999999999999875 788999999987632211 1468999999997654 567
Q ss_pred HHhhhcCCCCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEE
Q 014679 179 QLAAAFSLKRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKA 258 (420)
Q Consensus 179 ql~~~~~i~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~ 258 (420)
+|.++ ..+++||+||.+...|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|+++.
T Consensus 142 ~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~w~v~l~~i~v~~~~ 203 (325)
T 1ibq_A 142 TVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDD-----SKYTGSITYTDADSS------------QGYWGFSTDGYSIGDGS 203 (325)
T ss_dssp HHGGG-SSSSEEEEEEETTEEEEEEESSCCG-----GGBSSCCEEEECBCT------------TSSCEEEECEEEETTSC
T ss_pred HHHHh-cCCcEEEEEecCCCCceEEECCcCh-----hhccCceEEEEcCCC------------CceEEEEECcEEECCee
Confidence 88775 2279999999886689999999986 567899999999743 46899999999999976
Q ss_pred eecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEE
Q 014679 259 VPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDL 338 (420)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f 338 (420)
+.. ....+||||||++++||++++++|.+++..+. +....+ ....+|+ ..+|+|+|
T Consensus 204 ~~~----------~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g-~~~~~C~-----------~~~P~i~f 259 (325)
T 1ibq_A 204 SSS----------SGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAG-GYVFSCS-----------TDLPDFTV 259 (325)
T ss_dssp CBS----------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCB--CCSSSS-SCEEETT-----------CCCCCEEE
T ss_pred ccC----------CCceEEEeCCCCcEeCCHHHHHHHHHhCCCce--EcCcCC-eEEEEcC-----------CCCCcEEE
Confidence 531 13579999999999999999999988774221 111111 1224676 24899999
Q ss_pred EEeCCceEEEEccCceEEEeCC--CeEEEE-EEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 339 VLQNKNVVWSIHGQNSMVQIGG--DALCLG-FVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 339 ~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+|+| .+++||+++|++...+ ...|++ +..... .+.||||++|||++|+|||++++|||||++
T Consensus 260 ~fgg--~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 260 VIGD--YKAVVPGKYINYAPVSTGSSTCYGGIQSNSG--LGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp EETT--EEEEECHHHHEEEESSTTCSEEEESEEECTT--TCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred EECC--EEEEECHHHhcccccCCCCCeEEEEEEcCCC--CCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 9966 9999999999987633 368986 555432 357999999999999999999999999974
No 23
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2.2e-51 Score=401.85 Aligned_cols=302 Identities=16% Similarity=0.227 Sum_probs=234.8
Q ss_pred eEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccCCCCCCCCcceecc
Q 014679 32 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKACGGGICGAGPDN 111 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~~c~~~~~~~~~~y 111 (420)
-.+||++. +.+|+++|.||||||++.|+|||||+++||+|.+.+.++. .+....|.|.+.|
T Consensus 3 ~~~~l~n~--~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~~y~~s~-----------------Ss~~~~~~~~i~Y 63 (340)
T 1wkr_A 3 GSVPATNQ--LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGADKSYVKTS-----------------TSSATSDKVSVTY 63 (340)
T ss_dssp EEEEEEEC--SSCEEEEEEETTTTEEEEEEEETTCCCCEECSSSCCCCCT-----------------TCEEEEEEEEEEC
T ss_pred ccEeeecc--CcEEEEEEEECCCCcEEEEEEeCCChhheecCCCccCCcC-----------------CccccCceEEEEE
Confidence 35788873 6799999999999999999999999999999874332111 0012358899999
Q ss_pred CCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCCc--------------cH
Q 014679 112 PISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKVA--------------LP 177 (420)
Q Consensus 112 ~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s--------------~~ 177 (420)
+ +++ +.|.+++|+|+|++. +++++.|||++... + ....+||||||++..+ ++
T Consensus 64 g-~Gs-~~G~~~~Dtv~~g~~---------~v~~~~fg~~~~~~--~-~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~ 129 (340)
T 1wkr_A 64 G-SGS-FSGTEYTDTVTLGSL---------TIPKQSIGVASRDS--G-FDGVDGILGVGPVDLTVGTLSPHTSTSIPTVT 129 (340)
T ss_dssp S-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEEE--S-CTTCSEEEECSCGGGGTTSEESCTTCCCCCHH
T ss_pred C-CcE-EEEEEEEEEEEECCE---------EEcceEEEEEEccC--C-CcCCCcEEECCccccccccccccccccCCCHH
Confidence 7 665 899999999999875 78899999998863 2 2368999999987644 47
Q ss_pred HHHhhhcCC-CCceEEecCCC-----CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeE
Q 014679 178 SQLAAAFSL-KRKFALCLSPF-----DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTS 251 (420)
Q Consensus 178 ~ql~~~~~i-~~~Fs~~L~~~-----~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~ 251 (420)
.+|.+++.| +++||+||.+. ..|.|+|||+|+ .+|.|++.|+|+..+.. ...+|.|. .+
T Consensus 130 ~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~~~---------~~~~w~v~-~~ 194 (340)
T 1wkr_A 130 DNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDS-----SKYTGSITYTPITSTSP---------ASAYWGIN-QS 194 (340)
T ss_dssp HHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCG-----GGCSSCCEEEECCSSTT---------GGGSSEEE-EE
T ss_pred HHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccCh-----hhcccceEEEECccCCC---------CcceEEEE-ee
Confidence 789999988 68999999863 479999999986 56789999999987531 25799999 99
Q ss_pred EEECC-EEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccC
Q 014679 252 VHVNG-KAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIG 330 (420)
Q Consensus 252 i~vg~-~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 330 (420)
|.|++ +.+.. ...+||||||++++||++++++|.+++.+... . .......+|...
T Consensus 195 i~v~~~~~l~~-----------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~-~~g~~~~~C~~~--------- 250 (340)
T 1wkr_A 195 IRYGSSTSILS-----------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD---N-NTGLLRLTTAQY--------- 250 (340)
T ss_dssp EEETTTEEEEE-----------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC---T-TTSSEEECHHHH---------
T ss_pred EEECCCeEccC-----------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc---C-CCCeEEeecccc---------
Confidence 99998 77641 24799999999999999999999888764321 1 011122467643
Q ss_pred CCcCeEEEEEeCCceEEEEccCceEEEeC-------CCeEEE-EEEeCCCC--CCCceeechhhccccEEEEeCCCCeEE
Q 014679 331 PVVPQIDLVLQNKNVVWSIHGQNSMVQIG-------GDALCL-GFVDGGVN--PRTSIVIGARQLENNLLQFDLATSRLG 400 (420)
Q Consensus 331 ~~~P~i~f~f~g~~~~~~i~~~~y~~~~~-------~~~~C~-~~~~~~~~--~~~~~ILG~~flr~~y~vfD~e~~rIG 400 (420)
..+|+|+|+|+| .+++|+|++|+++.. ....|. .+...... .+..||||++|||++|+|||++++|||
T Consensus 251 ~~~p~i~f~f~g--~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ig 328 (340)
T 1wkr_A 251 ANLQSLFFTIGG--QTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLG 328 (340)
T ss_dssp HTCCCEEEEETT--EEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEE
T ss_pred ccCCcEEEEECC--EEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEE
Confidence 258999999987 899999999998643 123564 56553221 124699999999999999999999999
Q ss_pred EeecCCc
Q 014679 401 FSDSLLF 407 (420)
Q Consensus 401 fa~~~~~ 407 (420)
||+....
T Consensus 329 fA~~~~~ 335 (340)
T 1wkr_A 329 LATTSFT 335 (340)
T ss_dssp EEECTTT
T ss_pred EEecCCC
Confidence 9976544
No 24
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.3e-51 Score=405.58 Aligned_cols=320 Identities=18% Similarity=0.193 Sum_probs=236.4
Q ss_pred EEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCC-CCccccCCCCcccCccccCCCCCCCCcceeccCC
Q 014679 35 RVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVS-STNKTARCGSAQCNLANAKACGGGICGAGPDNPI 113 (420)
Q Consensus 35 p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~S-st~~~~~c~~~~C~~~~~~~c~~~~~~~~~~y~~ 113 (420)
||+.+ .+.+|+++|.||||||++.|+|||||+++||+|..|... ..|.+ ..+.++....|.|.+.|+
T Consensus 6 ~l~~~-~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~~~f~~----------~~SsT~~~~~~~~~i~Yg- 73 (383)
T 2ewy_A 6 NLQGD-SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYIDTYFDT----------ERSSTYRSKGFDVTVKYT- 73 (383)
T ss_dssp CEEEE-TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBSCCCCG----------GGCTTCEEEEEEEEEECS-
T ss_pred eccCC-CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccccCccc----------ccCccceeCCceEEEEEC-
Confidence 44543 456899999999999999999999999999999877310 01111 011222234688999997
Q ss_pred CCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc--------cHHHHhhhc
Q 014679 114 SNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA--------LPSQLAAAF 184 (420)
Q Consensus 114 ~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s--------~~~ql~~~~ 184 (420)
+++ +.|.+++|+|+|++.. .+.+ .+.|++......... ....+||||||++.++ +..+|.+++
T Consensus 74 ~Gs-~~G~~~~Dtv~i~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~ 145 (383)
T 2ewy_A 74 QGS-WTGFVGEDLVTIPKGF------NTSF-LVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQA 145 (383)
T ss_dssp SCE-EEEEEEEEEEEETTTE------EEEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHH
T ss_pred CcE-EEEEEEEEEEEECCCc------ccee-EEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHcc
Confidence 654 6999999999997631 0122 356888754421111 1357999999987653 566898888
Q ss_pred CCCCceEEecCC---------CCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEEC
Q 014679 185 SLKRKFALCLSP---------FDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVN 255 (420)
Q Consensus 185 ~i~~~Fs~~L~~---------~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg 255 (420)
.++++||+||.+ ...|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|+|+
T Consensus 146 ~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~ 207 (383)
T 2ewy_A 146 NIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEP-----SLYKGDIWYTPIKE-------------EWYYQIEILKLEIG 207 (383)
T ss_dssp TCCSCEEEEECCC---------CCEEEEETSCCG-----GGCCSCEEEEECSS-------------BTTBBCCEEEEEET
T ss_pred CCCcceEEEeeccccccccCCCCCeEEEeCccch-----hhccCccEEEecCC-------------CceEEEEEEEEEEC
Confidence 888899999853 1589999999986 56789999999975 35899999999999
Q ss_pred CEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCC---CCCCCcceeecCCCccccCCC
Q 014679 256 GKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAP---VAPFGACFRLQDIGFTRIGPV 332 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~ 332 (420)
++.+.++...+. ...+||||||++++||+++|++|++++.+... .++... .....+|+...... ...
T Consensus 208 g~~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~~~----~~~ 277 (383)
T 2ewy_A 208 GQSLNLDCREYN-----ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL-IPEFSDGFWTGSQLACWTNSETP----WSY 277 (383)
T ss_dssp TEECCCCTTTTT-----SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC-SSCCCHHHHHTSEEEEECSSSCG----GGG
T ss_pred CEEccccccccC-----CccEEEEcCCccccCCHHHHHHHHHHHhhhcc-cccCccccccccccccccCCccc----Hhh
Confidence 998876543321 35799999999999999999999999988653 111111 11245798764321 136
Q ss_pred cCeEEEEEeCC----ceEEEEccCceEEEeC---CCeEEEEE--EeCCCCCCCceeechhhccccEEEEeCCCCeEEEee
Q 014679 333 VPQIDLVLQNK----NVVWSIHGQNSMVQIG---GDALCLGF--VDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSD 403 (420)
Q Consensus 333 ~P~i~f~f~g~----~~~~~i~~~~y~~~~~---~~~~C~~~--~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~ 403 (420)
+|+|+|+|+++ +++++||+++|+++.. .+..|+++ .+. .+.||||++|||++|+|||++++|||||+
T Consensus 278 ~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~ 353 (383)
T 2ewy_A 278 FPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS----TNALVIGATVMEGFYVIFDRAQKRVGFAA 353 (383)
T ss_dssp SCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC----CCcEEEChHHhCCeeEEEECCCCeEEEEe
Confidence 89999999983 2589999999999864 25679753 332 24699999999999999999999999996
Q ss_pred cCC
Q 014679 404 SLL 406 (420)
Q Consensus 404 ~~~ 406 (420)
+.+
T Consensus 354 ~~c 356 (383)
T 2ewy_A 354 SPC 356 (383)
T ss_dssp CTT
T ss_pred ccC
Confidence 544
No 25
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.1e-51 Score=417.62 Aligned_cols=324 Identities=18% Similarity=0.235 Sum_probs=241.7
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~ 104 (420)
...+||++. .+.+|+++|.||||||+|.|+|||||+++||+|..|.. +..|..++ +.++....
T Consensus 41 ~~~~~l~n~-~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----------~~~C~~~~~y~~~~SsT~~~~~ 109 (478)
T 1qdm_A 41 GDIVALKNY-MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----------SIACYLHSRYKAGASSTYKKNG 109 (478)
T ss_dssp SCSGGGCCG-GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----------CGGGGGSCCBCGGGCTTCBCCC
T ss_pred CceEEeEec-cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----------CccccCCCCCCcccCCCeeeCC
Confidence 345777763 57899999999999999999999999999999987731 12333222 23444667
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCCc------cH
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA------LP 177 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------~~ 177 (420)
|.|.+.|+ +| ++.|.+++|+|+|++. +++++.|||++..... ......+||||||++.++ +.
T Consensus 110 ~~~~i~Yg-~G-s~~G~~~~Dtv~ig~~---------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~ 178 (478)
T 1qdm_A 110 KPAAIQYG-TG-SIAGYFSEDSVTVGDL---------VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVW 178 (478)
T ss_dssp CEEEEEET-TE-EEEEEEEEEEEEETTE---------EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHH
T ss_pred cEEEEEcC-CC-CeEEEEEEEEEEECCe---------EECCEEEEEEEecCCcccccccccceecccccccccCCCCcHH
Confidence 89999997 55 4899999999999875 7889999999875321 123467999999998765 45
Q ss_pred HHHhhhcCC-CCceEEecCCC----CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 178 SQLAAAFSL-KRKFALCLSPF----DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 178 ~ql~~~~~i-~~~Fs~~L~~~----~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
.+|.+++.| +++||+||.+. ..|.|+|||+|. .++.|++.|+|+.. .++|.|.+++|
T Consensus 179 ~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~-----~~~~G~l~~~pv~~-------------~~~w~v~l~~i 240 (478)
T 1qdm_A 179 YKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDP-----KHYVGEHTYVPVTQ-------------KGYWQFDMGDV 240 (478)
T ss_dssp HHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCT-----TSEEEEEEEEEEEE-------------ETTEEEEECCE
T ss_pred HHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCH-----hhcCCCceEEeccC-------------CCeEEEEEeEE
Confidence 678888888 69999999874 489999999986 46778999999974 36999999999
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCC----------------------cc-cc-
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMP----------------------KV-AR- 308 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~----------------------~~-~~- 308 (420)
.|+++.+.+.. +..++|+||||++++||++++++|.+++.+... .. +.
T Consensus 241 ~v~g~~~~~~~--------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~ 312 (478)
T 1qdm_A 241 LVGGKSTGFCA--------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKK 312 (478)
T ss_dssp EETTEECSTTT--------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHH
T ss_pred EECCEEEeecC--------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhh
Confidence 99998865432 136899999999999999999999988854210 00 00
Q ss_pred -----------------------cCC-------CC-------------------------------CCCcceeecCCC-c
Q 014679 309 -----------------------VAP-------VA-------------------------------PFGACFRLQDIG-F 326 (420)
Q Consensus 309 -----------------------~~~-------~~-------------------------------~~~~C~~~~~~~-~ 326 (420)
++. .. ....|+..+... .
T Consensus 313 vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~ 392 (478)
T 1qdm_A 313 ICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGE 392 (478)
T ss_dssp HHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSC
T ss_pred hhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCe
Confidence 000 00 001233222100 0
Q ss_pred c----ccCCCcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEEE-EEeCCC--CCCCceeechhhccccEEEEeCCCC
Q 014679 327 T----RIGPVVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCLG-FVDGGV--NPRTSIVIGARQLENNLLQFDLATS 397 (420)
Q Consensus 327 ~----~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~ 397 (420)
. .....+|+|+|+|+| ++|+|+|++|+++... +..|++ +..... ..++.||||++|||++|+|||++++
T Consensus 393 ~~v~C~~~~~lP~i~f~~gg--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~ 470 (478)
T 1qdm_A 393 SAVDCGSLGSMPDIEFTIGG--KKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKL 470 (478)
T ss_dssp CEECGGGGTTCCCEEEEETT--EEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTT
T ss_pred EEeecccccccccEEEEECC--EEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCC
Confidence 0 001369999999987 9999999999998754 357985 654331 1246899999999999999999999
Q ss_pred eEEEeec
Q 014679 398 RLGFSDS 404 (420)
Q Consensus 398 rIGfa~~ 404 (420)
|||||++
T Consensus 471 rIGfA~a 477 (478)
T 1qdm_A 471 RIGFAKA 477 (478)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 9999974
No 26
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=6.6e-52 Score=417.33 Aligned_cols=305 Identities=15% Similarity=0.204 Sum_probs=240.4
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCcccc------CCCCCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANA------KACGGGI 104 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~------~~c~~~~ 104 (420)
...+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|. +..|..++. .++....
T Consensus 127 ~~~~~L~n-~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-----------~~~C~~~~~ydps~SsT~~~~~ 194 (453)
T 2bju_A 127 NDNIELVD-FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-----------TAGCLTKHLYDSSKSRTYEKDG 194 (453)
T ss_dssp SEEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-----------STTGGGSCCBCGGGCTTCEEEE
T ss_pred CCceeeEe-cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-----------ccccCCCCcCCCccCCceeECC
Confidence 35688885 36789999999999999999999999999999998662 334433322 2333456
Q ss_pred CcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccc--cc-CCCCCcceEEecCCCCC------c
Q 014679 105 CGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFV--LQ-GLASGVVGIAGLGRSKV------A 175 (420)
Q Consensus 105 ~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~--~~-~~~~~~~GIlGLg~~~~------s 175 (420)
|.|.+.|+ +|+ +.|.+++|+|+|++. +++ +.|||++... +. ......+||||||++.. +
T Consensus 195 ~~~~i~Yg-dGs-~~G~~~~Dtv~ig~~---------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 262 (453)
T 2bju_A 195 TKVEMNYV-SGT-VSGFFSKDLVTVGNL---------SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDP 262 (453)
T ss_dssp EEEEEECS-SSE-EEEEEEEEEEEETTE---------EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCC
T ss_pred cEEEEEcC-CCC-eEEEEEEEEEEEeCc---------EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCc
Confidence 89999997 655 899999999999875 788 9999998763 21 11245899999998754 4
Q ss_pred cHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 176 LPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 176 ~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.++ |
T Consensus 263 ~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~-----~~y~G~l~~~pv~~-------------~~~w~V~l~-I 323 (453)
T 2bju_A 263 IVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEE-----RFYEGPLTYEKLNH-------------DLYWQITLD-A 323 (453)
T ss_dssp HHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCG-----GGEEEEEEEEEEEE-------------ETTEEEEEE-E
T ss_pred HHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCH-----HHcCCceEEEecCC-------------CceEEEEEE-E
Confidence 67889999988 69999999985 589999999986 46778999999974 369999999 9
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCC
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPV 332 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 332 (420)
.|+++ + + . ..++|+||||++++||++++++|.+++.+. +...+.....+|+. ..
T Consensus 324 ~Vgg~-~-~--~--------~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v~C~~----------~~ 377 (453)
T 2bju_A 324 HVGNI-M-L--E--------KANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNN----------SK 377 (453)
T ss_dssp EETTE-E-E--E--------EEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTC----------TT
T ss_pred EECcE-E-e--c--------cccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCceEEEecCC----------CC
Confidence 99993 3 1 1 367999999999999999999988776432 11111122346764 25
Q ss_pred cCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 333 VPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 333 ~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
+|+|+|+|+| .+++||+++|+++... +..|+ ++.+.... .+.||||++|||++|+|||++++|||||++.++
T Consensus 378 ~P~itf~fgg--~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~~n 452 (453)
T 2bju_A 378 LPTFEFTSEN--GKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFP-VPTFILGDPFMRKYFTVFDYDNHSVGIALAKKN 452 (453)
T ss_dssp CCCEEEECSS--CEEEECHHHHEEECTTTSTTEEEECEEECCCS-SCEEEECHHHHHHEEEEEETTTTEEEEEEECSC
T ss_pred CCcEEEEECC--EEEEECHHHhEeecccCCCceEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEcccc
Confidence 8999999976 9999999999998753 46898 66665421 348999999999999999999999999987643
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.9e-52 Score=404.73 Aligned_cols=303 Identities=16% Similarity=0.174 Sum_probs=237.8
Q ss_pred eeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCccc--CccccCC-----CCCC
Q 014679 31 ALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQC--NLANAKA-----CGGG 103 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C--~~~~~~~-----c~~~ 103 (420)
++.+||++ ..+.+|+++|.|| ||++.|+|||||+++||+|..|. +..| ..+..+. +...
T Consensus 6 ~~~~~l~n-~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~C~~~~~~~y~~~~ST~~~~ 71 (330)
T 1yg9_A 6 PLYKLVHV-FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-----------GGACVCPNLQKYEKLKPKYISD 71 (330)
T ss_dssp CSCSCEEE-EECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-----------SGGGGSTTCCCCCCSSCEEEEE
T ss_pred eeEeeeec-CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-----------CccCcccccCccCCCCCceEEC
Confidence 45567775 3567999999999 89999999999999999998663 2344 3332222 2234
Q ss_pred CCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCCCCCcceEEecCCCCCc-------c
Q 014679 104 ICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGLASGVVGIAGLGRSKVA-------L 176 (420)
Q Consensus 104 ~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~~s-------~ 176 (420)
.|.|.+.|+ +++ +.|.+++|+|+|++. +++++.|||++...........+||||||++..+ +
T Consensus 72 ~~~~~i~Yg-~Gs-~~G~~~~Dtv~ig~~---------~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 140 (330)
T 1yg9_A 72 GNVQVKFFD-TGS-AVGRGIEDSLTISQL---------TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTV 140 (330)
T ss_dssp EEEEEEETT-TEE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCH
T ss_pred CCEEEEEEC-Cce-EEEEEEEEEEEECCE---------EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCH
Confidence 578999997 554 599999999999875 7889999999876211112457999999998766 7
Q ss_pred HHHHhhhcCCCCceEEecCCC--C--CceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEE
Q 014679 177 PSQLAAAFSLKRKFALCLSPF--D--DGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSV 252 (420)
Q Consensus 177 ~~ql~~~~~i~~~Fs~~L~~~--~--~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i 252 (420)
+++|.+++.|+++||+||.+. . .|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|
T Consensus 141 ~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~l~~i 202 (330)
T 1yg9_A 141 LENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDW-----KYVDGEFTYVPLVG-------------DDSWKFRLDGV 202 (330)
T ss_dssp HHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCG-----GGEEEEEEEEEBSC-------------TTSCCEECSEE
T ss_pred HHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCH-----HHccCceEEEECCC-------------CCEEEEEeCeE
Confidence 889999987789999999875 2 79999999986 56778999999973 46999999999
Q ss_pred EECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCC-CCC-CCcceeecCCCccccC
Q 014679 253 HVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAP-VAP-FGACFRLQDIGFTRIG 330 (420)
Q Consensus 253 ~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~-~~~-~~~C~~~~~~~~~~~~ 330 (420)
.|+++.+. . ....+||||||++++||++++++|.+++.+.. . ..+ ... ..+|+..
T Consensus 203 ~v~~~~~~-~---------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~-~~g~~~~~~~~C~~~--------- 259 (330)
T 1yg9_A 203 KIGDTTVA-P---------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV---E-KTTTRRICKLDCSKI--------- 259 (330)
T ss_dssp EETTEEEE-C---------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE---E-ECSSCEEEEECGGGG---------
T ss_pred EECCEEEc-C---------CCcEEEEecCCccccCCHHHHHHHHHHhCCcc---c-CCCceEEEEEECCCc---------
Confidence 99998764 1 13679999999999999999999999985432 1 111 011 2457643
Q ss_pred CCcCeEEEEEeCCceEEEEccCceEEEeCCCeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecC
Q 014679 331 PVVPQIDLVLQNKNVVWSIHGQNSMVQIGGDALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSL 405 (420)
Q Consensus 331 ~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~ 405 (420)
..+|+|+|+|+| ++++||+++|+++. +..|+ ++..... .+.||||++|||++|+|||++++|||||+++
T Consensus 260 ~~~p~i~f~fgg--~~~~l~~~~y~~~~--~~~C~~~i~~~~~--~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 260 PSLPDVTFVING--RNFNISSQYYIQQN--GNLCYSGFQPCGH--SDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp GGSCCEEEEETT--EEEEECHHHHEEEE--TTEEEESEEEETT--CSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccCcEEEEECC--EEEEECHHHhcccC--CCcEEEEEEeCCC--CCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 358999999976 99999999999987 46798 5555322 3579999999999999999999999999753
No 28
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.2e-51 Score=396.97 Aligned_cols=294 Identities=15% Similarity=0.131 Sum_probs=227.8
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccCCCC-----CCCCcceeccCCCC
Q 014679 41 ATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKACG-----GGICGAGPDNPISN 115 (420)
Q Consensus 41 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~~c~-----~~~~~~~~~y~~~~ 115 (420)
.+.+|+++|.|| ||++.|+|||||+++||+|..|. +..|..+..+.+. .+.|.|.+.|+ +|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg-~G 78 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-----------SSERSGHDYYTPGSSAQKIDGATWSISYG-DG 78 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-----------HHHHTTCCCBCCCTTCEEEEEEEEEEECT-TS
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-----------cccccCCCCCCccccCCccCCCeEEEEcC-CC
Confidence 568999999999 79999999999999999998762 1123222222111 24689999998 88
Q ss_pred ceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc---------cHHHHhhhcC
Q 014679 116 TGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA---------LPSQLAAAFS 185 (420)
Q Consensus 116 ~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql~~~~~ 185 (420)
+.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++.++ +.++|.++ .
T Consensus 79 s~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i 148 (323)
T 1izd_A 79 SSASGDVYKDKVTVGGV---------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS-L 148 (323)
T ss_dssp CEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-S
T ss_pred CeEEEEEEEEEEEECCE---------EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh-c
Confidence 88999999999999875 788999999987632211 1457999999997554 46778765 3
Q ss_pred CCCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEeecCccc
Q 014679 186 LKRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAVPLNKTL 265 (420)
Q Consensus 186 i~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 265 (420)
.+++||+||.+...|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|++ .+..
T Consensus 149 ~~~~FS~~L~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~w~v~l~~i~v~~-~~~~---- 206 (323)
T 1izd_A 149 SEPIFAVALKHNAPGVYDFGYTDS-----SKYTGSITYTDVDNS------------QGFWGFTADGYSIGS-DSSS---- 206 (323)
T ss_dssp SSSEEEEECCTTSCEEEEESSCCT-----TSEEEEEEEEECBCT------------TSSCEEEESEEEETT-EEEC----
T ss_pred cCcEEEEEccCCCCCEEEECCcCc-----cccccceEEEECCCC------------CceEEEEECeEEECC-cccC----
Confidence 369999999986689999999986 467789999999743 468999999999999 4421
Q ss_pred cccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEEEEeCCce
Q 014679 266 LSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDLVLQNKNV 345 (420)
Q Consensus 266 ~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~ 345 (420)
....+|+||||++++||++++++|.+++..+. +....+ ....+|+ ..+|+|+|+|+| .
T Consensus 207 ------~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g-~~~~~C~-----------~~~P~i~f~fgg--~ 264 (323)
T 1izd_A 207 ------DSITGIADTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQG-GYVFPSS-----------ASLPDFSVTIGD--Y 264 (323)
T ss_dssp ------CCEEEEECTTCCSEEECHHHHHHHHTTSTTCE--EETTTT-EEEEETT-----------CCCCCEEEEETT--E
T ss_pred ------CCceEEEeCCCcceeCCHHHHHHHHHhCCCcE--EcCcCC-EEEEECC-----------CCCceEEEEECC--E
Confidence 13579999999999999999999887763211 111111 1123566 248999999965 9
Q ss_pred EEEEccCceEEEeCCCeEEEE-EEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 346 VWSIHGQNSMVQIGGDALCLG-FVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 346 ~~~i~~~~y~~~~~~~~~C~~-~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+++||+++|+++..++..|++ +..... .+.||||++|||++|+|||++++|||||++
T Consensus 265 ~~~i~~~~~~~~~~~~~~C~~~i~~~~~--~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 265 TATVPGEYISFADVGNGQTFGGIQSNSG--IGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp EEEECHHHHEEEECSTTEEEESEEECTT--TSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEecCHHHeEEecCCCCeEEEEEEcCCC--CCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 999999999988655678986 655432 357999999999999999999999999974
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.9e-51 Score=406.27 Aligned_cols=315 Identities=18% Similarity=0.204 Sum_probs=234.8
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCC-CCccccCCCCcccCccccCCCCCCCCcceeccCCCCceee
Q 014679 41 ATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVS-STNKTARCGSAQCNLANAKACGGGICGAGPDNPISNTGTH 119 (420)
Q Consensus 41 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~S-st~~~~~c~~~~C~~~~~~~c~~~~~~~~~~y~~~~~~~~ 119 (420)
.+.+|+++|.||||+|++.|+|||||+++||+|..|... ..|.+ ..+.++....|.|.+.|+ +++ +.
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~~~y~~----------~~SsT~~~~~~~~~i~Yg-~Gs-~~ 86 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQR----------QLSSTYRDLRKGVYVPYT-QGK-WE 86 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCG----------GGCTTCEEEEEEEEEECS-SCE-EE
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccccCCcCc----------ccCCCceeCCceEEEEEC-CcE-EE
Confidence 367899999999999999999999999999999877311 11111 011222234688999997 655 59
Q ss_pred EEEEEEEEEeee-cCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCC--------ccHHHHhhhcCCCCc
Q 014679 120 GDIRIDVLSIQS-TDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKV--------ALPSQLAAAFSLKRK 189 (420)
Q Consensus 120 G~~~~D~v~i~~-~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~~~~i~~~ 189 (420)
|.+++|+|+|++ .. +.+ .+.|++......... ....+||||||++.+ +++.+|.+++.++++
T Consensus 87 G~~~~Dtv~ig~g~~-------~~~-~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~ 158 (395)
T 2qp8_A 87 GELGTDLVSIPHGPN-------VTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNL 158 (395)
T ss_dssp EEEEEEEEECTTSCS-------CEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSC
T ss_pred EEEEeEEEEECCCCC-------ceE-EEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcce
Confidence 999999999973 31 122 256777664421111 246799999999764 356799999988889
Q ss_pred eEEecCCC------------CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCE
Q 014679 190 FALCLSPF------------DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGK 257 (420)
Q Consensus 190 Fs~~L~~~------------~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~ 257 (420)
||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|+|+++
T Consensus 159 FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~g~ 220 (395)
T 2qp8_A 159 FSLQLCGAGFPLNQSEVLASVGGSMIIGGIDH-----SLYTGSLWYTPIRR-------------EWYYEVIIVRVEINGQ 220 (395)
T ss_dssp EEEEECCCSSCCCHHHHHHSCCEEEEETSCCG-----GGEEEEEEEEECCS-------------BTTBBCCEEEEEETTE
T ss_pred EEEEeccccccccccccccCCCcEEEECCcCc-----ccccCceEEeccCC-------------CceEEEEEEEEEECCE
Confidence 99999741 579999999986 46778999999974 3689999999999999
Q ss_pred EeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccC-C--CCCCCcceeecCCCccccCCCcC
Q 014679 258 AVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVA-P--VAPFGACFRLQDIGFTRIGPVVP 334 (420)
Q Consensus 258 ~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~-~--~~~~~~C~~~~~~~~~~~~~~~P 334 (420)
.+.++...+. ...+||||||++++||+++|++|++++.+... ..+.. . .....+|+..... .+..+|
T Consensus 221 ~~~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~~----~~~~~P 290 (395)
T 2qp8_A 221 DLKMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTT----PWNIFP 290 (395)
T ss_dssp ECCCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTCC----CGGGSC
T ss_pred EcccCccccC-----CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc-cccCCccccccccccccccccc----hHhhCC
Confidence 8876544332 35799999999999999999999999988753 11111 1 1123679876422 123699
Q ss_pred eEEEEEeCCc----eEEEEccCceEEEeCC----CeEEEE--EEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 335 QIDLVLQNKN----VVWSIHGQNSMVQIGG----DALCLG--FVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 335 ~i~f~f~g~~----~~~~i~~~~y~~~~~~----~~~C~~--~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+|+|+|+++. ++++|+|++|+++..+ ...|++ +... .+.||||++|||++|+|||++++|||||++
T Consensus 291 ~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~----~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~ 366 (395)
T 2qp8_A 291 VISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS----STGTVMGAVIMEGFYVVFDRARKRIGFAVS 366 (395)
T ss_dssp CEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE----SSCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC----CCcEEEChHHhCCeeEEEECCCCEEEEEec
Confidence 9999999831 4799999999998643 348963 4432 246999999999999999999999999965
Q ss_pred CCc
Q 014679 405 LLF 407 (420)
Q Consensus 405 ~~~ 407 (420)
.+.
T Consensus 367 ~c~ 369 (395)
T 2qp8_A 367 ACH 369 (395)
T ss_dssp TTC
T ss_pred cCC
Confidence 444
No 30
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.2e-51 Score=415.95 Aligned_cols=304 Identities=16% Similarity=0.225 Sum_probs=239.2
Q ss_pred ceeEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccC------CCCCC
Q 014679 30 KALVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAK------ACGGG 103 (420)
Q Consensus 30 ~~~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~------~c~~~ 103 (420)
....+||.+ ..+.+|+++|.||||||++.|++||||+++||+|..| .+..|..+..+ ++...
T Consensus 125 ~~~~~pL~n-~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C-----------~s~~C~~~~~ydps~SsT~~~~ 192 (451)
T 3qvc_A 125 EFDNVELKD-LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKC-----------TSESCESKNHYDSSKSKTYEKD 192 (451)
T ss_dssp --CCCCGGG-GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTC-----------CSGGGTTSCCBCGGGCTTCEEE
T ss_pred cCCccceee-cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCC-----------CccccCCCCCCCCCCCcccccC
Confidence 345567775 3578999999999999999999999999999999865 33445433322 22245
Q ss_pred CCcceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccc----ccccCCCCCcceEEecCCCCC-----
Q 014679 104 ICGAGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSE----FVLQGLASGVVGIAGLGRSKV----- 174 (420)
Q Consensus 104 ~~~~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~GIlGLg~~~~----- 174 (420)
.|.|.+.|+ +++ +.|.+++|+|+|++. +++ +.|||++. ... ......+||||||++..
T Consensus 193 ~~~f~i~Yg-dGs-~~G~~~~Dtv~igg~---------~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~ 259 (451)
T 3qvc_A 193 DTPVKLTSK-AGT-ISGIFSKDLVTIGKL---------SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSI 259 (451)
T ss_dssp EEEEEEECS-SEE-EEEEEEEEEEEETTE---------EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCC
T ss_pred CCEEEEEEC-CCE-EEEEEEEEEEEECCE---------EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCC
Confidence 689999997 665 999999999999876 788 99999987 422 11245799999998754
Q ss_pred -ccHHHHhhhcCC-CCceEEecCCC--CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEe
Q 014679 175 -ALPSQLAAAFSL-KRKFALCLSPF--DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVT 250 (420)
Q Consensus 175 -s~~~ql~~~~~i-~~~Fs~~L~~~--~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~ 250 (420)
+++.+|.+++.| +++||+||.+. ..|.|+|||+|+ .++.|++.|+|+.. ..+|.|.++
T Consensus 260 ~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~-----s~y~G~l~~~pv~~-------------~~~w~v~l~ 321 (451)
T 3qvc_A 260 DPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEE-----RFFDGPLNYEKLNH-------------DLMWQVDLD 321 (451)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCG-----GGEEEEEEEEECSS-------------TTSSEEEEE
T ss_pred CCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcch-----hhcCCceEEEEccc-------------CCeeEEEEE
Confidence 578999999988 78999999986 479999999997 56789999999974 468999999
Q ss_pred EEEECCEEeecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccC
Q 014679 251 SVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIG 330 (420)
Q Consensus 251 ~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 330 (420)
|.|+++ .. ....+|+||||++++||++++++|.+++.+... . .......+|. .
T Consensus 322 -I~Vgg~-~~-----------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~---~-~~g~y~v~C~-~--------- 374 (451)
T 3qvc_A 322 -VHFGNV-SS-----------KKANVILDSATSVITVPTEFFNQFVESASVFKV---P-FLSLYVTTCG-N--------- 374 (451)
T ss_dssp -EEETTE-EE-----------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC---T-TSSCEEEETT-C---------
T ss_pred -EEECCc-cC-----------CCceEEEeCCCccccCCHHHHHHHHHHcCCeec---C-CCCeEEeeCC-c---------
Confidence 999998 11 135799999999999999999999887754321 1 0111124565 2
Q ss_pred CCcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCC
Q 014679 331 PVVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLL 406 (420)
Q Consensus 331 ~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~ 406 (420)
..+|+|+|+|+| .+++||+++|+++... +..|+ ++.+.... .+.||||++|||++|+|||++++|||||++++
T Consensus 375 ~~~P~itf~fgg--~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~-~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak~ 450 (451)
T 3qvc_A 375 TKLPTLEYRSPN--KVYTLEPKQYLEPLENIFSALCMLNIVPIDLE-KNTFVLGDPFMRKYFTVYDYDNHTVGFALAKN 450 (451)
T ss_dssp TTCCCEEEEETT--EEEEECHHHHEEECTTTSTTEEEECEEECCCS-TTEEEECHHHHHHEEEEEETTTTEEEEEEECC
T ss_pred CcCCcEEEEECC--EEEEEcHHHheeecccCCCCeEEEEEEeCCCC-CCCEEECHHHhhcEEEEEECCCCEEEEEEccc
Confidence 368999999987 9999999999998652 46787 56554421 35799999999999999999999999998754
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.7e-51 Score=397.47 Aligned_cols=293 Identities=16% Similarity=0.139 Sum_probs=226.7
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccccCC-----CCCCCCcceeccCCCC
Q 014679 41 ATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLANAKA-----CGGGICGAGPDNPISN 115 (420)
Q Consensus 41 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~~~~-----c~~~~~~~~~~y~~~~ 115 (420)
.+.+|+++|.|| ||++.|+|||||+++||+|..|. +..|..++.+. .....|.|.+.|+ +|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-----------~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg-~G 78 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-----------ASQQSGHSVYNPSATGKELSGYTWSISYG-DG 78 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-----------HHHHTTSCCBCHHHHCEEEEEEEEEEECT-TS
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-----------chhccCCCCCCcccCCcccCCCeEEEEeC-CC
Confidence 578999999999 89999999999999999998762 11232222111 1124689999998 88
Q ss_pred ceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCCc---------cHHHHhhhcC
Q 014679 116 TGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKVA---------LPSQLAAAFS 185 (420)
Q Consensus 116 ~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql~~~~~ 185 (420)
+.+.|.+++|+|+|++. +++++.|||++....... ....+||||||++..+ +.++|.++ .
T Consensus 79 s~~~G~~~~D~v~ig~~---------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~-i 148 (323)
T 1bxo_A 79 SSASGNVFTDSVTVGGV---------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS-L 148 (323)
T ss_dssp CEEEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG-B
T ss_pred CeEEEEEEEEEEEECCE---------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh-c
Confidence 88999999999999875 788999999987632211 1467999999997543 56778765 3
Q ss_pred CCCceEEecCCCCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEeecCccc
Q 014679 186 LKRKFALCLSPFDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAVPLNKTL 265 (420)
Q Consensus 186 i~~~Fs~~L~~~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 265 (420)
.+++||+||.+...|.|+|||+|+ .++.|++.|+|+... ..+|.|.+++|+|++ ...
T Consensus 149 ~~~~FS~~L~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~~------------~~~w~v~l~~i~v~~-~~~----- 205 (323)
T 1bxo_A 149 AQPLFAVALKHQQPGVYDFGFIDS-----SKYTGSLTYTGVDNS------------QGFWSFNVDSYTAGS-QSG----- 205 (323)
T ss_dssp SSSEEEEECCSSSCEEEEESSCCG-----GGBSSCCEEEECBCT------------TSSCEEEEEEEEETT-EEE-----
T ss_pred CCcEEEEEEeCCCCceEEEeCcCh-----hhccCceEEEECCCC------------CCeEEEEEeeEEECC-ccC-----
Confidence 369999999886689999999986 567899999999743 468999999999999 211
Q ss_pred cccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEEEEeCCce
Q 014679 266 LSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDLVLQNKNV 345 (420)
Q Consensus 266 ~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~ 345 (420)
....+||||||++++||++++++|.+++..+. +....+ ....+|+ ..+|+|+|+|+| .
T Consensus 206 ------~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g-~~~~~C~-----------~~~P~i~f~fgg--~ 263 (323)
T 1bxo_A 206 ------DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAG-GYVFDCS-----------TNLPDFSVSISG--Y 263 (323)
T ss_dssp ------EEEEEEECTTCSSEEECHHHHHHHHTTSTTCE--EETTTT-EEEECTT-----------CCCCCEEEEETT--E
T ss_pred ------CCceEEEeCCCCceeCCHHHHHHHHHhCCCce--EcCcCC-EEEEECC-----------CCCceEEEEECC--E
Confidence 13579999999999999999999888763221 111111 1123576 248999999966 9
Q ss_pred EEEEccCceEEEeCC-CeEEEE-EEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 346 VWSIHGQNSMVQIGG-DALCLG-FVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 346 ~~~i~~~~y~~~~~~-~~~C~~-~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
+++||+++|+++..+ +..|++ +..... .+.||||++|||++|+|||++++|||||++
T Consensus 264 ~~~l~~~~~~~~~~~~~~~C~~~i~~~~~--~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 264 TATVPGSLINYGPSGDGSTCLGGIQSNSG--IGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp EEEECHHHHEEEECSSSSCEEESEEECTT--CSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred EEEECHHHeEEeccCCCCeEEEEEECCCC--CCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 999999999987643 368986 555432 357999999999999999999999999974
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=8.8e-50 Score=399.23 Aligned_cols=317 Identities=18% Similarity=0.201 Sum_probs=234.7
Q ss_pred CceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCC-CCCCccccCCCCcccCccccCCCCCCCCcceeccCCCCceeeE
Q 014679 42 TLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGY-VSSTNKTARCGSAQCNLANAKACGGGICGAGPDNPISNTGTHG 120 (420)
Q Consensus 42 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~-~Sst~~~~~c~~~~C~~~~~~~c~~~~~~~~~~y~~~~~~~~G 120 (420)
..+|+++|.||||||+++|+|||||+++||+|..|. ....|.+. .+.++....|.|.+.|+ +++ +.|
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~~~y~~~----------~SsT~~~~~~~~~i~Yg-~Gs-~~G 94 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQ----------LSSTYRDLRKGVYVPYT-QGK-WEG 94 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGG----------GCTTCEEEEEEEEEECS-SCE-EEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCCcccCCcCcc----------cCcccccCCCEEEEEEC-cEE-EEE
Confidence 468999999999999999999999999999998762 11111110 11222244688999997 554 799
Q ss_pred EEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCC--------ccHHHHhhhcCCCCceE
Q 014679 121 DIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKV--------ALPSQLAAAFSLKRKFA 191 (420)
Q Consensus 121 ~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~~~~i~~~Fs 191 (420)
.+++|+|+|++.. .+.. .+.|+++........ ....+||||||++.. +++.+|.+++.|+++||
T Consensus 95 ~~~~D~v~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS 167 (402)
T 3vf3_A 95 ELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFS 167 (402)
T ss_dssp EEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEE
T ss_pred EEEEEEEEECCcc------ccce-eeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceE
Confidence 9999999998531 0121 245777765422111 246799999998754 46779999999888999
Q ss_pred EecCC------------CCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEe
Q 014679 192 LCLSP------------FDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAV 259 (420)
Q Consensus 192 ~~L~~------------~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~ 259 (420)
+||.+ ...|.|+|||+|+ .++.|++.|+|+.. ..+|.|.+++|.|+++.+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~l~~i~v~g~~~ 229 (402)
T 3vf3_A 168 LQLCGAGFPLNQSEVLASVGGSMIIGGIDH-----SLYTGSLWYTPIRR-------------EWYYEVIIVRVEINGQDL 229 (402)
T ss_dssp EEECCCC-------------EEEEESSCCG-----GGEEEEEEEEECSS-------------BTTBEECEEEEEETTEEC
T ss_pred EEeecccccccccccccCCCCEEEeCCcCc-----ccccCceEEEeCCc-------------CcEEEEEEeEEEECCEEe
Confidence 99963 1479999999986 56788999999974 368999999999999998
Q ss_pred ecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccC-C--CCCCCcceeecCCCccccCCCcCeE
Q 014679 260 PLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVA-P--VAPFGACFRLQDIGFTRIGPVVPQI 336 (420)
Q Consensus 260 ~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~-~--~~~~~~C~~~~~~~~~~~~~~~P~i 336 (420)
.++...+. ...+||||||++++||++++++|.+++.+... ..+.. . .....+|+...... +..+|+|
T Consensus 230 ~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~C~~~~~~~----~~~~P~i 299 (402)
T 3vf3_A 230 KMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTTP----WNIFPVI 299 (402)
T ss_dssp CCCGGGGG-----SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT-TSCCCTTGGGTCSCEEEETTCCC----GGGSCCE
T ss_pred cccccccC-----CCeEEEECCCCcccCCHHHHHHHHHHHhhhcc-ccccCccccccccccccccccch----HhhCCce
Confidence 76543321 35799999999999999999999999998753 11111 1 12256899865321 2369999
Q ss_pred EEEEeCC----ceEEEEccCceEEEeCCC----eEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 337 DLVLQNK----NVVWSIHGQNSMVQIGGD----ALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 337 ~f~f~g~----~~~~~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
+|+|++. .++++|+|++|+++..+. ..|+++..... .+.||||++|||++|+|||++++|||||++.+.
T Consensus 300 ~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 300 SLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE--SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred EEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 9999983 136999999999986542 58986321111 246999999999999999999999999965544
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.1e-49 Score=404.48 Aligned_cols=317 Identities=18% Similarity=0.202 Sum_probs=237.5
Q ss_pred CceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCC-CCCCccccCCCCcccCccccCCCCCCCCcceeccCCCCceeeE
Q 014679 42 TLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGY-VSSTNKTARCGSAQCNLANAKACGGGICGAGPDNPISNTGTHG 120 (420)
Q Consensus 42 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~-~Sst~~~~~c~~~~C~~~~~~~c~~~~~~~~~~y~~~~~~~~G 120 (420)
+.+|+++|.||||||++.|+|||||+++||+|..|. ....|.+. .+.++....|.|.+.|+ +++ +.|
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~cc~~~~~y~~~----------~SsT~~~~~~~~~i~Yg-~Gs-~~G 140 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQ----------LSSTYRDLRKGVYVPYT-QGK-WEG 140 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGG----------GCTTCEEEEEEEEEECS-SCE-EEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccccccCCcccCC----------CCCCcccCCccEEEEeC-CeE-EEE
Confidence 348999999999999999999999999999998751 11111111 11222234688999997 554 699
Q ss_pred EEEEEEEEeeecCCCCCCCceecCcEEEeecccccccCC-CCCcceEEecCCCCC--------ccHHHHhhhcCCCCceE
Q 014679 121 DIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQGL-ASGVVGIAGLGRSKV--------ALPSQLAAAFSLKRKFA 191 (420)
Q Consensus 121 ~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~~~~i~~~Fs 191 (420)
.+++|+|+|++.. .+.+ ++.|+|+........ ....+||||||++.+ +++.+|.+++.|+++||
T Consensus 141 ~~~~Dtv~ig~~~------~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS 213 (455)
T 3lpj_A 141 ELGTDLVSIPHGP------NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFS 213 (455)
T ss_dssp EEEEEEEECTTSC------SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEE
T ss_pred EEEEEEEEECCCc------ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeE
Confidence 9999999998531 1133 356888776532221 246799999998754 46779999999888999
Q ss_pred EecCC------------CCCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEe
Q 014679 192 LCLSP------------FDDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAV 259 (420)
Q Consensus 192 ~~L~~------------~~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~ 259 (420)
+||.+ ...|.|+|||+|. .+|.|++.|+|+.. ..+|.|.+++|.|+++.+
T Consensus 214 ~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~w~v~l~~i~v~g~~~ 275 (455)
T 3lpj_A 214 LQLCGAGFPLNQSEVLASVGGSMIIGGIDH-----SLYTGSLWYTPIRR-------------EWYYEVIIVRVEINGQDL 275 (455)
T ss_dssp EEECCCSSCCCHHHHHHSCCEEEEETSCCG-----GGEEEEEEEEECCS-------------BTTBBCCEEEEEETTEEC
T ss_pred EEeccccccccccccccCCCceEEECCcCc-----ccccCceEEEecCC-------------CceeEEEEeEEEECCEEc
Confidence 99964 1489999999986 56789999999974 468999999999999988
Q ss_pred ecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHHHhCCcccccCC---CCCCCcceeecCCCccccCCCcCeE
Q 014679 260 PLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFASAMPKVARVAP---VAPFGACFRLQDIGFTRIGPVVPQI 336 (420)
Q Consensus 260 ~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~~~~~P~i 336 (420)
.++...+. ...+||||||++++||++++++|.+++.+... ..+... .....+|+...... +..+|+|
T Consensus 276 ~~~~~~~~-----~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~-~~~~~~~~~~g~~~~C~~~~~~~----~~~~P~i 345 (455)
T 3lpj_A 276 KMDCKEYN-----YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS-TEKFPDGFWLGEQLVCWQAGTTP----WNIFPVI 345 (455)
T ss_dssp CCCGGGGG-----SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTT-TSCCCHHHHTTCSCEEESTTCCC----GGGSCCE
T ss_pred cccccccC-----CCeEEEECCCcceeCCHHHHHHHHHHhhhhcc-ccccCcccccCcceecccccCCc----hhcCCcE
Confidence 76543321 36799999999999999999999999998753 111111 12256899765321 2359999
Q ss_pred EEEEeCC----ceEEEEccCceEEEeCCC----eEEEEEEeCCCCCCCceeechhhccccEEEEeCCCCeEEEeecCCc
Q 014679 337 DLVLQNK----NVVWSIHGQNSMVQIGGD----ALCLGFVDGGVNPRTSIVIGARQLENNLLQFDLATSRLGFSDSLLF 407 (420)
Q Consensus 337 ~f~f~g~----~~~~~i~~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~~~~ 407 (420)
+|+|++. .++++|+|++|+++..+. ..|+++..... .+.||||++|||++|+|||++++|||||++.+.
T Consensus 346 ~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~--~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 346 SLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS--STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE--SSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCC--CCcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 9999983 136999999999987542 58986422111 246999999999999999999999999965544
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-39 Score=300.54 Aligned_cols=220 Identities=17% Similarity=0.189 Sum_probs=176.6
Q ss_pred EEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCCc
Q 014679 33 VLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGICG 106 (420)
Q Consensus 33 ~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~~ 106 (420)
.+||++ ..+.+|+++|.||||||++.|+|||||+++||+|..|.. +..|..+. +..+....|.
T Consensus 4 ~~~l~n-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~----------~~~C~~~~~y~~~~SsT~~~~~~~ 72 (239)
T 1b5f_A 4 VVALTN-DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCIN----------SKACRAHSMYESSDSSTYKENGTF 72 (239)
T ss_dssp EEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS----------CHHHHTSCCBCGGGCTTCEEEEEE
T ss_pred eeeeee-cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCC----------CcccCCCCCCCCccCCCeeeCCcE
Confidence 477876 467899999999999999999999999999999987731 12333222 2233345688
Q ss_pred ceeccCCCCceeeEEEEEEEEEeeecCCCCCCCceecCcEEEeeccccccc-CCCCCcceEEecCCCCCc--cHHHHhhh
Q 014679 107 AGPDNPISNTGTHGDIRIDVLSIQSTDGRNPGRAVTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA--LPSQLAAA 183 (420)
Q Consensus 107 ~~~~y~~~~~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s--~~~ql~~~ 183 (420)
|.+.|+ +++ +.|.+++|+|+|++. .++++.|||+...... ......+||||||++..+ +..+|.++
T Consensus 73 ~~i~Yg-~Gs-~~G~~~~D~v~~g~~---------~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~q 141 (239)
T 1b5f_A 73 GAIIYG-TGS-ITGFFSQDSVTIGDL---------VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQ 141 (239)
T ss_dssp EEEECS-SCE-EEEEEEEEEEEETTE---------EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHT
T ss_pred EEEEEC-CCc-EEEEEEEEEEEECCc---------EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHHC
Confidence 999997 654 899999999999875 7889999999875321 223468999999999876 45678888
Q ss_pred cCC-CCceEEecCCC----CCceEEEcCCCCCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEE
Q 014679 184 FSL-KRKFALCLSPF----DDGAIVFGDGPYYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKA 258 (420)
Q Consensus 184 ~~i-~~~Fs~~L~~~----~~G~l~fGg~d~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~ 258 (420)
+.| +++||+||.+. ..|.|+|||+|. .++.|++.|+|+.. ..+|.|.+++|.|+++.
T Consensus 142 g~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~~~~ 203 (239)
T 1b5f_A 142 GLVKERRFSFWLNRNVDEEEGGELVFGGLDP-----NHFRGDHTYVPVTY-------------QYYWQFGIGDVLIGDKS 203 (239)
T ss_dssp TCCSSSEEEEEECCSCSSSCCEEEEETSCCG-----GGEEEEEEEEEEEE-------------ETTEEEEECCEEETTEE
T ss_pred CCCCCCEEEEEEeCCCCCCCCeEEEECCcCh-----hhccCceEEEEccc-------------CCeEEEEeeEEEECCEE
Confidence 888 68999999873 579999999986 56778999999975 35899999999999998
Q ss_pred eecCccccccccCCCCcEEEecCccceeecHHHHHHHHHHHH
Q 014679 259 VPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIYKALVQAFA 300 (420)
Q Consensus 259 ~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~~~l~~~i~ 300 (420)
+.+... ...+||||||++++||++++++|.+++.
T Consensus 204 ~~~~~~--------~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 204 TGFCAP--------GCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp CCTTTT--------CEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred ecccCC--------CCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 764321 3579999999999999999999988875
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3.6e-37 Score=286.71 Aligned_cols=221 Identities=17% Similarity=0.232 Sum_probs=175.3
Q ss_pred eecCcEEEeeccccccc-CCCCCcceEEecCCCCCc------cHHHHhhhcCC-CCceEEecCCC--C--CceEEEcCCC
Q 014679 141 VTVPNFIFLCGSEFVLQ-GLASGVVGIAGLGRSKVA------LPSQLAAAFSL-KRKFALCLSPF--D--DGAIVFGDGP 208 (420)
Q Consensus 141 ~~~~~~~fg~~~~~~~~-~~~~~~~GIlGLg~~~~s------~~~ql~~~~~i-~~~Fs~~L~~~--~--~G~l~fGg~d 208 (420)
++++++.|||++..... ......+||||||++..+ ++.+|.+++.| +++||+||.+. . .|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 47889999999876322 223468999999997654 66899999988 79999999886 2 8999999998
Q ss_pred CCCCCCccCCCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeec
Q 014679 209 YYDLNNFDVSKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLE 288 (420)
Q Consensus 209 ~~~~p~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp 288 (420)
+ .+|.|++.|+|+.. ..+|.|.+++|+|+++.+... ....+|+||||++++||
T Consensus 83 ~-----~~~~g~l~~~p~~~-------------~~~~~v~l~~i~v~~~~~~~~---------~~~~aiiDSGTt~~~lP 135 (241)
T 1lya_B 83 S-----KYYKGSLSYLNVTR-------------KAYWQVHLDQVEVASGLTLCK---------EGCEAIVDTGTSLMVGP 135 (241)
T ss_dssp G-----GGEEEEEEEEECSS-------------BTTBEEEEEEEEETTSCEEST---------TCEEEEECTTCSSEEEC
T ss_pred H-----HHcCCceEEEECcc-------------ccEEEEEEeEEEECCeeEecc---------CCCEEEEECCCccccCC
Confidence 6 56788999999974 468999999999998764211 13579999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccCCCCCCCcceeecCCCccccCCCcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-
Q 014679 289 TSIYKALVQAFASAMPKVARVAPVAPFGACFRLQDIGFTRIGPVVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL- 365 (420)
Q Consensus 289 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~- 365 (420)
++++++|.+++.+... ..+ ....+|+.. ..+|+|+|+|+| ++++||+++|+++... +..|+
T Consensus 136 ~~~~~~l~~~~~~~~~----~~g-~~~~~C~~~---------~~~p~i~f~f~g--~~~~l~~~~y~~~~~~~~~~~C~~ 199 (241)
T 1lya_B 136 VDEVRELQKAIGAVPL----IQG-EYMIPCEKV---------STLPAITLKLGG--KGYKLSPEDYTLKVSQAGKTLCLS 199 (241)
T ss_dssp HHHHHHHHHHHTCEEE----ETT-EEEEEGGGG---------GGSCCEEEEETT--EEEEECTTTSEEEETTTTSSEEEE
T ss_pred HHHHHHHHHHhCCeec----cCC-cEEEECCCC---------ccCCeEEEEECC--EEEEECHHHhEEEccCCCCCeeEE
Confidence 9999999998854321 111 123468754 358999999976 9999999999998753 46898
Q ss_pred EEEeCCC--CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 366 GFVDGGV--NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 366 ~~~~~~~--~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
++..... ...+.||||++|||++|+|||++++|||||++
T Consensus 200 ~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~ 240 (241)
T 1lya_B 200 GFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEA 240 (241)
T ss_dssp SEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred EEEecccCCCCCCeEEechHHhcceEEEEECCCCEEEEEEc
Confidence 4765431 12357999999999999999999999999974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.74 E-value=2.8e-18 Score=135.52 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=68.1
Q ss_pred eEEEEeeCCCCceEEEEEEeCCCCceEEEEEEcCCCceeeeCCCCCCCCCccccCCCCcccCccc------cCCCCCCCC
Q 014679 32 LVLRVAKDTATLQYVTQIKQRTPLVPVKLTVHLGGNILWVDCEKGYVSSTNKTARCGSAQCNLAN------AKACGGGIC 105 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c~~c~~Sst~~~~~c~~~~C~~~~------~~~c~~~~~ 105 (420)
+.+||++ ..+.+|+++|.||||||+|.|+|||||+++||+|..|... ...|..+. +..+....|
T Consensus 3 ~~~~l~n-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~---------~~~C~~~~~y~p~~SsT~~~~~~ 72 (97)
T 1lya_A 3 IPEVLKN-YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLL---------DIACWIHHKYNSDKSSTYVKNGT 72 (97)
T ss_dssp EEEEEEE-ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTT---------CHHHHTSCCBCGGGCTTCEEEEE
T ss_pred ceEeeEE-CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCc---------ccccCCCCCCCchhCCCceeCCC
Confidence 4578875 3678999999999999999999999999999999877321 12333221 223334568
Q ss_pred cceeccCCCCceeeEEEEEEEEEeee
Q 014679 106 GAGPDNPISNTGTHGDIRIDVLSIQS 131 (420)
Q Consensus 106 ~~~~~y~~~~~~~~G~~~~D~v~i~~ 131 (420)
.|.+.|+ +++ +.|.+++|+|+|++
T Consensus 73 ~~~i~Yg-~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 73 SFDIHYG-SGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEECS-SCE-EEEEEEEEEEEESC
T ss_pred cEEEEEC-CcE-EEEEEEEEEEEECC
Confidence 9999998 665 89999999999976
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.64 E-value=2.7e-16 Score=121.80 Aligned_cols=71 Identities=14% Similarity=0.370 Sum_probs=59.4
Q ss_pred CcCeEEEEEeCCceEEEEccCceEEEeCC--CeEEE-EEEeCCC-CCCCceeechhhccccEEEEeCCCCeEEEeec
Q 014679 332 VVPQIDLVLQNKNVVWSIHGQNSMVQIGG--DALCL-GFVDGGV-NPRTSIVIGARQLENNLLQFDLATSRLGFSDS 404 (420)
Q Consensus 332 ~~P~i~f~f~g~~~~~~i~~~~y~~~~~~--~~~C~-~~~~~~~-~~~~~~ILG~~flr~~y~vfD~e~~rIGfa~~ 404 (420)
.+|+|+|+|+| .+++|+|++|+++... +..|+ ++..... ...+.||||++|||++|+|||++++|||||++
T Consensus 12 ~~P~i~f~~gg--~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~ 86 (87)
T 1b5f_B 12 SMPNVSFTIGG--KKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEA 86 (87)
T ss_dssp GCCCEEEEETT--EEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEECC--EEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEc
Confidence 58999999987 9999999999998653 36898 5665421 12468999999999999999999999999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.87 E-value=0.28 Score=40.59 Aligned_cols=25 Identities=28% Similarity=0.433 Sum_probs=24.0
Q ss_pred eeechhhccccEEEEeCCCCeEEEe
Q 014679 378 IVIGARQLENNLLQFDLATSRLGFS 402 (420)
Q Consensus 378 ~ILG~~flr~~y~vfD~e~~rIGfa 402 (420)
.|||..||+++-++.|+++++|-|.
T Consensus 110 ~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 110 VLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEECHHHHHHTTCEEETTTTEEEET
T ss_pred eEecHHHHhhCCEEEECCCCEEEEc
Confidence 7999999999999999999999996
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.12 Score=42.80 Aligned_cols=30 Identities=20% Similarity=0.202 Sum_probs=26.6
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 41 ATLQYVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 41 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
..+.+++++.|+. +++.+++|||++.+-+.
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is 52 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMS 52 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccC
Confidence 4568999999998 89999999999998875
No 40
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.47 E-value=0.62 Score=38.67 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=24.6
Q ss_pred ceeechhhccccEEEEeCCCCeEEEee
Q 014679 377 SIVIGARQLENNLLQFDLATSRLGFSD 403 (420)
Q Consensus 377 ~~ILG~~flr~~y~vfD~e~~rIGfa~ 403 (420)
..|||..||+++-.+.|++++++-|..
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 369999999999999999999999863
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.45 E-value=1.1 Score=34.70 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=23.8
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 44 QYVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 44 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
.-++.|+||. |.+++++|||++++-+.
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEc
Confidence 3467899998 99999999999999886
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=82.11 E-value=1.2 Score=34.15 Aligned_cols=26 Identities=12% Similarity=0.056 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 45 YVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 45 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
=+++++||. |.+++++|||.+++-+.
T Consensus 9 P~vtvkI~G--q~~eaLLDTGAD~TVl~ 34 (99)
T 2hs1_A 9 PLVTIKIGG--QLKEALLDTGADDTIIE 34 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSEEES
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEe
Confidence 357799999 99999999999999985
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=77.49 E-value=2 Score=32.90 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 45 YVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 45 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
=+++++||. |.+++++|||.+++-+.
T Consensus 9 P~vti~I~G--q~~e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 9 PVVTAYIEG--QPVEVLLDTGADDSIVA 34 (99)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEES
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEc
Confidence 367799999 99999999999999985
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=75.65 E-value=2.2 Score=33.36 Aligned_cols=29 Identities=7% Similarity=0.100 Sum_probs=24.4
Q ss_pred EEEEEEeC---CCCceEEEEEEcCCCceeeeC
Q 014679 45 YVTQIKQR---TPLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 45 Y~~~i~iG---tP~q~~~v~~DTGSs~~Wv~c 73 (420)
=.++|+|| +|+|.+..++|||.+++-+.-
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 45667777 788999999999999999863
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.69 E-value=2.9 Score=34.53 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=26.2
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 41 ATLQYVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 41 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
....|++++.|.. +++++++|||++.+.+.
T Consensus 21 ~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is 50 (148)
T 3s8i_A 21 QVTMLYINCKVNG--HPLKAFVDSGAQMTIMS 50 (148)
T ss_dssp -CCCCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred ccCEEEEEEEECC--EEEEEEEeCCCCcEeeC
Confidence 3467899999988 99999999999999885
No 46
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.10 E-value=3.3 Score=32.70 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=22.5
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 44 QYVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 44 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
.=++ |+||. |.++.++|||.+++-+.
T Consensus 14 rP~v-ikI~G--q~~eaLLDTGAD~TVi~ 39 (116)
T 2hah_A 14 PEIL-IFVNG--YPIKFLLDTGADITVLN 39 (116)
T ss_dssp CEEE-EEETT--EEEEEEECTTCSSCEEE
T ss_pred CCEE-EEECC--EEEEEEecCCCCcEEEc
Confidence 3455 99998 99999999999999885
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=67.76 E-value=4.5 Score=31.72 Aligned_cols=27 Identities=4% Similarity=0.000 Sum_probs=23.8
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 44 QYVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 44 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
.=.++++||. |.++.++|||.+++-+.
T Consensus 9 RP~vti~I~G--q~~eaLLDTGADdTVi~ 35 (114)
T 3sqf_A 9 KPSLTLWLDD--KMFTGLINTGADVTIIK 35 (114)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred CCeEEEEECC--EEEEEEEccCCCceEEe
Confidence 3467799999 99999999999999985
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=56.76 E-value=9 Score=30.87 Aligned_cols=30 Identities=17% Similarity=0.106 Sum_probs=25.7
Q ss_pred CceEEEEEEeCCCCceEEEEEEcCCCceeeeC
Q 014679 42 TLQYVTQIKQRTPLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 42 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~c 73 (420)
...-++.++|+. |++.+++|||.+++-+.-
T Consensus 20 ~~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 20 PPEPRITLKVGG--QPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp CCSSEEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cCCCEEEEEECC--EEEEEEEeCCCCeEEEcc
Confidence 345678899999 999999999999999863
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=51.51 E-value=11 Score=32.67 Aligned_cols=26 Identities=8% Similarity=0.040 Sum_probs=23.5
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 45 YVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 45 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
-.++++||. |.++.++|||.+++-+.
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEe
Confidence 467899999 99999999999999985
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=48.42 E-value=12 Score=29.72 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=18.2
Q ss_pred eCCCCceEEEEEEcCCCceeeeC
Q 014679 51 QRTPLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 51 iGtP~q~~~v~~DTGSs~~Wv~c 73 (420)
||. |.++.++|||.+++-+.-
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISE 47 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEET
T ss_pred CCC--EEEEEEecCCCCcEEEec
Confidence 666 888999999999999864
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=46.45 E-value=27 Score=32.41 Aligned_cols=44 Identities=9% Similarity=-0.011 Sum_probs=31.9
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCC---CCceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRT---PLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGt---P~q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+.. ....|.++ |.||. +.+...+++|||++++++|.
T Consensus 180 ~g~l~~~p~~~--~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~ 229 (329)
T 3c9x_A 180 KGPVAYTPVDN--SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDD 229 (329)
T ss_dssp SSCEEEEECBC--TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECH
T ss_pred ccceEEEEccC--CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCH
Confidence 34456778864 23567666 67886 24678999999999999984
No 52
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=45.11 E-value=23 Score=26.59 Aligned_cols=16 Identities=6% Similarity=-0.103 Sum_probs=13.9
Q ss_pred cEEEecCccceeecHH
Q 014679 275 GTKISTVNPYTVLETS 290 (420)
Q Consensus 275 ~~ivDSGTt~~~lp~~ 290 (420)
.++||||++.+.+|..
T Consensus 29 ~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 29 TVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCCCceEEeEc
Confidence 3789999999999964
No 53
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=42.70 E-value=28 Score=30.69 Aligned_cols=40 Identities=8% Similarity=-0.063 Sum_probs=28.6
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCCC-----CceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRTP-----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.+ ...|.++ |.||.- .....++||||++++++|.
T Consensus 179 l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 179 HTYVPVTY---QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEEEE---ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred eEEEEccc---CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 34567765 2467665 778762 3467899999999999974
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=41.06 E-value=32 Score=31.80 Aligned_cols=44 Identities=5% Similarity=-0.084 Sum_probs=31.5
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCCC---CceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRTP---LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+... ...|.++ |.||.- .+...+++|||++++++|-
T Consensus 175 ~g~l~~~p~~~~--~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 224 (325)
T 1ibq_A 175 TGSITYTDADSS--QGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDD 224 (325)
T ss_dssp SSCCEEEECBCT--TSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECH
T ss_pred cCceEEEEcCCC--CceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCH
Confidence 344567788642 3456665 678862 3578999999999999984
No 55
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=40.22 E-value=28 Score=32.19 Aligned_cols=45 Identities=7% Similarity=0.019 Sum_probs=31.4
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCCC--CceEEEEEEcCCCceeeeCC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRTP--LVPVKLTVHLGGNILWVDCE 74 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGtP--~q~~~v~~DTGSs~~Wv~c~ 74 (420)
......+|+... ...|.++ |.||.+ .....++||||++++++|-.
T Consensus 180 ~g~l~~~p~~~~--~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 180 KGSLTTVPIDNS--RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp CSCCEEEECBCT--TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred cCceEEEEccCC--CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 344567788642 3456554 678862 35678999999999999843
No 56
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=39.42 E-value=33 Score=30.04 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=27.2
Q ss_pred eEEEEeeCCCCceEEE---EEEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 32 LVLRVAKDTATLQYVT---QIKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
..+|+.+ ...|.+ .|.||.- .....+++|||++.+++|.
T Consensus 91 ~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~ 136 (241)
T 1lya_B 91 SYLNVTR---KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPV 136 (241)
T ss_dssp EEEECSS---BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECH
T ss_pred EEEECcc---ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCH
Confidence 4455553 345655 4778762 3567899999999999984
No 57
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=38.51 E-value=32 Score=31.86 Aligned_cols=44 Identities=7% Similarity=0.009 Sum_probs=31.1
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCCC---CceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRTP---LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+... ...|.++ |.||.- .....+++|||++++++|-
T Consensus 179 ~g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1oew_A 179 TGSITYTAVSTK--QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPA 228 (329)
T ss_dssp SSCCEEEECBCT--TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECH
T ss_pred ccceEEEEccCC--CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCH
Confidence 344567788642 3456555 778863 3467899999999999974
No 58
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.28 E-value=31 Score=31.85 Aligned_cols=44 Identities=9% Similarity=-0.055 Sum_probs=30.8
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCC-CCceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRT-PLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGt-P~q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+... ...|.++ |.||. +.....+++|||++++++|-
T Consensus 176 ~g~l~~~p~~~~--~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~ 223 (323)
T 1bxo_A 176 TGSLTYTGVDNS--QGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDD 223 (323)
T ss_dssp SSCCEEEECBCT--TSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECH
T ss_pred cCceEEEECCCC--CCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCH
Confidence 344567788642 3456655 66775 34567899999999999984
No 59
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=34.79 E-value=31 Score=31.90 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=28.7
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCC--CCceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRT--PLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGt--P~q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.. ....|.++ |.||. +.+...+++|||++++++|.
T Consensus 179 l~~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~ 224 (323)
T 1izd_A 179 ITYTDVDN--SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDD 224 (323)
T ss_dssp EEEEECBC--TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECH
T ss_pred eEEEECCC--CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCH
Confidence 45567753 23456665 56776 24567899999999999984
No 60
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=33.66 E-value=21 Score=33.92 Aligned_cols=45 Identities=4% Similarity=-0.093 Sum_probs=29.6
Q ss_pred CceeEEEEeeCCCCceEEE---EEEeCC-----CCceE---EEEEEcCCCceeeeC
Q 014679 29 PKALVLRVAKDTATLQYVT---QIKQRT-----PLVPV---KLTVHLGGNILWVDC 73 (420)
Q Consensus 29 ~~~~~~p~~~~~~~~~Y~~---~i~iGt-----P~q~~---~v~~DTGSs~~Wv~c 73 (420)
....-+|+........|++ .|.||. |+..+ .+++|||++++.+|.
T Consensus 190 g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~ 245 (381)
T 1t6e_X 190 QSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRP 245 (381)
T ss_dssp TTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECH
T ss_pred CcceeeccccCCCCcceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCH
Confidence 3456788876433345655 367886 22223 389999999999874
No 61
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=31.39 E-value=66 Score=29.71 Aligned_cols=43 Identities=14% Similarity=0.191 Sum_probs=29.0
Q ss_pred CCceeEEEEeeCCCCceEEE---EEEeCCCC---ceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVT---QIKQRTPL---VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~---~i~iGtP~---q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+.... .|.+ .|.||.-. ....+++|||++.+++|-
T Consensus 180 ~g~l~~~p~~~~~---~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~ 228 (342)
T 3pvk_A 180 SGSLIALPVTSDR---ELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQ 228 (342)
T ss_dssp SSCCEEEECCCSS---SCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECH
T ss_pred eeeeEEeecCccc---eEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCH
Confidence 3445677776642 5554 47787621 226799999999999984
No 62
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.85 E-value=37 Score=29.35 Aligned_cols=26 Identities=8% Similarity=0.040 Sum_probs=23.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeee
Q 014679 45 YVTQIKQRTPLVPVKLTVHLGGNILWVD 72 (420)
Q Consensus 45 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~ 72 (420)
=.++++||. |.++.++|||.+++-+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIE 138 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CcEEEEECC--EEEeeeecccCCceeee
Confidence 467899999 99999999999999984
No 63
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.90 E-value=53 Score=31.38 Aligned_cols=43 Identities=5% Similarity=-0.003 Sum_probs=28.5
Q ss_pred ceeEEEEeeCCCCceEEEE---EEeCC------CCceE--------EEEEEcCCCceeeeC
Q 014679 30 KALVLRVAKDTATLQYVTQ---IKQRT------PLVPV--------KLTVHLGGNILWVDC 73 (420)
Q Consensus 30 ~~~~~p~~~~~~~~~Y~~~---i~iGt------P~q~~--------~v~~DTGSs~~Wv~c 73 (420)
....+|+..+. ...|.++ |.||. |+..+ .++||||++++.+|-
T Consensus 216 ~l~~~Pl~~~~-~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~ 275 (403)
T 3aup_A 216 DLAFTPLTITL-QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQ 275 (403)
T ss_dssp TEEEEECEECT-TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECH
T ss_pred ceeecccccCC-CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCH
Confidence 55778888753 3577665 67886 11112 289999999999874
No 64
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=28.88 E-value=63 Score=30.22 Aligned_cols=44 Identities=18% Similarity=0.144 Sum_probs=29.9
Q ss_pred CCCceeeeCcccCCCCCCCcCCCCCcceEeEEeEEEEC--CEEeecCccccccccCCCCcEEEecCccceeecHH
Q 014679 218 SKNLKYTPLFINKVNTASGFLGEPSVEYFIGVTSVHVN--GKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETS 290 (420)
Q Consensus 218 ~g~~~~~p~~~~~~~~~~~~~~~~~~~y~v~l~~i~vg--~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~ 290 (420)
+|.+...|+.... ...|.+ .|.|| .+.+ .++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~-----------~~~Y~~---~i~iGtP~q~~---------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFD-----------LEEYAI---PVSIGTPGQDF---------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETT-----------TTEEEE---EEEETTTTEEE---------------EEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCC-----------CCEEEE---EEEECCCCcEE---------------EEEEcCCCCCeEECCC
Confidence 3667778886532 356655 56777 3433 3789999999999964
No 65
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=27.97 E-value=58 Score=30.38 Aligned_cols=42 Identities=12% Similarity=0.025 Sum_probs=29.8
Q ss_pred CceeEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 29 PKALVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 29 ~~~~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
.....+|+... ..|.++ |.||.- .....+++|||++++++|.
T Consensus 190 g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~ 238 (351)
T 1tzs_A 190 GSLNWVPVTKQ---AYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPS 238 (351)
T ss_dssp SCCEEEECSEE---TTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECH
T ss_pred CceEEEecCCC---ceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCH
Confidence 34566777653 456554 778862 3557899999999999974
No 66
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=27.71 E-value=72 Score=29.30 Aligned_cols=16 Identities=6% Similarity=-0.159 Sum_probs=14.0
Q ss_pred cEEEecCccceeecHH
Q 014679 275 GTKISTVNPYTVLETS 290 (420)
Q Consensus 275 ~~ivDSGTt~~~lp~~ 290 (420)
.++||||++.+++|..
T Consensus 30 ~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 30 TVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEETTCCCEEEEBT
T ss_pred EEEEeCCccceEEcCC
Confidence 4789999999999864
No 67
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=27.45 E-value=88 Score=28.83 Aligned_cols=43 Identities=7% Similarity=0.069 Sum_probs=29.3
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCCCC--ceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRTPL--VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGtP~--q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+..+ ..|.++ |.||.-. ....+++|||++.+++|-
T Consensus 183 ~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~iiDSGtt~~~lP~ 230 (339)
T 3fv3_A 183 SGKLVAEQVTSS---QALTISLASVNLKGSSFSFGDGALLDSGTTLTYFPS 230 (339)
T ss_dssp SSCCEEEEBCCS---SSCEEEEEEEEESSCEEEEEEEEEECTTBSSEEECH
T ss_pred ecceEEEecccC---ccEEEEEEEEEECCEeecCCccEEEeCCCCCEecCH
Confidence 344567787763 355554 7787632 234699999999999974
No 68
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=26.86 E-value=82 Score=28.89 Aligned_cols=42 Identities=10% Similarity=0.017 Sum_probs=30.0
Q ss_pred CceeEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeCC
Q 014679 29 PKALVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDCE 74 (420)
Q Consensus 29 ~~~~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c~ 74 (420)
.....+|+... ..|.++ |.||.- .+ ..+++|||++.+++|-.
T Consensus 177 g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~-~~aiiDSGTt~~~lp~~ 225 (324)
T 1am5_A 177 GSIHWIPVTAE---KYWQVALDGITVNGQTAACEG-CQAIVDTGTSKIVAPVS 225 (324)
T ss_dssp SCCEEEEEEEE---TTEEEEECEEEETTEECCCCC-EEEEECTTCSSEEECTT
T ss_pred CceEEEecCCC---cEEEEEEeEEEECCceeeccC-ceEEEecCCccEECCHH
Confidence 44567787753 466654 678762 22 78999999999999854
No 69
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=25.91 E-value=67 Score=31.66 Aligned_cols=40 Identities=8% Similarity=-0.097 Sum_probs=28.5
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCC-----CCceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRT-----PLVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.. .+.|.++ |.||. +.....+++|||++++++|-
T Consensus 222 l~~~pv~~---~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~ 269 (478)
T 1qdm_A 222 HTYVPVTQ---KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPT 269 (478)
T ss_dssp EEEEEEEE---ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECH
T ss_pred ceEEeccC---CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCH
Confidence 34567765 2466665 67775 33567899999999999974
No 70
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=25.55 E-value=64 Score=30.70 Aligned_cols=40 Identities=13% Similarity=0.003 Sum_probs=28.4
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
..-+|+.+ ...|.++ |.||.- .....+++|||++++++|.
T Consensus 233 l~~~pv~~---~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~ 279 (383)
T 2x0b_A 233 FHYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGST 279 (383)
T ss_dssp EEEEEBSS---TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECH
T ss_pred eEEEEcCC---CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCH
Confidence 34566654 3466554 778863 3567899999999999984
No 71
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=25.33 E-value=69 Score=29.49 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=28.6
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCCC-----CceEEEEEEcCCCceeeeCC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRTP-----LVPVKLTVHLGGNILWVDCE 74 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~c~ 74 (420)
...+|+.+ ...|.++ |.||.- .....+++|||++.+++|-.
T Consensus 180 l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 180 IYWAPVTQ---ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp EEEEEBCS---SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred eEEEECCC---CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 34556654 3456554 678762 35678999999999999854
No 72
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.20 E-value=78 Score=29.28 Aligned_cols=43 Identities=9% Similarity=0.140 Sum_probs=28.6
Q ss_pred CCceeEEEEeeCCCCceEEE---EEEeCCCC--ceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVT---QIKQRTPL--VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~---~i~iGtP~--q~~~v~~DTGSs~~Wv~c 73 (420)
......+|+.++ ..|.+ .|.||.-. ....++||||++.+++|-
T Consensus 181 ~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 181 SGSLVDLPITSE---KKLTVGLRSVNVRGRNVDANTNVLLDSGTTISYFTR 228 (342)
T ss_dssp SSCCEEEECCCS---SSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECH
T ss_pred ecceEEEeccCC---ceEEEEEeEEEECCEecCCCcCEEEeCCCCCEEcCH
Confidence 344566777653 24544 47888621 234689999999999974
No 73
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=24.88 E-value=75 Score=29.95 Aligned_cols=43 Identities=12% Similarity=-0.033 Sum_probs=30.2
Q ss_pred CCceeEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 28 RPKALVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 28 ~~~~~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
.....-+|+.+. ..|.++ |.||.- .+...+++|||++++++|.
T Consensus 220 ~g~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~ 269 (370)
T 3psg_A 220 TGSLNWVPVSVE---GYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPT 269 (370)
T ss_dssp SSCCEEEECSEE---TTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEH
T ss_pred CCcceeeccccc---ceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCH
Confidence 344566777763 456554 678762 3567899999999999984
No 74
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=24.11 E-value=63 Score=24.62 Aligned_cols=34 Identities=24% Similarity=0.144 Sum_probs=26.1
Q ss_pred ceEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeecHHHH
Q 014679 244 EYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLETSIY 292 (420)
Q Consensus 244 ~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~~~~ 292 (420)
.|+=.+-.++|+|+.. .+++|||.--+.+..+..
T Consensus 5 l~~RP~v~v~I~Gq~~---------------e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 5 LEKRPTTIVLINDTPL---------------NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSSCCEEEEEETTEEE---------------EEEECTTCSSCEEEHHHH
T ss_pred ccCCCEEEEEECCEEE---------------EEEeccCCCcEEEccccC
Confidence 4555566789999854 378999999999997654
No 75
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=23.28 E-value=62 Score=24.47 Aligned_cols=31 Identities=13% Similarity=0.199 Sum_probs=24.0
Q ss_pred ceEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeecH
Q 014679 244 EYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLET 289 (420)
Q Consensus 244 ~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~ 289 (420)
.|+=.+..++|+|+.+. +++|||.--+.+.+
T Consensus 5 l~~rP~vtvkI~Gq~~e---------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 5 LWKRPLVTIKIGGQLKE---------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSSCCEEEEEETTEEEE---------------EEECTTCSSEEESC
T ss_pred ccCCCEEEEEECCEEEE---------------EEeccCCCcEEEec
Confidence 45556677899998653 68999999998875
No 76
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=23.08 E-value=76 Score=29.90 Aligned_cols=42 Identities=12% Similarity=0.094 Sum_probs=27.8
Q ss_pred CceeEEEEeeCCCCceEE---EEEEeCCC-----Cc---eEEEEEEcCCCceeeeC
Q 014679 29 PKALVLRVAKDTATLQYV---TQIKQRTP-----LV---PVKLTVHLGGNILWVDC 73 (420)
Q Consensus 29 ~~~~~~p~~~~~~~~~Y~---~~i~iGtP-----~q---~~~v~~DTGSs~~Wv~c 73 (420)
.....+|+.+. ..|. ..|.||.- .. ...++||||++++++|-
T Consensus 184 g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 236 (383)
T 2ewy_A 184 GDIWYTPIKEE---WYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQ 236 (383)
T ss_dssp SCEEEEECSSB---TTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEH
T ss_pred CccEEEecCCC---ceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCH
Confidence 34566777653 3443 35778752 11 34799999999999984
No 77
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=22.51 E-value=58 Score=26.06 Aligned_cols=30 Identities=20% Similarity=0.118 Sum_probs=22.4
Q ss_pred eEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeecH
Q 014679 245 YFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLET 289 (420)
Q Consensus 245 y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~ 289 (420)
+.=.+..++|+|+.+. +++|||...+.|+.
T Consensus 20 ~~RP~v~i~I~G~~~~---------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 20 PPEPRITLKVGGQPVT---------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp CCSSEEEEEETTEEEE---------------EEECTTCSSCEECS
T ss_pred cCCCEEEEEECCEEEE---------------EEEeCCCCeEEEcc
Confidence 3334455888987653 68999999999986
No 78
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=22.47 E-value=69 Score=30.81 Aligned_cols=43 Identities=7% Similarity=0.023 Sum_probs=29.4
Q ss_pred eeEEEEeeCCCC-----------ceEEEE---EEeCCCC-------------ceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTAT-----------LQYVTQ---IKQRTPL-------------VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~-----------~~Y~~~---i~iGtP~-------------q~~~v~~DTGSs~~Wv~c 73 (420)
...+||..+... ..|+++ |.||.-. ..-.+++|||.+++.+|-
T Consensus 212 l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~ 281 (413)
T 3vla_A 212 LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLET 281 (413)
T ss_dssp SEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEH
T ss_pred eeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCH
Confidence 667888875321 467664 7888621 113589999999999974
No 79
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=21.84 E-value=81 Score=28.97 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=26.9
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCCC---CceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRTP---LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.+ ...|.++ |.||.- .....+++|||++.+++|-
T Consensus 183 l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~ 228 (329)
T 1dpj_A 183 ITWLPVRR---KAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPS 228 (329)
T ss_dssp EEEEECSS---BTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECH
T ss_pred eEEEEcCC---CceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCH
Confidence 34566654 3456554 678862 2346799999999999974
No 80
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=21.06 E-value=57 Score=30.15 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=27.4
Q ss_pred eEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 32 LVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 32 ~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
..+|+.. ...|.++ |.||.. +....+++|||++.+++|.
T Consensus 191 ~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~ 236 (341)
T 3k1w_A 191 HYINLIK---TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGST 236 (341)
T ss_dssp EEEECSS---TTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECH
T ss_pred EEEecCC---CCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCH
Confidence 4556553 3456554 678763 3457899999999999984
No 81
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=20.68 E-value=84 Score=28.69 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=27.6
Q ss_pred eeEEEEeeCCCCceEEEE---EEeCCC----CceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVTQ---IKQRTP----LVPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~~---i~iGtP----~q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.. ...|.++ |.||.- +....+++|||++.+++|-
T Consensus 177 l~~~p~~~---~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~ 223 (320)
T 4aa9_A 177 LHWVPVTL---QQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPS 223 (320)
T ss_dssp EEEEECSS---BTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEH
T ss_pred eEEEEccc---CCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCH
Confidence 34566654 3456554 677762 2567899999999999984
No 82
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=20.50 E-value=80 Score=29.11 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=26.1
Q ss_pred eeEEEEeeCCCCceEEE---EEEeCCCC--ceEEEEEEcCCCceeeeC
Q 014679 31 ALVLRVAKDTATLQYVT---QIKQRTPL--VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 31 ~~~~p~~~~~~~~~Y~~---~i~iGtP~--q~~~v~~DTGSs~~Wv~c 73 (420)
...+|+.++ ..|.+ .|.||.-. ....+++|||++.+++|-
T Consensus 184 l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~~~~iiDSGTt~~~lP~ 228 (334)
T 1j71_A 184 LTALPVTSS---VELRVHLGSINFDGTSVSTNADVVLDSGTTITYFSQ 228 (334)
T ss_dssp EEEEECCCS---SSCEEEEEEEEETTEEEEEEEEEEECTTCSSEEECH
T ss_pred eEEEEccCC---CeEEEEEeEEEECCEeccCCccEEEeCCCCcEecCH
Confidence 345566543 24544 47788621 234689999999999984
No 83
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=20.48 E-value=80 Score=24.60 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=24.8
Q ss_pred cceEeEEeEEEECCEEeecCccccccccCCCCcEEEecCccceeecH
Q 014679 243 VEYFIGVTSVHVNGKAVPLNKTLLSIDNEGVGGTKISTVNPYTVLET 289 (420)
Q Consensus 243 ~~y~v~l~~i~vg~~~~~~~~~~~~~~~~g~~~~ivDSGTt~~~lp~ 289 (420)
..|+=.+. ++|+|+.+. +++|||.-.+.+.+
T Consensus 10 ~l~~rP~v-ikI~Gq~~e---------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK---------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE---------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE---------------EEecCCCCcEEEcc
Confidence 35766777 999998653 68999999998885
No 84
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=20.02 E-value=86 Score=28.95 Aligned_cols=45 Identities=7% Similarity=0.057 Sum_probs=29.4
Q ss_pred CceeEEEEeeCCC-CceEEE--EEEeCC-CC--ceEEEEEEcCCCceeeeC
Q 014679 29 PKALVLRVAKDTA-TLQYVT--QIKQRT-PL--VPVKLTVHLGGNILWVDC 73 (420)
Q Consensus 29 ~~~~~~p~~~~~~-~~~Y~~--~i~iGt-P~--q~~~v~~DTGSs~~Wv~c 73 (420)
.....+|+..... ...|.+ .|.||. -. ....++||||++++++|-
T Consensus 172 g~l~~~p~~~~~~~~~~w~v~~~i~v~~~~~l~~~~~aiiDSGTt~~~lP~ 222 (340)
T 1wkr_A 172 GSITYTPITSTSPASAYWGINQSIRYGSSTSILSSTAGIVDTGTTLTLIAS 222 (340)
T ss_dssp SCCEEEECCSSTTGGGSSEEEEEEEETTTEEEEEEEEEEECTTBCSEEECH
T ss_pred cceEEEECccCCCCcceEEEEeeEEECCCeEccCCCeEEEeCCcccccCCH
Confidence 4456788876422 344444 477876 10 234799999999999974
Done!