Query 014684
Match_columns 420
No_of_seqs 388 out of 3198
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:59:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 99.9 3.3E-24 1.1E-28 216.0 20.8 204 1-221 182-386 (407)
2 4hb9_A Similarities with proba 99.9 2.1E-23 7.1E-28 208.8 13.2 190 2-197 168-383 (412)
3 2vou_A 2,6-dihydroxypyridine h 99.9 2.7E-22 9.4E-27 201.5 18.1 182 2-198 155-368 (397)
4 2xdo_A TETX2 protein; tetracyc 99.9 5.5E-21 1.9E-25 192.1 19.0 183 1-195 183-382 (398)
5 3c96_A Flavin-containing monoo 99.8 2.5E-20 8.6E-25 188.0 20.0 177 2-192 171-366 (410)
6 3c4a_A Probable tryptophan hyd 99.8 1E-20 3.5E-25 189.1 12.4 205 13-248 158-369 (381)
7 4h87_A Kanadaptin; FHA domain 99.8 1.3E-20 4.6E-25 160.0 10.3 101 283-398 18-129 (130)
8 3alj_A 2-methyl-3-hydroxypyrid 99.8 2.4E-21 8.2E-26 193.3 5.1 174 2-192 162-344 (379)
9 3va4_A Mediator of DNA damage 99.8 6.3E-20 2.2E-24 156.2 11.6 93 297-404 36-130 (132)
10 2x3n_A Probable FAD-dependent 99.8 1.4E-20 4.7E-25 188.9 8.0 187 2-199 168-360 (399)
11 3gqs_A Adenylate cyclase-like 99.8 2.6E-19 8.9E-24 146.9 11.8 100 283-400 2-102 (106)
12 2pie_A E3 ubiquitin-protein li 99.8 2.8E-19 9.5E-24 153.7 12.3 105 280-400 4-117 (138)
13 1uht_A Expressed protein; FHA 99.8 4.3E-19 1.5E-23 148.5 12.0 100 284-397 11-111 (118)
14 2xt9_B Putative signal transdu 99.8 8.8E-19 3E-23 145.9 11.8 97 281-399 7-104 (115)
15 3po8_A RV0020C protein, putati 99.8 8.8E-19 3E-23 142.2 11.1 83 298-400 15-97 (100)
16 3els_A PRE-mRNA leakage protei 99.8 1.8E-19 6E-24 157.9 7.4 115 269-391 4-146 (158)
17 2kb3_A Oxoglutarate dehydrogen 99.8 7.5E-19 2.6E-23 151.6 10.9 99 280-399 41-139 (143)
18 2jqj_A DNA damage response pro 99.8 1.1E-18 3.6E-23 152.4 11.4 97 285-400 17-122 (151)
19 1gxc_A CHK2, CDS1, serine/thre 99.8 2.7E-18 9.1E-23 149.5 12.1 103 280-400 24-141 (149)
20 2csw_A Ubiquitin ligase protei 99.8 5.3E-19 1.8E-23 153.2 7.3 104 280-399 12-124 (145)
21 1lgp_A Cell cycle checkpoint p 99.8 1.7E-18 5.9E-23 144.4 9.8 100 285-400 3-111 (116)
22 2qa2_A CABE, polyketide oxygen 99.8 2E-18 6.9E-23 178.9 12.3 153 36-199 199-351 (499)
23 2jpe_A Nuclear inhibitor of pr 99.8 1.9E-19 6.6E-24 155.1 3.5 93 284-390 33-128 (140)
24 2qa1_A PGAE, polyketide oxygen 99.8 3.2E-18 1.1E-22 177.4 13.3 152 36-199 198-350 (500)
25 1r21_A Antigen KI-67; beta san 99.8 1.7E-18 5.9E-23 146.9 8.9 86 297-401 24-109 (128)
26 3elv_A PRE-mRNA leakage protei 99.7 2E-18 6.7E-23 155.8 9.3 118 266-391 48-193 (205)
27 1mzk_A Kinase associated prote 99.7 8.5E-18 2.9E-22 144.6 12.6 95 285-391 7-113 (139)
28 2kfu_A RV1827 PThr 22; FHA dom 99.7 6E-18 2E-22 148.6 11.8 96 283-400 53-149 (162)
29 1dmz_A Protein (protein kinase 99.7 5E-18 1.7E-22 149.1 9.9 99 287-400 7-125 (158)
30 3oun_A Putative uncharacterize 99.7 4.8E-18 1.7E-22 147.9 8.8 80 298-397 77-156 (157)
31 3hx1_A SLR1951 protein; P74513 99.7 1.1E-17 3.8E-22 142.2 10.7 89 286-393 12-110 (131)
32 1k0i_A P-hydroxybenzoate hydro 99.7 4.3E-17 1.5E-21 163.0 13.7 185 1-199 164-351 (394)
33 1g3g_A Protien kinase SPK1; FH 99.7 1.6E-17 5.4E-22 146.8 9.0 104 284-400 32-148 (164)
34 1qu5_A Protein kinase SPK1; FH 99.7 7.9E-18 2.7E-22 150.8 7.0 105 282-400 25-149 (182)
35 3fmw_A Oxygenase; mithramycin, 99.7 2.8E-17 9.7E-22 172.9 11.7 163 40-220 244-409 (570)
36 1pn0_A Phenol 2-monooxygenase; 99.7 4E-17 1.4E-21 174.7 12.8 145 41-199 272-424 (665)
37 1wln_A Afadin; beta sandwich, 99.7 4.9E-17 1.7E-21 136.3 10.4 87 298-400 28-114 (120)
38 1g6g_A Protein kinase RAD53; b 99.7 1.3E-16 4.6E-21 135.0 11.8 79 311-400 37-120 (127)
39 3ihg_A RDME; flavoenzyme, anth 99.7 1.4E-15 4.7E-20 158.7 16.9 145 38-197 224-372 (535)
40 2ff4_A Probable regulatory pro 99.7 2.9E-16 1E-20 157.6 11.1 88 299-405 299-386 (388)
41 2r0c_A REBC; flavin adenine di 99.6 5.3E-16 1.8E-20 162.5 13.2 145 37-199 237-382 (549)
42 2dkh_A 3-hydroxybenzoate hydro 99.6 1.1E-15 3.8E-20 162.9 11.6 143 42-198 253-414 (639)
43 3atr_A Conserved archaeal prot 99.6 5.8E-15 2E-19 150.8 13.7 170 15-198 182-355 (453)
44 3ihm_A Styrene monooxygenase A 99.6 6.7E-15 2.3E-19 149.5 12.1 143 40-193 209-373 (430)
45 3e1t_A Halogenase; flavoprotei 99.6 2.7E-14 9.3E-19 148.2 16.2 182 2-193 174-364 (512)
46 3fm8_A Kinesin-like protein KI 99.6 1.9E-14 6.6E-19 120.5 11.2 72 312-398 50-122 (124)
47 4ejq_A Kinesin-like protein KI 99.6 9.8E-15 3.4E-19 127.4 9.7 85 301-400 56-144 (154)
48 3huf_A DNA repair and telomere 99.5 2E-14 6.8E-19 136.6 10.9 100 286-399 2-113 (325)
49 3oz2_A Digeranylgeranylglycero 99.4 2.5E-12 8.7E-17 127.1 17.1 140 36-188 198-340 (397)
50 3cgv_A Geranylgeranyl reductas 99.4 4.8E-12 1.7E-16 125.7 17.5 149 35-198 197-350 (397)
51 3i3l_A Alkylhalidase CMLS; fla 99.4 2.1E-12 7.1E-17 136.3 13.4 152 36-195 226-378 (591)
52 2gmh_A Electron transfer flavo 99.4 3.2E-12 1.1E-16 134.8 14.1 134 46-191 274-418 (584)
53 4a0e_A YSCD, type III secretio 99.3 3.9E-12 1.3E-16 105.1 9.5 96 284-401 3-99 (123)
54 3kt9_A Aprataxin; FHA domain, 99.3 1.1E-11 3.8E-16 99.6 11.1 93 285-399 4-98 (102)
55 3uv0_A Mutator 2, isoform B; F 99.3 6.5E-12 2.2E-16 98.9 6.9 67 309-390 20-93 (102)
56 2pyx_A Tryptophan halogenase; 99.3 1.7E-11 5.8E-16 127.5 11.7 132 39-191 277-408 (526)
57 3i6u_A CDS1, serine/threonine- 99.2 2.5E-11 8.5E-16 122.6 9.0 98 283-398 7-119 (419)
58 2brf_A Bifunctional polynucleo 99.2 1.6E-10 5.3E-15 93.8 11.1 98 283-399 7-106 (110)
59 3nix_A Flavoprotein/dehydrogen 99.2 2E-10 6.8E-15 115.2 14.2 136 42-188 213-349 (421)
60 2aqj_A Tryptophan halogenase, 99.1 8.3E-11 2.8E-15 122.6 9.9 127 39-191 266-392 (538)
61 2weu_A Tryptophan 5-halogenase 99.1 3.6E-10 1.2E-14 116.8 14.5 131 38-193 272-402 (511)
62 1yj5_C 5' polynucleotide kinas 99.0 1.5E-09 5.2E-14 91.2 10.8 98 283-399 7-106 (143)
63 1ujx_A Polynucleotide kinase 3 99.0 2.5E-10 8.7E-15 93.7 5.7 88 285-390 16-105 (119)
64 2e4g_A Tryptophan halogenase; 99.0 7.9E-10 2.7E-14 115.6 10.7 71 114-194 356-426 (550)
65 4egx_A Kinesin-like protein KI 99.0 4.1E-09 1.4E-13 94.2 12.0 85 300-400 85-174 (184)
66 1wv3_A Similar to DNA segregat 98.6 3.2E-08 1.1E-12 92.2 6.1 65 310-390 92-162 (238)
67 2bry_A NEDD9 interacting prote 98.3 1.7E-07 5.8E-12 96.7 3.5 63 114-187 388-451 (497)
68 3kkj_A Amine oxidase, flavin-c 95.6 0.0089 3E-07 53.5 4.3 36 117-158 293-328 (336)
69 1yvv_A Amine oxidase, flavin-c 92.8 0.12 4.1E-06 49.0 5.6 34 118-157 294-327 (336)
70 1wv3_A Similar to DNA segregat 29.4 54 0.0019 29.5 4.6 34 309-350 20-54 (238)
71 2l52_A Methanosarcina acetivor 29.3 23 0.00078 27.2 1.8 30 355-389 63-94 (99)
72 2k9x_A Tburm1, uncharacterized 28.1 25 0.00085 27.8 1.8 28 359-389 70-97 (110)
73 2cu3_A Unknown function protei 26.8 25 0.00086 24.5 1.5 13 376-388 46-58 (64)
74 1wgk_A Riken cDNA 2900073H19 p 24.8 26 0.0009 27.8 1.4 27 359-388 76-102 (114)
75 3rpf_C Molybdopterin convertin 24.7 46 0.0016 23.8 2.6 25 359-389 45-69 (74)
76 2q5w_D Molybdopterin convertin 23.5 47 0.0016 23.7 2.5 24 358-388 48-71 (77)
77 3mml_A Allophanate hydrolase s 21.4 1.2E+02 0.004 28.7 5.3 32 354-390 78-109 (318)
78 2g1e_A Hypothetical protein TA 20.7 49 0.0017 24.4 2.2 25 359-388 58-84 (90)
79 2hj1_A Hypothetical protein; s 20.2 48 0.0016 25.6 2.0 28 356-390 58-85 (97)
80 3ega_A Pellino-2, protein pell 20.1 3.7E+02 0.013 24.3 8.0 33 309-344 87-134 (263)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.92 E-value=3.3e-24 Score=216.03 Aligned_cols=204 Identities=29% Similarity=0.428 Sum_probs=162.0
Q ss_pred CccCcccCCC-CcccceEEEEEEEeCCCCCCcCCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHH
Q 014684 1 MVRKNLFGPQ-EAIYSGYTCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERL 79 (420)
Q Consensus 1 ~VR~~l~g~~-~~~~sG~~~~rg~~~~~p~~~~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 79 (420)
.||+.+++.. .+.++|+.+|+++++.............|+++++++.++|+++++++|++....+.......+...+.+
T Consensus 182 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (407)
T 3rp8_A 182 ALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLAEDRDTLRADL 261 (407)
T ss_dssp SSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCSCCTTTHHHHH
T ss_pred HHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCCCCchhHHHHH
Confidence 3778886653 678999999999865322222233456778999999999999999888876655443333455678899
Q ss_pred HHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhc
Q 014684 80 LKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKK 159 (420)
Q Consensus 80 ~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~ 159 (420)
.+.|.+|.+.+.++++.........+.++...+.++|..|||+|+|||||.|+|+.|||+|+||+||..|+++|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~--- 338 (407)
T 3rp8_A 262 SRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT--- 338 (407)
T ss_dssp HHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---
T ss_pred HHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---
Confidence 99999999999999988776555567777776668999999999999999999999999999999999999999742
Q ss_pred cCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhcCCCChhhhhhhccCC
Q 014684 160 SNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIP 221 (420)
Q Consensus 160 ~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 221 (420)
. +.+.+|+.|+++|++++..++..++....+.+... .+....|+..+.
T Consensus 339 ------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~-------~~~~~~R~~~l~ 386 (407)
T 3rp8_A 339 ------R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKD-------MQLTEAWYQELR 386 (407)
T ss_dssp ------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-------HHHHHHHHHHHH
T ss_pred ------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-------HHHHHHHHHHHh
Confidence 2 67999999999999999999999988887765432 235577776555
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.89 E-value=2.1e-23 Score=208.76 Aligned_cols=190 Identities=22% Similarity=0.299 Sum_probs=134.9
Q ss_pred ccCcccCCCCcccceEEEEEEEeCCCCC-------CcCCcce-------------EEEEcCCeEEEEEeCCCCe--EEEE
Q 014684 2 VRKNLFGPQEAIYSGYTCYTGIADFVPA-------DIESVGY-------------RVFLGHKQYFVSSDVGAGK--MQWY 59 (420)
Q Consensus 2 VR~~l~g~~~~~~sG~~~~rg~~~~~p~-------~~~~~~~-------------~~~~g~~~~~~~~p~~~g~--~~~~ 59 (420)
||++++++.++.++|+.++.+.....+. ....... .+|.++....+.+++.... ..|+
T Consensus 168 vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (412)
T 4hb9_A 168 VRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWV 247 (412)
T ss_dssp HHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEE
T ss_pred hHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeEEEeccCCCceEEEE
Confidence 7888888878899999999987654221 1111011 1122222221222222222 2233
Q ss_pred EEEeCCCCC----CCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCc
Q 014684 60 AFHKEPAGG----VDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNL 135 (420)
Q Consensus 60 ~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~ 135 (420)
.....+... ....+...+.+.+.|.+|.|.+.++++.++...+..+.++...+.++|..|||+|+|||||+|+|+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~ 327 (412)
T 4hb9_A 248 YVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMT 327 (412)
T ss_dssp EEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCS
T ss_pred EecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEEEEEcccccCCCch
Confidence 222222111 1223345667888899999999999998877677888888888888999999999999999999999
Q ss_pred cchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 014684 136 GQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVM 197 (420)
Q Consensus 136 GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~ 197 (420)
|||+|+||+||.+|+++|...... ..+++++|+.||++|++|++.++..|++....
T Consensus 328 GqG~n~ai~DA~~La~~L~~~~~~------~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~~ 383 (412)
T 4hb9_A 328 GSGANTALRDALLLTQKLASVASG------HEELVKAISDYEQQMRAYANEIVGISLRSAQN 383 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987432 35689999999999999999999998876644
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.89 E-value=2.7e-22 Score=201.53 Aligned_cols=182 Identities=19% Similarity=0.233 Sum_probs=133.8
Q ss_pred ccCcccCCCCcccceEEEEEEEeCCCCCCcC-----CcceEEEEcCCeEEEEEeCCCC------eEEEEEEEeCCCCC--
Q 014684 2 VRKNLFGPQEAIYSGYTCYTGIADFVPADIE-----SVGYRVFLGHKQYFVSSDVGAG------KMQWYAFHKEPAGG-- 68 (420)
Q Consensus 2 VR~~l~g~~~~~~sG~~~~rg~~~~~p~~~~-----~~~~~~~~g~~~~~~~~p~~~g------~~~~~~~~~~~~~~-- 68 (420)
||+++. +..+.|+|+.+|+++++....... .....++++++++++++|++++ .++|+++.+.+...
T Consensus 155 vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 2vou_A 155 VRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDL 233 (397)
T ss_dssp HHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHH
T ss_pred HHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEecCCCccch
Confidence 566666 556789999999998753211110 1234567789999999999864 56677765543210
Q ss_pred -----------CC-------CCcccHHHHHHHh-cCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEccccc
Q 014684 69 -----------VD-------GPEGKKERLLKIF-EGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVH 129 (420)
Q Consensus 69 -----------~~-------~~~~~~~~l~~~~-~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH 129 (420)
+. ..+...+++.+.+ ..|.+ +.++++..+ ....+++++.. .++|+.|||+|+|||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~-~~~~~~grv~LiGDAAH 309 (397)
T 2vou_A 234 DELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNAS--SPFVTVVADAT-VDRMVHGRVLLIGDAAV 309 (397)
T ss_dssp HHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCS--SCEEEEEEEBC-CSCSEETTEEECGGGTS
T ss_pred hhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccC--Ccceeeeeeec-CCceecCcEEEEecccc
Confidence 00 0122344555555 46777 888887664 23567887763 47899999999999999
Q ss_pred ccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 014684 130 AMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMA 198 (420)
Q Consensus 130 ~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~ 198 (420)
+|+|+.|||+|+||+||..|+++|... .+++++|+.|+++|++++..++..++....++
T Consensus 310 ~~~P~~GqG~n~ai~DA~~La~~L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~ 368 (397)
T 2vou_A 310 TPRPHAAAGGAKASDDARTLAEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRL 368 (397)
T ss_dssp BCCGGGSCHHHHHHHHHHHHHHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhHHHHHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999751 35789999999999999999998888776654
No 4
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.86 E-value=5.5e-21 Score=192.10 Aligned_cols=183 Identities=19% Similarity=0.181 Sum_probs=136.5
Q ss_pred CccCcccCCCCcccceEEEEEEEeCCCC---CCc---CCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCC------
Q 014684 1 MVRKNLFGPQEAIYSGYTCYTGIADFVP---ADI---ESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGG------ 68 (420)
Q Consensus 1 ~VR~~l~g~~~~~~sG~~~~rg~~~~~p---~~~---~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~------ 68 (420)
.||+++.+ ..+.|+|+.+|++.++... ... ...+..++++++.+++.+|.+++.++|++....++..
T Consensus 183 ~vR~~l~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T 2xdo_A 183 KVRKFVTD-TEVEETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGISFKTPDEWKNQTQV 261 (398)
T ss_dssp SCCTTTCC-CCCEEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEEEEECCTTC---CCS
T ss_pred hHHhhccC-CCceEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEEEEecCccccccccc
Confidence 37877743 4578999999998865311 000 1123445678888899999999988877655443211
Q ss_pred -CCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccC-C--CEEEEcccccccCCCccchhhhHHH
Q 014684 69 -VDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVHAMQPNLGQGGCMAIE 144 (420)
Q Consensus 69 -~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~-g--rv~LiGDAAH~~~P~~GqG~~~aie 144 (420)
+..++..++.+.+.|.+|.+.+.+++.... .+..++++......+|.. + ||+|+|||||+|+|+.|||+|+||+
T Consensus 262 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~ 339 (398)
T 2xdo_A 262 DFQNRNSVVDFLLKEFSDWDERYKELIHTTL--SFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLV 339 (398)
T ss_dssp CTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS--CCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHH
T ss_pred CcCCHHHHHHHHHHHHcCCChHHHHHHhCcc--cceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHH
Confidence 112233456778889999999999987632 356777877665568976 5 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCChhh-HHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014684 145 DGYQLAVELEKACKKSNESKTPID-IVSALKSYERARRLRVAVIHGLARSAA 195 (420)
Q Consensus 145 Da~~La~~L~~~~~~~~~~~~~~~-~~~~l~~y~~~R~~r~~~~~~~s~~~~ 195 (420)
||.+|+++|... ..+ ++.+|+.|+++|++++..++..+....
T Consensus 340 Da~~La~~L~~~---------~~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~ 382 (398)
T 2xdo_A 340 DALILSDNLADG---------KFNSIEEAVKNYEQQMFIYGKEAQEESTQNE 382 (398)
T ss_dssp HHHHHHHHHHSC---------CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc---------cCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999753 134 789999999999999999998776554
No 5
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.85 E-value=2.5e-20 Score=187.98 Aligned_cols=177 Identities=31% Similarity=0.484 Sum_probs=132.3
Q ss_pred ccCcccCCC-CcccceEEEEEEEeCCCCCCcCCcceEEEEcC--CeEEEEEeCCC-----C--eEEEEEEEeCC------
Q 014684 2 VRKNLFGPQ-EAIYSGYTCYTGIADFVPADIESVGYRVFLGH--KQYFVSSDVGA-----G--KMQWYAFHKEP------ 65 (420)
Q Consensus 2 VR~~l~g~~-~~~~sG~~~~rg~~~~~p~~~~~~~~~~~~g~--~~~~~~~p~~~-----g--~~~~~~~~~~~------ 65 (420)
||+.+.+.. .+.|+|..+|+++.+..+. ......++++. +++++++|+.+ + .++|++....+
T Consensus 171 vR~~l~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~ 248 (410)
T 3c96_A 171 VRAHLHPDQRPLSHGGITMWRGVTEFDRF--LDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLD 248 (410)
T ss_dssp HHHHHCTTCCCCEEEEEEEEEEEEEESCC--TTSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCC
T ss_pred hHHHhcCCCCCCCcCCeeEEEeecccccc--cCCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEEEecCcccccCC
Confidence 677776543 4679999999998653221 11223455664 67889999863 3 34566544321
Q ss_pred CCCCCCCcccHHHHHHHhcCCCh---HHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhH
Q 014684 66 AGGVDGPEGKKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMA 142 (420)
Q Consensus 66 ~~~~~~~~~~~~~l~~~~~~~~~---~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~a 142 (420)
....+......+++.+.|.+|.+ .+.+++.... .+..|+++...+.++|..|||+|+|||||+|+|+.|||+|+|
T Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~a 326 (410)
T 3c96_A 249 NEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQA 326 (410)
T ss_dssp SSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHH
T ss_pred CccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHH
Confidence 11122334567888999998854 4677777664 467788888777789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhH
Q 014684 143 IEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 192 (420)
Q Consensus 143 ieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~ 192 (420)
|+||.+|+++|... .+++.+|+.|+++|++++..++..++
T Consensus 327 i~Da~~La~~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 327 ILDGIELAAALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHHHHHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999762 25689999999999999999998777
No 6
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.83 E-value=1e-20 Score=189.13 Aligned_cols=205 Identities=16% Similarity=0.127 Sum_probs=130.4
Q ss_pred ccceEEEEEEEeCCCCCCcCCcceEEEEcCCeE--EEEEeCCCCeEEEEEEEeCCC---CCC--CCCcccHHHHHHHhcC
Q 014684 13 IYSGYTCYTGIADFVPADIESVGYRVFLGHKQY--FVSSDVGAGKMQWYAFHKEPA---GGV--DGPEGKKERLLKIFEG 85 (420)
Q Consensus 13 ~~sG~~~~rg~~~~~p~~~~~~~~~~~~g~~~~--~~~~p~~~g~~~~~~~~~~~~---~~~--~~~~~~~~~l~~~~~~ 85 (420)
.++++.+|+|+....+ .....+.+.+.+. +..+|++++..++++...... ... ...+..++.+.+.|.+
T Consensus 158 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 233 (381)
T 3c4a_A 158 YGRNKYIWYGTSQLFD----QMNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQA 233 (381)
T ss_dssp EEEEEEEEEEESSCCS----SEEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHH
T ss_pred cCCccEEEEecCCCCC----cceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcc
Confidence 4567889988743211 1111111224444 346999888754333221110 111 1122445667777776
Q ss_pred CChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCC
Q 014684 86 WCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKT 165 (420)
Q Consensus 86 ~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~ 165 (420)
|.+.+ +++... . ..|+++...+.++|+.|||+|+|||||+|+|+.|||+|+||+||.+|+++|...
T Consensus 234 ~~~~~-~l~~~~---~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~--------- 299 (381)
T 3c4a_A 234 ELGGH-GLVSQP---G-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE--------- 299 (381)
T ss_dssp HHTTC-CCBCCT---T-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---------
T ss_pred cCCCc-hhhcCC---C-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---------
Confidence 64332 222211 1 247777666678999999999999999999999999999999999999999863
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHhhhcCCCChhhhhhhccCCCCCcccchhhhhhhhhhHHHHHhc
Q 014684 166 PIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPHPGRVGGRFFIDLAMPLMLSWVLG 245 (420)
Q Consensus 166 ~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
.+++.+|+.|+++|++++..++..++....++......++ .+|.++.|++.+.. . ..++. + .+|+|+
T Consensus 300 -~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~-~--~~~~~-~------~~~~~~ 366 (381)
T 3c4a_A 300 -DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQSFDARR-K--SLPPM-P------EALAQN 366 (381)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHHGGGTT-T--TCCCH-H------HHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHHHhhcc-c--ccccc-C------HHHHHH
Confidence 3578999999999999999999999887766544322222 36778888887765 1 11221 2 678887
Q ss_pred ccC
Q 014684 246 GNS 248 (420)
Q Consensus 246 ~~~ 248 (420)
++.
T Consensus 367 ~~~ 369 (381)
T 3c4a_A 367 LRY 369 (381)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 7
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=159.99 Aligned_cols=101 Identities=23% Similarity=0.393 Sum_probs=80.9
Q ss_pred CCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEE-----------ECCEEEEE
Q 014684 283 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLI 351 (420)
Q Consensus 283 ~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~-----------~~~~~~i~ 351 (420)
...|.|....++. ....+.|. .+..++|||.++ |||+|++++|||+||.|.+ .++.|+|+
T Consensus 18 ~~~~~L~v~k~g~-~~~~~~L~---~~~~~~IGR~~~-----~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~ 88 (130)
T 4h87_A 18 TAPYSLETLKGGT-ILGTRSLK---GTSYCLFGRLSG-----CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLY 88 (130)
T ss_dssp CSCCEEEEEETTE-EEEEEECT---TCSEEEEESSTT-----SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEE
T ss_pred CCCEEEEEEECCe-eeeeEEeC---CCceEEEcCCcC-----CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEe
Confidence 3457776654442 33667776 234479999987 9999999999999999964 36779999
Q ss_pred EcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 014684 352 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 398 (420)
Q Consensus 352 Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~ 398 (420)
||+|+|||||||. +|.+++++.|++||+|+||..+. .|.++
T Consensus 89 Dl~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str-~yvl~ 129 (130)
T 4h87_A 89 DLGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTR-LFILQ 129 (130)
T ss_dssp ECSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSE-EEEEE
T ss_pred eCCCCCceEECCE-----ECCCCceeECCCCCEEEECCceE-EEEEc
Confidence 9999999999999 99999999999999999999854 46554
No 8
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.82 E-value=2.4e-21 Score=193.35 Aligned_cols=174 Identities=21% Similarity=0.250 Sum_probs=123.7
Q ss_pred ccCcccCCCCcccceEEEEEEEeCCC----CCCcCCcceEE--EEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCccc
Q 014684 2 VRKNLFGPQEAIYSGYTCYTGIADFV----PADIESVGYRV--FLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGK 75 (420)
Q Consensus 2 VR~~l~g~~~~~~sG~~~~rg~~~~~----p~~~~~~~~~~--~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~ 75 (420)
||+.+.++..+.++|+.+|+++++.. +.........+ ++++++++.++|+++++.+|++....... .
T Consensus 162 vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~----- 234 (379)
T 3alj_A 162 VRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADP--R----- 234 (379)
T ss_dssp HHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTCT--T-----
T ss_pred HHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCCC--C-----
Confidence 56666555456889999999986542 22111112223 57888999999999999888765543111 0
Q ss_pred HHHHHHHhcCCChHHH---HHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHH
Q 014684 76 KERLLKIFEGWCDNVV---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVE 152 (420)
Q Consensus 76 ~~~l~~~~~~~~~~~~---~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~ 152 (420)
.+++.+.|.+|.+.+. +++...+...+..|+++...+.++|..|||+|+|||||.|+|+.|||+|+||+||.+|+++
T Consensus 235 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~ 314 (379)
T 3alj_A 235 GSSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQD 314 (379)
T ss_dssp TTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHH
Confidence 1233333444433333 5665432223566788775556789999999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhH
Q 014684 153 LEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 192 (420)
Q Consensus 153 L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~ 192 (420)
|... .+++.+|+.|+++|++++..++..+.
T Consensus 315 L~~~----------~~~~~~l~~Y~~~r~~~~~~~~~~s~ 344 (379)
T 3alj_A 315 LEEG----------SSVEDALVAWETRIRPITDRCQALSG 344 (379)
T ss_dssp TTSS----------SCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccc----------cCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9631 35689999999999999999998773
No 9
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.82 E-value=6.3e-20 Score=156.15 Aligned_cols=93 Identities=23% Similarity=0.284 Sum_probs=80.8
Q ss_pred ccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--CCEEEEEEcCCCccceecCCCCceEeecCC
Q 014684 297 VSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYRVSSN 374 (420)
Q Consensus 297 ~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~ 374 (420)
..+.+.|. ...++|||.++ |||+++++.|||.||.|.+. ++.|+|+|++|+|||||||. +++|.++
T Consensus 36 ~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~---~i~l~~~ 103 (132)
T 3va4_A 36 PERDFPLY----LGKNVVGRSPD-----CSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP---PRVLPPG 103 (132)
T ss_dssp SCEEEEEC----SEEEEEESSTT-----SSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT---TEEECTT
T ss_pred CceEEEEC----CCCEEEccCCC-----CCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE---EcccCCC
Confidence 44889999 55599999987 99999999999999999997 68899999999999999998 1227888
Q ss_pred CcEEeCCCCEEEECCCceeEEEEEEecCCC
Q 014684 375 FPARFRPSDTIEFGSDKKAIFRVKVIGTPP 404 (420)
Q Consensus 375 ~~~~L~~Gd~i~~G~~~~~~~~~~~~~~~p 404 (420)
+++.|++||+|+||+. .|+|.....+|
T Consensus 104 ~~~~L~~GD~I~lG~~---~l~f~~~~~p~ 130 (132)
T 3va4_A 104 VSHRLRDQELILFADF---PCQYHRLDVPP 130 (132)
T ss_dssp CCEECCTTCEEEETTE---EEEEEECCCCC
T ss_pred CEEECCCCCEEEECCE---EEEEEECCCCC
Confidence 8999999999999998 67777765544
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.81 E-value=1.4e-20 Score=188.89 Aligned_cols=187 Identities=18% Similarity=0.194 Sum_probs=133.8
Q ss_pred ccCcccCCCCcc--cceE--EEEEEEeCCCCCCcCCcceEEEEcC-CeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccH
Q 014684 2 VRKNLFGPQEAI--YSGY--TCYTGIADFVPADIESVGYRVFLGH-KQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKK 76 (420)
Q Consensus 2 VR~~l~g~~~~~--~sG~--~~~rg~~~~~p~~~~~~~~~~~~g~-~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~ 76 (420)
||+.+..+..+. +.+. .+|++.++.. .. . .. .++++ ++++.++|++++.++|+...+...........+.
T Consensus 168 vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--~~-~-~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T 2x3n_A 168 VRRRLLDIDVERRPYPSPMLVGTFALAPCV--AE-R-NR-LYVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRG 242 (399)
T ss_dssp HHHHTSCCCCCCCCCSSCEEEEEEECCHHH--HH-C-EE-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHHHHSTTS
T ss_pred HHHHhCCCccccCCCCCCceEEEEEEecCC--CC-C-cc-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccccccCCH
Confidence 455553333445 7777 8888765321 11 1 13 77888 9999999999888777653321110000011345
Q ss_pred HHHHHHhcCCChHHH-HHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHH
Q 014684 77 ERLLKIFEGWCDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEK 155 (420)
Q Consensus 77 ~~l~~~~~~~~~~~~-~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~ 155 (420)
+++.+.+..|.+.+. ..++...+..+..|+++.....++|..|||+|+|||||.|+|+.|||+|+||+||..|+++|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~ 322 (399)
T 2x3n_A 243 ESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDL 322 (399)
T ss_dssp HHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHh
Confidence 678888888988773 4445544223466788774455789999999999999999999999999999999999999988
Q ss_pred hhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 014684 156 ACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMAS 199 (420)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~ 199 (420)
..+. ..+++.+|+.|+++|++++..++..++...+++.
T Consensus 323 ~~~~------~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~ 360 (399)
T 2x3n_A 323 ALRD------ACALEDALAGYQAERFPVNQAIVSYGHALATSLE 360 (399)
T ss_dssp HHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhcc------cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhc
Confidence 6431 1357899999999999999999998888776654
No 11
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.80 E-value=2.6e-19 Score=146.91 Aligned_cols=100 Identities=21% Similarity=0.433 Sum_probs=82.0
Q ss_pred CCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE-CCEEEEEEcCCCcccee
Q 014684 283 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYV 361 (420)
Q Consensus 283 ~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~i~Dl~S~nGt~v 361 (420)
.+.|.|....+.. .++.+.|. . +..++|||.+.. |||+++++.|||.||.|.++ ++.|+|+|++|+|||||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~-~--~~~~~iGR~~~~----~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~v 73 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLD-S--GKTYIVGSDPQV----ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIV 73 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEEC-T--TCEEEEESCTTT----CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEE
T ss_pred CceEEEEEEeCCC-CcEEEEEC-C--CCEEEEeECCCc----CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEE
Confidence 4678888876544 45889998 2 234799999832 99999999999999999999 78899999999999999
Q ss_pred cCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 014684 362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 362 ng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
||+ ++.+ +..|++||+|+||.. .|+|.-.
T Consensus 74 ng~-----~i~~--~~~L~~Gd~i~~G~~---~~~~~~~ 102 (106)
T 3gqs_A 74 EGR-----KIEH--QSTLSANQVVALGTT---LFLLVDY 102 (106)
T ss_dssp TTE-----ECSS--EEECCTTCCEEETTE---EEEEEEE
T ss_pred CCE-----ECCC--CeECCCCCEEEECCE---EEEEEcc
Confidence 999 8874 579999999999998 5666543
No 12
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.80 E-value=2.8e-19 Score=153.72 Aligned_cols=105 Identities=18% Similarity=0.273 Sum_probs=88.9
Q ss_pred HhcCCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCc----ccccceEEEE-ECCEEEEEEcC
Q 014684 280 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQ 354 (420)
Q Consensus 280 ~~~~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~-~~~~~~i~Dl~ 354 (420)
++....|+|...+... ..+.|. .+..++|||.+. |||+++++. |||.||.|.+ .++.|+|+|++
T Consensus 4 ~~~~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 72 (138)
T 2pie_A 4 MAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 72 (138)
T ss_dssp GGGCEEEEEEETTCSS---CBEEEC---TTCCEEEESSSS-----SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECS
T ss_pred CCCCccEEEEEeCCCC---CEEEec---CCCeEEECCCCC-----CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECC
Confidence 4556789999987664 567775 244599999997 999999998 9999999999 58889999999
Q ss_pred CCccceecCCCCceEeecCCCcEEeCCCCEEEECCC----ceeEEEEEEe
Q 014684 355 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKVI 400 (420)
Q Consensus 355 S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~----~~~~~~~~~~ 400 (420)
|+|||||||. ++.+++++.|++||+|.||.. ..+.|.++..
T Consensus 73 S~NGT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 73 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CSSCEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CCCCeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999999999 999988999999999999983 3456776654
No 13
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.79 E-value=4.3e-19 Score=148.50 Aligned_cols=100 Identities=20% Similarity=0.282 Sum_probs=82.1
Q ss_pred CeEEEEEcCCCCcccccEEEeecCCCCcEEEcCC-CCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceec
Q 014684 284 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 362 (420)
Q Consensus 284 ~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~-~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 362 (420)
..|.|....+.. ..+.+.|. . +..++|||. +. |||+++++.|||+||+|.++++.|+|+|++|+||||||
T Consensus 11 p~l~L~v~~g~~-~g~~~~l~-~--~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 11 PSLRLVFVKGPR-EGDALDYK-P--GSTIRVGRIVRG-----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLN 81 (118)
T ss_dssp CEEEEEESSSTT-TTCBCCBC-T--TCCEEEESSSTT-----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEES
T ss_pred CeEEEEEEeCCC-CCcEEEEC-C--CCEEEEcCCCCC-----CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEEC
Confidence 356666654332 34778887 2 245999999 55 99999999999999999999999999999999999999
Q ss_pred CCCCceEeecCCCcEEeCCCCEEEECCCceeEEEE
Q 014684 363 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRV 397 (420)
Q Consensus 363 g~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~ 397 (420)
|+ ++.+++++.|++||+|+||......+++
T Consensus 82 g~-----~l~~~~~~~L~~gd~i~lG~~~~~~~~~ 111 (118)
T 1uht_A 82 SN-----ALDPETSVNLGDGDVIKLGEYTSILVNF 111 (118)
T ss_dssp SS-----BCCTTCEEECCTTEEEEETTTEEEEEEE
T ss_pred CE-----ECCCCCeEEcCCCCEEEECCeEEEEEEE
Confidence 99 9998889999999999999984333333
No 14
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.78 E-value=8.8e-19 Score=145.87 Aligned_cols=97 Identities=24% Similarity=0.371 Sum_probs=80.9
Q ss_pred hcCCeEEEEEc-CCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccc
Q 014684 281 AMNGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT 359 (420)
Q Consensus 281 ~~~~~w~l~~~-~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt 359 (420)
.....+.|+.. +... .+.+.|. ...++|||.+. |||+++++.|||.||+|.++++.|+|+|++|+|||
T Consensus 7 ~p~~~~~L~v~~g~~~--g~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt 75 (115)
T 2xt9_B 7 LPSGSALLVVKRGPNA--GSRFLLD----QPTTSAGRHPD-----SDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGT 75 (115)
T ss_dssp -CCSCEEEEEEESTTT--TCEEEEC----SSEEEEESSTT-----SSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCE
T ss_pred CCCCcEEEEEEeCCCC--CeEEEEC----CCCEEECCCCC-----CCEEeCCcccChhheEEEEECCEEEEEECCCCCCe
Confidence 34455555544 4443 3889998 56699999987 99999999999999999999999999999999999
Q ss_pred eecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 014684 360 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 360 ~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~ 399 (420)
||||. ++. +..|++||+|+||.. .|+|..
T Consensus 76 ~vng~-----~i~---~~~L~~gd~i~iG~~---~l~~~~ 104 (115)
T 2xt9_B 76 YVNRE-----PVD---SAVLANGDEVQIGKF---RLVFLT 104 (115)
T ss_dssp EETTE-----ECS---EEEECTTCEEEETTE---EEEEEC
T ss_pred EECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 99998 886 589999999999987 566654
No 15
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.78 E-value=8.8e-19 Score=142.22 Aligned_cols=83 Identities=24% Similarity=0.372 Sum_probs=74.1
Q ss_pred cccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCcE
Q 014684 298 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 377 (420)
Q Consensus 298 ~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~ 377 (420)
.+.+.|. ...++|||+++ |||+++++.|||.||.|.++++.|+|+|++|+|||||||. ++. +.
T Consensus 15 g~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~ 77 (100)
T 3po8_A 15 GRTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 77 (100)
T ss_dssp CCEEECC----SEEEEEESSTT-----CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CcEEEEC----CCCEEEeCCCC-----CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eE
Confidence 4889998 55599999987 9999999999999999999999999999999999999998 885 68
Q ss_pred EeCCCCEEEECCCceeEEEEEEe
Q 014684 378 RFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 378 ~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
.|++||+|+||.. .|+|++.
T Consensus 78 ~L~~gd~i~iG~~---~~~~~~~ 97 (100)
T 3po8_A 78 QLADGDVIRLGHS---EIIVRMH 97 (100)
T ss_dssp ECCTTCEEEETTE---EEEEEEE
T ss_pred ECCCCCEEEECCE---EEEEEEE
Confidence 9999999999997 4555543
No 16
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.8e-19 Score=157.94 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=88.1
Q ss_pred hhhhccchHHHHh-----------cCCeEEEEEcCCCCc---ccccEEEeecCCCCcEEEcCCCC----------CCCCc
Q 014684 269 RTWFRDDDALERA-----------MNGEWFLVPSGSENV---VSQPIYLSVSHENEPYLIGSESH----------EDFSR 324 (420)
Q Consensus 269 ~~~~~~~~ale~~-----------~~~~w~l~~~~~~~~---~~~~~~l~~~~~~~~~~IGR~~~----------~~~~~ 324 (420)
++|.+..+|..+. ....|.|+...++.. ..+.+.|. .+..++|||.+. ++...
T Consensus 4 l~~~ep~~a~~p~~~w~~~~~~~~~~~~~~l~v~k~g~~~~~~~~~~~L~---~~~~~~IGR~~~~~~~~~~~~~n~~~~ 80 (158)
T 3els_A 4 GKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVV 80 (158)
T ss_dssp -CCCCCTTBCCHHHHHHHTTCCGGGSCCEEEEEEEGGGGGGCCSEEEECS---SCSEEEEEECCCC---------CCCCC
T ss_pred eEecCCccccCCchhhhccccCcccCCceEEEEEeCCccCcccceEEEec---CCCceEecccccccccccccccccccc
Confidence 4555555555442 245687777754431 34677787 344589999963 12234
Q ss_pred ceEEeCCCcccccceEEEEECCE----EEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCc
Q 014684 325 TSIVIPSAQVSKMHARISYKDGA----FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 391 (420)
Q Consensus 325 ~~i~~~~~~vSr~Ha~i~~~~~~----~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~ 391 (420)
|||+|+++.|||+||.|.+.++. |+|+|++|+|||||||. +|.++.+++|++||+|+||..+
T Consensus 81 ~Di~l~~~~VSr~HA~I~~~~~~~~~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 81 ADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp CSEEECCTTSCSSCEEEEEEEETTEEEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCG
T ss_pred CCEEcCCCCCCcccEEEEEEccCCeeEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCC
Confidence 99999999999999999988655 99999999999999999 9999889999999999999763
No 17
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.78 E-value=7.5e-19 Score=151.57 Aligned_cols=99 Identities=22% Similarity=0.334 Sum_probs=82.0
Q ss_pred HhcCCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccc
Q 014684 280 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT 359 (420)
Q Consensus 280 ~~~~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt 359 (420)
....+.|.|+...+.. .+..+.|. ...++|||.+. |||+|+++.|||+||.|.+.++.|+|+|++|+|||
T Consensus 41 ~~p~~~~~L~v~~G~~-~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT 110 (143)
T 2kb3_A 41 NLPAGSALLVVKRGPN-AGARFLLD----QPTTTAGRHPE-----SDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGT 110 (143)
T ss_dssp TCSSSCEEEEEEESTT-TTCEEEEC----SSEEEESSCTT-----CSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCC
T ss_pred cCCCccEEEEEEeCCC-CCeEEEeC----CCCeeccCCCC-----CCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCe
Confidence 3345556666554332 24889998 56699999987 99999999999999999999999999999999999
Q ss_pred eecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 014684 360 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 360 ~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~ 399 (420)
||||. ++. +..|++||+|+||.. .|+|..
T Consensus 111 ~VNg~-----~i~---~~~L~~GD~I~iG~~---~l~f~~ 139 (143)
T 2kb3_A 111 YVNRE-----PRN---AQVMQTGDEIQIGKF---RLVFLA 139 (143)
T ss_dssp EETTE-----ECS---EEECCTTEEEEETTE---EEEEEE
T ss_pred EECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 99998 886 589999999999987 555553
No 18
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.77 E-value=1.1e-18 Score=152.36 Aligned_cols=97 Identities=22% Similarity=0.344 Sum_probs=78.8
Q ss_pred eE-EEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEE--------ECCEEEEEEcCC
Q 014684 285 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLIDLQS 355 (420)
Q Consensus 285 ~w-~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~--------~~~~~~i~Dl~S 355 (420)
.| .|+..++.. .+.+.|. . +..++|||.+. |||+|+++.|||.||+|.+ .++.|+|+|+ |
T Consensus 17 ~~~~L~~~~~~~--g~~~~l~-~--~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S 85 (151)
T 2jqj_A 17 CLGHLVNLIPGK--EQKVEIT-N--RNVTTIGRSRS-----CDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-S 85 (151)
T ss_dssp EEEEEEEEETTE--EEEEEEE-C--CSCEEEESSTT-----SSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-C
T ss_pred ceEEEEEecCCC--ceEEEEc-C--CCeEEeCCCCC-----CCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-C
Confidence 44 344444332 4788887 2 25599999987 9999999999999999999 7788999999 9
Q ss_pred CccceecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 014684 356 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 356 ~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
+|||||||. +|.++ +..|++||+|.||.+. .|+|...
T Consensus 86 ~NGT~VNg~-----~i~~~-~~~L~~GD~I~lG~~~--~~~f~~~ 122 (151)
T 2jqj_A 86 RNGTFINGN-----RLVKK-DYILKNGDRIVFGKSC--SFLFKYA 122 (151)
T ss_dssp SSCEEETTE-----ECCSS-CEEECSSEEEEETTTE--EEEEEEC
T ss_pred CCCeEECCE-----EcCCC-ceECCCCCEEEECCCc--EEEEEEc
Confidence 999999999 99877 8999999999999953 3555554
No 19
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.76 E-value=2.7e-18 Score=149.46 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=83.1
Q ss_pred HhcCCeE-EEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCc---------ccccceEEEEECC---
Q 014684 280 RAMNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG--- 346 (420)
Q Consensus 280 ~~~~~~w-~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~---------vSr~Ha~i~~~~~--- 346 (420)
+.+...| .|++.... ...+.|. +..++|||.+. |||+++++. |||.||.|.+.++
T Consensus 24 ~~~~~~w~~L~~~~~~---~~~i~L~----~~~~~IGR~~~-----~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~ 91 (149)
T 1gxc_A 24 EPTPAPWARLWALQDG---FANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKN 91 (149)
T ss_dssp -----CCEEEEECSTT---CCCEEEC----SSEEEEESSTT-----CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTS
T ss_pred CCCCCeeEEEEEcCCC---CceEEEC----CCCEEecCCCC-----CCEEECCccccccccCCcCchhheEEEEECCCCc
Confidence 4445567 55555432 2568898 66699999986 999999985 9999999999866
Q ss_pred --EEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 014684 347 --AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 347 --~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
.|+|+|+ |+|||||||. +|.++.++.|++||+|.||......|.|.-.
T Consensus 92 ~~~~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d~ 141 (149)
T 1gxc_A 92 SYIAYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDL 141 (149)
T ss_dssp SEEEEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEET
T ss_pred eeEEEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEEEEEEC
Confidence 8999996 9999999999 9999999999999999999976667777654
No 20
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.76 E-value=5.3e-19 Score=153.22 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=84.5
Q ss_pred HhcCCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCc----ccccceEEEEE-CCEEEEEEcC
Q 014684 280 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQ 354 (420)
Q Consensus 280 ~~~~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~----vSr~Ha~i~~~-~~~~~i~Dl~ 354 (420)
++....|+|+..+... ..+.|. .+..++|||.+. |||+++++. |||.||+|.+. ++.|+|+|++
T Consensus 12 ~~~~~~w~L~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 80 (145)
T 2csw_A 12 RAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 80 (145)
T ss_dssp TTCSEEEEECCTTCSC---CBEECC---TTCCEEEESSTT-----SSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSS
T ss_pred CCCCccEEEEEeCCCC---CeEEeC---CCCcEEECCCCC-----CCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECC
Confidence 3445679998444332 567775 245599999997 999999998 99999999995 8889999999
Q ss_pred CCccceecCCCCceEeecCCCcEEeCCCCEEEECCC----ceeEEEEEE
Q 014684 355 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKV 399 (420)
Q Consensus 355 S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~----~~~~~~~~~ 399 (420)
|+|||||||. ++.+++++.|++||+|+||.. ..+.|.|.+
T Consensus 81 S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~g~~~~f~~~~ 124 (145)
T 2csw_A 81 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEV 124 (145)
T ss_dssp CSSCEEESSC-----BCCBTCCEECCSSCCEEESCCCTTCSSCSCCCCE
T ss_pred CCCCeEECCE-----ECCCCccEECCCCCEEEECCCCCCCceEEEEEEe
Confidence 9999999999 999888999999999999983 234455544
No 21
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.76 E-value=1.7e-18 Score=144.35 Aligned_cols=100 Identities=24% Similarity=0.346 Sum_probs=83.4
Q ss_pred eE-EEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCC-cccccceEEEEE--CCEEEEEEcCCCccce
Q 014684 285 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTY 360 (420)
Q Consensus 285 ~w-~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~ 360 (420)
.| .|++..+. .....+.|. ...++|||.+. |||+|++. .|||.||.|.++ ++.|+|+| +|+||||
T Consensus 3 ~wg~L~~~~~~-~~~~~~~l~----~~~~~iGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~ 71 (116)
T 1lgp_A 3 PWGRLLRLGAE-EGEPHVLLR----KREWTIGRRRG-----CDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTV 71 (116)
T ss_dssp CCEEECCTTCC-SSSCCEEEC----SSEEEEESSTT-----SSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCC
T ss_pred CEEEEEEeCCC-CCccEEEEC----CCCEEECCCCC-----CCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcE
Confidence 46 45555443 234789999 66699999997 99999875 999999999997 88999999 9999999
Q ss_pred ecCCCCceEeecCCCcEEeCCCCEEEECCCc-----eeEEEEEEe
Q 014684 361 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDK-----KAIFRVKVI 400 (420)
Q Consensus 361 vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~-----~~~~~~~~~ 400 (420)
|||. ++.+++++.|++||+|.||..+ .+.|.|...
T Consensus 72 vng~-----~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 72 INKL-----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp CCCC-----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred ECCE-----EcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999 9998889999999999999864 466766544
No 22
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.76 E-value=2e-18 Score=178.89 Aligned_cols=153 Identities=16% Similarity=0.116 Sum_probs=103.9
Q ss_pred eEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCc
Q 014684 36 YRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 115 (420)
Q Consensus 36 ~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~ 115 (420)
..++++++++++++|++++..++++..............+.+++.+.+..+.+.. +..........|++..+ ..++
T Consensus 199 ~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~-~a~~ 274 (499)
T 2qa2_A 199 PIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLTGQD---ISHGEPVWVSAFGDPAR-QVSA 274 (499)
T ss_dssp EEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCC---CTTCEEEEEEEECCCEE-ECSC
T ss_pred eEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHhCCC---CCccceeEEEEEeCCcE-Eccc
Confidence 4567788999999999988766655442222111223345556655544321100 00001111122333222 2368
Q ss_pred ccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014684 116 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 195 (420)
Q Consensus 116 w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~ 195 (420)
|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|...+++ ...+++|+.|+++|+++++.++..++...
T Consensus 275 ~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g-------~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~ 347 (499)
T 2qa2_A 275 YRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG-------RAPAGLLDTYHEERHPVGRRLLMNTQAQG 347 (499)
T ss_dssp SEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT-------SSCTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987532 12478999999999999999998888766
Q ss_pred HHHH
Q 014684 196 VMAS 199 (420)
Q Consensus 196 ~~~~ 199 (420)
.++.
T Consensus 348 ~l~~ 351 (499)
T 2qa2_A 348 MLFL 351 (499)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6553
No 23
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.76 E-value=1.9e-19 Score=155.12 Aligned_cols=93 Identities=24% Similarity=0.451 Sum_probs=79.6
Q ss_pred CeEEEEEcCCCCcccccEEEeecCCCC-cEEEcCCCCCCCCcceEEeCCCcccccceEEEEEC--CEEEEEEcCCCccce
Q 014684 284 GEWFLVPSGSENVVSQPIYLSVSHENE-PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGTY 360 (420)
Q Consensus 284 ~~w~l~~~~~~~~~~~~~~l~~~~~~~-~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~--~~~~i~Dl~S~nGt~ 360 (420)
..|.|+...+.. ..+.+.|. .. .++|||.++. |||+|+++.|||+||+|.+++ +.|+|+|++|+||||
T Consensus 33 ~~~~L~v~~g~~-~g~~~~l~----~~~~~~IGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~ 103 (140)
T 2jpe_A 33 PGLHLDVVKGDK-LIEKLIID----EKKYYLFGRNPDL----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTF 103 (140)
T ss_dssp SSCBEEEESSSS-EEEEECCS----SCSBCCBSSCTTT----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEE
T ss_pred cCEEEEEEcCCC-cceEEEeC----CCCeEEecCCCcc----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeE
Confidence 456666654432 34677777 43 4999999864 889999999999999999997 899999999999999
Q ss_pred ecCCCCceEeecCCCcEEeCCCCEEEECCC
Q 014684 361 VTDNEGRRYRVSSNFPARFRPSDTIEFGSD 390 (420)
Q Consensus 361 vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~ 390 (420)
|||. ++.+++++.|++||+|+||..
T Consensus 104 vNg~-----~l~~~~~~~L~~gd~i~~G~~ 128 (140)
T 2jpe_A 104 LGHI-----RLEPHKPQQIPIDSTVSFGAS 128 (140)
T ss_dssp SSSC-----EECSSSCCEECTTCCBBCSSC
T ss_pred ECCE-----ECCCCccEECCCCCEEEECCc
Confidence 9999 999988999999999999998
No 24
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.75 E-value=3.2e-18 Score=177.45 Aligned_cols=152 Identities=15% Similarity=0.120 Sum_probs=102.7
Q ss_pred eEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCCh-HHHHHHHhcCccceeEeeecccCCCC
Q 014684 36 YRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCD-NVVDLILATDEEAILRRDIYDRTPIF 114 (420)
Q Consensus 36 ~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~li~~~~~~~~~~~~l~~~~~~~ 114 (420)
..+++.++++++++|++++..++++..............+.+++.+.+..+.+ .+ ..........|++..+ ..+
T Consensus 198 ~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~-~a~ 272 (500)
T 2qa1_A 198 MIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDI----AHAEPVWVSAFGNATR-QVT 272 (500)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCC----TTSEEEEEEEEECCEE-ECS
T ss_pred eEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCC----CccceeEEEEeccCcE-Ecc
Confidence 45677889999999999987666654322211111223445555555443211 00 0001111123333222 236
Q ss_pred cccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 014684 115 TWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 194 (420)
Q Consensus 115 ~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~ 194 (420)
+|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|...+++ ...+++|+.|+++|+++++.++..++..
T Consensus 273 ~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g-------~~~~~~L~~Y~~eR~~~~~~~~~~s~~~ 345 (500)
T 2qa1_A 273 EYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG-------TATEELLDSYHSERHAVGKRLLMNTQAQ 345 (500)
T ss_dssp CSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT-------SSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999987532 2347899999999999999999888876
Q ss_pred HHHHH
Q 014684 195 AVMAS 199 (420)
Q Consensus 195 ~~~~~ 199 (420)
..++.
T Consensus 346 ~~l~~ 350 (500)
T 2qa1_A 346 GLLFL 350 (500)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66553
No 25
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.75 E-value=1.7e-18 Score=146.87 Aligned_cols=86 Identities=24% Similarity=0.262 Sum_probs=76.2
Q ss_pred ccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCc
Q 014684 297 VSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 376 (420)
Q Consensus 297 ~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~ 376 (420)
..+.+.|. ...++|||.+. |||+++++.|||.||.|.++++.|+|+|++|+|||||||. ++. ++
T Consensus 24 ~g~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~ 87 (128)
T 1r21_A 24 DGPHFPLS----LSTCLFGRGIE-----CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EP 87 (128)
T ss_dssp EEEEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SC
T ss_pred CceEEEEC----CCCEEECCCCC-----CCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--Cc
Confidence 34788888 56699999987 9999999999999999999999999999999999999999 886 46
Q ss_pred EEeCCCCEEEECCCceeEEEEEEec
Q 014684 377 ARFRPSDTIEFGSDKKAIFRVKVIG 401 (420)
Q Consensus 377 ~~L~~Gd~i~~G~~~~~~~~~~~~~ 401 (420)
..|++||+|.||.. .|+|....
T Consensus 88 ~~L~~Gd~i~iG~~---~~~~~~~~ 109 (128)
T 1r21_A 88 VRLKHGDVITIIDR---SFRYENES 109 (128)
T ss_dssp EECCTTEEEECSSC---EEEEEEC-
T ss_pred EEcCCCCEEEECCE---EEEEEeCC
Confidence 89999999999988 66676653
No 26
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.75 E-value=2e-18 Score=155.82 Aligned_cols=118 Identities=20% Similarity=0.263 Sum_probs=86.0
Q ss_pred cchhhhhccchHHHHhc-----------CCeEEEEEcCCCC---cccccEEEeecCCCCcEEEcCCCCCC----------
Q 014684 266 DNLRTWFRDDDALERAM-----------NGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESHED---------- 321 (420)
Q Consensus 266 ~~~~~~~~~~~ale~~~-----------~~~w~l~~~~~~~---~~~~~~~l~~~~~~~~~~IGR~~~~~---------- 321 (420)
+-+++|.+..+|..+.. ...|.|....++. .....+.|. +...++|||.+..+
T Consensus 48 gv~lky~eP~~a~~P~~~w~~~~~~~~~~~~~~L~v~k~g~k~~~~i~~~~L~---~~s~y~IGR~~~~~~~~~~~~~~e 124 (205)
T 3elv_A 48 GIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTE 124 (205)
T ss_dssp ----CCCCCTTBCCHHHHHHHTTCCGGGSCCEEEEEEEGGGCTTCCSEEEECS---SCSEEEEEECCCC---------CC
T ss_pred cEEEeccCCCcccCCchHHhhcccccccCCceEEEEEeCCCcccccceEEEec---CCCceeeccccccccccccccccc
Confidence 44566666665544422 3457777764332 133678886 24569999996311
Q ss_pred CCcceEEeCCCcccccceEEEEEC-C---EEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCc
Q 014684 322 FSRTSIVIPSAQVSKMHARISYKD-G---AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 391 (420)
Q Consensus 322 ~~~~~i~~~~~~vSr~Ha~i~~~~-~---~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~ 391 (420)
...|||+|++++|||+||.|.+.. + .|+|+|++|+|||||||. +|.+..++.|++||+|+||..+
T Consensus 125 ~~~cDIvL~dp~VSR~HA~I~~~~~~~~~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 125 IVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp CCCCSEEECCTTSCTTCEEEEEEEETTEEEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred CccceEEeCCCCCCcccEEEEEecCCCceeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 123999999999999999998763 2 499999999999999999 9998888999999999999764
No 27
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.75 E-value=8.5e-18 Score=144.59 Aligned_cols=95 Identities=23% Similarity=0.378 Sum_probs=77.6
Q ss_pred eEEEEEcCCCCcccccEEEeecCC--CCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECC--EEEEEEcCCCccce
Q 014684 285 EWFLVPSGSENVVSQPIYLSVSHE--NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG--AFYLIDLQSEHGTY 360 (420)
Q Consensus 285 ~w~l~~~~~~~~~~~~~~l~~~~~--~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~--~~~i~Dl~S~nGt~ 360 (420)
.+.|....+. ..++.+.|. ... +..++|||.++ |+|+++++.|||+||+|.++++ .|+|+|++|+||||
T Consensus 7 ~~~L~v~~G~-~~g~~~~l~-~~~~~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~ 79 (139)
T 1mzk_A 7 WLFLEVIAGP-AIGLQHAVN-STSSSKLPVKLGRVSP-----SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTL 79 (139)
T ss_dssp EEEEEECSST-TCSCEEEEC-TTCSTTCSEEEESSSS-----CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCE
T ss_pred eEEEEEEeCC-CCCeEEEec-CCCCccceEEeeCCCC-----CCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEE
Confidence 3455554432 244788888 320 13699999998 9999999999999999999864 79999999999999
Q ss_pred ecCCCCceEeecC--------CCcEEeCCCCEEEECCCc
Q 014684 361 VTDNEGRRYRVSS--------NFPARFRPSDTIEFGSDK 391 (420)
Q Consensus 361 vng~~~~~~~l~~--------~~~~~L~~Gd~i~~G~~~ 391 (420)
|||. ++.+ ++++.|++||+|+||...
T Consensus 80 vNg~-----~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~ 113 (139)
T 1mzk_A 80 VNSH-----SISHPDLGSRKWGNPVELASDDIITLGTTT 113 (139)
T ss_dssp ETTE-----ESSCCCTTTCCCCCCEECCTTEEEECSSSC
T ss_pred ECCE-----ECcCcccccccCCceEECCCCCEEEECCEE
Confidence 9999 8874 678999999999999983
No 28
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.75 E-value=6e-18 Score=148.61 Aligned_cols=96 Identities=23% Similarity=0.344 Sum_probs=80.4
Q ss_pred CCeEEEEE-cCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCcccee
Q 014684 283 NGEWFLVP-SGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 361 (420)
Q Consensus 283 ~~~w~l~~-~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~v 361 (420)
...|.|+. .+... .+.+.|. ...++|||.+. |||+|+++.|||+||+|.++++.|+|+|++|+|||||
T Consensus 53 ~~~~~L~v~~G~~~--g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~V 121 (162)
T 2kfu_A 53 PGSALLVVKRGPNA--GSRFLLD----QAITSAGRHPD-----SDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYV 121 (162)
T ss_dssp SSCCEEEEEESTTC--SCEEETT----SSEEEEESCSS-----SSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEE
T ss_pred CccEEEEEEeCCCC--CeEEEEC----CCCEEECCCCC-----CCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEE
Confidence 34454444 44443 3788888 56699999987 9999999999999999999999999999999999999
Q ss_pred cCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 014684 362 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 362 ng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
||. ++. +..|++||+|+||.. .|+|...
T Consensus 122 Ng~-----~i~---~~~L~~GD~I~iG~~---~l~f~~~ 149 (162)
T 2kfu_A 122 NRE-----PVD---SAVLANGDEVQIGKF---RLVFLTG 149 (162)
T ss_dssp TTB-----CCS---EEECCSSCEEEETTE---EEEEECS
T ss_pred CCE-----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 999 886 589999999999997 5666654
No 29
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.74 E-value=5e-18 Score=149.06 Aligned_cols=99 Identities=17% Similarity=0.285 Sum_probs=81.3
Q ss_pred EEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEEC---------------CEEEEE
Q 014684 287 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFYLI 351 (420)
Q Consensus 287 ~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~---------------~~~~i~ 351 (420)
.|.|..+.. ..+.+.|. .. ..+++|||.+. |||+++++.|||.||.|.+.+ +.|+|+
T Consensus 7 ~L~p~~~~~-~~~~i~L~-~~-~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~ 78 (158)
T 1dmz_A 7 TLKPLPDSI-IQESLEIQ-QG-VNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYC 78 (158)
T ss_dssp EEEECTTSS-CCCCEEET-TS-CSCEEEESSTT-----SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEE
T ss_pred EEEeCCCCc-cceEEEEc-CC-CceEEECCCCC-----CCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEE
Confidence 355555433 34788888 11 23499999987 999999999999999999876 789999
Q ss_pred EcCCCccceecCCCCceEeecCCCcEEeCCCCEEEE-----CCCceeEEEEEEe
Q 014684 352 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 400 (420)
Q Consensus 352 Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~-----G~~~~~~~~~~~~ 400 (420)
|+ |+|||||||. +|.+++++.|++||+|+| |.. .+.|++...
T Consensus 79 Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~ 125 (158)
T 1dmz_A 79 HT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIN 125 (158)
T ss_dssp EC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTC-CCCEEEECS
T ss_pred EC-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCE-EEEEEEEeC
Confidence 99 9999999999 999888999999999999 887 445666554
No 30
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.73 E-value=4.8e-18 Score=147.87 Aligned_cols=80 Identities=25% Similarity=0.377 Sum_probs=72.6
Q ss_pred cccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCcE
Q 014684 298 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 377 (420)
Q Consensus 298 ~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~ 377 (420)
.+.+.|. ...++|||.++ |||+|+++.|||.||+|.++++.|+|+|++|+|||||||+ ++. +.
T Consensus 77 g~~~~L~----~~~~~IGR~~~-----~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~ 139 (157)
T 3oun_A 77 GRTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 139 (157)
T ss_dssp CCEEECC----SEEEEEESSTT-----CSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CeEEEEC----CCcEEEEeCCC-----CCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eE
Confidence 3889999 55599999987 9999999999999999999999999999999999999998 886 68
Q ss_pred EeCCCCEEEECCCceeEEEE
Q 014684 378 RFRPSDTIEFGSDKKAIFRV 397 (420)
Q Consensus 378 ~L~~Gd~i~~G~~~~~~~~~ 397 (420)
.|++||+|+||.. .|+|
T Consensus 140 ~L~~GD~I~lG~~---~l~f 156 (157)
T 3oun_A 140 QLADGDVIRLGHS---EIIV 156 (157)
T ss_dssp ECCTTCEEEETTE---EEEE
T ss_pred ECCCCCEEEECCE---EEEE
Confidence 9999999999997 4554
No 31
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.73 E-value=1.1e-17 Score=142.23 Aligned_cols=89 Identities=26% Similarity=0.379 Sum_probs=73.5
Q ss_pred EEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE---CC--EEEEEEc-----CC
Q 014684 286 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QS 355 (420)
Q Consensus 286 w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~---~~--~~~i~Dl-----~S 355 (420)
.+|+..++.. .+.+.|. +..++|||.++ |||+++++.|||.||.|.+. ++ .|+|+|+ +|
T Consensus 12 ~~lvv~~~~~--~~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S 80 (131)
T 3hx1_A 12 HILIILDDAG--RREVLLT----ETFYTIGRSPR-----ADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSS 80 (131)
T ss_dssp EEEEEEETTE--EEEEEEC----SSEEEEESSTT-----SSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCC
T ss_pred eEEEEECCCC--cEEEEEC----CCCEEECCCCC-----CCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCC
Confidence 3444444433 4888998 66699999988 99999999999999999986 23 4999999 79
Q ss_pred CccceecCCCCceEeecCCCcEEeCCCCEEEECCCcee
Q 014684 356 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKA 393 (420)
Q Consensus 356 ~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~ 393 (420)
+|||||||. ++.+ ..|++||+|+||....+
T Consensus 81 ~NGT~vNg~-----~i~~---~~L~~GD~I~iG~~~~~ 110 (131)
T 3hx1_A 81 VNGLMINGK-----KVQE---HIIQTGDEIVMGPQVSV 110 (131)
T ss_dssp SSCEEETTE-----EESE---EECCTTCEEECSTTCEE
T ss_pred CCceEECCE-----EeEe---EECCCCCEEEECCEEEE
Confidence 999999999 8873 89999999999998543
No 32
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.71 E-value=4.3e-17 Score=163.00 Aligned_cols=185 Identities=15% Similarity=0.086 Sum_probs=110.8
Q ss_pred CccCcccCCCCcccceE--EEEEEEeCCCCCCcCCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCC-CCCCcccHH
Q 014684 1 MVRKNLFGPQEAIYSGY--TCYTGIADFVPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGG-VDGPEGKKE 77 (420)
Q Consensus 1 ~VR~~l~g~~~~~~sG~--~~~rg~~~~~p~~~~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 77 (420)
.||+++..+..+.|++. .+|+++....+... ....++.++++++.+.|..++..+|++........ ....+...+
T Consensus 164 ~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (394)
T 1k0i_A 164 ISRQSIPAERLKVFERVYPFGWLGLLADTPPVS--HELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSDERFWT 241 (394)
T ss_dssp STGGGSCGGGCEEEEEEEEEEEEEEEESSCCSC--SSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHH
T ss_pred HHHHhcCccccccccccccceeEEEecCCCCCc--cceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCHHHHHH
Confidence 36777754444556664 56777653333221 11222234556655555556666776654332211 111112223
Q ss_pred HHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhh
Q 014684 78 RLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 157 (420)
Q Consensus 78 ~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~ 157 (420)
++.+.|. +.+...+...+......+++.... ..+|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|....
T Consensus 242 ~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~ 317 (394)
T 1k0i_A 242 ELKARLP---SEVAEKLVTGPSLEKSIAPLRSFV-VEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAY 317 (394)
T ss_dssp HHHHTSC---HHHHHHCCCCCEEEEEEEEEEEEE-EECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhC---cccccccccCcceeeEEEEhhhhh-ccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHh
Confidence 3333332 322211111111011233443322 357889999999999999999999999999999999999998764
Q ss_pred hccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 014684 158 KKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMAS 199 (420)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~~~~ 199 (420)
.. +.+.+|+.|+++|++|+..++..++....+..
T Consensus 318 ~~--------~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~ 351 (394)
T 1k0i_A 318 RE--------GRGELLERYSAICLRRIWKAERFSWWMTSVLH 351 (394)
T ss_dssp HH--------CCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cc--------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 22578999999999999999988877665543
No 33
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.71 E-value=1.6e-17 Score=146.81 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=82.7
Q ss_pred CeEEEEEcCCCCcccccEEEeecC--------CCCcEEEcCCCCCCCCcceEEeCCC-cccccceEEEEE-CCEEEEEEc
Q 014684 284 GEWFLVPSGSENVVSQPIYLSVSH--------ENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDL 353 (420)
Q Consensus 284 ~~w~l~~~~~~~~~~~~~~l~~~~--------~~~~~~IGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~~-~~~~~i~Dl 353 (420)
..|.|+...+. ..+..+.|. .. .+..++|||++. |||+|+++ .|||.||.|.+. ++.|+|+|+
T Consensus 32 ~~~~L~v~~G~-~~g~~~~l~-~~~v~~~~~~~~~~~~IGR~~~-----~di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl 104 (164)
T 1g3g_A 32 IVCRVICTTGQ-IPIRDLSAD-ISQVLKEKRSIKKVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI 104 (164)
T ss_dssp CCEEEECSSSS-SCCEEECCC-HHHHHHCSSSCCEEEEEESSSS-----SSEECCCCTTTTSSCEEEEECSTTCEEEEEC
T ss_pred ccEEEEEecCC-CCCeEEEec-cccccccccccCCcEEECCCCC-----CCEEeCCcCCcChhHEEEEECCCCCEEEEEC
Confidence 34666555433 233666666 22 012589999987 99999998 699999999995 899999999
Q ss_pred CCCccceecCCCCceEeecCCCcEEeCCCCEEEECCC---ceeEEEEEEe
Q 014684 354 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD---KKAIFRVKVI 400 (420)
Q Consensus 354 ~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~---~~~~~~~~~~ 400 (420)
|+|||||||. ++.++.++.|++||+|.||.. ..+.|.|...
T Consensus 105 -S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 105 -STNGTWLNGQ-----KVEKNSNQLLSQGDEITVGVGVESDILSLVIFIN 148 (164)
T ss_dssp -CSSCEEETTE-----EECTTEEEECCTTCEEEESCSSTTSCEEEEEEEC
T ss_pred -CCCCeEECCE-----EcCCCCceEcCCCCEEEECCCCCCCcEEEEEEeC
Confidence 9999999999 999888899999999999996 3566777665
No 34
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.71 E-value=7.9e-18 Score=150.82 Aligned_cols=105 Identities=16% Similarity=0.315 Sum_probs=82.5
Q ss_pred cCCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEEC---------------C
Q 014684 282 MNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------G 346 (420)
Q Consensus 282 ~~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~---------------~ 346 (420)
..+.|+.+.........+.|.|. . ...+++|||++. |||+|+++.|||.||.|.+.+ +
T Consensus 25 ~~g~~l~L~~~~~~~~~~~i~L~-~-~~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~ 97 (182)
T 1qu5_A 25 GNGRFLTLKPLPDSIIQESLEIQ-Q-GVNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLD 97 (182)
T ss_dssp SSSCCEEECCCTTSSSCSCCCBT-T-CCSSEEESSSTT-----SSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCC
T ss_pred CCccEEEEEeCCCCCcceEEEEc-C-CCceEEECCCCC-----CCEEECCCCcChHHeEEEEecCccccccccccccccc
Confidence 34456544433333334777777 1 123499999987 999999999999999999987 8
Q ss_pred EEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEE-----CCCceeEEEEEEe
Q 014684 347 AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 400 (420)
Q Consensus 347 ~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~-----G~~~~~~~~~~~~ 400 (420)
.|+|+|+ |+|||||||. +|.++.++.|++||+|+| |.. .+.|++...
T Consensus 98 ~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~ 149 (182)
T 1qu5_A 98 DIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIN 149 (182)
T ss_dssp EEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTE-EEECCEEES
T ss_pred eEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCE-EEEEEEEeC
Confidence 9999998 9999999999 999888999999999999 887 445555543
No 35
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.70 E-value=2.8e-17 Score=172.87 Aligned_cols=163 Identities=18% Similarity=0.113 Sum_probs=108.4
Q ss_pred EcCCeEEEE-EeCCCCeE-EEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCcc-ceeEeeecccCCCCcc
Q 014684 40 LGHKQYFVS-SDVGAGKM-QWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTW 116 (420)
Q Consensus 40 ~g~~~~~~~-~p~~~g~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~-~~~~~~l~~~~~~~~w 116 (420)
+.+.+++++ +|++++.. +|+++.............+.+++.+.+..+.+.... ..... ....|++..+. .++|
T Consensus 244 ~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~-a~~~ 319 (570)
T 3fmw_A 244 RTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLT---LTEPVSWLSRFGDASRQ-AKRY 319 (570)
T ss_dssp CCCSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCC---CCSCCEEEEEECCCCEE-CSCS
T ss_pred ecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccc---cceeeeeeEEeeccccc-cccc
Confidence 456666666 89998877 677655433222223445678888888776442111 11111 23445554443 4689
Q ss_pred cCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 014684 117 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAV 196 (420)
Q Consensus 117 ~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~~ 196 (420)
..|||+|+|||||.|+|+.|||+|+||+||.+|+++|....+. ...+.+|+.|+++|++++..++..++....
T Consensus 320 ~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g-------~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~ 392 (570)
T 3fmw_A 320 RSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRG-------WGSEELLDTYHDERHPVAERVLLNTRAQLA 392 (570)
T ss_dssp EETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987532 234789999999999999999988877655
Q ss_pred HHHHhHhhhcCCCChhhhhhhccC
Q 014684 197 MASTYKAYLGVGLGPLSFLTKFRI 220 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~r~~~~ 220 (420)
++.. ...+...+|+..+
T Consensus 393 l~~~-------~~~~~~~lR~~~~ 409 (570)
T 3fmw_A 393 LMRP-------DEQHTTPLRGFVE 409 (570)
T ss_dssp HSCS-------CTTTHHHHHHHHH
T ss_pred HhcC-------CchHHHHHHHHHH
Confidence 5432 1122567777544
No 36
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.70 E-value=4e-17 Score=174.70 Aligned_cols=145 Identities=19% Similarity=0.216 Sum_probs=99.0
Q ss_pred cCCeEEEEEeCCCCeEEEEEEEeCCC---CCCCCCcccHHHHHHHhcCCChHHHHHHHh-c-CccceeEeeeccc--CCC
Q 014684 41 GHKQYFVSSDVGAGKMQWYAFHKEPA---GGVDGPEGKKERLLKIFEGWCDNVVDLILA-T-DEEAILRRDIYDR--TPI 113 (420)
Q Consensus 41 g~~~~~~~~p~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~li~~-~-~~~~~~~~~l~~~--~~~ 113 (420)
++.++++++|++++.++|++...... ........+.+++.+.+.. ++.. . .-..+..|..|.. ...
T Consensus 272 ~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~r~a 344 (665)
T 1pn0_A 272 AESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKK-------IFHPYTFDVQQLDWFTAYHIGQRVT 344 (665)
T ss_dssp SSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHH-------HHTTSCCEEEEEEEEEEEEEEEEEC
T ss_pred CCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHH-------HhCcccCceeeEEEEEeeeccceeh
Confidence 46788999999998777766543322 1111222345555443321 1110 0 0012233444432 224
Q ss_pred Cccc-CCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhH
Q 014684 114 FTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 192 (420)
Q Consensus 114 ~~w~-~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~ 192 (420)
++|. .|||+|+|||||.|+|+.|||+|+||+||.+|+++|..++++ ...+++|+.|+++|+++++.++..++
T Consensus 345 ~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g-------~a~~~lL~tYe~eR~p~a~~~i~~s~ 417 (665)
T 1pn0_A 345 EKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG-------RAKRDILKTYEEERQPFAQALIDFDH 417 (665)
T ss_dssp SCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT-------CBCGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6898 799999999999999999999999999999999999987642 13467999999999999999999888
Q ss_pred HHHHHHH
Q 014684 193 SAAVMAS 199 (420)
Q Consensus 193 ~~~~~~~ 199 (420)
...+++.
T Consensus 418 ~~~~l~~ 424 (665)
T 1pn0_A 418 QFSRLFS 424 (665)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7776654
No 37
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.70 E-value=4.9e-17 Score=136.28 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=73.3
Q ss_pred cccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCcE
Q 014684 298 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 377 (420)
Q Consensus 298 ~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~ 377 (420)
...+.|. ...++|||.... .|||+|+++.|||+||.|.+.++.|+|+|++|+|||||||+ ++. +++
T Consensus 28 ~~~~~L~----~~~~~IGr~r~~---~~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~~~ 93 (120)
T 1wln_A 28 PKLYRLQ----LSVTEVGTEKFD---DNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--ETT 93 (120)
T ss_dssp CCEEECC----SEEEECSSSCCS---TTCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--SCE
T ss_pred cEEEEEC----CCCEEECCCCCC---CCcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--CCE
Confidence 4778888 555999975221 29999999999999999999999999999999999999999 886 568
Q ss_pred EeCCCCEEEECCCceeEEEEEEe
Q 014684 378 RFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 378 ~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
.|++||+|.||... .|+|...
T Consensus 94 ~L~~GD~I~iG~~~--~~~f~~p 114 (120)
T 1wln_A 94 MLQSGMRLQFGTSH--VFKFVDP 114 (120)
T ss_dssp EECTTCEEEETTTE--EEEEECS
T ss_pred ECCCCCEEEECCce--EEEEECC
Confidence 99999999999952 5666543
No 38
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.69 E-value=1.3e-16 Score=134.98 Aligned_cols=79 Identities=20% Similarity=0.321 Sum_probs=70.7
Q ss_pred cEEEcCCCCCCCCcceEEeCCC-cccccceEEEE-ECCEEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEEC
Q 014684 311 PYLIGSESHEDFSRTSIVIPSA-QVSKMHARISY-KDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 388 (420)
Q Consensus 311 ~~~IGR~~~~~~~~~~i~~~~~-~vSr~Ha~i~~-~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G 388 (420)
.++|||++. |||+++++ .|||.||.|.+ .++.|+|+|+ |+|||||||. ++.+++++.|++||+|+||
T Consensus 37 ~~~IGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~lG 105 (127)
T 1g6g_A 37 VWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITVG 105 (127)
T ss_dssp EEEEESSTT-----SSEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEEC
T ss_pred CEEECCCCC-----CCEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEEC
Confidence 699999998 99999997 69999999999 4889999999 9999999999 9999889999999999999
Q ss_pred CCc---eeEEEEEEe
Q 014684 389 SDK---KAIFRVKVI 400 (420)
Q Consensus 389 ~~~---~~~~~~~~~ 400 (420)
... .+.|.|+..
T Consensus 106 ~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 106 VGVESDILSLVIFIN 120 (127)
T ss_dssp TTSGGGCEEEEEEEC
T ss_pred CCccCceEEEEEEeC
Confidence 963 445666654
No 39
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.65 E-value=1.4e-15 Score=158.68 Aligned_cols=145 Identities=18% Similarity=0.191 Sum_probs=96.0
Q ss_pred EEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHH----HHhcCCChHHHHHHHhcCccceeEeeecccCCC
Q 014684 38 VFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLL----KIFEGWCDNVVDLILATDEEAILRRDIYDRTPI 113 (420)
Q Consensus 38 ~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~ 113 (420)
.++++++..+++|+.++..+.+.+...+.........+.+++. +.+......+ .......|++.... .
T Consensus 224 ~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~-a 295 (535)
T 3ihg_A 224 YLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-------ELVDIQGWEMAARI-A 295 (535)
T ss_dssp EEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-------EEEEEEEEEEEEEE-E
T ss_pred EEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-------eEEEeeEeeeeEEE-E
Confidence 3456788888889987543322222222211111222333333 3333211111 01123445555443 3
Q ss_pred CcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014684 114 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 193 (420)
Q Consensus 114 ~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~ 193 (420)
++|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|..+.+. ...+++|+.|+++|+++++.++..|..
T Consensus 296 ~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g-------~~~~~lL~~Ye~eR~p~a~~~~~~s~~ 368 (535)
T 3ihg_A 296 ERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQG-------QAGAGLLDTYEDERKVAAELVVAEALA 368 (535)
T ss_dssp SCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTT-------SSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcC-------CCcHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999987532 123678999999999999999988876
Q ss_pred HHHH
Q 014684 194 AAVM 197 (420)
Q Consensus 194 ~~~~ 197 (420)
....
T Consensus 369 ~~~~ 372 (535)
T 3ihg_A 369 IYAQ 372 (535)
T ss_dssp HHHH
T ss_pred hhHh
Confidence 5543
No 40
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.65 E-value=2.9e-16 Score=157.60 Aligned_cols=88 Identities=24% Similarity=0.307 Sum_probs=78.8
Q ss_pred ccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceecCCCCceEeecCCCcEE
Q 014684 299 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 378 (420)
Q Consensus 299 ~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~ 378 (420)
+.+.|. +..++|||+++ |||+++++.|||.||.|.++++.|+|+|++|+|||||||. ++. ++..
T Consensus 299 ~~~~l~----~~~~~iGR~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQ----AAATRIGRLHD-----NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEEC----CCCEEEecCCC-----CeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 789998 66699999987 9999999999999999999999999999999999999999 884 5789
Q ss_pred eCCCCEEEECCCceeEEEEEEecCCCC
Q 014684 379 FRPSDTIEFGSDKKAIFRVKVIGTPPN 405 (420)
Q Consensus 379 L~~Gd~i~~G~~~~~~~~~~~~~~~p~ 405 (420)
|++||+|+||+. .|+|......|.
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p~ 386 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTHG 386 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCCC
Confidence 999999999997 777777655543
No 41
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.65 E-value=5.3e-16 Score=162.52 Aligned_cols=145 Identities=15% Similarity=0.089 Sum_probs=93.6
Q ss_pred EEEEcCC-eEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCc
Q 014684 37 RVFLGHK-QYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFT 115 (420)
Q Consensus 37 ~~~~g~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~ 115 (420)
.++++++ ++++++|++++.. |.+....+... ...+...+.+.+.+.. .-. ........|.+..+ ..++
T Consensus 237 ~~~~~p~~~~~~~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~~~~~-~~~-------~~~~~~~~~~~~~~-~a~~ 305 (549)
T 2r0c_A 237 FFLMLSSSLRFPLRALDGRGL-YRLTVGVDDAS-KSTMDSFELVRRAVAF-DTE-------IEVLSDSEWHLTHR-VADS 305 (549)
T ss_dssp EEEEEETTEEEEEEESSSSSE-EEEEEECSTTC-CSCCCHHHHHHHHBCS-CCC-------CEEEEEEEEEECCE-ECSC
T ss_pred EEEECCCCcEEEEEEECCCcE-EEEEecCCCCC-CCHHHHHHHHHHHhCC-CCc-------eeEEEEecchhHhh-hHHh
Confidence 4555776 7888999976443 33333322211 2333445555555543 100 01011234555443 3468
Q ss_pred ccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014684 116 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 195 (420)
Q Consensus 116 w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~~ 195 (420)
|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|..++++ ...+++|+.|+++|+++++.+++.+....
T Consensus 306 ~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g-------~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~ 378 (549)
T 2r0c_A 306 FSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRG-------WAGPGLLATYEEERRPVAITSLEEANVNL 378 (549)
T ss_dssp SEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHT-------CSCTTTTHHHHHHHHHHHHHHHHC-----
T ss_pred hcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987542 12357899999999999999999988766
Q ss_pred HHHH
Q 014684 196 VMAS 199 (420)
Q Consensus 196 ~~~~ 199 (420)
.++.
T Consensus 379 ~~~~ 382 (549)
T 2r0c_A 379 RRTM 382 (549)
T ss_dssp ----
T ss_pred Hhhc
Confidence 5543
No 42
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.62 E-value=1.1e-15 Score=162.93 Aligned_cols=143 Identities=17% Similarity=0.259 Sum_probs=93.8
Q ss_pred CCeEEEEEeCCCC-eEEEEEEEeC--CCCCCCCCcccHHHHHHHhcCCChHHHHHHHh--cCccceeEeeecccC--CCC
Q 014684 42 HKQYFVSSDVGAG-KMQWYAFHKE--PAGGVDGPEGKKERLLKIFEGWCDNVVDLILA--TDEEAILRRDIYDRT--PIF 114 (420)
Q Consensus 42 ~~~~~~~~p~~~g-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~--~~~~~~~~~~l~~~~--~~~ 114 (420)
++++++++|++++ .++|++.... +.........+.+++.+.+. +++.. ..-..+..|.+|... ..+
T Consensus 253 ~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~ 325 (639)
T 2dkh_A 253 EQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQ-------RVLHPYKLEVKNVPWWSVYEIGQRICA 325 (639)
T ss_dssp TTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHH-------HHHTTSCEEEEEEEEEEEECCCCEECS
T ss_pred CCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHH-------HHhCcccCcceeeeEEEecccccchhh
Confidence 7888999999888 5566554322 11111112234555544332 11111 000123344455321 235
Q ss_pred ccc------------CCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHH
Q 014684 115 TWG------------RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRL 182 (420)
Q Consensus 115 ~w~------------~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~ 182 (420)
+|. .|||+|+|||||.|+|+.|||+|+||+||.+|+++|..++++ ...+++|+.|+++|++
T Consensus 326 ~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g-------~a~~~lL~~Ye~eR~~ 398 (639)
T 2dkh_A 326 KYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK-------QCAPELLHTYSSERQV 398 (639)
T ss_dssp CSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT-------SBCGGGGHHHHHHHHH
T ss_pred hhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHHHHHH
Confidence 677 899999999999999999999999999999999999987642 1236799999999999
Q ss_pred HHHHHHHhhHHHHHHH
Q 014684 183 RVAVIHGLARSAAVMA 198 (420)
Q Consensus 183 r~~~~~~~s~~~~~~~ 198 (420)
+++.++..++....++
T Consensus 399 ~a~~~~~~s~~~~~~~ 414 (639)
T 2dkh_A 399 VAQQLIDFDREWAKMF 414 (639)
T ss_dssp HHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999998877655443
No 43
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.59 E-value=5.8e-15 Score=150.80 Aligned_cols=170 Identities=15% Similarity=0.087 Sum_probs=106.6
Q ss_pred ceEEEEEEEeCCCCCCcCCcceEEEEc----CCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHH
Q 014684 15 SGYTCYTGIADFVPADIESVGYRVFLG----HKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNV 90 (420)
Q Consensus 15 sG~~~~rg~~~~~p~~~~~~~~~~~~g----~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 90 (420)
....+|++++.............+|++ +++++.++|..++.+++.+........ ....+.+.+.+..+.+.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~----~~~~~~~~~~l~~~~~~~ 257 (453)
T 3atr_A 182 DADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGY----PSIHEYYKKYLDKYAPDV 257 (453)
T ss_dssp GEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSSCC----CCHHHHHHHHHHHHCTTE
T ss_pred cceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCCCC----CCHHHHHHHHHHhhhhhc
Confidence 446788876543211111122345664 678888999999887776554432211 113333433332211111
Q ss_pred HHHHHhcCccceeEeeecccCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHH
Q 014684 91 VDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIV 170 (420)
Q Consensus 91 ~~li~~~~~~~~~~~~l~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~ 170 (420)
... ... ....+.+....+.++|+.+||+|+|||||.++|+.|||+|+||+||..||++|...+..+. ..+
T Consensus 258 ~~~--~~~--~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~------~~~ 327 (453)
T 3atr_A 258 DKS--KLL--VKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGD------FSA 327 (453)
T ss_dssp EEE--EEE--EEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC------CST
T ss_pred CCC--eEE--eccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCC------ccH
Confidence 000 000 0111222223455789999999999999999999999999999999999999987653210 125
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 014684 171 SALKSYERARRLRVAVIHGLARSAAVMA 198 (420)
Q Consensus 171 ~~l~~y~~~R~~r~~~~~~~s~~~~~~~ 198 (420)
++|+.|+++|++++..++..++...++.
T Consensus 328 ~~L~~Y~~~r~~~~~~~~~~~~~~~~~~ 355 (453)
T 3atr_A 328 SGLWDMNICYVNEYGAKQASLDIFRRFL 355 (453)
T ss_dssp TTTTHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988777666554
No 44
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.57 E-value=6.7e-15 Score=149.49 Aligned_cols=143 Identities=17% Similarity=0.120 Sum_probs=98.6
Q ss_pred EcCCeEEEEEeC--CCCeEEEEEEEeCCCC---CCC------CCcccHHHHHHHhcCCChHHHHHHHhcC------ccce
Q 014684 40 LGHKQYFVSSDV--GAGKMQWYAFHKEPAG---GVD------GPEGKKERLLKIFEGWCDNVVDLILATD------EEAI 102 (420)
Q Consensus 40 ~g~~~~~~~~p~--~~g~~~~~~~~~~~~~---~~~------~~~~~~~~l~~~~~~~~~~~~~li~~~~------~~~~ 102 (420)
+.+.+.+..+|. .+|..+++++...+.. .+. .++...+++++.|.+|.+.+.+++.... +..+
T Consensus 209 ~~~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 288 (430)
T 3ihm_A 209 SPGHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDI 288 (430)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSE
T ss_pred cCCCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccce
Confidence 344566666665 3455555554444421 111 1222345778888899998887776544 1122
Q ss_pred ---eEeeecccCCCCcccCCCEEE-EcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHH
Q 014684 103 ---LRRDIYDRTPIFTWGRGRVTL-LGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYER 178 (420)
Q Consensus 103 ---~~~~l~~~~~~~~w~~grv~L-iGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~ 178 (420)
..|+++. .+..+|..||++| +|||||.|+|+.|||+|+||+||.+|+++|... .+++++|..|+.
T Consensus 289 ~~~~~~~~~~-~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~----------~~~~~~~~~~~~ 357 (430)
T 3ihm_A 289 LQGGVVPAFR-DGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH----------SVYDLRFSEHLE 357 (430)
T ss_dssp EEECCCCEEB-CSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC----------SCCSHHHHHHHH
T ss_pred eecceeeccc-ccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc----------CCHHHHHHHHHH
Confidence 2344433 3457899999999 999999999999999999999999999999874 236789999999
Q ss_pred HHH-HHHHHHHHhhHH
Q 014684 179 ARR-LRVAVIHGLARS 193 (420)
Q Consensus 179 ~R~-~r~~~~~~~s~~ 193 (420)
+|+ +++..++..++.
T Consensus 358 ~r~~~~~~~~~~~~~~ 373 (430)
T 3ihm_A 358 RRRQDRVLCATRWTNF 373 (430)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 998 777766654443
No 45
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.57 E-value=2.7e-14 Score=148.18 Aligned_cols=182 Identities=12% Similarity=0.088 Sum_probs=118.1
Q ss_pred ccCcccCC-CCcccceEEEEEEEeCC---CCCCcCCcceEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHH
Q 014684 2 VRKNLFGP-QEAIYSGYTCYTGIADF---VPADIESVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKE 77 (420)
Q Consensus 2 VR~~l~g~-~~~~~sG~~~~rg~~~~---~p~~~~~~~~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~ 77 (420)
+|+.+ +. ....+.+..++++++.. .+.. .......++.+++++..+|+.++..++.+......... .. ...+
T Consensus 174 vr~~l-g~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~-~~-~~~~ 249 (512)
T 3e1t_A 174 VSQAV-GERVYSRFFQNVALYGYFENGKRLPAP-RQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEA-IK-DGHE 249 (512)
T ss_dssp SGGGT-CCEEECSTTCEEEEEEEEESCCCCSTT-CTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTT-TS-SCHH
T ss_pred HHHHc-CCCccCchhcceEEEEEecCCccCCCC-CcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhh-hc-CCHH
Confidence 56666 43 22345567777776542 1211 12223445667889999999999877766544321111 11 2233
Q ss_pred HHHHHhcCCChHHHHHHHhcCcc---ceeEeeeccc--CCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHH
Q 014684 78 RLLKIFEGWCDNVVDLILATDEE---AILRRDIYDR--TPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVE 152 (420)
Q Consensus 78 ~l~~~~~~~~~~~~~li~~~~~~---~~~~~~l~~~--~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~ 152 (420)
+..+.+..+.|.+.+++...... .+...++... ...++|..+||+|||||||.|+|+.|||+|+||+||..|+++
T Consensus 250 ~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~ 329 (512)
T 3e1t_A 250 AALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARA 329 (512)
T ss_dssp HHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHH
Confidence 44444545778888877554210 0000111111 023567889999999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014684 153 LEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 193 (420)
Q Consensus 153 L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~ 193 (420)
|...... ..+...+|+.|++.|+++...+.++...
T Consensus 330 L~~~l~~------~~~~~~aL~~Ye~~~~~~~~~~~~~~~~ 364 (512)
T 3e1t_A 330 INTCLAG------EMSEQRCFEEFERRYRREYGNFYQFLVA 364 (512)
T ss_dssp HHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9886432 2457899999999999999988766553
No 46
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.56 E-value=1.9e-14 Score=120.54 Aligned_cols=72 Identities=26% Similarity=0.440 Sum_probs=64.4
Q ss_pred EEEcCCCCCCCCcceEEeCCCcccccceEEEEE-CCEEEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCC
Q 014684 312 YLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 390 (420)
Q Consensus 312 ~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~-~~~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~ 390 (420)
++|||.++ |||+|+++.||++||.|... ++.++|+|++ +|||||||+ ++. +++.|++||+|.||..
T Consensus 50 t~IGR~~~-----~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG~-----~V~--~~~~L~~GD~I~lG~~ 116 (124)
T 3fm8_A 50 TLIGSANS-----QDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNGS-----SVS--SPIQLHHGDRILWGNN 116 (124)
T ss_dssp EEEESSTT-----CSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETTE-----ECC--SCEEECTTCEEEETTT
T ss_pred eEECCCCC-----CCEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECCE-----EcC--CcEECCCCCEEEECCC
Confidence 89999987 99999999999999999984 8889999996 799999999 886 4789999999999987
Q ss_pred ceeEEEEE
Q 014684 391 KKAIFRVK 398 (420)
Q Consensus 391 ~~~~~~~~ 398 (420)
. .|+|.
T Consensus 117 ~--~FrFn 122 (124)
T 3fm8_A 117 H--FFRLN 122 (124)
T ss_dssp E--EEEEE
T ss_pred e--EEEEE
Confidence 3 46664
No 47
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.56 E-value=9.8e-15 Score=127.41 Aligned_cols=85 Identities=22% Similarity=0.373 Sum_probs=70.0
Q ss_pred EEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECC----EEEEEEcCCCccceecCCCCceEeecCCCc
Q 014684 301 IYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 376 (420)
Q Consensus 301 ~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~----~~~i~Dl~S~nGt~vng~~~~~~~l~~~~~ 376 (420)
+.|. .+.++|||.+.. ..|||+|+++.||++||.|.++++ .+++.|++|+|||||||. +|. ++
T Consensus 56 y~L~----~g~t~IGR~~~~--~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~VNG~-----~i~--~~ 122 (154)
T 4ejq_A 56 YYIK----DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGK-----KVT--EP 122 (154)
T ss_dssp EECC----SEEEEEECSSCS--SCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEETTE-----ECC--SC
T ss_pred EEeC----CCCEEEcCCCCC--CCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEECCE-----EcC--Cc
Confidence 4555 455999998642 239999999999999999999853 589999999999999999 885 47
Q ss_pred EEeCCCCEEEECCCceeEEEEEEe
Q 014684 377 ARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 377 ~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
+.|++||+|.||... .|+|..+
T Consensus 123 ~~L~~GD~I~~G~~~--~Frf~~P 144 (154)
T 4ejq_A 123 SILRSGNRIIMGKSH--VFRFNHP 144 (154)
T ss_dssp EECCTTCEEEETTTE--EEEEECH
T ss_pred eECCCCCEEEECCcE--EEEEcCh
Confidence 899999999999873 4777643
No 48
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.54 E-value=2e-14 Score=136.63 Aligned_cols=100 Identities=23% Similarity=0.351 Sum_probs=77.7
Q ss_pred EEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE-----------CCEEEEEEcC
Q 014684 286 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-----------DGAFYLIDLQ 354 (420)
Q Consensus 286 w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~-----------~~~~~i~Dl~ 354 (420)
|+|.+.++.. .++.+.|. .++ ++|||...++ .+.|+++|++|||+||+|.+. ...++|+||+
T Consensus 2 WiL~~~~d~~-~Gkr~~L~-pg~---YlIGR~~~~~--~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLg 74 (325)
T 3huf_A 2 WIIEAEGDIL-KGKSRILF-PGT---YIVGRNVSDD--SSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLD 74 (325)
T ss_dssp EEEEESTTTT-TTCCEEEC-SEE---EEEESSCCCB--TTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECS
T ss_pred cEEeccCccC-CCeEEEec-CCe---EEECCCCCcc--CceeecCCCCccccceEEEEecccccccccCCcceEEEEECC
Confidence 9999976432 34889898 444 9999998632 135699999999999999886 2479999999
Q ss_pred CCccceecCCCCceEeecCCCcEEe-CCCCEEEECCCceeEEEEEE
Q 014684 355 SEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 355 S~nGt~vng~~~~~~~l~~~~~~~L-~~Gd~i~~G~~~~~~~~~~~ 399 (420)
|+|||||||+ ++.+. ...| ++||+|+||.... .|+++-
T Consensus 75 SknGTfVNGe-----rI~~~-~~~L~~dgd~I~fG~~~~-~fRl~W 113 (325)
T 3huf_A 75 TKFGTKVNEK-----VVGQN-GDSYKEKDLKIQLGKCPF-TINAYW 113 (325)
T ss_dssp CSSCEEETTE-----ECCTT-CEEECSSEEEEEETTCSS-CEEEEE
T ss_pred CCCCEEECCE-----ECCCc-eeeecCCCCEEEecCCcc-eEEEEE
Confidence 9999999999 99754 4555 5799999999732 455543
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.43 E-value=2.5e-12 Score=127.06 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=87.0
Q ss_pred eEEEEc---CCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCC
Q 014684 36 YRVFLG---HKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTP 112 (420)
Q Consensus 36 ~~~~~g---~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~ 112 (420)
..++++ +++++..+|..++..++.+....+.. .......+.+.+.+.. .+.+. ...........+.....
T Consensus 198 ~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~--~~~~~~~~~l~~~~~~-~~~l~----~~~~~~~~~~~~~~~~~ 270 (397)
T 3oz2_A 198 TDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--HNRFELKNYLDRFIEN-HPGLK----KGQDIQLVTGGVSVSKV 270 (397)
T ss_dssp EEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTS--CSHHHHHHHHHHHHHT-CHHHH----TSEEEEEEEEEEECCCC
T ss_pred ceeeeeccCCCceEEEeecccceeEEEEeeccchh--hhhhhHHHHHHHHHHh-Ccccc----ccceeeeeeccccccCc
Confidence 345554 67788888888887665544333211 1111122223333332 33322 11111112222222222
Q ss_pred CCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 014684 113 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIH 188 (420)
Q Consensus 113 ~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~ 188 (420)
..+|..+||+|+|||||.++|+.|||+|+||+||..||++|.++++.+ +..+.+|+.|++.++.+..+-.
T Consensus 271 ~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~------~~~~~~L~~Ye~~~~~~~~~~~ 340 (397)
T 3oz2_A 271 KMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKH 340 (397)
T ss_dssp CSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHH
Confidence 246788999999999999999999999999999999999999876542 1237899999999888765544
No 50
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=4.8e-12 Score=125.73 Aligned_cols=149 Identities=15% Similarity=0.032 Sum_probs=99.0
Q ss_pred ceEEEE---cCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccc--eeEeeecc
Q 014684 35 GYRVFL---GHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEA--ILRRDIYD 109 (420)
Q Consensus 35 ~~~~~~---g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~--~~~~~l~~ 109 (420)
...+++ .+++++..+|..+++.++.+....... .......+.+.+.+. +.+.+. ...... ...+++.
T Consensus 197 ~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~l~~~~~-~~~~~~----~~~~~~~~~~~~p~~- 268 (397)
T 3cgv_A 197 YTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--HNRFELKNYLDRFIE-NHPGLK----KGQDIQLVTGGVSVS- 268 (397)
T ss_dssp EEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--SCHHHHHHHHHHHHH-TCHHHH----TSEEEEEEEEEEECC-
T ss_pred cEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--cCCCCHHHHHHHHHH-hCcCCC----CCeEEeeeeeeeecC-
Confidence 345555 477889999999988776655443321 111222333333333 333322 111001 1122322
Q ss_pred cCCCCcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 014684 110 RTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHG 189 (420)
Q Consensus 110 ~~~~~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~ 189 (420)
.+.++|..+|++|+|||||.++|+.|||+|+|++||..|+++|.+....+ ...+.+|+.|++.|+++....+.
T Consensus 269 -~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~------~~~~~~l~~Y~~~~~~~~~~~~~ 341 (397)
T 3cgv_A 269 -KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHL 341 (397)
T ss_dssp -CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHH
Confidence 33467889999999999999999999999999999999999998865331 22478999999999999988887
Q ss_pred hhHHHHHHH
Q 014684 190 LARSAAVMA 198 (420)
Q Consensus 190 ~s~~~~~~~ 198 (420)
.++...+++
T Consensus 342 ~~~~~~~~~ 350 (397)
T 3cgv_A 342 RNWVAKEKL 350 (397)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766554
No 51
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.38 E-value=2.1e-12 Score=136.26 Aligned_cols=152 Identities=11% Similarity=0.089 Sum_probs=106.5
Q ss_pred eEEEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCc-cceeEeeecccCCCC
Q 014684 36 YRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDE-EAILRRDIYDRTPIF 114 (420)
Q Consensus 36 ~~~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~-~~~~~~~l~~~~~~~ 114 (420)
....+.+.+++..+|+.++.+++.+....+... .......+++.+.+..+.+.+.+.+..... .....++.+.. ...
T Consensus 226 ~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~-~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~-~~~ 303 (591)
T 3i3l_A 226 TYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA-EVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY-DTE 303 (591)
T ss_dssp EEEEEETTEEEEEEECSSSEEEEEEEEEGGGHH-HHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE-EES
T ss_pred eEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh-hhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEeccccc-chh
Confidence 345566889999999998877766554332110 011123455666666777888777754321 11122222221 225
Q ss_pred cccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 014684 115 TWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSA 194 (420)
Q Consensus 115 ~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~~ 194 (420)
+|..+||+|||||||.|+|+.|||+|+|++||..||++|...... ....+.+++.|++.|+++...+.++....
T Consensus 304 ~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~------~~~~~~al~~Y~~~~~~~~~~i~~~~~~~ 377 (591)
T 3i3l_A 304 VFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRH------GDEKDAVHAWYNRTYREAYEQYHQFLASF 377 (591)
T ss_dssp CSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHC------GGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhC------CchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999886532 34567899999999999999998776644
Q ss_pred H
Q 014684 195 A 195 (420)
Q Consensus 195 ~ 195 (420)
.
T Consensus 378 Y 378 (591)
T 3i3l_A 378 Y 378 (591)
T ss_dssp H
T ss_pred H
Confidence 3
No 52
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.37 E-value=3.2e-12 Score=134.77 Aligned_cols=134 Identities=10% Similarity=-0.079 Sum_probs=87.8
Q ss_pred EEEEeCC--CCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEe---eec--ccCCCCcccC
Q 014684 46 FVSSDVG--AGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRR---DIY--DRTPIFTWGR 118 (420)
Q Consensus 46 ~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~---~l~--~~~~~~~w~~ 118 (420)
...||.. ++.+++.+.......... ....+++.+... .|.+.++++... +..+ .++ .....++|+.
T Consensus 274 ~~~~~~~~~~~~~~vg~~~~~~~~~~~--~~~~~~l~~~~~--~p~i~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 274 SFLYHLNEGEPLLALGFVVGLDYQNPY--LSPFREFQRWKH--HPSIKPTLEGGK---RIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp EEEEECCSSSCEEEEEEEEETTCCCTT--CCHHHHHHHHTT--STTTHHHHTTCE---EEEEEEEEEECCGGGGCCCCEE
T ss_pred eEEEEecCCCCeEEEEEEEecCccccc--CChHHHHHHHHh--ChHHHHHhCCCe---EEEecceEccCCCcccCCcccc
Confidence 4566877 677777665544322111 123455555433 466777775432 2222 122 2234568999
Q ss_pred CCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHH---HHHHHHHHHHH-HHHHHHhh
Q 014684 119 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSA---LKSYERARRLR-VAVIHGLA 191 (420)
Q Consensus 119 grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~---l~~y~~~R~~r-~~~~~~~s 191 (420)
+||+|+|||||.|+|+.|||+|+||+||..||++|..++..+. ...+++ |+.|+++|+++ +.+.+..+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~-----~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~ 418 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSEN-----LQSKTIGLHVTEYEDNLKNSWVWKELYSV 418 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCC-----CCCSSSSCCCTHHHHHHHTSHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCC-----cchhhhhhhHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999999999999999988753210 012343 89999999987 55554433
No 53
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.34 E-value=3.9e-12 Score=105.11 Aligned_cols=96 Identities=16% Similarity=0.291 Sum_probs=80.5
Q ss_pred CeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCC-CCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccceec
Q 014684 284 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 362 (420)
Q Consensus 284 ~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~-~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 362 (420)
+.|-|....+.. .+..+.|. .+.++||.++ . |||+|.|+.||+.||.|.+.++.|+|+ +|+||||+|
T Consensus 3 ~~~klrvlsG~~-~G~~l~L~----~~~~~IGs~~~~-----~DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGKH-RGVEVELP----HGRCVFGSDPLQ-----SDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGGG-TTCEEEEC----SEEEEEESCTTT-----CSEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCCC-CCcEEEcC----CCcEEECCCCCC-----CCEEEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 567666655443 45889999 6669999998 7 999999999999999999999999998 699999999
Q ss_pred CCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEEec
Q 014684 363 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG 401 (420)
Q Consensus 363 g~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~~~ 401 (420)
|. ++..+ ..|.+|+.|++|.. .|+|....
T Consensus 71 G~-----~v~~~--~~L~~g~~l~lG~~---~l~~~~~~ 99 (123)
T 4a0e_A 71 GL-----PVPLG--TLLRAGSCLEVGFL---LWTFVAVG 99 (123)
T ss_dssp TE-----ECCTT--CBCCTTSCEEETTE---EEEEEETT
T ss_pred CE-----Ecccc--cccCCCCEEEEccE---EEEEEcCC
Confidence 98 77644 38999999999998 67766543
No 54
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.32 E-value=1.1e-11 Score=99.59 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=75.2
Q ss_pred eEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--CCEEEEEEcCCCccceec
Q 014684 285 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVT 362 (420)
Q Consensus 285 ~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn 362 (420)
.-+|++..+.. ..|.|+ .+ ..++|||++. + .+.|..+||+|+.|..+ ++.+.|++++ +|+|+||
T Consensus 4 ~c~L~~~~~~~---~~I~L~-~g--~~v~iGR~p~-----t--~I~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vn 69 (102)
T 3kt9_A 4 VCWLVRQDSRH---QRIRLP-HL--EAVVIGRGPE-----T--KITDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSID 69 (102)
T ss_dssp EEEEEETTSTT---CEEECC-BT--CEEEECSSTT-----T--CCCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEET
T ss_pred eEEEEecCCCC---CcEEcC-CC--CcEEeccCCc-----c--ccccCcccCcceEEEEecCCCEEEEEECc-CCCCeEC
Confidence 34666766442 789998 43 3456899998 4 44699999999999998 5678999986 8999999
Q ss_pred CCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 014684 363 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 363 g~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~ 399 (420)
|. ++.+++.+.|++||+|.+-.. .|.|++
T Consensus 70 g~-----~l~k~~~~~L~~GD~l~Ll~~---~~~~~v 98 (102)
T 3kt9_A 70 SV-----VIGKDQEVKLQPGQVLHMVNE---LYPYIV 98 (102)
T ss_dssp TE-----ECCBTCEEEECTTCCEEEETT---EEEEEE
T ss_pred CE-----EcCCCCeEEeCCCCEEEEccC---CceEEE
Confidence 99 999999999999999999998 444444
No 55
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.27 E-value=6.5e-12 Score=98.95 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=58.1
Q ss_pred CCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEECCEEEEEEcCCCccc-eecCCCCceEeecCCCcEEeCCCCE---
Q 014684 309 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFRPSDT--- 384 (420)
Q Consensus 309 ~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt-~vng~~~~~~~l~~~~~~~L~~Gd~--- 384 (420)
...+.|||.+. |++++++++||+.||.|.+.+...++.- |+||| ||||+ ++ .+..|.+||.
T Consensus 20 ~~~~rIGR~~~-----~~l~LddpsVs~~HAti~~~~~G~~~l~--S~nGtVFVNGq-----rv---~~~~I~~gDtI~g 84 (102)
T 3uv0_A 20 DTIYRIGRQKG-----LEISIADESMELAHATACILRRGVVRLA--ALVGKIFVNDQ-----EE---TVVDIGMENAVAG 84 (102)
T ss_dssp TCCEEEESSTT-----STEECCCTTSCTTCEEEEEEETTEEEEE--ESSSCEEETTE-----EE---SEEEECGGGCBTT
T ss_pred CcEEEEcCCCC-----CcEEECCcccccceEEEEecCCceEEEE--eccCcEEECCE-----Ee---eeEEccCCccccc
Confidence 56689999987 8999999999999999988765555532 99995 99999 88 4799999999
Q ss_pred ---EEECCC
Q 014684 385 ---IEFGSD 390 (420)
Q Consensus 385 ---i~~G~~ 390 (420)
++||+.
T Consensus 85 ~v~lrFGnv 93 (102)
T 3uv0_A 85 KVKLRFGNV 93 (102)
T ss_dssp EEEEEETTE
T ss_pred EEEEEecCE
Confidence 899998
No 56
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.26 E-value=1.7e-11 Score=127.51 Aligned_cols=132 Identities=8% Similarity=-0.045 Sum_probs=89.5
Q ss_pred EEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccC
Q 014684 39 FLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR 118 (420)
Q Consensus 39 ~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~ 118 (420)
.+.+.+++..+|++++..+.+++. +.. ...+...+.+.+.+..+.+. +.... ...+++.... ..+|..
T Consensus 277 ~~~~~g~~~~~pl~~~~~~~~v~~--~~~--~~~~~~~~~l~~~l~~~~~~----l~~~~---~~~~~~~~~~-~~~~~~ 344 (526)
T 2pyx_A 277 TAQPNGWIWDIGLPTRKGVGYVYS--SSH--TNDIDAQKTLFNYLGVDGAA----ADKLE---PRQLAINPGY-RAKCWQ 344 (526)
T ss_dssp EEETTEEEEEEECSSEEEEEEEEC--TTT--CCHHHHHHHHHHHHTCCHHH----HHHCC---CEEEECCCEE-ESCSEE
T ss_pred EecCCCeEEEeeCCCceEEEEEec--CCC--CChHHHHHHHHHHHHhcCcc----cccCC---ceEEecccCc-cccccC
Confidence 345677888889887543333222 111 11223455667777766333 22222 2233443322 246778
Q ss_pred CCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 014684 119 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 191 (420)
Q Consensus 119 grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s 191 (420)
|||+|+|||||.++|+.|||+|+||+||..|+++|... ....+.+|+.|+++|+++.+.+.+..
T Consensus 345 grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~---------~~~~~~~l~~Y~~~~~~~~~~~~~~~ 408 (526)
T 2pyx_A 345 NNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN---------RMVMDTISARVNERYQQHWQQIIDFL 408 (526)
T ss_dssp TTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC---------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc---------CCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988521 23567899999999999998887544
No 57
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.20 E-value=2.5e-11 Score=122.57 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=78.2
Q ss_pred CCeE-EEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcc---------cccceEEEEE--CC---E
Q 014684 283 NGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG---A 347 (420)
Q Consensus 283 ~~~w-~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~v---------Sr~Ha~i~~~--~~---~ 347 (420)
...| .|++...+. ..+.|. .+.++|||+++ ||++++++.| ||+||.|.+. .+ .
T Consensus 7 ~~~~g~l~~~~~~~---~~~~l~----~~~~~iGR~~~-----~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~ 74 (419)
T 3i6u_A 7 PAPWARLWALQDGF---ANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYI 74 (419)
T ss_dssp CCCSEEEEECSSSS---CCEEEC----SSEEEEESSTT-----SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEEC
T ss_pred CCCceEeeecCCCC---CceEec----CCCEEecCCCc-----cCEEECCcccccccccccccccceEEEEEcCCCCceE
Confidence 3357 444444332 678898 55699999987 9999999865 9999999765 22 2
Q ss_pred EEEEEcCCCccceecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 014684 348 FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 398 (420)
Q Consensus 348 ~~i~Dl~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~ 398 (420)
|+|+| .|+||||||+. ++.++....|.+||.|.||.+....|.+.
T Consensus 75 ~~i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~~~~ 119 (419)
T 3i6u_A 75 AYIED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFF 119 (419)
T ss_dssp CEEEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEE
T ss_pred EEEEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceEEEe
Confidence 99999 89999999999 99999999999999999999865555554
No 58
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.18 E-value=1.6e-10 Score=93.83 Aligned_cols=98 Identities=12% Similarity=0.223 Sum_probs=74.2
Q ss_pred CCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--CCEEEEEEcCCCccce
Q 014684 283 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTY 360 (420)
Q Consensus 283 ~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~ 360 (420)
+..-+|++..+.. ..|.|+ +. .+.++|||+++ ..+.|..+||+|+.|..+ ++.+.|++++ +|+++
T Consensus 7 ~~~c~L~~~~~~~---~~I~Lp-~~-~g~~viGR~p~-------t~I~DkrcSR~hv~L~ad~~~~~v~vk~lG-~Np~~ 73 (110)
T 2brf_A 7 PGRLWLESPPGEA---PPIFLP-SD-GQALVLGRGPL-------TQVTDRKCSRTQVELVADPETRTVAVKQLG-VNPST 73 (110)
T ss_dssp -CEEEEECSTTSS---CCEECC-ST-TCCEEECSBTT-------TTBCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCE
T ss_pred CcEEEEEeCCCCC---CcEEec-cC-CCCEEEcCCCC-------cccccccceeeeEEEEEecCCCEEEEEEcc-cCCcE
Confidence 4445666665442 578883 11 35599999997 246799999999999876 6889999975 69999
Q ss_pred ecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 014684 361 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 361 vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~ 399 (420)
+||. ++.+++.+.|++||+|.|=.. ...|++..
T Consensus 74 vng~-----~l~k~~~~~L~~GD~leLl~g-~y~~~v~f 106 (110)
T 2brf_A 74 TGTQ-----ELKPGLEGSLGVGDTLYLVNG-LHPLTLRW 106 (110)
T ss_dssp EC-C-----BCCTTCEEEEETTCEEEEETT-EEEEEEEE
T ss_pred ECCE-----EcCCCCEEEecCCCEEEEccC-CeEEEEEe
Confidence 9999 999999999999999999776 22344443
No 59
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.17 E-value=2e-10 Score=115.22 Aligned_cols=136 Identities=11% Similarity=0.050 Sum_probs=91.1
Q ss_pred CCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCcc-ceeEeeecccCCCCcccCCC
Q 014684 42 HKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGR 120 (420)
Q Consensus 42 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~-~~~~~~l~~~~~~~~w~~gr 120 (420)
+.+++..+|.++++..+.+....+... . .....+++.+.+..+.|.+.+.+...... .+..++.+... ..+|..++
T Consensus 213 ~~g~~~~~P~~~~~~~vg~~~~~~~~~-~-~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~ 289 (421)
T 3nix_A 213 PKVWIWVIPFSNGNTSVGFVGEPSYFD-E-YTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAIS-ASKLYGDG 289 (421)
T ss_dssp TTEEEEEEECTTSEEEEEEEECHHHHT-T-SCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBE-ESCSEETT
T ss_pred CCEEEEEEEECCCCEEEEEEecHHHhh-h-cCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeeccccee-eeeeccCC
Confidence 677888999999987765544322111 1 11234444444545667777777554321 23334444332 35688899
Q ss_pred EEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 014684 121 VTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIH 188 (420)
Q Consensus 121 v~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~ 188 (420)
++|+|||||.++|+.|||+|+|++||..|+++|.+..... . ...++.|++.++.....+.
T Consensus 290 v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~-----~---~~~~~~y~~~~~~~~~~~~ 349 (421)
T 3nix_A 290 FVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGE-----E---VNWEKDFVEHMMQGIDTFR 349 (421)
T ss_dssp EEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTC-----C---CCHHHHTHHHHHHHHHHHH
T ss_pred EEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCC-----c---hhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998865321 1 1367788888877665443
No 60
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.14 E-value=8.3e-11 Score=122.60 Aligned_cols=127 Identities=9% Similarity=-0.036 Sum_probs=84.1
Q ss_pred EEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCcccC
Q 014684 39 FLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR 118 (420)
Q Consensus 39 ~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~~ 118 (420)
.+.+.+++..+|++++....+++ . .. ....+...+.+.+.+... + + .. ...+++.... .++|..
T Consensus 266 ~~~~~g~~~~~p~~~~~~~g~v~-~-~~--~~~~~~~~~~l~~~~~~~-~-~------~~---~~~~~~~~~~-~~~~~~ 329 (538)
T 2aqj_A 266 IAMNSGWTWKIPMLGRFGSGYVF-S-SH--FTSRDQATADFLKLWGLS-D-N------QP---LNQIKFRVGR-NKRAWV 329 (538)
T ss_dssp EECSSEEEEEEEETTEEEEEEEE-C-TT--TSCHHHHHHHHHHHHTCC-T-T------CC---CEEEECCCEE-ESCSEE
T ss_pred eecCCceEEEecCCCceEEEEEE-c-CC--CCChHHHHHHHHHHhcCC-C-C------CC---ceEEeecccc-cccccc
Confidence 45677888888988753332222 1 11 111223344555555542 1 1 11 1223333222 246778
Q ss_pred CCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhh
Q 014684 119 GRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 191 (420)
Q Consensus 119 grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s 191 (420)
|||+|+|||||.|+|+.|||+|+||+||..|+++|.. ....+.+|+.|+++|+++.+.+.+..
T Consensus 330 grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~----------~~~~~~~l~~Y~~~~~~~~~~~~~~~ 392 (538)
T 2aqj_A 330 NNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD----------TSFDPRLSDAFNAEIVHMFDDCRDFV 392 (538)
T ss_dssp TTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB----------TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988852 12347899999999999988876533
No 61
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.14 E-value=3.6e-10 Score=116.82 Aligned_cols=131 Identities=8% Similarity=-0.119 Sum_probs=84.1
Q ss_pred EEEcCCeEEEEEeCCCCeEEEEEEEeCCCCCCCCCcccHHHHHHHhcCCChHHHHHHHhcCccceeEeeecccCCCCccc
Q 014684 38 VFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWG 117 (420)
Q Consensus 38 ~~~g~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~w~ 117 (420)
..+.+++++..+|+.+ +..+.+... +. ....+...+.+.+.+ ++.+.+ .. ....+++... .++|.
T Consensus 272 ~~~~~~g~~~~~P~~~-~~~~g~~~~-~~--~~~~~~~~~~l~~~~-~~~~~~------~~---~~~~~~~~~~-~~~~~ 336 (511)
T 2weu_A 272 ATAMSAGWMWTIPLFK-RDGNGYVYS-DE--FISPEEAERELRSTV-APGRDD------LE---ANHIQMRIGR-NERTW 336 (511)
T ss_dssp EEEETTEEEEEEECSS-EEEEEEEEC-TT--TSCHHHHHHHHHHHH-CTTCTT------SC---CEEEECCCEE-ESCSE
T ss_pred ceecCCCcEEEEECCC-ceEEEEEEC-CC--CCCHHHHHHHHHHHh-Cccccc------cc---ceeEEeeccc-ccccc
Confidence 4456778888899887 333222222 11 111222234444444 332221 11 1112222211 24566
Q ss_pred CCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014684 118 RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 193 (420)
Q Consensus 118 ~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~ 193 (420)
.|||+|||||||.++|+.|||+|+|++||..|+++|.. ....+.+|+.|++.|+++.+.+.+....
T Consensus 337 ~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 337 INNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----------ERWDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----------TTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999852 1234789999999999999888765443
No 62
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=99.03 E-value=1.5e-09 Score=91.17 Aligned_cols=98 Identities=11% Similarity=0.201 Sum_probs=75.4
Q ss_pred CCeEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--CCEEEEEEcCCCccce
Q 014684 283 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTY 360 (420)
Q Consensus 283 ~~~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~ 360 (420)
.+.-+|++..+.. ..|.|. +. .+.++|||++. ..|.|..+||+|+.|..+ ++.+.|++++ +|+|+
T Consensus 7 ~~~c~L~p~d~~~---~~I~Lp-~~-~g~vvIGRgPe-------t~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~ 73 (143)
T 1yj5_C 7 RGRLWLQSPTGGP---PPIFLP-SD-GQALVLGRGPL-------TQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPST 73 (143)
T ss_dssp CEEEEEECCTTSC---CCEECC-TT-TCEEEECSBTT-------TTBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCE
T ss_pred CCeEEEEecCCCC---CcEEec-cC-CCCEEEcCCCc-------cccccccccceeEEEEEecCCCeEEEEEcc-cCCcE
Confidence 3445666766442 577773 11 45699999997 357799999999999887 6889999985 69999
Q ss_pred ecCCCCceEeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 014684 361 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 399 (420)
Q Consensus 361 vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~~~~~~~~~~ 399 (420)
|||. +|.++..+.|++||+|.|=... ..|++..
T Consensus 74 vng~-----~L~k~~~~~L~~GD~LeLl~g~-y~f~V~f 106 (143)
T 1yj5_C 74 VGVH-----ELKPGLSGSLSLGDVLYLVNGL-YPLTLRW 106 (143)
T ss_dssp ETTE-----ECCTTCEEEECTTCEEESSSSC-SEEEEEE
T ss_pred ECCE-----EecCCCEEEecCCCEEEEecCC-ceEEEEe
Confidence 9998 9999999999999999976652 2444444
No 63
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.02 E-value=2.5e-10 Score=93.71 Aligned_cols=88 Identities=11% Similarity=0.216 Sum_probs=70.7
Q ss_pred eEEEEEcCCCCcccccEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--CCEEEEEEcCCCccceec
Q 014684 285 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVT 362 (420)
Q Consensus 285 ~w~l~~~~~~~~~~~~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn 362 (420)
.-+|++..+.. ..|.|+ . ..+.++|||+++ ..+.|..+||+|+.|..+ ++.+.|++++ +|+|+||
T Consensus 16 ~c~L~~~~~~~---~~I~Lp-~-~~g~~viGRgp~-------t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vn 82 (119)
T 1ujx_A 16 RLWLQSPTGGP---PPIFLP-S-DGQALVLGRGPL-------TQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVG 82 (119)
T ss_dssp CEEEECCSSSC---CCCCCC-T-TSCCEEESBBTT-------TTBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSS
T ss_pred eEEEEeCCCCC---CcEEec-c-CCCCEEEcCCCC-------cccccccccceeEEEEEecCCCEEEEEEcc-cCCcEEC
Confidence 34666665432 466663 1 135699999997 356799999999999887 6889999985 6999999
Q ss_pred CCCCceEeecCCCcEEeCCCCEEEECCC
Q 014684 363 DNEGRRYRVSSNFPARFRPSDTIEFGSD 390 (420)
Q Consensus 363 g~~~~~~~l~~~~~~~L~~Gd~i~~G~~ 390 (420)
|. +|.+++.+.|++||+|.|=..
T Consensus 83 g~-----~l~k~~~~~L~~GD~l~Ll~g 105 (119)
T 1ujx_A 83 VQ-----ELKPGLSGSLSLGDVLYLVNG 105 (119)
T ss_dssp SS-----BCCTTCEEEEETTCCCBCBTT
T ss_pred CE-----EecCCCEEEecCCCEEEEecC
Confidence 99 999999999999999997766
No 64
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.01 E-value=7.9e-10 Score=115.58 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=60.5
Q ss_pred CcccCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014684 114 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 193 (420)
Q Consensus 114 ~~w~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~~~~s~~ 193 (420)
++|..+|++|||||||.++|+.|||+|+||+||..|+++|.. ....+.+|+.|+++|+++.+.+.+....
T Consensus 356 ~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~----------~~~~~~~l~~Y~~~~~~~~~~i~~~~~~ 425 (550)
T 2e4g_A 356 RRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD----------KSLNPVLTARFNREIETMFDDTRDFIQA 425 (550)
T ss_dssp SCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC----------TTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc----------cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456679999999999999999999999999999999988842 1245789999999999999988766554
Q ss_pred H
Q 014684 194 A 194 (420)
Q Consensus 194 ~ 194 (420)
.
T Consensus 426 ~ 426 (550)
T 2e4g_A 426 H 426 (550)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.97 E-value=4.1e-09 Score=94.19 Aligned_cols=85 Identities=22% Similarity=0.357 Sum_probs=67.4
Q ss_pred cEEEeecCCCCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEEC-----CEEEEEEcCCCccceecCCCCceEeecCC
Q 014684 300 PIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHGTYVTDNEGRRYRVSSN 374 (420)
Q Consensus 300 ~~~l~~~~~~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-----~~~~i~Dl~S~nGt~vng~~~~~~~l~~~ 374 (420)
.+.|. .+.++|||.... ..|||+|..+.|++.||.|..++ +.++|.++ +.+.|||||. +|.
T Consensus 85 ~y~L~----~g~t~VGr~~~~--~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~VNG~-----~I~-- 150 (184)
T 4egx_A 85 LYYIK----DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTYVNGK-----KVT-- 150 (184)
T ss_dssp EEECC----SEEEEEECSSSS--SCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEEETTE-----ECC--
T ss_pred EEEEC----CCcCcCCCCCcC--CCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEEEcCE-----Ecc--
Confidence 35566 445999997643 23899999999999999999863 45788885 5678999999 885
Q ss_pred CcEEeCCCCEEEECCCceeEEEEEEe
Q 014684 375 FPARFRPSDTIEFGSDKKAIFRVKVI 400 (420)
Q Consensus 375 ~~~~L~~Gd~i~~G~~~~~~~~~~~~ 400 (420)
+++.|++||+|.||... .|+|..+
T Consensus 151 ~~~~L~~GDrI~lG~~h--~Frfn~P 174 (184)
T 4egx_A 151 EPSILRSGNRIIMGKSH--VFRFNHP 174 (184)
T ss_dssp SCEECCTTCEEEETTTE--EEEEECH
T ss_pred ccEEcCCCCEEEECCCC--EEEECCh
Confidence 57999999999999883 4777543
No 66
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.62 E-value=3.2e-08 Score=92.16 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=55.2
Q ss_pred CcEEEcCCCCCCCCcceEEeCCCcccccceEEEEE--C--CEEEEEEcCCCccc-eecCCCCceEeecCCCcEEeC-CCC
Q 014684 310 EPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PSD 383 (420)
Q Consensus 310 ~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~--~--~~~~i~Dl~S~nGt-~vng~~~~~~~l~~~~~~~L~-~Gd 383 (420)
..++|||.+. |||++++. + |+.+.++ + +.|+|+|++|+||| ||||. ++. ....|+ .||
T Consensus 92 ~~itIG~~~~-----~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~GD 155 (238)
T 1wv3_A 92 DTMTIGPNAY-----DDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIGD 155 (238)
T ss_dssp SEEEEESSTT-----SSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETTC
T ss_pred ceEEEeCCCC-----CeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCcC
Confidence 3699999887 89999888 3 5877777 3 58999999999997 99998 886 356899 999
Q ss_pred EEEECCC
Q 014684 384 TIEFGSD 390 (420)
Q Consensus 384 ~i~~G~~ 390 (420)
.|.||..
T Consensus 156 ~I~ig~~ 162 (238)
T 1wv3_A 156 HIYVEGI 162 (238)
T ss_dssp EEEETTE
T ss_pred EEEECCE
Confidence 9999986
No 67
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.34 E-value=1.7e-07 Score=96.70 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=48.2
Q ss_pred CcccCCC-EEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhhccCCCCChhhHHHHHHHHHHHHHHHHHHH
Q 014684 114 FTWGRGR-VTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVI 187 (420)
Q Consensus 114 ~~w~~gr-v~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~y~~~R~~r~~~~ 187 (420)
.+|..|| |+|+|||||...|..|||+|+||+||..|+++|.....+ ....++| .+|++..+.+
T Consensus 388 ~~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~g-------~~~~~~l----~~r~~~~~~l 451 (497)
T 2bry_A 388 EKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEG-------AGPLEVL----AERESLYQLL 451 (497)
T ss_dssp EETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHTT-------CCHHHHH----HHHHHHHTTG
T ss_pred HhcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhCC-------CCccchh----hhHHHHhhhh
Confidence 5788898 999999999544449999999999999999999987432 1234555 7777755443
No 68
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.60 E-value=0.0089 Score=53.49 Aligned_cols=36 Identities=17% Similarity=-0.024 Sum_probs=31.9
Q ss_pred cCCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhhh
Q 014684 117 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACK 158 (420)
Q Consensus 117 ~~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~~ 158 (420)
..+||+|+|||++ |.|++.||.|+..+|+.|.+.++
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999964 78999999999999999988764
No 69
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=92.79 E-value=0.12 Score=48.99 Aligned_cols=34 Identities=18% Similarity=-0.039 Sum_probs=30.2
Q ss_pred CCCEEEEcccccccCCCccchhhhHHHHHHHHHHHHHHhh
Q 014684 118 RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKAC 157 (420)
Q Consensus 118 ~grv~LiGDAAH~~~P~~GqG~~~aieDa~~La~~L~~~~ 157 (420)
.+|++|+|||+|. .|++.|+.|+..||+.|.+..
T Consensus 294 ~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 294 DLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp TTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHh
Confidence 4899999999974 499999999999999998764
No 70
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=29.44 E-value=54 Score=29.51 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=28.4
Q ss_pred CCcEEEcCCCCCCCCcceEEeCCCcccccceEEEEEC-CEEEE
Q 014684 309 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-GAFYL 350 (420)
Q Consensus 309 ~~~~~IGR~~~~~~~~~~i~~~~~~vSr~Ha~i~~~~-~~~~i 350 (420)
...++||...+ |+|.+++. ..|..|.+++ +.|.+
T Consensus 20 ~~~~tiG~~~~-----~~itl~~~---~~~i~l~~~~~~~~~v 54 (238)
T 1wv3_A 20 GKTYTISEDER-----ADITLKSL---GEVIHLEQNNQGTWQA 54 (238)
T ss_dssp TCCEEEESCTT-----SSEECTTC---CCCEEEEECTTSCEEE
T ss_pred CcEEEECCCcc-----ceEEecCC---CccEEEEEccCCeEEE
Confidence 46699999988 99999877 7888898887 77877
No 71
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=29.32 E-value=23 Score=27.22 Aligned_cols=30 Identities=13% Similarity=0.228 Sum_probs=20.2
Q ss_pred CCccceecCCCCceEeec--CCCcEEeCCCCEEEECC
Q 014684 355 SEHGTYVTDNEGRRYRVS--SNFPARFRPSDTIEFGS 389 (420)
Q Consensus 355 S~nGt~vng~~~~~~~l~--~~~~~~L~~Gd~i~~G~ 389 (420)
|.+-..|||+ .+. .+....|++||+|.|=.
T Consensus 63 ~~~~v~VNg~-----~v~~~~~~~~~L~~gD~V~i~p 94 (99)
T 2l52_A 63 GSINILINGN-----NIRHLEGLETLLKDSDEIGILP 94 (99)
T ss_dssp SSCEEEETTS-----CGGGTTSTTSCCCTTEEEEEEC
T ss_pred cccEEEECCE-----EccccCCCCCCCCCCCEEEEEC
Confidence 4445778886 442 13467899999998743
No 72
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=28.06 E-value=25 Score=27.83 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=19.8
Q ss_pred ceecCCCCceEeecCCCcEEeCCCCEEEECC
Q 014684 359 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGS 389 (420)
Q Consensus 359 t~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~ 389 (420)
++|||. -+.+..+..++|++||+|.|=+
T Consensus 70 VLVNg~---d~e~l~gldt~L~dgD~V~fis 97 (110)
T 2k9x_A 70 VLVNSC---DAEVVGGMDYVLNDGDTVEFIS 97 (110)
T ss_dssp EEESSS---BHHHHTSSCCCCCSSCEEEEEE
T ss_pred EEECCe---eeeccCCcccCCCCcCEEEEeC
Confidence 678886 1223356678999999998843
No 73
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=26.78 E-value=25 Score=24.52 Aligned_cols=13 Identities=23% Similarity=0.320 Sum_probs=10.7
Q ss_pred cEEeCCCCEEEEC
Q 014684 376 PARFRPSDTIEFG 388 (420)
Q Consensus 376 ~~~L~~Gd~i~~G 388 (420)
...|++||.|.|=
T Consensus 46 ~~~L~dgD~v~i~ 58 (64)
T 2cu3_A 46 DRPLRDGDVVEVV 58 (64)
T ss_dssp CCCCCTTCEEEEE
T ss_pred CcCCCCCCEEEEE
Confidence 4689999999873
No 74
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=24.80 E-value=26 Score=27.83 Aligned_cols=27 Identities=15% Similarity=0.368 Sum_probs=18.9
Q ss_pred ceecCCCCceEeecCCCcEEeCCCCEEEEC
Q 014684 359 TYVTDNEGRRYRVSSNFPARFRPSDTIEFG 388 (420)
Q Consensus 359 t~vng~~~~~~~l~~~~~~~L~~Gd~i~~G 388 (420)
.|||+.+ ++...+..++|++||+|.|=
T Consensus 76 VlVN~~d---i~~l~gldt~L~dGDeV~ii 102 (114)
T 1wgk_A 76 VLINDAD---WELLGELDYQLQDQDSILFI 102 (114)
T ss_dssp EEESSSB---HHHHCTTTCBCCSSEEEEEE
T ss_pred EEECCee---eeccCCcCcCCCCCCEEEEe
Confidence 7788861 12324567899999999883
No 75
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=24.71 E-value=46 Score=23.80 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=17.2
Q ss_pred ceecCCCCceEeecCCCcEEeCCCCEEEECC
Q 014684 359 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGS 389 (420)
Q Consensus 359 t~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~ 389 (420)
..||+. .+. +....|++||+|.|=.
T Consensus 45 vavN~~-----~v~-~~~~~l~~gDeV~i~P 69 (74)
T 3rpf_C 45 IALNDH-----LID-NLNTPLKDGDVISLLP 69 (74)
T ss_dssp EEESSS-----EEC-CTTCCCCTTCEEEEEC
T ss_pred EEECCE-----EcC-CCCcCCCCCCEEEEEC
Confidence 556776 433 3457899999998743
No 76
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=23.52 E-value=47 Score=23.70 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=17.2
Q ss_pred cceecCCCCceEeecCCCcEEeCCCCEEEEC
Q 014684 358 GTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 388 (420)
Q Consensus 358 Gt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G 388 (420)
-..|||+ .+.. ...|++||+|.|=
T Consensus 48 ~v~vNg~-----~v~~--~~~L~~gD~V~i~ 71 (77)
T 2q5w_D 48 QVAVNEE-----FVQK--SDFIQPNDTVALI 71 (77)
T ss_dssp EEEETTE-----EECT--TSEECTTCEEEEE
T ss_pred EEEECCE-----ECCC--CCCcCCCCEEEEE
Confidence 3667776 5554 3689999999873
No 77
>3mml_A Allophanate hydrolase subunit 2; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=21.37 E-value=1.2e+02 Score=28.72 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=26.8
Q ss_pred CCCccceecCCCCceEeecCCCcEEeCCCCEEEECCC
Q 014684 354 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 390 (420)
Q Consensus 354 ~S~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~ 390 (420)
+..-...|||+ +++..+.+.++.||+++||..
T Consensus 78 GA~~~~~ldg~-----~v~~~~~~~v~~G~~L~~g~~ 109 (318)
T 3mml_A 78 GADTDPAVNGI-----PFGTNSIHHVHDGQVISLGAP 109 (318)
T ss_dssp ESCCCCEETTE-----ECCTTSCEEECTTCEEECCCC
T ss_pred CCCCcceECCE-----EcCCCeEEEECCCCEEEeCCC
Confidence 34455668998 899999999999999999974
No 78
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=20.72 E-value=49 Score=24.37 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=17.0
Q ss_pred ceecCCCCceEeec--CCCcEEeCCCCEEEEC
Q 014684 359 TYVTDNEGRRYRVS--SNFPARFRPSDTIEFG 388 (420)
Q Consensus 359 t~vng~~~~~~~l~--~~~~~~L~~Gd~i~~G 388 (420)
..|||. .+. .+....|++||+|.|=
T Consensus 58 v~vN~~-----~v~~~~~~~~~l~~gD~V~i~ 84 (90)
T 2g1e_A 58 ILVNGN-----NITSMKGLDTEIKDDDKIDLF 84 (90)
T ss_dssp EEESSS-----BGGGTCSSSCBCCTTCEEEEE
T ss_pred EEECCE-----EccccCCCCcCCCCCCEEEEe
Confidence 566765 443 1345789999999874
No 79
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.21 E-value=48 Score=25.56 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=21.2
Q ss_pred CccceecCCCCceEeecCCCcEEeCCCCEEEECCC
Q 014684 356 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 390 (420)
Q Consensus 356 ~nGt~vng~~~~~~~l~~~~~~~L~~Gd~i~~G~~ 390 (420)
.+-..|||+ .++ ....|++||.|.|=..
T Consensus 58 ~~~V~Vng~-----~v~--~d~~L~dGDRVEIyrp 85 (97)
T 2hj1_A 58 TNKIGIFSR-----PIK--LTDVLKEGDRIEIYRP 85 (97)
T ss_dssp TSEEEEEEC-----SCC--TTCBCCTTCEEEECCC
T ss_pred ccEEEEcCE-----ECC--CCccCCCCCEEEEEec
Confidence 456788997 665 4578999999988654
No 80
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=20.15 E-value=3.7e+02 Score=24.26 Aligned_cols=33 Identities=15% Similarity=0.417 Sum_probs=25.2
Q ss_pred CCcEEEcCCCCCCCCcceEEeC---------------CCcccccceEEEEE
Q 014684 309 NEPYLIGSESHEDFSRTSIVIP---------------SAQVSKMHARISYK 344 (420)
Q Consensus 309 ~~~~~IGR~~~~~~~~~~i~~~---------------~~~vSr~Ha~i~~~ 344 (420)
...+-|||+.+.. .|.++- ..+|||.-|+|.++
T Consensus 87 tDMFQIGRste~p---IDFvV~dt~~g~~~~~~~~~~~StISRfACRI~~d 134 (263)
T 3ega_A 87 TDMFQVGRSTESP---IDFVVTDTISGSQNTDEAQITQSTISRFACRIVCD 134 (263)
T ss_dssp EEEEEEESCCSTT---CSEECCCC----------CCCCCCSCSSCEEEEEE
T ss_pred cchhhhcCCCCCC---CCeEEeccccccccCCcCCcccchhhheeEEEEec
Confidence 5668899999854 666642 44699999999986
Done!