Query 014686
Match_columns 420
No_of_seqs 444 out of 1205
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 07:33:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014686.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014686hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 2.2E-37 4.9E-42 271.9 33.4 344 1-412 39-384 (394)
2 TIGR00903 2A0129 major facilit 100.0 2.9E-36 6.3E-41 273.3 32.8 344 1-411 17-362 (368)
3 TIGR00893 2A0114 d-galactonate 100.0 2.7E-36 5.8E-41 279.7 33.1 369 2-411 21-396 (399)
4 PRK11663 regulatory protein Uh 100.0 1.1E-35 2.4E-40 277.4 34.4 366 2-412 50-422 (434)
5 PRK03545 putative arabinose tr 100.0 1.3E-35 2.8E-40 273.8 33.3 342 1-412 35-378 (390)
6 PRK09556 uhpT sugar phosphate 100.0 5.3E-36 1.2E-40 282.3 28.7 381 1-412 55-447 (467)
7 COG2271 UhpC Sugar phosphate p 100.0 2.4E-36 5.3E-41 261.4 23.0 366 1-412 55-432 (448)
8 PRK09705 cynX putative cyanate 100.0 5.9E-35 1.3E-39 269.0 33.2 350 1-420 35-386 (393)
9 TIGR01299 synapt_SV2 synaptic 100.0 7E-35 1.5E-39 280.9 34.5 385 2-419 194-737 (742)
10 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.4E-35 7.5E-40 271.9 30.7 367 1-404 34-411 (412)
11 PRK14995 methyl viologen resis 100.0 3.3E-34 7.1E-39 271.6 36.2 348 1-379 32-413 (495)
12 KOG0569 Permease of the major 100.0 2.1E-34 4.6E-39 260.9 32.8 390 3-420 47-459 (485)
13 TIGR00890 2A0111 Oxalate/Forma 100.0 2.3E-34 5E-39 264.8 30.2 344 2-407 30-375 (377)
14 KOG2615 Permease of the major 100.0 2.2E-35 4.7E-40 250.8 21.2 360 3-383 53-418 (451)
15 PRK12307 putative sialic acid 100.0 5.5E-34 1.2E-38 266.5 32.9 336 2-380 45-384 (426)
16 PRK11551 putative 3-hydroxyphe 100.0 7.5E-34 1.6E-38 263.9 33.1 348 2-412 42-394 (406)
17 PRK10642 proline/glycine betai 100.0 1.2E-33 2.6E-38 267.6 34.9 354 22-411 63-427 (490)
18 PRK10213 nepI ribonucleoside t 100.0 2.8E-33 6.1E-38 257.6 35.8 338 2-411 47-388 (394)
19 TIGR00898 2A0119 cation transp 100.0 1.6E-33 3.6E-38 268.8 35.4 366 1-419 115-498 (505)
20 PRK11273 glpT sn-glycerol-3-ph 100.0 1.9E-33 4.1E-38 263.9 33.1 371 3-418 57-439 (452)
21 PRK10091 MFS transport protein 100.0 2.7E-33 5.9E-38 257.4 33.3 342 2-412 30-374 (382)
22 PRK10406 alpha-ketoglutarate t 100.0 4.8E-33 1E-37 259.7 35.4 346 19-412 66-422 (432)
23 TIGR00900 2A0121 H+ Antiporter 100.0 1.6E-33 3.4E-38 258.1 31.3 331 3-380 27-364 (365)
24 TIGR00891 2A0112 putative sial 100.0 1.6E-33 3.4E-38 261.9 30.4 347 2-380 39-391 (405)
25 TIGR00881 2A0104 phosphoglycer 100.0 3.7E-34 8E-39 263.7 25.8 346 2-380 22-373 (379)
26 PRK09952 shikimate transporter 100.0 1.5E-32 3.3E-37 256.3 36.0 350 23-412 71-431 (438)
27 PRK10077 xylE D-xylose transpo 100.0 1.5E-32 3.3E-37 260.8 35.4 386 3-419 48-461 (479)
28 TIGR00887 2A0109 phosphate:H+ 100.0 3.6E-33 7.7E-38 265.3 30.1 390 18-419 58-492 (502)
29 TIGR00879 SP MFS transporter, 100.0 2.7E-33 5.8E-38 266.2 28.7 367 18-418 73-473 (481)
30 PRK05122 major facilitator sup 100.0 3.2E-32 7E-37 252.3 34.6 336 2-412 43-387 (399)
31 TIGR00711 efflux_EmrB drug res 100.0 1.1E-32 2.3E-37 262.4 32.1 348 2-379 29-410 (485)
32 PRK11195 lysophospholipid tran 100.0 1.9E-32 4.2E-37 252.0 32.4 346 3-412 31-378 (393)
33 PRK15402 multidrug efflux syst 100.0 4.8E-32 1E-36 251.5 34.6 330 2-380 40-371 (406)
34 PRK10489 enterobactin exporter 100.0 1.7E-32 3.7E-37 255.4 30.9 347 3-412 45-397 (417)
35 PRK03633 putative MFS family t 100.0 1E-31 2.3E-36 246.9 35.8 337 2-412 33-370 (381)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 2.8E-32 6E-37 257.5 32.7 366 4-412 70-448 (465)
37 TIGR00899 2A0120 sugar efflux 100.0 1.5E-31 3.1E-36 246.1 36.7 343 2-412 25-372 (375)
38 PRK11646 multidrug resistance 100.0 9.2E-32 2E-36 248.1 34.2 346 2-411 38-385 (400)
39 PRK10504 putative transporter; 100.0 1.9E-31 4.1E-36 252.4 36.4 349 2-382 37-418 (471)
40 PRK03699 putative transporter; 100.0 1.1E-31 2.4E-36 247.7 34.0 341 2-409 34-375 (394)
41 PRK12382 putative transporter; 100.0 9.8E-32 2.1E-36 248.4 33.3 336 2-412 43-387 (392)
42 TIGR00712 glpT glycerol-3-phos 100.0 2.7E-32 5.8E-37 255.2 29.6 375 4-419 55-437 (438)
43 PF07690 MFS_1: Major Facilita 100.0 2.2E-32 4.8E-37 249.3 27.2 325 2-370 24-352 (352)
44 TIGR00897 2A0118 polyol permea 100.0 6.9E-31 1.5E-35 243.0 36.4 352 3-412 41-399 (402)
45 TIGR00710 efflux_Bcr_CflA drug 100.0 4.8E-31 1E-35 243.5 34.6 325 2-376 32-358 (385)
46 PRK15403 multidrug efflux syst 100.0 6.2E-31 1.3E-35 243.5 34.9 347 2-408 43-391 (413)
47 PRK10054 putative transporter; 100.0 1.7E-31 3.6E-36 246.0 30.9 351 2-418 35-387 (395)
48 TIGR00892 2A0113 monocarboxyla 100.0 1.1E-31 2.4E-36 251.5 29.5 363 2-409 46-416 (455)
49 KOG2532 Permease of the major 100.0 7.3E-32 1.6E-36 247.6 27.4 367 3-412 66-445 (466)
50 PRK15034 nitrate/nitrite trans 100.0 6.6E-31 1.4E-35 239.6 33.0 358 3-417 63-457 (462)
51 PRK10133 L-fucose transporter; 100.0 7.3E-31 1.6E-35 244.1 33.2 362 1-412 52-431 (438)
52 PRK09874 drug efflux system pr 100.0 7.5E-31 1.6E-35 244.1 32.7 352 3-412 42-396 (408)
53 PRK15075 citrate-proton sympor 100.0 1.6E-30 3.6E-35 242.8 34.3 336 1-380 41-395 (434)
54 PRK11102 bicyclomycin/multidru 100.0 2.6E-30 5.7E-35 237.8 34.5 323 2-373 18-343 (377)
55 PRK03893 putative sialic acid 100.0 7.7E-31 1.7E-35 250.1 31.9 360 2-403 47-442 (496)
56 TIGR00883 2A0106 metabolite-pr 100.0 1.1E-30 2.5E-35 241.7 31.1 336 24-404 43-391 (394)
57 PLN00028 nitrate transmembrane 100.0 2.6E-31 5.6E-36 250.2 26.9 361 1-412 62-431 (476)
58 PRK11043 putative transporter; 100.0 5.1E-30 1.1E-34 237.6 34.6 324 2-379 33-357 (401)
59 TIGR00902 2A0127 phenyl propri 100.0 1.5E-29 3.2E-34 232.6 36.0 339 2-410 31-375 (382)
60 PRK10473 multidrug efflux syst 100.0 1.8E-29 4E-34 233.2 36.4 319 2-380 30-350 (392)
61 COG2223 NarK Nitrate/nitrite t 100.0 2.8E-31 6.1E-36 230.6 22.2 360 1-417 40-404 (417)
62 cd06174 MFS The Major Facilita 100.0 6.1E-30 1.3E-34 233.1 32.1 323 2-412 26-350 (352)
63 TIGR00895 2A0115 benzoate tran 100.0 6.5E-30 1.4E-34 237.1 30.9 340 2-376 44-397 (398)
64 TIGR00889 2A0110 nucleoside tr 100.0 3.2E-29 7E-34 232.1 33.0 364 2-419 30-406 (418)
65 PRK15011 sugar efflux transpor 100.0 1.6E-28 3.6E-33 226.5 37.3 341 2-412 43-389 (393)
66 PRK11652 emrD multidrug resist 100.0 5.6E-29 1.2E-33 230.1 33.0 324 2-379 35-360 (394)
67 PRK11128 putative 3-phenylprop 100.0 2.6E-28 5.6E-33 224.4 35.5 338 2-409 31-374 (382)
68 TIGR00896 CynX cyanate transpo 100.0 1.3E-28 2.9E-33 224.4 32.3 322 1-381 26-350 (355)
69 PRK11010 ampG muropeptide tran 100.0 5.6E-28 1.2E-32 228.0 37.1 351 3-412 40-401 (491)
70 PF05977 MFS_3: Transmembrane 100.0 2.1E-28 4.6E-33 228.8 33.4 348 15-417 44-397 (524)
71 TIGR00886 2A0108 nitrite extru 100.0 1.3E-29 2.8E-34 232.3 23.3 332 2-365 29-365 (366)
72 TIGR00885 fucP L-fucose:H+ sym 100.0 5.7E-28 1.2E-32 222.8 33.6 338 1-380 29-382 (410)
73 PRK11902 ampG muropeptide tran 100.0 1.7E-27 3.7E-32 220.5 36.4 348 3-412 27-388 (402)
74 KOG1330 Sugar transporter/spin 100.0 1.4E-30 3.1E-35 227.9 14.6 342 2-384 60-417 (493)
75 KOG2533 Permease of the major 100.0 1.3E-28 2.9E-33 226.5 26.7 342 1-371 72-422 (495)
76 PRK09528 lacY galactoside perm 100.0 3.4E-28 7.4E-33 226.6 29.3 353 2-412 38-401 (420)
77 KOG3764 Vesicular amine transp 100.0 3.2E-29 6.8E-34 214.7 20.3 347 4-412 100-452 (464)
78 TIGR00882 2A0105 oligosacchari 100.0 1E-27 2.2E-32 221.8 31.5 353 2-412 30-393 (396)
79 PRK06814 acylglycerophosphoeth 100.0 4.5E-28 9.8E-33 252.4 30.3 344 16-406 52-414 (1140)
80 PRK08633 2-acyl-glycerophospho 100.0 9.3E-28 2E-32 251.0 32.6 351 16-407 47-403 (1146)
81 TIGR00924 yjdL_sub1_fam amino 100.0 9.2E-27 2E-31 218.6 34.0 375 5-412 43-466 (475)
82 KOG0254 Predicted transporter 100.0 2.2E-27 4.8E-32 225.7 29.7 372 18-419 91-487 (513)
83 TIGR00901 2A0125 AmpG-related 100.0 4.1E-27 8.9E-32 214.7 29.4 321 2-363 15-355 (356)
84 PRK10207 dipeptide/tripeptide 100.0 3.6E-26 7.8E-31 214.6 30.2 383 2-411 42-473 (489)
85 TIGR00792 gph sugar (Glycoside 100.0 4.7E-26 1E-30 213.8 30.2 335 2-381 27-382 (437)
86 TIGR02718 sider_RhtX_FptX side 100.0 1.3E-24 2.8E-29 200.6 36.5 349 3-410 29-387 (390)
87 KOG0255 Synaptic vesicle trans 100.0 7.3E-25 1.6E-29 209.7 35.6 358 18-419 120-496 (521)
88 PF00083 Sugar_tr: Sugar (and 100.0 8.9E-33 1.9E-37 260.2 -20.0 376 16-420 46-441 (451)
89 KOG0253 Synaptic vesicle trans 99.9 2.1E-26 4.6E-31 195.1 19.9 367 3-412 106-517 (528)
90 TIGR00805 oat sodium-independe 99.9 4.5E-27 9.7E-32 226.6 18.1 289 1-304 59-415 (633)
91 COG0738 FucP Fucose permease [ 99.9 8.9E-25 1.9E-29 188.9 29.1 353 2-407 40-402 (422)
92 KOG2504 Monocarboxylate transp 99.9 3.6E-25 7.8E-30 206.1 26.9 366 2-412 73-474 (509)
93 COG2807 CynX Cyanate permease 99.9 7.2E-24 1.6E-28 180.5 31.7 343 1-412 38-383 (395)
94 PF03825 Nuc_H_symport: Nucleo 99.9 1E-23 2.2E-28 191.9 35.2 367 3-420 30-400 (400)
95 KOG0252 Inorganic phosphate tr 99.9 6.1E-27 1.3E-31 204.3 8.1 383 18-419 86-501 (538)
96 TIGR00806 rfc RFC reduced fola 99.9 1.6E-23 3.5E-28 187.6 25.8 377 2-412 53-446 (511)
97 PF01306 LacY_symp: LacY proto 99.9 1.3E-22 2.9E-27 180.9 28.5 352 3-412 36-398 (412)
98 PRK09584 tppB putative tripept 99.9 3.6E-22 7.8E-27 188.7 31.4 377 2-408 49-473 (500)
99 TIGR01301 GPH_sucrose GPH fami 99.9 1.1E-21 2.3E-26 180.8 32.9 385 3-419 32-475 (477)
100 PF06609 TRI12: Fungal trichot 99.9 5.2E-22 1.1E-26 185.2 30.4 344 3-379 72-467 (599)
101 PF11700 ATG22: Vacuole efflux 99.9 5.4E-20 1.2E-24 170.7 37.5 364 14-412 68-466 (477)
102 PRK09669 putative symporter Ya 99.9 1.6E-20 3.4E-25 176.2 31.8 334 2-382 37-391 (444)
103 TIGR00788 fbt folate/biopterin 99.9 7.6E-22 1.6E-26 184.9 22.1 347 2-381 53-415 (468)
104 PRK15462 dipeptide/tripeptide 99.9 8.3E-20 1.8E-24 169.0 33.1 376 2-406 37-469 (493)
105 PTZ00207 hypothetical protein; 99.9 1.1E-20 2.3E-25 177.6 27.1 372 1-412 53-550 (591)
106 KOG4686 Predicted sugar transp 99.9 3.4E-22 7.4E-27 163.8 12.5 365 3-412 72-441 (459)
107 PRK10429 melibiose:sodium symp 99.9 7E-20 1.5E-24 172.9 29.8 341 3-382 35-396 (473)
108 TIGR01272 gluP glucose/galacto 99.9 2E-19 4.3E-24 159.4 29.6 293 64-400 5-301 (310)
109 PF13347 MFS_2: MFS/sugar tran 99.9 1.6E-20 3.5E-25 175.3 23.6 336 3-383 30-388 (428)
110 PRK09848 glucuronide transport 99.9 4E-19 8.7E-24 167.0 31.3 328 2-381 36-390 (448)
111 COG2270 Permeases of the major 99.9 2.4E-19 5.2E-24 156.6 25.8 365 12-412 54-427 (438)
112 PF03209 PUCC: PUCC protein; 99.9 3.6E-18 7.8E-23 149.8 33.1 365 2-412 7-396 (403)
113 KOG2816 Predicted transporter 99.8 4.9E-18 1.1E-22 155.8 27.3 331 19-387 65-400 (463)
114 COG2211 MelB Na+/melibiose sym 99.8 1.9E-17 4.1E-22 149.5 29.2 341 3-385 41-402 (467)
115 KOG2325 Predicted transporter/ 99.8 2E-18 4.3E-23 156.1 20.0 366 5-410 66-471 (488)
116 PRK11462 putative transporter; 99.8 1.3E-16 2.9E-21 149.6 33.0 331 3-381 38-389 (460)
117 COG3104 PTR2 Dipeptide/tripept 99.8 1.2E-16 2.7E-21 143.0 27.5 375 5-412 56-485 (498)
118 PF03137 OATP: Organic Anion T 99.7 2.7E-19 5.8E-24 168.4 -0.2 368 1-380 29-515 (539)
119 KOG2563 Permease of the major 99.7 3E-16 6.6E-21 138.1 18.7 332 18-380 81-422 (480)
120 PF03092 BT1: BT1 family; Int 99.6 7.7E-14 1.7E-18 129.3 19.7 376 2-412 17-411 (433)
121 TIGR00880 2_A_01_02 Multidrug 99.6 5.7E-15 1.2E-19 115.4 10.4 108 22-129 4-112 (141)
122 PF05631 DUF791: Protein of un 99.6 8.9E-13 1.9E-17 114.3 21.8 245 3-293 62-314 (354)
123 KOG3626 Organic anion transpor 99.6 3.5E-14 7.6E-19 134.1 12.4 368 1-380 123-650 (735)
124 TIGR01299 synapt_SV2 synaptic 99.5 8.7E-14 1.9E-18 135.4 15.0 141 18-175 597-738 (742)
125 PRK10642 proline/glycine betai 99.5 1.1E-13 2.3E-18 131.6 15.1 155 3-178 279-437 (490)
126 TIGR00889 2A0110 nucleoside tr 99.5 1.4E-13 3.1E-18 127.8 14.3 149 18-176 253-408 (418)
127 PF01770 Folate_carrier: Reduc 99.5 9.7E-11 2.1E-15 104.7 29.6 341 4-371 34-394 (412)
128 PRK10054 putative transporter; 99.5 4.5E-12 9.8E-17 117.1 21.8 173 216-411 7-179 (395)
129 COG2814 AraJ Arabinose efflux 99.5 2.4E-11 5.1E-16 108.1 21.6 176 217-416 14-189 (394)
130 PRK09528 lacY galactoside perm 99.4 4.1E-13 8.9E-18 125.4 10.7 141 18-174 264-407 (420)
131 PRK15011 sugar efflux transpor 99.4 9.5E-13 2.1E-17 121.7 13.0 148 2-172 244-392 (393)
132 PRK05122 major facilitator sup 99.4 2E-12 4.4E-17 119.9 14.8 140 18-173 251-391 (399)
133 PRK11646 multidrug resistance 99.4 2.3E-11 5E-16 112.6 21.7 170 220-412 14-183 (400)
134 PRK10489 enterobactin exporter 99.4 1.5E-12 3.4E-17 121.4 13.7 151 4-176 253-405 (417)
135 PRK11663 regulatory protein Uh 99.4 9.3E-12 2E-16 116.6 17.8 167 221-410 28-194 (434)
136 TIGR00900 2A0121 H+ Antiporter 99.4 3E-11 6.5E-16 110.6 20.5 171 223-411 6-176 (365)
137 cd06174 MFS The Major Facilita 99.4 2.8E-12 6.1E-17 116.7 13.6 141 5-167 206-348 (352)
138 PRK11551 putative 3-hydroxyphe 99.4 5E-12 1.1E-16 117.6 14.0 121 3-129 248-369 (406)
139 TIGR00899 2A0120 sugar efflux 99.4 4.1E-12 8.9E-17 116.9 13.3 147 3-172 228-375 (375)
140 PRK10213 nepI ribonucleoside t 99.4 1E-10 2.2E-15 108.1 22.3 146 250-412 48-193 (394)
141 PRK03545 putative arabinose tr 99.4 7.6E-11 1.6E-15 109.0 21.1 146 250-412 37-182 (390)
142 PRK10091 MFS transport protein 99.4 5.6E-11 1.2E-15 109.5 20.0 178 216-417 3-180 (382)
143 TIGR02332 HpaX 4-hydroxyphenyl 99.4 8.1E-11 1.8E-15 109.4 21.2 157 249-417 35-191 (412)
144 PRK03893 putative sialic acid 99.4 3.3E-12 7.2E-17 122.1 12.3 121 3-129 304-427 (496)
145 TIGR00710 efflux_Bcr_CflA drug 99.4 5.6E-11 1.2E-15 109.8 20.1 145 251-412 34-178 (385)
146 PF07690 MFS_1: Major Facilita 99.4 5.3E-11 1.2E-15 108.4 19.6 162 226-409 6-167 (352)
147 PLN00028 nitrate transmembrane 99.4 1.6E-10 3.5E-15 109.4 23.3 154 250-412 64-217 (476)
148 PRK15462 dipeptide/tripeptide 99.4 7.6E-11 1.6E-15 109.8 19.8 176 215-411 8-186 (493)
149 PRK09874 drug efflux system pr 99.4 7.9E-12 1.7E-16 116.4 13.4 132 18-165 260-392 (408)
150 PRK10504 putative transporter; 99.4 1.1E-10 2.3E-15 110.9 21.3 173 217-412 11-183 (471)
151 PRK09584 tppB putative tripept 99.4 8.9E-11 1.9E-15 111.5 20.5 180 207-407 11-194 (500)
152 TIGR00892 2A0113 monocarboxyla 99.4 1.2E-12 2.7E-17 123.0 7.8 121 3-129 269-394 (455)
153 TIGR00890 2A0111 Oxalate/Forma 99.4 5.7E-12 1.2E-16 115.9 12.1 121 3-129 233-356 (377)
154 PRK12382 putative transporter; 99.3 1.7E-10 3.6E-15 106.9 21.0 176 215-406 14-191 (392)
155 TIGR00924 yjdL_sub1_fam amino 99.3 1.2E-10 2.6E-15 109.9 19.2 175 216-410 10-188 (475)
156 TIGR00902 2A0127 phenyl propri 99.3 2.3E-11 5E-16 112.0 13.8 120 3-129 233-354 (382)
157 PRK14995 methyl viologen resis 99.3 2.7E-10 5.8E-15 108.6 21.0 171 223-417 13-184 (495)
158 TIGR00711 efflux_EmrB drug res 99.3 1.4E-10 3E-15 110.7 18.7 144 252-412 32-175 (485)
159 PRK10473 multidrug efflux syst 99.3 3.8E-10 8.3E-15 104.5 20.7 145 251-412 32-176 (392)
160 PF06963 FPN1: Ferroportin1 (F 99.3 2.7E-08 5.8E-13 90.9 31.8 326 23-372 45-411 (432)
161 TIGR00895 2A0115 benzoate tran 99.3 1.2E-10 2.6E-15 107.9 17.1 144 251-411 46-189 (398)
162 PRK03633 putative MFS family t 99.3 6.4E-11 1.4E-15 109.1 14.9 118 3-129 228-346 (381)
163 COG2271 UhpC Sugar phosphate p 99.3 6.2E-11 1.3E-15 104.3 13.0 152 249-418 56-209 (448)
164 PRK09556 uhpT sugar phosphate 99.3 3.1E-11 6.6E-16 114.3 12.2 122 2-129 286-411 (467)
165 PRK11195 lysophospholipid tran 99.3 6.4E-10 1.4E-14 102.7 20.6 166 215-407 2-167 (393)
166 TIGR00886 2A0108 nitrite extru 99.3 8.2E-10 1.8E-14 101.3 20.9 177 218-406 3-180 (366)
167 PRK10207 dipeptide/tripeptide 99.3 4.7E-10 1E-14 106.0 19.4 172 215-407 13-187 (489)
168 PF05977 MFS_3: Transmembrane 99.3 9.1E-10 2E-14 104.0 21.0 184 210-411 4-187 (524)
169 PRK15403 multidrug efflux syst 99.3 4.7E-10 1E-14 104.3 19.0 149 251-417 45-193 (413)
170 TIGR00891 2A0112 putative sial 99.3 1E-09 2.2E-14 102.1 21.3 143 251-408 41-183 (405)
171 PRK11102 bicyclomycin/multidru 99.3 4.4E-10 9.6E-15 103.5 18.6 144 252-412 21-164 (377)
172 TIGR00903 2A0129 major facilit 99.3 5.6E-10 1.2E-14 101.7 18.9 147 252-417 21-167 (368)
173 PRK11043 putative transporter; 99.3 9E-10 2E-14 102.3 20.7 145 251-412 35-179 (401)
174 PRK03699 putative transporter; 99.3 8.2E-10 1.8E-14 102.2 20.3 145 251-411 36-180 (394)
175 TIGR00893 2A0114 d-galactonate 99.3 2.3E-10 5E-15 105.9 16.7 144 252-412 24-167 (399)
176 TIGR00879 SP MFS transporter, 99.3 8.5E-11 1.8E-15 111.8 14.0 150 3-174 312-474 (481)
177 TIGR00712 glpT glycerol-3-phos 99.3 3E-10 6.5E-15 106.7 17.3 149 252-412 56-204 (438)
178 PRK15402 multidrug efflux syst 99.3 1E-09 2.2E-14 102.1 20.6 150 250-417 41-190 (406)
179 KOG3098 Uncharacterized conser 99.2 1E-08 2.2E-13 93.5 25.9 334 18-375 51-410 (461)
180 PRK11652 emrD multidrug resist 99.2 1.1E-09 2.5E-14 101.4 20.4 145 251-412 37-181 (394)
181 TIGR00897 2A0118 polyol permea 99.2 1.3E-09 2.8E-14 101.2 20.4 156 216-380 13-169 (402)
182 TIGR00885 fucP L-fucose:H+ sym 99.2 2.4E-09 5.2E-14 99.3 22.1 184 218-411 5-204 (410)
183 PRK09705 cynX putative cyanate 99.2 2E-10 4.3E-15 106.2 14.9 152 4-178 234-389 (393)
184 PRK09952 shikimate transporter 99.2 1.6E-10 3.4E-15 108.4 14.1 151 3-173 279-435 (438)
185 PRK15034 nitrate/nitrite trans 99.2 5.4E-09 1.2E-13 96.5 22.4 190 215-412 33-230 (462)
186 PRK12307 putative sialic acid 99.2 2.3E-09 4.9E-14 100.5 20.5 137 250-403 46-182 (426)
187 PF11700 ATG22: Vacuole efflux 99.2 3.1E-10 6.6E-15 106.0 14.1 151 3-174 310-471 (477)
188 TIGR00882 2A0105 oligosacchari 99.2 1.8E-09 3.9E-14 100.0 19.2 179 215-412 1-181 (396)
189 PRK11273 glpT sn-glycerol-3-ph 99.2 1.4E-09 2.9E-14 102.6 18.1 147 253-412 59-206 (452)
190 TIGR00894 2A0114euk Na(+)-depe 99.2 1.3E-09 2.9E-14 103.2 17.6 148 251-412 70-217 (465)
191 PRK11010 ampG muropeptide tran 99.2 2.5E-09 5.5E-14 101.5 19.2 149 3-173 251-405 (491)
192 TIGR00880 2_A_01_02 Multidrug 99.2 6.2E-10 1.3E-14 86.7 12.5 134 266-417 7-140 (141)
193 PF02487 CLN3: CLN3 protein; 99.2 8.3E-08 1.8E-12 86.1 27.3 330 18-377 61-395 (402)
194 PRK11128 putative 3-phenylprop 99.2 5.1E-10 1.1E-14 103.2 13.7 120 3-129 233-354 (382)
195 TIGR00883 2A0106 metabolite-pr 99.2 1.4E-10 3E-15 107.3 9.6 121 3-129 248-374 (394)
196 TIGR00769 AAA ADP/ATP carrier 99.2 6.3E-07 1.4E-11 83.0 33.0 341 18-378 45-438 (472)
197 TIGR00881 2A0104 phosphoglycer 99.1 4.4E-10 9.5E-15 103.4 12.4 144 252-412 25-169 (379)
198 TIGR00898 2A0119 cation transp 99.1 9.7E-10 2.1E-14 105.4 13.2 135 23-175 362-499 (505)
199 TIGR00806 rfc RFC reduced fola 99.1 3.2E-08 6.9E-13 90.1 21.8 146 251-412 55-201 (511)
200 PRK10133 L-fucose transporter; 99.1 2.4E-08 5.2E-13 93.5 22.0 150 218-377 28-177 (438)
201 PRK10077 xylE D-xylose transpo 99.1 1.1E-08 2.4E-13 97.5 19.6 156 251-409 49-210 (479)
202 PF06813 Nodulin-like: Nodulin 99.1 1.8E-09 4E-14 90.9 12.2 121 1-129 28-156 (250)
203 COG2270 Permeases of the major 99.1 9.4E-10 2E-14 97.2 10.8 122 3-130 281-403 (438)
204 TIGR00887 2A0109 phosphate:H+ 99.1 2.3E-08 5E-13 95.6 21.2 157 252-409 51-220 (502)
205 PRK10406 alpha-ketoglutarate t 99.1 2.6E-08 5.6E-13 93.4 21.1 146 259-407 65-212 (432)
206 PRK15075 citrate-proton sympor 99.1 1.1E-09 2.4E-14 102.7 11.6 121 3-129 267-393 (434)
207 TIGR00792 gph sugar (Glycoside 99.1 1.1E-09 2.4E-14 103.0 11.1 112 18-129 259-379 (437)
208 PRK06814 acylglycerophosphoeth 99.1 1.7E-08 3.7E-13 106.3 20.8 186 211-410 6-191 (1140)
209 COG2223 NarK Nitrate/nitrite t 99.0 1.2E-08 2.7E-13 90.2 15.7 147 250-412 42-191 (417)
210 KOG3764 Vesicular amine transp 99.0 3.6E-09 7.8E-14 92.4 11.8 146 250-412 99-245 (464)
211 TIGR02718 sider_RhtX_FptX side 99.0 3.3E-09 7.2E-14 98.1 12.5 121 3-129 236-365 (390)
212 TIGR00926 2A1704 Peptide:H+ sy 99.0 2.4E-07 5.1E-12 89.8 24.9 121 3-129 16-149 (654)
213 PRK08633 2-acyl-glycerophospho 99.0 3.8E-08 8.2E-13 104.1 20.3 162 211-379 4-165 (1146)
214 KOG2532 Permease of the major 99.0 7.4E-08 1.6E-12 89.6 19.8 148 250-412 66-214 (466)
215 KOG1330 Sugar transporter/spin 99.0 5.7E-10 1.2E-14 99.4 5.5 150 250-416 61-210 (493)
216 PRK11902 ampG muropeptide tran 99.0 8.6E-08 1.9E-12 89.0 20.3 165 224-409 7-177 (402)
217 KOG3762 Predicted transporter 99.0 6.1E-08 1.3E-12 88.1 18.2 142 252-410 401-543 (618)
218 TIGR00901 2A0125 AmpG-related 99.0 4.8E-08 1E-12 89.2 18.1 153 252-412 18-176 (356)
219 TIGR01301 GPH_sucrose GPH fami 98.9 1.1E-07 2.4E-12 88.5 19.1 165 252-418 34-221 (477)
220 PRK09848 glucuronide transport 98.9 2.1E-08 4.4E-13 94.6 14.2 112 18-129 266-387 (448)
221 TIGR00805 oat sodium-independe 98.9 1.2E-08 2.5E-13 99.5 12.4 162 248-410 59-277 (633)
222 TIGR00788 fbt folate/biopterin 98.9 6.5E-09 1.4E-13 98.0 10.1 155 3-172 281-447 (468)
223 COG3104 PTR2 Dipeptide/tripept 98.9 2.6E-08 5.7E-13 90.2 13.1 185 212-412 16-204 (498)
224 KOG4686 Predicted sugar transp 98.9 1.3E-08 2.8E-13 84.8 10.1 122 2-131 292-415 (459)
225 PTZ00207 hypothetical protein; 98.9 4.7E-07 1E-11 86.3 22.1 149 250-412 55-203 (591)
226 KOG4332 Predicted sugar transp 98.9 1.3E-07 2.7E-12 78.3 15.6 352 3-410 65-427 (454)
227 TIGR00896 CynX cyanate transpo 98.9 8E-08 1.7E-12 87.7 16.1 139 251-406 29-167 (355)
228 KOG2504 Monocarboxylate transp 98.9 7.5E-09 1.6E-13 97.4 9.4 148 3-171 326-476 (509)
229 PF01306 LacY_symp: LacY proto 98.9 4.6E-08 1E-12 88.3 13.4 147 14-176 257-406 (412)
230 PF06609 TRI12: Fungal trichot 98.8 1.4E-07 3.1E-12 89.3 16.1 146 252-416 74-219 (599)
231 KOG0569 Permease of the major 98.8 1.1E-07 2.4E-12 87.7 14.9 151 4-177 299-461 (485)
232 KOG3810 Micronutrient transpor 98.8 1.4E-07 3.1E-12 80.9 14.1 361 26-412 52-419 (433)
233 TIGR01272 gluP glucose/galacto 98.8 5.3E-08 1.1E-12 86.6 12.3 117 4-129 172-289 (310)
234 PF03825 Nuc_H_symport: Nucleo 98.8 5.9E-08 1.3E-12 89.0 12.9 146 18-173 245-398 (400)
235 KOG2615 Permease of the major 98.8 1.4E-07 3E-12 82.2 14.1 118 253-378 64-181 (451)
236 COG0738 FucP Fucose permease [ 98.8 1.3E-06 2.7E-11 77.3 19.6 187 221-417 18-213 (422)
237 PRK09669 putative symporter Ya 98.8 1.4E-07 3E-12 88.9 13.9 170 234-412 27-202 (444)
238 PRK10429 melibiose:sodium symp 98.8 2.5E-07 5.4E-12 87.8 15.7 179 230-418 20-204 (473)
239 KOG0637 Sucrose transporter an 98.7 1.2E-07 2.7E-12 84.6 11.7 109 18-126 69-201 (498)
240 KOG0253 Synaptic vesicle trans 98.7 3.3E-08 7.1E-13 85.6 7.7 128 26-174 391-522 (528)
241 COG0477 ProP Permeases of the 98.7 3.3E-07 7.1E-12 81.7 13.9 112 18-129 41-157 (338)
242 KOG2533 Permease of the major 98.7 8.6E-07 1.9E-11 82.9 16.3 156 250-417 74-229 (495)
243 KOG0254 Predicted transporter 98.6 2.9E-06 6.2E-11 81.4 18.9 144 257-418 89-232 (513)
244 PRK11462 putative transporter; 98.6 2.2E-06 4.7E-11 80.9 17.0 174 236-418 29-207 (460)
245 KOG3574 Acetyl-CoA transporter 98.6 1.5E-06 3.2E-11 75.8 13.9 322 33-381 80-433 (510)
246 KOG3762 Predicted transporter 98.6 8.8E-08 1.9E-12 87.1 5.9 129 3-144 399-529 (618)
247 PF13347 MFS_2: MFS/sugar tran 98.6 1.1E-06 2.3E-11 82.4 13.0 112 18-129 262-383 (428)
248 PF03219 TLC: TLC ATP/ADP tran 98.4 0.001 2.2E-08 62.4 29.1 346 18-380 60-457 (491)
249 PF05978 UNC-93: Ion channel r 98.4 5.1E-06 1.1E-10 64.7 11.4 108 21-129 42-150 (156)
250 COG2807 CynX Cyanate permease 98.4 2.8E-05 6.1E-10 67.9 16.6 146 249-412 39-184 (395)
251 KOG0255 Synaptic vesicle trans 98.4 8.3E-06 1.8E-10 78.6 14.9 138 252-409 113-250 (521)
252 PF13000 Acatn: Acetyl-coenzym 98.4 0.00018 3.9E-09 65.7 21.6 167 209-381 271-469 (544)
253 PF05631 DUF791: Protein of un 98.4 0.00035 7.7E-09 61.5 22.5 150 252-418 64-219 (354)
254 KOG0252 Inorganic phosphate tr 98.3 5.5E-06 1.2E-10 74.4 10.6 129 252-381 79-208 (538)
255 COG2211 MelB Na+/melibiose sym 98.3 2.1E-05 4.6E-10 72.2 14.5 176 235-419 31-211 (467)
256 PF06813 Nodulin-like: Nodulin 98.2 5.4E-05 1.2E-09 64.1 13.8 137 238-379 20-157 (250)
257 KOG1237 H+/oligopeptide sympor 98.2 0.001 2.2E-08 63.9 23.1 128 4-144 67-227 (571)
258 PF03209 PUCC: PUCC protein; 98.2 4.8E-05 1E-09 68.0 13.1 152 3-166 237-393 (403)
259 TIGR00939 2a57 Equilibrative N 98.2 0.00082 1.8E-08 62.5 21.6 52 321-372 376-427 (437)
260 PF07672 MFS_Mycoplasma: Mycop 98.1 9.1E-05 2E-09 61.8 12.8 243 100-369 2-258 (267)
261 PF06779 DUF1228: Protein of u 98.1 6E-06 1.3E-10 56.3 4.9 66 1-72 18-83 (85)
262 KOG2563 Permease of the major 98.1 5.7E-05 1.2E-09 67.9 11.8 128 252-381 75-204 (480)
263 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00025 5.5E-09 69.2 16.8 168 237-412 8-180 (654)
264 PF00854 PTR2: POT family; In 98.0 0.00017 3.8E-09 66.1 15.0 104 47-166 2-118 (372)
265 KOG2816 Predicted transporter 98.0 0.00039 8.4E-09 64.9 17.2 131 267-418 72-202 (463)
266 COG3202 ATP/ADP translocase [E 97.9 0.016 3.5E-07 53.3 30.5 341 18-380 63-460 (509)
267 PF00083 Sugar_tr: Sugar (and 97.9 1.7E-07 3.7E-12 88.5 -7.6 136 27-177 297-443 (451)
268 KOG2325 Predicted transporter/ 97.9 0.0005 1.1E-08 63.6 14.0 163 252-417 66-231 (488)
269 KOG3880 Predicted small molecu 97.8 0.00039 8.4E-09 59.3 12.0 108 18-129 64-171 (409)
270 PF12832 MFS_1_like: MFS_1 lik 97.8 4.1E-05 8.8E-10 51.8 4.5 47 3-55 28-74 (77)
271 PF05978 UNC-93: Ion channel r 97.7 0.0074 1.6E-07 47.2 16.7 105 265-377 45-149 (156)
272 PF03092 BT1: BT1 family; Int 97.4 0.0053 1.2E-07 57.4 15.0 147 252-412 20-173 (433)
273 KOG1479 Nucleoside transporter 97.4 0.02 4.2E-07 51.8 17.0 51 321-371 347-397 (406)
274 PF12832 MFS_1_like: MFS_1 lik 97.4 0.0032 6.9E-08 42.6 9.2 68 223-297 7-74 (77)
275 PRK03612 spermidine synthase; 97.3 0.14 3E-06 49.1 22.6 164 226-408 24-191 (521)
276 TIGR00769 AAA ADP/ATP carrier 97.2 0.22 4.8E-06 46.8 22.8 125 255-379 41-191 (472)
277 PF01770 Folate_carrier: Reduc 97.0 0.24 5.3E-06 45.3 19.8 159 235-412 22-180 (412)
278 COG0477 ProP Permeases of the 96.8 0.21 4.6E-06 43.8 18.9 135 257-404 39-175 (338)
279 PF03137 OATP: Organic Anion T 96.8 0.00024 5.3E-09 67.9 -0.7 163 248-411 29-247 (539)
280 PF00854 PTR2: POT family; In 96.5 0.025 5.4E-07 52.0 10.4 114 289-412 2-121 (372)
281 KOG3626 Organic anion transpor 96.4 0.014 3E-07 56.8 8.1 163 249-412 124-341 (735)
282 KOG3098 Uncharacterized conser 96.2 0.059 1.3E-06 50.1 10.7 107 19-126 282-410 (461)
283 PF01733 Nucleoside_tran: Nucl 96.1 0.0018 3.9E-08 57.6 0.7 53 321-373 252-304 (309)
284 PF02487 CLN3: CLN3 protein; 96.1 0.058 1.3E-06 49.2 10.1 107 18-128 283-395 (402)
285 PF06779 DUF1228: Protein of u 95.6 0.26 5.7E-06 33.8 9.2 71 232-309 8-78 (85)
286 PRK03612 spermidine synthase; 95.5 0.2 4.3E-06 48.1 11.7 110 18-129 52-170 (521)
287 PF06963 FPN1: Ferroportin1 (F 95.4 2.3 4.9E-05 39.7 19.7 178 218-411 4-197 (432)
288 KOG3097 Predicted membrane pro 94.6 3 6.6E-05 36.8 15.9 100 26-126 68-183 (390)
289 KOG0637 Sucrose transporter an 93.2 0.34 7.3E-06 44.6 6.9 122 252-374 62-200 (498)
290 KOG2601 Iron transporter [Inor 92.5 1.2 2.6E-05 40.0 9.1 103 27-129 74-200 (503)
291 KOG1479 Nucleoside transporter 91.5 11 0.00024 34.6 15.3 40 316-356 116-155 (406)
292 KOG3574 Acetyl-CoA transporter 91.5 6.5 0.00014 35.7 12.5 37 337-373 153-189 (510)
293 KOG1237 H+/oligopeptide sympor 90.0 16 0.00034 35.8 15.0 149 252-411 68-242 (571)
294 KOG4332 Predicted sugar transp 89.2 1.3 2.8E-05 37.8 6.1 146 251-412 66-218 (454)
295 KOG3880 Predicted small molecu 89.1 2 4.4E-05 37.5 7.3 75 54-128 327-402 (409)
296 PF03219 TLC: TLC ATP/ADP tran 89.1 22 0.00047 34.1 22.6 123 255-378 56-205 (491)
297 TIGR00939 2a57 Equilibrative N 87.1 7.3 0.00016 36.6 10.5 110 17-127 308-431 (437)
298 PF07672 MFS_Mycoplasma: Mycop 80.0 14 0.0003 31.6 8.2 103 18-120 143-255 (267)
299 COG5336 Uncharacterized protei 75.5 12 0.00025 26.8 5.3 40 18-57 44-84 (116)
300 KOG2601 Iron transporter [Inor 74.1 72 0.0016 29.3 11.4 48 349-406 171-218 (503)
301 TIGR02230 ATPase_gene1 F0F1-AT 68.2 32 0.0007 24.5 6.3 26 275-300 60-85 (100)
302 COG3202 ATP/ADP translocase [E 67.9 1.1E+02 0.0025 29.1 18.6 125 254-380 58-211 (509)
303 PF01733 Nucleoside_tran: Nucl 67.5 2 4.3E-05 38.3 0.4 106 20-126 186-306 (309)
304 COG4262 Predicted spermidine s 66.0 1.1E+02 0.0023 27.9 16.0 82 317-409 105-186 (508)
305 KOG3810 Micronutrient transpor 63.1 21 0.00045 32.2 5.6 112 15-129 270-384 (433)
306 PF11947 DUF3464: Protein of u 54.3 92 0.002 24.3 7.2 40 329-368 106-145 (153)
307 COG5336 Uncharacterized protei 52.1 88 0.0019 22.6 6.8 35 347-381 36-70 (116)
308 PRK11469 hypothetical protein; 51.2 1.3E+02 0.0029 24.4 15.9 51 253-303 130-180 (188)
309 KOG4830 Predicted sugar transp 50.5 3.2 6.9E-05 35.3 -1.2 65 206-275 191-255 (412)
310 PF02990 EMP70: Endomembrane p 49.7 2.4E+02 0.0051 27.5 10.9 26 261-287 301-326 (521)
311 PF11085 YqhR: Conserved membr 47.2 1.4E+02 0.0031 23.7 11.0 49 254-303 63-114 (173)
312 COG4769 Predicted membrane pro 47.2 34 0.00073 26.8 3.8 52 24-81 81-132 (181)
313 PF07760 DUF1616: Protein of u 46.3 2.1E+02 0.0045 25.2 11.7 57 72-128 22-78 (287)
314 PF13000 Acatn: Acetyl-coenzym 45.9 1.6E+02 0.0036 28.3 8.7 55 75-129 411-466 (544)
315 KOG2881 Predicted membrane pro 45.4 81 0.0018 27.0 6.0 25 277-301 259-283 (294)
316 COG1268 BioY Uncharacterized c 43.5 94 0.002 25.2 6.0 23 23-45 89-111 (184)
317 PF07857 DUF1632: CEO family ( 41.4 2.3E+02 0.005 24.4 11.2 18 154-171 119-136 (254)
318 PF02632 BioY: BioY family; I 41.3 1E+02 0.0022 24.0 5.8 41 23-63 60-100 (148)
319 PF02694 UPF0060: Uncharacteri 41.2 62 0.0013 23.3 4.1 48 18-65 56-103 (107)
320 PF11299 DUF3100: Protein of u 40.0 23 0.0005 29.5 2.2 51 76-127 178-229 (241)
321 PF04281 Tom22: Mitochondrial 39.7 1.4E+02 0.003 22.8 6.1 26 342-367 60-85 (137)
322 PF09527 ATPase_gene1: Putativ 37.7 98 0.0021 19.0 6.1 31 271-301 14-44 (55)
323 TIGR00986 3a0801s05tom22 mitoc 37.2 1.2E+02 0.0025 23.4 5.2 27 341-367 57-83 (145)
324 PF02667 SCFA_trans: Short cha 36.5 1.9E+02 0.0041 27.3 7.6 18 206-223 241-258 (453)
325 PF04024 PspC: PspC domain; I 35.1 30 0.00065 22.1 1.7 34 137-174 23-60 (61)
326 PRK02237 hypothetical protein; 35.0 1.1E+02 0.0023 22.2 4.5 48 18-65 58-105 (109)
327 TIGR00366 conserved hypothetic 34.9 2E+02 0.0044 27.0 7.5 16 208-223 240-255 (438)
328 PF11947 DUF3464: Protein of u 34.3 90 0.0019 24.4 4.4 52 67-120 95-146 (153)
329 KOG3097 Predicted membrane pro 34.0 3.6E+02 0.0079 24.5 8.9 25 277-301 77-101 (390)
330 COG4262 Predicted spermidine s 30.5 4.3E+02 0.0094 24.3 11.3 78 18-95 45-132 (508)
331 PF13386 DsbD_2: Cytochrome C 30.5 3E+02 0.0066 22.5 13.9 22 254-275 147-168 (199)
332 PF06341 DUF1056: Protein of u 30.1 1.2E+02 0.0025 19.5 3.6 36 68-103 27-62 (63)
333 CHL00031 psbT photosystem II p 29.4 1E+02 0.0022 16.7 3.5 17 162-178 15-31 (33)
334 PRK10720 uracil transporter; P 29.3 4.9E+02 0.011 24.6 9.4 13 165-177 400-412 (428)
335 PF10785 NADH-u_ox-rdase: NADH 28.5 2E+02 0.0044 19.9 5.2 43 26-68 28-77 (86)
336 COG0861 TerC Membrane protein 25.7 4.4E+02 0.0095 22.8 15.6 25 83-107 30-55 (254)
337 TIGR02840 spore_YtaF putative 25.4 3.9E+02 0.0085 22.1 16.0 32 253-284 153-184 (206)
338 PLN02878 homogentisate phytylt 23.4 3.6E+02 0.0077 23.7 6.7 22 42-63 195-216 (280)
339 COG4177 LivM ABC-type branched 23.4 1.6E+02 0.0034 26.4 4.7 59 70-129 209-268 (314)
340 PF11151 DUF2929: Protein of u 23.1 2E+02 0.0044 18.0 5.8 26 148-173 30-55 (57)
341 PF06781 UPF0233: Uncharacteri 23.0 2.7E+02 0.0058 19.4 7.3 8 170-177 1-8 (87)
342 PRK10697 DNA-binding transcrip 22.1 2E+02 0.0043 21.4 4.2 13 164-176 57-69 (118)
343 PF05653 Mg_trans_NIPA: Magnes 21.7 5.7E+02 0.012 22.7 10.0 19 209-227 44-62 (300)
344 PF07456 Hpre_diP_synt_I: Hept 20.9 3.9E+02 0.0084 20.8 5.8 50 23-78 68-117 (148)
345 PRK10263 DNA translocase FtsK; 20.4 1.2E+03 0.026 25.9 13.1 17 364-380 142-158 (1355)
346 PF11298 DUF3099: Protein of u 20.1 1.6E+02 0.0034 19.7 3.0 32 38-69 9-40 (73)
347 TIGR02908 CoxD_Bacillus cytoch 20.1 3.6E+02 0.0078 19.7 6.9 36 253-289 50-85 (110)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=271.90 Aligned_cols=344 Identities=21% Similarity=0.244 Sum_probs=281.2
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
|++|+|+|..+ .|+..|+|.+++.+++|+...+.||+.||++++..+.++.++++++++++||+.++++|++.|
T Consensus 39 iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g 112 (394)
T COG2814 39 IAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAG 112 (394)
T ss_pred HHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46899999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
+..|.+.+. .++..|..|++||++++++...+.+++.++|.+++.++.+ .+|||..| ...+..
T Consensus 113 ~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~-------~~GWR~~F---------~~ia~l 176 (394)
T COG2814 113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ-------LFGWRATF---------LAIAVL 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-------HhhHHHHH---------HHHHHH
Confidence 999999998 9999999999999999999999999999999999999999 77777666 566666
Q ss_pred HHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
+++. +..+..+| |++.++++ +.+..+..+++|+|+++...+...+....++...++
T Consensus 177 ~ll~~~~~~~~lP--~~~~~~~~---------------------~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftY 233 (394)
T COG2814 177 ALLALLLLWKLLP--PSEISGSL---------------------PGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTY 233 (394)
T ss_pred HHHHHHHHHHhCC--CccCCCCC---------------------CcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHh
Confidence 6554 45677788 22211111 011223567899999999999988888888888777
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
...++.+. .|++....+..+..++++.++++. +++++.|| +.++.+.....+..+..+.+.+..... +.
T Consensus 234 i~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn~-~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~----~~ 302 (394)
T COG2814 234 IRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGNL-LGGRLADR-GPRRALIAALLLLALALLALTFTGASP----AL 302 (394)
T ss_pred HHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHHH-HHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchH----HH
Confidence 77777666 899999999999999999999998 88888888 888888777777766666655543221 22
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
..+..++.++.............++ ..||.++.+.+++....++|..+|..++|.++|+. |+....++
T Consensus 303 -~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~----------g~~~~~~~ 370 (394)
T COG2814 303 -ALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL----------GYAATGWV 370 (394)
T ss_pred -HHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------chHHHHHH
Confidence 2222222333333333344444444 44699999999999999999999999999999997 89999999
Q ss_pred HHHHHHHHHHHHhh
Q 014686 399 LNVVEAIGVLMTFK 412 (420)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (420)
.+.+.+++.++.+.
T Consensus 371 ~a~l~~~a~~~~~~ 384 (394)
T COG2814 371 GAALLLLALLLALL 384 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887765
No 2
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.9e-36 Score=273.31 Aligned_cols=344 Identities=15% Similarity=0.083 Sum_probs=244.0
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+++|+|+|++| .|++.+.+.+++.+++++.|+++||+|||+++..+......+......++|++.+++.|+++|
T Consensus 17 i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 17 VAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46899999999 999999999999999999999999999999877665555554433333479999999999999
Q ss_pred hhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 81 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 81 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
++.+...+....++|++|+|+|++++++...+..+|.++++++++.+.+ .+|||..| ...+++.
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~gWr~~f---------~~~~~l~ 154 (368)
T TIGR00903 91 LGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGGLQLLI---------IPIAAVA 154 (368)
T ss_pred hHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccchHHHH---------HHHHHHH
Confidence 9988755556677999999999999999999999999999999999987 55666554 5655555
Q ss_pred HH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++ .++.++++||+|++++++. + . + + ..++.++++|||.+|...+..++.........++.
T Consensus 155 ~~~~~~~~~~lp~~p~~~~~~~---~-~-~-------~-------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wl 215 (368)
T TIGR00903 155 AAGIILVLAALPALPFQAAEGF---G-F-K-------D-------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWL 215 (368)
T ss_pred HHHHHHHHHHcCCCCCCCCCCc---c-h-H-------H-------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 4456678899876532110 0 0 0 0 00135678999999999999999888888888999
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
|.|+.+ .|++.. .+.......+.+.++......+.+|+ ++|+. ......+..+....+.... . ...
T Consensus 216 p~~L~~------~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~-~~r~~~~~~~~~~~a~~~~~~~~~~---~--~~~ 282 (368)
T TIGR00903 216 EAALRP------AGLEDI-AGDAVALAILAGLIGVAVIPDRVARA-GLRSIYIRAAALLIAAFFLALAFEL---N--RLA 282 (368)
T ss_pred HHHHHH------CCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHcc---c--cHH
Confidence 999854 356654 56666555665655544344444433 32333 2223332222222222111 1 111
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
......+.+++.....+..+.+.+|.+|++.||++.|+.+...++++..+|.+.+.+.. +....|.+
T Consensus 283 -~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~------------~~~~~f~~ 349 (368)
T TIGR00903 283 -LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS------------SAEAYFTF 349 (368)
T ss_pred -HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc------------CHHHHHHH
Confidence 12222333344555556677899999999999999999999999999999999988772 35567777
Q ss_pred HHHHHHHHHHHHh
Q 014686 399 LNVVEAIGVLMTF 411 (420)
Q Consensus 399 ~~~~~~~~~~~~~ 411 (420)
.+...+++.+...
T Consensus 350 ~~~~~~i~~~~~~ 362 (368)
T TIGR00903 350 LAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777766654
No 3
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.7e-36 Score=279.67 Aligned_cols=369 Identities=17% Similarity=0.139 Sum_probs=269.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++..++++++|++.+++.|+++|+
T Consensus 21 ~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 94 (399)
T TIGR00893 21 QEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGA 94 (399)
T ss_pred HHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..++.|++|+|+|++++++.....++|..++|.+++.+.+ ..+||+. +...++..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~---------~~~~~~~~ 158 (399)
T TIGR00893 95 AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------HFSWQWA---------FIIEGVLG 158 (399)
T ss_pred HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-------hCCchHH---------HHHHHHHH
Confidence 99988887 9999999999999999999999999999999999999887 4455544 35555555
Q ss_pred HHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++..+ ..+..||++++.+..++++++...+....+.+.+++++++....++.+|+|+++...+..++..........+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (399)
T TIGR00893 159 IIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWF 238 (399)
T ss_pred HHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 54333 34455665543222111111100000000001111222334456788899999988888888887777788888
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH--HHHHHHHHHHH--HHHHHHHHHHhhhhH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM--VARIAGVLTIP--LLTSYPYIAMLSGFG 315 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~ 315 (420)
|.|..+. .|.++.+.+.......+..+++.+ ..+++.||.++|+ ........... ............. .
T Consensus 239 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 311 (399)
T TIGR00893 239 PTYLVQE-----RGLSILEAGFMASLPGIVGFIGMI-LGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN-I 311 (399)
T ss_pred HHHHHHH-----hcccHHHhhHHHHHHHHHHHHHHH-HHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch-h
Confidence 8887665 688899999999998999988887 7777888878775 11111111111 1111111111011 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC-chH
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG-SQM 394 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g-~~~ 394 (420)
.+ .. ......+.+..+..+....+.+|..|+++|+++.|+.+...++|+.++|.+.|.+.|.. + +..
T Consensus 312 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~----------g~~~~ 379 (399)
T TIGR00893 312 PY-AA-LALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT----------GSFAG 379 (399)
T ss_pred HH-HH-HHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC----------CchhH
Confidence 11 11 12222223334478888999999999999999999999999999999999999999987 5 888
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014686 395 VFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 395 ~f~~~~~~~~~~~~~~~ 411 (420)
.|.+.+++.+++.+..+
T Consensus 380 ~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 380 ALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888877766554
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-35 Score=277.45 Aligned_cols=366 Identities=15% Similarity=0.141 Sum_probs=258.4
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.|+++ .|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.|+
T Consensus 50 ~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 123 (434)
T PRK11663 50 LADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAF 123 (434)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.|...+. .+++.|++|+|+|++++++.+.+.++|.+++|.+++.+.+ .+|||+.| .+.++..
T Consensus 124 ~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~gw~~~f---------~~~~i~~ 187 (434)
T PRK11663 124 FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL-------HYGWRYGM---------MIAGIIA 187 (434)
T ss_pred HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cccHHHHH---------HHHHHHH
Confidence 98887776 8999999999999999999999999999999999999987 55665544 5555544
Q ss_pred HH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCc-h-hhhccchhHHHHHHHHHHHHhhhhhHHH
Q 014686 161 FG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-K-KSLLKNWPLMSSIIVYCVFSLHDMAYSE 237 (420)
Q Consensus 161 ~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
++ .++..+.+||+|++...++.++.+. +..+.. ++ ++.++.+... . ...+|++.++...+..++..........
T Consensus 188 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (434)
T PRK11663 188 IVVGLFLCWRLRDKPQAMGLPSVGEWRH-DALELA-QQ-QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAIND 264 (434)
T ss_pred HHHHHHHHHHcCCCHhhcCCCCcccccc-cccccc-hh-ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 43 3344556787765432111110000 000000 00 0000001111 1 2366788888877776666666666677
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chH-HHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPI-MVARIAGVLTIPLLTSYPYIAMLSGF 314 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
+.|.|+.+. +|++..+.+...+...++..++++ ..+++.||+ ++| ................+..... .
T Consensus 265 ~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~- 335 (434)
T PRK11663 265 WGNLYMSET-----LGVDLVTANSAVSMFELGGFIGAL-VAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF--A- 335 (434)
T ss_pred HHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc--c-
Confidence 888887554 789999999999999999999988 777888876 222 2222211111111111111111 1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchH
Q 014686 315 GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQM 394 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~ 394 (420)
.... .....+..+++.............|..|+++|+++.|+.+...++|++++|.+.|.+.|.. |++.
T Consensus 336 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~----------g~~~ 404 (434)
T PRK11663 336 SYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW----------HWTG 404 (434)
T ss_pred cHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc----------ccHH
Confidence 1111 1111222222222222334456678899999999999999999999999999999999987 8999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 014686 395 VFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 395 ~f~~~~~~~~~~~~~~~~ 412 (420)
.|.+.+++.+++.+..+.
T Consensus 405 ~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 405 FFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999998888887766654
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=273.82 Aligned_cols=342 Identities=16% Similarity=0.148 Sum_probs=256.4
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+++|+|.|+++ .|++.+.+.+++.+++++.|+++||+|||+++..+..+..++++.+++++|++.+++.|+++|
T Consensus 35 l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 108 (390)
T PRK03545 35 IAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIA 108 (390)
T ss_pred HHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35789999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.+...+. .+++.|++|+|+|++++++...+.++|..++|++++.+.+ .+|||+.| ...++.
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f---------~~~~~~ 172 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ-------YLGWRTTF---------LAIGGG 172 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH-------HhcHHHHH---------HHHHHH
Confidence 998888787 8999999999999999999999999999999999999987 56666554 555555
Q ss_pred HHHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.++.. .....+||++++++ +. .++.++.+|+|.++......++..........+
T Consensus 173 ~~l~~~~~~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (390)
T PRK03545 173 ALITLLLLIKLLPLLPSEHS------GS-------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSY 227 (390)
T ss_pred HHHHHHHHHHhCCCCCCCCc------ch-------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433 33445565432110 00 012356788888776555544444443444445
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
.+.+..+. .|+++.+.+......+++.++++. ..+++.||.++|... .+..+............ ++ ..
T Consensus 228 ~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~--~~---~~ 295 (390)
T PRK03545 228 IEPFVQQV-----AGLSENFATLLLLLFGGAGIIGSV-LFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA--NS---EW 295 (390)
T ss_pred HHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHHH-HHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh--ch---HH
Confidence 55555433 688899999999998999999988 667788887876543 33333333332221111 11 11
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
.+.....+.+.......+.......+..| +++++++|+.+...++|..+||.+.|.++|.. |++..|..
T Consensus 296 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~----------g~~~~~~~ 364 (390)
T PRK03545 296 HLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL----------GLSSIGYV 364 (390)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------ChhHHHHH
Confidence 22233333444444445556667777655 78999999999999999999999999999998 89999999
Q ss_pred HHHHHHHHHHHHhh
Q 014686 399 LNVVEAIGVLMTFK 412 (420)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (420)
.+.+.+++.++.+.
T Consensus 365 ~~~~~~~~~~~~~~ 378 (390)
T PRK03545 365 GAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888888777665
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.3e-36 Score=282.26 Aligned_cols=381 Identities=14% Similarity=0.058 Sum_probs=258.4
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh-----hhhHHHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-----SVNFWMAVLT 75 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 75 (420)
+++|+|+++.+ .|++.+++.+++.+++++.|+++||+|||+++..+.+++++..+..++ ++|++.+++.
T Consensus 55 i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 55 MISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred HHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 36789999999 999999999999999999999999999999998888888777766655 6899999999
Q ss_pred HHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHH
Q 014686 76 RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCL 154 (420)
Q Consensus 76 r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~ 154 (420)
|+++|++.+...|. .++++|++|+++|++++++...+.++|.+++++++.++.+... ..+|| ..+.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~----~~~~~---------~~f~ 195 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF----DGHVI---------GMFI 195 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc----cCcch---------hHHH
Confidence 99999999888887 8999999999999999999999999999999999877665100 01243 3334
Q ss_pred HHHHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCC-C-chhhhccchhHHHHHHHHHHHHhh
Q 014686 155 CISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA-T-PKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 155 ~~~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
..++..++. ++.+++.+|+|++.+..++++ ...+...++ ++..++++... . ..++.+|+|.+|...+..++....
T Consensus 196 ~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 273 (467)
T PRK09556 196 FPSIIALIIGFIGLRYGSDSPEELGWGKAEE-IFGEPISEE-DKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIV 273 (467)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCCCChhh-cccCccchh-hhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 545544443 334445566554322111111 000000000 00000000000 1 122378999999888888777777
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
......+.|.|+.+. +|++..+++.......++.+++.+ ..+++.||+++|+.................. ...
T Consensus 274 ~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~-~~~ 346 (467)
T PRK09556 274 RIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGSL-LWGWLSDLANGRRALVACIALALIIFTLGVY-QHA 346 (467)
T ss_pred HHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 667778899888665 789999999999888888888887 8888999989887665544333332222111 111
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHH-HHHHhhhhhhHHHHhhhhcc-C-CCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKAAGPAGGGALFSWAQKRL-D-ASF 388 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~-~-~~~ 388 (420)
. ... ...+..+..+....+..........|..|++.+|++.|+.+...++ |.+++|.+.|.+.|...+.. . ...
T Consensus 347 ~--~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~ 423 (467)
T PRK09556 347 T--SEY-MYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYT 423 (467)
T ss_pred C--cHH-HHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccc
Confidence 1 111 1212222222222222223345666899999999999999999997 77999999999999211100 0 000
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 014686 389 LPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 389 ~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
..+|+..|.+..++.+++.+..+.
T Consensus 424 ~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 424 LTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHH
Confidence 127999999988888887666554
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=261.44 Aligned_cols=366 Identities=19% Similarity=0.166 Sum_probs=287.0
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
|+||.++|.+| .|++.+++.+.|.++..+.|.++||.++|+.+..++++.++..++++++++.+.+.+..+++|
T Consensus 55 l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng 128 (448)
T COG2271 55 LIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNG 128 (448)
T ss_pred HHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46788899999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHH--hHhccccccCCccccccccccCccchHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
..+|.-.|. ...++.|+|++|||+..++++.+.|+|..+.|++. +++.. +.+||..| +..+
T Consensus 129 ~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~-------~~~w~~~f---------~~pg 192 (448)
T COG2271 129 WFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF-------HGGWRAAF---------YFPG 192 (448)
T ss_pred HHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh-------ccchhHHH---------HHHH
Confidence 999987775 99999999999999999999999999999999999 77776 44555544 6666
Q ss_pred HHHHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCC-----CCchhhhccchhHHHHHHHHHHHHhh
Q 014686 158 LFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGRE-----ATPKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 158 ~~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
+.+++ .++.++.++|+|++....+-++-+. |..+.. +++++++ +.-.+.+++||.+|.+.+..++....
T Consensus 193 iiaiival~~~~~~rd~Pqs~GLP~ie~~~~-d~~e~~----~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv 267 (448)
T COG2271 193 IIAIIVALILLFLLRDRPQSEGLPPIEEYRG-DPLEIY----EEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVV 267 (448)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCHHHhhc-Cchhhh----hhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 66665 4556677888887654432211111 111111 1111111 12356789999999999999999999
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHHHH
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
-.+...+.|.|+.+. .|++...++...+..=.+++++.+ +.+|++||. |||....+.+.+.....+...+..
T Consensus 268 R~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~L-l~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~ 341 (448)
T COG2271 268 RYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGTL-LAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA 341 (448)
T ss_pred HHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC
Confidence 999999999999887 899999999999999999999988 888888885 455444444333333333332322
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHH-HHHHhhhhhhHHHHhhhhccCCCC
Q 014686 310 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKAAGPAGGGALFSWAQKRLDASF 388 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~ 388 (420)
. . .+.....++.+..|+...+..-.......|..|.+..|++.|+...+..+ |.+.+....|.+.|..
T Consensus 342 ~--~-~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~-------- 410 (448)
T COG2271 342 P--N-GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW-------- 410 (448)
T ss_pred C--C-ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC--------
Confidence 1 1 12334445555555666666667778888999999999999999999999 9999999999998886
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 014686 389 LPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 389 ~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
||...|++..+.++++.++...
T Consensus 411 --gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 411 --GWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred --CCcchHHHHHHHHHHHHHHHHH
Confidence 8999999888877777666544
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.9e-35 Score=268.99 Aligned_cols=350 Identities=12% Similarity=0.047 Sum_probs=259.1
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+++|+|+|.++ .+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.+++++|++.++++|+++|
T Consensus 35 i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~G 108 (393)
T PRK09705 35 LRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGG 108 (393)
T ss_pred HHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHH
Confidence 46899999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.+...+. ..++.|++| ++|+++++.+..+.+.|..+++.+++++.++ ..+||..+ ...++.
T Consensus 109 ig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~~~~---------~~~~~~ 172 (393)
T PRK09705 109 VGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWYQTL---------AWWALP 172 (393)
T ss_pred hHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHHHHH---------HHHHHH
Confidence 999988887 888999987 7899999999999999999999999998872 12565443 233333
Q ss_pred HHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 160 AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
.++.....+...+++++++ ++ + +...++.+++++.+...+...+..........+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~--~~-------------------~---~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l 228 (393)
T PRK09705 173 AVVALFAWWWQSAREVASS--HK-------------------T---TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWL 228 (393)
T ss_pred HHHHHHHHHHHhcCCCccc--cC-------------------C---CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222222221111000 00 0 0112345667777776666666666666677778
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.++.+ +|.+..+++...+..+++.+++++ ..+++.||.++|+....+..+..++...+...+.. .....
T Consensus 229 p~~l~~------~g~s~~~ag~~~~~~~i~~i~g~~-~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~ 298 (393)
T PRK09705 229 PAFYIE------IGASAQYSGSLLALMTLGQAAGAL-LMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQ---LPVLW 298 (393)
T ss_pred HHHHHH------cCCChhhhhHHHHHHHHHHHHHHH-HHHHHHhhccchHHHHHHHHHHHHHHHHHHHccch---HHHHH
Confidence 877743 588999999999999999999988 67789999999988888776666665544332211 11111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
. .+.+.......+.......+.. |++++++..|+.+...++++.++|.+.|++.|..+ ++...|.+
T Consensus 299 ~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g---------~~~~~~~~ 365 (393)
T PRK09705 299 A----MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG---------NYLMDWAF 365 (393)
T ss_pred H----HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CchHHHHH
Confidence 1 1122333344555555555555 46789999999999999999999999999999973 57888888
Q ss_pred HHHHHHHHHHHHhhhhhhccCC
Q 014686 399 LNVVEAIGVLMTFKPFLAQRHD 420 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
.++++++..+..+. ..||++|
T Consensus 366 ~~~~~~~~~~~~~~-~~~~~~~ 386 (393)
T PRK09705 366 HALCVVGLMIITLR-FAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHH-hcccccc
Confidence 88877777666655 5666553
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7e-35 Score=280.91 Aligned_cols=385 Identities=17% Similarity=0.154 Sum_probs=273.7
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|++..+ .+++.+++.++.+++++++|+++||+|||+++++++++.+++.++++++++++.++++|++.|+
T Consensus 194 ~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~ 267 (742)
T TIGR01299 194 EKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGF 267 (742)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4678888888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccc----cCccchHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF----GKFPYFLPCLCI 156 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~----~~~~~~~~~~~~ 156 (420)
+.|...|. .+++.|++|+++|++.+++...+..+|.++++.++..+.. .+||+... ...+||..+++.
T Consensus 268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~-------~~G~~~~~g~~~~~~gWR~l~~i~ 340 (742)
T TIGR01299 268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP-------HYGWSFQMGSAYQFHSWRVFVIVC 340 (742)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hccchhccccccccccHHHHHHHH
Confidence 99888887 9999999999999999999999999999999999988876 56665322 245788888888
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCccc--chhHhhhhhh-----------------hh-hhh---h-hcCCC------
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESAS-----------------AE-VKE---E-EGREA------ 206 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~-~~~---~-~~~~~------ 206 (420)
+++.++.++..+++||+|++...+.+.++ +..+.+...+ .. .++ + ++...
T Consensus 341 ~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (742)
T TIGR01299 341 AFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRC 420 (742)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcc
Confidence 88877777778899999987433222111 1111110000 00 000 0 00000
Q ss_pred ------------CchhhhccchhHH---HHHHHHHHHHhhhhhHHHHHHHhhcCc-------------------------
Q 014686 207 ------------TPKKSLLKNWPLM---SSIIVYCVFSLHDMAYSEIFSLWANSP------------------------- 246 (420)
Q Consensus 207 ------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 246 (420)
...+++++.+..+ ...+.+++..+...+...++|..+...
T Consensus 421 ~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (742)
T TIGR01299 421 FVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFT 500 (742)
T ss_pred hhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccc
Confidence 0234455554433 333444555555566666777543210
Q ss_pred cc-----CC--------cc-------------------------------------------------------------
Q 014686 247 KK-----LG--------GL------------------------------------------------------------- 252 (420)
Q Consensus 247 ~~-----~~--------~~------------------------------------------------------------- 252 (420)
.. .. ++
T Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (742)
T TIGR01299 501 LENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNK 580 (742)
T ss_pred hhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccC
Confidence 00 00 00
Q ss_pred -CC---------chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 014686 253 -NY---------STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNC 322 (420)
Q Consensus 253 -~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
+. +.........+.+++.+++.+ +.+++.||+|||+++..+.++.+++.+++.+.... . .+.+
T Consensus 581 ~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~i-l~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~-----~-~ll~ 653 (742)
T TIGR01299 581 EGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNI-VSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSE-----S-AMIA 653 (742)
T ss_pred CccCccCCccchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccH-----H-HHHH
Confidence 00 001123345555677788877 78888889999999988888887777666543321 1 1222
Q ss_pred HHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHH
Q 014686 323 ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVV 402 (420)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~ 402 (420)
..++.+++..+..+....+++|.+|++.|++++|+.+....+|++++|.+.|.+.+.. ...+|++++++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-----------~~~pf~i~a~~ 722 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-----------KAAPILFASAA 722 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHH
Confidence 2233445556677888899999999999999999999999999999999999988753 45678888887
Q ss_pred HHHHHHHHhhhhhhccC
Q 014686 403 EAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 403 ~~~~~~~~~~~~~~~~~ 419 (420)
.+++.++.+. +||++
T Consensus 723 lll~~ll~~~--LPET~ 737 (742)
T TIGR01299 723 LACGGLLALK--LPDTR 737 (742)
T ss_pred HHHHHHHHHh--CCCCc
Confidence 7777666555 47754
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.4e-35 Score=271.91 Aligned_cols=367 Identities=14% Similarity=0.084 Sum_probs=254.6
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+++|+|+++++ .|++.+++.+++.+++++.|+++||+|||+++..++++.+++.+++++++|++.+++.|+++|
T Consensus 34 l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 107 (412)
T TIGR02332 34 MGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVG 107 (412)
T ss_pred hHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 46899999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.+...|. ..++.|++|+|+|++++++++.+.++|.++++.+++.+.+... .....|||+.| .+.++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~gwr~~f---------~~~~~~ 177 (412)
T TIGR02332 108 IAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG-LMALKGWQWLF---------LLEGFP 177 (412)
T ss_pred HHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCccchhHHH---------HHHHHH
Confidence 999998887 8899999999999999999999999999999999998874110 00134555554 666666
Q ss_pred HHHH-HHHHHhcccccCCCCCCCCccc-chhHhhhhhhhhhhh-hh--cCCC----CchhhhccchhHHHHHHHHHHHHh
Q 014686 160 AFGV-TIAAFWLPETLHRHNDDDDSCD-VSYDALESASAEVKE-EE--GREA----TPKKSLLKNWPLMSSIIVYCVFSL 230 (420)
Q Consensus 160 ~~~~-~~~~~~l~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
.++. .+.++++||+|++.+.-.++++ ...+..+....+.++ ++ ++++ ..++++ +++.++...+.+++...
T Consensus 178 ~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 256 (412)
T TIGR02332 178 SVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTN 256 (412)
T ss_pred HHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHH
Confidence 5543 4456678888764321111111 110111100000000 00 0001 112333 35777777777777777
Q ss_pred hhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHHHHHHHHHHH
Q 014686 231 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-ARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 309 (420)
......++.|.++.+. +.++++.+++.......++.+++.+ ..+++.||+++|+. .........+.... ....
T Consensus 257 ~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~l-~~g~l~dr~~~r~~~~~~~~~~~~~~~~~-~~~~ 330 (412)
T TIGR02332 257 TLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGMI-WWSRHSDRLKERKHHTALPYLFAAAGWLL-ASAT 330 (412)
T ss_pred HHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHHH-HHHHHhcccCccHHHHHHHHHHHHHHHHH-HHhc
Confidence 7777788899888652 1467788889888998999999887 88888988886654 33333333322211 1111
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCC
Q 014686 310 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFL 389 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 389 (420)
.. .... .... .....+.....+.......+..|+++|+++.|+.+...++|++++|.+.|.+.|..+
T Consensus 331 --~~-~~~~-~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g-------- 397 (412)
T TIGR02332 331 --DH-NLIQ-LLGI-IMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG-------- 397 (412)
T ss_pred --CC-HHHH-HHHH-HHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--------
Confidence 11 1111 1111 111111122233344455677899999999999999999999999999999999872
Q ss_pred CCchHHHHHHHHHHH
Q 014686 390 PGSQMVFFVLNVVEA 404 (420)
Q Consensus 390 ~g~~~~f~~~~~~~~ 404 (420)
+|+..+.+++++.+
T Consensus 398 -~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 398 -SFNSGLWFVAALLV 411 (412)
T ss_pred -CCchhHHHHHHHHh
Confidence 58888877766543
No 11
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.3e-34 Score=271.58 Aligned_cols=348 Identities=15% Similarity=0.092 Sum_probs=261.2
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+.+|+|.+.++ .+|+.+.+.+++..+.+++|+++||+|||++++.+..+..++++++++++|++.++++|+++|
T Consensus 32 i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G 105 (495)
T PRK14995 32 LSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLA 105 (495)
T ss_pred HHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 35789999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhh-Hhhhhhhc-hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
++.+...|. ...+.+.+ |+++|++++++.....++|..+||.+++++.+ .+|||+.| .+...
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-------~~gwr~~f---------~i~~~ 169 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-------HFYWGSVF---------LINVP 169 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------cCChHHHH---------HHHHH
Confidence 998888886 77776765 78999999999999999999999999999998 66777665 44443
Q ss_pred HHHH-HHHHHHhcccccCCCCCCCCcccchh---------Hhhhhh---h-h------------------hhhhhhcCCC
Q 014686 159 FAFG-VTIAAFWLPETLHRHNDDDDSCDVSY---------DALESA---S-A------------------EVKEEEGREA 206 (420)
Q Consensus 159 ~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~---------~~~~~~---~-~------------------~~~~~~~~~~ 206 (420)
..++ .++..+.+||++++++++.+...... ...++. . . ...|.+.+.+
T Consensus 170 ~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p 249 (495)
T PRK14995 170 IVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRP 249 (495)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3333 33455667876543222221111100 000000 0 0 0112222334
Q ss_pred CchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014686 207 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 286 (420)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (420)
....+++|+|.+....+..++..........+.|.|++.. +|+++.++|....+..+...++.+ +.+++.||++
T Consensus 250 ~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~ag~~~~~~~~~~~~~~~-~~g~l~~r~g 323 (495)
T PRK14995 250 MIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEAGMFMLPVMVASGFSGP-IAGILVSRLG 323 (495)
T ss_pred CcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcC
Confidence 4456789999988777777766666666666788887766 799999999999999999998887 7777888889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHH
Q 014686 287 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK 366 (420)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (420)
+|+.+..+..+..++...+.......+ .+. ......+.+++.....+.......+..|+++++.+.++.++.+++|+
T Consensus 324 ~~~~~~~g~~~~~~~~~~l~~~~~~~~--~~~-~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~ 400 (495)
T PRK14995 324 LRLVATGGMALSALSFYGLAMTDFSTQ--QWQ-AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA 400 (495)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCc--hHH-HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH
Confidence 988888777776666555443321111 111 22334444555566666677777788999999999999999999999
Q ss_pred HHhhhhhhHHHHh
Q 014686 367 AAGPAGGGALFSW 379 (420)
Q Consensus 367 ~~g~~~~g~l~~~ 379 (420)
.+|+.+.|.+++.
T Consensus 401 ~~G~ai~g~i~~~ 413 (495)
T PRK14995 401 GLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 12
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-34 Score=260.92 Aligned_cols=390 Identities=20% Similarity=0.202 Sum_probs=293.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFLL 79 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~ 79 (420)
+++|.+.++++.....+.+.+++.+|.++|+...|.++||+|||..+.++.++..++.++..+ .++++.++++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 566766677777888999999999999999999999999999999999999988888877766 47899999999999
Q ss_pred hhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
|+..|..... ..++.|..|++.||....+.+.+..+|..++..++.-- .+|- ...|...+....+
T Consensus 127 Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~---------ilGt-----~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 127 GLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPS---------LLGT-----EDLWPYLLAFPLI 192 (485)
T ss_pred HHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHH---------hcCC-----CcchHHHHHHHHH
Confidence 9999998887 99999999999999999999999999999987665322 2222 2335566677778
Q ss_pred HHHHHHHHHHhcccccCCCCCC-CCcccch--hH----------hhhhhhhhhhhhhc--CCCCchhhhccchhHHHHHH
Q 014686 159 FAFGVTIAAFWLPETLHRHNDD-DDSCDVS--YD----------ALESASAEVKEEEG--REATPKKSLLKNWPLMSSII 223 (420)
Q Consensus 159 ~~~~~~~~~~~l~e~~~~~~~~-~~~~~~~--~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 223 (420)
++++.++...++||||++.-.+ ++++++. .+ +.++..++.++++. ++..+.+++++|+..+....
T Consensus 193 ~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~ 272 (485)
T KOG0569|consen 193 PALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLL 272 (485)
T ss_pred HHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHH
Confidence 8888888899999999985442 2222221 11 11111111111111 25567889999988876544
Q ss_pred HHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014686 224 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
..+..... ..+....+.+.+......+.|+++.++.......++...+..+ ++.++.||.|||+++..+..++.+..+
T Consensus 273 i~~~v~~~-qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~-~~~~lid~~gRRpLll~~~~~~~~~~~ 350 (485)
T KOG0569|consen 273 IGIVVSFA-QQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTL-VSPFLIDRLGRRPLLLISLSLMAVALL 350 (485)
T ss_pred HHHHHHHH-HHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 43332222 1112222333333334444799999999999999999999988 888888999999999999988888776
Q ss_pred HHHHHHHhhhhH-HH---HHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 304 SYPYIAMLSGFG-LA---FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 304 ~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
.+.......... .| ..+.........+..+..|..+-+.+|++|++.|..++++...++.+..++-...+..+.+.
T Consensus 351 ~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~ 430 (485)
T KOG0569|consen 351 LMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNV 430 (485)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665544333222 12 22334444455667778899999999999999999999999999999999999999999998
Q ss_pred hhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccCC
Q 014686 380 AQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRHD 420 (420)
Q Consensus 380 ~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
. |. ..|+.+.+.+.+..++.++ ++||+|+
T Consensus 431 ~----------g~-~~filF~i~~~~~~i~~~~-~lPETkg 459 (485)
T KOG0569|consen 431 I----------GP-YVFILFVIPLAIFLIYLYR-YLPETKG 459 (485)
T ss_pred h----------cc-hhhHHHHHHHHHHHHHHHH-hCcccCC
Confidence 8 44 7888899999999888888 8999873
No 13
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.3e-34 Score=264.83 Aligned_cols=344 Identities=14% Similarity=0.117 Sum_probs=255.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|+|+++ .|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+++++|++.++++|++.|+
T Consensus 30 ~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 103 (377)
T TIGR00890 30 GRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASA 103 (377)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ...+.|++| |+|+++.++...+.++|..+++++.+.+.+ ..|||+ .+...++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~---------~f~~~~~~~ 166 (377)
T TIGR00890 104 GVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN-------LEGVPA---------AFIYMGIIF 166 (377)
T ss_pred HHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-------cccHHH---------HHHHHHHHH
Confidence 98877665 778888887 579999999999999999887777777766 345544 446666665
Q ss_pred HHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++..+ ..++++|+++++++++++ . +++....++.+|+|.++...+..++............
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (377)
T TIGR00890 167 LLVIVLGAFLIGYPPGQLIKTNIE-V-----------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLY 228 (377)
T ss_pred HHHHHHHHHheecCchhccccCcc-c-----------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHH
Confidence 55433 344455443321111100 0 0011234567788888776666555544444444444
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.|..+ .+.++.+.+...+...+..+++++ ..+++.||++||+.+..+.....++.......+.. ....
T Consensus 229 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 297 (377)
T TIGR00890 229 KPYGQS------LGLSDGFLVLAVSISSIFNGGGRP-FLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML---NDVL- 297 (377)
T ss_pred HHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc---hhHH-
Confidence 444322 578888889999998999999887 77888888899998888777777666555443221 1111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
......+.+.......+....+.+|.+|+++|+++.|+.+....+|..++|.+.|.+.|.. ||+..|.+.
T Consensus 298 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------g~~~~f~~~ 367 (377)
T TIGR00890 298 FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI----------GFEYTFIVT 367 (377)
T ss_pred HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh----------chhhHHHHH
Confidence 1122222233334445566778889999999999999999999999999999999999987 899999988
Q ss_pred HHHHHHHH
Q 014686 400 NVVEAIGV 407 (420)
Q Consensus 400 ~~~~~~~~ 407 (420)
+++.+++.
T Consensus 368 ~~~~~~~~ 375 (377)
T TIGR00890 368 GAFALTSL 375 (377)
T ss_pred HHHHHHhc
Confidence 88777654
No 14
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=2.2e-35 Score=250.77 Aligned_cols=360 Identities=38% Similarity=0.572 Sum_probs=274.0
Q ss_pred ccccccccccc--hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 3 KDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 3 ~~~~~s~~~~~--~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
++|+.-..+.+ ...+.|.+.+.+.+.+.+.++.+|.++||+|||+++.+|++..++...+.+.++||..++++|++.|
T Consensus 53 ~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~G 132 (451)
T KOG2615|consen 53 RDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGG 132 (451)
T ss_pred HHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444433334 7778999999999999999999999999999999999999999999999999999977778899999
Q ss_pred hhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 81 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 81 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+..|...++.++++|..++|+|+++++.++...++|.++||.+|+++.+. . ..++++++.++.++..+.+
T Consensus 133 i~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f--------~--~~~g~~p~alP~~~v~i~a 202 (451)
T KOG2615|consen 133 IFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQF--------S--SISGSYPFALPCLLVFILA 202 (451)
T ss_pred hccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhh--------H--hhhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999871 1 2233666777666666666
Q ss_pred HH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
.. .....+++||+-+.++++ ++.....+..++. .+..+.+.......+||++....+..+..+....+.+...+
T Consensus 203 ~~~v~~~~~~lpETL~~rk~~-~~~~~~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~ 277 (451)
T KOG2615|consen 203 AGDVTFFPWFLPETLPLRKRN-DEHSTLQEAADDR----LALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELF 277 (451)
T ss_pred HHHHHHHHHhCCccccchhhc-ccccchhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 66 556778999997665554 2211111111111 11111112223345677777666666666666667777777
Q ss_pred HHhhcCcccC--CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 240 SLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 240 ~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
+.|..+.... .++|+++.+.|.+++..++...+.+....+++.+..+. +..+.....++...++++.....
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~------ 351 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLART------ 351 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcccc------
Confidence 7776665544 66999999999999999999999998777777765444 33444444444444444433322
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhc
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 383 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 383 (420)
...+.+...+..+......+....++.+..|+++||++.|+......++.++||.+.|.+..+....
T Consensus 352 ~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~ 418 (451)
T KOG2615|consen 352 PVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGA 418 (451)
T ss_pred chhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCC
Confidence 2345666777777888888999999999999999999999999999999999999999999988644
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.5e-34 Score=266.48 Aligned_cols=336 Identities=15% Similarity=0.174 Sum_probs=239.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|.|+.+ .+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|+++|+
T Consensus 45 ~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 118 (426)
T PRK12307 45 KADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGM 118 (426)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..++.|++|+|+|+++.++...+.++|.++++.+.+.+.+ ..+||+.| .+..+..
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-------~~~w~~~f---------~i~~~~~ 182 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-------AYGWRAAF---------FVGLLPV 182 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc-------cCCHHHHH---------HHHHHHH
Confidence 98888887 8999999999999999999999999999999999988887 55666554 4433333
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHh---hhhhHHH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL---HDMAYSE 237 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 237 (420)
++........||++++.+++.++++ ++.++..+......++++|+|.++........... .......
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (426)
T PRK12307 183 LLVIYIRARAPESKEWEEAKLSGKG----------KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFG 252 (426)
T ss_pred HHHHHHHHHCCCChHHHHhhhhccc----------cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222223334544322111100000 00000001112245677888877654433322221 2223445
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA 317 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
+.|.|..+ .|+++.+.+...+...++.+++++ ..+++.||+++|+....+..+..+..+....... ... .
T Consensus 253 ~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 322 (426)
T PRK12307 253 LLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGNI-VWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ--DNY-L 322 (426)
T ss_pred HHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc--ccH-H
Confidence 66766643 478888899988888899999887 7788888889998888777665554443322211 111 1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 318 FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
......+..+....+..+.....+.|.+|+++||++.|+.+....+++.++|.+.|.+.+..
T Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 323 -LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred -HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 11111111111222334455667789999999999999999999999999999999999987
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.5e-34 Score=263.88 Aligned_cols=348 Identities=18% Similarity=0.127 Sum_probs=253.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.++++ .+++.+.+.++..+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|+
T Consensus 42 ~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 115 (406)
T PRK11551 42 AQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115 (406)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+ ..+||.. +.+.++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~---------~~~~~~~~ 179 (406)
T PRK11551 116 GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG-------DAAWRHI---------FYVGGVGP 179 (406)
T ss_pred hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------ccCHHHH---------HHHHHHHH
Confidence 98888887 9999999999999999999999999999999999988876 4455443 35554444
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhcc---chhHHHHHHHHHHHHhhhhhHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK---NWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
+.. .....++||++++.+++++++++. ...+..++ ++..+......++.........
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (406)
T PRK11551 180 LLLVPLLMRWLPESRAFAQAAGAGKQRA-------------------PVLRALFGEGRATATLLLWISYFFTLIVLYFLL 240 (406)
T ss_pred HHHHHHHHHhCCCChhHHhccCcchhhh-------------------hhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 433 344566788765432211100000 00011111 1222222233333333334444
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
.+.|.+..+ .|+++.+.+.......++.+++++ ..+++.||.++|+.+..+.....++...+..... .
T Consensus 241 ~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-----~ 308 (406)
T PRK11551 241 NWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGSL-LIGALMDRLRPRRVVLLIYAGILASLAALAAAPS-----F 308 (406)
T ss_pred HHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc-----H
Confidence 566666543 588999999999999999999987 7777888889988877765555544444333221 1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f 396 (420)
+ .+....++.++......+...++..|.+|+++|+++.|+.+....++..++|.+.|.+.+... ++...+
T Consensus 309 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~---------~~~~~~ 378 (406)
T PRK11551 309 A-GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR---------STVGVI 378 (406)
T ss_pred H-HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC---------chHHHH
Confidence 1 122333444455556677888899999999999999999999999999999999999998752 456666
Q ss_pred HHHHHHHHHHHHHHhh
Q 014686 397 FVLNVVEAIGVLMTFK 412 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~~ 412 (420)
.....+.+++.++.+.
T Consensus 379 ~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 379 GASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666666666555544
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.2e-33 Score=267.61 Aligned_cols=354 Identities=14% Similarity=0.107 Sum_probs=231.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHH--------HHHHHHHhhhhccchhhh-Hhh
Q 014686 22 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAY 92 (420)
Q Consensus 22 ~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~-~~~ 92 (420)
.++.++++.+++++.|+++||+|||+++..++++++++++++++++|++. ++++|+++|++.|...+. .++
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 58888999999999999999999999999999999999999999999875 889999999999988887 999
Q ss_pred hhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhccc
Q 014686 93 ACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 172 (420)
Q Consensus 93 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 172 (420)
++|++|+|+|+++.++...+..+|..+|+.+...+...... .. ...++||.++.+.+++.++.++....+||
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~-------~~-~~~~gWR~~f~i~~~~~l~~~~~~~~~~e 214 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGE-------AN-FLDWGWRIPFFIALPLGIIGLYLRHALEE 214 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------HH-hcCccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999988888988888776555421000 00 00234555556666555555555677888
Q ss_pred ccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccc-hhHHH-HHHHHHHHHhhhhhHHHHHHHhhcCcccCC
Q 014686 173 TLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLG 250 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (420)
+|++.+.+++.++.. .++.+++++.+.++++++ ++.+. .....++..........+.|.|+.+.
T Consensus 215 sp~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~---- 280 (490)
T PRK10642 215 TPAFQQHVDKLEQGD----------REGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN---- 280 (490)
T ss_pred ChhHHHHHHhhhhhc----------cccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 876432111000000 000001112234555543 22222 22222333344455556777777544
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
+|++..+.+.......++..++.+ ..+++.||+|||+.+..+.+...+............ . ...+....++.++.
T Consensus 281 -~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g~~ 355 (490)
T PRK10642 281 -LHYSEDHGVLIIIAIMIGMLFVQP-VMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN--V-IGLIFAGLLMLAVI 355 (490)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC--C-HHHHHHHHHHHHHH
Confidence 678877777777776777777766 778899999999988777654333222211111111 1 11122222222233
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.............+.+|++.|+++.|+.+....+++.++|.+.+++.+..+ ++..++++.....+++.+..
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~---------~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ---------NLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CchHHHHHHHHHHHHHHHHH
Confidence 334445566677788999999999998777777888999999999988652 34555555555555554444
Q ss_pred h
Q 014686 411 F 411 (420)
Q Consensus 411 ~ 411 (420)
+
T Consensus 427 ~ 427 (490)
T PRK10642 427 V 427 (490)
T ss_pred H
Confidence 3
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.8e-33 Score=257.59 Aligned_cols=338 Identities=17% Similarity=0.184 Sum_probs=249.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.++++ .++..+++.++..+++++.|+++||+|||++++.+.++.+++.+++.+++|++.+++.|+++|+
T Consensus 47 ~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 120 (394)
T PRK10213 47 AQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGL 120 (394)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...|. .+++.|++|+|+|++++++...+.++|..++|++++.+.+ .+|||+.| ...++..
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f---------~~~~~l~ 184 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-------LIGWRNVF---------NAAAVMG 184 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCHHHHH---------HHHHHHH
Confidence 99988887 9999999999999999999999999999999999999998 56666555 4444444
Q ss_pred HHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++.. ......||+++++++ .....++.+|+|.++...+..++..........+.
T Consensus 185 ~~~~l~~~~~~p~~~~~~~~-------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (394)
T PRK10213 185 VLCIFWIIKSLPSLPGEPSH-------------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYI 239 (394)
T ss_pred HHHHHHHHHHCCCCCccccc-------------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4332 233445664321100 00123467888888876665555444444444444
Q ss_pred -HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH-HHHHHHHHHHHHHhhhhHHH
Q 014686 240 -SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL-TIPLLTSYPYIAMLSGFGLA 317 (420)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 317 (420)
|.+.. . .|+++.+.+......+++.++++. +.+++.||.+ ++.......+ ......+..... ..+
T Consensus 240 ~p~~~~-~-----~g~s~~~~g~~~~~~~~~~iig~~-~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~-----~~~ 306 (394)
T PRK10213 240 RPVYMN-L-----AGFGVDGLTLVLLSFGIASFVGTS-LSSFILKRSV-KLALAGAPLVLAVSALVLTLWGS-----DKI 306 (394)
T ss_pred HHHHHH-h-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhh-----hHH
Confidence 44432 2 689999999999998999999987 6677777744 4443333333 222222222211 112
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHH
Q 014686 318 FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFF 397 (420)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~ 397 (420)
.+....++.++......+...+.+.+..| +++++..+......++|..+||.++|.++|.. |+...+.
T Consensus 307 -~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~----------g~~~~~~ 374 (394)
T PRK10213 307 -VATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI----------GLTSPLM 374 (394)
T ss_pred -HHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------ChhhHHH
Confidence 22233444455556677777777888776 66778888888888999999999999999987 7888888
Q ss_pred HHHHHHHHHHHHHh
Q 014686 398 VLNVVEAIGVLMTF 411 (420)
Q Consensus 398 ~~~~~~~~~~~~~~ 411 (420)
..+++.++..+...
T Consensus 375 ~~~~~~~~~~~~~~ 388 (394)
T PRK10213 375 LSGTLMLLTALLVT 388 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 87776665554443
No 19
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1.6e-33 Score=268.85 Aligned_cols=366 Identities=16% Similarity=0.177 Sum_probs=257.0
Q ss_pred Cccccccc---ccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 014686 1 MIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 77 (420)
Q Consensus 1 i~~~~~~s---~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 77 (420)
+++|+|++ +.+ .+++.+++.++..+++++.|+++||+|||++++++.++..++.++.++++|++.+++.|+
T Consensus 115 i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~ 188 (505)
T TIGR00898 115 IVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRL 188 (505)
T ss_pred EEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 35788888 666 899999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
+.|++.+...+. ..++.|++|+++|+++.++...+..+|.+++|.++..+.+ ||..+.+.
T Consensus 189 l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~~~~~~ 249 (505)
T TIGR00898 189 LVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRWLQLAV 249 (505)
T ss_pred HHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHHHHHHH
Confidence 999999998887 9999999999999999999999999999999998866542 44445666
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccc--hhHhhhhhh----------h--hhhhhhcCCCCchhhhccchhHHHHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDV--SYDALESAS----------A--EVKEEEGREATPKKSLLKNWPLMSSI 222 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~--~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (420)
+++.++..+..+++||+|++...+++.++. ..++..+.+ . ++++++++++...++++|+|.++...
T Consensus 250 ~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 329 (505)
T TIGR00898 250 SLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTT 329 (505)
T ss_pred HHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHH
Confidence 676666666668899998764333222111 111111000 0 00001111234677889999887766
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014686 223 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+......+.........+.+. ...+.+.. ......++..+++.+ +..++.||+|||+.+..+.++..++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~i~~~~-~~~~l~dr~grr~~~~~~~~~~~~~~ 399 (505)
T TIGR00898 330 LCLMMLWFTTAFSYYGLVLDL------GNLGGNIY---LDLFISGLVELPAKL-ITLLLIDRLGRRYTMAASLLLAGVAL 399 (505)
T ss_pred HHHHHHHHHHHHHHHHHhccc------cccCCChH---HHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 655443332222211122222 12344433 223344566666666 67788888999999888887777766
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhh
Q 014686 303 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 382 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 382 (420)
+......... .+ ......++..++.....+..+.+.+|.+|++.|+++.|+.+....+|++++|.+.+ +.+ .
T Consensus 400 l~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~-- 471 (505)
T TIGR00898 400 LLLLFVPVDL---YF-LRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE-K-- 471 (505)
T ss_pred HHHHHcCCCc---hH-HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-H--
Confidence 6554433211 11 12222333334455666778889999999999999999999999999999999998 433 3
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 383 RLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 383 ~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
+...++.+.+++.+++.++... .||++
T Consensus 472 --------~~~~~~~~~~~~~~~~~~~~~~--lpet~ 498 (505)
T TIGR00898 472 --------WLFLPLVLFGGLALLAGILTLF--LPETK 498 (505)
T ss_pred --------HHhhHHHHHHHHHHHHHHHHHc--CcCCC
Confidence 4566777777777777666544 45544
No 20
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.9e-33 Score=263.87 Aligned_cols=371 Identities=12% Similarity=0.040 Sum_probs=248.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV----NFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l 78 (420)
++ |.|+++ .+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+.+++++ +++.+++.|++
T Consensus 57 ~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l 129 (452)
T PRK11273 57 EQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL 129 (452)
T ss_pred Hc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHH
Confidence 45 888888 99999999999999999999999999999999999999999999888763 78889999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHH-HHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
.|++.+...|. ...+.|++|+|+|++++++.+.+.++|.. .+|+++..+.. ..|||+. +.+.
T Consensus 130 ~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-------~~gw~~~---------f~i~ 193 (452)
T PRK11273 130 CGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-------FNDWHAA---------LYMP 193 (452)
T ss_pred HHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-------hccHHHH---------HHHH
Confidence 99998887775 78889999999999999999999999874 45554433333 2345443 4555
Q ss_pred HHHHHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCc-hhhhccchhHHHHHHHHHHHHhhhhh
Q 014686 157 SLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSLLKNWPLMSSIIVYCVFSLHDMA 234 (420)
Q Consensus 157 ~~~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
++..++ .++..+++||++++...+++++.+ ++..+..+++++++.+.++. .+.++|++.+|...+..++.......
T Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 271 (452)
T PRK11273 194 AFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYG 271 (452)
T ss_pred HHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 554444 345566778876543221111100 00000000000000000111 12467889998888877777766667
Q ss_pred HHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh--chHHHHH-HHHHHHHHHHHHHHHHHHh
Q 014686 235 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMVAR-IAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~ 311 (420)
...++|.|+.+. .|++..+++....+..++.+++.+ +.+++.||+ +||.... ....+..++...+....
T Consensus 272 ~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~-- 343 (452)
T PRK11273 272 ILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP-- 343 (452)
T ss_pred HHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc--
Confidence 777899888765 688888888888888888888877 778888887 4443222 22222222222221111
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHH-hhhhhhHHHHhhhhccCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA-GPAGGGALFSWAQKRLDASFLP 390 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~~~~~~~~~~~ 390 (420)
.. ..+. ..+.....+...............|..|++.||++.|+.+...++|+.+ +|.+.|.+.|..
T Consensus 344 ~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~---------- 411 (452)
T PRK11273 344 AG-NPTV-DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF---------- 411 (452)
T ss_pred cc-ChHH-HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh----------
Confidence 11 1111 1111222222222222333455678899999999999999999998765 799999999998
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 391 GSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 391 g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
|++..|.+++.+++++.+.......+|+
T Consensus 412 g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 412 GWDGGFMVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999888888887666654234443
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.7e-33 Score=257.37 Aligned_cols=342 Identities=17% Similarity=0.219 Sum_probs=244.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|.+.++ .|++.+.+.+++.++++++|+++||+|||+++..+..+.+++.+++++++|++.+++.|+++|+
T Consensus 30 ~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 103 (382)
T PRK10091 30 AHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGF 103 (382)
T ss_pred HHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..++.|++|+++|+++++....+..+|..++|++++.+.+ ..|||+.| .+.++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f---------~~~~~~~ 167 (382)
T PRK10091 104 PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ-------EFSWRYTF---------LLIAVFN 167 (382)
T ss_pred hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh-------hccHHHHH---------HHHHHHH
Confidence 98887777 8889999999999999999999999999999999999987 55665544 5555544
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++. +...+.+||.+++++. +. +...+.+|+++.+.......+.........++.
T Consensus 168 ~~~~~~~~~~lp~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK10091 168 IAVLASIYFWVPDIRDEAKG------GL-------------------REQFHFLRSPAPWLIFAATMFGNAGVFAWFSYI 222 (382)
T ss_pred HHHHHHHHHhCCCCCccccc------CH-------------------HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443 3344567775321100 00 001234566666655444433332223333344
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.+..+. .|+++.+.+...+..+++.+++++ ..+++.||+++++....+..+..++.+........ . +..
T Consensus 223 ~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~--~--~~~ 292 (382)
T PRK10091 223 KPYMMFI-----SGFSETSMTFIMMLVGLGMVLGNL-LSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGM--K--TAS 292 (382)
T ss_pred HHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhH-HHheeccccCchhHHHHHHHHHHHHHHHHHHHHhh--H--HHH
Confidence 4444433 689999999999999999999988 77788888899888887777666665444332211 1 111
Q ss_pred HHHHHHHHHhhhHHHHH-HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 320 LNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
. ......+.+.....+ .......+..|++.++.+. .+...++|.++||.+.|.+.|... +|+..+.+
T Consensus 293 ~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~---------~~~~~~~~ 360 (382)
T PRK10091 293 L-IFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGL---------AYNYVALP 360 (382)
T ss_pred H-HHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHccc---------CcchHHHH
Confidence 1 111111222222223 3334445545556666554 467789999999999999999752 78888888
Q ss_pred HHHHHHHHHHHHhh
Q 014686 399 LNVVEAIGVLMTFK 412 (420)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (420)
.+++.++.......
T Consensus 361 ~~~~~~~~~~~~~~ 374 (382)
T PRK10091 361 AALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 87776666554444
No 22
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.8e-33 Score=259.74 Aligned_cols=346 Identities=14% Similarity=0.112 Sum_probs=230.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhhhccchhhh-
Q 014686 19 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI- 89 (420)
Q Consensus 19 g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~- 89 (420)
+.+.+..+++..++++++|+++||+|||+++..+.++++++++++++++++. .+++.|+++|++.|...|.
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~ 145 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTS 145 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH
Confidence 3444556666679999999999999999999999999999999999988764 5889999999999998887
Q ss_pred HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHh
Q 014686 90 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 169 (420)
Q Consensus 90 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (420)
.+++.|++|+|+|+++.++...+...|..+++.+...+.... +... ...++||.++.+.+++.++.......
T Consensus 146 ~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-------~~~~-~~~~gWr~~F~i~~~~~ll~~~~~~~ 217 (432)
T PRK10406 146 ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTL-------EDAE-LREWGWRIPFALGAVLAVVALWLRRQ 217 (432)
T ss_pred HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CHHH-HhccchHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999888888888887765554210 0000 00334566667777766665555555
Q ss_pred cccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHH-HhhhhhHHHHHHHhhcCccc
Q 014686 170 LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKK 248 (420)
Q Consensus 170 l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 248 (420)
+||+++++++ ++++..+.++++|+|+.+...+...+. .........+.|.|+.+.
T Consensus 218 ~~e~~~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-- 273 (432)
T PRK10406 218 LDETSQQETR----------------------ALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-- 273 (432)
T ss_pred CCCCchHHHh----------------------hhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 6665432110 000112466788888877655544432 444455667788777554
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 328 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
.|++..+.+...+...+...+++. +.+++.||.+||+.......+..+....+........ .....+ ....+..
T Consensus 274 ---~g~s~~~~~~~~~i~~~~~~i~~~-~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 347 (432)
T PRK10406 274 ---AGMHANVASGIMTAALFVFMLIQP-LIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVS-SPYAAF-GLVMCAL 347 (432)
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCC-cHHHHH-HHHHHHH
Confidence 688888888888887888788877 5578899999988776655543322221111111001 111111 1111111
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHH-HHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL-FKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
+......+....+.+|.+|++.|+++.|+.+...++ .+...|.+.+.+ +..+ .+...++..++..+++.
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g---------~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIG---------METAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC---------CCcHHHHHHHHHHHHHH
Confidence 122233345667889999999999999999988764 344577777744 5441 35556666666666665
Q ss_pred HHHhh
Q 014686 408 LMTFK 412 (420)
Q Consensus 408 ~~~~~ 412 (420)
+..+.
T Consensus 418 ~~~~~ 422 (432)
T PRK10406 418 LVSLM 422 (432)
T ss_pred HHHHH
Confidence 55544
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.6e-33 Score=258.13 Aligned_cols=331 Identities=16% Similarity=0.085 Sum_probs=251.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-----NFWMAVLTRF 77 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~ 77 (420)
+|++.++.+ .+++.+++.++..+++++.|+++||+|||++++.+.++..++.++..+++ +++.+++.|+
T Consensus 27 ~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (365)
T TIGR00900 27 LAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAG 100 (365)
T ss_pred HHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 456777788 99999999999999999999999999999999999999999998888887 9999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
++|++.+...+. .+++.|++|+++|++++++.+.+..+|.+++|.+++.+.+ ..|||..| ...
T Consensus 101 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~g~~~~~---------~~~ 164 (365)
T TIGR00900 101 ILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA-------TLGIKWAI---------WVD 164 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-------HhhHHHHH---------HHH
Confidence 999999998887 9999999999999999999999999999999999999987 45555443 555
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
++..++..+..+.+++++++++++++.+++. .++..+..++++|+|.++...+..++.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAI 230 (365)
T ss_pred HHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 5444443333333322211111111000000 00011234567888888877776666665554444
Q ss_pred -HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 014686 237 -EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG 315 (420)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
.+.|.|..+. +|.++.+.+......+++.+++.+ ..+++.||.++++....+..+..+..........
T Consensus 231 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 299 (365)
T TIGR00900 231 VALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGAL-LLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP----- 299 (365)
T ss_pred HHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-----
Confidence 5677776544 688999999999999999988887 6678889889888887776655555554443321
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
......+..++.+++.....+....+..|..|+++|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 12233344555566667778888899999999999999999999999999999999999999875
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.6e-33 Score=261.93 Aligned_cols=347 Identities=15% Similarity=0.149 Sum_probs=240.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.++.+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus 39 ~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 112 (405)
T TIGR00891 39 AGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGI 112 (405)
T ss_pred HHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+++|++++++...+..+|.++++.+++.+.+ ..+ .+|+..+.+.++..
T Consensus 113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~-------~~~-------~~w~~~f~~~~~~~ 178 (405)
T TIGR00891 113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP-------VWG-------DGWRALFFISILPI 178 (405)
T ss_pred hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcC-------ccHHHHHHHHHHHH
Confidence 99988887 9999999999999999999999999999999999999886 222 12444445555555
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhh---hhhhcCCCCchhhhcc-chh-HHHHHHHHHHHHhhhhhH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV---KEEEGREATPKKSLLK-NWP-LMSSIIVYCVFSLHDMAY 235 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 235 (420)
++.++....+||+++++++++++++ ..+..++..+++ ++..++.....++..+ ++. +........+........
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (405)
T TIGR00891 179 IFALWLRKNIPEAEDWKEKHAGKAL-VRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPI 257 (405)
T ss_pred HHHHHHHHhCCCChhHHHHhhhhhh-hhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 5555555667876543222111110 001100000000 0000000000111111 111 122222222223333344
Q ss_pred HHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 014686 236 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG 315 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
..++|.|..+. .|++..+.+.+.+...++.+++.+ ..+++.||+++|+.+..+.............. .. .
T Consensus 258 ~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~--~ 327 (405)
T TIGR00891 258 QDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGGC-VFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI--GA--N 327 (405)
T ss_pred hhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh--CC--c
Confidence 45566666544 789999999999999999999987 77788888899988877765543322221111 11 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
.+. ......+.++......+......+|..|+++|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 328 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 391 (405)
T TIGR00891 328 VAV-LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRL 391 (405)
T ss_pred hHH-HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 2222222333444556667778899999999999999999999999999999999999988
No 25
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.7e-34 Score=263.68 Aligned_cols=346 Identities=16% Similarity=0.121 Sum_probs=245.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.|+++ .+++.+++.++..+++++.|+++||+|||+++..+.++..++.++.+++++++.+++.|++.|+
T Consensus 22 ~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 95 (379)
T TIGR00881 22 VEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGI 95 (379)
T ss_pred HHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHH-HHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
+.+...+. .+++.|++|+|+|++++++.+.+.++|..++| .+++.+.+ ..+||..| ...++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~~~~~~~~---------~~~~~~ 159 (379)
T TIGR00881 96 FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-------LYSWHWVF---------IVPGII 159 (379)
T ss_pred hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-------cCCchhHH---------HHHHHH
Confidence 99988887 99999999999999999999999999999999 46666665 44555443 555544
Q ss_pred HHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.++ .++..+..||++++++.++++++.. ++.++..++++++.++.+...++++|+|.++...+..++..........+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDW 238 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 444 3445556677655432221111111 00000000011111112223566788999888877777777766777778
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHH--HHHHHHHHHHHHHHhhhhH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGV--LTIPLLTSYPYIAMLSGFG 315 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 315 (420)
.|.|..+. .|+++.+.+...+...++.+++.+ +.+++.||. ++++....... .............. . .
T Consensus 239 ~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~ 309 (379)
T TIGR00881 239 SPLYLTQE-----KGFSKEKASWAFTLYELGGLVGTL-LAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPA--A-N 309 (379)
T ss_pred HHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhHH-HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcc--h-h
Confidence 88887655 789999999999999999999888 666666654 33332221111 11111111111001 1 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
........+..+.......+......+|..|+++|+++.|+.+....+++.++|.+.|.+.|..
T Consensus 310 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 310 -PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred -HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 1112222333333344445556677889999999999999999999999999999999999987
No 26
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.5e-32 Score=256.34 Aligned_cols=350 Identities=14% Similarity=0.119 Sum_probs=235.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhhhccchhhh-Hhhh
Q 014686 23 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYA 93 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i 93 (420)
++.++++.+++++.|+++||+|||+++..+..+++++++++++++|++ .++++|+++|++.|...|. ..++
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~ 150 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLA 150 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 456677889999999999999999999999999999999999999987 5888999999999998887 9999
Q ss_pred hhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccc
Q 014686 94 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 173 (420)
Q Consensus 94 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~ 173 (420)
.|++|+|+|++..+....+..+|.++++.+...+...... + .+..++||.++++.+++.++........||+
T Consensus 151 ~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~------~--~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es 222 (438)
T PRK09952 151 VESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTD------E--QFLSWGWRIPFLFSIVLVLIALWVRNGMEES 222 (438)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH------H--HhhccChHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998877776531110 0 0013456666677766655544445556776
Q ss_pred cCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHH-HHHHHHhhhhhHHHHHHHhhcCcccCCcc
Q 014686 174 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGL 252 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
+++.+++++.++ ++++....+.++|+|+.+.... ..++..........+.|.|..+. +
T Consensus 223 ~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~ 281 (438)
T PRK09952 223 AEFEQQQHEQAA----------------AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----L 281 (438)
T ss_pred hhHHHHHhhccc----------------ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 643221100000 0001111223556666655443 23333333444555677766544 6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSV 332 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
|++...........++...++.+ +.+++.||++||+....+.++..+....+...... . .....+....++.++...
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~-~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~~~ 358 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIP-CFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA-Q-SIFWIVFFSIMLANIAHD 358 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc-C-ChHHHHHHHHHHHHHHHH
Confidence 77776555555555666666665 67889999999988877765544433322221111 1 111112222233334444
Q ss_pred HHHHHHHHHhhhcCCcchhhHHhhHHHHHH-HHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 333 SIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
...+..+++..|.+|++.|+++.|+.+... .+++.++|.+.+.+.|..++ +|...+...+++.+++.+..+
T Consensus 359 ~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~--------~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 359 MVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGG--------SWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CchHHHHHHHHHHHHHHHHHH
Confidence 556777889999999999999999976665 58999999999999986521 477778877777777766655
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 431 ~ 431 (438)
T PRK09952 431 L 431 (438)
T ss_pred H
Confidence 4
No 27
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.5e-32 Score=260.76 Aligned_cols=386 Identities=14% Similarity=0.075 Sum_probs=245.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh------------hhHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS------------VNFW 70 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~------------~~~~ 70 (420)
++++.++.+ .+++.+++.++..++++++|+++||+|||++++.+.+++.++.+.++++ ++++
T Consensus 48 ~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
T PRK10077 48 LSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVP 121 (479)
T ss_pred ccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 345777788 9999999999999999999999999999999999999999998887763 2356
Q ss_pred HHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccccc-CCccccccccccCcc
Q 014686 71 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK-YPNLFSSESLFGKFP 148 (420)
Q Consensus 71 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~-~~~~~gw~~~~~~~~ 148 (420)
.++++|+++|++.|...|. .++++|++|+|+|++++++.+.+..+|.++++.+++.+...... ... .++
T Consensus 122 ~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~---------~~g 192 (479)
T PRK10077 122 EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLN---------TDG 192 (479)
T ss_pred HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc---------cCC
Confidence 7889999999999998887 99999999999999999999999999999998887766531110 001 234
Q ss_pred chHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccc--hhHhhhhhhh------hhhhhhcCCCCchhhhccchhHHH
Q 014686 149 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV--SYDALESASA------EVKEEEGREATPKKSLLKNWPLMS 220 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 220 (420)
||.++...++..++..+..+++||+|++...++++++. ..++.....+ +..+..+++....+..+... ...
T Consensus 193 Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 271 (479)
T PRK10077 193 WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFG-VGV 271 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchh-HHH
Confidence 55555676666666666677889988653222111111 0000000000 00000000000001111100 000
Q ss_pred HHHHHHHHHhhhh----hHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 014686 221 SIIVYCVFSLHDM----AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 296 (420)
Q Consensus 221 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (420)
.........+... ....+.|.+.. +.|.+....+......++..+++.+ +.+++.||++||+.+..+..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~------~~g~~~~~~~~~~~~~~~~~~i~~~-~~g~l~dr~g~r~~~i~~~~ 344 (479)
T PRK10077 272 IVIGVMLSVFQQFVGINVVLYYAPEIFK------TLGASTDIALLQTIIVGVINLTFTV-LAIMTVDKFGRKPLQIIGAL 344 (479)
T ss_pred HHHHHHHHHHHHHhChhHHHHHHHHHHH------HcCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHhcChHHHHHhHH
Confidence 1100001011000 11112233322 2577776667777777788888876 77788889999999998888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 297 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
+..++.+.+...........+ ...........+.....|..+.+++|.+|+++|+++.|+.+...+++..+++.+.+.+
T Consensus 345 ~~~v~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 345 GMAIGMFSLGTAFYTQAPGIV-ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred HHHHHHHHHHHHHhcCcccHH-HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 887776665443221111111 1111122111222233477889999999999999999999999999999998887655
Q ss_pred HHh--hhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 377 FSW--AQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 377 ~~~--~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.+. ..+. .++...|++.+++++++.++.+. ..||+|
T Consensus 424 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~ 461 (479)
T PRK10077 424 DKNSWLVAH------FHNGFSYWIYGCMGVLAALFMWK-FVPETK 461 (479)
T ss_pred Hhccchhhh------ccCccHHHHHHHHHHHHHHHHHh-ccccCC
Confidence 521 0000 16677888888777777766655 455543
No 28
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.6e-33 Score=265.34 Aligned_cols=390 Identities=15% Similarity=0.119 Sum_probs=245.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHhhhhccchhhh-H
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-K 90 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~-~ 90 (420)
.+++.+.+.+++.++++++|+++||+|||+++..+.++..++.++++++++ ++.++++|+++|++.|...+. .
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 789999999999999999999999999999999999999999999888765 789999999999999988886 9
Q ss_pred hhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccccc-CCcc-----ccccc--cccCccchHHHHHHHHHHHH
Q 014686 91 AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK-YPNL-----FSSES--LFGKFPYFLPCLCISLFAFG 162 (420)
Q Consensus 91 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~-~~~~-----~gw~~--~~~~~~~~~~~~~~~~~~~~ 162 (420)
.+++|++|+|+|++++++......+|..+++.++..+...... +... ..++. .. .++||.++.+.+++.++
T Consensus 138 ~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~WR~~~~~~~ip~~i 216 (502)
T TIGR00887 138 IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAV-DYMWRILIGFGAVPALL 216 (502)
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchh-cccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998876531100 0000 00110 11 34688888888888887
Q ss_pred HHHHHHhcccccCCCCCCCCcccchhHhhhhh---h-h-hhhh------hhcCCCCchhhhccc---hhHHHHHHH----
Q 014686 163 VTIAAFWLPETLHRHNDDDDSCDVSYDALESA---S-A-EVKE------EEGREATPKKSLLKN---WPLMSSIIV---- 224 (420)
Q Consensus 163 ~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~---~-~-~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~---- 224 (420)
..+..+++||+|++...+++++++..+...+. + + +.++ +++.....+++++++ ++.+...+.
T Consensus 217 ~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (502)
T TIGR00887 217 ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGS 296 (502)
T ss_pred HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHH
Confidence 77778899999997432222211111111110 0 0 0000 001111245566653 222121111
Q ss_pred HHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHH-----------H-HHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Q 014686 225 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG-----------E-VLAITGFSLLVFQLSLYPFLERILGPIMVAR 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (420)
.+.......+...+.|.++.. .|+++...+ . ......++.+++.+ +..++.||+|||+.+.
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~l~dr~gRR~~l~ 369 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILSA------IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYW-VTVFLVDIIGRKPIQL 369 (502)
T ss_pred HHHHHHHHHccccccHHHHHH------HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhcchhHHH
Confidence 111111111222223333321 344432211 1 12222334444544 7788999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhh
Q 014686 293 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 372 (420)
.+..+..++................. ........+...+..+..+.+.+|.+|++.|+++.|+.+.++.++++++|.+
T Consensus 370 ~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~ 447 (502)
T TIGR00887 370 MGFFILTVLFFVLGFAYNHLSTHGFL--AIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFG 447 (502)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhHHH--HHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHH
Confidence 87766666555444322111111111 1111111122333455667778999999999999999999999999999999
Q ss_pred hhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 373 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 373 ~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.+.+.+..+.+.+.....++...|.+++++++++.++. + +.||++
T Consensus 448 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~-~lpEt~ 492 (502)
T TIGR00887 448 FLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-L-LIPETK 492 (502)
T ss_pred hhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-e-EeccCC
Confidence 99998853211000000145667888888887776654 3 457755
No 29
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.7e-33 Score=266.20 Aligned_cols=367 Identities=17% Similarity=0.145 Sum_probs=248.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHhhhhccchhhh-Hhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYA 93 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~-~~~i 93 (420)
.+++.+++.++..++++++|+++||+|||++++.+.++..++.+++.++ .+++.+++.|+++|++.+...+. .+++
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 152 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYL 152 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHH
Confidence 9999999999999999999999999999999999999999999988654 44568999999999999988887 9999
Q ss_pred hhhchhhhhhhHHHHHHHHhHHHHHHHHHHH---hHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 014686 94 CEIFREEHQALGLSTVSTAWGIGLIIGPALG---GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 170 (420)
Q Consensus 94 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (420)
.|++|+++|++++++.+.+.++|..+++.++ ....+ ..+|| ..+.+.++..++.++..+++
T Consensus 153 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-------~~~w~---------~~f~~~~~~~~~~~~~~~~l 216 (481)
T TIGR00879 153 SEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-------TLGWR---------IPLGLQLIPAGLLFLGLFFL 216 (481)
T ss_pred HccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-------CccHH---------HHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999998 54444 34444 44466555555555666778
Q ss_pred ccccCCCCCCCCcccc--hhHhh-----------h---hhhhhhhhhhcCCCCchhhhccc------hhHHHHHHHHHHH
Q 014686 171 PETLHRHNDDDDSCDV--SYDAL-----------E---SASAEVKEEEGREATPKKSLLKN------WPLMSSIIVYCVF 228 (420)
Q Consensus 171 ~e~~~~~~~~~~~~~~--~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 228 (420)
||+++....+++.++. ..++. + ......+.+.+.....+.+.++. +.++...+..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (481)
T TIGR00879 217 PESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQ 296 (481)
T ss_pred CCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 8886532111111110 00000 0 00000000001111112333321 1222222222222
Q ss_pred HhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014686 229 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
.........+.|.+... .|++..+.+.......++.+++.+ +.+++.||.++|+.+..+..+..++.+.+...
T Consensus 297 ~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (481)
T TIGR00879 297 FTGINAIMYYSPTIFEN------AGVSTDHAFLVSIIVGAVNFAFTF-VAIFLVDRFGRRPLLLIGAAGMAICLFVLGIL 369 (481)
T ss_pred HhCCeehHHHHHHHHHH------cCCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 22222233344444322 578888888888888888888887 67888888999998888877666665555422
Q ss_pred HHhhhh-----HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhc
Q 014686 309 AMLSGF-----GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 383 (420)
Q Consensus 309 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 383 (420)
...... .....+....+..+.......+....+..|.+|+++|+++.|+.+...+++++++|.+.+.+.+..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--- 446 (481)
T TIGR00879 370 GASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI--- 446 (481)
T ss_pred hhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 111111 022222223333333444455667778899999999999999999999999999999999999986
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 384 LDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 384 ~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
++...|++.+++++++.++.+. ..||+
T Consensus 447 -------~~~~~f~~~~~~~~~~~i~~~~-~~~~~ 473 (481)
T TIGR00879 447 -------GVGGVFIFFGGLNVLGLIFVYF-FLPET 473 (481)
T ss_pred -------CccceehhHHHHHHHHHHHHhe-ecccC
Confidence 7888899988888888777665 44443
No 30
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=3.2e-32 Score=252.26 Aligned_cols=336 Identities=19% Similarity=0.163 Sum_probs=236.4
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh--------hhHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--------VNFWMAV 73 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~--------~~~~~l~ 73 (420)
++++|.|+.+ .|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.+.+.++ .+++.++
T Consensus 43 ~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 43 HDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence 4788999999 9999999999999999999999999999999999999888877766553 2577899
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+.|+++|++.+...+. .+++.|++|+|+|++++++...+..+|.++||.+++.+.+ .+||+. .
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~g~~~---------~ 180 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH-------WGGLAG---------L 180 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH-------cccHHH---------H
Confidence 9999999999988887 8889999999999999999999999999999999999987 455543 3
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhh
Q 014686 153 CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+.+..+..++..+.....|++++ +++ ++ .+.++.+|+ .+.......+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~----------------------~~~~~~~~~--~~~~~~~~~~~~~~~ 232 (399)
T PRK05122 181 GLLIMLLALLGLLLARPRPAVPP---VKG-ER----------------------LPFRRVLGR--VWPYGMGLALASIGF 232 (399)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCC---CCc-cc----------------------hhHHHHHHH--HHHHHHHHHHHHHHH
Confidence 34444433332222222222211 100 00 011112221 111111122222233
Q ss_pred hhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014686 233 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS 312 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (420)
.....+.+.|..+ .+. .+.+......+++.+++++ ..+++.||.++|+....+..+..++.......++
T Consensus 233 ~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-- 301 (399)
T PRK05122 233 GTIATFITLYYAA------RGW--DGAALALTLFGVAFVGARL-LFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS-- 301 (399)
T ss_pred HHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 3344455665532 233 2345556666777777776 6677788889888887777766666555443221
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCc
Q 014686 313 GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGS 392 (420)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~ 392 (420)
.+ ......++.+++.....+.......+..|+++||++.|+.+...++|..++|.+.|.+.+.. |+
T Consensus 302 ---~~-~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------g~ 367 (399)
T PRK05122 302 ---PW-MALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF----------GY 367 (399)
T ss_pred ---HH-HHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CH
Confidence 11 22233444455555666776777778899999999999999999999999999999999987 89
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 014686 393 QMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 393 ~~~f~~~~~~~~~~~~~~~~ 412 (420)
+..|++.+++.+++.+....
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 368 PSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999988888887766655
No 31
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.1e-32 Score=262.37 Aligned_cols=348 Identities=15% Similarity=0.176 Sum_probs=259.7
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++..++.+++++++|++.+++.|+++|+
T Consensus 29 ~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~ 102 (485)
T TIGR00711 29 AGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGF 102 (485)
T ss_pred HHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHh
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+++|++++++......+|..+||.+++++.+ ..|||+.| ...+...
T Consensus 103 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~~w~~~f---------~~~~~~~ 166 (485)
T TIGR00711 103 GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-------NYHWRWIF---------LINVPIG 166 (485)
T ss_pred hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-------CcCceehh---------hhhhHHH
Confidence 99988887 9999999999999999999999999999999999999988 67777666 3444333
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchh---------Hhhhhhh-----------------------hhhhhhhcCCCC
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALESAS-----------------------AEVKEEEGREAT 207 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~---------~~~~~~~-----------------------~~~~~~~~~~~~ 207 (420)
++. +...+.+||+++.++++.|...... ....+.. ...++.+++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (485)
T TIGR00711 167 IIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPL 246 (485)
T ss_pred HHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 333 3344556765433222111100000 0000000 000111222333
Q ss_pred chhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 014686 208 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 287 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (420)
...+++|+|+++...+..++..........+.|.|+.+. .|+++.+.+....+..++.+++.+ +.+++.||.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~ 320 (485)
T TIGR00711 247 VDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGLHILPVGLAPMLSSP-IAGRMGDKIDP 320 (485)
T ss_pred cCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCc
Confidence 345688999988887777777777777777888888765 789999999999998999999887 67778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHH
Q 014686 288 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKA 367 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 367 (420)
|+....+..+..++...+....... ...+ .......+.+++.....+.......+..|+++++++.|+.+..+++|+.
T Consensus 321 ~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 398 (485)
T TIGR00711 321 RKLVTIGLILYAVGFYWRAFTFTPD-TPFL-AIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS 398 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCC-CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH
Confidence 9988888777766665544211111 1111 1222233444445555555566666778999999999999999999999
Q ss_pred HhhhhhhHHHHh
Q 014686 368 AGPAGGGALFSW 379 (420)
Q Consensus 368 ~g~~~~g~l~~~ 379 (420)
+|+.+.|.+.++
T Consensus 399 ig~~i~g~~~~~ 410 (485)
T TIGR00711 399 IGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 32
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.9e-32 Score=251.98 Aligned_cols=346 Identities=12% Similarity=0.050 Sum_probs=240.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+|+|.++.+ .+++.+.+.+++.+.++++|+++||+|||++++.+..+.+++.+.+.++++. ++.|+++|++
T Consensus 31 ~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~ 101 (393)
T PRK11195 31 KELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIG 101 (393)
T ss_pred HHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 567777777 9999999999999999999999999999999999999999998888777664 7789999999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
.+...|+ .+++.|++|+|+|++++++.+....+|.++||.+++++.+ .. |+..+.+.+...+
T Consensus 102 ~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-------~~----------~~~~~~i~~~~~~ 164 (393)
T PRK11195 102 AAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-------PH----------AEAALAVCALIYL 164 (393)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HH----------HHHHHHHHHHHHH
Confidence 9999998 9999999999999999999999999999999999999987 11 3333344443333
Q ss_pred HHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHH
Q 014686 162 GVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSL 241 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (420)
...+..+.+||+++++++++++.... .++ . ....++++++|.+........+............+.
T Consensus 165 ~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~----~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T PRK11195 165 LAALFNLFIPRLGARRPGQSWNPIAL---LRD----F-------FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLA 230 (393)
T ss_pred HHHHHHhcCCCCcccccccCCCHHHH---HHH----H-------HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567887654322211111000 000 0 011346677777665554444433333444445566
Q ss_pred hhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 014686 242 WANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLN 321 (420)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (420)
|.++. +|.++.+.|......+++.+++++ ..+++.||.++++....+... ......+... . ..+ ...
T Consensus 231 ~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~~-~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~~~----~-~~~-~~~ 297 (393)
T PRK11195 231 WAPVA-----LGITLNQPAYLQAVVAIGIAVGAG-AAARLVTLETVLRVLPAGILM-GLVVLLMALQ----H-SLL-PAY 297 (393)
T ss_pred HHHHH-----cCCChhHHHHHHHHHHHHHHHHHH-HHHHHhcCCcccchHHHHHHH-HHHHHHHHHH----h-HHH-HHH
Confidence 66554 689999999999999999999988 556666666777666665432 2222222211 1 112 222
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhhcCCcch-hhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHH
Q 014686 322 CASVVKNLLSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLN 400 (420)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~ 400 (420)
...++.+++.....+...+..++..|++. +|++.++.+..++++..++..+.+.+ +.. |.+..+.+.+
T Consensus 298 ~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~ 366 (393)
T PRK11195 298 PLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKL----------GVPVVAVIVG 366 (393)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHc----------CCCHHHHHHH
Confidence 33334444555555666777777655554 79999999999999999999999866 444 6666777766
Q ss_pred HHHHHHHHHHhh
Q 014686 401 VVEAIGVLMTFK 412 (420)
Q Consensus 401 ~~~~~~~~~~~~ 412 (420)
+..+++..+.+.
T Consensus 367 ~~~~~~~~~~~~ 378 (393)
T PRK11195 367 FGLLVALAMALL 378 (393)
T ss_pred HHHHHHHHHHHH
Confidence 655555554443
No 33
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.8e-32 Score=251.51 Aligned_cols=330 Identities=17% Similarity=0.122 Sum_probs=243.8
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|.|+++ .++..+.+.+++.+++++.|+++||+|||+++..+..+..++.+...++++++.+++.|+++|+
T Consensus 40 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 113 (406)
T PRK15402 40 VEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGI 113 (406)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|.+|+++|.+..++......+|..++|.+++.+.+ ..+||+.| .+.++..
T Consensus 114 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~~~w~~~~---------~~~~~~~ 177 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------VLPWRGMF---------VLFAALA 177 (406)
T ss_pred HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccCccHHH---------HHHHHHH
Confidence 98887776 8999999999999999999988888999999999999987 55665544 4544444
Q ss_pred HHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++.. ...+..||++++++++.+ . ++.....++++|||+++...+..++.......+....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (406)
T PRK15402 178 ALSFFGLWRAMPETAGRVGEKLS----L---------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALS 238 (406)
T ss_pred HHHHHHHHHhCCCCCcccccccc----H---------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4433 334556765432211100 0 0001234667889988877766665555445555556
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.++.+. +|+++.+.+.......++.+++.+ ..+++.||.++|+....+.....++...+.......... +..
T Consensus 239 p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~ 311 (406)
T PRK15402 239 PVILISG-----EQLSSYEYGLLQVPVFGALIAGNL-TLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHA-YLW 311 (406)
T ss_pred HHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHccccc-HHH
Confidence 7665544 688888888887777777777776 677788888999988888777766666555433211111 112
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
......+.+.+.....+........ .+++++|++.+..+..+.++..+|+.+.+.+++..
T Consensus 312 ~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 312 LTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 2233333334444444554444433 45589999999999999999999999999998876
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=1.7e-32 Score=255.36 Aligned_cols=347 Identities=14% Similarity=0.060 Sum_probs=252.1
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-----SVNFWMAVLTRF 77 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~ 77 (420)
+|++.++.+ .|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+. .++++.+++.|+
T Consensus 45 ~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 118 (417)
T PRK10489 45 QMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGL 118 (417)
T ss_pred HHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 456667777 999999999999999999999999999999999988887777665442 567899999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
++|++.+...+. .+++.|++|+++|+++.++.....++|..+||.+++.+.+ ..+|++.+ ...
T Consensus 119 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~-------~~~~~~~~---------~~~ 182 (417)
T PRK10489 119 WDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA-------AGGVAWNY---------GLA 182 (417)
T ss_pred HHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-------HHhhHHHH---------HHH
Confidence 999998887777 8999999999999999999999999999999999999987 45555443 455
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
++..++..+..+.+||++++++++++ .. + +..+..+..+|+|.++...+..++... .....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~---~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 243 (417)
T PRK10489 183 AAGTFITLLPLLRLPALPPPPQPREH---PL-R--------------SLLAGFRFLLASPVVGGIALLGGLLTM-ASAVR 243 (417)
T ss_pred HHHHHHHHHHHHhCCCCCCCCccccc---ch-H--------------HHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHH
Confidence 55555555555667775433211110 00 0 001123456777777655544443332 23455
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
.+.|.|..+. +|.++.+.+.+.+..+++.+++.+ +.+++.||.++++.+..+..+..++.+.+...+.
T Consensus 244 ~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~~-~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------ 311 (417)
T PRK10489 244 VLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGAL-TSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM------ 311 (417)
T ss_pred HhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHHH-HHHHhhhccCcchHHHHHHHHHHHHHHHHHccch------
Confidence 5677777654 688899999999998999988887 6778888766666666666665555544433221
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f 396 (420)
+.......++.+.+.....+...++..+..|++.||++.|+.+...++|..+||.+.|.+.|.. |+...+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~----------g~~~~~ 381 (417)
T PRK10489 312 WILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM----------TPVASA 381 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh----------chhhHH
Confidence 1122233334444444555667788889999999999999999999999999999999999987 777777
Q ss_pred HHHHHHHHHHHHHHhh
Q 014686 397 FVLNVVEAIGVLMTFK 412 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~~ 412 (420)
...+++.++..++...
T Consensus 382 ~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 382 SASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7776665555444433
No 35
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1e-31 Score=246.90 Aligned_cols=337 Identities=15% Similarity=0.153 Sum_probs=248.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.|+++ .|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+.+++++|++.++++|+++|+
T Consensus 33 ~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (381)
T PRK03633 33 LAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGI 106 (381)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4688999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...|. .+.+.|..++++|+++++....+.++|..+||.+++.+.+ ...| ...|+.. ....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~~~-----~~~~~~~----~~~~ 170 (381)
T PRK03633 107 GCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST-------ELMS-----VLPWVTG----LVLA 170 (381)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cccc-----hHHHHHH----HHHH
Confidence 98888776 7788888999999999999999999999999999999876 2111 1122211 1111
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS 240 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
....+.....+|+ ..+ ++ +..+.++.+|+|.++......+...........+.|
T Consensus 171 ~~~~~~~~~~~~~--~~~--~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 224 (381)
T PRK03633 171 AILPLLFTRILNQ--QAE--NH----------------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMP 224 (381)
T ss_pred HHHHHHHhcccCC--CCC--CC----------------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111112211 100 00 012234567777776544433333333444555677
Q ss_pred HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 014686 241 LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLL 320 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (420)
.|..+ .|.++.+.+...+...+..++++. ..+++.||+++|+.+..+.....++..... .. ....
T Consensus 225 ~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~---~~~~--- 289 (381)
T PRK03633 225 LYLNH------QGMSDASIGFWMALLVSAGILGQW-PIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ---AAMA--- 289 (381)
T ss_pred HHHHH------cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---HHHH---
Confidence 77643 478888999999988889999987 667888888999888777666665544332 11 1111
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHH
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLN 400 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~ 400 (420)
....+.+.......|.......|..|+++++.+.+..+...++|..+||.+.|.+.|.. +++..|.+.+
T Consensus 290 -~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~----------g~~~~f~~~~ 358 (381)
T PRK03633 290 -PALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY----------SDNLLFIMIA 358 (381)
T ss_pred -HHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CccHHHHHHH
Confidence 11222233445667888888889899888888888888889999999999999999988 7888999988
Q ss_pred HHHHHHHHHHhh
Q 014686 401 VVEAIGVLMTFK 412 (420)
Q Consensus 401 ~~~~~~~~~~~~ 412 (420)
.+.++..+..++
T Consensus 359 ~~~l~~~~~~~~ 370 (381)
T PRK03633 359 SVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHh
Confidence 888877666555
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.8e-32 Score=257.47 Aligned_cols=366 Identities=14% Similarity=0.143 Sum_probs=256.1
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHhhh
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGS 81 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~ 81 (420)
|+|.+..+ .|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|+
T Consensus 70 ~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGAL------QGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHH------hhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 78888888 9999999999999999999999999999999999999999998887654 568889999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcc-ccccccccCccchHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
+.+...|. ..++.|++|+++|++++++...+..+|.+++|++++.+.+ . .|||..| .+.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~f---------~i~~~~ 207 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE-------SWGGWPMIF---------YVFGIV 207 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccCCCCeeh---------hhhhHH
Confidence 99999987 9999999999999999999999999999999999999987 4 3666655 555665
Q ss_pred HHHHHHHH-HhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~~~~~~-~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.++..+.+ ...+|+|+.+++.+++ +++..++..++ ++++++.+..++++++++.++...+..++.......+.++
T Consensus 208 ~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (465)
T TIGR00894 208 GCAWSLLWFVFPADDPSIHPCISKF---EKKYINSSLQG-QKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTY 283 (465)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHH---HHHHHHhhccc-ccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544444 3445555433221111 11111111000 1111122345788999999999988888888877777888
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH-----H---HHHHHHHHHHHHHHHHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV-----A---RIAGVLTIPLLTSYPYIAM 310 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~ 310 (420)
.|.|+.+. +|++..+.+...+...++..++.+ +.+++.||.++|+. . ..+..........+.. ..
T Consensus 284 lp~~l~~~-----~g~s~~~~g~~~~~~~~~~~i~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 356 (465)
T TIGR00894 284 LPTFISWV-----LRVSGKENGLLSSLPYLFAWLCSI-FAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL-PY 356 (465)
T ss_pred HHHHHHHH-----hCcChHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 89888665 789999999999988899988887 67777776543211 1 1111111111111111 11
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCC
Q 014686 311 LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLP 390 (420)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 390 (420)
... .... ......+.+.+.....+.......+..| +.+|.+.|+.+..+.+++.++|.+.|.+.+.... .
T Consensus 357 ~~~-~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~-------~ 426 (465)
T TIGR00894 357 LSA-AFYL-TIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSK-------N 426 (465)
T ss_pred cCC-chHH-HHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCc-------h
Confidence 011 1111 1112222222223333444444556454 6999999999999999999999999988775311 1
Q ss_pred CchHHHHHHHHHHHHHHHHHhh
Q 014686 391 GSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 391 g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
+|...|.+.+++.+++.++...
T Consensus 427 ~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 427 VWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHeee
Confidence 5888999999888888776654
No 37
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.5e-31 Score=246.08 Aligned_cols=343 Identities=15% Similarity=0.123 Sum_probs=245.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
++++|.|+.+ .|++.+++.+...+.+++.|+++||+||||.++ .+.....++.+++++++|++.+++.|+++|
T Consensus 25 ~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 98 (375)
T TIGR00899 25 SEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLS 98 (375)
T ss_pred HcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 5789999999 999999999999999999999999999988765 456666777888899999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhH--HHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
.+.+...|. .+++.|+.|+++|.+. .+....+.++|.++||++++.+.+ .+|||.. +.+.+
T Consensus 99 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~-------~~~~~~~---------f~~~~ 162 (375)
T TIGR00899 99 SFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL-------GFGFTVM---------FLTAA 162 (375)
T ss_pred hhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------hcccHHH---------HHHHH
Confidence 877777776 8888998887777754 578888899999999999999987 4555544 46666
Q ss_pred HHHHHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 158 LFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 158 ~~~~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
+..++.. +.++.+||+|++++++++ ..+.++.+++|+++......++.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYI 219 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHH
Confidence 6555443 344567876543221100 0112235566666655444444333333444
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
...|.|..+. +|.++.+.+...........++.. ..+++.||.++|+....+.....+........+ ..
T Consensus 220 ~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-----~~ 288 (375)
T TIGR00899 220 INMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFML-LAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN-----SL 288 (375)
T ss_pred hhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-----HH
Confidence 4566666444 688888888887776666666665 677888888999887776655444333322211 11
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f 396 (420)
+ .......+.++......+.......|..| ++++++.++.+...++|..++|.+.|.+.|.. |++..|
T Consensus 289 ~-~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~----------g~~~~~ 356 (375)
T TIGR00899 289 W-ALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERW----------SYHAVY 356 (375)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cchhHH
Confidence 2 12223333344445556677777888776 56779999999999999999999999999987 889999
Q ss_pred HHHHHHHHHHHHHHhh
Q 014686 397 FVLNVVEAIGVLMTFK 412 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~~ 412 (420)
.+.+++.+++.++..+
T Consensus 357 ~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 357 WFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 9988888877766543
No 38
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=9.2e-32 Score=248.08 Aligned_cols=346 Identities=17% Similarity=0.192 Sum_probs=250.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.|+.+ .|++.+...++..+.+++.|+++||+|||+++..+.++..++.+.+.++++++.+++.|+++|+
T Consensus 38 ~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 111 (400)
T PRK11646 38 VDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGL 111 (400)
T ss_pred HHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4678888888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...|. .+++.|++|+|+|++++++.....++|..+||.+++.+.+ .|||+.| .+.++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--------~g~~~~f---------~~~~~~~ 174 (400)
T PRK11646 112 GGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--------YDFRLVC---------ATGAVLF 174 (400)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhHHHHH---------HHHHHHH
Confidence 98888887 8999999999999999999999999999999999999974 3555444 4544444
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++. ++..+.+||.++. ++ .+ +..+..++++|+|+++...+..+...........+.
T Consensus 175 ~~~~i~~~~~~~~~~~~---~~--~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (400)
T PRK11646 175 VLAAAFNAWLLPAYKLS---TV--RT------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLML 231 (400)
T ss_pred HHHHHHHHHhCCccccc---cc--ch------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 433 2334455543211 00 00 011234567888887765554444333333334456
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.|..+. +.++.+.+.+.+..++..........++.+||.+.++....+..+..++...+...+. .+.
T Consensus 232 p~~~~~~------~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~- 299 (400)
T PRK11646 232 PIMVNDI------AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN-----LQQ- 299 (400)
T ss_pred hhhHHhh------cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh-----HHH-
Confidence 6665442 3466788888888777777666667788888777666666666555555544433221 111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
......+.+.+.....|...++..+..|+++||+++|+.+...++|..+||.+.|.+.|..++.. .....|...
T Consensus 300 ~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~------~~~~~~~~~ 373 (400)
T PRK11646 300 LFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALN------QPELPWMML 373 (400)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcC------CcchHHHHH
Confidence 22222333344456667888899999999999999999999999999999999999999864321 245566666
Q ss_pred HHHHHHHHHHHh
Q 014686 400 NVVEAIGVLMTF 411 (420)
Q Consensus 400 ~~~~~~~~~~~~ 411 (420)
+.+.+++.+...
T Consensus 374 ~~~~~~~~~~~~ 385 (400)
T PRK11646 374 GIIGLITLLALY 385 (400)
T ss_pred HHHHHHHHHHHH
Confidence 666666655443
No 39
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.9e-31 Score=252.41 Aligned_cols=349 Identities=15% Similarity=0.137 Sum_probs=255.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.++.+ .+++.+.+.++..++.+++|+++||+|||++++.+..+.+++.+.+.++++++.+++.|+++|+
T Consensus 37 ~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 110 (471)
T PRK10504 37 AQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGV 110 (471)
T ss_pred HHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 4678999989 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...|. .+++.|++|+++|+++.++.....++|..+||.+++.+.+ ..|||+.| .......
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~-------~~gw~~~f---------~~~~~~~ 174 (471)
T PRK10504 111 GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE-------YASWHWIF---------LINIPVG 174 (471)
T ss_pred hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-------hccHHHHH---------HHHHHHH
Confidence 99998887 8999999999999999999999999999999999999998 55666555 4444333
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHh---------hhhhh----------------------hhhhhhhcCCCCc
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDA---------LESAS----------------------AEVKEEEGREATP 208 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~---------~~~~~----------------------~~~~~~~~~~~~~ 208 (420)
.+. +......|+.+.... +.+........ ..+.. ...++++++++..
T Consensus 175 ~l~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (471)
T PRK10504 175 IIGAIATLMLMPNYTMQTR-RFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALF 253 (471)
T ss_pred HHHHHHHHHhCCCccccCC-CCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 333 233344454432211 11111000000 00000 0001112222233
Q ss_pred hhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH
Q 014686 209 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 288 (420)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (420)
..+++|||+++......++............|+|.+.. .|.++.+.+.......+..+++.. +.+++.||+++|
T Consensus 254 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~~~l~~r~g~~ 327 (471)
T PRK10504 254 SLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAGLMMIPMVLGSMGMKR-IVVQVVNRFGYR 327 (471)
T ss_pred CHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCch
Confidence 44688999998887777776666666666777777654 688999999998887777777766 667788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHH
Q 014686 289 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 368 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 368 (420)
+.+..+..+..+....+....... ..+ ......+..+.+.....+.......+..|++++++++|+.++...+|..+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i 404 (471)
T PRK10504 328 RVLVATTLGLALVSLLFMLVALLG--WYY-LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI 404 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc--cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH
Confidence 998888776666655544432111 111 11222333334455566777788888899999999999999999999999
Q ss_pred hhhhhhHHHHhhhh
Q 014686 369 GPAGGGALFSWAQK 382 (420)
Q Consensus 369 g~~~~g~l~~~~~~ 382 (420)
|+.+.|.+.+..+.
T Consensus 405 g~~i~g~ll~~~g~ 418 (471)
T PRK10504 405 GVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999998753
No 40
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=247.70 Aligned_cols=341 Identities=13% Similarity=0.144 Sum_probs=249.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|+|+++ .+++.+.+.+++.+++++.|++.||+|||+++..+.++..++.++.+++++++.+++.|+++|+
T Consensus 34 ~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~ 107 (394)
T PRK03699 34 AEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGV 107 (394)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+++|+++++..+...++|..++|.+.+.+.+. ..|||+.| ...++..
T Consensus 108 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~gw~~~f---------~~~~~~~ 172 (394)
T PRK03699 108 VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR------SIEWYWVY---------ACIGLVY 172 (394)
T ss_pred hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cccHHHHH---------HHHHHHH
Confidence 98887776 88999999999999999999999999999999998887641 34555444 5555554
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS 240 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
++..+..++ ++.|+.++++++ +. ++. .++ ..++.++...+..++..........+.|
T Consensus 173 ~~~~~~~~~-~~~p~~~~~~~~---~~--------------~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p 229 (394)
T PRK03699 173 VAIFILTLF-SEFPALGKHAPK---AD--------------KPV----AKE-KWGIGVLFLAIAALLYILAQLTFISWVP 229 (394)
T ss_pred HHHHHHHHh-cCCccccccCcc---cc--------------Ccc----ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333322 222221111000 00 000 011 1245555555555555555566677888
Q ss_pred HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 014686 241 LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLL 320 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (420)
.|+.+. +|+++.+.+.+.+...++..++++ ..+++.||+++|+.+.....+..+....+.... + ..+ .
T Consensus 230 ~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~---~-~~~--~ 297 (394)
T PRK03699 230 EYAQKK-----FGMSLEDAGNLVSNFWMAYMVGMW-IFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD---D-PSH--L 297 (394)
T ss_pred HHHHHH-----cCCChHHhhHHHHHHHHHHHHHHH-HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC---C-chH--H
Confidence 888655 789999999999998888889887 778888999998887776655554443332211 1 111 2
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHH
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLN 400 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~ 400 (420)
....+..++......+...+...+..| +++++..|......++|..++|.+.|.+.|.. |++..++..+
T Consensus 298 ~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~----------g~~~~~~~~~ 366 (394)
T PRK03699 298 LYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF----------GLQAALLTAN 366 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh----------CchhhhhhhH
Confidence 223333444555566666667777555 55678888999999999999999999999987 7888888777
Q ss_pred HHHHHHHHH
Q 014686 401 VVEAIGVLM 409 (420)
Q Consensus 401 ~~~~~~~~~ 409 (420)
++.+++.+.
T Consensus 367 ~~~~~~~~~ 375 (394)
T PRK03699 367 GLYAVVFVM 375 (394)
T ss_pred HHHHHHHHH
Confidence 777666443
No 41
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=9.8e-32 Score=248.36 Aligned_cols=336 Identities=16% Similarity=0.133 Sum_probs=232.9
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh--------hhhHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--------SVNFWMAV 73 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~--------~~~~~~l~ 73 (420)
++|+|.|+++ .|++.+++.+++.++++++|+++||+||||+++.+.+...++.+.... .++++.++
T Consensus 43 ~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 43 HHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred HHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 4789999999 999999999999999999999999999999999988877766543321 36889999
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+.|+++|++.+...+. .+++.|++|+|+|++++++.+.+.+.|..++|++++.+.+ ..||| ..
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~-------~~g~~---------~~ 180 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS-------HFGFA---------AL 180 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh-------ccChH---------HH
Confidence 9999999999888786 8899999999999999999999999999999999999987 44444 33
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhh
Q 014686 153 CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+.+..+..++........||.+++ ++ +++ +.++..| .++...+...+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~----------------------~~~~~~~--~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 181 ALTTMVLPLLAWAFNGTVRKVPAH---AG-ERP----------------------SLWSVVG--LIWKPGLGLALQGVGF 232 (392)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCC---cc-cCc----------------------hHHHHHH--HHHHhHHHHHHHHHHH
Confidence 333333322222222222332111 00 000 0111111 1111111111222222
Q ss_pred hhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014686 233 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS 312 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (420)
.....+.+.|+.+ .+++. .+......+++.+++++ ..+++.||.++|+.+..+..+..++........
T Consensus 233 ~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--- 300 (392)
T PRK12382 233 AVIGTFVSLYFAS------KGWAM--AGFTLTAFGGAFVLMRV-LFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--- 300 (392)
T ss_pred hHHHHHHHHHHHh------cCCch--hHHHHHHHHHHHHHHHH-HHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc---
Confidence 3334455555543 23432 45555666677777776 667778888998888877777666655544322
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCc
Q 014686 313 GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGS 392 (420)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~ 392 (420)
+ .+ .......+.+.......+.......+..|+++||++.|+.+...++|+.++|.+.|.+.|.. ||
T Consensus 301 ~--~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~----------g~ 367 (392)
T PRK12382 301 T--AW-VALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF----------GY 367 (392)
T ss_pred c--HH-HHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------Cc
Confidence 1 11 12233334444555566777778888899999999999999999999999999999999988 89
Q ss_pred hHHHHHHHHHHHHHHHHHhh
Q 014686 393 QMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 393 ~~~f~~~~~~~~~~~~~~~~ 412 (420)
+..|.+.+.+.+++.+..+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 368 PSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888776655
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.7e-32 Score=255.19 Aligned_cols=375 Identities=14% Similarity=0.028 Sum_probs=252.0
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHh
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----VNFWMAVLTRFLL 79 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~ 79 (420)
|+|.++++ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++. ++++.+.+.|++.
T Consensus 55 ~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 128 (438)
T TIGR00712 55 EQGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLN 128 (438)
T ss_pred HcCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 45889999 9999999999999999999999999999999999999999998887764 4678888999999
Q ss_pred hhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
|++.+...+. ...+.|++|+|+|++++++.+.+.++|..++|.+.+...+. ..+||..| ...++
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~------~~~w~~~f---------~~~~~ 193 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW------FNDWHAAL---------YFPAI 193 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH------hhhhHHHH---------HHHHH
Confidence 9998887775 88899999999999999999999999999998887765431 24555444 56555
Q ss_pred HHHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCC-chhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 159 FAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 159 ~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
..++ .+...+++||++++.+.++.++.+. +..++.. ++++++.+.+. ..+.++|++.++...+..++.........
T Consensus 194 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T TIGR00712 194 CAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYN-EKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVL 271 (438)
T ss_pred HHHHHHHHHHHhccCCHHhcCCCCchhccc-ccccccc-cccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHH
Confidence 5554 3445566787765422111110000 0000000 00000000000 11246788988887776666665556667
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
++.|.|+.+. .|+++.+.+....+..+..+++++ ..+++.||.++++....+.................+....
T Consensus 272 ~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (438)
T TIGR00712 272 DWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGTL-LCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNP 345 (438)
T ss_pred HhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCch
Confidence 7888888765 688999999999888888999887 7778888875432222222222111111111000000011
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHH-HHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK-AAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
+. .....+..+....+..........|.+|+++||++.|+.+...++++ +++|.+.|.+.|.. |++..
T Consensus 346 ~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~----------g~~~~ 414 (438)
T TIGR00712 346 LV-DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF----------GWDGG 414 (438)
T ss_pred HH-HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc----------cchHH
Confidence 11 11111111221112222223456788999999999999999988875 68999999999987 88999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccC
Q 014686 396 FFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 396 f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
|.+..++.+++.+.... ..+|+|
T Consensus 415 ~~~~~~~~~~~~~~~~~-~~~~~~ 437 (438)
T TIGR00712 415 FMVMIGGSILAVILLIV-VMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHHHHH-HHhhcc
Confidence 99888888888777777 666665
No 43
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2.2e-32 Score=249.31 Aligned_cols=325 Identities=26% Similarity=0.379 Sum_probs=243.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|.|+++ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+++|++.+++.|++.|+
T Consensus 24 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 97 (352)
T PF07690_consen 24 AEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGI 97 (352)
T ss_dssp HCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccc
Confidence 5789999999 9999999999999999999999999999999999999999997777677888899999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+|+|++++++.....++|.+++|.+++.+.+ ..+||+.| .+.++..
T Consensus 98 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~~~~~~~---------~~~~~~~ 161 (352)
T PF07690_consen 98 GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------YFGWRWAF---------LISAILS 161 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HCHHCCHH---------HHHHHHH
T ss_pred ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------cccccccc---------ccccchh
Confidence 99988887 9999999999999999999999999999999999999997 56666555 5666655
Q ss_pred HHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCC-chhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 161 FGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 161 ~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
++..+ ...++++++++++++++++++. +++++.. ..+.+.++|.+|......++..........+
T Consensus 162 ~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (352)
T PF07690_consen 162 LIAAILFILFLPEPPPPRERESPKESES-------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFF 228 (352)
T ss_dssp HHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhhhhccccccccccccccc-------------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcc
Confidence 55433 3355565555444333222210 0111112 3567777777765555555555555667777
Q ss_pred HHHhhcCcccCCccCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 014686 239 FSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA 317 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
.|.|..+. +|++ ..+.+......++...++++ +.+++.||.++++..........+....+........ .
T Consensus 229 ~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 299 (352)
T PF07690_consen 229 LPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGSL-LAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSS---P 299 (352)
T ss_dssp HHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCH---H
T ss_pred cchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhh---H
Confidence 88775555 7888 78999999999999999877 6667778888777766666666655555544433211 1
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhh
Q 014686 318 FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 370 (420)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 370 (420)
........+.+++.....+.......+..|++++|++.|+.+...++++.+||
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 12222344455566677889999999999999999999999999999999987
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=6.9e-31 Score=243.01 Aligned_cols=352 Identities=14% Similarity=0.175 Sum_probs=245.7
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh---h-hhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L-SVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l 78 (420)
+|+|.|+++ .|++.+.+.+++.+++++.|++.||+||||++..+..+.+++.+++. . .++++.+++.|++
T Consensus 41 ~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 114 (402)
T TIGR00897 41 KALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGI 114 (402)
T ss_pred HHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence 678999999 99999999999999999999999999999999999999988876553 3 3578889999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHH-HHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
+|++.+...+. .+.+.|++|+|+|++++|+...+.++|. .++|.+++.+.+ .+||+..+ |+.....
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~-------~~g~~~~~----~~~~~~~- 182 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP-------AFGEMNTL----WSALAFV- 182 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------ccchHHHH----HHHHHHH-
Confidence 99998777666 7888999999999999999999999997 689999999887 56654332 3322211
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
.+..++..+..+|.+++++++ ++ ++. ++..+..++++|+|+++...+..++.........
T Consensus 183 ---~~~~~~~~~~~~~~~~~~~~~-~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 183 ---LTGGVIALFSNKDIFTPQHMQ-TR-EKF---------------SELGKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred ---HHHHHHHHhccCCCCCccccc-CC-cch---------------hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 111222233344432211110 00 000 0001124568899998887777766666666667
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH-HHHHHHHHHHHHHHHHHHhhhhH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR-IAGVLTIPLLTSYPYIAMLSGFG 315 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
++.|.|..+ +|++..+.+.......++..++.+ ..+++.||.++|+... .+.+...+....+..........
T Consensus 243 ~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~~-~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 243 VFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFNV-IFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 778877643 588888888888888889999988 6677888888777653 22222223222222221110111
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
.+ ......+..+.+.....+. .....+ .+|++||++.|+.+...++++.++|.+.|.+.|.. |+...
T Consensus 316 ~~-~~~~~~~~~G~~~~~~~~~-~~~~~~-~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~----------g~~~~ 382 (402)
T TIGR00897 316 FA-VALIIAIALGIFLAGYVPL-AAVFPT-LAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF----------GAIGV 382 (402)
T ss_pred HH-HHHHHHHHHHHHHHHHHHH-HHHHHh-hCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------chHHH
Confidence 11 1222333333333344343 445566 45679999999999999999999999999999987 88899
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014686 396 FFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 396 f~~~~~~~~~~~~~~~~ 412 (420)
+++.+++.+++.++..+
T Consensus 383 ~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 383 VWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999888887776655
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4.8e-31 Score=243.52 Aligned_cols=325 Identities=17% Similarity=0.155 Sum_probs=240.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|.|+++ .+++.+++.++..+++++.|+++||+|||+++..+.++..++.+...++++++.+++.|++.|+
T Consensus 32 ~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 32 AADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+|+|++++++.+....+|..++|.+++.+.+ ..+||.. +...++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~~~~~~---------~~~~~~~~ 169 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV-------WLSWHAI---------FAFLSLAG 169 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCHHHH---------HHHHHHHH
Confidence 99988887 9999999999999999999999999999999999999987 4455443 35555544
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++. +...+..||+++++++++ .+ +..+..++.+|+|+++...+...+............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (385)
T TIGR00710 170 ILLSALIFFILPETLPYEARIQ--IS------------------TYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGA 229 (385)
T ss_pred HHHHHHHHHhCCCCCCCcccCC--HH------------------HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcC
Confidence 443 334455666543321100 00 001224567788888776666555554444555555
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.+..+. +|+++.+.+.......++.+++++ +.+++.||.++|+....+..+..++...+........ ..+..
T Consensus 230 ~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 302 (385)
T TIGR00710 230 PFVYIDI-----MGVSPSVFGLLFALNIIAMIFGGF-LNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL-GSWAM 302 (385)
T ss_pred hHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-chHHH
Confidence 6555433 788999999999998988888887 6777888889998888777666665555443322111 11222
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
......+.+.+.....+.......|..| ++++++.++.+.....++.+.+.+.+.+
T Consensus 303 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 303 IIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2333344445555666777777777665 7899999999988877666666666633
No 46
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=6.2e-31 Score=243.46 Aligned_cols=347 Identities=15% Similarity=0.146 Sum_probs=242.6
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.+.++ .++..+++.+++.++++++|+++||+|||++++.+..+++++.+++.+++|++.++++|+++|+
T Consensus 43 ~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi 116 (413)
T PRK15403 43 VRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGT 116 (413)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4688888888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..++.|++|+++|++++++......+|..+||.+++.+.+ ..|||+.| .+.++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------~~gw~~~f---------~~~~~~~ 180 (413)
T PRK15403 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------FVHWKVLF---------AIIAVMG 180 (413)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCHHHHH---------HHHHHHH
Confidence 88766666 7889999999999999999999999999999999999987 45665554 5655555
Q ss_pred HHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++..+ ..+.+||++++++++. + . ++..+..++++|||+++...+...+.......+....
T Consensus 181 ~i~~~~~~~~lp~~~~~~~~~~---~-~---------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~ 241 (413)
T PRK15403 181 LIAFVGLLLAMPETVKRGAVPF---S-A---------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVS 241 (413)
T ss_pred HHHHHHHHHhCCCCccccCCCC---C-h---------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55433 3556788654221110 0 0 0001235678899999988777776666666666667
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.++.+. .|+++.+.+........+.++++.+...+..|+.++|. .........++............ ..+..
T Consensus 242 P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~~~~ig~~l~~~~~~~~~-~~~~~ 314 (413)
T PRK15403 242 PVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF-IWRAVPIQLVGLALLIVGNLLWP-HVWLW 314 (413)
T ss_pred hHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH-HHHHHHHHHHHHHHHHHHHHHcc-ccHHH
Confidence 7777655 78999999998887777777777756666666644443 22222222222222211110001 11211
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
......+.+.+.....|......-. -.+..+|++.++.+.....+..+++...|++.++. -...|...
T Consensus 315 ~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~-----------~~~~~~~~ 382 (413)
T PRK15403 315 SVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG-----------GRLPFHLL 382 (413)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------CchHHHHH
Confidence 2233333334444555555532221 22335799999999999999999999999888774 34455555
Q ss_pred HHHHHHHHH
Q 014686 400 NVVEAIGVL 408 (420)
Q Consensus 400 ~~~~~~~~~ 408 (420)
++++.+...
T Consensus 383 ~~~~~~~~~ 391 (413)
T PRK15403 383 AVVAGVIVV 391 (413)
T ss_pred HHHHHHHHH
Confidence 544444433
No 47
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.7e-31 Score=245.97 Aligned_cols=351 Identities=15% Similarity=0.154 Sum_probs=257.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.|+.+ .|++.+.+.++..+++++.|+++||+|||++++.+.++..++.+..+++++++.++++|++.|.
T Consensus 35 ~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 108 (395)
T PRK10054 35 SRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINC 108 (395)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4678999999 9999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...++ .++..|..|+++|++++++.....++|.+++|.+++.+.+ .||+..| ...++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--------~g~~~~f---------~~~~~~~ 171 (395)
T PRK10054 109 AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--------QSINLPF---------WLAAICS 171 (395)
T ss_pred HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hccCcHH---------HHHHHHH
Confidence 77777776 8999999999999999999999999999999999998874 3555444 4454444
Q ss_pred HHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++.. ...+.+||+++++++++ + +..+.++.+|||+++...+..++.......+....
T Consensus 172 ~i~~i~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 229 (395)
T PRK10054 172 AFPLVFIQIWVQRSEKAIATET---G-------------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCI 229 (395)
T ss_pred HHHHHHHHHHHhccccccccch---h-------------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhH
Confidence 4433 33444665543211100 0 00112567889988877776666555544444455
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.|.... .+.+.+....+.......+.....+. ..++..||.++|+.+..+..+..++...+..... + .+ .
T Consensus 230 ~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~--~~-~ 300 (395)
T PRK10054 230 SQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQY-SVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN--S--LL-L 300 (395)
T ss_pred HHHHHHh---cccchHHHHHHHHHHhhhhheeeehh-HHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch--H--HH-H
Confidence 5555332 23567777888888887777777665 3444555568888887777666666555433211 1 11 1
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
..+.....+.+.....|.....+.+..|++.++++.+..+ ...+|..+||.++|.++|+. |+...|.+.
T Consensus 301 ~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~----------g~~~~~~~~ 369 (395)
T PRK10054 301 WGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL----------PPWSLFVIL 369 (395)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc----------ChhhHHHHH
Confidence 2233344445555667788888999999999999998765 67799999999999999998 788888888
Q ss_pred HHHHHHHHHHHhhhhhhcc
Q 014686 400 NVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ 418 (420)
+.+..+..++... ..+|+
T Consensus 370 ~~~~~~~~~~~~~-~~~~~ 387 (395)
T PRK10054 370 ALAIVAAWLLMLK-GMRAR 387 (395)
T ss_pred HHHHHHHHHHHHh-ccccC
Confidence 7777777666665 55554
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.1e-31 Score=251.48 Aligned_cols=363 Identities=15% Similarity=0.082 Sum_probs=249.3
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVL-TRFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G 80 (420)
++++|.|.++ .+++.+.+.++..++.++.|+++||+|||++++.+.++..++.++++++++++.+++ .|+++|
T Consensus 46 ~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G 119 (455)
T TIGR00892 46 QQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITG 119 (455)
T ss_pred HHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5788999999 999999999999999999999999999999999999999999999999999998875 579999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.+...+. .+++.++++ ++|+++.++.+.+..+|..++|++++.+.+ .+|||+.| .+.++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-------~~gwr~~f---------~~~~~~ 182 (455)
T TIGR00892 120 LGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-------SFGWRGSF---------LILGGL 182 (455)
T ss_pred hcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-------HhChHHHH---------HHHHHH
Confidence 998875454 788889886 789999999999999999999999999988 55666554 555555
Q ss_pred HHHHHHHHHh-cccccCCCCCCCCcccc-hhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHH
Q 014686 160 AFGVTIAAFW-LPETLHRHNDDDDSCDV-SYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 237 (420)
Q Consensus 160 ~~~~~~~~~~-l~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
.++..+..++ .|+.+.++..+.++++. ..+...+........++..+....+++|+|+++......++..........
T Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (455)
T TIGR00892 183 LLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPII 262 (455)
T ss_pred HHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHH
Confidence 5443333333 33222111000000000 000000000000000000111123578899988777776666665555556
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHH--HHHHHHHHHHHHhhh
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGPIMVARIAGVLT--IPLLTSYPYIAMLSG 313 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 313 (420)
+++.|..+ .|+++.+++...++.+++.+++++ ..+++.|| .++++......... .+..+..... .
T Consensus 263 ~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~---~- 331 (455)
T TIGR00892 263 FLVPYAKD------KGVDEYEAAFLLSIIGFVDIFARP-SCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA---G- 331 (455)
T ss_pred HHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh---c-
Confidence 67777643 588999999999999999988877 55666654 33343333322222 2222222111 1
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCch
Q 014686 314 FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQ 393 (420)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~ 393 (420)
. ...+.+..++.++......+...+...+.+|+++++++.|+.+...++|+++||.+.|.+.|..+ +|+
T Consensus 332 -~-~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g---------~~~ 400 (455)
T TIGR00892 332 -D-YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK---------NYK 400 (455)
T ss_pred -h-HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC---------Ccc
Confidence 1 12233344445556666777888888899999999999999999999999999999999999872 588
Q ss_pred HHHHHHHHHHHHHHHH
Q 014686 394 MVFFVLNVVEAIGVLM 409 (420)
Q Consensus 394 ~~f~~~~~~~~~~~~~ 409 (420)
..|++.+++.+++.+.
T Consensus 401 ~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 401 YIFYASGSIVVSAGLF 416 (455)
T ss_pred hHHHHhhHHHHHHHHH
Confidence 8888887776666543
No 49
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.3e-32 Score=247.63 Aligned_cols=367 Identities=16% Similarity=0.203 Sum_probs=274.1
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 80 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G 80 (420)
.+++.|++| .+++.+.++.|+.+++++.|++.||+|-|+++..+.++.++++++.+.+- +++.+++.|++||
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 478889889 99999999999999999999999999999999999999999999999875 4567899999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.|...|+ ..+.++|.|++||++..++...+..+|.+++-+++|.+.+. .+||++.| .+.++.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW~sif---------Y~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGWPSIF---------YVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCCchHH---------HHHHHH
Confidence 999999998 99999999999999999999999999999999999999982 27777666 677777
Q ss_pred HHHHHHHH-HhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~~~~~~-~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.++..+++ ++..|+|.+++.-.++ +++.+++...+++. +++.+.+++++++++.+|...+..++.+.....+..+
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~~---El~~I~~~k~~~~~-~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISEK---ELKYIEKGKSEAHV-KKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCHH---HHHHHHhccccccc-CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77765554 4455555553322211 11222221111111 1115678999999999999999999999999999999
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch---------HHHHHHHHHHHHHHHHHHHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
.|.|+.+. +|++..+.|++.++..+...+..+ +++.++|+..+ |..-.++....++.++.+.+..
T Consensus 281 ~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k~-~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 281 LPTYLKEV-----LGFDVRETGFLSALPFLAMAIVKF-VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 99999988 899999999999999999999988 77888887644 2222233333334444444433
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCC
Q 014686 310 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFL 389 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 389 (420)
..+. +..+.+..+.. ...+..............|++.+..+|+.+....+.+.++|.+.|.+... ++.
T Consensus 355 ~~~~---~~a~~~l~~~~--~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~-~t~------ 422 (466)
T KOG2532|consen 355 DEHR---LLAVILLTIAI--GLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD-NTR------ 422 (466)
T ss_pred CCcc---hHHHHHHHHHH--HHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC-CCH------
Confidence 2222 11121211111 11222222222222222679999999999999999999999999999851 111
Q ss_pred CCchHHHHHHHHHHHHHHHHHhh
Q 014686 390 PGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 390 ~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
..|+.+|++.+++.+++.++..+
T Consensus 423 ~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 423 EEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHhchheeE
Confidence 16999999999999998766544
No 50
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=6.6e-31 Score=239.64 Aligned_cols=358 Identities=12% Similarity=0.051 Sum_probs=252.3
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNFWMAVLTRF 77 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~ 77 (420)
+|+|+|++| .+++.+++.+++.+..++.|++.||+|.|+++..+.++.++.++..+++ ++++.+++.|+
T Consensus 63 ~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~ 136 (462)
T PRK15034 63 IGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIAL 136 (462)
T ss_pred hhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHH
Confidence 379999999 9999999999999999999999999999999999999999999999987 89999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhc-----cccccCCcccccccccc----Cc
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA-----QPAEKYPNLFSSESLFG----KF 147 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-----~~~~~~~~~~gw~~~~~----~~ 147 (420)
+.|++ +...+. ...+++|+|+|+||+++|+.....++|..+++++...+. + .+||+.... ..
T Consensus 137 l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~-------~~G~~~~~~~~g~~~ 208 (462)
T PRK15034 137 LCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFA-------FLGVNGVPQADGSVM 208 (462)
T ss_pred HHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-------HhccccccccccchH
Confidence 99998 445554 999999999999999999997777777776666554433 3 345543321 22
Q ss_pred cchHHHHHHHHHHHHHHHH-HHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHH
Q 014686 148 PYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 226 (420)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~-~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
+|+....+..+..++..+. ++..++.++ .+. +.++..+.+|+|..|...+.++
T Consensus 209 ~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~~-------------------------~~~~~~~vlk~~~~Wllslly~ 262 (462)
T PRK15034 209 SLANAAWIWVPLLAIATIAAWSGMNDIAS-SRA-------------------------SIADQLPVLQRLHLWLLSLLYL 262 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCccc-ccc-------------------------CHHHHHHHhCCCchhHHHHHHH
Confidence 3555555555555444333 344443221 100 1123466899999999999999
Q ss_pred HHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014686 227 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 306 (420)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
+....+.++..++|.|..+. ++............+...+.++ ++++++||+|+++++..+.+...+......
T Consensus 263 ~tFG~fvg~s~~lp~~~~~~-------~~~~~~l~~~~l~~l~~~l~rp-lgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 263 ATFGSFIGFSAGFAMLAKTQ-------FPDVNILRLAFFGPFIGAIARS-VGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------cChHHHHHHHHHHHHHHHHHHH-hhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 88888888888898887543 2332222223333455666655 889999999999999888876666553322
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCc---------------------chhhHHhhHHHHHHHHH
Q 014686 307 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ---------------------DQRGAANGIAMTGMSLF 365 (420)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~g~~~~~~~~g 365 (420)
..................+...+..+.-+...+.++.+.+|+ ++.|.+.|+....+.+|
T Consensus 335 l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~G 414 (462)
T PRK15034 335 LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVG 414 (462)
T ss_pred HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcc
Confidence 222111001111122222222222333344445555555553 26889999999999999
Q ss_pred HHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 014686 366 KAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 366 ~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
+++-|.+.|...+..+ ++...|+.+.+..+++.++.+..+.|+
T Consensus 415 gf~~p~~~g~~~~~~g---------~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 415 GFFIPQAFGMSLNMTG---------SPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred cchhhHHHHHHHHHcC---------CcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999998874 688899999999999988887745544
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=7.3e-31 Score=244.13 Aligned_cols=362 Identities=14% Similarity=0.115 Sum_probs=258.1
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHH---hhhhhHHHHHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLSVNFWMAVLTRF 77 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~ 77 (420)
+++++|.|+.+ .|++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++ ..+++++.++++|+
T Consensus 52 i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 52 FQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 36789999999 9999999999999999999999999999999999999999999875 46889999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccccc-----------CCcccccccccc
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK-----------YPNLFSSESLFG 145 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~-----------~~~~~gw~~~~~ 145 (420)
++|++.|...+. ..++.|+.|+++|.+.+++.+....+|..++|.+++.+.....+ .....+||..+
T Consensus 126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~- 204 (438)
T PRK10133 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSL- 204 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHH-
Confidence 999999988887 88899987777777789999999999999999998876521100 00012566554
Q ss_pred CccchHHHHHHH-HHHHHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHH
Q 014686 146 KFPYFLPCLCIS-LFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 223 (420)
Q Consensus 146 ~~~~~~~~~~~~-~~~~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (420)
..+||.++.... +..++.++ ....+||.++++++ + ++ +.+.....++++|+|.++...+
T Consensus 205 ~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~--~~---------------~~~~~~~~~~ll~~~~~~~~~l 265 (438)
T PRK10133 205 VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--D--AK---------------QGSFSASLSRLARIRHWRWAVL 265 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c--cc---------------ccchhhhHHHHHhCchHHHHHH
Confidence 346777765433 22222222 23334442211100 0 00 0011223467888998877666
Q ss_pred HHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014686 224 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
..++..........+.+.|+. ++.+|+++.+.+.......++.++++. ..+++.||+++|+.+..+..+......
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~----~~~~g~s~~~ag~~~~~~~~~~~vG~~-~~g~l~~r~g~~~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 266 AQFCYVGAQTACWSYLIRYAV----EEIPGMTAGFAANYLTGTMVCFFIGRF-TGTWLISRFAPHKVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----hhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 666665555555556666642 122799999999999999999999988 778888888999988888766655544
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhc
Q 014686 304 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 383 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 383 (420)
...... .. . ......+.+++.....|..++...+..| ++.+++.++.. +...|+.++|.+.|.+.|..
T Consensus 341 ~~~~~~---~~--~--~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~--- 408 (438)
T PRK10133 341 ISAFAG---GH--V--GLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA--- 408 (438)
T ss_pred HHHHcC---Ch--H--HHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHh-HHhccchHHHHHHHHHHHhc---
Confidence 433322 11 1 1223344566778889999999988766 45778888876 46678999999999999987
Q ss_pred cCCCCCCC-chHHHHHHHHHHHHHHHHHhh
Q 014686 384 LDASFLPG-SQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 384 ~~~~~~~g-~~~~f~~~~~~~~~~~~~~~~ 412 (420)
| .+..|++.....+....+...
T Consensus 409 -------g~~~~~~~v~~~~~~~~~~~~~~ 431 (438)
T PRK10133 409 -------GNIPTAELIPALCFAVIFIFARF 431 (438)
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHH
Confidence 5 677777655555555444433
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=7.5e-31 Score=244.08 Aligned_cols=352 Identities=20% Similarity=0.296 Sum_probs=245.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+|+|.+..+. ...+.|++.+++.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++
T Consensus 42 ~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 120 (408)
T PRK09874 42 EQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLL 120 (408)
T ss_pred HHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 4566665441 012358999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
.+.. +. ..++.|++|+++|++++++......+|..++|.+++.+.+ ..+||..| .+.++..+
T Consensus 121 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~~---------~~~~~~~~ 183 (408)
T PRK09874 121 GGFV-PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD-------SYGLRPVF---------FITASVLF 183 (408)
T ss_pred hhhH-HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCHHHHH---------HHHHHHHH
Confidence 6654 54 7889999999999999999999999999999999999987 45555443 55555444
Q ss_pred HH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHH-HHHHHHhhhhhHHHHH
Q 014686 162 GV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIF 239 (420)
Q Consensus 162 ~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (420)
+. +...+.+||+++..++++ ..+ .++..+.+|+++++.... ...............+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T PRK09874 184 LCFLVTLFCIRENFQPVSKKE--MLH-------------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPIL 242 (408)
T ss_pred HHHHHHHHHhccCcccccchh--hhH-------------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 334455666532211100 000 001223456666544322 2222233333344455
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.|..+... .........+.+....+++.+++.. ..+++.||.++|+.+..+.....+..+....... .+ .
T Consensus 243 ~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~ 313 (408)
T PRK09874 243 TLYVRELAG--NVSNIAFISGMIASVPGVAALLSAP-RLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT-----PL-Q 313 (408)
T ss_pred HHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc-----HH-H
Confidence 655543210 0011112345555666677777766 6678888899999888777666555444333211 11 2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
..+..++.+++.....+...+...+..|++++|+.+++.+....+|..+||.+.|.+.+.. |++..|.+.
T Consensus 314 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~----------g~~~~f~~~ 383 (408)
T PRK09874 314 LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY----------GFRAVFLVT 383 (408)
T ss_pred HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc----------chhHHHHHH
Confidence 2233344455666677888888888899999999999999999999999999999999987 899999999
Q ss_pred HHHHHHHHHHHhh
Q 014686 400 NVVEAIGVLMTFK 412 (420)
Q Consensus 400 ~~~~~~~~~~~~~ 412 (420)
+++.+++.++.+.
T Consensus 384 ~~~~l~~~~~~~~ 396 (408)
T PRK09874 384 AGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 9988888777665
No 53
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.6e-30 Score=242.83 Aligned_cols=336 Identities=17% Similarity=0.126 Sum_probs=214.8
Q ss_pred CcccccccccccchhhhhHHHH-HH-----HHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHH----
Q 014686 1 MIKDFQIAKREEDIGSYAGYVG-SS-----FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW---- 70 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~-s~-----~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~---- 70 (420)
+.+|++.++.+ .+... +. ..++..+++++.|+++||+|||++++.+..++.++.++++++++++
T Consensus 41 i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (434)
T PRK15075 41 IAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGL 114 (434)
T ss_pred HHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 35788887766 44332 22 2333457899999999999999999999999999999999999987
Q ss_pred ----HHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccC-Cccccccccc
Q 014686 71 ----MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSSESLF 144 (420)
Q Consensus 71 ----~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~-~~~~gw~~~~ 144 (420)
.++++|+++|++.+...+. ..+++|++|+|+|++++++...+.++|..+++.+++.+....... ...+|||
T Consensus 115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr--- 191 (434)
T PRK15075 115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWR--- 191 (434)
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH---
Confidence 4688999999999988886 899999999999999999999999999988888888775311000 0034444
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHH-H
Q 014686 145 GKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI-I 223 (420)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 223 (420)
.++....+............||+++..+++ ++++.+...++..++++.+... .
T Consensus 192 ------~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 245 (434)
T PRK15075 192 ------IPFLIGCLIVPFIFLIRRSLEETEEFLARK--------------------HRPSMREIFRSLAANWRIVLAGML 245 (434)
T ss_pred ------HHHHHHHHHHHHHHHHHHhcCCCHHHHHhh--------------------hccccccHHHHHHHhHHHHHHHHH
Confidence 444543332222222222223221100000 0000111123334454444332 2
Q ss_pred HHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014686 224 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
..++..........+.|.|+.+. .|++..+.+.......++.+++.+ +.+++.||++||+....+.........
T Consensus 246 ~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 319 (434)
T PRK15075 246 MVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWLP-IGGALSDRIGRRPVLIAFTVLAILTAY 319 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 22223333444556677777654 688888888888888888888877 778899999999887765544332211
Q ss_pred -HHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHH-HHHHHhhhhhhHHHHhh
Q 014686 304 -SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS-LFKAAGPAGGGALFSWA 380 (420)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~g~~~~g~l~~~~ 380 (420)
........+ ... .......+.+++.....+.......|..|++.|+++.|+.+.+.. +++.++|.+.|.+.|..
T Consensus 320 ~~~~~~~~~~--~~~-~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 320 PALSWLVAAP--SFA-RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHcCC--chH-HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 111111111 111 111111222233344455566778899999999999999766555 45888999999999987
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=2.6e-30 Score=237.79 Aligned_cols=323 Identities=19% Similarity=0.222 Sum_probs=226.4
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.|+++ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+.+.++++++.+++.|+++|+
T Consensus 18 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 91 (377)
T PRK11102 18 AADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91 (377)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 4788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+|+|++++++......+|..++|.+++.+.+ ..|||+. +...++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~~~~---------~~~~~~~~ 155 (377)
T PRK11102 92 AAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-------WFSWHAI---------FWVLALAA 155 (377)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcChHHH---------HHHHHHHH
Confidence 98888777 8999999999999999999999999999999999999987 4455444 35555544
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++. +...+++||+++++++++.+.+ +.....++.+|+|+++...+...+.......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (377)
T PRK11102 156 ILAAALVFFFIPETLPKERRQPFHLR------------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAG 217 (377)
T ss_pred HHHHHHHHHhCCccCcccccCCCChH------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 443 3445667776433211110000 001124567788887766655544443334443344
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.++.+. .|+++.+.+.......+..+++++ ..+++.||.++|+....+..+..+..+........+ ...+..
T Consensus 218 ~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 290 (377)
T PRK11102 218 PFVYIEL-----NGVSPQNFGYYFALNIVFLFVMTI-INSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-LGFWAL 290 (377)
T ss_pred HHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHH
Confidence 4444333 688999999999999999988887 677788888999988887765444333222221111 111211
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH-HHHHHHhhhhh
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAGG 373 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~ 373 (420)
..... ..........+.......|..| ++++++.++.+... .++..+++.+.
T Consensus 291 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 291 VVGVA-AFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHH-HHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1222223334444455666555 89999999987765 45555555543
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7.7e-31 Score=250.10 Aligned_cols=360 Identities=16% Similarity=0.168 Sum_probs=241.6
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.|+++ .+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.++++|++.+++.|++.|+
T Consensus 47 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (496)
T PRK03893 47 QGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGM 120 (496)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5789999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..++.|++|+|+|++++++...+.++|..++|.+++.+.+ ..+||+.| .+..+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~w~~~f---------~~~~~~~ 184 (496)
T PRK03893 121 GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP-------VWGWRALF---------FIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCHHHHH---------HHHHHHH
Confidence 98887776 8999999999999999999999999999999999999987 55666544 4433333
Q ss_pred HHHHHHHHhcccccCCCCCCCCccc--chhHhhhhhhhhhhh--------------hhcCCCCch---------------
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASAEVKE--------------EEGREATPK--------------- 209 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~~~~~--------------- 209 (420)
+..++....+||+++++++++++.+ +..+.......+... ........+
T Consensus 185 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (496)
T PRK03893 185 IFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFIS 264 (496)
T ss_pred HHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHH
Confidence 3333444556766543221111110 000000000000000 000000000
Q ss_pred --hh-hccc-hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014686 210 --KS-LLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 285 (420)
Q Consensus 210 --~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (420)
.+ ..++ +.........+...........+.|.|+.+. +|++..+.+.+.+...++.+++++ ..+++.||+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~~~~~g~~~~~~~~~~~~g~~-~~g~l~dr~ 338 (496)
T PRK03893 265 FMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYDPHTVANVLFFSGFGAAVGCC-VGGFLGDWL 338 (496)
T ss_pred HHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 00 0000 0011111111111111122345677777544 789999999999999999999987 778888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHH
Q 014686 286 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 365 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (420)
++|+.+..+..+..+..+....... .. ........+..+....+..+....+.++.+|+++|++++|+.+....+|
T Consensus 339 g~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 414 (496)
T PRK03893 339 GTRKAYVCSLLISQLLIIPVFAIGG---AN-VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALG 414 (496)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccc---cH-HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHH
Confidence 9988877766554444333222111 11 1111122222222233344566678889999999999999999999999
Q ss_pred HHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHH
Q 014686 366 KAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 403 (420)
Q Consensus 366 ~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~ 403 (420)
+.++|.+.|.+.|.. |++..+...+..+
T Consensus 415 ~~lgp~l~g~l~~~~----------g~~~~~~~~~~~~ 442 (496)
T PRK03893 415 GALAPILGALIAQRL----------DLGTALASLSFSL 442 (496)
T ss_pred HHHHHHHHHHHhccC----------ChHHHHHHHHHHH
Confidence 999999999999987 7777775555433
No 56
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=1.1e-30 Score=241.75 Aligned_cols=336 Identities=15% Similarity=0.110 Sum_probs=232.8
Q ss_pred HHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHhhhhccchhhh-Hhhhh
Q 014686 24 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYAC 94 (420)
Q Consensus 24 ~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~-~~~i~ 94 (420)
...++..+++++.|+++||+|||+++..+.++..++.++++++++++ .+++.|+++|++.+...+. ..++.
T Consensus 43 ~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 122 (394)
T TIGR00883 43 AGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLA 122 (394)
T ss_pred HHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhh
Confidence 34455567899999999999999999999999999999999998875 4888999999998888886 99999
Q ss_pred hhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhccccc
Q 014686 95 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 174 (420)
Q Consensus 95 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 174 (420)
|++|+|+|++..+....+..+|.++++.++..+... .+.... ..++||.++.+.++..++........||++
T Consensus 123 ~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~-------~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (394)
T TIGR00883 123 EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL-------LGDDAL-LEWGWRIPFLVSAVLVLIGLYLRRNLEETP 194 (394)
T ss_pred hcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCHHHh-hccchHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 999999999999999999999999999988776531 110000 034566666666655555444445566654
Q ss_pred CCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchh--HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCcc
Q 014686 175 HRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL 252 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
++++++++ +++...+.++.+++++ ++......++..........+.|.|..+. .
T Consensus 195 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 250 (394)
T TIGR00883 195 VFEKAQEK-------------------HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----L 250 (394)
T ss_pred hHHHHHhc-------------------cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 32211100 1111233455666655 55555555555555555566777777544 6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
|.++.+.+.......+...++.+ +.+++.||+++|+.+.....+..... .......... . ...........++..
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g~~~ 326 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIP-LSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSG--S-FTLFFFLVLGLALIG 326 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCC--c-hHHHHHHHHHHHHHH
Confidence 88888999988888888888877 67788888999887765544433322 2221111111 1 112223334444555
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHH-HHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEA 404 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~ 404 (420)
....+.......|.+|+++|+++.++.. ....+|..++|.+.|.+.|..+ .++..++...+..+
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g---------~~~~~~~~~~~~~l 391 (394)
T TIGR00883 327 GMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG---------DWYAIGYYLAALAL 391 (394)
T ss_pred HHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC---------cchhHHHHHHHHHH
Confidence 6677888899999999999999999854 4457888899999999999872 26666665555444
No 57
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2.6e-31 Score=250.23 Aligned_cols=361 Identities=11% Similarity=0.044 Sum_probs=235.9
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+.+|+|++.++ .+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.+++++++.+++.|+++|
T Consensus 62 l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 62 IRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 35789999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccccc--CCccccccccccCccchHHHHHHHH
Q 014686 81 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK--YPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 81 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~--~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
++.+...+...+++|++|+++|++++++.....++|..+++.+.+.+...... .....||| ..+.+.++
T Consensus 136 ~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr---------~~f~i~g~ 206 (476)
T PLN00028 136 FSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWR---------IAFFVPGL 206 (476)
T ss_pred HHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhH---------HHHHHHHH
Confidence 98876655567889999999999999999888888888777666554321000 00123454 44466666
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 159 FAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 159 ~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
+.++..+..+++++++++.+.+ + . ++. .+.++++.....++.++++++|...+.+++..........+
T Consensus 207 l~l~~~l~~~~~~~~~p~~~~~--~---~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (476)
T PLN00028 207 LHIIMGILVLTLGQDLPDGNYR--E---L----KKS---GTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNI 274 (476)
T ss_pred HHHHHHHHHHHHcCcCCCCchh--h---H----Hhc---CccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhH
Confidence 6655444444444432211100 0 0 000 00000001123456678888887776665555544555667
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH-------HHHHHHHHHHHHHHHHHHHHHh
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-------VARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
.|.|+.+. .|++..+++.+.+..+++.+++++ +.+++.||+++|+ .......+..+....+....
T Consensus 275 ~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~~-~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~-- 346 (476)
T PLN00028 275 IAEYFYDR-----FGLSLETAGAIAASFGLMNLFARP-AGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN-- 346 (476)
T ss_pred HHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--
Confidence 77776544 789999999999999999999988 7788888877641 11122222212122211111
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
. ... ......+.+++.....+....+..+ .+++++|++.|+.+....+|+.++|.+. +... . .+
T Consensus 347 -~--~~~-~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~g~lg~~i~~~l~----~~~~-~------~~ 410 (476)
T PLN00028 347 -S--LGA-AIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLTGAGGNVGAVLTQLLF----FTGS-S------YS 410 (476)
T ss_pred -h--HHH-HHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhhhccccHHHHHHHHHH----HhcC-C------cc
Confidence 1 111 1111222222233334445555555 4568999999998777777776666544 3211 0 16
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 014686 392 SQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|...|++.+++.+++.++.+.
T Consensus 411 y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 411 TETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HhhHHHHHHHHHHHHHHHHHh
Confidence 888999998888888776655
No 58
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=5.1e-30 Score=237.65 Aligned_cols=324 Identities=18% Similarity=0.158 Sum_probs=235.9
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.++++ .+++.+++.++..++++++|+++||+|||+++..+..+..++.+++.++++++.+++.|+++|+
T Consensus 33 ~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (401)
T PRK11043 33 QADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV 106 (401)
T ss_pred HHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+++|++..+.......+|..++|.+++.+.+ ..|||..| ...++..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~~g~~~~~---------~~~~~~~ 170 (401)
T PRK11043 107 GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-------HFGWQAIF---------ATLFAIT 170 (401)
T ss_pred hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCChHHHH---------HHHHHHH
Confidence 98877776 8899999999999999999999999999999999999988 45555444 5555555
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS 240 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
++..+..++++|++++++++ + ++...++++|+|+++...+...+.......+..+.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 227 (401)
T PRK11043 171 LLLILPTLRLKPSKKARKQS----Q-------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSP 227 (401)
T ss_pred HHHHHHHHHcCCCCCccccc----h-------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 55444445555543221100 0 012346677888877655554444444445555666
Q ss_pred HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 014686 241 LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLL 320 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (420)
.+..+ .|+++.+.+.......++.+++++ ..+++.||+++++..........+................+ ..
T Consensus 228 ~~~~~------~g~s~~~~g~~~~~~~~~~~~g~~-~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 299 (401)
T PRK11043 228 FILEQ------MGYSPADIGLSYVPQTIAFLVGGY-GCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLV-PL 299 (401)
T ss_pred HHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHH-HH
Confidence 65532 588999999888777777778777 66777788888887665555444443332222111111111 22
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
.......+.......+.......+..| +++|++.|+.+..+..++..++.+.|.+.+.
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 300 LIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 222333444555666776666666555 6899999999999999999999999998774
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.5e-29 Score=232.55 Aligned_cols=339 Identities=14% Similarity=0.130 Sum_probs=250.8
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhH----HHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGTASVVIFNTLFGLSVNFWMAVLTRF 77 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 77 (420)
.+|+|.|..| +|++.+++.+...++++++|+++||+|||+.. ..+..+..+ ..+..+++++.+++.|.
T Consensus 31 l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~ 102 (382)
T TIGR00902 31 LKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIG 102 (382)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHH
Confidence 3678999999 99999999999999999999999999985433 222222222 24446789999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
++|.+.+...|. .++..|+ +++|+++++......++|.+++|++++.+.+ .+|||..| ...
T Consensus 103 l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~-------~~g~~~~f---------~~~ 164 (382)
T TIGR00902 103 LFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG-------MFDEQNIL---------AIL 164 (382)
T ss_pred HHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH-------HcChhHHH---------HHH
Confidence 999987777776 6766553 5788999999999999999999999999998 66776555 333
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
.+..++. +..+.++|++++++++++ + ++++.+..++++|||+++...+..++.......+.
T Consensus 165 ~~~~~~~-~~~~~~~~~~~~~~~~~~--~----------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~ 225 (382)
T TIGR00902 165 TAGLAFM-LIGFLIKPTIPPKDAIPE--D----------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYY 225 (382)
T ss_pred HHHHHHH-HHHHHcCCCCCCCccccc--c----------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 3332222 222333443211111100 0 00112345788999999988888888777777888
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
++.|.|..+ .|.++.++|.......+..++... ..+++.||+++|+.+..+.+...+....+...++
T Consensus 226 ~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~~-~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~------ 292 (382)
T TIGR00902 226 GFSAIYWQA------AGISASATGLLWGIGVLAEIIIFA-FSNKLFQNCSARDLLLISAIACVGRWAIIGAIEA------ 292 (382)
T ss_pred HHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhh------
Confidence 888887753 689999999999987777777765 7778888889999999888888887776654322
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHH-HHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
...+.....+.++......+....++++. |++++++++++.+. ...+|..++|.++|.++|+. |+ ..
T Consensus 293 ~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~----------g~-~~ 360 (382)
T TIGR00902 293 FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL----------GA-GT 360 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cH-HH
Confidence 22344455666666777888888888887 99999999999874 56899999999999999998 64 66
Q ss_pred HHHHHHHHHHHHHHH
Q 014686 396 FFVLNVVEAIGVLMT 410 (420)
Q Consensus 396 f~~~~~~~~~~~~~~ 410 (420)
|...+.+.+++.++.
T Consensus 361 ~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 361 FVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888877765543
No 60
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.8e-29 Score=233.20 Aligned_cols=319 Identities=19% Similarity=0.195 Sum_probs=224.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++|+|.++++ .++..+.+.++..+++++.|+++||+|||++++.+.++..++.+.+..+++++.+++.|+++|+
T Consensus 30 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 103 (392)
T PRK10473 30 AADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGI 103 (392)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 5788999988 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+++|+++.++.+....+|..++|.+++.+.+ ..|||..| .+.++..
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-------~~g~~~~~---------~~~~~~~ 167 (392)
T PRK10473 104 GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-------KFPWQSLF---------YTMAAMG 167 (392)
T ss_pred hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CcChHHHH---------HHHHHHH
Confidence 98887776 9999999999999999999999999999999999998877 44555443 5555544
Q ss_pred HHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++. ++..+.+||+++++++++ .+ ..+..++.+|+++++...+...+.......+..+.
T Consensus 168 ~i~~~~~~~~~~~~~~~~~~~~--~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (392)
T PRK10473 168 ILVLLLSLFILKETRPARAPAA--SS-------------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTS 226 (392)
T ss_pred HHHHHHHHHHcCCCCCcccCCc--cc-------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 443 344566777653321110 00 01122456777776654444433333333344444
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|.+..+. +|+++.+.+......++..+++.. ..+++.||+++|+....+..+..++........... ...
T Consensus 227 ~~~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 296 (392)
T PRK10473 227 PVLLMEQ-----MGFSRGEYAIIMALTAGVSMTVSF-STPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHA----VSL 296 (392)
T ss_pred HHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Confidence 5554433 688999999999988999999887 677888899999998888877766665554432211 111
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
........+. ....+. ....+..|.++|+ |..+....+++.+++.+.+.+.+..
T Consensus 297 ~~~~l~~~g~--~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 297 FGITLICAGF--SVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHH--HHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111 111111 2223334544443 5555666788888888888898887
No 61
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-31 Score=230.62 Aligned_cols=360 Identities=14% Similarity=0.122 Sum_probs=281.5
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhH---HHHHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF---WMAVLTRF 77 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~---~~l~~~r~ 77 (420)
|.+|+|+|++| .+++.++..+...+..++.|.+.||||.|++...+.++..+-.+..+++.+. +++++.++
T Consensus 40 i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 40 IKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred hccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 46899999999 9999999999999999999999999999999999999999999999998544 59999999
Q ss_pred HhhhhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHH
Q 014686 78 LLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 78 l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
+.|++.+.+.....++++++|||++|.++|+.. ..|+|..+...++..+.. .+|+. .|+....+..
T Consensus 114 l~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~-------~~g~~------~w~~~~~i~~ 179 (417)
T COG2223 114 LLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV-------AFGFL------AWRNVAGIYV 179 (417)
T ss_pred HHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH-------HHhhH------HHHHHHHHHH
Confidence 999998888877999999999999999999999 999999999999988887 55510 1333333333
Q ss_pred HHHHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 158 LFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 158 ~~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
+..++ .+..++...|.|+.++..++.. +...+.++++++.|...+.++........+.
T Consensus 180 ~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs 238 (417)
T COG2223 180 VALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFS 238 (417)
T ss_pred HHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHH
Confidence 33333 4455666666655322221111 0345678889999999999999999999999
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-hH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG-FG 315 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 315 (420)
.++|.|+++. ++.++.++|.......+.+.+.+. .+++++||+|.+|+.......++++............ ..
T Consensus 239 ~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~Rp-~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~ 312 (417)
T COG2223 239 AYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALARP-LGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGG 312 (417)
T ss_pred HHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHHh-ccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCc
Confidence 9999999887 899999999999998999999988 8999999999999888888777777666655432211 01
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
.........+..+.+...-+...+.++..++| ++.|.+.|+....+.+|+..-|...|..++.++ .+...
T Consensus 313 ~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg---------~~~~~ 382 (417)
T COG2223 313 SFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG---------SYTGA 382 (417)
T ss_pred chHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc---------cHHHH
Confidence 11112222222223334444555566666555 689999999999999999999999999999983 58899
Q ss_pred HHHHHHHHHHHHHHHhhhhhhc
Q 014686 396 FFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 396 f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
|+++..+.+++.+..+..+.++
T Consensus 383 f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 383 FMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999988776634444
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=6.1e-30 Score=233.06 Aligned_cols=323 Identities=25% Similarity=0.371 Sum_probs=266.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.++++ .+++.+...++..+++++.|+++||+|||+.+..+..+..++.+...++++++.+++.|++.|+
T Consensus 26 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 99 (352)
T cd06174 26 AEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL 99 (352)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 3567888888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. .+++.|++|+|+|++.+++.....++|..++|.+++.+.+ ..+|| ..+...++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~---------~~~~~~~~~~ 163 (352)
T cd06174 100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------SLGWR---------WLFLILAILG 163 (352)
T ss_pred ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-------HhhHH---------HHHHHHHHHH
Confidence 99988887 9999999999999999999999999999999999999988 44444 3335555555
Q ss_pred HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHH
Q 014686 161 FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS 240 (420)
Q Consensus 161 ~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
++..+...+++ |.++...+..++..........+.+
T Consensus 164 ~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (352)
T cd06174 164 LLLALLLLFLL--------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLP 199 (352)
T ss_pred HHHHHHHHHHH--------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 55444333332 4455666666666666677777777
Q ss_pred HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 241 LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
.+..+. .+.+..+.+.......++..++.. ..+++.||.++|+ .+..+..+..++......... ...
T Consensus 200 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~ 267 (352)
T cd06174 200 LYLQEV-----LGLSAAEAGLLLSLFGLGGILGAL-LGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS------LAL 267 (352)
T ss_pred HHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc------HHH
Confidence 777654 588999999999999999999988 6677788889988 888887777777666554332 223
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVL 399 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~ 399 (420)
......+.+.+.....+.......|..|+++|++..|+.+...+++..++|.+.|.+.|.. +++..+.+.
T Consensus 268 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~----------~~~~~~~~~ 337 (352)
T cd06174 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG----------GYGGVFLIL 337 (352)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------CcchHHHHH
Confidence 3445555666777788899999999999999999999999999999999999999999866 889999999
Q ss_pred HHHHHHHHHHHhh
Q 014686 400 NVVEAIGVLMTFK 412 (420)
Q Consensus 400 ~~~~~~~~~~~~~ 412 (420)
+++.+++.+..+.
T Consensus 338 ~~~~~i~~i~~~~ 350 (352)
T cd06174 338 AALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHhee
Confidence 9988888776543
No 63
>TIGR00895 2A0115 benzoate transport.
Probab=99.98 E-value=6.5e-30 Score=237.05 Aligned_cols=340 Identities=19% Similarity=0.230 Sum_probs=235.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|+
T Consensus 44 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 117 (398)
T TIGR00895 44 SAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGL 117 (398)
T ss_pred hhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhc
Confidence 4678999888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHH-HH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS-LF 159 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~-~~ 159 (420)
+.+...+. .+++.|++|+++|++++++...+..+|..++|.+++.+.+ ..||+..+ ...+ +.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~g~~~~~---------~~~~~~~ 181 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-------VFGWRSLF---------YVGGIAP 181 (398)
T ss_pred ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh-------cccceeeh---------hhhhhHH
Confidence 99988887 9999999999999999999999999999999999999987 56776655 3443 33
Q ss_pred HHHHHHHHHhcccccCCCCCCCCcc-cchhHhhhhhhhhh-----hhhhc--CCCCc-hhhhccchh---HHHHHHHHHH
Q 014686 160 AFGVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASAEV-----KEEEG--REATP-KKSLLKNWP---LMSSIIVYCV 227 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~--~~~~~-~~~~~~~~~---~~~~~~~~~~ 227 (420)
.+...+...++||+++...++++++ .+..++......++ +++++ +..+. .+.+++++. .+...+..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (398)
T TIGR00895 182 LLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFM 261 (398)
T ss_pred HHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHH
Confidence 3334445667788765432221111 11101111000000 00000 00111 122333222 2222233333
Q ss_pred HHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014686 228 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
..........+.|.+.. . .|+++.+.+.......++.+++.+ +.+++.||+++|+........ .+.......
T Consensus 262 ~~~~~~~~~~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 333 (398)
T TIGR00895 262 LLVGVYFLTNWLPKLMV-E-----LGFSLSLAATGGALFNFGGVIGSI-IFGWLADRLGPRVTALLLLLG-AVFAVLVGS 333 (398)
T ss_pred HHHHHHHHHHHHHHHHH-H-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcchHHHHHHHHHH-HHHHHHHHH
Confidence 33333344445553332 2 688899999999999999999987 778888888888444333332 222222222
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 308 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
.. .. ........++.+++.....+...+...|.+|+++|+++.|+.+.+..+|..++|.+.|.+
T Consensus 334 ~~--~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 334 TL--FS---PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred Hh--hC---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 11 11 112233344455666777888899999999999999999999999999999999999875
No 64
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=3.2e-29 Score=232.05 Aligned_cols=364 Identities=12% Similarity=0.022 Sum_probs=246.7
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCC-chhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
++++|.+.+| .|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+.++++.+.+.|++.|
T Consensus 30 ~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 103 (418)
T TIGR00889 30 SKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANS 103 (418)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4678999999 9999999999999999999999999965 77888888888888888889999999999999999
Q ss_pred hhccchhhh-Hhhhh--------hhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchH
Q 014686 81 SLNGLLGPI-KAYAC--------EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 151 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 151 (420)
++.+...+. .++.. |......|.|..| .+|.++||.+++.+.. ...|+
T Consensus 104 ~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~----------------~~~~~- 160 (418)
T TIGR00889 104 LAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI----------------ELSNI- 160 (418)
T ss_pred HHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc----------------cchhH-
Confidence 987766654 44432 2223334455444 4788899999887743 11122
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhh
Q 014686 152 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
++.+.++..++..+..+.+||+++.+++++ .+. ++..+...++++|+|+++...+..++....
T Consensus 161 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~--------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 223 (418)
T TIGR00889 161 QLYITAGSSALLGVFALTLPDIPVAKSTAK---MSI--------------KVMLGLDAFILFKNKRMAIFFFFSMLLGAP 223 (418)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCccccc---cCH--------------HHHhhhhHHHHhcCCCeeeHHHHHHHHHhH
Confidence 233444444444445567788753221111 000 000112345678888887766666665544
Q ss_pred hhhHHHHHHHhhcCcccCC--ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 014686 232 DMAYSEIFSLWANSPKKLG--GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
......+.+.|..+.-... ..+++....+...+...+..+++.+ ..+++.||+++|+.+..+.++..+....+....
T Consensus 224 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~-~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~ 302 (418)
T TIGR00889 224 LQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFIL-TIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD 302 (418)
T ss_pred HHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444445555554320000 0123456778889988888888876 677788888999999988887777655544421
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHH-HHHHHHHHHhhhhhhHHHHhhhhccCCCC
Q 014686 310 MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQKRLDASF 388 (420)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 388 (420)
. .......+.+..++.+.......+....+++|.+|+++|++++|+.+ ....+|..+||.+.|.++|+.++...
T Consensus 303 ~--~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~--- 377 (418)
T TIGR00889 303 P--EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGT--- 377 (418)
T ss_pred c--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccC---
Confidence 1 11112223334444555555667777888999999999999999997 56789999999999999998642110
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 389 LPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 389 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.||+..|.+.+++.+++.++.++ ..||++
T Consensus 378 -~~~~~~f~~~~~~~~i~~~l~~~-~~~~~~ 406 (418)
T TIGR00889 378 -FDWQTMWLFFAGYIAILAVLFMI-FFKYSH 406 (418)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHH-HhCCcc
Confidence 05889999988888887777666 555544
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.98 E-value=1.6e-28 Score=226.46 Aligned_cols=341 Identities=14% Similarity=0.159 Sum_probs=222.1
Q ss_pred cccccccccccchhhhhHHHHHHHHH-HHHHhhhhhhhhhhhcCCchhH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMGTASVVIFNTLFGLSVNFWMAVLTRFLL 79 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grk~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 79 (420)
++|+|.|+++ .|++.+...+ +..++.++.++ +||+||||.+ ..+.+..+++..+.+++++++.+++.+.+.
T Consensus 43 ~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 115 (393)
T PRK15011 43 TDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFL 115 (393)
T ss_pred HhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 5789999999 9999877655 55555544555 9999998875 556666677788888999999887666555
Q ss_pred hhhccchhhh-Hhhhhhhchhhhh--hhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREEHQ--ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
|...+...|. .+++.|+.++++| +...++.+.+.++|.++||++++.+.+ .+|||..| ...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-------~~gw~~~f---------~~~ 179 (393)
T PRK15011 116 SSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-------GFSFTVMY---------LSA 179 (393)
T ss_pred HHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-------hcChHHHH---------HHH
Confidence 5544566676 7888888776655 345578889999999999999999998 55665444 555
Q ss_pred HHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhH
Q 014686 157 SLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 235 (420)
Q Consensus 157 ~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (420)
++..++. +...+.+||+++++++++++ . + ..++ +++..+...............+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T PRK15011 180 AVAFIVCGVMVWLFLPSMRKELPLATGT---L--------------E-----APRR--NRRDTLLLFVICTLMWGTNSLY 235 (393)
T ss_pred HHHHHHHHHHHHhhcCccCCCCcccccc---c--------------c-----cccc--ccccHHHHHHHHHHHHHHHHHH
Confidence 5555443 34456678765332211000 0 0 0000 1112222222223333333444
Q ss_pred HHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhH
Q 014686 236 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG 315 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
..+.|.|..+. +|+++.+.+.+.....+..+++.+ +.+++.||+++|+....+.....+........ ..
T Consensus 236 ~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~~-~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~-- 304 (393)
T PRK15011 236 IINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTML-IAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA---HS-- 304 (393)
T ss_pred HHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH---hh--
Confidence 45677776554 688998999888776677766666 77888888999887766554444333222211 11
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
.+. ......+.++......+......+|..| ++++++.++.+...++|..++|.+.|.+.|.. +++..
T Consensus 305 ~~~-~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~----------g~~~~ 372 (393)
T PRK15011 305 PAI-LLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW----------NYHAV 372 (393)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhHHH
Confidence 111 1112222222222333444566677776 56999999999999999999999999999987 88899
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014686 396 FFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 396 f~~~~~~~~~~~~~~~~ 412 (420)
|.+.+.+.+++.+..+.
T Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 373 FWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 98888888777666554
No 66
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=5.6e-29 Score=230.11 Aligned_cols=324 Identities=13% Similarity=0.142 Sum_probs=227.9
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+++|.|+.+ .+++.+++.++..+++++.|+++||+|||+++..+..+..++.+.+.++++++.+++.|++.|+
T Consensus 35 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 108 (394)
T PRK11652 35 ARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL 108 (394)
T ss_pred HHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 4688999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.+...+. ..+..|.+++++|+++.+....+..++..++|.+++.+.+ ..|||..| ...++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~~g~~~~f---------~~~~~~~ 172 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-------LFGWRACY---------LFLLLLG 172 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccChHHHH---------HHHHHHH
Confidence 98877776 7888999999999999999999999999999999999987 45555444 5554444
Q ss_pred HH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 161 FG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 161 ~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
++ .....++.||+++++++++ + .....++.+|+|.++...+..+........+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (394)
T PRK11652 173 AGVTFSMARWMPETRPADARRT---R-------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACS 230 (394)
T ss_pred HHHHHHHHHhCCccCccccchh---H-------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 3334556777643221110 0 01234566778877765554444433333334444
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.+..+. +|+++.+.+.......++.++++. ..+++.||.+++... .........+.............+.
T Consensus 231 ~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (394)
T PRK11652 231 GVLMGAV-----LGLSSMTVSILFILPIPAAFFGAW-FAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFGVMNVWT- 301 (394)
T ss_pred hHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccccHHH-
Confidence 5555443 688888999888877777777766 666777776632222 2222222222211111100111121
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
......+.+.+.....|.......+..| +++|++.++.+....+|+.+++.+.+.+.+.
T Consensus 302 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 302 LLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 2233344445556677888888888776 6889999999999999999999988877544
No 67
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=2.6e-28 Score=224.36 Aligned_cols=338 Identities=14% Similarity=0.125 Sum_probs=237.6
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCc----hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 77 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 77 (420)
.+|+|.|.++ +|++.+++.++..++++++|+++||+||| +.+.+..... .......+++++.+++.|+
T Consensus 31 l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~ 102 (382)
T PRK11128 31 LKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIG 102 (382)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHH
Confidence 3678999999 99999999999999999999999999994 3333222221 2233344688999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
+.|++.+...|. .+++.++ +++|+++++......++|.++||++++++.+ .+|||..| ...
T Consensus 103 l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-------~~g~~~~f---------~~~ 164 (382)
T PRK11128 103 LFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-------WFGEQAIL---------WIL 164 (382)
T ss_pred HHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-------HcChhHHH---------HHH
Confidence 999988887776 7777766 4568899999999999999999999999998 56666544 444
Q ss_pred HHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
++..++..+..+..||++++.+++ ++ +++...+.++++|+|+++...+..++.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~----~~---------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 225 (382)
T PRK11128 165 TAGVASMLLGQLLRPTIMPQGESR----QQ---------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYY 225 (382)
T ss_pred HHHHHHHHHHHHccCCCCCccccc----cc---------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHH
Confidence 443333333333445432211100 00 00112456789999999988777776666666666
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
...+.|..+ .|.++.+.|...+...+..++... ..+++.||+++++.+..+.....+..+.....+ ..
T Consensus 226 ~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~-----~~ 293 (382)
T PRK11128 226 GFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIFA-FSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT-----AL 293 (382)
T ss_pred HHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh-----hH
Confidence 677777632 588999999999887787777766 677778888999998888777766655544322 11
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHH-HHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
+ .+.+..++.++......+....+..+. +++++++..+..+.. ..+|..+||.++|.++|.. |. ..
T Consensus 294 ~-~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~----------g~-~~ 360 (382)
T PRK11128 294 P-WLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL----------GA-GV 360 (382)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cH-HH
Confidence 2 223344444555555667777777775 677789999988744 5778899999999999998 55 46
Q ss_pred HHHHHHHHHHHHHH
Q 014686 396 FFVLNVVEAIGVLM 409 (420)
Q Consensus 396 f~~~~~~~~~~~~~ 409 (420)
++..+++.+++.++
T Consensus 361 ~~~~~~~~~~~~~~ 374 (382)
T PRK11128 361 FWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 66667666655443
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.3e-28 Score=224.38 Aligned_cols=322 Identities=16% Similarity=0.083 Sum_probs=233.7
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+++|+|.|+++ .+++.+.+.+++.+++++.|+++||+|||+++..+.++..++.+.+ .+++++.+++.|++.|
T Consensus 26 l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 26 IRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred HHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 36789999999 9999999999999999999999999999999999998888888877 7889999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.+...+. ...+.|++| ++|++++++.+.+.++|..+++.+++.+.+ ..+ ..||..+...++.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~~w~~~f~~~~~~ 163 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------GHWQQALAWWALP 163 (355)
T ss_pred HHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------hhHHHHHHHHHHH
Confidence 998887776 778888886 689999999999999999999999988876 221 1133333443333
Q ss_pred HHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 160 AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
.++. ...++||.++++++++ +......++.+|+|.++...+...+..........+.
T Consensus 164 ~~~~--~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (355)
T TIGR00896 164 ALLA--LLAWIPQVRRRVAANQ---------------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWL 220 (355)
T ss_pred HHHH--HHHHhhhhccccCCCC---------------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222 2233455432211100 0011234567888888776666666555556666777
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
|.|..+ .|+++.+.+...+...++.+++++ ..+++.||+ ++|+....+..+..++.....+.... ..+.
T Consensus 221 p~~~~~------~g~~~~~~g~~~~~~~~~~i~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 290 (355)
T TIGR00896 221 PAILIS------HGASAATAGSLLALMQLAQAASAL-LIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH---GLWA 290 (355)
T ss_pred HHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh---HHHH
Confidence 877753 588999999999999999999988 667778887 45666666666666655544433221 1111
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
...+.+++.....+.......+.. +++++++..++.+....++..++|.+.|.+.|..+
T Consensus 291 ----~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 291 ----WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred ----HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123334555566666655555434 46778999999999999999999999999999884
No 69
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=5.6e-28 Score=227.97 Aligned_cols=351 Identities=13% Similarity=0.133 Sum_probs=241.7
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-----CCchh-HHHHHHHHHHHHHHHhhh---hhHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLFGLS---VNFWMAV 73 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grk~~-l~~~~~~~~~~~~~~~~~---~~~~~l~ 73 (420)
++.|.+.++ +|.+ +.....+ ++.+++|+++||+ ||||. +..+.+..+++....++. ++++.+.
T Consensus 40 ~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~ 111 (491)
T PRK11010 40 TVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA 111 (491)
T ss_pred HhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 345677777 7776 3344444 6899999999999 99886 667777777777777664 4788899
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+.|++.|++.+...+. .+++.|++|+|+|+++.++...+..+|.++++.+++++.+. ..||| ..
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~------~~GWr---------~~ 176 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR------YLGWQ---------GM 176 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------ccCHH---------HH
Confidence 9999999988888777 99999999999999999999999999999999999998861 13454 44
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhh
Q 014686 153 CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+.+.++..++..+..++.||+++..++++ + . +++...+.++.+++++.+...+..++.....
T Consensus 177 f~i~a~l~ll~~l~~~~~~e~~~~~~~~~---~-~--------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~ 238 (491)
T PRK11010 177 YWLMAALLIPCIIATLLAPEPTDTIPVPK---T-L--------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGD 238 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccc---c-h--------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHH
Confidence 46666666555555556777643211100 0 0 0000123455677777666555555554444
Q ss_pred hhHHHHHHHhhcCcccCCccCCchhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 233 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAIT-GFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
.....+.+.|+.+. .|++..+.+...... .++.+++.+ +.+++.||+++|+.+..+..+..+..+.+......
T Consensus 239 ~~~~~~~~~~l~~~-----~G~s~~~~g~~~~~~g~i~~iiG~l-l~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~ 312 (491)
T PRK11010 239 AFAMSLTTTFLIRG-----VGFDAGEVGLVNKTLGLLATIVGAL-YGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT 312 (491)
T ss_pred HHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44445566665433 799999999987544 456777766 88889999998887766555444443333221111
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
. ...+. +.....+..+......+...+...+..+++.+++..|+.+....+|..+++.+.|.+.|.. |
T Consensus 313 ~-~~~~~-l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~----------G 380 (491)
T PRK11010 313 D-KNLYS-MGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH----------G 380 (491)
T ss_pred c-ccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------C
Confidence 1 11111 1222222222223334556777788889999999999999999999999999999999987 8
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 014686 392 SQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|+..|.+.+++.+++.+....
T Consensus 381 ~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 381 WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888766654
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=2.1e-28 Score=228.76 Aligned_cols=348 Identities=21% Similarity=0.207 Sum_probs=262.4
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHhhhhccchhhh
Q 014686 15 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPI 89 (420)
Q Consensus 15 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~ 89 (420)
...++++..+..+...+.++++|.++||++|||+++.+.++.++..+..++. .+.+.+++.-++.|++.+...|+
T Consensus 44 ~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA 123 (524)
T PF05977_consen 44 PLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPA 123 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3449999999999999999999999999999999999988877665555442 47889999999999999999999
Q ss_pred -HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHH
Q 014686 90 -KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 168 (420)
Q Consensus 90 -~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
++++.|..|+++..+++++.+...++..++||.++|.+.. .+|-. ..+.+.++..++.+....
T Consensus 124 ~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva-------~~G~~---------~~f~inalsfl~~i~~l~ 187 (524)
T PF05977_consen 124 WQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA-------FFGAA---------AAFLINALSFLISILALL 187 (524)
T ss_pred HHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH-------HHHHH---------HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 33332 333555554444443334
Q ss_pred hcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCccc
Q 014686 169 WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKK 248 (420)
Q Consensus 169 ~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (420)
..+.++++++.++ +.. .+.-....+.+.++|.+...+...+++++........+|.+..+.
T Consensus 188 ~~~~~~~~~~~~~---e~~--------------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-- 248 (524)
T PF05977_consen 188 RWKPPPPPSSLPR---ERF--------------FSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-- 248 (524)
T ss_pred Hccccccccccch---hhh--------------hhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH--
Confidence 4433221111110 111 111123456666777777666666666666566666778777655
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 328 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
+|.++...|++.+..+++.+++++ +.+++.++.++++.+..+.+..++..+.+.+... .+ ...+..++.|
T Consensus 249 ---l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~-----~~-~~~~~l~l~G 318 (524)
T PF05977_consen 249 ---LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRRLSSRRLVLLASLLFALALLLLALSPS-----FW-LALIALFLAG 318 (524)
T ss_pred ---hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH-----HH-HHHHHHHHHH
Confidence 788999999999999999999998 6777888888888887777777666666555432 12 2334445556
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
+..........+..++..|++.||+++++.++....+..+|..+.|.+.+.. |.+..+.+.++..+++.+
T Consensus 319 ~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~----------g~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 319 AAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF----------GVRTALLIAGAALLLSAL 388 (524)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CHHHHHHHHHHHHHHHHH
Confidence 6667777788889999999999999999999999999999999999999998 788888888777777666
Q ss_pred HHhhhhhhc
Q 014686 409 MTFKPFLAQ 417 (420)
Q Consensus 409 ~~~~~~~~~ 417 (420)
+......++
T Consensus 389 ~~~~~~l~~ 397 (524)
T PF05977_consen 389 IALRFPLRQ 397 (524)
T ss_pred HHHHhcCcc
Confidence 655433443
No 71
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=1.3e-29 Score=232.29 Aligned_cols=332 Identities=13% Similarity=0.064 Sum_probs=225.0
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-NFWMAVLTRFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G 80 (420)
++++|.|+++ .+++.+++.+++.+++++.|+++||+|||+++..+.++..++.+++++++ +++.+++.|+++|
T Consensus 29 ~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 102 (366)
T TIGR00886 29 KDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG 102 (366)
T ss_pred HHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 5789999999 99999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccc---cCCccccccccccCccchHHHHHHH
Q 014686 81 SLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE---KYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 81 ~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~---~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
++.+...+...++.|++|+|+|++++++.....++|..+++.+++.+..... +.+...+||+.| . +..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~-----~---~~~~ 174 (366)
T TIGR00886 103 IAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAF-----V---IVPA 174 (366)
T ss_pred HhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchh-----H---HHHH
Confidence 9876655558899999999999999999998888888888887776654110 001123555433 0 2222
Q ss_pred H-HHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHH
Q 014686 158 L-FAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 236 (420)
Q Consensus 158 ~-~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (420)
+ ..+..++.....+|++++++++++.+.+. +. .+.+++......+.+++|+++...+...+.........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (366)
T TIGR00886 175 GILLLPALLIFFVGADTPPGKPATGKLSFKG--AR-------WSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVS 245 (366)
T ss_pred HHHHHHHHHHHHhcccCCcccccchhccccc--cc-------ccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Confidence 2 22333344455566554322111100000 00 00000111145667888888877777666665556667
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGL 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
.+.|.|..+. +|+++.+.+.+.....+..+++.+ +.+++.||+++|+....+......+..++........ .
T Consensus 246 ~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 317 (366)
T TIGR00886 246 SIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLARP-LGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPL--S 317 (366)
T ss_pred HHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHhh-ccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcc--h
Confidence 7788887655 788999999888888888888877 7788888889887777666555554444433221100 1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 365 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (420)
...................+.......+..| +++|++.|+.+...++|
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 318 LAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 1111111222222223334455666677665 79999999999887765
No 72
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=5.7e-28 Score=222.83 Aligned_cols=338 Identities=13% Similarity=0.098 Sum_probs=238.2
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh---hhhHHHHHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRF 77 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~ 77 (420)
+++++|.|+.| .|++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.+++.. .++++.+++.|+
T Consensus 29 ~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 29 FQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 36789999999 999999999999999999999999999999999999999999888654 468999999999
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccC-Ccccccccc---------ccC
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSSESL---------FGK 146 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~-~~~~gw~~~---------~~~ 146 (420)
+.|++.|...+. ..++.+..|+++|++.+++.+...++|..++|.+++.+....... ....-++.. -..
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 999999998886 889999999999999999999999999999999999886421000 000000000 001
Q ss_pred ccchHHHHHHHHHHHHHHHHHHh--cccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHH
Q 014686 147 FPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 224 (420)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~--l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
.+||.++.+.++..++..+...+ .||.++ + +++ +++.....++++|+|.++...+.
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~---~-~~~------------------~~~~~~~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNH---S-DAK------------------QISFSASLSRLARIRHYREGVIA 240 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---c-ccc------------------cccchhhHHHHHhChhHHHHHHH
Confidence 24667667766655554333322 332111 0 000 00011234567888888887777
Q ss_pred HHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHH
Q 014686 225 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (420)
.+++........++++.|..+. ..+.+....+...+.......++++ ++.++.||.++|+.+........+..++
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~----~~~~~~~~a~~~~~~~~~~~~vGR~-~~~~l~~r~~~~~~l~i~~~~~~~~~ll 315 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRL----IPGMTAGFAANYNIGAMVIFFISRF-IGTWLISYLAAHKVLMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 7777766666667777776432 1244444445555555566677777 7788888889999888887777766666
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 305 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
...... ... .......+++...++|...++..+..+++.+..+.++.... +|+++.|.+.|.+.|..
T Consensus 316 ~~~~~~---~~~----~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 316 SIFAGG---HVG----LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHcCC---hHH----HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 554322 111 12233334566777799999999988877665555555543 99999999999999954
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=1.7e-27 Score=220.46 Aligned_cols=348 Identities=15% Similarity=0.188 Sum_probs=236.3
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-----CCch-hHHHHHHHHHHHHHHHhhh---hhHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTASVVIFNTLFGLS---VNFWMAV 73 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grk~-~l~~~~~~~~~~~~~~~~~---~~~~~l~ 73 (420)
+|.|.|.+| +|++..+... .+..+++|+++||+ |||| .+..+.++.+++....++. ++++.++
T Consensus 27 ~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~ 98 (402)
T PRK11902 27 TVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA 98 (402)
T ss_pred HHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence 456999999 9999777775 58999999999999 8765 6888888888888777776 4578888
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+..++.+...+...|. .+++.|++|+|||+++.++...+.++|.++++.+++.+.+. ..||| ..
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~------~~gw~---------~~ 163 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR------VLGWG---------NT 163 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc------ccCHH---------HH
Confidence 8888888888888887 99999999999999999999999999999999999988861 12454 44
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhh
Q 014686 153 CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+.+.++..++..+..++.||+++++++++ +. +++..+..++++|||.++...+..++.....
T Consensus 164 f~i~a~~~l~~~l~~~~~~e~~~~~~~~~----~~--------------~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~ 225 (402)
T PRK11902 164 YLLMAGLMLAGALTTLWAPEPEVPARPPR----SL--------------GEAVVGPLRDFFSRRGAWALLLLIVLYKLGD 225 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccc----hh--------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHH
Confidence 46666555554444566777644321110 00 0001123567889998887766655555433
Q ss_pred hhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 233 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS-LLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
.....+.+.+..+. .|+++.+.+......+.. .+++.. +.+++.||+++|+.+..+..+..+..+.+......
T Consensus 226 ~~~~~~~~~~l~~~-----~G~~~~~~g~~~~~~~~~~~i~g~~-~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~ 299 (402)
T PRK11902 226 AFAGSLSTTFLIRG-----AGFSAGEVGIVNKTLGLAATIVGAL-AGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT 299 (402)
T ss_pred HHHHHHHHHHHHHh-----cCCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33323333343332 689999999988665554 566655 78888888898888776665554444333221111
Q ss_pred hhhHHHHHHHH---HHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCC
Q 014686 312 SGFGLAFLLNC---ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASF 388 (420)
Q Consensus 312 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~ 388 (420)
.. ..+..... ..+..+.......+....++++..|.++ .+..+....++...++.+.|.++|..
T Consensus 300 ~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~-------- 366 (402)
T PRK11902 300 PK-HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAY-------- 366 (402)
T ss_pred CC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 11 11211111 1123334444555666666666666544 45556666778877777999999998
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhh
Q 014686 389 LPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 389 ~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|++..|.+.+.+++++.++.+.
T Consensus 367 --G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 367 --GWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999888888766554
No 74
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-30 Score=227.92 Aligned_cols=342 Identities=18% Similarity=0.116 Sum_probs=227.9
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++.+|+++++ .|++.+.+.+.+++++|+.|+++||++||+++.+|..++.++.+.++++..||++.++|.+.|+
T Consensus 60 ~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGi 133 (493)
T KOG1330|consen 60 QTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGI 133 (493)
T ss_pred HHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5788999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcccc-ccccccCccchHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS-SESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~g-w~~~~~~~~~~~~~~~~~~~ 159 (420)
|++.+.|. +.+++|.+|+++|++++++++.+.++|..+|.+.+..+.+ ..+ ||+.| ...+++
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~-------~~~~Wr~af---------~~~avl 197 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS-------LTFWWRWAF---------RGSAVL 197 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc-------CccceEEEE---------EeehHH
Confidence 99999998 9999999999999999999999999999999999998887 333 55554 345555
Q ss_pred HHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 160 AFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 160 ~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
.++. ++..++.+|+++..+.+.+.+.+. ........++.+.+.|++.+....+.+....+...++.-+
T Consensus 198 ~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww 266 (493)
T KOG1330|consen 198 GVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWW 266 (493)
T ss_pred HHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchh
Confidence 5543 445566777665432222211110 0001111233455566666666556555555555555556
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHH-------HHHHHHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL----GPIMVARIAGVLT-------IPLLTSYPY 307 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~ 307 (420)
.|.+.+..... .|++......+..+...++.++.+ .++.++||+ .+....+...+.+ +..+.+.+.
T Consensus 267 ~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGvl-~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~ 343 (493)
T KOG1330|consen 267 APAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGVL-FGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA 343 (493)
T ss_pred hhhHHHHHHHH--hCCccccchhhhhHHHhhchhhhe-ehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh
Confidence 66555443322 345555555555555666666655 666666663 2212222222111 111112211
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhHHHHH-HHHHHhhhcCCcchhhHHhhHHHHHHH-HHHHHhhhhhhHHHHhhhhcc
Q 014686 308 IAMLSGFGLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMS-LFKAAGPAGGGALFSWAQKRL 384 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~g~~~~g~l~~~~~~~~ 384 (420)
... .... .....++.+......+. ....+..+.+||++|.++.++-..+.. +|.+-+|.+.|.+.|+..+..
T Consensus 344 ~~~----~s~~-~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 344 FTS----SSMI-FGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred hhh----HHHH-HHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 111 1111 11111212222222222 333566788999999999999888875 555556669999999986554
No 75
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.3e-28 Score=226.52 Aligned_cols=342 Identities=15% Similarity=0.109 Sum_probs=244.0
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
+.+|.+...++ .+.+.+++.++++++.++.+.+.||++-.+.+..+.+++++..++....+|++.+++.|++.|
T Consensus 72 ~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 72 LKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLG 145 (495)
T ss_pred Cccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 35778888888 999999999999999999999999999999999999999999888888999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
+.++...|+ ..+++.|+.+++|++.++++.+..++|.++|++++..+.+ ..+-....|||+.| ++.+++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~~~gW~~~F---------iI~G~i 215 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGGLAGWRWLF---------IIEGVI 215 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCCcCCceeeh---------hHHHHH
Confidence 999999998 9999999999999999999999999999999999999765 22333366777666 777777
Q ss_pred HHHH-HHHHHhcccccCCCCCCCCcccchh-HhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHH
Q 014686 160 AFGV-TIAAFWLPETLHRHNDDDDSCDVSY-DALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 237 (420)
Q Consensus 160 ~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
.+.. ++..+++|+.|.+..-.+++++... ++.++...+.. +++.+....++.+++|..|...+..++......++.+
T Consensus 216 ~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~ 294 (495)
T KOG2533|consen 216 TLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGI-ENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSY 294 (495)
T ss_pred HHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCc-ccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHH
Confidence 7664 5567889999876533222222111 11111111111 1114556788999999999999999999999999999
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL----GPIMVARIAGVLTIPLL-TSYPYIAMLS 312 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 312 (420)
+.|.|+.+. .|++..++..+..+..++++++.+ +.+++.||. .+|........+..... ..+.......
T Consensus 295 ~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~i-~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~ 368 (495)
T KOG2533|consen 295 WLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGLI-LAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLP 368 (495)
T ss_pred HHHHHHHcC-----CCcChHHhccccchHHhhhHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 999999763 689999999999999999999977 788888884 34443333333322222 2222221111
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHH-hhHHHHHHHHHHHHhhh
Q 014686 313 GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAA-NGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~~~g~~~g~~ 371 (420)
......+..........+......++...++.|... .+......+.++.++|.
T Consensus 369 ------~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~ 422 (495)
T KOG2533|consen 369 ------GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQ 422 (495)
T ss_pred ------HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhh
Confidence 111112222233445556666666666655444333 33333334444444443
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.4e-28 Score=226.60 Aligned_cols=353 Identities=12% Similarity=0.075 Sum_probs=226.6
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh---hhhh-----HHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LSVN-----FWMAV 73 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~ 73 (420)
++++|+|+.+ .|++.+++.+++.++++++|+++||+|||++++.+..+.++...... .++. +....
T Consensus 38 ~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (420)
T PRK09528 38 HDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAI 111 (420)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999 99999999999999999999999999999999887666554433221 1111 11122
Q ss_pred HHHHHhhhhccchhhhHhhhhhhch--hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchH
Q 014686 74 LTRFLLGSLNGLLGPIKAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 151 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 151 (420)
+.++..|.+.....+. +.++.+ ++++++.++......++|..++|++++.+.+ .+|+ .
T Consensus 112 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--------~~~~---------~ 171 (420)
T PRK09528 112 VGGIYLGFGFLAGAGA---IEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN--------INPQ---------I 171 (420)
T ss_pred HHHHHhhhhhccchhh---hhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh--------cCch---------H
Confidence 2333334333333332 233322 3456778889999999999999999999875 2444 3
Q ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhh
Q 014686 152 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
++...++..++..+..+..+++++++++.++++++ ++++.+.++.++.+|||+++...+........
T Consensus 172 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~ 238 (420)
T PRK09528 172 NFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA-------------NASAVSLKDALALLKLPKFWFLVLYVIGVACF 238 (420)
T ss_pred hHHHHHHHHHHHHHHHhcccccccchhhhccchhc-------------ccccccHHHHHHHccCCCeEeehHHHHHHHHH
Confidence 34555555555444444443332221111000000 00111112345677888876655544444333
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
........|.|..+.. .+.+.+..+.+.+.+...+...++.+ ..+++.||+++|+.+..+.++..+...+..+..+
T Consensus 239 ~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~- 314 (420)
T PRK09528 239 YDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIMF-FAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG- 314 (420)
T ss_pred HHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc-
Confidence 3444445666654331 11356677888988888888888876 7788889999999888877777766665544321
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhH-HHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMSLFKAAGPAGGGALFSWAQKRLDASFLP 390 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 390 (420)
.+. +.....+.+.......+....+.++..|++.+++..+. .+....+|.+++|.+.|.+.|..
T Consensus 315 ----~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---------- 379 (420)
T PRK09528 315 ----PLE-VSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---------- 379 (420)
T ss_pred ----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 111 22333333444444555666778888999999988776 67778999999999999999988
Q ss_pred CchHHHHHHHHHHHHHHHHHhh
Q 014686 391 GSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 391 g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
||+..|...+++.++..++.+.
T Consensus 380 G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 380 GFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred CchHHHHHHHHHHHHHHHHHHH
Confidence 8999999988888777665554
No 77
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.2e-29 Score=214.73 Aligned_cols=347 Identities=18% Similarity=0.168 Sum_probs=261.4
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
+.+.++++ +|++.+.+.+.+.+.+++.|.+.||+|+|..+++|+..+..+++++++.++++.++++|.+||+|.
T Consensus 100 ~~~~e~~~------iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 100 SLDRENTQ------IGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGS 173 (464)
T ss_pred Cccccccc------hhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhH
Confidence 34445566 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhh-Hhhhhhhchhh-hhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 84 GLLGPI-KAYACEIFREE-HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
+....+ .++++|.+|++ +|++++|+...+.++|..+||+.||.+++ ..+.+.+|++.++..+
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~L 237 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLL 237 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHH
Confidence 999888 99999999965 57999999999999999999999999999 3345566688888777
Q ss_pred HHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHH
Q 014686 162 GVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSL 241 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (420)
.-..+.+++-|+.+..++. ..+....++++++|.++.........+.........++.
T Consensus 238 ld~~L~l~vi~p~~~~~~~----------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlsl 295 (464)
T KOG3764|consen 238 LDGALQLLVIEPTEMDPDS----------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSL 295 (464)
T ss_pred HHHHHHHheeCccccCccc----------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHH
Confidence 7655555544332222111 112245788999999988777777777666777777888
Q ss_pred hhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH--HHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 242 WANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA--RIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
|..+. +.-+.-+.|..+....+...++.. +.+.+.||++..+.+ ..+.+.........++..... ..|..
T Consensus 296 wm~e~-----m~~p~w~~G~~fLp~~~~y~ig~~-lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~--~L~vp 367 (464)
T KOG3764|consen 296 WMLET-----MFTPGWEVGLAFLPASLSYAIGTN-LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA--QLWVP 367 (464)
T ss_pred HHHHh-----ccCCCcceeeeecccccchhccCc-hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH--HHhhh
Confidence 87665 554444788888888888888877 667777887843333 334444444444444444322 23444
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCC--cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVD--QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFF 397 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~ 397 (420)
....++..+.....+.|....++..... -+.-|...++......+|.++||.++|.+++.. |+++...
T Consensus 368 ~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i----------GF~wl~~ 437 (464)
T KOG3764|consen 368 NFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI----------GFEWLMT 437 (464)
T ss_pred hHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh----------hHHHHHH
Confidence 4445555555566666666655544222 126689999999999999999999999999998 8998888
Q ss_pred HHHHHHHHHHHHHhh
Q 014686 398 VLNVVEAIGVLMTFK 412 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (420)
..+...++..-+...
T Consensus 438 iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 438 IIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887776544433
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=1e-27 Score=221.76 Aligned_cols=353 Identities=13% Similarity=0.118 Sum_probs=235.9
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh---hh-----hhHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LS-----VNFWMAV 73 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~~-----~~~~~l~ 73 (420)
.+++|.++.+ .|++.+++.+++.+++++.|+++||+|||+.++.++...+++..... +. +.+..++
T Consensus 30 ~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 30 HDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4568999999 99999999999999999999999999999999887766655443321 12 2234456
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+.|++.|++.+...+. ..+..|.. +++++.++......++|.++||.+++.+.+ .+|| .+
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--------~~~~---------~~ 164 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--------IDPQ---------IV 164 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc--------cCch---------HH
Confidence 7788899888877776 66666643 334567788888889999999999998864 2444 44
Q ss_pred HHHHHHHHHHHHHHHHh-cccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhh
Q 014686 153 CLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~-l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
+...++..++..+..+. .||++++++. ++..+ +++++++.++.++++|||+++...+..++....
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~ 230 (396)
T TIGR00882 165 FWLGSGFALILMLLLMFAKPKAPSSATV-ANALG-------------ANASAFSLKLALELFRQRKFWMFVLYVVGVACV 230 (396)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhh-hcccc-------------cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 45666555554433333 3433221110 00000 000111223457788999887666655554444
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
......+.+.|..+... +.+.+....|...+...+...++.. ..+++.||.++|+.+..+..+..+.........+
T Consensus 231 ~~~~~~~~~~y~~~~~~--~~~~~~~~~g~~~~~~~i~~~~~~~-~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~- 306 (396)
T TIGR00882 231 YDVFDQQFANFFTSFFA--TPQQGTRVFGYVTTMGELLNALIMF-CAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT- 306 (396)
T ss_pred HHHHHHHHHHHHHHhcc--ccccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC-
Confidence 44454566667654421 1355667778888888888888776 6678888889999888887776666555443221
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhH-HHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI-AMTGMSLFKAAGPAGGGALFSWAQKRLDASFLP 390 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~-~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 390 (420)
.+. +.....+.+...............+..|++.++++.+. .+....+|+.++|.+.|.+.|..
T Consensus 307 ----~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~---------- 371 (396)
T TIGR00882 307 ----ALE-VVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI---------- 371 (396)
T ss_pred ----hHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc----------
Confidence 111 22223333333333333444566677788888887776 57788999999999999999998
Q ss_pred CchHHHHHHHHHHHHHHHHHhh
Q 014686 391 GSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 391 g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|++.+|.+.+++.++..+...+
T Consensus 372 G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 372 GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999888877665543
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=4.5e-28 Score=252.43 Aligned_cols=344 Identities=15% Similarity=0.083 Sum_probs=243.7
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hh
Q 014686 16 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 16 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 91 (420)
.+.++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....++++.++++|+++|++.+...|+ .+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 347889999999999999999999999999998633 22233333333334589999999999999999999998 99
Q ss_pred hhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 014686 92 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 171 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (420)
++.|++|+++|++++++.+++.++|.++||++++++.+ ..+|+ ..++...+..+..++..+++|
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-------~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-------SGNFV---------ILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-------ccccH---------HHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999998 44544 333444444444555566777
Q ss_pred cccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCc
Q 014686 172 ETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 251 (420)
Q Consensus 172 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
++++..+..+.+.... + .....++.+.++|.++...+..++..+.......+.|.|..+.
T Consensus 196 ~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----- 255 (1140)
T PRK06814 196 KTGNAAPDLKIDRNII-R--------------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET----- 255 (1140)
T ss_pred CCCCCCCCCeeccchH-H--------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----
Confidence 6654322111110000 0 0012356778899998888887777776667777888888765
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH---------------HhhhhHH
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA---------------MLSGFGL 316 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 316 (420)
+|.++...|.+.+..+++.+++++ ..+++.++..+++.+..+.++..+..+.+.+.. .......
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSF-LASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHH-HHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccccc
Confidence 788999999999999999999988 556666554555544444444333333222210 0000111
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f 396 (420)
+ .+.+..++.+++.....+...+++++..|++.+|+++|+.+++..++..+++.+.|.+.+... ++...+
T Consensus 335 ~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~---------~~~~~~ 404 (1140)
T PRK06814 335 W-RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGF---------SIPWII 404 (1140)
T ss_pred H-HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhcc---------CHHHHH
Confidence 2 233444455566677777888999999999999999999999999999999999999986431 555566
Q ss_pred HHHHHHHHHH
Q 014686 397 FVLNVVEAIG 406 (420)
Q Consensus 397 ~~~~~~~~~~ 406 (420)
++.+.+.++.
T Consensus 405 ~~~~~~~~~~ 414 (1140)
T PRK06814 405 LFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=9.3e-28 Score=251.03 Aligned_cols=351 Identities=17% Similarity=0.094 Sum_probs=243.9
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHhhhhccchhhh-Hh
Q 014686 16 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 16 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 91 (420)
.+.+++.+++.+++.++++++|+++||+|||++++.+.++..+..++.. .+++++.+++.|+++|++.+...+. .+
T Consensus 47 ~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 47 ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh
Confidence 4479999999999999999999999999999999998877666555443 4578999999999999999999888 99
Q ss_pred hhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccc-cCCccccccccccCccchHHHHHHHHHHHHHHHHHHhc
Q 014686 92 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 170 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (420)
++.|++|+++|++++++...+.++|.++||.+++++.+... ..+..++| .++...+......++.++..+.+
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 199 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILG-------RIAPAGLVLLAVAVLGLIFAYRL 199 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc-------chHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999986200 00000111 11122222223333334455667
Q ss_pred ccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCC
Q 014686 171 PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 250 (420)
Q Consensus 171 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (420)
||+++....+.++.... . .+......+.+++++.++...+..++..........++|.|....
T Consensus 200 ~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 262 (1146)
T PRK08633 200 PKVPAAAPEVFDKKKYL--F-----------PKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV---- 262 (1146)
T ss_pred cCCCCCCcccccccccc--c-----------HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH----
Confidence 77765433211010000 0 000112345677888888776666666555555666777777655
Q ss_pred ccCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 251 GLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 251 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+|++.. ..+.+.+..+++.+++++ +.+++.||.++++.+.++.++..++.+.+.+.. ......+..++.++
T Consensus 263 -~g~s~~~~~g~~~~~~~ig~~~g~~-~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 263 -LGLDNTFQVQYLLAASAIGIGIGSL-LAGRLSGRHIELGLVPLGALGLALSLFLLPTAP------SLASVLVLFFLFGF 334 (1146)
T ss_pred -hCCCcHHHHHHHHHHHHHHHHHHHH-HHHHHhCCceEccchhHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHH
Confidence 688888 899999998988888887 777888888887777777666665555544332 12223334444555
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
+.....+...+++.+..|++.||+++|+.+.+.+++..+++.+.+.+.... .++...+.+.+.+.++..
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLG---------LSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhc---------cCHHHHHHHHHHHHHHHH
Confidence 566667778888889999999999999999999999988887776665421 134455555555544443
No 81
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.96 E-value=9.2e-27 Score=218.59 Aligned_cols=375 Identities=12% Similarity=0.046 Sum_probs=242.6
Q ss_pred ccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 5 FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 5 ~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
+|.+..+ .+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|.+.|++.
T Consensus 43 lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~ 116 (475)
T TIGR00924 43 LGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGS 116 (475)
T ss_pred CCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhcc
Confidence 8899999 9999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred cchhhh-Hhhhhhhchhhh---hhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 84 GLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
|...|. .++++|++|+++ |++++++...+.++|.++||++++.+.+ ..||+..| ...++.
T Consensus 117 g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~-------~~g~~~~f---------~~~~~~ 180 (475)
T TIGR00924 117 GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE-------NYGYHVGF---------NLAAVG 180 (475)
T ss_pred ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH-------hcChHHHH---------HHHHHH
Confidence 998887 899999998754 8889999999999999999999999987 45555444 454443
Q ss_pred HHHHHHHHHhcccccCCCCCCC---C-cccchhHhhh-----------h----hhh-hh---------------hhhhcC
Q 014686 160 AFGVTIAAFWLPETLHRHNDDD---D-SCDVSYDALE-----------S----ASA-EV---------------KEEEGR 204 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~---~-~~~~~~~~~~-----------~----~~~-~~---------------~~~~~~ 204 (420)
.++..+.....++..++.+.++ + ++++...... . ... .. .++..+
T Consensus 181 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (475)
T TIGR00924 181 MVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFK 260 (475)
T ss_pred HHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333332221111101 0 0000000000 0 000 00 000000
Q ss_pred CCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHH---HH
Q 014686 205 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP---FL 281 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~ 281 (420)
+.....+..|.+.+....+...++........+.++.+..+....+-.+++ ...+.+.+.+++..++.+.+... .+
T Consensus 261 ~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~-ip~~~~~~~n~~~iil~~p~~~~~~~~l 339 (475)
T TIGR00924 261 PRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMS-VPVIWFQSLNPFWVVVGSPVLAMIWTRL 339 (475)
T ss_pred ccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceE-ECHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 111111112222333334444444444444445555555443211111111 22567777777777777765443 34
Q ss_pred HHh-hchHHHH--HHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHh
Q 014686 282 ERI-LGPIMVA--RIAGVLTIPLLTSYPYIAML---SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAAN 355 (420)
Q Consensus 282 ~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (420)
.|| .+++... ..+.++..++.......... ........+....++.+.+.....|....+..+..|++.||+++
T Consensus 340 ~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~ 419 (475)
T TIGR00924 340 GRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQML 419 (475)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHH
Confidence 443 2223333 55666666665554432110 01123334556667777889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 356 GIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 356 g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|+......+|..+++.+.....+.. ++...|...+.++++..++.+.
T Consensus 420 g~~~l~~~~g~~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 420 GMWFLAQAMGSLLGGYLATFGAVPQ----------GVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc----------chhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988887766544 5777777777777766655544
No 82
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.2e-27 Score=225.71 Aligned_cols=372 Identities=13% Similarity=0.097 Sum_probs=255.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
.+++.+...++..+++++.|+++|++|||+.++.+.+.+.++.+++++++|+++++++|+++|+|.|..... +.+++|.
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi 170 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEI 170 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence 589999999999999999999999999999999999999999999999999999999999999998887776 9999999
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCC
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 176 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~ 176 (420)
.|++.|+...+..+....+|..++..++....+ . .++||.++.+..+++++..+..+++||+|++
T Consensus 171 ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-------~--------~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~ 235 (513)
T KOG0254|consen 171 APAHIRGTLVSLYQLFITIGILLGYCINYGTSK-------V--------YAGWRIPLGLALIPAVILALGMLFLPESPRW 235 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------C--------CccHHHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 999999999999999999999999666555443 1 0246666788888888877778999999988
Q ss_pred CCCCCCcccch--hHhhhh------------hh-hhhhhhhcCCC-CchhhhccchhHHHHHHHHHHHHhhhhhHHHHHH
Q 014686 177 HNDDDDSCDVS--YDALES------------AS-AEVKEEEGREA-TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFS 240 (420)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~------------~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
..++.+.++.. ...+.. .. ....+....+. ....++++++......+...+..+.+........
T Consensus 236 L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~ 315 (513)
T KOG0254|consen 236 LIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVF 315 (513)
T ss_pred HHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEE
Confidence 55433222111 111111 00 00001111111 1244455422333333344443333333322222
Q ss_pred HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh-------
Q 014686 241 LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG------- 313 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 313 (420)
.|..+. .+..|.+... .....+.++...++.. ++..+.||.|||+.+..+...+.++.+++........
T Consensus 316 ~Y~~~i--f~~~g~~~~~-~~~~~~~~~v~~~~t~-~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
T KOG0254|consen 316 YYSTTI--FKSAGLKSDT-FLASIILGVVNFLGTL-VATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSK 391 (513)
T ss_pred eehHHH--HHhcCCCCch-HHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 232222 2223444332 3344444566666655 5577788889999999999988888877665543321
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCch
Q 014686 314 FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQ 393 (420)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~ 393 (420)
...+..+....+....+..+..|..+.+.+|.+|.+.|+++.++...++++...+-....-.+.+.. +..
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~----------~~~ 461 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL----------GIG 461 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccc
Confidence 2234445555555666777888888899999999999999999999999888877665555554443 224
Q ss_pred HHHHHHHHHHHHHHH-HHhhhhhhccC
Q 014686 394 MVFFVLNVVEAIGVL-MTFKPFLAQRH 419 (420)
Q Consensus 394 ~~f~~~~~~~~~~~~-~~~~~~~~~~~ 419 (420)
..|..++.++.+... +.+. ..||++
T Consensus 462 ~~f~~f~~~~~~~~~~fv~~-~~pETk 487 (513)
T KOG0254|consen 462 GTFGYFGGICLLSLIIFVFF-FVPETK 487 (513)
T ss_pred chHHHHHHHHHHHHHHHheE-EcccCC
Confidence 566666666666666 5555 678765
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=4.1e-27 Score=214.70 Aligned_cols=321 Identities=11% Similarity=0.160 Sum_probs=225.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-----CCchh-HHHHHHHHHHHHHHHhhh---hhHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLFGLS---VNFWMA 72 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grk~~-l~~~~~~~~~~~~~~~~~---~~~~~l 72 (420)
.+|+|+|.+| .|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++. .+.+.+
T Consensus 15 ~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 15 LRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred HHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 4788999999 9999755 555555 99999999998 89887 467777777777777776 466677
Q ss_pred HHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchH
Q 014686 73 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 151 (420)
Q Consensus 73 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 151 (420)
....++.+.+.+...+. .+++.|++|+|+|+++.++...+.++|.++++.+++.+.+ ..|.+. +.+++||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g~~~-~~~~~wr~ 158 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEFANT-GLITLWGY 158 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hccccc-ccccccHH
Confidence 77788888888877777 9999999999999999999999999999999999999887 444222 12556777
Q ss_pred HHHHHHHHHHHHHHHHH-hcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchh---HHHHHHHHHH
Q 014686 152 PCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP---LMSSIIVYCV 227 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 227 (420)
++.+.++..++..+..+ ..||+++.++. ++++. ++.....++++|+|. ++...+..++
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~~~~~~~---~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEPQEDASV---PKPLT---------------QAVLKPIREFFQRKNMIQALLLLLLIVL 220 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccccc---chhHH---------------HHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 77877776666555444 34664321111 00000 000113455666664 5555555555
Q ss_pred HHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014686 228 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 306 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
..........+.+.|..+ .|+++.+.+......+. ..+++.+ +++++.||+++|+.+..+.++..+....+.
T Consensus 221 ~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~~-~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~ 293 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGGL-IGGIIMQPLNILYALLLFGIVQALTNAGFV 293 (356)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 555555666677777643 58899999988887774 4555554 788899999998888887777666655444
Q ss_pred HHHHhhh-----hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHH
Q 014686 307 YIAMLSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 363 (420)
Q Consensus 307 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 363 (420)
+...... ......+....++.++......+...++.+|.+|+++||+.+|+.+...+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 294 WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4321110 01112233344455666778889999999999999999999999887654
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=3.6e-26 Score=214.58 Aligned_cols=383 Identities=13% Similarity=0.032 Sum_probs=233.3
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVNFWM-AVLTRFLL 79 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~ 79 (420)
++++|.++++ .+++.+.+.....+..++.|+++|| +||||+++.+.+++.++.+.++++++... ++++|.++
T Consensus 42 ~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 42 VKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 4678999888 9999999998888899999999999 99999999999999999999999876554 55889999
Q ss_pred hhhccchhhh-Hhhhhhhchhh--hhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
|++.|...|. .+++.|.+|++ +|.+++++++.+.++|..+||.+++++.+ .+|||+.| .+.
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~-------~~gw~~~F---------~i~ 179 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD-------KFGYSVTY---------NLC 179 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH-------hhChHHHH---------HHH
Confidence 9999999887 99999999876 45789999999999999999999999998 56666555 444
Q ss_pred HHHHHHHHHHHHhcccccCCCCCC--C---Ccccchh------------Hhhhhhhhhhh--------------hhhcCC
Q 014686 157 SLFAFGVTIAAFWLPETLHRHNDD--D---DSCDVSY------------DALESASAEVK--------------EEEGRE 205 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~~~~~~~~--~---~~~~~~~------------~~~~~~~~~~~--------------~~~~~~ 205 (420)
++..+..++.....++..++.+.+ + |...... ....+...... -.++.+
T Consensus 180 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~ 259 (489)
T PRK10207 180 GAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK 259 (489)
T ss_pred HHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 332232233333333322211101 0 1001000 00000000000 000000
Q ss_pred CCchhhhccchhHHHHHHH--HHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014686 206 ATPKKSLLKNWPLMSSIIV--YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 283 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 283 (420)
..+.+|+|.+....+. ..++..........++.|.++.......|+... ...+.+.+.+..++.+.+ .+++.+
T Consensus 260 ---~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~-~~~~~~~n~~~iii~~pl-~~~l~~ 334 (489)
T PRK10207 260 ---LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSIN-PVSFQALNPFWVVVASPI-LAGIYT 334 (489)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEEC-HHHHHhHhHHHHHHHHHH-HHHHHH
Confidence 1145566665443322 222223333333455566653222222233321 223333444445455553 345666
Q ss_pred hhchHH-------HHHHHHHHHHHHHHHHHH----HHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhh
Q 014686 284 ILGPIM-------VARIAGVLTIPLLTSYPY----IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRG 352 (420)
Q Consensus 284 ~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 352 (420)
|.++|+ .+..+.++..++.+.... ............+....++.+.+.....|.....+.+..|++.+|
T Consensus 335 rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g 414 (489)
T PRK10207 335 HLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMG 414 (489)
T ss_pred HHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHH
Confidence 666664 355666666555543221 111111112223445566677888889999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 353 AANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 353 ~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
.++|+.+...++|+.++..+.+.........+.......+...|...+...+++.++.+
T Consensus 415 ~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 415 FILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877765432111000000011356677777766665544443
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=4.7e-26 Score=213.77 Aligned_cols=335 Identities=16% Similarity=0.106 Sum_probs=230.4
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh----cCCch-hHHHHHHHHHHHHHHHhhhhh------HH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTLFGLSVN------FW 70 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grk~-~l~~~~~~~~~~~~~~~~~~~------~~ 70 (420)
.+++|+++.+ .|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++ ..
T Consensus 27 ~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 27 TDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 4678999999 9999999999999999999999997 67744 567788888888887776653 45
Q ss_pred HHHHHHHHhhhhccchhhh-Hhhhhhhc-hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCcc
Q 014686 71 MAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 148 (420)
Q Consensus 71 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~ 148 (420)
.+++.+++.+++.+...+. .++..|.. ++++|++..++.+.+..+|..+++.+.+.+... .+.. ....+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~-------~~~~--~~~~g 171 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSY-------FGGG--DDKFG 171 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCC--ccccc
Confidence 6777888888887776555 88888887 478999999999999999988888777666541 1100 00335
Q ss_pred chHHHHHHHHHHHHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHH
Q 014686 149 YFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 227 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
|+..+.+.++..++.. +..+..||++++.+.++++ +.+..+..+++++||+++...+..++
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK------------------KLSLKQIFKALFKNDQLLILCLAYLF 233 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc------------------CCCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6666566666665543 3445667654221110000 00111235677899998887777666
Q ss_pred HHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014686 228 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
............+.|.... .+ ++...+.+.....+..+++.+ +.+++.||+++|+....+..+..++.+...+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 234 YNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGVL-LFPRLVKKFGRKILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred HHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 6555444443444343322 33 455666666776777777766 6788889999999988887777766655543
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 308 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
.. . . .....+...+.+++.....+..+++.+|..| ++.+|++.|+.+....+|..+++.+.|.+.+..
T Consensus 307 ~~--~--~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 307 AG--S--N-LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred cc--h--h-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22 1 1 1122233334445555667777788877654 567899999999999999999999999999876
Q ss_pred h
Q 014686 381 Q 381 (420)
Q Consensus 381 ~ 381 (420)
+
T Consensus 382 G 382 (437)
T TIGR00792 382 G 382 (437)
T ss_pred C
Confidence 4
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.95 E-value=1.3e-24 Score=200.62 Aligned_cols=349 Identities=13% Similarity=0.035 Sum_probs=230.5
Q ss_pred ccccccccccchhhhhHHH--HHHHHHHHHHhhhhhhh-hhhhcCCchhHHHHHHHH-HHHHHHHh---hhhh-HHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGTASV-VIFNTLFG---LSVN-FWMAVL 74 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grk~~l~~~~~~~-~~~~~~~~---~~~~-~~~l~~ 74 (420)
+|.|.|.++ +|++ .+...+...+.+|+++. ..||+||||..++.+.+. .+.....+ ...+ ...++.
T Consensus 29 ~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (390)
T TIGR02718 29 REDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVG 102 (390)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHH
Confidence 677899999 9997 46778888889999855 799999999875554332 22222222 2222 333444
Q ss_pred HHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHH
Q 014686 75 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC 153 (420)
Q Consensus 75 ~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~ 153 (420)
.-++.++..+...+. .++..|..++++++...+....+..+|.++|+...+++.+ .+|||. ++
T Consensus 103 ~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~-------~~gw~~---------~f 166 (390)
T TIGR02718 103 LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG-------KFGQRP---------AF 166 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCHHH---------HH
Confidence 445555666666666 7888888888888888888888889999999999889988 455554 44
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhh
Q 014686 154 LCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
.+.++..++..+..++++|+++++++++ + ++..+.++.+|+|.++......++......
T Consensus 167 ~~~a~l~~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 225 (390)
T TIGR02718 167 LLVACVPLASLVCVLWLKDRAVASPEAP---L------------------ARRASLFRFFRRPLAWSLLALALLSAMTAV 225 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCccccc---h------------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 6666665554444445544332111000 0 011235678888888877777777666666
Q ss_pred hHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 014686 234 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG 313 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (420)
....+.+.|..+ .|++++++|......+....+.+.+..+++.||+++++.+..+...................
T Consensus 226 ~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 299 (390)
T TIGR02718 226 SGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL 299 (390)
T ss_pred HHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 666666666643 58999999999888776555544448889999999999888776655332222211111000
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCc-chhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCc
Q 014686 314 FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQ-DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGS 392 (420)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~ 392 (420)
............+.++......+.......+..++ +.+++.+++.+...++|..++|.+.|.++|.. |+
T Consensus 300 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~----------G~ 369 (390)
T TIGR02718 300 APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF----------GY 369 (390)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cc
Confidence 00111111222222233344455666666566665 89999999999999999999999999999998 88
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 014686 393 QMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 393 ~~~f~~~~~~~~~~~~~~ 410 (420)
+..|.+.+++.+++.++.
T Consensus 370 ~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 370 AGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 889998888777765543
No 87
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=7.3e-25 Score=209.72 Aligned_cols=358 Identities=15% Similarity=0.146 Sum_probs=238.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
..+..+++.+|..+|++++|+++||+|||++++.++++..++.+..++++|++.+++.|+++|++.+....+ ..++.|+
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~ 199 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEI 199 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheee
Confidence 889999999999999999999999999999999999999999999999999999999999999998777776 9999999
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCC
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 176 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~ 176 (420)
+++|+|+.+..+ ......+..++++.++++.. + ||...+...++....++.++..||+|++
T Consensus 200 ~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---------~---------Wr~~~~~~~~~~~~~~~~~~l~~Es~rw 260 (521)
T KOG0255|consen 200 VSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---------D---------WRWLFWIISIPSGLFLLLWFLPPESPRW 260 (521)
T ss_pred cCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---------h---------HHHHHHHHHHHHHHHHHHHHccCcChHH
Confidence 999999999999 77778888888888888864 3 4555577777777766666677799998
Q ss_pred CCCCCCcccch--hHhhhhh------h-----h--hhhh---hhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHH
Q 014686 177 HNDDDDSCDVS--YDALESA------S-----A--EVKE---EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEI 238 (420)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~~------~-----~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (420)
...+.+.++.. .++..+. . . ..++ ...+++....++++.|++....+...+..+.....
T Consensus 261 l~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~--- 337 (521)
T KOG0255|consen 261 LLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLV--- 337 (521)
T ss_pred HHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHH---
Confidence 65544432221 1111110 0 0 0000 01112244677888876544444333332211111
Q ss_pred HHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 239 FSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
|........++|.+.. ......+........ ......++.|||.....+..+..++++...+....... +.
T Consensus 338 ---y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~-~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 408 (521)
T KOG0255|consen 338 ---YYGLSLNVSGLGGNIY---LNFTLSGLVELPAYF-RNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGG--WL 408 (521)
T ss_pred ---HHhhhhhhhhcCchHH---HHHHHHHHHHhhHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchh--HH
Confidence 1111111122333322 223333345555544 45566677799999999999988888888776643321 11
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
..+...+..++............+|.+|+..|..+.+..+....++++++|.+.-...... ....+.+
T Consensus 409 -~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~-----------~~~~~~~ 476 (521)
T KOG0255|consen 409 -HWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMF-----------PLLGLIL 476 (521)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----------ccchHHH
Confidence 1122222223334445555889999999999999999999999999999999876554432 1222233
Q ss_pred HHHHHHHHHHHHhhhhhhccC
Q 014686 399 LNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~ 419 (420)
++....+...+... ..||.+
T Consensus 477 ~~~~~~l~~~~~~~-~lpet~ 496 (521)
T KOG0255|consen 477 FGWLALLLGLLSLL-LLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHh-cCcccC
Confidence 45555555544434 466543
No 88
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=8.9e-33 Score=260.19 Aligned_cols=376 Identities=19% Similarity=0.248 Sum_probs=251.2
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHhhhhccchhhh-Hh
Q 014686 16 SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 16 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~-~~ 91 (420)
...+++.+...+|..+|+++.|.++||+|||+.+..+.++..++.++.++++ |++.++++|+++|++.|...+. ..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3478999999999999999999999999999999999999999999999999 9999999999999999988887 99
Q ss_pred hhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcc
Q 014686 92 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 171 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (420)
++.|..|+++|++..++.+....+|..++..++..+.+ ..+ .+.||..+....++.+...+...++|
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-------~~~------~~~Wr~~~~~~~~~~l~~~~~~~~~p 192 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-------YSD------NWGWRILLIFGAIPSLLVLLLRFFLP 192 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc-------ccc------cccccccccccccccccccccccccc
Confidence 99999999999999999999999999998888765543 111 12344444677777776667778999
Q ss_pred cccCCCCCCCCcccc--hhHhhhhhhh---hhhhhh------cCCCCchhhhccchhH-HHHHHHHHHHHhhhhhHHHHH
Q 014686 172 ETLHRHNDDDDSCDV--SYDALESASA---EVKEEE------GREATPKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 172 e~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (420)
|||++...++++++. ..++.++.+. +.+++. ++.+..+++++++++. +.......+............
T Consensus 193 ESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 272 (451)
T PF00083_consen 193 ESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFI 272 (451)
T ss_pred cccceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccc
Confidence 999986544433322 1122111111 101101 1111346677777542 222222222222211111122
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH--HHHHhhhh--H
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP--YIAMLSGF--G 315 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~ 315 (420)
..|. +...+..+.+.. -......++...++.+ .+..+.||+|||+.+..+.....++..... ........ .
T Consensus 273 ~~~~--~~i~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 273 FYYS--PSIFENAGISNS--FLATLILGLVNFLGTL-LAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred cccc--cccccccccccc--cccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccc
Confidence 2222 222233455555 1111222344444444 556888899999998888877776655553 11111110 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHH
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMV 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~ 395 (420)
....+.........+..+..+..+.+.+|.+|++.|+++.|+....+.+++.++|.+...+.+.. +....
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----------~~~~~ 417 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----------GGWGV 417 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------ccccc
Confidence 12122222222233445667788889999999999999999999999999999999988888776 43456
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCC
Q 014686 396 FFVLNVVEAIGVLMTFKPFLAQRHD 420 (420)
Q Consensus 396 f~~~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
+.+.+.++++..++.+. +.||+++
T Consensus 418 ~~i~~~~~~i~~i~~~~-~lpET~g 441 (451)
T PF00083_consen 418 FLIFAGVCLIAIIFVYF-FLPETKG 441 (451)
T ss_pred chhhHHHHHHHHhheeE-EEeeCCC
Confidence 67777777777777777 7888764
No 89
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=2.1e-26 Score=195.10 Aligned_cols=367 Identities=15% Similarity=0.105 Sum_probs=248.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+.+|.+..| ..++....+.+..+++..||..+|++|||+.+.+......+...+.+.++|+..+++.|.+.|+|
T Consensus 106 ~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g 179 (528)
T KOG0253|consen 106 EVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFG 179 (528)
T ss_pred hhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhcc
Confidence 456777777 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
.|. .|. .++-.|..|..+|..-+-.. ..+.+|.+....++-.... .+|||+.+ .....+..
T Consensus 180 ~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~-------~~gwr~~l---------~~~~~pl~ 241 (528)
T KOG0253|consen 180 VGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS-------NFGWRYLL---------FTSSTPLM 241 (528)
T ss_pred CCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH-------hhhHHHHH---------HHHHhHHH
Confidence 888 666 88889999999998776666 9999999999999988887 67777655 55556666
Q ss_pred HHHHHHHhcccccCCCCCCCCcccchh--Hhhhhhh---------------hhhhh----------hhcCCCCchhhhcc
Q 014686 162 GVTIAAFWLPETLHRHNDDDDSCDVSY--DALESAS---------------AEVKE----------EEGREATPKKSLLK 214 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~~~~~~~~~~~~~--~~~~~~~---------------~~~~~----------~~~~~~~~~~~~~~ 214 (420)
+.....+++||+|+..-.+.++.+... +++.+.+ ++++| ..++......+++.
T Consensus 242 ~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLls 321 (528)
T KOG0253|consen 242 FAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLS 321 (528)
T ss_pred HHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcC
Confidence 677788999999998655544433321 1111110 00000 00112223344444
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHH---HHhhcCcc----------cCC----ccCCchhhHHHHHHHHHHHHHHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIF---SLWANSPK----------KLG----GLNYSTQMVGEVLAITGFSLLVFQLSL 277 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~ 277 (420)
.+-.+..++....+......+.... ..+.+... .+. +-..+...--.-..+..+...++.+ +
T Consensus 322 p~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlL-I 400 (528)
T KOG0253|consen 322 PKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLL-I 400 (528)
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchh-H
Confidence 3333333333333322222222111 11111110 000 0011111111223344677778866 8
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhH
Q 014686 278 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI 357 (420)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 357 (420)
..++.||+|||+.+....++..+..+....... .+......+. .-++..+.+...+.+..|.+|+..|+++.|.
T Consensus 401 t~~iverlGRKkTMal~l~~f~iflfll~~c~~--rn~~tvllf~----arafisg~fqvaYvYtPEVyPTavRatgvGt 474 (528)
T KOG0253|consen 401 TGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--RNAYTVLLFT----ARAFISGAFQVAYVYTPEVYPTAVRATGVGT 474 (528)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--cchhHHHHHH----HHHHHhchheEEEEecCcccchhhhhcchhh
Confidence 888888899999999998888777666554432 2222222222 2245566778889999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 358 AMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 358 ~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
++.+..+|+++.|.++ ...+. ....+..+.+.+++++.+..++
T Consensus 475 cSsmaRIggI~~p~iA-~~~e~-----------s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 475 CSSMARIGGIFSPVIA-MRAEL-----------STSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred hhhHHhhhhhhhhHHH-HHhcc-----------ceeehHHHHHHHHHHHHHHhee
Confidence 9999999999999988 33332 3445566677777777766655
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=4.5e-27 Score=226.58 Aligned_cols=289 Identities=17% Similarity=0.183 Sum_probs=212.7
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-------------
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV------------- 67 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~------------- 67 (420)
++++|+++..+ .|++.+.+.+++.++.++.++++||+|||+.+.++.++++++++++++.+
T Consensus 59 iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 59 IERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 46889999999 99999999999999999999999999999999999999999999998763
Q ss_pred --------------------------------------hHHHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHH
Q 014686 68 --------------------------------------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLST 108 (420)
Q Consensus 68 --------------------------------------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~ 108 (420)
.+..++++|+++|+|.+...+. .+++.|++|+++|++++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 2556789999999999999887 9999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHhHhccccccCCcc---------ccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 014686 109 VSTAWGIGLIIGPALGGFLAQPAEKYPNL---------FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 179 (420)
Q Consensus 109 ~~~~~~~g~~~g~~l~~~l~~~~~~~~~~---------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~ 179 (420)
...+..+|.++|+++++++.+...+|+.. .+|| | ...||..+++.+++.++..+.++++|++.++..+
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dpr--W-iGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~ 289 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPR--W-IGAWWIGFLICGGVALLTSIPFFFFPKALPKEGK 289 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCcc--H-HHHHHHHHHHHHHHHHHHHHHHHhCccccCCccc
Confidence 99999999999999999998732222110 0111 1 2247888888887777765556677766443211
Q ss_pred CCCcccchhHhhhhhhhhh-h---hhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCc
Q 014686 180 DDDSCDVSYDALESASAEV-K---EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 255 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (420)
+.+.+....+..++..++. . +..++.....++++|||.++...+..++.......+..+.|.|+... +|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~-----~g~s 364 (633)
T TIGR00805 290 RVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQ-----YGIS 364 (633)
T ss_pred ccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCc
Confidence 1100000000000000000 0 00011123466799999999999998888888888889999999776 8999
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHH
Q 014686 256 TQMVGEVLAITGFS-LLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 304 (420)
Q Consensus 256 ~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 304 (420)
+.+++.+.....+. .+++.+ +++++.||++ .++.+..+..+..+..+.
T Consensus 365 ~~~ag~l~~~~~i~~~~vG~~-l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 365 SAEANFLIGVVNLPAAGLGYL-IGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHhhhhhhhHHHHHHh-hhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 99999998877764 445544 7888888876 466666666666555433
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=8.9e-25 Score=188.92 Aligned_cols=353 Identities=18% Similarity=0.218 Sum_probs=264.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---LSVNFWMAVLTRFL 78 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l 78 (420)
++.|+++..| .+++..+++.++.+.+++.|++.+|+|+|+.++.++.++++++.++. -..++..++++-++
T Consensus 40 ~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi 113 (422)
T COG0738 40 KEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI 113 (422)
T ss_pred HHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 5678999999 99999999999999999999999999999999999999999999985 45788999999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccccc----CCccccccccccCccchHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK----YPNLFSSESLFGKFPYFLPC 153 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~----~~~~~gw~~~~~~~~~~~~~ 153 (420)
.|.|.+...+. ..+++...|+++-.+.+.+.+..+++|.+++|++++.+..+... -+....|+... -..++.++
T Consensus 114 la~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~-~~~v~~pY 192 (422)
T COG0738 114 LASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGAD-ASSVQFPY 192 (422)
T ss_pred HHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHH-HHhhhhHH
Confidence 99999998887 99999999999999999999999999999999999999873100 00011122111 12245555
Q ss_pred HHHHHHHHHHHHHHHh--cccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhh
Q 014686 154 LCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH 231 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~--l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
...+...++..+.... .||.++..+++. +.......+++|+|.++...+..+++...
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~---------------------~~~~~~~~~l~~~~~~~~gvl~~FlYVG~ 251 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPSLG---------------------ASGSAGLSSLFQNKHLRLGVLAIFLYVGA 251 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCccccccc---------------------ccccchHHHHHhChHHHHHHHHHHHHHhH
Confidence 5555444443333222 232222111111 01111567899999999999999999999
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
.....++++.|+.++ .|.+..+.+...+....+.++++. ++.++.+|++..+.+....+...+.++...+..+
T Consensus 252 Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGRF-ig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g- 324 (422)
T COG0738 252 EVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGRF-IGSALMSRIKPEKYLAFYALIAILLLLAVALIGG- 324 (422)
T ss_pred HHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 999999999999876 689999999999999999999987 5566666888888888777666665555555432
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
.+.+....+.+.+...++|...++..+..| ++...+.+ .-.+..+|+++-|.+.|++.|.. |
T Consensus 325 ------~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~-~l~maivGGAiiP~l~G~i~d~~----------g 386 (422)
T COG0738 325 ------VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG-LLVMAIVGGAIIPPLQGVIADMF----------G 386 (422)
T ss_pred ------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce-eeeeheecchHHHHHHHHHHHhh----------h
Confidence 122233444556788999999999999898 44444444 34577899999999999999998 5
Q ss_pred chHHHHHHHHHHHHHH
Q 014686 392 SQMVFFVLNVVEAIGV 407 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~ 407 (420)
....+.....+|.+..
T Consensus 387 ~~~~~~~~pllc~lyV 402 (422)
T COG0738 387 IQLTFLIVPLLCYLYV 402 (422)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5556554555554444
No 92
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=3.6e-25 Score=206.12 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=267.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLT-RFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G 80 (420)
+++++.+.++ ++|+.++......+..|+.+.+.||||.|.+.+.+.++..++.++.++++++|++++. -++.|
T Consensus 73 ~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G 146 (509)
T KOG2504|consen 73 MDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGG 146 (509)
T ss_pred HHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 5788889999 9999999999999999999999999999999999999999999999999999988877 67889
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
+|.|..... ...+..++ +|+|+.+.|+...+.++|.++-|.+...+.+ .+|||... +..+.+
T Consensus 147 ~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~-------~~G~r~~~---------l~~~~~ 209 (509)
T KOG2504|consen 147 LGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS-------KYGWRGAL---------LIFGGI 209 (509)
T ss_pred ccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHH-------HhCcHHHH---------HHHHHH
Confidence 998886654 77777665 5679999999999999999999999999998 66666544 444444
Q ss_pred HHHHHHH-HHhcccccCCCCC---------------------CC-CcccchhH--hhhhhh-hhhhhhh---cCCCCc--
Q 014686 160 AFGVTIA-AFWLPETLHRHND---------------------DD-DSCDVSYD--ALESAS-AEVKEEE---GREATP-- 208 (420)
Q Consensus 160 ~~~~~~~-~~~l~e~~~~~~~---------------------~~-~~~~~~~~--~~~~~~-~~~~~~~---~~~~~~-- 208 (420)
.+-.... ...-|.+++..+. +. ++.....+ ...... ++.+++. ......
T Consensus 210 ~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (509)
T KOG2504|consen 210 SLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSM 289 (509)
T ss_pred HHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhh
Confidence 4443333 3333422221111 00 00000000 000000 0000000 111111
Q ss_pred -hhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 014686 209 -KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG- 286 (420)
Q Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (420)
..+++|+|.++...+...+..........+++.|..+ .+++..+++.+.++.++..+++++ +.+++.|+..
T Consensus 290 ~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~~~~~aa~l~Siigi~~i~gRi-~~G~laD~~~~ 362 (509)
T KOG2504|consen 290 LDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGLSSNDAAFLLSIIGVSDIIGRI-ILGLLADKPGI 362 (509)
T ss_pred hhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCChhhhHHHHHHHHHhhhhhhh-hhhhhcCcccc
Confidence 3688999999988888888777777777777777653 799999999999999999999998 7788888755
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHH
Q 014686 287 -PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLF 365 (420)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (420)
++....++.+...+.....+.... ...+...+.+.++..+........++.+..+.++-..+.|+...++.++
T Consensus 363 ~~~~~~~~~ll~~gl~~~~~p~~~~------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~ 436 (509)
T KOG2504|consen 363 RALVLFLLTLLIAGLARLFLPFATT------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIG 436 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHH
Confidence 334444444444444434433322 2344555666666667777777788999999999999999999999999
Q ss_pred HHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 366 KAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 366 ~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
..+||++.|.++|..+ +|...|+.++...+++..+.+.
T Consensus 437 ~l~gpPiag~~~d~tg---------~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 437 ALVGPPIAGLLYDITG---------NYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HHcCcccceeeeeccC---------CeeeehhhcChHHHHHHHHHHH
Confidence 9999999999999984 5888999999888888765544
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=7.2e-24 Score=180.55 Aligned_cols=343 Identities=16% Similarity=0.096 Sum_probs=270.5
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
|++|+|+|.++ .|+++++..+...+.+++..+++.|+|.++.+..++++..++.++-... +.+.++.+-.+.|
T Consensus 38 Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G 110 (395)
T COG2807 38 IRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAG 110 (395)
T ss_pred HHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHH
Confidence 46889999999 9999999999999999999999999999999999999999999998887 7888889999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
.+.+..... ++.+.+.+|+ +-+..++++....++|..+++.+.-.+.++ ..|||.. ...-+++
T Consensus 111 ~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~------~~gW~~a---------L~~WAl~ 174 (395)
T COG2807 111 AGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQH------SGGWRGA---------LGFWALL 174 (395)
T ss_pred hhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHh------hccHHHH---------HHHHHHH
Confidence 999998887 9999999985 579999999999999999999999999882 1245533 3455556
Q ss_pred HHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 160 AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
+++.++.+ +|...+++..+ .+.+..+...++|||.-|...+.+.+.++.......++
T Consensus 175 allAl~~W--lPq~~r~~~~~---------------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WL 231 (395)
T COG2807 175 ALLALLIW--LPQALREQAAS---------------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWL 231 (395)
T ss_pred HHHHHHHH--hhhcccccccc---------------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHH
Confidence 66555544 45432221110 11112334568999999999999999999999999999
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAF 318 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (420)
|.++.+ .|+|+.++|.+.+...+..++.++ ..+.+.+| .++|+.......++.++...+.+.+.. ..+.
T Consensus 232 P~ili~------~G~sa~~aG~llsl~~l~~~~~~l-l~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~---~~~l 301 (395)
T COG2807 232 PAILID------RGLSAAEAGSLLSLMQLAQLPTAL-LIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ---LPIL 301 (395)
T ss_pred HHHHHH------cCCCHHHhhhHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh---HHHH
Confidence 998876 599999999999999999999998 67777665 456666667777777777666554421 1122
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhc-CCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHH
Q 014686 319 LLNCASVVKNLLSVSIITGLFILQNRA-VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFF 397 (420)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~ 397 (420)
. .++.+.+..+.+|....+.... .++++.++-.|+.+.++++-.+.||.+.|.+.|..+ +|+.++.
T Consensus 302 w----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g---------sw~~~~~ 368 (395)
T COG2807 302 W----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG---------SWSAPLV 368 (395)
T ss_pred H----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC---------ChHHHHH
Confidence 2 2344456567777777666654 457888999999999999999999999999999995 8998888
Q ss_pred HHHHHHHHHHHHHhh
Q 014686 398 VLNVVEAIGVLMTFK 412 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (420)
......++..+.-+.
T Consensus 369 ~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 369 LLALATLLMLIFGLR 383 (395)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888877777666554
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=1e-23 Score=191.87 Aligned_cols=367 Identities=17% Similarity=0.204 Sum_probs=260.1
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcC-CchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++.|.|.+| +|.+.+...+...++++++|.++||.+ +||.+.+..++.++........++++.+++.-++..+
T Consensus 30 ~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~ 103 (400)
T PF03825_consen 30 ESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSF 103 (400)
T ss_pred HhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 456889999 999999999999999999999999986 6888888888888877777788899988888888888
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHH-hHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG-GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~-~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
......|. .++..+... ++++-.|-.....++|.+++.... +.+.. ..+++. ....+.+.+..
T Consensus 104 ~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~-------~~~~~~------~~~~~~i~~~~ 168 (400)
T PF03825_consen 104 FFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGG-------YLGISG------TSLIFYIAAIL 168 (400)
T ss_pred HHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHh-------hhcccc------ccHHHHHHHHH
Confidence 77777776 666666654 456667888888888988886542 33332 111111 11122333333
Q ss_pred HHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHH
Q 014686 160 AFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIF 239 (420)
Q Consensus 160 ~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (420)
.++.....+.+|+.|++++.+++.+ +....+..+++|||++....+..++.......+.++.
T Consensus 169 ~~ll~~~~l~lp~~~~~~~~~~~~~------------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~ 230 (400)
T PF03825_consen 169 SLLLAGFALFLPKTPPKRSAKESVK------------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF 230 (400)
T ss_pred HHHHHHHHHhCCCCccccccCCCcc------------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444566787763332221111 1112234579999999988888888888888888888
Q ss_pred HHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 014686 240 SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
+.|+.+. -|.+....+...+...+.+++.-. ..+++-+|+|.++++.++....++=..++.....+. ......
T Consensus 231 ~~yl~~~-----gg~~~~~~g~~~~l~~~aEi~~f~-~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~-~~~~~~ 303 (400)
T PF03825_consen 231 SIYLQEL-----GGYSGSTIGILWALGVVAEIPFFF-FSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPW-PFIVAL 303 (400)
T ss_pred HHHHHHc-----ccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCc-HHHHHH
Confidence 8888764 237778888888887777777744 778888889999999999998888877776652211 111112
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHH-HHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHH
Q 014686 320 LNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTG-MSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFV 398 (420)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~ 398 (420)
......+-+............++.+..|++.|++++++.+.. ..+|..+|..++|+++|+.+.+.. ..+...+.+
T Consensus 304 ~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~----~~~~~~~~v 379 (400)
T PF03825_consen 304 QLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM----FDWSAVFLV 379 (400)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh----hhHHHHHHH
Confidence 222234456666778888889999999999999999998876 489999999999999999743211 135566777
Q ss_pred HHHHHHHHHHHHhhhhhhccCC
Q 014686 399 LNVVEAIGVLMTFKPFLAQRHD 420 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
.+++.++..++.+. ..||+++
T Consensus 380 ~a~~~~~~~~~f~~-~fk~~~~ 400 (400)
T PF03825_consen 380 FAVMALVILVLFVI-LFKPKHN 400 (400)
T ss_pred HHHHHHHHHHHHHh-hccCCCC
Confidence 77777777666666 4555543
No 95
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=6.1e-27 Score=204.35 Aligned_cols=383 Identities=16% Similarity=0.138 Sum_probs=247.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHHhhhhccchhhh-
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI- 89 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~- 89 (420)
.+.+..+..+|.++|+++.|+++||+|||+++...++++.+++++++++. -..++...|++.|+|.|.-+|+
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 78899999999999999999999999999999999999999999888752 2578889999999999999998
Q ss_pred HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcccccc---ccccCccchHHHHHHHHHHHHHHHH
Q 014686 90 KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE---SLFGKFPYFLPCLCISLFAFGVTIA 166 (420)
Q Consensus 90 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~---~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (420)
.+..+|...+++||...+.+.+..+.|...|.+++-.+..-... .++-+ ... +.-||+.+.+..++++..+..
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~---~~~~~~~~~~l-d~vWRl~~glg~vpa~~~ly~ 241 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEK---IFNGPSTYPHL-DGVWRIIFGLGAVPALLVLYF 241 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhc---cCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 78889999999999999998888888888887777665532111 12211 111 345888889999999988888
Q ss_pred HHhcccccCCCCCCCCcccchhHhhhhhhh------hhhhhhcCCCC----chhhhccch---hHHHHHHHHHHHHhhhh
Q 014686 167 AFWLPETLHRHNDDDDSCDVSYDALESASA------EVKEEEGREAT----PKKSLLKNW---PLMSSIIVYCVFSLHDM 233 (420)
Q Consensus 167 ~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~ 233 (420)
++.+||+++.+...+++.+...++.++... +..+...+.++ .+...+..+ .+......+++......
T Consensus 242 Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy 321 (538)
T KOG0252|consen 242 RLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFY 321 (538)
T ss_pred hhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999998762222111111011110000 00001111111 122222222 22333444444443333
Q ss_pred hHHHHHHHhhcCcccCCccCCchhhHH--------HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014686 234 AYSEIFSLWANSPKKLGGLNYSTQMVG--------EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 305 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
.........+ +..++.+.... ....+....+.+-...+...+.|++||++....++.++.+..+..
T Consensus 322 ~~nL~~s~I~------~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 322 GQNLFQSVIF------SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred ccccHHHHHH------HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHH
Confidence 3322222222 11233332222 222222222222112244567788899999999999888877766
Q ss_pred HHHHH-hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhcc
Q 014686 306 PYIAM-LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL 384 (420)
Q Consensus 306 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~ 384 (420)
....+ ........+ ...+...+...+-+.....+.+|.+|.+.|++..|+....+..|++++.....++.+..
T Consensus 396 ~~~y~~~~~~~Gf~v--~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~---- 469 (538)
T KOG0252|consen 396 AGPYNQLENTIGFVV--LYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN---- 469 (538)
T ss_pred cCCcccccccCceee--hHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc----
Confidence 55433 121122222 22222233444555566678899999999999999999999999999999998888743
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 385 DASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 385 ~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.++..+.+.++++++.+++++.++.++ .||++
T Consensus 470 -yp~~~g~~~v~~i~~~~~~~gi~~T~l--~pEtk 501 (538)
T KOG0252|consen 470 -YPPNIGVRNVFIILAGCMLLGILFTLL--IPETK 501 (538)
T ss_pred -CCccccchHHHHHHHHHHHHhHheeEE--eeccc
Confidence 111228899999999999999888776 45543
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=1.6e-23 Score=187.59 Aligned_cols=377 Identities=14% Similarity=0.071 Sum_probs=229.3
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+|+|+|++|. .|.+.++++.+++++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|+
T Consensus 53 ~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGv 127 (511)
T TIGR00806 53 LTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSV 127 (511)
T ss_pred HHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889887762 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 82 LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 82 ~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
++|...+...++.+|+|+++|+++.++...+..+|.++++++++++. .+|||+.. ..+.+......
T Consensus 128 aEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~--------s~gWr~y~------~Ln~Isl~s~~ 193 (511)
T TIGR00806 128 TMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV--------TLGWISYS------TLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCchhHH------HHHHHHHHHHH
Confidence 99998844999999999999999999999999999999999999944 46776533 44555555555
Q ss_pred HHHHHHHhcccccCCCC--CCCCcccchhHhhhhhhhhhh--hh---hc-------CCCCchhhhccchhHHHHHHHHHH
Q 014686 162 GVTIAAFWLPETLHRHN--DDDDSCDVSYDALESASAEVK--EE---EG-------REATPKKSLLKNWPLMSSIIVYCV 227 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
+.++..+++|..++..- ++++..+....+.++..++.. +. +. .-....++..+|+.++.-.+-+.+
T Consensus 194 ~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~ 273 (511)
T TIGR00806 194 FSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVF 273 (511)
T ss_pred HHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence 56677788885544211 110000000000000000000 00 00 001123444667766554444444
Q ss_pred HHhhhhhHHHHHH-HhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014686 228 FSLHDMAYSEIFS-LWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 306 (420)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
....+....++.. +|-......+ ...|..-++..+.+.+..+ ..+++..+..+...+.++.....-+.+++
T Consensus 274 a~~g~~qv~~Y~Q~LW~~v~~~~~------~yNG~veA~~tllga~~a~-~ag~~~~~w~~~~~l~l~v~s~~~~gll~- 345 (511)
T TIGR00806 274 NSAGYYLITYYVHTLWGTLDESLN------KYNGAVDAASTLLGAITSF-IAGFVNIRWARWSKLLIAVVSAIQAGLVF- 345 (511)
T ss_pred HhhHHHHHHHHHHHHHHHcCCCcc------ccCCHHHHHHHHHHHHHHH-HHHhhcCCchhhHHHHHHHHHHHHHHHhh-
Confidence 4333333322222 2221111011 1335555555555666655 45555444333223333333222222222
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhh--cc
Q 014686 307 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK--RL 384 (420)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~--~~ 384 (420)
++... ...++..+..+++........++...-+++....+.-|..+|+++.+.-+-+.+-..+. .|..+- ..
T Consensus 346 ~m~~t---~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV---vd~~gl~l~i 419 (511)
T TIGR00806 346 WMSQS---HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV---SDKRGLGLQV 419 (511)
T ss_pred hhhcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE---EcccccCCCc
Confidence 11111 12334455555555666677777788788878888889999999988877666555443 222110 00
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 385 DASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 385 ~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
...+ .-|..-|.+.+.+.++..++...
T Consensus 420 ~~Qf-~vY~~yf~~~~~i~~~~~~~~~~ 446 (511)
T TIGR00806 420 RKQF-RIYSVYFLVLSIICFFGAGLDGL 446 (511)
T ss_pred eeEE-EehhhHHHHHHHHHHHHHHHHHh
Confidence 0011 02334566666666666554443
No 97
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.92 E-value=1.3e-22 Score=180.87 Aligned_cols=352 Identities=15% Similarity=0.148 Sum_probs=230.4
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHH--HHH-HHHhhhh----hHH-HHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV--IFN-TLFGLSV----NFW-MAVL 74 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~--~~~-~~~~~~~----~~~-~l~~ 74 (420)
++.|+|.+| +|.+.++..+...+.+|+.|.++||.|.||-++....... .+. +...+.| |++ ..++
T Consensus 36 ~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~ii 109 (412)
T PF01306_consen 36 QVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAII 109 (412)
T ss_dssp HHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHH
T ss_pred cccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899999 9999999999999999999999999996665543332221 122 2222222 222 1222
Q ss_pred HHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHH
Q 014686 75 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC 153 (420)
Q Consensus 75 ~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~ 153 (420)
+-+..|+......|. .+++.++. ++.+.-.|-..+..++|.+++..++|.+.+. + ....+
T Consensus 110 g~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--------~---------p~~~f 170 (412)
T PF01306_consen 110 GGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--------N---------PNIIF 170 (412)
T ss_dssp TTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--------H---------HHHHH
T ss_pred HHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--------C---------ccHHH
Confidence 222333333334444 55554443 3445667888999999999999999999861 1 11223
Q ss_pred HHHHHHHHHHHHHHHhc-ccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhh
Q 014686 154 LCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHD 232 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~l-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++....+++..++.+.. |+.+++.+.++.+..+. ++.+.+...+++|+|++|...+.........
T Consensus 171 wi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y 236 (412)
T PF01306_consen 171 WIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------DKVSLKDVLSLFKMRNFWFFVLFVIGVAAIY 236 (412)
T ss_dssp HHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------------HHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------CCCcHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 34444444433333333 33332221111110000 1111223568899999999888777766666
Q ss_pred hhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014686 233 MAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS 312 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (420)
..+.+.++.|....... .+.+....|.+.+..-+.+++.- ...+++.+|+|.|+.+.++..++.+-.....+.++..
T Consensus 237 ~vfdqqf~~y~~~~f~~--~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~ 313 (412)
T PF01306_consen 237 DVFDQQFPIYFASFFQS--AGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPW 313 (412)
T ss_dssp HHHHHHHHHHHHHTSSS--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHH
T ss_pred HHHHHHHHHHHHHHhcc--cccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchH
Confidence 77777777777654222 45667788999998777777774 4899999999999999999998888877776654322
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHH-HHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 313 GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA-MTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
.+...-.+-+.-.........-++++.+|++..++...+. +...+++..+.+.+.|.++|+. |
T Consensus 314 ------~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~----------G 377 (412)
T PF01306_consen 314 ------VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI----------G 377 (412)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH----------H
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc----------C
Confidence 3445555555666677777888889999999999999986 5667999999999999999999 8
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 014686 392 SQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~~~~~~ 412 (420)
++.+|++.+.+.++..++..+
T Consensus 378 ~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 378 FQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhee
Confidence 999999999988888777776
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=3.6e-22 Score=188.68 Aligned_cols=377 Identities=13% Similarity=0.045 Sum_probs=215.6
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSV-NFWMAVLTRFLL 79 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~ 79 (420)
++++|.++++ .+++.+.+........+++|+++|| +|||+++..+.++..++..++++++ +.+.+.++|+++
T Consensus 49 ~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~ 122 (500)
T PRK09584 49 VKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATI 122 (500)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 4678998888 8888888776666667899999999 5999999999999999999998874 566777889999
Q ss_pred hhhccchhhh-Hhhhhhhchhhh--hhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
|++.|...+. .+++.|++|+++ |.+++++.+.+.++|..+||.+++++.+ .+|||+.| .+.
T Consensus 123 gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~-------~~g~~~~F---------~i~ 186 (500)
T PRK09584 123 AVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA-------KYGWSVAF---------ALS 186 (500)
T ss_pred HHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH-------hhCHHHHH---------HHH
Confidence 9999988887 899999998643 5568899999999999999999999998 56666555 444
Q ss_pred HHHHHHH----HHHHHhcccccCCCCCC-CCcccchhH-----------h-hhhhhhhhh------------hhhcCCCC
Q 014686 157 SLFAFGV----TIAAFWLPETLHRHNDD-DDSCDVSYD-----------A-LESASAEVK------------EEEGREAT 207 (420)
Q Consensus 157 ~~~~~~~----~~~~~~l~e~~~~~~~~-~~~~~~~~~-----------~-~~~~~~~~~------------~~~~~~~~ 207 (420)
++..++. +.....++|..+..+++ .+..+.... . .....+... ...... .
T Consensus 187 ~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 265 (500)
T PRK09584 187 VVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEA-F 265 (500)
T ss_pred HHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-h
Confidence 4322222 12233344432111111 111110000 0 000000000 000000 0
Q ss_pred chhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcC----cccCCccCCchhhHHHHHHHHHHHHHHHHHHHH---HH
Q 014686 208 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS----PKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLY---PF 280 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~ 280 (420)
...+.-|+| .+...... +............+.++.. .......|+. ...+.+.+.+.+..++...+.. ++
T Consensus 266 ~~~~~~~~~-~~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~ 342 (500)
T PRK09584 266 AMKGAARRK-MIVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNK 342 (500)
T ss_pred hcCHHHHHH-HHHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 001111222 22222211 1111112222222222211 1000111211 1234455555655555544332 33
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhH
Q 014686 281 LERILGPIMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGI 357 (420)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 357 (420)
+.||.+..+.+.++..+.+++.+......... +...........++.+.+.....|....++.+..|++.||+++|+
T Consensus 343 l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~ 422 (500)
T PRK09584 343 MGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGS 422 (500)
T ss_pred hCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHH
Confidence 44444556777778888888777765543321 111122455666677788999999999999999999999999996
Q ss_pred HHHHHHHHHHHhhhhhhHHHHhhhhcc---CC-CCCCCchHHHHHHHHHHHHHHH
Q 014686 358 AMTGMSLFKAAGPAGGGALFSWAQKRL---DA-SFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 358 ~~~~~~~g~~~g~~~~g~l~~~~~~~~---~~-~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
......+|.. +.|.+.+...... ++ ....++...|...+.++++..+
T Consensus 423 ~~l~~a~g~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~ 473 (500)
T PRK09584 423 WFLTTAGAAL----IAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAV 473 (500)
T ss_pred HHHHHHHHHH----HHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 6555554444 4444444322100 00 0011366778777766654443
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.92 E-value=1.1e-21 Score=180.77 Aligned_cols=385 Identities=16% Similarity=0.134 Sum_probs=243.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhh----hcCCchhHHHH-HHHHHHHHHHHhhhhhHHH------
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVIIMG-TASVVIFNTLFGLSVNFWM------ 71 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grk~~l~~~-~~~~~~~~~~~~~~~~~~~------ 71 (420)
+++|.++.+ .+++..+..+...+.+|+.|+++| |+||||.++.. .....++..+.+++++...
T Consensus 32 ~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~ 105 (477)
T TIGR01301 32 QELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNL 105 (477)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccc
Confidence 467888888 999999999999999999999999 59999998774 6666777777777766432
Q ss_pred -----------HHHHHHHhhhhccchhh-hHhhhhhhchhhhh--hhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcc
Q 014686 72 -----------AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQ--ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 137 (420)
Q Consensus 72 -----------l~~~r~l~G~~~g~~~~-~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~ 137 (420)
++++-.+..++.....+ ..++++|.+|+++| +++.++.+...++|.++|+.+++...... .
T Consensus 106 ~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~-----~ 180 (477)
T TIGR01301 106 DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYK-----I 180 (477)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----h
Confidence 22222233335554444 49999999998865 57999999999999999999998752100 1
Q ss_pred ccccc--ccc--CccchHHHHHHHHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhh
Q 014686 138 FSSES--LFG--KFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 212 (420)
Q Consensus 138 ~gw~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (420)
+++.. ..+ -.+++..|.+.++..++. ++..+..||.+...+++.++++. + ++++.+.....+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~i 249 (477)
T TIGR01301 181 FPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEA-----A------PPSKHGEEAFFGEL 249 (477)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhc-----c------cccccchhhhHHHH
Confidence 11100 000 124566677776665554 45567788876432211100000 0 00000011122233
Q ss_pred cc-----chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCc----cCCchh--hHHHHHHHHHHHHHHHHHHHHHHH
Q 014686 213 LK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG----LNYSTQ--MVGEVLAITGFSLLVFQLSLYPFL 281 (420)
Q Consensus 213 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~ 281 (420)
++ .|.++...+..++..+..+.+..+.+.|..+.....+ ..++.. .-........+...+.++ +.+.+
T Consensus 250 ~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~-~l~~l 328 (477)
T TIGR01301 250 FGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSI-GMEKL 328 (477)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 32 3556777777776665555554444444332211100 011111 012233344445555555 56778
Q ss_pred HHhhch-HHHHHHHHHHHHHHHHHHHHHHHhhh---------------hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhc
Q 014686 282 ERILGP-IMVARIAGVLTIPLLTSYPYIAMLSG---------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRA 345 (420)
Q Consensus 282 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (420)
.|++|+ |+....+.++..+++....+...... ........+.....|+.....+...++++++.
T Consensus 329 ~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 329 CRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 888884 67778887787777777765543111 01123344555566677888899999999998
Q ss_pred CCc--chhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 346 VDQ--DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 346 ~~~--~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
.++ +..|..+|+.|.+..+.+.+.....|.+.+..++ +....+.+.++..+++.++.++ .+|+.+
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------~~~~~~~~~gv~~~~aa~~~~~-~~~~~~ 475 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------GNLPAFVVGAVAAFVSGLLALI-LLPRPR 475 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCeeHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence 884 5669999999999999999999999997776643 3456778888888888888877 666543
No 100
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.92 E-value=5.2e-22 Score=185.19 Aligned_cols=344 Identities=14% Similarity=0.134 Sum_probs=222.7
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+|+|-++ . ..|+.+.+.++..++.++.|+++|.||||.+++.+.++..++.++++.++|...++++-.+.|+|
T Consensus 72 ~diG~~~-~------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg 144 (599)
T PF06609_consen 72 ADIGGSD-N------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG 144 (599)
T ss_pred HhcCCCc-c------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh
Confidence 4666553 4 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHH
Q 014686 83 NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG 162 (420)
Q Consensus 83 ~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 162 (420)
.|........++|..|.|.|....++.....-.....+|.++..+.. ..+|||.| .+..+...+
T Consensus 145 aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~---------~~~~i~~~i 208 (599)
T PF06609_consen 145 AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIF---------YIFIIWSGI 208 (599)
T ss_pred hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHH---------HHHHHHHHH
Confidence 88776666679999999999888877776655555567777766655 45666555 333333333
Q ss_pred HH--HHHHhcccccCCCCCCCCcccchhHhhhh---------------------h-hhhh--------------------
Q 014686 163 VT--IAAFWLPETLHRHNDDDDSCDVSYDALES---------------------A-SAEV-------------------- 198 (420)
Q Consensus 163 ~~--~~~~~l~e~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~-------------------- 198 (420)
.+ ...++.|++++..+.++...++...+++- . ..+.
T Consensus 209 ~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~ 288 (599)
T PF06609_consen 209 ALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFV 288 (599)
T ss_pred HHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHH
Confidence 22 22333443322211111111111111110 0 0000
Q ss_pred -hhh--hcCCCCchhhhccc-hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCch---hhHHHHHHHHHHHHH
Q 014686 199 -KEE--EGREATPKKSLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST---QMVGEVLAITGFSLL 271 (420)
Q Consensus 199 -~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~ 271 (420)
.|. ..+++....+++|+ |.+...++..++..+.+.+...++|...... ++-++ ...+......+.+..
T Consensus 289 ~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~~~~~~~~~~s~~~~fg~~ 363 (599)
T PF06609_consen 289 VWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDPISITEIGWISSPVGFGSC 363 (599)
T ss_pred HhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCCcccceeehhhhhHHHHHH
Confidence 022 12345567788998 4555555566666666666666777665544 23222 245667677777777
Q ss_pred HHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcch
Q 014686 272 VFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ 350 (420)
Q Consensus 272 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (420)
.+.. +.+.+.++.++ |..+..+..++.+++.++......+....+ ...++.+++.+..........+-..|+++
T Consensus 364 ~g~~-i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i----~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 364 AGAV-ILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAI----AFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHH-HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHH----HHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 7766 45555555555 445456665555544444433322222222 22333334444455555666666789999
Q ss_pred hhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 351 RGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 351 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
.|++.|+..+++.+|+.+|..+...++..
T Consensus 439 ig~a~gL~~s~R~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 439 IGTATGLTGSIRSIGGSIGYAIYNAIFTN 467 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 99999999999999999999998777654
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=5.4e-20 Score=170.67 Aligned_cols=364 Identities=18% Similarity=0.137 Sum_probs=256.8
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhH-HHHHHHHHHHHHHHhhh-hh-HHHHHHHHHHhhhhccchhhh-
Q 014686 14 IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI-IMGTASVVIFNTLFGLS-VN-FWMAVLTRFLLGSLNGLLGPI- 89 (420)
Q Consensus 14 ~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l-~~~~~~~~~~~~~~~~~-~~-~~~l~~~r~l~G~~~g~~~~~- 89 (420)
.+.+.++..++..+..++..|+.|.++|+-|+||.+ .....+..+++....+. ++ ++...+.-++.-++.+.....
T Consensus 68 ~~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 68 TSSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999865554 55556666666666663 43 433333344444566666666
Q ss_pred Hhhhhhhchhhhh--------------------------hhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcccccccc
Q 014686 90 KAYACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 143 (420)
Q Consensus 90 ~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~ 143 (420)
.+++.|..+++++ ++..+.-.....+|.++.-.+.-.+....++ . .
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~-------~-~ 219 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGS-------T-A 219 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------c-c
Confidence 8999999998888 8999988888889988887777665542111 0 0
Q ss_pred ccCccchHHHHHHHHHHHH-HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHH
Q 014686 144 FGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 222 (420)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (420)
-+..+.|..+.+.++.-++ .+...+++||.|+.++.++.. ....... ++.....+++.|.|.....+
T Consensus 220 ~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-~~~~~g~-----------~~l~~t~k~~~~~~~~~~fL 287 (477)
T PF11700_consen 220 SNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-SYLRFGF-----------KRLWRTFKEIRKLRQLFLFL 287 (477)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-hHHHHHH-----------HHHHHHHHHHHhChHHHHHH
Confidence 0133456666666666555 345567788776532221111 1110000 01123456667788888888
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHH
Q 014686 223 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTIP 300 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 300 (420)
+.++++.-...........|..+. +|++..+...+.....+.++++++ +.++++||+|.| +.+........+
T Consensus 288 ia~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga~-~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 288 IAYFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGAL-LFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 988888877777777778887766 899999999999999999999988 778999999988 666666555433
Q ss_pred HHHHHHH--HHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHH
Q 014686 301 LLTSYPY--IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 378 (420)
Q Consensus 301 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 378 (420)
..+...+ .+...+......+.+..++.+.+.+..++...++.+++.|+++.+..+|+........+.+||.+.|.+.+
T Consensus 362 i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 362 IPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 11111112222355566677788889999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 379 WAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 379 ~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.++ +.+..+....++.+++.++...
T Consensus 442 ~tg---------~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 442 ATG---------SQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HhC---------CchhHHHHHHHHHHHHHHHHhh
Confidence 994 4778888888888888777655
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.90 E-value=1.6e-20 Score=176.22 Aligned_cols=334 Identities=16% Similarity=0.072 Sum_probs=212.2
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh----cCCch-hHHHHHHHHHHHHHHHhhhhh------HH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP-VIIMGTASVVIFNTLFGLSVN------FW 70 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grk~-~l~~~~~~~~~~~~~~~~~~~------~~ 70 (420)
.+++|++..+ +|.+.++..+..++..|+.|.++|| +|||| .++.+.+..+++..+....++ +.
T Consensus 37 t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 37 TDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 3678899989 9999999999999999999999998 78754 455677777777665544432 45
Q ss_pred HHHHHHHHhhhhccchhhh-Hhhhhhhc-hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCcc
Q 014686 71 MAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 148 (420)
Q Consensus 71 ~l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~ 148 (420)
.+++..++.+.+.....+. .++.+|+. ++++|.+..++.....++|..+++.+...+.. .++... . +.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~-------~~~~~~-~-~~g 181 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVD-------ILGKGD-E-QKG 181 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCCc-h-hhh
Confidence 6666666667655554444 88899988 56889999999988889988888876665554 121110 0 335
Q ss_pred chHHHHHHHHHHHHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHH
Q 014686 149 YFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 227 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
|+....+.++..++..+ ..+..+|.++.++ + + +.+..+..++++|||+++......++
T Consensus 182 ~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~--~-~------------------~~~~~~~~~~~~~n~~~~~l~~~~~~ 240 (444)
T PRK09669 182 YFYAMMVMGLLGVVLFFCCFFMTKERYTPEV--D-N------------------SSSVWKDLKLLLGNSQWRIMFIFNVV 240 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeEEecCCCC--c-C------------------CCCHHHHHHHHhCCchHHHHHHHHHH
Confidence 56555555555544433 3334454322111 0 0 00112345678899998887776665
Q ss_pred HHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Q 014686 228 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPY 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
............+ |+.+.. .+ +++..+.......+..+++.+ +.+++.||+|+|+....+.....+.......
T Consensus 241 ~~~~~~~~~~~~~-y~~~~~----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 313 (444)
T PRK09669 241 LLTAVVTRGGATL-YYVNYV----LL-RPDLATLFLVTGMIAGLFGAL-LSERLLGKFDRVRAFKWTIVAFVILSALIFF 313 (444)
T ss_pred HHHHHHHHhhhhh-eeeeee----cC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 5444433333333 332221 22 223333444444455555544 6778888899999888776655443332222
Q ss_pred HHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 308 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
.. .. . ...+.+...+.+++.....+..+++.+|..+ .+..|...|..+....+|..+|+.+.|.+.+..
T Consensus 314 ~~--~~-~-~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 314 IP--PS-N-VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hC--cc-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 21 11 1 2223334445566677778888899988775 334567789999999999999999999999987
Q ss_pred hh
Q 014686 381 QK 382 (420)
Q Consensus 381 ~~ 382 (420)
+-
T Consensus 390 Gy 391 (444)
T PRK09669 390 DY 391 (444)
T ss_pred CC
Confidence 54
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.90 E-value=7.6e-22 Score=184.93 Aligned_cols=347 Identities=13% Similarity=0.040 Sum_probs=221.8
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcC-----CchhHHHHHHHHH-HHHHHHhhhhhHHHHH-H
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMGTASVV-IFNTLFGLSVNFWMAV-L 74 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rk~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~ 74 (420)
.+++|+++++ ++...+...+...+-.+ +|+++||++ ||+.++++.++.. +.....+..++..... +
T Consensus 53 ~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 53 TDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 4678999999 99999999999988655 999999998 7777777776663 4434344445544444 4
Q ss_pred HHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHH---HHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccch
Q 014686 75 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLST---VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 150 (420)
Q Consensus 75 ~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~---~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~ 150 (420)
.+++.+++.+...++ .++..|..+ |++....+. .....++|.++|+.++|.+.+ .++|+..|
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~-------~~~~~~~f------ 191 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD-------KTLTRILF------ 191 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH-------hcCcchHH------
Confidence 788999998888887 999999998 555443333 334445899999999999998 55565544
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHH-HH
Q 014686 151 LPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV-FS 229 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 229 (420)
.+.+...++..+...++||+++....+.++++. ...........+..++......+.+++|.++...+..++ +.
T Consensus 192 ---~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~ 266 (468)
T TIGR00788 192 ---LITAALLLLQLFVSNLSKERRAFVRPRIGTYLE--MNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA 266 (468)
T ss_pred ---HHHHHHHHHHHHHHHhcccccccccccccccch--hhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh
Confidence 555555555555567788864211111100000 000000000000000111234455778887765554444 22
Q ss_pred hhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 014686 230 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
..... ..+.++ ...+..|+++.+.|......+++.+++.. ..++..+|++.|+.+..+.++..++........
T Consensus 267 ~~~~~---~~~~f~---~~~~~lG~s~~~~G~~~~~~~v~~i~g~~-~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~ 339 (468)
T TIGR00788 267 NLPGA---SGSVFC---ATTQCLPGGPSFSGMSKVVGNLGSLCGVG-GYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILV 339 (468)
T ss_pred hcCCC---CceeEE---EEcccCCCCcchhhhHHHHHHHHHHHHHH-HHHHHHhhCCHHHHHHHHHHHHHHHHhCceeee
Confidence 11111 111111 12234899999999999999999999988 455555788999998888887777654432111
Q ss_pred Hhhh----hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 310 MLSG----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 310 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
.... ......+.....+..+...........++++..|++.+|+.+++.+.+.++|..+++.++|.+.++.+
T Consensus 340 ~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 340 KRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 01111222333334444455566668888999999999999999999999999999999999999885
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=8.3e-20 Score=168.99 Aligned_cols=376 Identities=15% Similarity=0.069 Sum_probs=210.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-CCchhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNTLFGLSV-NFWMAVLTRFLL 79 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~ 79 (420)
++++|.++.+ .+.+.+.+.....++.++.|+++||+ ||||+++++.++..++.++.+..+ +...+.++..+.
T Consensus 37 ~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li 110 (493)
T PRK15462 37 TNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAII 110 (493)
T ss_pred HHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHH
Confidence 3567889888 99999999999999999999999999 999999999999999987776543 223344444455
Q ss_pred hhhccchhhh-Hhhhhhhchhh--hhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
.++.|...+. .++++|.+|++ +|.+++++...+.++|..++|.+.+++.+ ..||+..| ...
T Consensus 111 ~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~-------~~Gw~~~F---------~ia 174 (493)
T PRK15462 111 VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE-------EYSWAMGF---------GLA 174 (493)
T ss_pred HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh-------hhChHHHH---------HHH
Confidence 5666777675 88999999875 69999999999999999999999999988 55665544 444
Q ss_pred HHHHHHHHHHHHh----cccccCCCCCCCCcccchh---------H----hhhhhh-hhhhhh----------------h
Q 014686 157 SLFAFGVTIAAFW----LPETLHRHNDDDDSCDVSY---------D----ALESAS-AEVKEE----------------E 202 (420)
Q Consensus 157 ~~~~~~~~~~~~~----l~e~~~~~~~~~~~~~~~~---------~----~~~~~~-~~~~~~----------------~ 202 (420)
++..++.++..+. +++....++++.++++... . ...... .+.... .
T Consensus 175 aigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (493)
T PRK15462 175 AVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKI 254 (493)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333332222222 2221111111111000000 0 000000 000000 0
Q ss_pred cCCCCchhhhccchhHHHHH---HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 014686 203 GREATPKKSLLKNWPLMSSI---IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 279 (420)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 279 (420)
...+.+..+ |+ +.+... +...++...+....+.+..|..+....+-.|++- ..+...+.+.+..++.++++..
T Consensus 255 ~~~~~~~~e--r~-r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p~~~~qslNp~~ii~l~P~~a~ 330 (493)
T PRK15462 255 YRKAENQKQ--RK-ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTV-PTAMFQSINAFAVMLCGVFLAW 330 (493)
T ss_pred HHhcCCHHH--Hh-hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceee-CHHHHHhHhHHHHHHHHHHHHH
Confidence 000011011 11 222222 2222222222222233444444332222133321 2344556666666666554444
Q ss_pred HHHHhhch------HHHHHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcch
Q 014686 280 FLERILGP------IMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ 350 (420)
Q Consensus 280 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (420)
...++.++ ..-...+.++..++.+.+....... ......+++...++...+.....|...+.+++..|++.
T Consensus 331 lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~ 410 (493)
T PRK15462 331 VVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV 410 (493)
T ss_pred HHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH
Confidence 33332111 1124566666666665554432211 11233335566667788999999999999999999999
Q ss_pred hhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCC------CCCCchHHHHHHHHHHHHH
Q 014686 351 RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS------FLPGSQMVFFVLNVVEAIG 406 (420)
Q Consensus 351 ~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~------~~~g~~~~f~~~~~~~~~~ 406 (420)
+|..+|+..... .++++.+.|.+.+......... ....+...|...+.+.++.
T Consensus 411 ~g~~mg~w~l~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 411 TGVLTGIYMLLS---GAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 999999884422 2445555555555442111000 0114566777777665554
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=1.1e-20 Score=177.65 Aligned_cols=372 Identities=12% Similarity=0.082 Sum_probs=235.1
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh------hhHHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS------VNFWMAVL 74 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~------~~~~~l~~ 74 (420)
+++++|+|..| .+++.++. ......+++.|++.||+|||+++.++.+++.++.++++++ ++++.+++
T Consensus 53 L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 53 MQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 35789999999 89888774 3455678889999999999999999999999999999997 68999999
Q ss_pred HHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHH-HHHHHhHhccccccCCccccccccccCccchHH
Q 014686 75 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 75 ~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
.|++.|++.+...+. ...+.+++| ++||++.++...+.++|.++ +++..+++.+ +|+. .
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~---------~~~~---------~ 186 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD---------NTSA---------Y 186 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hHHH---------H
Confidence 999999998887776 888899986 68999999999999999986 4444444432 2222 1
Q ss_pred HHHHHHHHHH-HHHHHHhccccc--CCC--CCCCCcccch-----------------h---------------------H
Q 014686 153 CLCISLFAFG-VTIAAFWLPETL--HRH--NDDDDSCDVS-----------------Y---------------------D 189 (420)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~l~e~~--~~~--~~~~~~~~~~-----------------~---------------------~ 189 (420)
++..++..++ .++...++++.+ .+. +++.+++++. . +
T Consensus 187 fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~ 266 (591)
T PTZ00207 187 FFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALV 266 (591)
T ss_pred HHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHH
Confidence 2333333333 333444444333 211 1111111111 0 0
Q ss_pred ----------------hh----------------hhh--h-h-h--hh------------hh-------h---cCCCCch
Q 014686 190 ----------------AL----------------ESA--S-A-E--VK------------EE-------E---GREATPK 209 (420)
Q Consensus 190 ----------------~~----------------~~~--~-~-~--~~------------~~-------~---~~~~~~~ 209 (420)
.+ +.. . + + .. +. + ++...+.
T Consensus 267 ~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~ 346 (591)
T PTZ00207 267 AYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETF 346 (591)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchH
Confidence 00 000 0 0 0 00 00 0 0011255
Q ss_pred hhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCcc-CCchhh--HHHHHHHHHHHHHHHHHHHHHHHH----
Q 014686 210 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL-NYSTQM--VGEVLAITGFSLLVFQLSLYPFLE---- 282 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~---- 282 (420)
.+.+++..+|.....+++.........+-..+.... + |.+.+. ...+.+..++.+.+|++ ..+..+
T Consensus 347 ~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s------l~g~~~~~~~~~~~vsL~si~~~~GRl-~~g~~~~~~~ 419 (591)
T PTZ00207 347 IEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA------LAGEAPDDALNTLLTVLNGVGSAVGRL-CMSYFEIWSQ 419 (591)
T ss_pred HHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH------hcCCCCCccceeeehhhhhHHHHhhHH-HHHHHHHHHH
Confidence 666778889988888888766655554444433332 3 442222 22266777888888877 555555
Q ss_pred Hhhc----hHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHH
Q 014686 283 RILG----PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIA 358 (420)
Q Consensus 283 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 358 (420)
+|.. +|+........+.++.+++... .+. ..+.+..++.++..+...+.....++|++. ++-|+-+-+.
T Consensus 420 ~~~~~~r~prt~~l~~~~~~~~~~lll~~~--~p~----~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~ 492 (591)
T PTZ00207 420 KRRAEDRVPITIALFIPSVCIITMLTLFLT--LPK----AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFC 492 (591)
T ss_pred hhccccccchhHHHHHHHHHHHHHHHHHHH--CCc----cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHH
Confidence 3321 1122222222233333333222 111 135566666677788888999999999999 9999999888
Q ss_pred HHHHHHHHHHh-hhhhhHHHHhhhhccCCC---CCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 359 MTGMSLFKAAG-PAGGGALFSWAQKRLDAS---FLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 359 ~~~~~~g~~~g-~~~~g~l~~~~~~~~~~~---~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
....-+|..+- -.+.|.+||.-.+..+.. ...=++.+|++++++++++.+....
T Consensus 493 ~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 493 FLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 88888888776 678899999865332211 1113778999999999988777554
No 106
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.4e-22 Score=163.77 Aligned_cols=365 Identities=16% Similarity=0.140 Sum_probs=237.4
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFG---LSVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l 78 (420)
+|.+++..+ ..++.+.|+....+-..+.|++.|| +|.|..-++-++...++.++++ ..+.+|.+..+|++
T Consensus 72 ~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~ 145 (459)
T KOG4686|consen 72 LDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFL 145 (459)
T ss_pred cccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhee
Confidence 455566667 8899999999999999999999996 6888777776667777777765 47899999999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
.|+|.-....+ ..++.-|++.|+.+.++|+.....-+|..+--.+.+++++..+......|-. .. +.+. ....
T Consensus 146 FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT-~L---G~~l--~~~~ 219 (459)
T KOG4686|consen 146 FGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHT-LL---GLWL--CFEV 219 (459)
T ss_pred eccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHH-HH---HHHH--HHHH
Confidence 99987777777 9999999999999999999999999999988888888887433211001100 00 0000 0111
Q ss_pred HHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHH
Q 014686 158 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 237 (420)
Q Consensus 158 ~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
......++....+- ...++. |++...++... .+.++.....-+ .|++|...+.++++....+.+.+
T Consensus 220 ~tc~~slical~lg----~~D~rA-------erilh~e~g~~--Ge~pkLtdv~~f-~ppfw~~~iicv~yyva~fPFi~ 285 (459)
T KOG4686|consen 220 KTCKQSLICALSLG----LSDDRA-------ERILHLEEGFL--GEEPKLTDVNTF-YPPFWVLVIICVLYYVAWFPFIT 285 (459)
T ss_pred HHHHHHHHHHHHhh----hhhhHH-------HHHHhhhcCcc--cCCccccccccc-CccHHHHHHHHHHHHHHHHHHhh
Confidence 11111111111110 000000 00000000000 001111111112 46788888888888888777777
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLA 317 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
.-|.++++. +|+|+..++.+.+.....+.+.+. +.+.+.||.|++.....+..+..+..-.....+..+ .+
T Consensus 286 lg~~fF~~r-----fGlS~~~a~~i~s~vy~Isav~sp-vfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls---Py 356 (459)
T KOG4686|consen 286 LGPMFFQKR-----FGLSAVSAGNILSTVYGISAVLSP-VFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS---PY 356 (459)
T ss_pred hhHHHHHHh-----hCCChhhccchhhhhhhhhhhhhh-hHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc---HH
Confidence 777777666 899999999999888888888877 667788888887666655544433322222222111 12
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHH
Q 014686 318 FLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFF 397 (420)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~ 397 (420)
....+.+..........+..++..+|+++.|++.|.++.++++|-++.|.+.|.+.|..++.+ .....|+
T Consensus 357 ----~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~------~le~ffl 426 (459)
T KOG4686|consen 357 ----TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD------NLEAFFL 426 (459)
T ss_pred ----HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh------hHHHHHH
Confidence 222223334444555567778888999999999999999999999999999999999875432 3455566
Q ss_pred HHHHHHHHHHHHHhh
Q 014686 398 VLNVVEAIGVLMTFK 412 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (420)
..+.+.+.+..+.+.
T Consensus 427 ~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 427 IIGLMALTSVGILFY 441 (459)
T ss_pred HHHHHHHHHHHHHhh
Confidence 666666666655554
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=7e-20 Score=172.88 Aligned_cols=341 Identities=13% Similarity=0.074 Sum_probs=214.9
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhh----hcCC-chhHHHHHHHHHHHHHHHhhhh------hHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPVIIMGTASVVIFNTLFGLSV------NFWM 71 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-k~~l~~~~~~~~~~~~~~~~~~------~~~~ 71 (420)
+.+|++..+ +|.+..+.-+.-++..|+.|.++| |+|| |+.++.+.+..+++..+....+ .+..
T Consensus 35 ~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 35 DVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 456888888 999999999999999999999999 6698 5556667777777765554433 1345
Q ss_pred HHHHHHHhhhhccchhhh-Hhhhhhhc-hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccc
Q 014686 72 AVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 149 (420)
Q Consensus 72 l~~~r~l~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~ 149 (420)
+++.-++.+++.....+. .++..|.. ++++|.+..+......++|..+.+.+...+.+ .+|.... +.+|
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~-------~~g~~~~--~~g~ 179 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN-------YVGGGDR--GFGF 179 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCCch--hhhH
Confidence 555666677776666555 88999998 58999999998778788877766665554433 1221100 1234
Q ss_pred hHHHHHHHHHHHHHH-HHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHH
Q 014686 150 FLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 228 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~-~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+....+.++..++.. ...+..||.++..+.++++++ +.+..+..+.++|||+++..+...++.
T Consensus 180 ~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~ll~~~~~~ 243 (473)
T PRK10429 180 QMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS----------------HLTLKDIVALIYKNDQLSCLLGMALAY 243 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc----------------CCCHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 444444444444333 333445664322111100000 011122345567899888877777666
Q ss_pred HhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014686 229 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
...........++|.... .+ +....+.+.....+..+++.+ +.+++.||+|+|+.+..+..+..++.+.+...
T Consensus 244 ~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~~-~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~ 316 (473)
T PRK10429 244 NIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTLI-LFPRLVKSLSRRILWAGASIFPVLSCGVLLLM 316 (473)
T ss_pred HHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 655444444444333322 22 345566666666677777766 67889999999999887776655554443322
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 309 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
....... ...+.+...+.+.......+...++.+|..| .+..|..+|..+....++..+++.+.|.+.+..+
T Consensus 317 ~~~~~~~-~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 317 GLAAPHN-ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred hccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111111 2223334444555666677777888888755 3445669999999999999999999999998765
Q ss_pred h
Q 014686 382 K 382 (420)
Q Consensus 382 ~ 382 (420)
-
T Consensus 396 y 396 (473)
T PRK10429 396 Y 396 (473)
T ss_pred C
Confidence 3
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.88 E-value=2e-19 Score=159.44 Aligned_cols=293 Identities=16% Similarity=0.128 Sum_probs=201.4
Q ss_pred hhhhhHHHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcc-cccc
Q 014686 64 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSE 141 (420)
Q Consensus 64 ~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~-~gw~ 141 (420)
+...+++.++++-++.|.|.+...+. +.++++..++|++.+.+++.+..+++|..++|.+++.+.......... .+-.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999997 999999999999999999999999999999999999988421100000 0000
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHh--cccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHH
Q 014686 142 SLFGKFPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 219 (420)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (420)
... ...|+.+++..+...++..+.+.+ +||.++++.+ +.. + ++....++.+|+|.++
T Consensus 85 ~~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~-----~~~--------------~-~~~~~~~~~~~~~~~~ 143 (310)
T TIGR01272 85 NAE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA-----RVS--------------S-GDTTQKTSAFQFTHLV 143 (310)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc-----ccc--------------c-ccccchhhHHhhHHHH
Confidence 000 124566666454443333333333 3443221110 000 0 0001123467788888
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014686 220 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (420)
...+..+++.....+..++.+.|+.+. ..+|+++.+.+...+....+.+++++ +..++.||+++++.+..+..+..
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~---~~~g~s~~~a~~~~s~~~~~~~iGr~-~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDP---HALGLPEDQAAHFTAYTWGGAMVGRF-IGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHH
Confidence 877877887778888889999998643 12589999999999999999999988 78888889999888888777666
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 300 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
+..++..... ..... ....+.+++....+|...+...+..| ++.+++.++. ....+|+++.|.+.|.+.|.
T Consensus 220 ~~~~l~~~~~---~~~~~----~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 220 LLSIGAALTH---GYVAM----WFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHcC---CHHHH----HHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHh
Confidence 6554333221 11111 12224556778888998888888776 4466777775 67889999999999999998
Q ss_pred hhhccCCCCCCCchHHHHHHH
Q 014686 380 AQKRLDASFLPGSQMVFFVLN 400 (420)
Q Consensus 380 ~~~~~~~~~~~g~~~~f~~~~ 400 (420)
. |.+..|++..
T Consensus 291 ~----------g~~~a~~v~~ 301 (310)
T TIGR01272 291 L----------GIQLAFALPV 301 (310)
T ss_pred c----------cchHHHHHHH
Confidence 7 6777776433
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.88 E-value=1.6e-20 Score=175.31 Aligned_cols=336 Identities=14% Similarity=0.111 Sum_probs=240.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhh----hcCCchhH-HHHHHHHHHHHHHHhhh-h-------hH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVI-IMGTASVVIFNTLFGLS-V-------NF 69 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grk~~l-~~~~~~~~~~~~~~~~~-~-------~~ 69 (420)
+.+|+++.. .|.+..+..+..++..|+.|.++| |+||||.. +.+.+..+++..+.... | ..
T Consensus 30 ~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 30 DVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 455777777 999999999999999999999999 89976655 56778888888777765 4 23
Q ss_pred HHHHHHHHHhhhhccchhhh-Hhhhhhhch-hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCc
Q 014686 70 WMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 147 (420)
Q Consensus 70 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~ 147 (420)
..+.+.-++..++....... .++..|..+ +++|.+..+.-.....+|..+...+.+.+.+ .+|.... ..
T Consensus 104 ~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~-------~~g~~~~--~~ 174 (428)
T PF13347_consen 104 VWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVS-------WFGGGDT--SN 174 (428)
T ss_pred HHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhh-------hhccCcc--ch
Confidence 34566666667776666555 899999998 5789999999999999999877777777765 2221100 01
Q ss_pred cchHHHHHHHHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHH
Q 014686 148 PYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 226 (420)
Q Consensus 148 ~~~~~~~~~~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
+|+....+.++..++. ++..+..+|.+++.++++ ++.+..+..++++|||+++......+
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~-------------------~~~~~~~~~~~~~~nr~~~~l~~~~~ 235 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE-------------------KKISLRDSLRSLFRNRPFRILLLAFF 235 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeeccccccccc-------------------cccccccchhhhcccchHHHHHHHHH
Confidence 4566556666655554 344566677211111111 02223455788999999998888888
Q ss_pred HHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014686 227 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 306 (420)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
+............++|..+. .+.+ ...+.......+..+++.+ +.+++.||+|+|+....+..+.+++.+...
T Consensus 236 ~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~~-~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 236 LQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGSP-LWGRLSKRFGKKKVYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHHH-HHHHHHHHccceeehhhhHHHHHHHHHHHH
Confidence 87777666666666666554 4444 4456666666777777766 779999999999999999998888877766
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 307 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
+... .......+...+.+.+.........++.+|..+ ++..|...|+.+....++..+++.+.|.+.+.
T Consensus 309 ~~~~----~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 309 FLGP----GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHh----hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 6542 122334455555566667777888888888776 34579999999999999999999999999988
Q ss_pred hhhc
Q 014686 380 AQKR 383 (420)
Q Consensus 380 ~~~~ 383 (420)
.+-.
T Consensus 385 ~Gy~ 388 (428)
T PF13347_consen 385 VGYD 388 (428)
T ss_pred hCcC
Confidence 6543
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.87 E-value=4e-19 Score=166.99 Aligned_cols=328 Identities=17% Similarity=0.125 Sum_probs=201.1
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc----CCchhH-HHHHHHHHHHHHHH-hh----hh--hH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRKPVI-IMGTASVVIFNTLF-GL----SV--NF 69 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grk~~l-~~~~~~~~~~~~~~-~~----~~--~~ 69 (420)
++++|++..+ +|.+.+...+..++..++.|+++||. ||||.. ..+.+...+...+. .. ++ ..
T Consensus 36 ~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 36 TDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHH
Confidence 3567888888 99999999999999999999999996 777655 55555444443332 21 11 22
Q ss_pred HHHHHHHHHhhhhccchhhh-Hhhhhhhch-hhhhhhHHHHHHHHhH-----HHHHHHHHHHhHhccccccCCccccccc
Q 014686 70 WMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWG-----IGLIIGPALGGFLAQPAEKYPNLFSSES 142 (420)
Q Consensus 70 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~l~~~l~~~~~~~~~~~gw~~ 142 (420)
...++.-++.+++.+...+. .++..+..+ +++|.+..+.-..+.+ ++..++|.+++.... ..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~-------~~---- 178 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPE-------EM---- 178 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------ch----
Confidence 33444556677777766654 666666654 5678887766654433 455556665543321 00
Q ss_pred cccCccchHHHHHHHHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHH
Q 014686 143 LFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 221 (420)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (420)
...|.....+.++..++. ++.....||+++.+.++ . ......++++|||+++..
T Consensus 179 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----~------------------~~~~~~~~l~~n~~f~~~ 233 (448)
T PRK09848 179 ---VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----P------------------SLKISLQTLKRNRPLFML 233 (448)
T ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----C------------------CHHHHHHHHhCCchHHHH
Confidence 001111111222222222 22333445543211100 0 011235678999999888
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014686 222 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.+..++............+.|..+. +|.++...+.......+..+++.. +.+++.||+++|+.+..+..+..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~r~g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 234 CIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGTVASAP-LVPGMVARIGKKNTFLIGALLGTCG 307 (448)
T ss_pred HHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 8777776666566555555555444 566665555444443455555655 6777888889999999888877776
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc-------hhhHHhhHHHHHHHHHHHHhhhhhh
Q 014686 302 LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD-------QRGAANGIAMTGMSLFKAAGPAGGG 374 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~~~~~g~~~g~~~~g 374 (420)
.+.+.+.+. ...+ .......+.+.+.....+...++.++..|.+ ++|...|+.+....+|..+++.+.|
T Consensus 308 ~~~~~~~~~---~~~~-~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 308 YLLFFWVSV---WSLP-VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHcCc---hhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 655543221 1112 2233334455566667777788888877644 4699999999999999999999999
Q ss_pred HHHHhhh
Q 014686 375 ALFSWAQ 381 (420)
Q Consensus 375 ~l~~~~~ 381 (420)
.+.+..+
T Consensus 384 ~~l~~~G 390 (448)
T PRK09848 384 FILGLSG 390 (448)
T ss_pred HHHHHcC
Confidence 9988764
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.86 E-value=2.4e-19 Score=156.59 Aligned_cols=365 Identities=12% Similarity=-0.006 Sum_probs=250.0
Q ss_pred cchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchh-HHHHHHHHHHHHHHHhhhhh--H-HHHHHHHHHhhhhccchh
Q 014686 12 EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLG 87 (420)
Q Consensus 12 ~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~-l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~ 87 (420)
.+...+.+...++..+..++-+|+.|.++|+.|+||. +-....+..++.+...++++ + +..++.-.+..++.....
T Consensus 54 ~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~ 133 (438)
T COG2270 54 ASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSN 133 (438)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhh
Confidence 3455678999999999999999999999999996554 55566666667777777654 4 444455667777777767
Q ss_pred hh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhH--hccccccCCc-cccccccccCccchHHHHHHHHHHHHH
Q 014686 88 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF--LAQPAEKYPN-LFSSESLFGKFPYFLPCLCISLFAFGV 163 (420)
Q Consensus 88 ~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--l~~~~~~~~~-~~gw~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
.. .+++.|..++++-++..+.-.....+|+.+.-+..-. +.....+++. .++-...- ...-|..+.+.++--++.
T Consensus 134 Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~ 212 (438)
T COG2270 134 VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLF 212 (438)
T ss_pred eehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHH
Confidence 76 9999999999888888887777777777665544322 1111111100 01111001 223444444444444443
Q ss_pred -HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHh
Q 014686 164 -TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLW 242 (420)
Q Consensus 164 -~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
+-.++..|+.++.. ..+.+...+..+ +...+.+++.+++++...++..+++.-........-..|
T Consensus 213 ~iPm~~~v~~~~~~~---~~~~~~l~~g~k-----------~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~f 278 (438)
T COG2270 213 ALPMILNVHDAEKIS---SPPPTALRNGFK-----------ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVF 278 (438)
T ss_pred HhHHHhccccccccc---ccchHHHHHHHH-----------HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33344444444321 011111111111 112345677778888888888887776666666666666
Q ss_pred hcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 014686 243 ANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNC 322 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
.... +|++..+...+.....+.++++++ +.+++++|++.|+++..+.++..+..+...+... . .-..+
T Consensus 279 g~~~-----~gls~~~lll~g~~~~vvA~lg~i-i~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~--~----~~f~i 346 (438)
T COG2270 279 GAAD-----LGLSSTELLLIGIALSVVAALGAI-IAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG--E----LDFWI 346 (438)
T ss_pred HHHH-----cCccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc--c----HHHHH
Confidence 6655 899999999999999999999988 7889999999999988888777665554433322 1 12334
Q ss_pred HHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHH
Q 014686 323 ASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVV 402 (420)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~ 402 (420)
..++.+.+.+..+....++..+.+|+++.++.+|+++..+...+..||.+.+.+.+.++ +.+..+....++
T Consensus 347 ~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg---------~~r~g~~~i~vl 417 (438)
T COG2270 347 LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG---------SSRAGVLSIIVL 417 (438)
T ss_pred HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc---------chhhHHHHHHHH
Confidence 55566677788899999999999999999999999999999999999999999999985 456677777777
Q ss_pred HHHHHHHHhh
Q 014686 403 EAIGVLMTFK 412 (420)
Q Consensus 403 ~~~~~~~~~~ 412 (420)
..++.+...+
T Consensus 418 l~iGl~~L~~ 427 (438)
T COG2270 418 LLIGLLLLLR 427 (438)
T ss_pred HHhhHhhEEe
Confidence 7777766655
No 112
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.86 E-value=3.6e-18 Score=149.81 Aligned_cols=365 Identities=16% Similarity=0.091 Sum_probs=246.7
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcC-----CchhHHH-HHHHHHHHHHHHhhh-----h---
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIM-GTASVVIFNTLFGLS-----V--- 67 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rk~~l~~-~~~~~~~~~~~~~~~-----~--- 67 (420)
..|++++..- .+...+...+.. ...+.+|..||+.+ ||..+++ +..+...+..+.+++ .
T Consensus 7 IvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~ 79 (403)
T PF03209_consen 7 IVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQ 79 (403)
T ss_pred HHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 3566666666 888888888776 46899999999998 8877654 566666655555442 2
Q ss_pred ----h--HH--HHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccc
Q 014686 68 ----N--FW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 138 (420)
Q Consensus 68 ----~--~~--~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~ 138 (420)
+ .+ ...+.-.+.|+|.+..... .++++|..|+|+|+++.++.....-+|.+++..+.+.+.+. +
T Consensus 80 ~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~-------~ 152 (403)
T PF03209_consen 80 QSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP-------F 152 (403)
T ss_pred ccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-------c
Confidence 1 22 2333456678887777676 99999999999999999999999999999999999998872 1
Q ss_pred cccccccCccchHHHHHHHHHHHH--HHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccch
Q 014686 139 SSESLFGKFPYFLPCLCISLFAFG--VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 216 (420)
Q Consensus 139 gw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (420)
. .-|+..++.....+. .-+...+-.|.+..+..+.++++ +++....++++..+|
T Consensus 153 s--------~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~~~ 208 (403)
T PF03209_consen 153 S--------PERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWASP 208 (403)
T ss_pred C--------HHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHhCC
Confidence 1 122222222222222 22222233333322222111100 111223456677777
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 014686 217 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 296 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (420)
+........++.......-. -.-+|+--+.+|++..+...+....+.+..++-...+..+.++.++++....++.
T Consensus 209 ~a~~f~~fl~l~t~a~~~QD-----~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~ 283 (403)
T PF03209_consen 209 QARRFFVFLFLGTLAFFMQD-----VILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCL 283 (403)
T ss_pred ChhHHHHHHHHHHHHHHhhH-----HHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 77666655555444333332 3334444455999999999999999999888877677777778888888888888
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 297 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
...+++.++.......+ ...+-...++.++..+.......+...+..++++.|..+|.....+.++..++..++|.+
T Consensus 284 ~~~~~f~lii~a~~~~~---~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 284 LGALAFALIILAGPLGS---PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHHHHHHHHhccc---chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888776655443322 223334455566666777777777888888899999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 377 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.|............+|..+|.+=+...+++..+...
T Consensus 361 ~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 361 RDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred HHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 998765443212237888888888887777666554
No 113
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=4.9e-18 Score=155.81 Aligned_cols=331 Identities=21% Similarity=0.288 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccc--hhhh-Hhhhhh
Q 014686 19 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGL--LGPI-KAYACE 95 (420)
Q Consensus 19 g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~--~~~~-~~~i~~ 95 (420)
+.-.....+...+.++..|.++||+|||..+........+..+...+.. |++.+ +.|+..+. .... .++++|
T Consensus 65 ~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 65 GVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred hHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheee
Confidence 3333344678889999999999999999999999999988888877766 33333 66664443 2333 899999
Q ss_pred hchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHH-HHHHHhccccc
Q 014686 96 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 174 (420)
Q Consensus 96 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~~ 174 (420)
...+++|....++.+.....+..++|.+++.+.. ..+...++.+..+..+.. +...+++||+.
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~----------------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK----------------FLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH----------------hcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999999987 344455556666666554 45677889987
Q ss_pred CCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhh-HHHHHHHhhcCcccCCccC
Q 014686 175 HRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMA-YSEIFSLWANSPKKLGGLN 253 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 253 (420)
.+++++....... ...... .+...+........-.+|..+......+........ .......|+..+ ++
T Consensus 204 ~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~-----f~ 273 (463)
T KOG2816|consen 204 QEKERSDATLREL----TPGSLD-SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK-----FG 273 (463)
T ss_pred Ccccccccccccc----CCCccc-chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee-----cC
Confidence 6655431000000 000000 000000111111122233334333333332222111 111222333333 89
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHH
Q 014686 254 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVS 333 (420)
Q Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (420)
+++.+.+.+.+..+....+++++..+.+.+..+.++.+..+...-......+.+....+.. ............
T Consensus 274 w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~-------~~~~v~~~~~~~ 346 (463)
T KOG2816|consen 274 WNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMM-------FAAGVVVALAGI 346 (463)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhh-------hHHHHHHHhhcc
Confidence 9999999999999999999999888999999999998888888888888887776543311 112222234567
Q ss_pred HHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCC
Q 014686 334 IITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS 387 (420)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~ 387 (420)
..|...+..+...+++++|+++++...+..+...++|.+.+.++..+.+...+.
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~~~~ 400 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDLPGF 400 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhcccc
Confidence 788999999999999999999999999999999999999999999988766543
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.9e-17 Score=149.54 Aligned_cols=341 Identities=17% Similarity=0.117 Sum_probs=242.9
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhh----hcCCchh-HHHHHHHHHHHHHHHhhhhh------HHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV-IIMGTASVVIFNTLFGLSVN------FWM 71 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grk~~-l~~~~~~~~~~~~~~~~~~~------~~~ 71 (420)
+.+|+++.. +|.+..+.-+--++.-|+.|.++| |+||+|. ++.+.+..++.+.++-.+++ ...
T Consensus 41 dv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~y 114 (467)
T COG2211 41 DVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIY 114 (467)
T ss_pred cccCCcHHH------HHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHH
Confidence 456778777 899999999999999999999999 4887555 56677888888888877763 455
Q ss_pred HHHHHHHhhhhccchhhh-Hhhhhhhch-hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccc
Q 014686 72 AVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 149 (420)
Q Consensus 72 l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~ 149 (420)
.++.-.+.+++....... .++.+|.++ ++||.+..++-..+.++|..+...+...+... +|-+.. ..+|
T Consensus 115 a~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~-------~g~~~~--~~g~ 185 (467)
T COG2211 115 ALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKL-------FGGGDK--ALGY 185 (467)
T ss_pred HHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCcc--hhhH
Confidence 666678888887765554 788888876 78999999999999999988877777666652 221110 3356
Q ss_pred hHHHHHHHHHHHHHHH-HHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHH
Q 014686 150 FLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 228 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~-~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+....+.++..++..+ +.+-.+|.+.+....++. . +.+.......++|||++...++...+.
T Consensus 186 ~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~---~--------------~~~~~~~~~~~~~Nrp~~~~l~~~l~~ 248 (467)
T COG2211 186 QGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG---V--------------KLKLKDSFLLIFKNRPLLLLLLMNLLL 248 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc---c--------------cccHHHHHHHHHccchHHHHHHHHHHH
Confidence 6655666666655443 344456655422211110 0 111122345688999998888877766
Q ss_pred HhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014686 229 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
........+...+|.... +|.++..............+++.+ ..+.+.+|+|+|+....+.++..++.+.+.+.
T Consensus 249 ~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~~-~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 249 FIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGLI-LWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh
Confidence 666555556666666555 677777777777776666665544 88999999999999999999998888887776
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 309 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
+. ......++...+.+.+.....+..+++++|..+ .+..|...|....+..+|.+++..+.|++.+..+
T Consensus 323 ~~----~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 323 PA----GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred cC----cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 51 223334444455556677778888888888653 4567889999999999999999999999999886
Q ss_pred hccC
Q 014686 382 KRLD 385 (420)
Q Consensus 382 ~~~~ 385 (420)
-..+
T Consensus 399 yv~~ 402 (467)
T COG2211 399 YVPN 402 (467)
T ss_pred CCCC
Confidence 5443
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.81 E-value=2e-18 Score=156.10 Aligned_cols=366 Identities=18% Similarity=0.220 Sum_probs=226.8
Q ss_pred ccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCC-chhHHHHHHHHHHHHHHH-hhh---h-hHHHHHHHHHH
Q 014686 5 FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASVVIFNTLF-GLS---V-NFWMAVLTRFL 78 (420)
Q Consensus 5 ~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-k~~l~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l 78 (420)
.+.+.+. .|++.++..++.+++++..|+++.|.++ |+.++.+.++..++.+++ .+. + ..+.++++|++
T Consensus 66 ~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l 139 (488)
T KOG2325|consen 66 PTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARIL 139 (488)
T ss_pred CCCCcch------hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 4455555 9999999999999999999999999996 899999999999999998 442 3 67899999999
Q ss_pred hhhhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcccccccc--ccCccchHHHHHH
Q 014686 79 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL--FGKFPYFLPCLCI 156 (420)
Q Consensus 79 ~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~--~~~~~~~~~~~~~ 156 (420)
.|+|.|......+|+++....++|.|+++....+..+|.++||.++..+....+ -|++.. ...+.+-.+.++.
T Consensus 140 ~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~-----~G~~i~~~~~~n~YTap~w~m 214 (488)
T KOG2325|consen 140 TGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE-----KGFMILPGLIFNMYTAPAWLM 214 (488)
T ss_pred cCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC-----CceEEcCcceEEecchHHHHH
Confidence 999999998889999999999999999999999999999999999988775332 121110 1023345566667
Q ss_pred HHHHHHH-HHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhH
Q 014686 157 SLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAY 235 (420)
Q Consensus 157 ~~~~~~~-~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (420)
++..++. ++..++++|..+...+++.+++++ .+.++++.+..+.+ .+..+...+..+...+.....
T Consensus 215 ~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d------~~~~~vc~~~~~~~~~~~~~i 281 (488)
T KOG2325|consen 215 AILWIIYIVIILFFFKEVYRGIIDKKKRSVEE-------EKSDIEKVKKPKLD------WVAVLVCIFLRFVVNFIATTI 281 (488)
T ss_pred HHHHHHHHHHHHhheeecccCccccccccchh-------hccchhhhccCChh------HHHHHHHHHHHHHHHHHHHHH
Confidence 7766664 445667788776554332221100 00000000000000 011122222222222222222
Q ss_pred HHHHHHhhcCcccCCccCCchh----hHHHHHHHHHHHHHHHHHHHHHHHH-HhhchHHHHHHHHHHHHHHHH--HHHHH
Q 014686 236 SEIFSLWANSPKKLGGLNYSTQ----MVGEVLAITGFSLLVFQLSLYPFLE-RILGPIMVARIAGVLTIPLLT--SYPYI 308 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~ 308 (420)
.+..+...... ++++.+ ..|...+..++..+...+ ...... .++.+|+.+..+.+....... .+++.
T Consensus 282 et~~~~~~m~~-----y~w~~~~av~~~gi~~~~~g~ls~~~~l-~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~ 355 (488)
T KOG2325|consen 282 ETLSSALTMVM-----YGWTGSEAVLYNGITLSISGILSVILLL-LYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWG 355 (488)
T ss_pred HhccchHHHHH-----hccccchHHHhhhhHHHHHHHHHHHHHH-HHHHHHhhhhccceeeeehHHHHHHhhheeeeecc
Confidence 22222222111 344433 445566665655555544 222222 233444544444333322222 22221
Q ss_pred HHhh------------------------hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHH
Q 014686 309 AMLS------------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSL 364 (420)
Q Consensus 309 ~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 364 (420)
.... ....+..+....+..+...........++.+|...|++++++.|+.......
T Consensus 356 ~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~ 435 (488)
T KOG2325|consen 356 FYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSI 435 (488)
T ss_pred ccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccch
Confidence 1100 0011111222233334444455667888999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 365 FKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 365 g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
+..++|.+...++... |++..+.+..+..++...+.
T Consensus 436 ~~~~~~~~~t~~~~~~----------g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 436 ARVVGPIFSTAIFTLS----------GPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred hhhhhHHHHhhhHHhc----------CccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988 88888888777666665444
No 116
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=1.3e-16 Score=149.57 Aligned_cols=331 Identities=15% Similarity=0.043 Sum_probs=201.9
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh----cCCchhH-HHHHHHHHHHHHHHhhhhh------HHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVI-IMGTASVVIFNTLFGLSVN------FWM 71 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grk~~l-~~~~~~~~~~~~~~~~~~~------~~~ 71 (420)
+.+|+++.. +|.+..+.-+--++.-|+.|.++|| +||||.. +++.+..+++..++...|+ +..
T Consensus 38 ~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 38 DIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 456777777 9999999999999999999999995 7986655 4566777777766654442 344
Q ss_pred HHHHHHHhhhhccchhhh-Hhhhhhhch-hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccc
Q 014686 72 AVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 149 (420)
Q Consensus 72 l~~~r~l~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~ 149 (420)
+.+.-++..++....... .++.+|..+ +|||++..++...+.++|..+++.+...+.+ .+|.+. - ..+|
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~-------~~g~~~-~-~~g~ 182 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN-------LIGGDN-K-PLGF 182 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhCCCc-h-hhhH
Confidence 555666667776665544 888889887 7899999999999999999888888766554 222110 0 2244
Q ss_pred hHHHHHHHHHHHHHHHH-HHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHH
Q 014686 150 FLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 228 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~-~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+....+.++++++.... ....+|.++.++ ++. +.++..+..++||.++......++.
T Consensus 183 ~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~----~~~------------------~~~~~l~~~~~Nk~~~~l~~~~~~~ 240 (460)
T PRK11462 183 QGGIAVLSVVAFMMLAFCFFTTKERVEAPP----TTT------------------SMREDLRDIWQNDQWRIVGLLTIFN 240 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeccCCCc----cCC------------------CHHHHHHHHhCChHHHHHHHHHHHH
Confidence 54444555544443333 333444322110 000 0112356778898887776555555
Q ss_pred HhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 014686 229 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYI 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
............+|.... .+. +...+.+.....+..+++.. +.+++.||+++|+....+.....+....+.+.
T Consensus 241 ~~~~~~~~~~~~y~~~y~-----~g~-~~~~~~~l~~~~i~~iig~~-l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 241 ILAVCVRGGAMMYYVTWI-----LGT-PEVFVAFLTTYCVGNLIGSA-LAKPLTDWKCKVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred HHHHHHHHhHhhhhhhhh-----cCC-hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444443332 332 23344556666777777765 77888888888877665444333322222222
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-------cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 309 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-------QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
+. . .... .....++.+++.....+..+++.+|..+ .+..|...+..+....+|.++++.+.|.+.+..+
T Consensus 314 ~~--~-~~~~-~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 314 PM--Q-ASIT-MFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred ch--h-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 21 1 1111 1122222334444555555667776554 3344666677778899999999999999998753
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=1.2e-16 Score=142.98 Aligned_cols=375 Identities=14% Similarity=0.084 Sum_probs=225.1
Q ss_pred ccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-CCchhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhhh
Q 014686 5 FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGS 81 (420)
Q Consensus 5 ~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~ 81 (420)
+|.++++ ..-+.++|..-.-+...++|+++||+ |+|++++.+.++..++.++.+.+. +...+.++-.+.++
T Consensus 56 Lg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~i 129 (498)
T COG3104 56 LGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIV 129 (498)
T ss_pred CCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHh
Confidence 5588777 66777777776678889999999996 999999999999999999999984 78899999999999
Q ss_pred hccchhhh-Hhhhhhhchhh--hhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
|.|..-|. .++++|.+|++ +|-..+++..++.|+|+.++|.+.+++.+ ..||+..| ...++
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~-------~~g~~~gF---------~~aav 193 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI-------NYGWHVGF---------GLAAV 193 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH-------hhCHHHHH---------HHHHH
Confidence 99999997 99999999854 47788999999999999999999999998 55555444 45555
Q ss_pred HHHHHHHHHHhcccccCCCCCCC----Ccccchh-----------Hhh--hhhhhhh--h--------------hhhcCC
Q 014686 159 FAFGVTIAAFWLPETLHRHNDDD----DSCDVSY-----------DAL--ESASAEV--K--------------EEEGRE 205 (420)
Q Consensus 159 ~~~~~~~~~~~l~e~~~~~~~~~----~~~~~~~-----------~~~--~~~~~~~--~--------------~~~~~~ 205 (420)
-....++.....+..-.....++ ....... ... .....+. . .+.-..
T Consensus 194 Gm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 273 (498)
T COG3104 194 GMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRS 273 (498)
T ss_pred HHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44444444443332222111111 1111100 000 0000000 0 000000
Q ss_pred CCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 014686 206 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER-- 283 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 283 (420)
++...+.-|-.....+.+...++........+.+..|..+....+.+|++ ...+...+.+.+..++.+.+......+
T Consensus 274 ~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~ 352 (498)
T COG3104 274 PKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLG 352 (498)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhh
Confidence 00001100001111222222222222333334444555444333323322 223455555566666665545444444
Q ss_pred hhc--h--HHHHHHHHHHHHHHHHHHHHHHH--h--hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHh
Q 014686 284 ILG--P--IMVARIAGVLTIPLLTSYPYIAM--L--SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAAN 355 (420)
Q Consensus 284 ~~~--~--~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (420)
+.+ + +.-..++..++..+.+++..... . .+.....+++...++.+++.....|...+.+.+..|+...+.++
T Consensus 353 ~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~m 432 (498)
T COG3104 353 RGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIM 432 (498)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHH
Confidence 111 1 22333455555555555444311 1 22234445566667777889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhhhhH------HHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 356 GIAMTGMSLFKAAGPAGGGA------LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 356 g~~~~~~~~g~~~g~~~~g~------l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
+........++.++..+.+. .++.. .....|..++...++..+....
T Consensus 433 a~wfLt~a~~~~l~g~va~~~~~~~~~~~~~----------~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 433 AMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF----------IEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred HHHHHHHHHHHHhhceecccccccchhhhhh----------hhhhhHHHHHHHHHHHHHHHHH
Confidence 98888888888777777663 22222 4556777777776666555443
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.73 E-value=2.7e-19 Score=168.40 Aligned_cols=368 Identities=17% Similarity=0.198 Sum_probs=3.0
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-------------
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV------------- 67 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~------------- 67 (420)
|+++|+++.+| .|++.+.+-++..+..++..++.+|..|-|.+-.+.++++++++++++-+
T Consensus 29 iErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 29 IERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 57899999999 99999999999999999999999998888888899999999999876620
Q ss_pred -------------------------------------hHHHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHH
Q 014686 68 -------------------------------------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV 109 (420)
Q Consensus 68 -------------------------------------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~ 109 (420)
-+..++++.++.|+|....++. .+|+-|..++++-+..+|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 1356788899999999999998 99999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhHhccccccCCcc-------ccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCCCCC
Q 014686 110 STAWGIGLIIGPALGGFLAQPAEKYPNL-------FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDD 182 (420)
Q Consensus 110 ~~~~~~g~~~g~~l~~~l~~~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~ 182 (420)
.....+|.++|-++++.+......+... -..+.-| -..||+-+++.+...++..+..+.+|+..+..++.++
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~ 261 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQE 261 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccc
Confidence 9999999999999999887632222111 1111222 3457777777877777766666777766554411111
Q ss_pred cccc----hhHhhhhhhhhhh------hhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCcc
Q 014686 183 SCDV----SYDALESASAEVK------EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGL 252 (420)
Q Consensus 183 ~~~~----~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
+++. ..+..++...+.+ +..+.-....+++++||.+....+..........++.++.|-|+... +
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~Q-----F 336 (539)
T PF03137_consen 262 EKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQ-----F 336 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h
Confidence 1110 0000000000110 11223345678899999999999988888888888888888777665 8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHH---HHHH--HH--------hh-----
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS---YPYI--AM--------LS----- 312 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~--~~--------~~----- 312 (420)
+.++.+++.+.....+.....+.++++++.||++ .|.......+...+..+. ..+. +. ..
T Consensus 337 ~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~ 416 (539)
T PF03137_consen 337 GLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTS 416 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccC
Confidence 9999999888877777666666778899988865 344444444433333322 1110 00 00
Q ss_pred -----------------------------h-hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH
Q 014686 313 -----------------------------G-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 362 (420)
Q Consensus 313 -----------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 362 (420)
. ...+..+.+..++..+.............-+.+|+++|+.+.|+...+.
T Consensus 417 ~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~ 496 (539)
T PF03137_consen 417 SSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLII 496 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHH
Confidence 0 0112222222222223333333333444557799999999999988665
Q ss_pred -HHHHHHhhhhhhHHHHhh
Q 014686 363 -SLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 363 -~~g~~~g~~~~g~l~~~~ 380 (420)
-+|.+-||.+.|.+.|..
T Consensus 497 rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 497 RLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -------------------
T ss_pred HhhcCcchHHHHhHHHhhh
Confidence 678899999999999975
No 119
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=3e-16 Score=138.06 Aligned_cols=332 Identities=12% Similarity=0.053 Sum_probs=221.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh------hHH--HHHHHHHHhhhhccchhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI 89 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~ 89 (420)
.-|+.-+|.+.+....+++-|+.|++|-|...+++..+..+++.+-..+. .++ ....+..+.+.++-.....
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~l 160 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGL 160 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcc
Confidence 55888899999999999999999999999999999999999999887653 334 5556667766666555555
Q ss_pred -HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHH-HHHHH
Q 014686 90 -KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAA 167 (420)
Q Consensus 90 -~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 167 (420)
.....-|++++||..+..+-.++..+|.++|.++...+..+....+ ...|. ....++.....+.+ ..+..
T Consensus 161 PskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~-~~~~~-------~~~~f~~~~~l~~l~l~l~~ 232 (480)
T KOG2563|consen 161 PSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSE-DNSWL-------FFTLFLGVECLAALLLALVL 232 (480)
T ss_pred ccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcc-hhHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 5677789999999999999999999999999999988887431100 11111 11123323333333 22333
Q ss_pred HhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcc
Q 014686 168 FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 247 (420)
Q Consensus 168 ~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
+..+|.|+..+........ +.+-.+..++.++|+++....+++........+..+.+..-+
T Consensus 233 ~~~~~~P~tPps~s~~~~~---------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l---- 293 (480)
T KOG2563|consen 233 FVFTKKPPTPPSASQAALQ---------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLAL---- 293 (480)
T ss_pred HhcCCCCCCCCchhHhhhh---------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcc----
Confidence 4444444333221111000 111345678899999999888888776555444433332111
Q ss_pred cCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 014686 248 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 327 (420)
Q Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (420)
.. .|++...+|.......+.+++++...+.+.||+.+-|...........++...+....... ...++++......
T Consensus 294 ~~--sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~--~~~viv~~t~~~~ 369 (480)
T KOG2563|consen 294 CP--SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFL--GDSVIVFTTCGLL 369 (480)
T ss_pred cc--ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccC--CceEehhhhHHHH
Confidence 11 4667688888888888999999885555555543445555544444444433322222222 2233455556666
Q ss_pred HhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 328 NLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
+++..+..|...-+..|..-|..-++..|+.+..+++-+.+-..+.+...+..
T Consensus 370 g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 370 GFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred HHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 77788888888888888888888999999999999999988888887777655
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.61 E-value=7.7e-14 Score=129.28 Aligned_cols=376 Identities=15% Similarity=0.187 Sum_probs=218.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcC-----CchhHHHHHHHHHHHHHHHhhh----hhHHHH
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMGTASVVIFNTLFGLS----VNFWMA 72 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rk~~l~~~~~~~~~~~~~~~~~----~~~~~l 72 (420)
++++|+++.| .....+...+... ..++.|.++|.+. ||+-++++.++..++.+..+.. .+....
T Consensus 17 ~~~l~ls~~~------~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 17 KDDLGLSPAQ------LQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHcCCCHHH------HHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 5789999999 8888888888774 4578999999763 4555566777776666655553 345666
Q ss_pred HHHHHHhhhhccchhhh-Hhhhhhhch--hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccc
Q 014686 73 VLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 149 (420)
Q Consensus 73 ~~~r~l~G~~~g~~~~~-~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~ 149 (420)
.+.-++..+|......+ -+++.|... +++|+...+.......+|.+++..++|.+.+ ..+.+..|
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~~f----- 157 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQGVF----- 157 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeEEe-----
Confidence 66667777787777776 888888874 3447888888889999999999999999988 45555544
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCc--ccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHH-HHH
Q 014686 150 FLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDS--CDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII-VYC 226 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 226 (420)
.+.+....+..+..++++|+++..++.+.. .++..+..... .++.....++.+++|.++...+ ..+
T Consensus 158 ----~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~i~~~~~~~~~ 226 (433)
T PF03092_consen 158 ----LISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGS-------FREQLSELWRALQQRAIWQPILFFIF 226 (433)
T ss_pred ----hHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHH-------HHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 444444444433333343332221111100 00000000000 0111223456677777776666 333
Q ss_pred HHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Q 014686 227 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 306 (420)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
+.......... -..|..... ..+.++++...+.+..+..++.+.+......++.+ ..-|+++....++..+..+.-.
T Consensus 227 ~~~~~~~~~~a-~~fy~~~~~-~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~ 303 (433)
T PF03092_consen 227 FFNLPPSISSA-SSFYFQTDA-LGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDL 303 (433)
T ss_pred HHHhccCCCCc-cEEEEEecc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccE
Confidence 22222111111 011221111 11345899999988877677777776634444444 4666666655554443322211
Q ss_pred HH-HHh---hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhh
Q 014686 307 YI-AML---SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 382 (420)
Q Consensus 307 ~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 382 (420)
.. ... .+.........-..+.......-.-....+.+|+.|+...|+.+++...+.++|..++..++..+.+..+.
T Consensus 304 ~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~v 383 (433)
T PF03092_consen 304 LLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGV 383 (433)
T ss_pred EEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11 000 00000011111222222333344445556788999999999999999999999999999999999998864
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 383 RLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 383 ~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
..+. ..+.....++..++.++...+...
T Consensus 384 t~~~--f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 384 TRDD--FSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred Cccc--ccchHHHHHHHHHHHHHHHHHHHH
Confidence 3322 124555666666666665555433
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.60 E-value=5.7e-15 Score=115.40 Aligned_cols=108 Identities=32% Similarity=0.582 Sum_probs=100.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhhchhh
Q 014686 22 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE 100 (420)
Q Consensus 22 ~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~ 100 (420)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+. ..++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 45567888999999999999999999999999999999998888999999999999999998888887 89999999999
Q ss_pred hhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 101 HQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 101 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
+|++.+++.+....+|..++|.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 99999999999999999999999999987
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.57 E-value=8.9e-13 Score=114.35 Aligned_cols=245 Identities=16% Similarity=0.142 Sum_probs=151.8
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+++|.++.| ++.+....+...++..++.|.++||+|||+.-+..+++.+++++ .-..++++.++++|++.|++
T Consensus 62 ~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGia 134 (354)
T PF05631_consen 62 ESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIA 134 (354)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHH
Confidence 568899999 99999999999999999999999999999999999999998886 44668999999999999999
Q ss_pred ccchhhh-Hh-hhhhhch----hhhhhhHHHHHH-HHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHH
Q 014686 83 NGLLGPI-KA-YACEIFR----EEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLC 155 (420)
Q Consensus 83 ~g~~~~~-~~-~i~~~~~----~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~ 155 (420)
......+ .+ ++.|.-. ++..+..++... ..+++-.+++..++.++.+ ..+ .+...|+..
T Consensus 135 TSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~-------~~~-------~g~vaPF~~ 200 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD-------WFG-------FGPVAPFDA 200 (354)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH-------HhC-------CCCcchHHH
Confidence 9988776 55 4566532 232333333333 2333344445555555554 111 122444555
Q ss_pred HHHHHHHHHHH-HHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhh
Q 014686 156 ISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMA 234 (420)
Q Consensus 156 ~~~~~~~~~~~-~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
.....++..+. ...-+|+..+..++++..+. .....+.+.+||+++..-+...++-.....
T Consensus 201 a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------------~~~a~~~i~~d~ril~LG~~qslFE~smy~ 262 (354)
T PF05631_consen 201 AIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------------FREAWRAILSDPRILLLGLIQSLFEGSMYL 262 (354)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccccchHHH------------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 55544443333 33334543322211111111 112346677889888777766665443332
Q ss_pred HHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHH
Q 014686 235 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 293 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (420)
+ .++..|.... +-+....|++++...+..++|+.+......++......+..
T Consensus 263 F-----VflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~ 314 (354)
T PF05631_consen 263 F-----VFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRY 314 (354)
T ss_pred h-----eeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 2 2333333221 11233478999998899999988554566665444443333
No 123
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=3.5e-14 Score=134.07 Aligned_cols=368 Identities=16% Similarity=0.172 Sum_probs=265.7
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-------------
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV------------- 67 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~------------- 67 (420)
|.+.|+++.++ .|++.+.+-++..+...+..+...|.-|-|.+-.++++++++++++++-+
T Consensus 123 iErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 123 IERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 46789999999 99999999999999999999999999999999999999999999987630
Q ss_pred ------h--------------------------------H-HHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHH
Q 014686 68 ------N--------------------------------F-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLS 107 (420)
Q Consensus 68 ------~--------------------------------~-~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~ 107 (420)
+ + ..++++.++.|+|.....+. .+|+-|...+++-+..+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 2 25677899999999999998 999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhHhccccccC-C--ccc-cccccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCc
Q 014686 108 TVSTAWGIGLIIGPALGGFLAQPAEKY-P--NLF-SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDS 183 (420)
Q Consensus 108 ~~~~~~~~g~~~g~~l~~~l~~~~~~~-~--~~~-gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~ 183 (420)
++.....+|.++|-++++++......+ . ... .-+.-| -..||+-+++.+.+.+...+..+++|++.+...++.+.
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~ 355 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRA 355 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchh
Confidence 999999999999999999988643222 0 011 111223 45688888899888888888888888877654332111
Q ss_pred ccchhHhhhhh--hhhhh--hhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhH
Q 014686 184 CDVSYDALESA--SAEVK--EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 259 (420)
Q Consensus 184 ~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
.+......++. +++.. .+-++-+...+++++||.+...++...+......++.++.|=|+.+. ++.++..+
T Consensus 356 ~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Q-----fg~sas~A 430 (735)
T KOG3626|consen 356 RDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQ-----FGISASLA 430 (735)
T ss_pred hhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHH-----cCCCHHHH
Confidence 11000000000 00000 01122345677899999999999999999999999999999888766 89999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHHHHHHHHH----------------------h-h--
Q 014686 260 GEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAM----------------------L-S-- 312 (420)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~-- 312 (420)
..+....++.....++++++++.||++ .|.......+...+.++.+..... . .
T Consensus 431 n~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~ 510 (735)
T KOG3626|consen 431 NILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENP 510 (735)
T ss_pred HHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCc
Confidence 999988898888888889999999865 355555554444444443211100 0 0
Q ss_pred ----------------------------------------h-------------------------------hHHHHHHH
Q 014686 313 ----------------------------------------G-------------------------------FGLAFLLN 321 (420)
Q Consensus 313 ----------------------------------------~-------------------------------~~~~~~~~ 321 (420)
. ......++
T Consensus 511 ~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl 590 (735)
T KOG3626|consen 511 FSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFL 590 (735)
T ss_pred hhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHH
Confidence 0 00122233
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH-HHHHHHhhhhhhHHHHhh
Q 014686 322 CASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~g~l~~~~ 380 (420)
+...+..+......+....++-+.+|+++|..+.|+..++. -+|.+-+|++.|++.|..
T Consensus 591 ~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 591 ALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred HHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 33333334444444555666677899999999999987664 788899999999999963
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=8.7e-14 Score=135.42 Aligned_cols=141 Identities=14% Similarity=0.092 Sum_probs=118.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
..+...+..++..++.++.|+++||+|||++++.+.++.+++.++.+++++...+++.+++.|++.+...+. .++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567778999999999999999999999999999999999999999998888888899988877766676 8999999
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccC
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 175 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~ 175 (420)
+|.++|++++|+......+|.++||.+++.+.+. ....++++.++..++..++..++||+..
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-----------------~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-----------------TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999999999988751 1234455566655665566667788654
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.55 E-value=1.1e-13 Score=131.65 Aligned_cols=155 Identities=15% Similarity=0.235 Sum_probs=112.6
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL---FGLSVNFWMAVLTRFLL 79 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~ 79 (420)
+++|.+..+ .++..+...++..++.+..|+++||+|||+++..+.++..+.... ...+++...++++|++.
T Consensus 279 ~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (490)
T PRK10642 279 HNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLML 352 (490)
T ss_pred HhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 456777666 777888889999999999999999999999988877654433322 22345677888889999
Q ss_pred hhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHH
Q 014686 80 GSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISL 158 (420)
Q Consensus 80 G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~ 158 (420)
|++.+..... ..++.|.+|++.|+++++.......++..++|.+.+++.+. . ..|+.+.....+
T Consensus 353 g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~-------~--------~~~~~~~~~~~~ 417 (490)
T PRK10642 353 AVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES-------T--------QNLMMPAYYLMV 417 (490)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------h--------CCchHHHHHHHH
Confidence 8876665554 77888999999999999975544556677899999888761 1 123344444555
Q ss_pred HHHHHHHHHHhcccccCCCC
Q 014686 159 FAFGVTIAAFWLPETLHRHN 178 (420)
Q Consensus 159 ~~~~~~~~~~~l~e~~~~~~ 178 (420)
.+++.++..+++||+|++..
T Consensus 418 ~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 418 VAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHhccccCCCC
Confidence 55555566677899988754
No 126
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.53 E-value=1.4e-13 Score=127.80 Aligned_cols=149 Identities=13% Similarity=0.188 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHhhhhccchhhh-Hhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAY 92 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~-~~~ 92 (420)
.+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+. ..+
T Consensus 253 ~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~ 332 (418)
T TIGR00889 253 ASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVF 332 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999988877666632 3466778899999998888777 889
Q ss_pred hhhhchhhhhhhHHHHHH-HHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHH-HHHHHHhc
Q 014686 93 ACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWL 170 (420)
Q Consensus 93 i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l 170 (420)
+.|++|+++|++++++.+ ...++|.++||+++|.+.+..++. ..+||+..| ...++..++ .++..+++
T Consensus 333 i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~-~~~~~~~~f---------~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 333 VEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY-GTFDWQTMW---------LFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-cCCchHHHH---------HHHHHHHHHHHHHHHHHh
Confidence 999999999999999997 678999999999999999832100 013454444 555554444 44556677
Q ss_pred ccccCC
Q 014686 171 PETLHR 176 (420)
Q Consensus 171 ~e~~~~ 176 (420)
||+.+.
T Consensus 403 ~~~~~~ 408 (418)
T TIGR00889 403 KYSHNA 408 (418)
T ss_pred CCcccC
Confidence 776443
No 127
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.51 E-value=9.7e-11 Score=104.71 Aligned_cols=341 Identities=14% Similarity=0.088 Sum_probs=210.5
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
+.|+|++|- ..-+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+..++-|++.
T Consensus 34 ~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~ 108 (412)
T PF01770_consen 34 DKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLAT 108 (412)
T ss_pred ccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH
Confidence 367777762 234555566677788899999999999999999999999999999999999999999999999988
Q ss_pred cchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHH
Q 014686 84 GLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV 163 (420)
Q Consensus 84 g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
+.-..-.+++-...|+++-.++.+...++.-+|..++..+|-.+.. ++..+++..+.+......+.
T Consensus 109 a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs--------------~~~~sy~~L~~isl~~~~~a 174 (412)
T PF01770_consen 109 AAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS--------------FGGVSYFQLNYISLASVSLA 174 (412)
T ss_pred HHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hcCCCHHHHHHHHHHHHHHH
Confidence 8755558999999999999999999999999999999999988886 22444555555555555556
Q ss_pred HHHHHhcccccCCC---CCCCCccc---chhHhhhhhhhh---hhhhhcCC-----------CCchhhhccchhHHHHHH
Q 014686 164 TIAAFWLPETLHRH---NDDDDSCD---VSYDALESASAE---VKEEEGRE-----------ATPKKSLLKNWPLMSSII 223 (420)
Q Consensus 164 ~~~~~~l~e~~~~~---~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 223 (420)
.+..+++|..++.. ++.+++.+ ...+..++..++ .+++++.. ....++..+||.++.-.+
T Consensus 175 ~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSl 254 (412)
T PF01770_consen 175 LLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSL 254 (412)
T ss_pred HHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 66678888766532 11111000 000000000000 00000000 123344566777766665
Q ss_pred HHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014686 224 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
-+.+.........++....-.+. ...+-+....|.+-+...+.+.++.+ ..+.+..+..+...+.++......+.+
T Consensus 255 WWa~atcgy~qv~nYvQ~LW~~v---~~~~~~~vYNG~VeA~~tllgA~~al-~~g~v~~~w~~~~~l~l~~~S~l~a~~ 330 (412)
T PF01770_consen 255 WWAFATCGYYQVINYVQSLWDTV---PPSDNESVYNGAVEAASTLLGAIAAL-LAGYVKVNWDRWGELALGVFSLLQAGL 330 (412)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhc---CCCCCCcccchHHHHHHHHHHHHHHH-HHhHhhcchHHHHHHHHHHHHHHHHHH
Confidence 55555444443333332222111 11233344456666666777777766 556665555554444444333332322
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhh
Q 014686 304 SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 371 (420)
++.. ... ...++..+..++.........+....-++.....+.-|..+|+++.+..+-+.+-..
T Consensus 331 L~lm-~~t---~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT~ 394 (412)
T PF01770_consen 331 LFLM-SFT---GNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTILTL 394 (412)
T ss_pred HHHH-HHh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheEE
Confidence 2222 111 122334444444445556667777777777788899999999988777666554443
No 128
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=4.5e-12 Score=117.07 Aligned_cols=173 Identities=12% Similarity=0.101 Sum_probs=130.3
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 014686 216 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (420)
|.++...+..++..........+++.|+.+. +|++..++|...+...+...+.++ ..+++.||+++|+.+..+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~-----~g~s~~~~g~~~s~~~~~~~~~~~-~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQ-----YSLSVDLIGYAMTIALTIGVVFSL-GFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCcchhHHHHH
Confidence 3456666666766666666677788777655 899999999999999999998887 6778888899999988888
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhH
Q 014686 296 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 375 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 375 (420)
....++.+.+.+.++ .+. ......+.+.......+.......|..|+++|+++.|+.+...++|..++|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~-----~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 81 TAFASGFIAIPLVNN-----VTL-VVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHHHhH-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666555432 111 11222223334445567788888999999999999999999999999999999998
Q ss_pred HHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 376 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 376 l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
+.+ . +|+..|.+.+++.+++.++..
T Consensus 155 l~~-~----------g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 155 LVM-Q----------SINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHH-h----------ccCcHHHHHHHHHHHHHHHHH
Confidence 875 4 688899988877777655443
No 129
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.45 E-value=2.4e-11 Score=108.08 Aligned_cols=176 Identities=18% Similarity=0.163 Sum_probs=147.1
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 014686 217 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 296 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (420)
.++...++.+......+.....+|...++ +|.+..++|...+.++.+..++.+ ....+.+|++||+++.....
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~d------l~vs~~~aG~lis~yAl~~ai~ap-~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAAD------LGVSEGAAGQLITAYALGVALGAP-LLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHcccchHHHHHHHHH
Confidence 44555666666666666666666655544 799999999999999999999999 55566677799999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 297 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
+..++.++..+.++. ..+.+.=++.+...+.+.+.......+++||++|+++.++..+-..++..+|.+++.++
T Consensus 87 lFi~~n~l~alAp~f------~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i 160 (394)
T COG2814 87 LFIVSNLLSALAPSF------AVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL 160 (394)
T ss_pred HHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence 999988887776542 24556666677778889999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 014686 377 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLA 416 (420)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 416 (420)
-|.. |||..|+..+.+.++..+..+. ..|
T Consensus 161 g~~~----------GWR~~F~~ia~l~ll~~~~~~~-~lP 189 (394)
T COG2814 161 GQLF----------GWRATFLAIAVLALLALLLLWK-LLP 189 (394)
T ss_pred HHHh----------hHHHHHHHHHHHHHHHHHHHHH-hCC
Confidence 9999 9999999999999999888877 666
No 130
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=4.1e-13 Score=125.36 Aligned_cols=141 Identities=18% Similarity=0.140 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999888999999999999999999988777665 8899999
Q ss_pred chhhhhhhHHHH-HHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHH-HHHHHhccccc
Q 014686 97 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETL 174 (420)
Q Consensus 97 ~~~~~r~~~~~~-~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~e~~ 174 (420)
+|++.|++..+. .+....+|.+++|.+.|++.+ .+||+..| ...++..++. ++..+.+++++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~-------~~G~~~~f---------~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD-------SIGFQGTY---------LILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH-------hhCchHHH---------HHHHHHHHHHHHHHHHHhcCCc
Confidence 999999887665 677888999999999999998 55555444 5555544443 33344444433
No 131
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=9.5e-13 Score=121.67 Aligned_cols=148 Identities=15% Similarity=0.210 Sum_probs=116.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
++++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++.++
T Consensus 244 ~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 244 INELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3567888878 8888888888888899999999999999998887776666555555567788888889999888
Q ss_pred hccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 82 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 82 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
+.|...+. ..+..|..|+ +|++++++.+...++|..++|.+++.+.+ .+||+ ..+....+..
T Consensus 318 ~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~-------~~g~~---------~~~~~~~~~~ 380 (393)
T PRK15011 318 YIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE-------IWNYH---------AVFWFALVMI 380 (393)
T ss_pred HHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhH---------HHHHHHHHHH
Confidence 77776665 7778888875 59999999999999999999999999998 44444 4445666666
Q ss_pred HHHHHHHHhccc
Q 014686 161 FGVTIAAFWLPE 172 (420)
Q Consensus 161 ~~~~~~~~~l~e 172 (420)
++..+..++.||
T Consensus 381 ~~~~~~~~~~~~ 392 (393)
T PRK15011 381 IATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHhhcC
Confidence 666666666664
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.44 E-value=2e-12 Score=119.92 Aligned_cols=140 Identities=21% Similarity=0.182 Sum_probs=115.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+.+++.+++.|++.+...+. ...+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 330 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKR 330 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 566677888899999999999999999999999998888888888888888888888999999998887776 7778899
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccc
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 173 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~ 173 (420)
.|+++|+++.++++....+|..++|++.+.+.+ ..||+ ..+...++..++..+..+.++++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-------~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 331 VPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS-------WFGYP---------SIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCHH---------HHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999987 44444 44455555555555444555443
No 133
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.44 E-value=2.3e-11 Score=112.57 Aligned_cols=170 Identities=14% Similarity=0.045 Sum_probs=128.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014686 220 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (420)
......++............+.|+.+. .|+++.+.|...+...+.....++ ..+.+.||+++|+.+..+.....
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~gl~~~~~~l~~~~~~~-~~G~l~dr~g~k~~l~~~~~~~~ 87 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQ-----LGWAAVMVGIALGLRQFIQQGLGI-FGGAIADRFGAKPMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHh-hhhHHHHHhCchHHHHHHHHHHH
Confidence 334445555555555556666666544 799999999999998888888877 67888888999999999988888
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 300 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
++.+.....++ .+ .+.+...+.+.......|...+.+.+..|+++|+++.|+.+...++|..+||.+.|.+. .
T Consensus 88 ~~~~~~~~~~~-----~~-~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~ 160 (400)
T PRK11646 88 AGFATMAIAHE-----PW-LLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q 160 (400)
T ss_pred HHHHHHHHhcc-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 87776654321 12 23333444455555667888888999999999999999999999999999999999998 4
Q ss_pred hhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 380 AQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 380 ~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
. +|+..|++.+.+.++..++...
T Consensus 161 ~----------g~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 161 Y----------DFRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred h----------hHHHHHHHHHHHHHHHHHHHHH
Confidence 4 7999999888777766554433
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=1.5e-12 Score=121.39 Aligned_cols=151 Identities=19% Similarity=0.138 Sum_probs=122.7
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
.+|.++.+ .|++.+...++..++.++.+++.||.++|+.+..+..+..++.++..+.++.+.+.++.++.|++.
T Consensus 253 ~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (417)
T PRK10489 253 VWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS 326 (417)
T ss_pred ccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 37778778 999999999999999999999999988888888888888888888888888888888899999988
Q ss_pred cchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH-
Q 014686 84 GLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF- 161 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~- 161 (420)
+...+. .+++.|..|+++|++++++......+|..+||.+.|.+.+ ..|.+ ..+...+...+
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~-------~~g~~---------~~~~~~~~~~~~ 390 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA-------MMTPV---------ASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH-------Hhchh---------hHHHHHHHHHHH
Confidence 877776 7899999999999999999999999999999999999998 33333 33344443333
Q ss_pred HHHHHHHhcccccCC
Q 014686 162 GVTIAAFWLPETLHR 176 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~ 176 (420)
+..+....+||.++.
T Consensus 391 ~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 391 IGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHhccccccc
Confidence 344555666766543
No 135
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.42 E-value=9.3e-12 Score=116.60 Aligned_cols=167 Identities=13% Similarity=0.041 Sum_probs=122.1
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014686 221 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
..+.+++.......+....|.+.. ++|++..+.+.+.+...++..++++ ..+++.||+|+|+.+..+.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~------~~g~s~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLA------DLGLSRSDIGLLATLFYITYGVSKF-VSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHh-hhhHHHhhcCCchhHHHHHHHHHH
Confidence 333344333333344444554443 3799999999999999999999988 778888889999999888888877
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 301 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
+.+......+. + .+....++.++......+....++++.+|+++|++++|+.+....+|..++|.+.+.+.+..
T Consensus 101 ~~~~~~~~~~~-----~-~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 101 INILFGFSSSL-----W-AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHhHH-----H-HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 77666554321 1 12222233334444556777888999999999999999999999999999999999999876
Q ss_pred hhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 381 QKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 381 ~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
+|+..|.+.+++.++..++.
T Consensus 175 ----------gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 175 ----------GWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred ----------cHHHHHHHHHHHHHHHHHHH
Confidence 89999998887766554433
No 136
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=3e-11 Score=110.59 Aligned_cols=171 Identities=16% Similarity=0.157 Sum_probs=129.2
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014686 223 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
...++............|.|..+ .+.++.+.+...+...++..++++ ..+++.||+|||+.+..+..+..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~------~~~s~~~~g~~~~~~~~~~~i~~~-~~G~l~dr~g~r~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLA------GTGSASVLSLAALAGMLPYVVLSP-IAGALADRYDRKKVMIGADLIRAVLV 78 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------hhccHHHHHHHHHHHHHHHHHHHH-hhhHHHHhhchhHHHHHHHHHHHHHH
Confidence 34444444445555566666543 578899999999999999999987 67788888999999998888777666
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhh
Q 014686 303 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQK 382 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~ 382 (420)
........... .....+.+...+.+.......+...++..|..|+++|+++.|..+....+|..++|.+.+.+.+..
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-- 155 (365)
T TIGR00900 79 AVLPFVALLGG-LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-- 155 (365)
T ss_pred HHHHHHHHcCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 66555432111 122234444555566777788889999999999999999999999999999999999999999887
Q ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 383 RLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 383 ~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
+|+..|++.++..+++.+...
T Consensus 156 --------g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 156 --------GIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHH
Confidence 899999888776666655443
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.42 E-value=2.8e-12 Score=116.69 Aligned_cols=141 Identities=23% Similarity=0.308 Sum_probs=123.4
Q ss_pred ccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCch-hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 5 FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 5 ~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
+|.++.+ .++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+.+.+..++.|++.
T Consensus 206 ~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 279 (352)
T cd06174 206 LGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGL 279 (352)
T ss_pred cCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4677777 999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHH
Q 014686 84 GLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG 162 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 162 (420)
+...+. ..++.|..|+|+|++.+++.+...++|..++|.+.+.+.+ ..+|+ ..+...++..++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-------~~~~~---------~~~~~~~~~~~i 343 (352)
T cd06174 280 GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-------TGGYG---------GVFLILAALALL 343 (352)
T ss_pred hccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------ccCcc---------hHHHHHHHHHHH
Confidence 988887 9999999999999999999999999999999999999998 34444 334566665555
Q ss_pred HHHHH
Q 014686 163 VTIAA 167 (420)
Q Consensus 163 ~~~~~ 167 (420)
..+..
T Consensus 344 ~~i~~ 348 (352)
T cd06174 344 AALLL 348 (352)
T ss_pred HHHHh
Confidence 44433
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=5e-12 Score=117.64 Aligned_cols=121 Identities=21% Similarity=0.281 Sum_probs=107.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
++.|.++.+ .+.+.+...++..++.++.|+++||+|||+.+..+.+...++.+.....++.+.+.+.-++.|++
T Consensus 248 ~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (406)
T PRK11551 248 VGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLF 321 (406)
T ss_pred HhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 456778888 89999999999999999999999999999999888777777777777778888888888888887
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.+...+. .+++.|.+|+++|+++.++.+....+|..+||.+++.+.+
T Consensus 322 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 322 VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 6666666 8899999999999999999999999999999999999987
No 139
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=4.1e-12 Score=116.86 Aligned_cols=147 Identities=15% Similarity=0.274 Sum_probs=116.4
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+++|.++.+ .+++.+.......++.++.|++.||+|||+++..+.++..+........++.+.+.+.+++.|++
T Consensus 228 ~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 228 HELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788877 88888888777888899999999999999999888777766666666778888888889999998
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHH
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 161 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 161 (420)
.+...+. ..++.|..|+ +|++++++.+...++|..++|.+++.+.+ ..||+ ..+...++..+
T Consensus 302 ~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~-------~~g~~---------~~~~~~~~~~~ 364 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE-------RWSYH---------AVYWFAIVMLI 364 (375)
T ss_pred HHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hccch---------hHHHHHHHHHH
Confidence 8877776 7888898875 56799999999999999999999999988 44444 33456666555
Q ss_pred HHHHHHHhccc
Q 014686 162 GVTIAAFWLPE 172 (420)
Q Consensus 162 ~~~~~~~~l~e 172 (420)
+..+...+++|
T Consensus 365 ~~~~~~~~~~~ 375 (375)
T TIGR00899 365 VALFCLLLIKD 375 (375)
T ss_pred HHHHHHheecC
Confidence 55555555543
No 140
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.39 E-value=1e-10 Score=108.12 Aligned_cols=146 Identities=16% Similarity=0.084 Sum_probs=117.5
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++|.++.+.+...+...+...++++ ..+.+.||+|||+.+..+..+..++.+.....++ ...+.+.-++.+.
T Consensus 48 ~~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~ 120 (394)
T PRK10213 48 QDLGISEGVAGQSVTVTAFVAMFASL-FITQTIQATDRRYVVILFAVLLTLSCLLVSFANS------FSLLLIGRACLGL 120 (394)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHCh------HHHHHHHHHHHHH
Confidence 34799999999999999999999888 5567888899999999999888877666544321 2223344455566
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
......+....++.|.+|+++|+++.++.....+++..++|.+.+.+.+.. +|+..|++.+.+.++..+.
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI----------GWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CHHHHHHHHHHHHHHHHHH
Confidence 667778888999999999999999999999999999999999999999887 8999999988777665544
Q ss_pred Hhh
Q 014686 410 TFK 412 (420)
Q Consensus 410 ~~~ 412 (420)
...
T Consensus 191 ~~~ 193 (394)
T PRK10213 191 IIK 193 (394)
T ss_pred HHH
Confidence 433
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=7.6e-11 Score=109.02 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=117.2
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++|.++.+.+...+...+...++++ ..+.+.||+|||+.+..+..+..++.+...+.++ ...+.+..+..+.
T Consensus 37 ~~~~~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~ 109 (390)
T PRK03545 37 QSFHMQTAQVGLMLTIYAWVVALMSL-PLMLLTSNVERRKLLIGLFVLFIASHVLSALAWN------FTVLLISRIGIAF 109 (390)
T ss_pred hHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHH
Confidence 44899999999999998888888887 4568888999999999998888777766655432 1123333344455
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
......+...++..+..|+++|+++.|+......+|..++|.+.+.+.+.. ||+..|++.+++.++..+.
T Consensus 110 ~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~~~~l~~~~ 179 (390)
T PRK03545 110 AHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL----------GWRTTFLAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh----------cHHHHHHHHHHHHHHHHHH
Confidence 556667888889999999999999999999999999999999999999887 8999999998887777655
Q ss_pred Hhh
Q 014686 410 TFK 412 (420)
Q Consensus 410 ~~~ 412 (420)
.+.
T Consensus 180 ~~~ 182 (390)
T PRK03545 180 LIK 182 (390)
T ss_pred HHH
Confidence 544
No 142
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.38 E-value=5.6e-11 Score=109.52 Aligned_cols=178 Identities=10% Similarity=0.096 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 014686 216 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (420)
+.++......+.............|.+.. ++|.+..+.+...+...++..++++ ..+++.||+|||+.+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~g~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~ 75 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAH------DVGISIPAAGHMISYYALGVVVGAP-IIALFSSRYSLKHILLFLV 75 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHH------HcCCCHHHHhHHHHHHHHHHHHHHH-HHHHHHccCccHHHHHHHH
Confidence 34455555555555554555555554432 3799999999999999999999988 7777888889999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhH
Q 014686 296 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 375 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 375 (420)
.+..++.+.....++ ...+.+..++.+.......+.......+..|+++|+++.+.......++..++|.+.+.
T Consensus 76 ~~~~~~~~l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 76 ALCVIGNAMFTLSSS------YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHHHHhCc------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 888877776655432 12233444555555566667777888898999999999999999999999999999999
Q ss_pred HHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 014686 376 LFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 376 l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
+.+.. +|+..|.+.+.+.++..+..+. ..||
T Consensus 150 l~~~~----------gwr~~f~~~~~~~~~~~~~~~~-~lp~ 180 (382)
T PRK10091 150 LSQEF----------SWRYTFLLIAVFNIAVLASIYF-WVPD 180 (382)
T ss_pred Hhhhc----------cHHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 98876 8999999988877766655444 4444
No 143
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.38 E-value=8.1e-11 Score=109.39 Aligned_cols=157 Identities=17% Similarity=0.120 Sum_probs=119.4
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 328 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
.+++|++..+.+...+...++..++++ ..+++.||+|||+.+..+.++..++.....+.++ ...+.+.-++.+
T Consensus 35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G 107 (412)
T TIGR02332 35 GKDLGLSATMFGLAATLFYAAYVICGI-PSNIMLAIIGARRWIAGIMVLWGIASTATMFATG------PESLYLLRILVG 107 (412)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHH
Confidence 344899999999999999999999988 5678888899999998888887777776655432 122334445556
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
++.....|....+.+|.+|+++|+++.|+.+....+|..+++.+.+.+.+..... . ..||+..|.+.++..++..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~-~---~~gwr~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 108 IAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM-A---LKGWQWLFLLEGFPSVILGV 183 (412)
T ss_pred HHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-C---ccchhHHHHHHHHHHHHHHH
Confidence 6667777888888999999999999999999999999999999999887531100 0 02899999998887776655
Q ss_pred HHhhhhhhc
Q 014686 409 MTFKPFLAQ 417 (420)
Q Consensus 409 ~~~~~~~~~ 417 (420)
+.++ ..||
T Consensus 184 ~~~~-~~~~ 191 (412)
T TIGR02332 184 MTWF-WLDD 191 (412)
T ss_pred HHhh-ccCC
Confidence 5544 3443
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.38 E-value=3.3e-12 Score=122.07 Aligned_cols=121 Identities=20% Similarity=0.234 Sum_probs=97.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLG 80 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G 80 (420)
+++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+..+..+..+..... .+.+.+.+..++.+
T Consensus 304 ~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (496)
T PRK03893 304 TDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQ 377 (496)
T ss_pred hhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 577888888 9999999999999999999999999999999988877766665544332 34444545555555
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.......+. ..++.|.+|+++|++++++......+|..+||.+++.+.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 378 MLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 433233344 7889999999999999999999999999999999999998
No 145
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.38 E-value=5.6e-11 Score=109.77 Aligned_cols=145 Identities=16% Similarity=0.094 Sum_probs=118.1
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.++.+.+...+...++..++++ ..+++.||+|||+.+..+..+..++.+.....++ ...+.+..++.+.+
T Consensus 34 ~~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~ 106 (385)
T TIGR00710 34 DLSTPASIVQMTLTLYLLGFAAGQL-LWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN------IETLLVLRFVQAFG 106 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHcc
Confidence 3799999999999999999999987 6778888899999999888877777666554322 22233445555666
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+....+..|.+|+++|+++.|+.+....++..++|.+.+.+.+.. +|+..|++.+.+.++..+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~ 176 (385)
T TIGR00710 107 ASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL----------SWHAIFAFLSLAGILLSALI 176 (385)
T ss_pred hhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHH
Confidence 77778888899999999999999999999999999999999999999877 89999998888777766655
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
+.
T Consensus 177 ~~ 178 (385)
T TIGR00710 177 FF 178 (385)
T ss_pred HH
Confidence 44
No 146
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.38 E-value=5.3e-11 Score=108.40 Aligned_cols=162 Identities=20% Similarity=0.196 Sum_probs=126.1
Q ss_pred HHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014686 226 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
++............|.+..+. +|.++.+.+.+.+...+...++++ ..+++.||+|||+.+..+..+..++.+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 6 FLSGFGFSIISPALPLYLAEE-----LGLSPSQIGLLFSAFFLGSALFSP-FAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHH-HHHCC-----STTTSHCHHHHHHHHHHHHHHHHH-HHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 333333344444555333333 789999999999999999999988 66778888899999999888888874443
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccC
Q 014686 306 PYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 385 (420)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~ 385 (420)
.+. ...+ .+....++.+.+.....+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 80 ~~~-----~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~----- 148 (352)
T PF07690_consen 80 AFA-----SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF----- 148 (352)
T ss_dssp HHH-----CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-----
T ss_pred hhh-----hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-----
Confidence 322 1223 45566667777778889999999999999999999999999999999999999999999777
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHH
Q 014686 386 ASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 386 ~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+|+..|++.+++.++..++
T Consensus 149 -----~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 149 -----GWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp -----HHCCHHHHHHHHHHHHHHH
T ss_pred -----ccccccccccchhhhhhhh
Confidence 7999999999999888775
No 147
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.38 E-value=1.6e-10 Score=109.39 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=106.1
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++|++..+.+...+...++..++++ +.+++.||+|+|+.+..+.+...++.++..+..+. + .+.+..++.++
T Consensus 64 ~~~gls~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~-----~-~l~~~r~l~G~ 136 (476)
T PLN00028 64 DNLNLTKSDIGNAGIASVSGSIFSRL-AMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA-----T-GFIAVRFFIGF 136 (476)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH-----H-HHHHHHHHHHH
Confidence 34799999999988887788888777 77888899999998888777776666555443221 1 12222333333
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+..... .....+++.+|+++||++.|+.+...++|..+++.+.+.+.+...+.... ...||+..|++.+++.++..+.
T Consensus 137 ~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~-~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 137 SLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAP-SFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-chhhhHHHHHHHHHHHHHHHHH
Confidence 333333 34456789999999999999999888899988888877665543221000 0027999999998888776655
Q ss_pred Hhh
Q 014686 410 TFK 412 (420)
Q Consensus 410 ~~~ 412 (420)
.+.
T Consensus 215 ~~~ 217 (476)
T PLN00028 215 VLT 217 (476)
T ss_pred HHH
Confidence 544
No 148
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.37 E-value=7.6e-11 Score=109.81 Aligned_cols=176 Identities=11% Similarity=0.024 Sum_probs=127.7
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARI 293 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 293 (420)
++.++..........+.......+.|.|+.+. +|+++.+++.+.........++.+ .++++.||+ |||+.+..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~l-igG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTPI-LGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccCcHHHHHH
Confidence 44555555555555666667777888888765 799999999999988888788766 889999998 99999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc--hhhHHhhHHHHHHHHHHHHhhh
Q 014686 294 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g~~ 371 (420)
+.++..++.+++..... . ... ..........+.+...+...++.+|.+|++ +|.++.++.+...++|+.++|.
T Consensus 82 G~il~~lg~lll~~~~~--~-~~~--~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 82 GALLMAIGHVVLGASEI--H-PSF--LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHhhc--c-hhH--HHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 98888877655432111 0 011 111111111223344566778899999875 7999999999999999999999
Q ss_pred hhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 372 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 372 ~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
+.|++.+.. ||+..|.+.++..+++.+...
T Consensus 157 l~g~L~~~~----------Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 157 ACGYAQEEY----------SWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHhhh----------ChHHHHHHHHHHHHHHHHHHH
Confidence 999999877 899999987766665554443
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=7.9e-12 Score=116.41 Aligned_cols=132 Identities=18% Similarity=0.210 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
.+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...|. ..++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 566677778888899999999999999999999998888888887778888888999999999999888887 8888899
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHH
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI 165 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
.|+++|++.+++.+....+|..+||.+++.+.+ ..||+. .+...++..++..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~-------~~g~~~---------~f~~~~~~~l~~~~ 392 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA-------NYGFRA---------VFLVTAGVVLFNAV 392 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHh-------hcchhH---------HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988 444444 44566555555443
No 150
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=1.1e-10 Score=110.89 Aligned_cols=173 Identities=19% Similarity=0.085 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 014686 217 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 296 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (420)
.++...+..++............|.+..+ +|.++.+.+...+...++..++.+ ..+++.||+|||+....+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~r~~~~~~~~ 83 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS------LGESPLHMHMVIVSYVLTVAVMLP-ASGWLADRVGVRNIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH------hCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhchHHHHHHHHH
Confidence 45555666666555555666667766543 789999999998888888788876 78889999999999888777
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHH
Q 014686 297 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGAL 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 376 (420)
+..++.+...... + ...+.+...+.+++.....+.......|.+|+++|+++.|+.+....+|..++|.+.|.+
T Consensus 84 ~~~~~~~~~~~~~---~---~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 84 LFTLGSLFCALSG---T---LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHhC---C---HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 7666655543321 1 122334455556666777888888899999999999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 377 FSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 377 ~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.+.. +|+..|.+...+..++.+....
T Consensus 158 ~~~~----------gw~~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 158 VEYA----------SWHWIFLINIPVGIIGAIATLM 183 (471)
T ss_pred Hhhc----------cHHHHHHHHHHHHHHHHHHHHH
Confidence 9876 8999999988777766655544
No 151
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.36 E-value=8.9e-11 Score=111.46 Aligned_cols=180 Identities=10% Similarity=-0.041 Sum_probs=128.0
Q ss_pred Cchhhhccchh-HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 014686 207 TPKKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI- 284 (420)
Q Consensus 207 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~- 284 (420)
.-..+.+|+|+ ++......++..+.......+.+.|+.+. +|++..+++..............+ .++++.||
T Consensus 11 ~~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~~-~~G~LaDr~ 84 (500)
T PRK09584 11 SVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-----LGMSEADSITLFSSFSALVYGLVA-IGGWLGDKV 84 (500)
T ss_pred CCChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhc
Confidence 34455667764 67666666777777777777888888665 789988887777665544444433 78999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcch--hhHHhhHHHHHH
Q 014686 285 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ--RGAANGIAMTGM 362 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~ 362 (420)
+|||+.+..+..+..++.....+.... ...+.....+.+.+.+...+...++..+.+|+++ +..+.++.+...
T Consensus 85 ~G~r~~~~~g~~~~~ig~~l~~~~~~~-----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 85 LGTKRVIMLGAIVLAIGYALVAWSGHD-----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccc-----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 599999999988888776665543211 1112222333444555566777788899887543 456888889999
Q ss_pred HHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 363 SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 363 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
++|..++|.+.|++.+.. ||+..|.+.++..+++.
T Consensus 160 ~iG~~~gp~i~g~l~~~~----------g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 160 NIGSFFSMLATPWLAAKY----------GWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHHHHHHhh----------CHHHHHHHHHHHHHHHH
Confidence 999999999999999987 89999998876555544
No 152
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=1.2e-12 Score=123.04 Aligned_cols=121 Identities=18% Similarity=0.200 Sum_probs=101.7
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc--CCchhHHH--HHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM--GTASVVIFNTLFGLSVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grk~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~r~l 78 (420)
+++|.+..+ .+++.++..++..+++++.|+++||. ++|+...+ +.+..+++.++....++++.+++.+++
T Consensus 269 ~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~ 342 (455)
T TIGR00892 269 KDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIF 342 (455)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 456777778 99999999999999999999999984 33433333 344445555666778899999999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.|++.+...+. .+++.|.+|++++++.+++.+...++|.++||.++|.+.+
T Consensus 343 ~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 343 FGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 99998888877 8999999999999999999999999999999999999987
No 153
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=5.7e-12 Score=115.90 Aligned_cols=121 Identities=13% Similarity=0.041 Sum_probs=105.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLG 80 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G 80 (420)
+++|.++++ .+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.+...+.++. ..+....++.|
T Consensus 233 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 233 QSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVF 306 (377)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 456777777 8999999999999999999999999999999999999888888877776643 33456678888
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
++.+...+. ..++.|.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 307 FTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 887777666 8899999999999999999999999999999999999988
No 154
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=1.7e-10 Score=106.86 Aligned_cols=176 Identities=16% Similarity=0.082 Sum_probs=121.9
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 294 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (420)
++.++...+..++............|.+..+. +|.|..+.|...+...+...+.++ ..+++.||+|||+.+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~-----lg~s~~~~g~~~s~~~~~~~i~~~-~~G~l~Dr~g~r~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHD-----LGFGNTMVGIAVGIQFLATVLTRG-YAGRLADQYGAKRSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHh-----cCCcHHHHHHHHHHHHHHHHHHhh-hhhHHHHhhcchHHHHHH
Confidence 44455555554444444444444555555443 799999999999999999999988 778888889999998888
Q ss_pred HHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhh
Q 014686 295 GVLTIPLLTSYPYIAMLS--GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 372 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 372 (420)
.+...++.+.+....... .......+.+.-.+.+.+.....+...+...+..|+++|++++|........+..++|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 776655443322211100 011223344445555556666677777888899999999999999999899999999999
Q ss_pred hhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHH
Q 014686 373 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIG 406 (420)
Q Consensus 373 ~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~ 406 (420)
.+.+.+.. ||+..+.+.....++.
T Consensus 168 ~~~l~~~~----------g~~~~~~~~~~~~~~~ 191 (392)
T PRK12382 168 GLLLHSHF----------GFAALALTTMVLPLLA 191 (392)
T ss_pred HHHHHhcc----------ChHHHHHHHHHHHHHH
Confidence 99998876 7887766555444333
No 155
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.33 E-value=1.2e-10 Score=109.90 Aligned_cols=175 Identities=11% Similarity=0.064 Sum_probs=131.9
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHH
Q 014686 216 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIA 294 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 294 (420)
+.++......++..+.......+++.|+.+. .++|++..+++...+...+...++++ .++++.|| +|||+.+..+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~---~~lg~s~~~ag~~~~~~~~~~~~~~~-~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQ---AGLGFSQEQAFIIFGAYSALVYLLTS-VGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHh-hHHHHHHhhcchHHHHHHH
Confidence 3445555555665667677777888887542 13689999999999999999999988 77888887 8999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcch---hhHHhhHHHHHHHHHHHHhhh
Q 014686 295 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQ---RGAANGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~g~~~~~~~~g~~~g~~ 371 (420)
..+..++.+.+..... ...+.....+.+.+.+...+...++.++.+|+++ |+++.++.+...++|..+||.
T Consensus 86 ~~~~~~g~~~~~~~~~------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIY------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHhccc------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 9988888776655321 1112223333445555667788888888888654 888999999999999999999
Q ss_pred hhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 372 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 372 ~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
+.+.+.+.. +|+..|.+.++..+++.+..
T Consensus 160 l~g~l~~~~----------g~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 160 LAGVIAENY----------GYHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHHHHhc----------ChHHHHHHHHHHHHHHHHHH
Confidence 999999887 89999998876666554443
No 156
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=2.3e-11 Score=112.05 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=112.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+|+|.++++ .|++.+...++..+..++.+++.||+|+|+.+.++.+...+.....+++++++.+++.++++|+.
T Consensus 233 ~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~ 306 (382)
T TIGR00902 233 QAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGT 306 (382)
T ss_pred HHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 467888888 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHH-HHhHHHHHHHHHHHhHhcc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~ 129 (420)
.+...+. ..++.+. |+++|++..++++ ...++|.++||.++|.+.+
T Consensus 307 ~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 307 FAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887 8899988 9999999999986 5788999999999999998
No 157
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=2.7e-10 Score=108.56 Aligned_cols=171 Identities=16% Similarity=0.096 Sum_probs=125.3
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 014686 223 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+..++...-........|.... ++|.+..+.++..+.+.++.....+ ..+++.||+|||+.+..+..+..++.
T Consensus 13 ~~~~~~~ld~tiv~~a~p~i~~------~l~~s~~~~~~~~~~~~l~~~~~~~-~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 13 LVYIPVAIDATVLHVAAPTLSM------TLGASGNELLWIIDIYSLVMAGMVL-PMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------HhCCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3334433333444444554433 3788899999999998888888876 67888889999999999998888887
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 303 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
+.....++ ...+++.-.+.+.+.....+.......+.+ |+++|+++.|+......+|..+||.++|.+.+..
T Consensus 86 ~~~~~a~~------~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~- 158 (495)
T PRK14995 86 LAAAFSPT------ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF- 158 (495)
T ss_pred HHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-
Confidence 77665432 222334444555566667776666665554 7899999999999999999999999999999987
Q ss_pred hccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 014686 382 KRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 382 ~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
+|++.|++...+.++..++..+ ..|+
T Consensus 159 ---------gwr~~f~i~~~~~~~~~~l~~~-~l~~ 184 (495)
T PRK14995 159 ---------YWGSVFLINVPIVLVVMGLTAR-YVPR 184 (495)
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 8999999988777776666555 3443
No 158
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.31 E-value=1.4e-10 Score=110.69 Aligned_cols=144 Identities=17% Similarity=0.069 Sum_probs=118.0
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|.++.+.+...+...++..++.+ ..+++.||+|||+.+..+..+..++.+.....++ ...+.+..++.+++.
T Consensus 32 ~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~G~~~ 104 (485)
T TIGR00711 32 LGSSLSQVQWVITSYMLANAISIP-LTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPN------LELMIIFRVIQGFGG 104 (485)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHH-hHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCC------HHHHHHHHHHHHhhh
Confidence 788999999999999999999877 7788889999999999988888777766654322 223444555666677
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
....+....++.|.+|+++|+++.++......+|..++|.+.|.+.+.. +|+..|++.+.+.++..++..
T Consensus 105 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 105 GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY----------HWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc----------CceehhhhhhHHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999999998876 899999988777766655554
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 175 ~ 175 (485)
T TIGR00711 175 F 175 (485)
T ss_pred H
Confidence 4
No 159
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.31 E-value=3.8e-10 Score=104.46 Aligned_cols=145 Identities=12% Similarity=0.075 Sum_probs=113.4
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.+..+.+...+...++..++++ ..+++.||+|||+.+..+.....++.......++ ...+....++.+..
T Consensus 32 ~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~l~g~~ 104 (392)
T PRK10473 32 DLNASEAQLHIAFSVYLAGMAAAML-FAGKIADRSGRKPVAIPGAALFIIASLLCSLAET------SSLFLAGRFLQGIG 104 (392)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhh
Confidence 3789999999999998888888877 7788888899999998888777777666544321 11222333444555
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+....+..|.+|+++|+++.+..+....++..++|.+.+.+.+.. +|+..|++.+++.++..++.
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~----------g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF----------PWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc----------ChHHHHHHHHHHHHHHHHHH
Confidence 56667778889999999999999999999999999999999998888766 89999999888777776655
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
..
T Consensus 175 ~~ 176 (392)
T PRK10473 175 LF 176 (392)
T ss_pred HH
Confidence 44
No 160
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.30 E-value=2.7e-08 Score=90.87 Aligned_cols=326 Identities=14% Similarity=0.104 Sum_probs=180.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh------h--h-----h--HHHHHHHHHHhhhhccchh
Q 014686 23 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL------S--V-----N--FWMAVLTRFLLGSLNGLLG 87 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~------~--~-----~--~~~l~~~r~l~G~~~g~~~ 87 (420)
-.-.+..++.++..|.+.||..|+++...+.+..-++..+... . + + ...+++.-.+.|..+-...
T Consensus 45 l~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las 124 (432)
T PF06963_consen 45 LVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLAS 124 (432)
T ss_pred HHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3345566788888999999999999877665544333222211 1 1 1 1122222222222222222
Q ss_pred hh--Hhhhhhhc------hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 88 PI--KAYACEIF------REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 88 ~~--~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
.+ .+.=.||. +++++.+.++.+.-.--+..+++|++.|.+.+ ..+......+.+..
T Consensus 125 ~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~ 188 (432)
T PF06963_consen 125 IANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGW 188 (432)
T ss_pred hhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHH
Confidence 21 22223442 45667788888888888999999999999987 22333333334444
Q ss_pred HHHHHHH-HH-------hcccccCCCCCCCCcccchhH------hhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHH
Q 014686 160 AFGVTIA-AF-------WLPETLHRHNDDDDSCDVSYD------ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVY 225 (420)
Q Consensus 160 ~~~~~~~-~~-------~l~e~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
.++.... .+ ..|+-..++++++++.++..+ ......+..++.-++....++..++++.+......
T Consensus 189 N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~al- 267 (432)
T PF06963_consen 189 NLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFAL- 267 (432)
T ss_pred HHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHH-
Confidence 4332221 11 122222111111111111100 00000001111112224556777777765544443
Q ss_pred HHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Q 014686 226 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSY 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
.+..+...++......|+.. .|+++..+|..-....+.++.+.. ..+++.+|+|..+.-..+......++...
T Consensus 268 alLY~TVLsf~~lmt~yl~~------~G~s~~~igi~R~~gav~Gl~gT~-~~p~l~~riGlvr~G~~~l~~q~~~L~~~ 340 (432)
T PF06963_consen 268 ALLYFTVLSFGGLMTAYLKS------QGYSPSVIGIFRGLGAVFGLLGTW-VYPWLMKRIGLVRAGLWSLWWQWVCLALC 340 (432)
T ss_pred HHHHHHHhcCcHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcchhhHHHHHHHHHHHHHHH
Confidence 33344456667777778766 499999999999998899999877 89999999998887777766544333222
Q ss_pred H---HHHHhh-hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhh
Q 014686 306 P---YIAMLS-GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 372 (420)
Q Consensus 306 ~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 372 (420)
. +.+..+ .......++.....-=.+.-++-.....+++|.+|+++||+..|+-+..+++...+.-.+
T Consensus 341 v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 341 VVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 222111 112222222222222233344455667788899999999999999999998877655443
No 161
>TIGR00895 2A0115 benzoate transport.
Probab=99.30 E-value=1.2e-10 Score=107.93 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=113.3
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.++.+.+.+.+...++..++++ ..+++.||++||+.+..+..+..++.+......+ ...+.+..++.+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~ 118 (398)
T TIGR00895 46 EWGLDPVQLGFLFSAGLIGMAFGAL-FFGPLADRIGRKRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLG 118 (398)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHH-HhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccc------hHHHHHHHHHHhcc
Confidence 3789999999999998888888887 7778888889999998888777776665544321 22233444555566
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+...++..|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|+..|++.+.+.++..++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------g~~~~~~~~~~~~~~~~~~~ 188 (398)
T TIGR00895 119 LGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF----------GWRSLFYVGGIAPLLLLLLL 188 (398)
T ss_pred cccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc----------cceeehhhhhhHHHHHHHHH
Confidence 66778888999999999999999999999999999999999999998876 78888888765555554444
Q ss_pred h
Q 014686 411 F 411 (420)
Q Consensus 411 ~ 411 (420)
.
T Consensus 189 ~ 189 (398)
T TIGR00895 189 M 189 (398)
T ss_pred H
Confidence 3
No 162
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=6.4e-11 Score=109.10 Aligned_cols=118 Identities=20% Similarity=0.276 Sum_probs=97.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
++.|.++++ .++..+...++..+++++.|++.||+|||+++..+.....++.+... + .......+++.|++
T Consensus 228 ~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~ 298 (381)
T PRK03633 228 NHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAA 298 (381)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHH
Confidence 345677777 89999999999999999999999999999999888888777665443 2 23344567778887
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.....|. .+.+.|..|+++++...+......++|..+||.++|++.+
T Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 299 GFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred HHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666776 8888999998888888888888999999999999999998
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=6.2e-11 Score=104.34 Aligned_cols=152 Identities=14% Similarity=0.098 Sum_probs=128.0
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 328 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
.++.++|..+.|.+.+...+.--++.. +.+.++||.++|+.+..++++.++..+++.+.++ ...+.+...+-+
T Consensus 56 ~e~~~lsk~~lG~i~s~f~i~YG~sKf-~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s------~~~~~~l~~lng 128 (448)
T COG2271 56 IEDGGLSKTQLGILGSAFSITYGVSKF-VMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPS------LFLFAVLWVLNG 128 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHH-HhhhhcccCCCceeehHHHHHHHHHHHHHhhhhH------HHHHHHHHHHHH
Confidence 334679999999999999999999987 8889999999999999999999999988887653 223445555556
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhh--hHHHHhhhhccCCCCCCCchHHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG--GALFSWAQKRLDASFLPGSQMVFFVLNVVEAIG 406 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~--g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~ 406 (420)
.+.+.-.|.....+.+-+|+++||+..++-|+..++|+.+.|.+. +.+.++. +|+..|++-++++++.
T Consensus 129 ~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~----------~w~~~f~~pgiiaiiv 198 (448)
T COG2271 129 WFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG----------GWRAAFYFPGIIAIIV 198 (448)
T ss_pred HHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc----------chhHHHHHHHHHHHHH
Confidence 677777788888888889999999999999999999999999999 8888776 8999999999999888
Q ss_pred HHHHhhhhhhcc
Q 014686 407 VLMTFKPFLAQR 418 (420)
Q Consensus 407 ~~~~~~~~~~~~ 418 (420)
.++.++ ..|++
T Consensus 199 al~~~~-~~rd~ 209 (448)
T COG2271 199 ALILLF-LLRDR 209 (448)
T ss_pred HHHHHH-HhCCC
Confidence 887776 55544
No 164
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.28 E-value=3.1e-11 Score=114.26 Aligned_cols=122 Identities=20% Similarity=0.225 Sum_probs=95.4
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHH--HhhhhhHHHHHHHHHHh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL--FGLSVNFWMAVLTRFLL 79 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~ 79 (420)
++++|.|..+ .++..+...++..++.+.+|+++||+|||+.+.....+..++... ....++.+.+.+.+++.
T Consensus 286 ~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (467)
T PRK09556 286 FQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFAL 359 (467)
T ss_pred HHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4568888888 899999999999999999999999999998876655444433322 22345666777888888
Q ss_pred hhhc-cchhhhHhhhhhhchhhhhhhHHHHHHHHhHH-HHHHHHHHHhHhcc
Q 014686 80 GSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 129 (420)
Q Consensus 80 G~~~-g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~l~~~l~~ 129 (420)
|++. +...+......|.+|+++|+++.|+.+...++ |..++|.+.|.+.+
T Consensus 360 G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 360 GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 8643 33333346677999999999999999988886 77999999999987
No 165
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=6.4e-10 Score=102.73 Aligned_cols=166 Identities=11% Similarity=-0.025 Sum_probs=120.8
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 294 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (420)
+|+++...+..++..+.........+.+.. +++.++.+.+...+...+...+.++ ..+++.||++||+++..+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~~~~~~~l~~~l~~~-~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK------ELHYPDWSQPLLQMFFVLAYIVLAP-FVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCCcHHHHHHHHHHHHHHHHHHHh-hhhHhhhccCCchhhHHH
Confidence 455666666666555443333333333322 2677888899999998888888877 788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhh
Q 014686 295 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 374 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 374 (420)
..+..++.+....... . ...-++.+.+.....|...+++.|.+|+++|+++.|+.+....++..+||.++|
T Consensus 75 ~~~~~~~~~~~~~~~~-----~----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG 145 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH-----P----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGG 145 (393)
T ss_pred HHHHHHHHHHHHHHHH-----H----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776655433221 1 122344566778889999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 375 ALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 375 ~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
.+.+.. +...+.+.+...+++.
T Consensus 146 ~l~~~~-----------~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 146 ALADPH-----------AEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHHH
Confidence 999853 5556666555544443
No 166
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.27 E-value=8.2e-10 Score=101.26 Aligned_cols=177 Identities=12% Similarity=0.012 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 014686 218 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 297 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
++...+.++........+..+.|.+..+. +|+++.+.+...+...++..++++ ..+++.||+|||+.+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDD-----LGLSTAQLGNLVAVPVLAGAVLRI-ILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHH-----hCCCHHHhhHhhHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 44444555554555455555555444333 899999999999999999999988 777888889999999999888
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 298 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..++.+...+... ....+.+..++.+.... ..+....++.+.+|+++|+++.++.....++|..+++.+.+.+.
T Consensus 77 ~~i~~~~~~~~~~-----~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 77 LAIPCLWAGLAVQ-----SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHhh-----hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8887776655431 11122233333444433 34556778889999999999999999899999999998888877
Q ss_pred HhhhhccCCCCCCCchHHH-HHHHHHHHHH
Q 014686 378 SWAQKRLDASFLPGSQMVF-FVLNVVEAIG 406 (420)
Q Consensus 378 ~~~~~~~~~~~~~g~~~~f-~~~~~~~~~~ 406 (420)
+...+..+.....+|+..| ...+.+..+.
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHHH
Confidence 6543221110112688888 4334444333
No 167
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.27 E-value=4.7e-10 Score=105.99 Aligned_cols=172 Identities=8% Similarity=-0.045 Sum_probs=128.9
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARI 293 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 293 (420)
.|.++......+...+........++.|+.+. +|++..+++..............+ .++++.|| +|||+.+..
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-----lg~~~~~a~~i~~~~~~~~~~~~~-~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-----LGFSQEQAFITFGAFAALVYGLIS-IGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHh-hHHHhhhhccchHHHHHH
Confidence 34556666666666666677777788887765 789999988888777766666655 78999998 999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc--hhhHHhhHHHHHHHHHHHHhhh
Q 014686 294 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g~~ 371 (420)
+.++..++.+......... ..+.+...+.+.+.+...|...+++.|.+|++ +|++++++.....++|..+||.
T Consensus 87 g~~~~~~g~~~~~~~~~~~-----~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLLKP-----DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHHHHHHHhccch-----hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 9999988877766543211 11222333344566667788889999999877 4588999999999999999999
Q ss_pred hhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 372 GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 372 ~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
+.|++.++. ||+..|++.++..+++.
T Consensus 162 l~g~l~~~~----------gw~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 162 LAPVIADKF----------GYSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHHHHHHhh----------ChHHHHHHHHHHHHHHH
Confidence 999999987 89999988765444443
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.27 E-value=9.1e-10 Score=103.98 Aligned_cols=184 Identities=18% Similarity=0.184 Sum_probs=142.6
Q ss_pred hhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Q 014686 210 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 289 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (420)
...+|||.|....+...+.+........-.+.+..+ ..-|+...+++.....+..++.++ .++.+.||++||+
T Consensus 4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~------lt~S~~~valv~~a~~LP~~Llsl-~aG~laDr~drrr 76 (524)
T PF05977_consen 4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ------LTGSPLMVALVQAASTLPILLLSL-FAGALADRFDRRR 76 (524)
T ss_pred cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccchH
Confidence 345889999988888888777766666555544432 456788889998888888888877 7888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHh
Q 014686 290 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAG 369 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g 369 (420)
++...-++..+..+.+........ ...+.+++..++.+.+.....|..++.+.+++|+++...+.++.+...++...+|
T Consensus 77 ili~~~~~~~~~~~~L~~l~~~~~-~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 77 ILILSQLLRALVALLLAVLAFFGL-LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence 999888777665555444333222 2233455666777788888999999999999999999999999999999999999
Q ss_pred hhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 370 PAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 370 ~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
|.++|.++... |....|.+.++..++......
T Consensus 156 PalgG~Lva~~----------G~~~~f~inalsfl~~i~~l~ 187 (524)
T PF05977_consen 156 PALGGILVAFF----------GAAAAFLINALSFLISILALL 187 (524)
T ss_pred chHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 778888887776666544433
No 169
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=4.7e-10 Score=104.30 Aligned_cols=149 Identities=13% Similarity=0.109 Sum_probs=114.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
+++.+..+.+...+...++..++++ ..+.+.||+|||+.+..+..+..++.+.....++ ...+.+.-++.+.+
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~-~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQW-LLGPLSDRIGRRPVLITGALIFTLACAATLFTTS------MTQFLIARFIQGTS 117 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHH
Confidence 4788999999999999999999988 7788999999999999888777776665544322 11233333444444
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+.......|.+|+++++++.++.+....++..+||.+++.+.+.. +|+..|++.+++.+++.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~----------gw~~~f~~~~~~~~i~~~~~ 187 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV----------HWKVLFAIIAVMGLIAFVGL 187 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHH
Confidence 44445556677888899999999999999999999999999999998876 89999999988877776654
Q ss_pred hhhhhhc
Q 014686 411 FKPFLAQ 417 (420)
Q Consensus 411 ~~~~~~~ 417 (420)
+. ..||
T Consensus 188 ~~-~lp~ 193 (413)
T PRK15403 188 LL-AMPE 193 (413)
T ss_pred HH-hCCC
Confidence 43 3444
No 170
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.26 E-value=1e-09 Score=102.06 Aligned_cols=143 Identities=10% Similarity=0.025 Sum_probs=112.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.++.+.+...+...++..++++ ..+++.||+|||+.+..+..+..++.+...+.++ ...+....++.+.+
T Consensus 41 ~~~~s~~~~g~~~~~~~~~~~~~~~-~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~ 113 (405)
T TIGR00891 41 EFGLTTVDAASLISAALISRWFGAL-MFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPG------YITMFIARLVIGIG 113 (405)
T ss_pred HhCCChhhHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhh
Confidence 3799999999999999999999988 7788888899999999888777777666554332 22233445555566
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
.....+....+..|..|+++|+++.++.+....+|..+++.+.+.+.+..+ .+|+..|.+.+...++..+
T Consensus 114 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--------~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 114 MGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG--------DGWRALFFISILPIIFALW 183 (405)
T ss_pred hhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------ccHHHHHHHHHHHHHHHHH
Confidence 667778888899999999999999999999999999999999999887651 1488888876655555433
No 171
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.26 E-value=4.4e-10 Score=103.48 Aligned_cols=144 Identities=15% Similarity=0.138 Sum_probs=116.9
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|.++.+.+...+...++..++++ ..+.+.||+|||+.+..+..+..++.......++ ...+.+..++.+++.
T Consensus 21 ~~~s~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~l~g~~~ 93 (377)
T PRK11102 21 FGVSAGSVQMTLSAYILGFAIGQL-FYGPMADSFGRKPVILGGTLVFALAAVACALAQT------IDQLIYMRFLHGLAA 93 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHH-hhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHH
Confidence 789999999999999999999887 6778888889999999988888777776655332 112334445555666
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
....+....+..|..|+++|+++.++.+....+|..++|.+.+.+.+.. +|+..|++.+.+.++..++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 94 AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF----------SWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChHHHHHHHHHHHHHHHHHHH
Confidence 6777888889999999999999999999999999999999999999877 899999988887777665554
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 164 ~ 164 (377)
T PRK11102 164 F 164 (377)
T ss_pred H
Confidence 4
No 172
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.26 E-value=5.6e-10 Score=101.75 Aligned_cols=147 Identities=12% Similarity=0.039 Sum_probs=106.9
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|.++.+.|...+...++..++++ ..+++.||+|||+++.........+.... .. . .....+.+.-++.+.+.
T Consensus 21 ~~~s~~~~g~~~s~~~~g~~i~~~-~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~~-~----~~~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 21 IDVSKEELGLLAITYPAAFLALTI-PSGLLLDRAFKRWFLFGSLATFAAAAGRL-LD-P----FNYEWLLACQLLAALGQ 93 (368)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccchHHHHHHHHHHHHHHHHH-HH-h----ccHHHHHHHHHHHHhHh
Confidence 789999999999999999999988 56888888898887654443333322111 11 0 11223444444444444
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
.. .+......+|.+|+++|+++.++.+....+|..+++.+.+.+.+.. ||+..|.+.+++.++..++.+
T Consensus 94 ~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~----------gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 94 PF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG----------GLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------chHHHHHHHHHHHHHHHHHHH
Confidence 43 3444555688899999999999999999999999999999998876 899999998888877766665
Q ss_pred hhhhhc
Q 014686 412 KPFLAQ 417 (420)
Q Consensus 412 ~~~~~~ 417 (420)
. ..||
T Consensus 163 ~-~lp~ 167 (368)
T TIGR00903 163 A-ALPA 167 (368)
T ss_pred H-HcCC
Confidence 5 5554
No 173
>PRK11043 putative transporter; Provisional
Probab=99.26 E-value=9e-10 Score=102.30 Aligned_cols=145 Identities=19% Similarity=0.076 Sum_probs=111.4
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.++.+.+...+...++..++++ ..+++.||++||+.+..+..+..++.+......+ ...+.+..++.+.+
T Consensus 35 ~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~ 107 (401)
T PRK11043 35 DLQTSASAVSASLSLFLAGFALGQL-LWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVES------AAQLLVLRFVQAVG 107 (401)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHhh
Confidence 3789999999999999999999988 7778888899999998888777666655544321 11222333344444
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+.......|.+|++++++..+..+....++..++|.+.+.+.+.. +|+..|++.+.+.++..+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----------g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 108 VCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF----------GWQAIFATLFAITLLLILPT 177 (401)
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------ChHHHHHHHHHHHHHHHHHH
Confidence 44555666778889999999999999999899999999999999999887 89999998887777766554
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
+.
T Consensus 178 ~~ 179 (401)
T PRK11043 178 LR 179 (401)
T ss_pred HH
Confidence 43
No 174
>PRK03699 putative transporter; Provisional
Probab=99.26 E-value=8.2e-10 Score=102.24 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=110.3
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|++..+.+...+...++..++++ ..+++.||+|||+.+..+..+..++.+.....++ ...+.+..++.+..
T Consensus 36 ~~~~s~~~~g~~~s~~~~~~~i~~~-~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~G~~ 108 (394)
T PRK03699 36 YFNLPVSSMSNTFTFLNAGILISIF-LNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHS------LALFSIAMFVLGVV 108 (394)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcch------HHHHHHHHHHHHHh
Confidence 3799999999999999998888877 7888888999999988888777777666554322 11223333444444
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+.....+.+.+|+++|+++.+..+....+++.++|.+.+.+.+.. .+|+..|.+.+++.++..++.
T Consensus 109 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 109 SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS---------IEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------ccHHHHHHHHHHHHHHHHHHH
Confidence 55556667788888899999999999998888999999999998887543 189999998888776665544
Q ss_pred h
Q 014686 411 F 411 (420)
Q Consensus 411 ~ 411 (420)
+
T Consensus 180 ~ 180 (394)
T PRK03699 180 L 180 (394)
T ss_pred H
Confidence 4
No 175
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.26 E-value=2.3e-10 Score=105.93 Aligned_cols=144 Identities=16% Similarity=0.098 Sum_probs=118.1
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|.++.+.+.+.+...++..++++ ..+++.||+|||+.+..+..+..++........+ ...+.+...+.+++.
T Consensus 24 ~g~s~~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 24 LGLSAAQYGYVFSAFSWGYVVGQF-PGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA------YVSLYILRVLLGAAE 96 (399)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHH-hHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC------HHHHHHHHHHHHHHH
Confidence 789999999999999999999988 7778888889999998888877777666655431 223444555566667
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
....+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|+..|.+.+++.++..+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF----------SWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC----------CchHHHHHHHHHHHHHHHHhh
Confidence 7788888999999999999999999999999999999999999998877 899999988887776655544
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 167 ~ 167 (399)
T TIGR00893 167 K 167 (399)
T ss_pred h
Confidence 3
No 176
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=8.5e-11 Score=111.81 Aligned_cols=150 Identities=19% Similarity=0.211 Sum_probs=108.9
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh-----hh------hHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-----SV------NFWM 71 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----~~------~~~~ 71 (420)
+++|.+.++ .++......++..++.++.|+++||+|||+.+..+.++..++.++.++ .+ +...
T Consensus 312 ~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 312 ENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 456777767 788889999999999999999999999999999988888877776652 11 2233
Q ss_pred HHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccch
Q 014686 72 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 150 (420)
Q Consensus 72 l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~ 150 (420)
+....++.+.......+. ..++.|.+|+++|++++++.....++|.+++|.+.+.+.+ ..+|+..|
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~-------~~~~~~~f------ 452 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE-------SIGVGGVF------ 452 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCcccee------
Confidence 333333333333333455 7788999999999999999999999999999999999987 55665555
Q ss_pred HHHHHHHHHHHHHH-HHHHhccccc
Q 014686 151 LPCLCISLFAFGVT-IAAFWLPETL 174 (420)
Q Consensus 151 ~~~~~~~~~~~~~~-~~~~~l~e~~ 174 (420)
.+.++..++.. ...++.||++
T Consensus 453 ---~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 453 ---IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred ---hhHHHHHHHHHHHHheecccCC
Confidence 34444444433 3344556544
No 177
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.26 E-value=3e-10 Score=106.66 Aligned_cols=149 Identities=9% Similarity=0.042 Sum_probs=109.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
.|.++.+.+...+...++..++++ ..+++.||+++|+.+..+..+..++.+.....+... .....+.+..++.+++.
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~-~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~~~ 132 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKF-IMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWAT--SSIAIMFVLLFLNGWFQ 132 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhh-ccchhhhccCCceehHHHHHHHHHHHHHHhcccccc--chHHHHHHHHHHHHHHh
Confidence 489999999999999999999887 778888999999988888777777666554332111 11122223333344444
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
....+.....+.|.+|+++|++++|+.+....+++.++|.+.+...+... +|+..|++.+.+.++..+..+
T Consensus 133 g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---------~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 133 GMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN---------DWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred hcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHHHHH
Confidence 45556677778889999999999999999999999999988876655421 799999998888777655544
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 204 ~ 204 (438)
T TIGR00712 204 A 204 (438)
T ss_pred H
Confidence 3
No 178
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.25 E-value=1e-09 Score=102.13 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=114.2
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
++++.++.+.+...+...++..++++ ..+.+.||+|||+.+..+.....++........+ ...+....++.+.
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~ 113 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQW-LLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQS------IEQFTLLRFLQGI 113 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHh
Confidence 34789999999999998999888877 6778888899999998888777766665544321 1123333444444
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
......+.......|.+|+++|+++.++......++..++|.+.+.+.+.. +|+..|++.+++.+++.+.
T Consensus 114 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----------~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL----------PWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CccHHHHHHHHHHHHHHHH
Confidence 445556777788889899999999999998888899999999999998876 8999999988888777665
Q ss_pred Hhhhhhhc
Q 014686 410 TFKPFLAQ 417 (420)
Q Consensus 410 ~~~~~~~~ 417 (420)
.+. ..||
T Consensus 184 ~~~-~~~~ 190 (406)
T PRK15402 184 LWR-AMPE 190 (406)
T ss_pred HHH-hCCC
Confidence 544 3444
No 179
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.25 E-value=1e-08 Score=93.46 Aligned_cols=334 Identities=14% Similarity=0.042 Sum_probs=203.3
Q ss_pred hHHH-HHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhh
Q 014686 18 AGYV-GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACE 95 (420)
Q Consensus 18 ~g~~-~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 95 (420)
.|.. .++-.....+++++.+.+.|+.|.|..++++........+.+-+ +|-+.++.+-.+.|+|.+..+.. -.+++|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhh
Confidence 3443 67788888999999999999999999999999998887776644 45667788899999999998888 899999
Q ss_pred hchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccC-Ccccccc-ccccCccchH---HHHHHHHHHHH---HHHHH
Q 014686 96 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFSSE-SLFGKFPYFL---PCLCISLFAFG---VTIAA 167 (420)
Q Consensus 96 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~-~~~~gw~-~~~~~~~~~~---~~~~~~~~~~~---~~~~~ 167 (420)
..++|++.+..++.-+....+.++|...-..+....... ....+-+ ..+ ... .. ...+..++... .++..
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~~~~~v~~~~~~l~~i~~ 207 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVF-EVL-FIDFEIKVLFGVLLAISVLSIINF 207 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhc-chh-hhhHHHHHHHHHHHHHHHHHhhhe
Confidence 999999999999999999999988877665554322100 0000110 000 000 00 00111111111 11111
Q ss_pred HhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcc
Q 014686 168 FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 247 (420)
Q Consensus 168 ~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
.++|.+......+..+ .. ..+..+...+++++|+.+.....++...+....+...+|......
T Consensus 208 ~~~p~~~~~~~~~~~~-~~---------------~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft- 270 (461)
T KOG3098|consen 208 DFLPSKDVVNCKSSSE-TS---------------FSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFT- 270 (461)
T ss_pred eecCccchhhhhhhcc-cc---------------HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhh-
Confidence 1222211111110000 00 011112345667788887777766666555555555555444322
Q ss_pred cCCccCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHHHHHHHHhhh----------
Q 014686 248 KLGGLNY-STQMVGEVLAITGFSLLVFQLSLYPFLERI---LGPIMVARIAGVLTIPLLTSYPYIAMLSG---------- 313 (420)
Q Consensus 248 ~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 313 (420)
...+. +....+......+++.+.+++ ....+.|| +|+++....+..+.....++.........
T Consensus 271 --~~~~~n~~~~~ai~~~~~g~g~v~~g~-~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~ 347 (461)
T KOG3098|consen 271 --RKLGSNTTYLIAIYSIGIGLGEVIGGL-DFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPL 347 (461)
T ss_pred --hhccCcchhHHHHHHHHHhHHHHHHHH-HHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccc
Confidence 11222 233445555666777777666 34444443 46777777777666665555433221111
Q ss_pred --hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhH
Q 014686 314 --FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGA 375 (420)
Q Consensus 314 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 375 (420)
........+..++.|+.....+...+.+.+... +++|.++.++.-.-+.++.+++-.....
T Consensus 348 ~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 348 LFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred ccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 012445666777888889999999999999988 6889999999888888887776554433
No 180
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.24 E-value=1.1e-09 Score=101.38 Aligned_cols=145 Identities=19% Similarity=0.089 Sum_probs=110.3
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|.++.+.+...+...+...++++ ..+.+.||+|||+.+..+..+..++.+.....++ ...+.+..++.+++
T Consensus 37 ~~~~s~~~~~~~~~~~~~~~~~~~~-~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~~ 109 (394)
T PRK11652 37 DLNVREGAVQAVMAAYLLTYGLSQL-FYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS------LTVLIAASAIQGLG 109 (394)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhh
Confidence 3799999999999999999999987 7778888899999998888777766665544321 12233334444444
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....+.......|..++++++++.+..+....++..++|.+.+.+.+.. +|+..|.+.+++.++..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----------g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 110 TGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF----------GWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------ChHHHHHHHHHHHHHHHHHH
Confidence 44556666777888889899999999999999999999999999998876 89999998877666554444
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
..
T Consensus 180 ~~ 181 (394)
T PRK11652 180 AR 181 (394)
T ss_pred HH
Confidence 33
No 181
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.24 E-value=1.3e-09 Score=101.18 Aligned_cols=156 Identities=15% Similarity=0.056 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Q 014686 216 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (420)
|++....+..++..........+.+.+..+ +|.++.+.+...+...++..++++ ..+++.||+|||+.+..+.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~i~~~-~~g~l~dr~g~k~~l~~~~ 85 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA------LGLSPQQSASAFTLYGIAAAISAW-ISGVVAEIIGPLKTMMIGL 85 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH------hCCCHHHhHHHHHHHHHHHHHHHH-HHHHHHHHcCcHHHHHHHH
Confidence 444555555555555544444455555532 689999999999999999999988 7788888899999999888
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHH-HHhhhhhh
Q 014686 296 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFK-AAGPAGGG 374 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~g~~~~g 374 (420)
.+..++.+.......... .+..+.....+.+.+.....+.......+..|+++|++++|+.+...++|. .++|.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~ 163 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHA--NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSS 163 (402)
T ss_pred HHHHHHHHHHHHHhccCc--cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877776544322111101 122222333334444455556666777788999999999999999999996 58999988
Q ss_pred HHHHhh
Q 014686 375 ALFSWA 380 (420)
Q Consensus 375 ~l~~~~ 380 (420)
.+.+..
T Consensus 164 ~l~~~~ 169 (402)
T TIGR00897 164 YAIPAF 169 (402)
T ss_pred hccccc
Confidence 888766
No 182
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.24 E-value=2.4e-09 Score=99.28 Aligned_cols=184 Identities=8% Similarity=-0.074 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 014686 218 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 297 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
+......++...+.........|.+. +++|.+..+.|.+.+...++..++++ ..+++.||+|+|+.+..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~------~~~~~s~~~~g~l~s~~~~g~~i~~~-~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQ------QAFTLTAFQAALVQSAFYGGYFIMAI-PAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH------HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHH
Confidence 34444455555544444344455442 23799999999999999999999988 677888899999999999998
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 298 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..++.+.+......+ .+..+....++.+.+.....+..+.+..+..|++++++..++.+...++|..++|.+.+.+.
T Consensus 78 ~~~g~~l~~~~~~~~---~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 78 YALGAFLFWPAAEIM---NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHhhc---cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888876654432211 12234444555566667777777888888899999999999999999999999999999886
Q ss_pred HhhhhccC----------------CCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 378 SWAQKRLD----------------ASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 378 ~~~~~~~~----------------~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
....+... .....+|+.+|.+.+++.++..++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44211000 00012689999888887776655443
No 183
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.24 E-value=2e-10 Score=106.18 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=110.7
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHhhhh
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV-NFWMAVLTRFLLGSL 82 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 82 (420)
++|.+.++ .|...+.+.++..++++..|++.||+|||+.+..+..+..++.++....+ +...+. -++.|++
T Consensus 234 ~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g 305 (393)
T PRK09705 234 EIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLG 305 (393)
T ss_pred HcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHh
Confidence 46888888 99999999999999999999999999999999888887777766554333 322222 2456887
Q ss_pred ccchhhh-Hhhhhhhch-hhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHH
Q 014686 83 NGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA 160 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~ 160 (420)
.+...|. .....+..+ +++|++.+++.+....++..++|.+.+++.+ ..| ++...+.+..+..
T Consensus 306 ~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~-------~~g--------~~~~~~~~~~~~~ 370 (393)
T PRK09705 306 LGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS-------ISG--------NYLMDWAFHALCV 370 (393)
T ss_pred ccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhC--------CchHHHHHHHHHH
Confidence 7777675 666667664 6789999999999999999999999999998 222 1333334444444
Q ss_pred HHH-HHHHHhcccccCCCC
Q 014686 161 FGV-TIAAFWLPETLHRHN 178 (420)
Q Consensus 161 ~~~-~~~~~~l~e~~~~~~ 178 (420)
+.. .......||+++++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 371 VGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHHHHHHHhccccccchh
Confidence 443 334556677665443
No 184
>PRK09952 shikimate transporter; Provisional
Probab=99.23 E-value=1.6e-10 Score=108.39 Aligned_cols=151 Identities=16% Similarity=0.188 Sum_probs=103.8
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh---h-hhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---S-VNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l 78 (420)
+++|.++++ ...+.....+...++.+..|+++||+|||+++..+.++..++.+.... . ++.+.+++..++
T Consensus 279 ~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 279 QNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 345665554 455555566677888899999999999999998887766555433322 1 234444555667
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHH-HHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
.|++.+...+. .+++.|.+|++.|+.+.++.. .+..+|..++|.+.+++.+. .+ .+|..++...
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~-------~~-------~~~~~~~~~~ 418 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY-------FG-------GSWHSVAIYL 418 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-------cC-------CCchHHHHHH
Confidence 77877776665 899999999999998988854 44568999999999999872 11 1244444555
Q ss_pred HHHHHHHHHHHHhcccc
Q 014686 157 SLFAFGVTIAAFWLPET 173 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~ 173 (420)
++.+++..+..+.++|+
T Consensus 419 ~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 419 LAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHcccc
Confidence 55566555555666653
No 185
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=5.4e-09 Score=96.52 Aligned_cols=190 Identities=11% Similarity=-0.001 Sum_probs=121.0
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 294 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (420)
+|.++...+.+.........+....+.... .++++++.+.+.+.++..+...+.++ ..+++.||+|.|++...+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~-----~~~~ls~~q~g~l~ai~~l~~al~ri-p~G~l~Dr~G~R~v~~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNK-----IGFNFTTDQLFLLTALPSVSGALLRV-PYSFMVPIFGGRRWTVFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHH
Confidence 345555555554444444444333332222 23899999999999999999999988 447888889999999888
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhh
Q 014686 295 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGG 374 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g 374 (420)
.++..+..+...+...... .....+.+..++.++. ....+.....+++.+|+++||++.|+....+++|..+++.+..
T Consensus 107 ~ll~~i~~~~~~~a~~~~~-~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPN-TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHcccC-CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 8887777666554311001 1122334444444444 4566778888999999999999999997777777777666665
Q ss_pred HHH-----HhhhhccCCC---CCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 375 ALF-----SWAQKRLDAS---FLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 375 ~l~-----~~~~~~~~~~---~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.+. +..+...... ...+++.+.++.+.+.++..++.++
T Consensus 185 ~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 185 LVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 3221110000 0114777777777777776666655
No 186
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.21 E-value=2.3e-09 Score=100.50 Aligned_cols=137 Identities=9% Similarity=-0.055 Sum_probs=110.1
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++|.++.+.+...+...++..++++ ..+++.||+|||+.+..+.....++.+...+..+ ...+.+.-++.+.
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~ 118 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGA-LFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGM 118 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHH
Confidence 34799999999999999999999887 7788888899999999999888887776655432 2223344455556
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 403 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~ 403 (420)
+.....+....+..|..|+++|+++.++......+|..+++.+.+.+.+.. +|+..|++.....
T Consensus 119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~----------~w~~~f~i~~~~~ 182 (426)
T PRK12307 119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY----------GWRAAFFVGLLPV 182 (426)
T ss_pred HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC----------CHHHHHHHHHHHH
Confidence 666778888889999999999999999999999999999999888887766 8999998754433
No 187
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=3.1e-10 Score=105.99 Aligned_cols=151 Identities=13% Similarity=0.158 Sum_probs=123.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCc--hhHHHHHHHHHHHHHHHhh--------hhhHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFGL--------SVNFWMA 72 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk--~~l~~~~~~~~~~~~~~~~--------~~~~~~l 72 (420)
+++|++..| ...+.-+..+...++++.+|++.||+|.| +++..+++++.+..+...+ .++.+.+
T Consensus 310 ~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f 383 (477)
T PF11700_consen 310 EVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEF 383 (477)
T ss_pred HhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHH
Confidence 578999999 88888899999999999999999999999 8998888888666665555 6788889
Q ss_pred HHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchH
Q 014686 73 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 151 (420)
Q Consensus 73 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 151 (420)
.+.-++.|++.|...+. .++.+|..|+++.+..+|++....-....+||++-+.+.+. .| +.|.
T Consensus 384 ~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~-------tg--------~~r~ 448 (477)
T PF11700_consen 384 WVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA-------TG--------SQRY 448 (477)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hC--------Cchh
Confidence 99999999999998887 99999999999999999999999999999999999999983 22 2333
Q ss_pred HHHHHHHHHHHHHHHHHhccccc
Q 014686 152 PCLCISLFAFGVTIAAFWLPETL 174 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~e~~ 174 (420)
.+....++.++.+++.+.+++++
T Consensus 449 g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 449 GFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHHHhhccchh
Confidence 33444444444445555555443
No 188
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=1.8e-09 Score=100.05 Aligned_cols=179 Identities=15% Similarity=0.091 Sum_probs=122.2
Q ss_pred chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHH
Q 014686 215 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 294 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (420)
||.+|......++.......+..+.|.|..+. +|+++.+.|...+...+...++++ ..+++.||+|||+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~l~~~i~~~-~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDV-----NGLSKTDTGIVFSCISLFSILFQP-LFGLISDKLGLKKHLLWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHH
Confidence 57788888888888777777777888888665 799999999999999999999998 788889999999998876
Q ss_pred HHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhh
Q 014686 295 GVLTIPLLTSYPYIAMLS--GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 372 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 372 (420)
.....+...........+ ....+....+..+..+.......+....+..+.. ++++...|......++|..++|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHH
Confidence 555444333221111100 0011111222233333444445555555555532 234567788888889999999999
Q ss_pred hhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 373 GGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 373 ~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.|.+.+. +|+..|++.+.+.++..++.+.
T Consensus 153 ~g~l~~~-----------~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 153 AGILFSI-----------DPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred Hhhhhcc-----------CchHHHHHHHHHHHHHHHHHHH
Confidence 9988653 6888998888877776655443
No 189
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.19 E-value=1.4e-09 Score=102.63 Aligned_cols=147 Identities=7% Similarity=-0.036 Sum_probs=103.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSV 332 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
|++..+.+...+...++..++++ ..+++.||+|+|+.+..+.++..+..+...+..... .....+.+..++.+++..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~-~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~l~gi~~g 135 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKF-IMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT--SSIAVMFVLLFLCGWFQG 135 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh-hhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccc--ccHHHHHHHHHHHHHHHh
Confidence 89999999999999999999988 788888999999999988888777776665542111 112222333344444555
Q ss_pred HHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHH-hhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 333 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA-GPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
...+.......+.+|+++|+++.|+.+....+|+.+ +|.....+.... +|+..|++.+.+.++..++..
T Consensus 136 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----------gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 136 MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN----------DWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHHHHHHHH
Confidence 555666677788899999999999999888888754 444333333222 799999988877666554444
Q ss_pred h
Q 014686 412 K 412 (420)
Q Consensus 412 ~ 412 (420)
.
T Consensus 206 ~ 206 (452)
T PRK11273 206 A 206 (452)
T ss_pred H
Confidence 3
No 190
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.18 E-value=1.3e-09 Score=103.24 Aligned_cols=148 Identities=18% Similarity=0.181 Sum_probs=118.4
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
+++++..+.|.+.+...++..++++ ..+++.||+++|+.+..+.++..+..++..+... .....+++..++.+++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQI-PVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG----GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHc-chHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH----cCchHHHHHHHHHHHh
Confidence 5789999999999999999999988 7778888899999998888777666655443221 1122345556666777
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.....|....+.++.+|+++|+++.|+.+....+|..++|.+.+.+.+.. .+|+..|++.+++.++..++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~---------~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW---------GGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------CCCCeehhhhhHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999998762 179999999888776665554
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
+.
T Consensus 216 ~~ 217 (465)
T TIGR00894 216 FV 217 (465)
T ss_pred HH
Confidence 43
No 191
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.17 E-value=2.5e-09 Score=101.49 Aligned_cols=149 Identities=11% Similarity=0.118 Sum_probs=110.0
Q ss_pred ccccccccccchhhhhHHHHH-HHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHH---hhh-hhHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAVLTRF 77 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~ 77 (420)
+++|.+.++ .++... ...++..++.++.|+++||+|||+.+.++.++.+++.+.. +.. ++.+.+.+.-+
T Consensus 251 ~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 251 RGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 467888888 999874 6678999999999999999999998877666555544332 232 45555555666
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 156 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 156 (420)
++.++.|...+. .++..+..+++.+++..++.+...++|..++++++|.+.+ ..||+. .+.+.
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~-------~~G~~~---------~f~~~ 388 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE-------AHGWPT---------FYLFS 388 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhChHH---------HHHHH
Confidence 666665655555 7888899999999999999999999999999999999998 445443 34666
Q ss_pred HHHHHHHHHHHHhcccc
Q 014686 157 SLFAFGVTIAAFWLPET 173 (420)
Q Consensus 157 ~~~~~~~~~~~~~l~e~ 173 (420)
++.++..++....++++
T Consensus 389 ~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 389 VAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 66666655555555554
No 192
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.17 E-value=6.2e-10 Score=86.66 Aligned_cols=134 Identities=17% Similarity=0.231 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhc
Q 014686 266 TGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRA 345 (420)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (420)
..++..+++. ..+++.||.+||+.+..+.....++.+......+ .........+.+.......+.......|.
T Consensus 7 ~~~~~~~~~~-~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 7 YALGQLIYSP-LSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN------ITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred ehhHHHHHHh-hHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3455666666 6677888889999988887777666655443321 11233344455556667778888899999
Q ss_pred CCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 014686 346 VDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 346 ~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
.|+++|+++.++.+....++..++|.+.+.+.+.. +++..+.+.+.+.+++.+..+. ..||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~ 140 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------GWRAPFLFLAILALAAFILLAF-LLPE 140 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------chHHHHHHHHHHHHHHHHHHhh-cCCC
Confidence 99999999999999999999999999999998776 7888888888887777666655 4444
No 193
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.17 E-value=8.3e-08 Score=86.13 Aligned_cols=330 Identities=14% Similarity=0.094 Sum_probs=173.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 96 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~ 96 (420)
.+.+.-+-.+...+..+.+.+..+|...+.=...+..++.++.++.++++|.+.=+++-.+.+++.|..... ..+ +..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THF 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHh
Confidence 455666777788888888999999998665556677788889999999999998888888999988877666 554 445
Q ss_pred chhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHH-HHhcccccC
Q 014686 97 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLH 175 (420)
Q Consensus 97 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~e~~~ 175 (420)
+++ ...+-++.+.+.++++|+..-..+.+ . ..+.|...+......++..+. ++.+|+++.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~--------~-------g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~ 200 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTT--------L-------GLSPRTTLLIMLVLPAIFLLSYFFLLPSPPT 200 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHH--------h-------CcCHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 553 35788888888889888877655553 1 223444444544444443333 344554332
Q ss_pred CCCCCCCcc-cchhHhhhhhhhhhhhhhcCCCCchhhhcc-chhHHHHHHHHHHHHhhhh-hHHHHHHHhhcCcccCCcc
Q 014686 176 RHNDDDDSC-DVSYDALESASAEVKEEEGREATPKKSLLK-NWPLMSSIIVYCVFSLHDM-AYSEIFSLWANSPKKLGGL 252 (420)
Q Consensus 176 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 252 (420)
..+.++.+. ++..++..+.+.+..+.+...+...++-++ -|++...++-.+...+... ......+...... ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~----~~ 276 (402)
T PF02487_consen 201 NRPYQESESEDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPN----SF 276 (402)
T ss_pred cCCCcccCCCCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCc----cC
Confidence 222111111 111011000000000001111112221111 1222222222222211111 1122222222111 01
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSV 332 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
.-...+.......+.++..+++- ....+ |+++.+.+.....+..+..++-.+.... ...+.+++..+.-|..++
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRS-S~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fi---psi~ivf~lif~eGLlGG 350 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRS-SLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFI---PSIWIVFVLIFYEGLLGG 350 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhc-ceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHhhh
Confidence 11233444555556666555543 11111 1222222222222222222222222211 223344455566667777
Q ss_pred HHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 333 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..+......+.+..|+++|..++|.......+|..++..++-.+-
T Consensus 351 a~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 351 ASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 777777777788899999999999999888888887776654443
No 194
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.17 E-value=5.1e-10 Score=103.17 Aligned_cols=120 Identities=17% Similarity=0.137 Sum_probs=105.7
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+|.|.++.+ .|.+.+...++..+..++.|++.||+|+|+.+..+....+++.+..+.+++.+.+++..++.|++
T Consensus 233 ~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 306 (382)
T PRK11128 233 QAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGT 306 (382)
T ss_pred HHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 456778777 89999999999999999999999999999999999999999888888899999999999999999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHH-HHhHHHHHHHHHHHhHhcc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~ 129 (420)
.+...+. ..++.+. +++++++..+..+ ...++|..+||.++|.+.+
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 7888886 5666788888876 6677888999999999998
No 195
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.16 E-value=1.4e-10 Score=107.33 Aligned_cols=121 Identities=22% Similarity=0.226 Sum_probs=97.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHH--HHHhh--hhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN--TLFGL--SVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l 78 (420)
+++|.++++ .+...+...++..++.++.|+++||+|||+.+.....+..+.. ....+ .++.+.+....++
T Consensus 248 ~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 248 QTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 567778778 8999999999999999999999999999998775554444333 22222 2466777778888
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHH-HHHhHHHHHHHHHHHhHhcc
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~~~l~~ 129 (420)
.|++.+...+. .+++.|.+|+++|++++++. +.+..+|..++|.+++.+.+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 89887777776 99999999999999999984 56677899999999999998
No 196
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.15 E-value=6.3e-07 Score=83.04 Aligned_cols=341 Identities=9% Similarity=0.080 Sum_probs=176.3
Q ss_pred hHHHHHHHHHHHHHh-hhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh----hh------------------------
Q 014686 18 AGYVGSSFMFGRALT-SVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----VN------------------------ 68 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~-~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~----~~------------------------ 68 (420)
..++-+...+...+. .++.+++++|++|++++-.....+....+++++. ++
T Consensus 45 i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~ 124 (472)
T TIGR00769 45 IPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIA 124 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHH
Confidence 788888887777776 8999999999999999988777777766666654 11
Q ss_pred ---HHHHHHHHHHhhhhccchhh-h-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCcccccccc
Q 014686 69 ---FWMAVLTRFLLGSLNGLLGP-I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 143 (420)
Q Consensus 69 ---~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~ 143 (420)
.|...+.-+...+-+..... . ..++.|.++.+|-.|.+++...+.++|.++++.+..++.+.....+..
T Consensus 125 ~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~------ 198 (472)
T TIGR00769 125 ILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPG------ 198 (472)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc------
Confidence 12222333334443333333 4 788999999999999999999999999999999988887421111000
Q ss_pred ccCccc----hHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHH
Q 014686 144 FGKFPY----FLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 219 (420)
Q Consensus 144 ~~~~~~----~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (420)
...| .....+.++..++...+.+++.+....+++..+.+ + .+++++.+....+..+.++|+|.++
T Consensus 199 --~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~-~~~k~k~k~~~~es~k~i~~S~yL~ 267 (472)
T TIGR00769 199 --VDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPA--------L-KEKKVKPKMSTMESLKFLVSSPYIL 267 (472)
T ss_pred --cChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchh--------h-ccccCCCCCCHHHHHHHHHhCHHHH
Confidence 1122 11222333333333334444432221111100000 0 0000000111234567788999887
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 014686 220 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (420)
...+...+.+......+...-....+.. .+.-.. ..-.|......++..++.+++. +++.||.|-+....+.-+...
T Consensus 268 ~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~-~~f~g~~~~~~gi~tl~~~l~~-~~l~~~~Gw~~~a~i~Pii~l 344 (472)
T TIGR00769 268 DLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEY-SAFMGDFSTWTGVVSVTMMLLS-GNVIRKYGWLTAALITPLVML 344 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHH
Confidence 7666655554333222211111111110 000011 2234555666677777777745 788888887666655544444
Q ss_pred HHHHHHH---HHHHhhhh--------HHHHHHHHHH---HHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH-HH
Q 014686 300 PLLTSYP---YIAMLSGF--------GLAFLLNCAS---VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM-SL 364 (420)
Q Consensus 300 ~~~~~~~---~~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~ 364 (420)
+....+. ........ +......+.. ...-..-.......--..---.++|.|.++-+....+. .+
T Consensus 345 it~~~Ff~~~~f~~~~~~~~~~l~~~pl~l~v~~g~~~~v~~k~~kYsl~dp~kEmly~pld~e~K~K~Ka~iD~v~~r~ 424 (472)
T TIGR00769 345 LTGVAFFSLIFFGGPAAPLVAKLGMTPLLLAVYVGAIQNILSKSTKYSLFDATKEMAYIPLDEEQKVKGKAAIDVVAARL 424 (472)
T ss_pred HHHHHHHHHHHhcccchhhhhhhccChHHHHHHHHHHHHHHHHHhhhccccHHHHHhcccCCHHHHHHhHhhhhhhhhhh
Confidence 4222211 11110000 0000011110 11111111111122222222357899999999888776 68
Q ss_pred HHHHhhhhhhHHHH
Q 014686 365 FKAAGPAGGGALFS 378 (420)
Q Consensus 365 g~~~g~~~~g~l~~ 378 (420)
|-..|..+...+..
T Consensus 425 Gks~gs~i~~~l~~ 438 (472)
T TIGR00769 425 GKSGGALIQQGLLV 438 (472)
T ss_pred hhHHHHHHHHHHHH
Confidence 88877776655433
No 197
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.15 E-value=4.4e-10 Score=103.45 Aligned_cols=144 Identities=10% Similarity=0.044 Sum_probs=113.2
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|.+..+.+.+.+...++..++++ ..+++.||+|||+.+..+..+..++.++.....+ ...+.+..++.+++.
T Consensus 25 ~g~s~~~~g~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~ 97 (379)
T TIGR00881 25 IGLSKTDLGLLLSSFSIAYGISKF-VMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS------LWVMAALWALNGIFQ 97 (379)
T ss_pred hCCCHhHHHHHHHHHHHHHHhhhh-hhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHhhc
Confidence 799999999999999999999988 7788888899999999998888777776655432 222334445555666
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhh-hhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA-GGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~-~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
....+...++..|.+|+++|+++.++.+....+|..++|. +.+.+.+.. +|+..|++.+.+.++..++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 98 GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY----------SWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC----------CchhHHHHHHHHHHHHHHHH
Confidence 6677888899999999999999999999999999999994 555555554 78889988887776655554
Q ss_pred hh
Q 014686 411 FK 412 (420)
Q Consensus 411 ~~ 412 (420)
+.
T Consensus 168 ~~ 169 (379)
T TIGR00881 168 FL 169 (379)
T ss_pred he
Confidence 43
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=99.11 E-value=9.7e-10 Score=105.38 Aligned_cols=135 Identities=21% Similarity=0.135 Sum_probs=102.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHhhhhccchhhh-Hhhhhhhchh
Q 014686 23 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFRE 99 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~ 99 (420)
....+....+.++.+++.||+|||+++..+.++.+++.++..+.++. +...+.-++.+++.+...+. ..+..|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456667788889999999999999999999988888887776543 44445555666666665665 8899999999
Q ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccC
Q 014686 100 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 175 (420)
Q Consensus 100 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~ 175 (420)
+.|++++++.+....+|.+++|.+.+ +.+ .++..++.+.+...++..+..+++||++.
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 99999999999999999999999988 432 12233445555666665566678888654
No 199
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.10 E-value=3.2e-08 Score=90.13 Aligned_cols=146 Identities=12% Similarity=0.023 Sum_probs=113.4
Q ss_pred ccCCchhh-HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 251 GLNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 251 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
++|++..+ .|.+.+....+..+..+ .++++.||+|.|+++..+.+.-.+..++.++..+ ...+.+.-++.|+
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qI-p~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S------l~~L~i~R~llGv 127 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLV-PVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS------VWHMQLMEVFYSV 127 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHH-HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 38999999 99999999999999987 8889999999999999999888888777776543 3345566666777
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+.+... ....++.+.+|+++|+++.|+.+....+|.++++++.+.+ ...+-. .+....++......++.++
T Consensus 128 aEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr-------~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 128 TMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWI-------SYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred HHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCch-------hHHHHHHHHHHHHHHHHHH
Confidence 777777 8888999999999999999999999999999999999994 333111 3444444444445555555
Q ss_pred Hhh
Q 014686 410 TFK 412 (420)
Q Consensus 410 ~~~ 412 (420)
.++
T Consensus 199 a~~ 201 (511)
T TIGR00806 199 ALF 201 (511)
T ss_pred HHh
Confidence 544
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=99.10 E-value=2.4e-08 Score=93.51 Aligned_cols=150 Identities=9% Similarity=-0.070 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 014686 218 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 297 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
+....+.++...+.........|.+ ++++|.++.+.+...+...++..++++ ..+.+.||+|+|+.+..+..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i------~~~~~~s~~~~gl~~~~~~~g~~i~~~-~~g~l~dr~G~r~~l~~g~~~ 100 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF------QQAFTLTNFQAGLIQSAFYFGYFIIPI-PAGILMKKLSYKAGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHhCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcHHHHHHHHHH
Confidence 3444455555555555555555544 233899999999999999999999988 677888888999999999988
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 298 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..++.++....... .....+.+..++.+.+.....+..+.++.+..|++++...+++.+....+|..++|.+++.+.
T Consensus 101 ~~~~~~l~~~~~~a---~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEI---MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887664322111 112234445555566667777787888888766666667899999999999999999987765
No 201
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.09 E-value=1.1e-08 Score=97.46 Aligned_cols=156 Identities=8% Similarity=-0.054 Sum_probs=114.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH------hhhhHHHHHHHHHH
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM------LSGFGLAFLLNCAS 324 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 324 (420)
+++.+..+.+...+...++..++++ +.+++.||+|||+.+..+..+..++.+....... .+.......+++.-
T Consensus 49 ~~~~~~~~~~~~~s~~~ig~~~~~~-~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 127 (479)
T PRK10077 49 SESAANSLLGFCVASALIGCIIGGA-LGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYR 127 (479)
T ss_pred cccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHH
Confidence 3588899999999999999999988 7788899999999999988887766554433110 01112233344555
Q ss_pred HHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHH
Q 014686 325 VVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEA 404 (420)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~ 404 (420)
++.+++.....+...++++|.+|+++||++.++.+....+|..+++.+.+.+......... ...+|+..|++.++..+
T Consensus 128 ~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 128 IIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWL--NTDGWRYMFASEAIPAL 205 (479)
T ss_pred HHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc--ccCChHHHHHHHHHHHH
Confidence 6777788888999999999999999999999999999999999888766655432111100 01289999998877776
Q ss_pred HHHHH
Q 014686 405 IGVLM 409 (420)
Q Consensus 405 ~~~~~ 409 (420)
+..+.
T Consensus 206 ~~~~~ 210 (479)
T PRK10077 206 LFLML 210 (479)
T ss_pred HHHHH
Confidence 66544
No 202
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.08 E-value=1.8e-09 Score=90.90 Aligned_cols=121 Identities=15% Similarity=0.226 Sum_probs=101.0
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh-------hhHHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-------VNFWMAV 73 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~-------~~~~~l~ 73 (420)
+++.+|.|.+| ...+.++..+|..+ +++.|.+.||+|+|.++.++.+...++......+ +++|.+.
T Consensus 28 Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 28 LKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred HHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 36788999999 99999999999886 5889999999999999999999999999887663 4678888
Q ss_pred HHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
+..++.|.+.+....+ .....+.+| ++||++.++.-...+++..+-..+...+.+
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 8888888876666554 566667887 579999999999999998887777666655
No 203
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=9.4e-10 Score=97.17 Aligned_cols=122 Identities=17% Similarity=0.251 Sum_probs=112.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+++|++..| ...+.-...+..+++++++|+|.||+|.|+++..++++..+.++..-+...-..+.+.-.+.|..
T Consensus 281 ~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s 354 (438)
T COG2270 281 ADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTS 354 (438)
T ss_pred HHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHh
Confidence 588999999 99999999999999999999999999999999999999999888887777766777778899999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 130 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 130 (420)
.|..... .++..+..|+++-++.+|+++...-.+..+||.+-+.+.+.
T Consensus 355 ~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 355 LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHH
Confidence 8888776 99999999999999999999999999999999999999983
No 204
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.08 E-value=2.3e-08 Score=95.61 Aligned_cols=157 Identities=12% Similarity=-0.029 Sum_probs=113.1
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
...+..+.+.+.+...++.+++++ ..+++.||+|||+.+..+.++..++.++...............+.+.-++.+++.
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~-~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 129 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQL-FFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGI 129 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHH
Confidence 345666778888888899999988 7888899999999998888877777665544322111111234555566667777
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhcc---C----------CCCCCCchHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL---D----------ASFLPGSQMVFFV 398 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~---~----------~~~~~g~~~~f~~ 398 (420)
....+....+.+|.+|+++|+++.++.+....+|..+++.+...+.....+.. + .....+|+..+.+
T Consensus 130 g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 130 GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 88889999999999999999999999999999999999998887665332100 0 0001279999977
Q ss_pred HHHHHHHHHHH
Q 014686 399 LNVVEAIGVLM 409 (420)
Q Consensus 399 ~~~~~~~~~~~ 409 (420)
.++..++..++
T Consensus 210 ~~ip~~i~~~~ 220 (502)
T TIGR00887 210 GAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHH
Confidence 76666655444
No 205
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=2.6e-08 Score=93.44 Aligned_cols=146 Identities=10% Similarity=-0.103 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhHHHHH
Q 014686 259 VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--FGLAFLLNCASVVKNLLSVSIIT 336 (420)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 336 (420)
.+..++...++..++++ +.+++.||+|||+.+..+..+..++.+...+.++... ......+.+.-++.+++.....+
T Consensus 65 ~~~~~~~~~~~~~ig~~-~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~ 143 (432)
T PRK10406 65 TAGVFAAGFLMRPIGGW-LFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYG 143 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHh
Confidence 34444554555557777 7889999999999999999888887777655442211 11222344555566677777889
Q ss_pred HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHH
Q 014686 337 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGV 407 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~ 407 (420)
...++++|..|+++||++.++.......|..+++.+...+.....+...+ ..||+.+|++.++..++..
T Consensus 144 ~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~~gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 144 TSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELR--EWGWRIPFALGAVLAVVAL 212 (432)
T ss_pred hHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh--ccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999888777888888877665554322110000 0289999998777666553
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=99.07 E-value=1.1e-09 Score=102.71 Aligned_cols=121 Identities=19% Similarity=0.181 Sum_probs=89.1
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHH-HH---hhhhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LF---GLSVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~-~~---~~~~~~~~l~~~r~l 78 (420)
+.+|.+.++ .++....+.++..++.++.|+++||+|||+++..+..+..+... .. ...+++..+.+..++
T Consensus 267 ~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK15075 267 TVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELW 340 (434)
T ss_pred HhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 346777777 88888889999999999999999999999998776544433221 11 112344444455556
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHH-HhHHHHHHHHHHHhHhcc
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~ 129 (420)
.|++.+...+. ..++.|.+|+++|++++++... +..++..++|.+.+++.+
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 66666666665 7789999999999999998644 444567789999999998
No 207
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.06 E-value=1.1e-09 Score=102.99 Aligned_cols=112 Identities=16% Similarity=0.220 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHhhhhccchhhh-Hhhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 95 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 95 (420)
.+++.+...++..++.+++++++||+|||+++..+..+..++.+...+. ++.+.+++..++.|++.+...+. .++++|
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVAD 338 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6778888899999999999999999999999999988888887777665 46677777888889988887776 888888
Q ss_pred hch-------hhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 96 IFR-------EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 96 ~~~-------~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
..+ +++++..+++.+....+|..+++.+.+.+.+
T Consensus 339 ~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 339 TVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 865 4567999999999999999999999999987
No 208
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.05 E-value=1.7e-08 Score=106.35 Aligned_cols=186 Identities=15% Similarity=0.068 Sum_probs=116.4
Q ss_pred hhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Q 014686 211 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 290 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (420)
.+++++.++.+....++..+........++.+...........-+....++..+...+..++.++ +.+++.||++||++
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~-~~G~laDr~~rk~~ 84 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSA-LAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhh-hHHhhhhhccHHHH
Confidence 46777777766666555544432222121211111101111112234567777777777778777 78888999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhh
Q 014686 291 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 370 (420)
+........+........... .....+++..++.+.+.....|...+++.+.+|++++++++|+.++..++|..+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~---~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp 161 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHL---NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGT 161 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence 644222222221111111110 12334555666667777888899999999999999999999999999999999999
Q ss_pred hhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 371 AGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 371 ~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.++|.+.+.. +|+..|.....+.+++.++.
T Consensus 162 ~l~g~l~~~~----------~~~~~~~~~~~~~~~~~~~~ 191 (1140)
T PRK06814 162 IIGGLATISG----------NFVILVALLMGIAVLGWLAS 191 (1140)
T ss_pred HHHHHHHhcc----------ccHHHHHHHHHHHHHHHHHH
Confidence 9999999876 78888854444444444433
No 209
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.03 E-value=1.2e-08 Score=90.15 Aligned_cols=147 Identities=16% Similarity=0.071 Sum_probs=116.0
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++++|+.|.+++.++..+.+.+.++ ..+.+.||+|.|+....+.++..+-.+...+....++. +. ++...++.+.
T Consensus 42 ~~~~LS~~q~~ll~aiPil~GallRl-~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~--~~-ll~~gll~G~ 117 (417)
T COG2223 42 SDFGLSEGQKGLLVAIPILVGALLRL-PYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPST--WQ-LLVIGLLLGL 117 (417)
T ss_pred cccCCCHHHHHHHHHHHHHHhHHHHH-HHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCch--HH-HHHHHHHHhc
Confidence 45899999999999999999999998 66778888899999999888877777777666544432 22 3333333333
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC---chHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG---SQMVFFVLNVVEAIG 406 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g---~~~~f~~~~~~~~~~ 406 (420)
.++.+......+++.+|||++|.+.|+.. .+++|..+...+...+.... + |+.+..+.....++.
T Consensus 118 -~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~----------g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 118 -AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF----------GFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred -ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHH
Confidence 34556677788899999999999999998 99999999999999998887 6 788888887777777
Q ss_pred HHHHhh
Q 014686 407 VLMTFK 412 (420)
Q Consensus 407 ~~~~~~ 412 (420)
.+..++
T Consensus 186 ~v~~~~ 191 (417)
T COG2223 186 AVLAWL 191 (417)
T ss_pred HHHHHH
Confidence 666655
No 210
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.02 E-value=3.6e-09 Score=92.42 Aligned_cols=146 Identities=19% Similarity=0.224 Sum_probs=124.5
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
...+-+..++|.++....+..++.+.+++..+ ||+|+|..+..+...+....+++.+..+.+ .+++.=.+-+.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~-~~iGy~ipm~~Gl~vmf~sTilFafg~sy~------~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLI-DRIGYKIPMVAGLFVMFLSTILFAFGNSYP------MLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhH-HHhccccHHHHHHHHHHHHHHHHHHcchhH------HHHHHHHHhhh
Confidence 34667788999999999999999999555554 578999999999999999988888765433 45566667777
Q ss_pred hhHHHHHHHHHHhhhcCCcch-hhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQ-RGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~-~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
+.........+++++.+|+++ |++++|+.-.+..+|-.+||.++|.+||.. |++.+|+++++++++...
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~----------Gk~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA----------GKSAPFLVLAIVLLLDGA 241 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc----------CCcCcHHHHHHHHHHHHH
Confidence 788888888899999998765 799999999999999999999999999998 899999999999999887
Q ss_pred HHhh
Q 014686 409 MTFK 412 (420)
Q Consensus 409 ~~~~ 412 (420)
+.++
T Consensus 242 L~l~ 245 (464)
T KOG3764|consen 242 LQLL 245 (464)
T ss_pred HHHh
Confidence 7766
No 211
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.02 E-value=3.3e-09 Score=98.07 Aligned_cols=121 Identities=13% Similarity=0.098 Sum_probs=92.5
Q ss_pred ccccccccccchhhhhHHHHHHHH-HHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh------hhhHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL------SVNFWMAVLT 75 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~ 75 (420)
+|.|.++++ .|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...+...
T Consensus 236 ~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 236 VDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 467889888 999988876 466778899999999999999998877665333332221 1233444455
Q ss_pred HHHhhhhccchhhh-Hhhhhhhchh-hhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 76 RFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 76 r~l~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
..+.+++.+...+. .+.+.+..++ +++++.+++.+...++|..+||.++|.+.+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666777776665 7777777765 889999999999999999999999999998
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.01 E-value=2.4e-07 Score=89.85 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=97.6
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHHHHHHHhhhhh--------HHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN--------FWMAV 73 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~~~~--------~~~l~ 73 (420)
+.+|.++++ ...+...+....-+..++.|.++|+ +||++.+.++.++..++..+.+++.. ....+
T Consensus 16 ~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 16 NFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 456777777 7777777777778888999999996 59999999999999999888776421 22355
Q ss_pred HHHHHhhhhccchhhh-Hhhhhhhchhh---hhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 74 LTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 74 ~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
++-.+..+|.|..-|+ .+...|.++++ +|.+.+.++..+.++|+.+++++..++.+
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~ 149 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRG 149 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666777789999998 99999998754 46788899999999999999999988875
No 213
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=3.8e-08 Score=104.05 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=112.5
Q ss_pred hhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Q 014686 211 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 290 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (420)
..++++.++...+..++..+...........+....+ +..-+....++..++..+...++++ ..+++.||+|||++
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~-~~G~l~Dr~grk~~ 79 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY---DGSEQVILTAIVNALFLLPFLLLSS-PAGFLADKFSKNRV 79 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc---CcccHHHHHHHHHHHHHHHHHHHhh-hHhhhcccccHHHH
Confidence 4567777777776666655444333333333332221 1222344567777887888888877 77888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhh
Q 014686 291 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGP 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~ 370 (420)
+..+.++..+..++..+..... ....+++..++.+++.....+...+++.+.+|+++|++++|+.+....+|..+||
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~ 156 (1146)
T PRK08633 80 IRIVKLFEVGLTLLIVLAYYLG---WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGT 156 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHH
Confidence 9888766555544443332211 1233445555566777778888899999999999999999999999999999999
Q ss_pred hhhhHHHHh
Q 014686 371 AGGGALFSW 379 (420)
Q Consensus 371 ~~~g~l~~~ 379 (420)
.+++.+.+.
T Consensus 157 ~l~~~l~~~ 165 (1146)
T PRK08633 157 ALFSFLFES 165 (1146)
T ss_pred HHHHHHHHh
Confidence 999999876
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.98 E-value=7.4e-08 Score=89.59 Aligned_cols=148 Identities=18% Similarity=0.192 Sum_probs=129.6
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
..++++..+-+.+++....+.+++++ -++++.+|+|.|+++..+.++..+..++.++...... + .+++.-++.|+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~i-P~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~---~-~~~~~R~lqGl 140 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQI-PGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF---Y-LLLVLRFLQGL 140 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHc-CcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc---h-hhHHHHHHhHH
Confidence 35889999999999999999999988 6778888899999999999999999988888764332 2 45666777778
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh-hhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW-AQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~-~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
..+...|....+.++-.|+++|++..++.....++|.+++-++.|.+-+. . ||+.+|++.+.+.++..+
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~----------GW~sifY~~g~~g~i~~~ 210 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL----------GWPSIFYVFGIVGLIWFI 210 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC----------CCchHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999998 4 999999999999888877
Q ss_pred HHhh
Q 014686 409 MTFK 412 (420)
Q Consensus 409 ~~~~ 412 (420)
+.+.
T Consensus 211 ~w~~ 214 (466)
T KOG2532|consen 211 LWFL 214 (466)
T ss_pred HHHH
Confidence 6654
No 215
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.98 E-value=5.7e-10 Score=99.37 Aligned_cols=150 Identities=14% Similarity=0.058 Sum_probs=125.9
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+.++.++...|++.....+..++.++ +.+++.||++|++++..+..+-..+.+...+. ...+.+.+.=.+.+.
T Consensus 61 ~~fni~~s~~Gll~~vf~v~~~i~sP-l~gyLadryNR~~v~~vG~~iW~~Av~~~~fs------~~Fwq~~l~R~~vGi 133 (493)
T KOG1330|consen 61 TYFNISDSELGLLQTVFIVVFMIASP-LFGYLADRYNRKRVIAVGIFIWTLAVFASGFS------NHFWQVLLCRGFVGI 133 (493)
T ss_pred HhcCCCchhccchhHHHHHHHHHHHH-HHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH------HHHHHHHHHHHHhcc
Confidence 33789999999999999999999988 88999999999999999888877776665553 223345555666778
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+.....|..+++++|.+|.++|++++++.+....+|..+|-..++.+.+.. +.|++.|.+.+++.++..++
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~---------~~Wr~af~~~avl~vi~~~L 204 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT---------FWWRWAFRGSAVLGVIVGLL 204 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc---------cceEEEEEeehHHHHHHHHH
Confidence 899999999999999999999999999999999999999999888888877 24999999999998888777
Q ss_pred Hhhhhhh
Q 014686 410 TFKPFLA 416 (420)
Q Consensus 410 ~~~~~~~ 416 (420)
... +.+
T Consensus 205 ~~~-f~~ 210 (493)
T KOG1330|consen 205 VFL-FVR 210 (493)
T ss_pred HHh-hcc
Confidence 665 443
No 216
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.98 E-value=8.6e-08 Score=89.04 Aligned_cols=165 Identities=15% Similarity=0.108 Sum_probs=115.4
Q ss_pred HHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chH-HHHHHHHHH
Q 014686 224 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-----GPI-MVARIAGVL 297 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~ 297 (420)
.++.............|.|+.+ .|++.+++|.+...... .+.++ +.+.+.||+ ||| +.+..+...
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~------~g~~~~~ig~~~~~~~~--~~~~~-l~g~~~Dr~~~~~~g~rr~~l~~~~~~ 77 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTV------EGLDIQTIGFFSLVGQA--YIFKF-LWAPLMDRYTPPLLGRRRGWLLLTQVG 77 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHH--HHHHH-HHHHHHHcccccCCCcchhHHHHHHHH
Confidence 3444445555556677888865 59999999998666443 45556 555666666 555 467776666
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 298 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..++.....+..... ..+ .+....++.+.+.....+...+++.|..|+++|+++.++......+|..+++.+.+.+.
T Consensus 78 ~~l~~~~l~~~~~~~--~~~-~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 78 LAASIAAMAFCPPHA--ALW-PLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HHHHHHHHHhcCccc--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 666555554432111 122 23333334456667778889999999999999999999999988999999999999888
Q ss_pred HhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 378 SWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 378 ~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+.. .||+..|++.+++.++..+.
T Consensus 155 ~~~---------~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 155 DRV---------LGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred hcc---------cCHHHHHHHHHHHHHHHHHH
Confidence 753 18999999988877666554
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.98 E-value=6.1e-08 Score=88.14 Aligned_cols=142 Identities=15% Similarity=0.202 Sum_probs=109.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
.+-.+...|........+.++.- +...++.+|+|+.+++..++.+...-++.+....+ ++.+...-++-+...
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~-ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n------~W~vLPieilqgit~ 473 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFY-FFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN------PWMVLPIEILQGITH 473 (618)
T ss_pred cCCcceeeeehhhhhccchHHHH-HHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC------chheeeHHHHHHHHH
Confidence 56666667766666666666664 47778888899999988888877776666655432 223445556666777
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHH-HHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGM-SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
..++....++++...||+.+.+++|+..... .+|-.+|.+++|.+.++. +-+..|..+++.+++..++.
T Consensus 474 aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f----------g~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 474 ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF----------GARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee----------hhHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999988765 899999999999999998 77888888887777665554
No 218
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.98 E-value=4.8e-08 Score=89.21 Aligned_cols=153 Identities=16% Similarity=0.122 Sum_probs=101.7
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHH-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-----GPIMVA-RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASV 325 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (420)
.|+|..+.|..... .+...+ .+ +.+.+.||+ |||+.. ..+.+...+......+.... .....+....+
T Consensus 18 ~g~s~~~~g~~~~~-~~~~~~-~~-~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~---~~l~~l~~~~~ 91 (356)
T TIGR00901 18 KNVSLKTIGFFSLV-GLPYSL-KF-LWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS---TDLPLLAGLAF 91 (356)
T ss_pred cCCCHHHHHHHHHH-HHHHHH-HH-HHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc---hhHHHHHHHHH
Confidence 69999999998655 444444 55 444555554 677764 45555555554444333221 11222333333
Q ss_pred HHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHH
Q 014686 326 VKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAI 405 (420)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~ 405 (420)
+.+.......+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..+... ....+|+..|++.+++.++
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~--~~~~~wr~~f~i~ai~~l~ 169 (356)
T TIGR00901 92 LIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT--GLITLWGYIFFWTALLILP 169 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--ccccccHHHHHHHHHHHHH
Confidence 44455666778888999999999999999999999999999999999999988763111 0111499999998887777
Q ss_pred HHHHHhh
Q 014686 406 GVLMTFK 412 (420)
Q Consensus 406 ~~~~~~~ 412 (420)
..+..++
T Consensus 170 ~~~~~~~ 176 (356)
T TIGR00901 170 GLLVTLF 176 (356)
T ss_pred HHHHHHH
Confidence 6655443
No 219
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.94 E-value=1.1e-07 Score=88.49 Aligned_cols=165 Identities=13% Similarity=0.031 Sum_probs=111.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH----hhchHHHHHHH-HHHHHHHHHHHHHHHHhh----------hhHH
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLER----ILGPIMVARIA-GVLTIPLLTSYPYIAMLS----------GFGL 316 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~ 316 (420)
+|.+....+.+.....+...+.++ +.++++| |+|||+..... .....++..++++..... ....
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~P-i~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~ 112 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQP-LVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPR 112 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHh-HeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhH
Confidence 789999999999999999999988 5666676 58998887765 444445545554433211 0001
Q ss_pred -HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchh--hHHhhHHHHHHHHHHHHhhhhhhHH--HHhhh---hccCCCC
Q 014686 317 -AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQR--GAANGIAMTGMSLFKAAGPAGGGAL--FSWAQ---KRLDASF 388 (420)
Q Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~g~~~~g~l--~~~~~---~~~~~~~ 388 (420)
.........+..+......+...+++.|..|+++| +.+.+..+...++|+.+|+.+++.. .+... .......
T Consensus 113 ~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~ 192 (477)
T TIGR01301 113 AIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVS 192 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccc
Confidence 11122222233445566777788999999998865 6899999999999999999999875 22211 1111111
Q ss_pred CCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 389 LPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 389 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
..+++..|++.+++.+++.++... ..||+
T Consensus 193 ~~~~~~~F~i~a~~l~i~~l~t~~-~v~E~ 221 (477)
T TIGR01301 193 CANLKSCFLIDIILLAILTYIALS-AVKEN 221 (477)
T ss_pred cchHHHHHHHHHHHHHHHHHHHee-eeecc
Confidence 226788999999888888888776 55553
No 220
>PRK09848 glucuronide transporter; Provisional
Probab=98.93 E-value=2.1e-08 Score=94.61 Aligned_cols=112 Identities=16% Similarity=0.123 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhhhhccchhhh-Hhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYAC 94 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 94 (420)
.++......++..++.++++++.||+|+|+++..+.++..++.+...+.+ +++.+++..++.|+|.+...+. .++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~ 345 (448)
T PRK09848 266 TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEA 345 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444545677888999999999999999999999988888877776643 6677777788899998888777 88888
Q ss_pred hhchhh-------hhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 95 EIFREE-------HQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 95 ~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
|..|++ ++|..++..+....+|..+|+.+.+.+.+
T Consensus 346 ~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 346 DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888754 35888999999999999999999998876
No 221
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.92 E-value=1.2e-08 Score=99.47 Aligned_cols=162 Identities=12% Similarity=-0.001 Sum_probs=123.1
Q ss_pred cCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Q 014686 248 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG-------------- 313 (420)
Q Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 313 (420)
..++++++..+.|.+.+...++..+..+ ...++.||.+|++.+..+.++..++.+++.+.+...+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i-~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLII-FVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHH-HHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 3455899999999999999999999988 5667777889999999999998888877765431100
Q ss_pred -------------------------------hHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH
Q 014686 314 -------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 362 (420)
Q Consensus 314 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 362 (420)
...+..+++.-++.+++.....+...+++.|.+|+++|+.+.|+.+...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 1124455667778888888889999999999999999999999999999
Q ss_pred HHHHHHhhhhhhHHHHhhhhccC-----------CCC-CCCchHHHHHHHHHHHHHHHHH
Q 014686 363 SLFKAAGPAGGGALFSWAQKRLD-----------ASF-LPGSQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 363 ~~g~~~g~~~~g~l~~~~~~~~~-----------~~~-~~g~~~~f~~~~~~~~~~~~~~ 410 (420)
.+|..+|+.+++.+.+...+... .+. .++|+..|++.+++.++..+..
T Consensus 218 ~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 218 VFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred HhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876532110 000 1136677888777776655443
No 222
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.91 E-value=6.5e-09 Score=97.98 Aligned_cols=155 Identities=9% Similarity=-0.046 Sum_probs=119.2
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh----------hhHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 72 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~----------~~~~~l 72 (420)
+++|.++.+ .|.+.+...++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+..
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 467888888 9999999999999999999999999999999999999999888665321 333445
Q ss_pred HHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccc-cccCccch
Q 014686 73 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES-LFGKFPYF 150 (420)
Q Consensus 73 ~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~-~~~~~~~~ 150 (420)
...-++.+++.+..... ..++.+..|++++++.+++.....++|..+++.+++.+.+ .+|-.. .+ +.-|.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~-------~~g~~~~~~-~~~~~ 426 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME-------TIGITCDNS-NNLWL 426 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH-------HcCCCcccc-cchHH
Confidence 55577888887776555 9999999999999999999999999999999999999998 444221 12 22233
Q ss_pred HHHHHHHHHHHHHHHHHHhccc
Q 014686 151 LPCLCISLFAFGVTIAAFWLPE 172 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~e 172 (420)
...+..+..++.+...+.+|+
T Consensus 427 -~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 427 -LILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred -HHHHHHHHHHHHHHHHHhCCC
Confidence 233444444444445567886
No 223
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.90 E-value=2.6e-08 Score=90.17 Aligned_cols=185 Identities=13% Similarity=0.044 Sum_probs=140.3
Q ss_pred hcc-chhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHH
Q 014686 212 LLK-NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIM 289 (420)
Q Consensus 212 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 289 (420)
.++ .|.++.....-+.--+.+.+....+..|++...... +|+|++++..+++.++...-...+ +++|+.|| .|+|+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~i-~GG~laDr~LG~~~ 93 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTPI-IGGWLADRVLGTRR 93 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHHH-HHHHHHHHhcchhH
Confidence 344 445566666666666777777788888888775444 789999998888887777766656 78888887 69999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc--hhhHHhhHHHHHHHHHHH
Q 014686 290 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD--QRGAANGIAMTGMSLFKA 367 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ 367 (420)
.+..+.++..++.+.+...... ....+.+...+...+.+.+=+....++.|.+|++ +|-.++++.....++|+.
T Consensus 94 tI~lGail~~iGh~~L~~~~~~----~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl 169 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSVS----GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL 169 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccc----cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH
Confidence 9999999999998887665300 0112333333334566777788889999988754 467778888888899999
Q ss_pred HhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 368 AGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 368 ~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
++|.+.+++.++. ||...|...++-+.++.+..+.
T Consensus 170 ~~p~i~~~~~~~~----------g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 170 IAPIITGLLAINY----------GWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred HHHHHHHHHHHhh----------CHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 8999999999999888777665
No 224
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.3e-08 Score=84.82 Aligned_cols=122 Identities=20% Similarity=0.258 Sum_probs=96.5
Q ss_pred cccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHH-HHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 2 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV-VIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 2 ~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
++.||+|+.+ .+.+.+.-..-.++.+++.|.++||+|++...+.+..+. .++-....++ ++.=.++..+.|
T Consensus 292 ~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lG 363 (459)
T KOG4686|consen 292 QKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLG 363 (459)
T ss_pred HHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHh
Confidence 5789999999 899999988889999999999999999998887665444 3333333332 222334556778
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcccc
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 131 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 131 (420)
+........ ...++...|+++.|++.+..+...++|..+.|++++.+.+..
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD 415 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC
Confidence 876665554 667788889999999999999999999999999999999844
No 225
>PTZ00207 hypothetical protein; Provisional
Probab=98.90 E-value=4.7e-07 Score=86.29 Aligned_cols=149 Identities=17% Similarity=0.096 Sum_probs=99.5
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+++|++..+.+.+.+.. ......++ ..+++.||+|+|+++.++.++..++.+...+............+.+...+.+.
T Consensus 55 ~~lgls~~~l~~i~svg-~~~g~~~l-p~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 55 ARYNLTQRDLSTITTVG-IAVGYFLL-PYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHhCcCHHHHHHHHHHH-HHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 34899999999888763 33334444 56899999999999999999999888877664221000122223333444445
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+.....+.......+.+| ++||++.|+......+|+++.+.+...+.+. +++..|++.+.+.++..++
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-----------~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-----------NTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hHHHHHHHHHHHHHHHHHH
Confidence 555566666677777776 8899999999999999998655555544431 4556677777666665554
Q ss_pred Hhh
Q 014686 410 TFK 412 (420)
Q Consensus 410 ~~~ 412 (420)
...
T Consensus 201 ~~~ 203 (591)
T PTZ00207 201 AIV 203 (591)
T ss_pred HHh
Confidence 443
No 226
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.3e-07 Score=78.34 Aligned_cols=352 Identities=12% Similarity=0.068 Sum_probs=175.5
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
+++|....| +|.+.-+.+-..++...+.|.++|+-|||+.-+.-++...++++ .-.++++-.++++|.+-|+.
T Consensus 65 stYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 65 STYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred hhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHH
Confidence 356667777 78877777778888889999999999999986655555555443 34578899999999999999
Q ss_pred ccchhhh-H-hhhhhhchhhh-----hhhHHHHHH-HHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHH
Q 014686 83 NGLLGPI-K-AYACEIFREEH-----QALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCL 154 (420)
Q Consensus 83 ~g~~~~~-~-~~i~~~~~~~~-----r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~ 154 (420)
.+....+ . =++.|.-+++. .+.-++-.. .+..+-.+++.+.+..+.+ .+ ..+...++-
T Consensus 138 TsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd-------~~-------slGPVAPFd 203 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVD-------TF-------SLGPVAPFD 203 (454)
T ss_pred HHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHH-------Hh-------ccCCCCchH
Confidence 8887776 4 46777653321 111111111 2333334444455555554 11 112222333
Q ss_pred HHHHHH-HHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhh
Q 014686 155 CISLFA-FGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 233 (420)
Q Consensus 155 ~~~~~~-~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
..+... +...+..---.|.- .+..+.++. ..+-+...+.+..|+++...-..-.++-....
T Consensus 204 AAacfLaigmAvil~~W~ENy----gdps~~kdl--------------ltqf~gaa~aiaSD~ki~LLG~iqsLFE~smy 265 (454)
T KOG4332|consen 204 AAACFLAIGMAVILSSWSENY----GDPSENKDL--------------LTQFKGAARAIASDEKIALLGAIQSLFEGSMY 265 (454)
T ss_pred HHHHHHHHHHHHHHhhhhhcc----CChhhhHHH--------------HHHhhHhHHHHhcchHHHHHHHHHHHHhhhhh
Confidence 222222 21122111111111 111111111 00111223445566665443333332221111
Q ss_pred hHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHHHHHHHHHHHH-h
Q 014686 234 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAM-L 311 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 311 (420)
.+ .++.+|.... +-...--|.+++...+..++++-+..+.+.++-.+ ...+.+.+......+.+...... .
T Consensus 266 tF-----VFLWTPaLsp--n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vs 338 (454)
T KOG4332|consen 266 TF-----VFLWTPALSP--NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVS 338 (454)
T ss_pred ee-----eeeecccCCC--CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 11 2333332111 11112247788888888888887555666654222 22333333333333222222111 1
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
++......-++....+-...+..+|...-+-++..|++.|++.+-....=-++-..++ +++. +....+ .+
T Consensus 339 P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClv------Lynl-h~~~~p---~~ 408 (454)
T KOG4332|consen 339 PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV------LYNL-HVDAFP---TT 408 (454)
T ss_pred CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhh------heec-ccccCc---cc
Confidence 1111111122333333445567788999999999999999887755433223332222 2221 111111 14
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 014686 392 SQMVFFVLNVVEAIGVLMT 410 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~~~~ 410 (420)
-+..|-+++.+..++.+..
T Consensus 409 tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 409 TRNMFGICSAFLFVASILQ 427 (454)
T ss_pred cchhhhhhHHHHHHHHHHH
Confidence 5567777777777665543
No 227
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.89 E-value=8e-08 Score=87.70 Aligned_cols=139 Identities=17% Similarity=0.095 Sum_probs=101.2
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
++|++..+.+...+...++..++++ ..+++.||+++|+.+..+..+..++.+.. ..+ . ...+.+..++.+++
T Consensus 29 ~~~~s~~~~g~~~s~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~-----~-~~~l~~~~~~~g~g 100 (355)
T TIGR00896 29 ALGMSFSVAGLLTALPVLCFAVLAP-LAPWLARRFGEERSVAAGLLLIAAGILIR-SAP-----G-TALLFAGTALIGVG 100 (355)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHH-hHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc-----c-HHHHHHHHHHHHHH
Confidence 3799999999999999999999988 77888888999999888877666555443 211 1 11223334444444
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHH
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIG 406 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~ 406 (420)
.....+.......+..| ++|+++.++.+....+|..+++.+.+.+.+.... +|+..|...+++.++.
T Consensus 101 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~--------~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 101 IAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG--------HWQQALAWWALPALLA 167 (355)
T ss_pred HHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hHHHHHHHHHHHHHHH
Confidence 44555556667777665 7899999999999999999999999998876520 3888887776655444
No 228
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=7.5e-09 Score=97.37 Aligned_cols=148 Identities=15% Similarity=0.242 Sum_probs=125.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcC--CchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 80 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 80 (420)
++.+.++.+ ...+.++..+...++.+..|+++|+.. ++.+..++++..+++.+..+++++++.++..-.+.|
T Consensus 326 ~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 326 KSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred hhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 467788888 999999999999999999999999988 456667888888999999999999999999999999
Q ss_pred hhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHH
Q 014686 81 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 159 (420)
Q Consensus 81 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 159 (420)
++.|..... ...+.|..+.++-+.+.|+.....+++..+||++++.+.+..++ |...+...++.
T Consensus 400 ~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~---------------Y~~~f~~~g~~ 464 (509)
T KOG2504|consen 400 FCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN---------------YDHAFYFCGLC 464 (509)
T ss_pred HHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC---------------eeeehhhcChH
Confidence 999998887 67899999999999999999999999999999999998883322 33333566666
Q ss_pred HHHHHHHHHhcc
Q 014686 160 AFGVTIAAFWLP 171 (420)
Q Consensus 160 ~~~~~~~~~~l~ 171 (420)
.++....++..|
T Consensus 465 ~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 465 FLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHhH
Confidence 665555555555
No 229
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.87 E-value=4.6e-08 Score=88.29 Aligned_cols=147 Identities=24% Similarity=0.263 Sum_probs=119.3
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhh
Q 014686 14 IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAY 92 (420)
Q Consensus 14 ~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~ 92 (420)
.+...|.+.+...+.-++.-.+..++.+|+|.|+.++++..++.+=.++++++++.+.+.+.+.+.|+-.+..... ..|
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445899999999999999999999999999999999999999999999999999999999999999998887776 999
Q ss_pred hhhhchhhhhhhHHHHH-HHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHH-HHHHHhc
Q 014686 93 ACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWL 170 (420)
Q Consensus 93 i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 170 (420)
+++.+|+|-.++...+. +.+.++|.++.+.++|.+.| +.+++..+.+.+...+.. ++..+.+
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeee
Confidence 99999999888888874 78999999999999999999 444555556666665554 4556666
Q ss_pred ccccCC
Q 014686 171 PETLHR 176 (420)
Q Consensus 171 ~e~~~~ 176 (420)
+++++.
T Consensus 401 ~~~~~~ 406 (412)
T PF01306_consen 401 KKDKKQ 406 (412)
T ss_dssp --SSST
T ss_pred cCCCcc
Confidence 655443
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.84 E-value=1.4e-07 Score=89.25 Aligned_cols=146 Identities=12% Similarity=0.068 Sum_probs=97.7
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
.|-+ ....++.....+...+... +.+.++|.+|||.....+.++..++.+......+.+ .++....+.+++
T Consensus 74 iG~~-~~~~w~~~~~~l~~av~~~-~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~------~~iag~~l~Gvg- 144 (599)
T PF06609_consen 74 IGGS-DNWSWFSTAWTLASAVSFP-FVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN------TFIAGMVLYGVG- 144 (599)
T ss_pred cCCC-ccchHHHHHHHHHHHHHHH-hhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH------HHHHHHHHHHHh-
Confidence 4544 3445566666677777666 788999999999999999999999988876654433 233344444443
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
.+........++|..|.+.|+.+.++.....-.....+|.+...+.... +||+.|++..++..++.+..+
T Consensus 145 aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~----------~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 145 AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHS----------GWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCC----------CcchHHHHHHHHHHHHHHHHH
Confidence 4445556667899999999988877666544444445555554443332 899999999887777765544
Q ss_pred hhhhh
Q 014686 412 KPFLA 416 (420)
Q Consensus 412 ~~~~~ 416 (420)
+.+.|
T Consensus 215 ~fY~P 219 (599)
T PF06609_consen 215 FFYFP 219 (599)
T ss_pred HHhCC
Confidence 32333
No 231
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.1e-07 Score=87.66 Aligned_cols=151 Identities=17% Similarity=0.210 Sum_probs=108.6
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh---hHH------HHHH
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV---NFW------MAVL 74 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~ 74 (420)
+-|++.++ ..+......+...+.++++..+.||+|||+.++.+..+..+..++..... +.. ..++
T Consensus 299 ~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 299 TAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 45777777 88888899999999999999999999999999999999998888776642 111 1234
Q ss_pred HHHHhhhhccc-hhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHH
Q 014686 75 TRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 152 (420)
Q Consensus 75 ~r~l~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 152 (420)
+.++..++.+. ..|. .-+.+|.+|++.|+.++++.....-+...+-...-..+.+ .+|- ..
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~-------~~g~----------~~ 435 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN-------VIGP----------YV 435 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hhcc----------hh
Confidence 44444444332 3455 8899999999999999999988888887776666555555 2221 11
Q ss_pred HHHHHHHHHH-HHHHHHhcccccCCC
Q 014686 153 CLCISLFAFG-VTIAAFWLPETLHRH 177 (420)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~l~e~~~~~ 177 (420)
+++..++.+. .+..++.+||++.+.
T Consensus 436 filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 436 FILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred hHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 2344444444 556788999987543
No 232
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.82 E-value=1.4e-07 Score=80.93 Aligned_cols=361 Identities=14% Similarity=0.027 Sum_probs=200.9
Q ss_pred HHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhhHhhhhhhchhhhhhhH
Q 014686 26 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALG 105 (420)
Q Consensus 26 ~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~ 105 (420)
.-.+.+.-.+.=.+.|..-.|++++.-.+.......+.-+.++.+.+=+.-++.|...+.-..-++++-+..+|+++.++
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrv 131 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRV 131 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHH
Confidence 33455666667789999989999998888888888888899999999989999888766655458999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCccc
Q 014686 106 LSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD 185 (420)
Q Consensus 106 ~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~ 185 (420)
.+.-.++.-.|-..|..++-.+.... ..++.....+......+.....+++|..++...-++++++
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~--------------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~ 197 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLE--------------TLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDK 197 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhc--------------ccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhccccc
Confidence 99999999999999999998888621 3344455555555555566677888876643221111111
Q ss_pred chhHhhhhhhhhhhhh------hcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhH
Q 014686 186 VSYDALESASAEVKEE------EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 259 (420)
Q Consensus 186 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
....+.++...+.+.. ...-..+..+..+||.++.-.+-+.+.........++. ..+.+... -+-.....
T Consensus 198 ~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~-Q~LW~~~~---~~~~~vyN 273 (433)
T KOG3810|consen 198 ISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYT-QILWKEVA---PNPANVYN 273 (433)
T ss_pred ceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHH-HHHHHhhC---CCchhhhc
Confidence 1111111111100000 00001123445566666544444443333322222111 12211110 11122223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Q 014686 260 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLF 339 (420)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (420)
|..=.+..+.+.++.+ ..+.+.-.+.|..-+.++.....-+.+++ ++... ...++..+..++.........++..
T Consensus 274 G~veAv~tlLGa~~~~-~~g~l~i~w~r~g~~ll~~~s~~~agllf-~m~~t---~~Iw~~Ya~yvlfr~~y~l~itiA~ 348 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAAL-AAGYLNINWNRWGDLLLAVGSAVQAGLLF-IMAQT---QHIWVCYAGYVLFRVIYQLTITIAT 348 (433)
T ss_pred CHHHHHHHHHHHHHHH-HHHheeeccchhhHHHHHHHHHHhhhhhh-hhhcc---cceehhhhhHHHHHhhHhhhhhHHH
Confidence 4444555566666666 55555444444433333322222222222 22211 1233344444444444455566666
Q ss_pred HHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCC-CCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 340 ILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS-FLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 340 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~-~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
..+++....+.-|..+|++..+.-+-+.+-..+ +.|..+-..... ...-+..-|.+.+.+.+++..+.+.
T Consensus 349 ~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 349 FQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred HHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 667777888999999999887766555544433 233221111110 0002445577788888887665544
No 233
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.82 E-value=5.3e-08 Score=86.60 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=94.7
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhc
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 83 (420)
++|.++++ .+...+.+..+..++.+..+++.||+|+||++..+..+..++.++....++...+ ..-++.|++.
T Consensus 172 ~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~ 244 (310)
T TIGR01272 172 ALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFN 244 (310)
T ss_pred cCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHH
Confidence 46888888 9999999999999999999999999999999988888888777666555543333 3455788998
Q ss_pred cchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 84 GLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
+...|. .+...+..|++ .+++.++. ....+|.++.|++.|.+.|
T Consensus 245 s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 245 SIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 988887 88888887754 45666665 5667899999999999998
No 234
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.82 E-value=5.9e-08 Score=89.00 Aligned_cols=146 Identities=19% Similarity=0.277 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh-hhHHHHHHH----HHHhhhhccchhhh-Hh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLT----RFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~----r~l~G~~~g~~~~~-~~ 91 (420)
.+.+.++..++=...-...+++..|+|.|+++.++.+..++=..+.+.. ++.+...+. ..++|+..+...++ ..
T Consensus 245 ~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~ 324 (400)
T PF03825_consen 245 IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVR 324 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 6777777777777888889999999999999999999999988888887 554443333 45699998888887 99
Q ss_pred hhhhhchhhhhhhHHHHHHH-HhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHH-HHHHHh
Q 014686 92 YACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFW 169 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 169 (420)
++.+..|++.|+++.++++. ..++|..+|..++|++.+ .+|-+..+ + |...+.+.++..++. ++.+++
T Consensus 325 yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~-------~~g~~~~~-~--~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 325 YIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD-------AFGARGMF-D--WSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH-------Hhcchhhh-h--HHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999875 578999999999999999 55555444 1 333334444444443 333444
Q ss_pred cccc
Q 014686 170 LPET 173 (420)
Q Consensus 170 l~e~ 173 (420)
.+|+
T Consensus 395 fk~~ 398 (400)
T PF03825_consen 395 FKPK 398 (400)
T ss_pred ccCC
Confidence 4443
No 235
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.82 E-value=1.4e-07 Score=82.21 Aligned_cols=118 Identities=14% Similarity=0.040 Sum_probs=93.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSV 332 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (420)
+-+....|++-+.+.+...+.+. ..+.++|++|||+++..+.+...+...+.....+. ..+...=+..|.+ .
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~-~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F------~afv~aR~l~Gi~-k 135 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSP-LWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF------AAFVLARFLGGIF-K 135 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhh-hhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHhhhhc-c
Confidence 45667788999999999999988 67788888999999999998888877666554321 1122223333333 4
Q ss_pred HHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHH
Q 014686 333 SIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 378 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 378 (420)
+-.....++++|.+++++|+.+++..++..++|-++||.++|++..
T Consensus 136 gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 136 GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 5566788999999999999999999999999999999999999998
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.3e-06 Score=77.25 Aligned_cols=187 Identities=9% Similarity=-0.052 Sum_probs=132.7
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 014686 221 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
....++++.+.........|.. .+. ++.+..+++.+......+-.+.++ ..+++.||++.|+-+..++.++++
T Consensus 18 ~t~lFfl~G~~~~l~diLip~l-~~~-----f~ls~~~a~liqfaff~gYf~~~l-pa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 18 LTSLFFLWGFITCLNDILIPHL-KEV-----FDLTYFEASLIQFAFFGGYFIMSL-PAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred HHHHHHHHHHHhhcchhhHHHH-HHH-----hCccHHHHHHHHHHHHHHHHHHhc-cHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3333444444444444444433 333 789999999999998888888877 778888899999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 301 LLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
++.++.-.... ..+..+....++.+.+........+.++..+.|++....=+.+.+.++.+|+.++|.+++.+....
T Consensus 91 g~~lF~pAa~~---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~ 167 (422)
T COG0738 91 GAALFWPAASS---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG 167 (422)
T ss_pred HHHHHhhhhhh---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 98887544332 223334444555566677778888899999999988999999999999999999999999998841
Q ss_pred hh---------ccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhc
Q 014686 381 QK---------RLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQ 417 (420)
Q Consensus 381 ~~---------~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 417 (420)
.. .........++.++...+...++..+.....+.|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~ 213 (422)
T COG0738 168 VALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPD 213 (422)
T ss_pred hhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCc
Confidence 00 00001112577888888887777766665534454
No 237
>PRK09669 putative symporter YagG; Provisional
Probab=98.77 E-value=1.4e-07 Score=88.89 Aligned_cols=170 Identities=10% Similarity=0.011 Sum_probs=109.1
Q ss_pred hHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----hch-HHHHHHHHHHHHHHHHHHHHH
Q 014686 234 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGP-IMVARIAGVLTIPLLTSYPYI 308 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~ 308 (420)
....+++.|+.+. +|+++.++|.+..+.-+...+..+ +.+++.|| +|| |+.+..+.....+...+....
T Consensus 27 ~~~~~l~~~~t~~-----~gls~~~~g~i~~i~~i~dai~dp-~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~ 100 (444)
T PRK09669 27 TVMLFLAYFYTDV-----FGLSAAIMGTMFLVVRVLDAVTDP-LMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT 100 (444)
T ss_pred HHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHcccc-eeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC
Confidence 3344566666655 899999999999999999999988 56666666 455 455556655555555443333
Q ss_pred HHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCC
Q 014686 309 AMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDAS 387 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~ 387 (420)
+..+.........+...+.............++.+|.. ++++|.+..+.......+|+.+++.+...+....++....
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~- 179 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQ- 179 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh-
Confidence 22111112222333333333344455666677888876 5688999999999999999999888777776655321111
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 388 FLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 388 ~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.+|...+.+.+++.++..+..+.
T Consensus 180 --~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 180 --KGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhC
Confidence 26777787777777766655544
No 238
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.77 E-value=2.5e-07 Score=87.77 Aligned_cols=179 Identities=10% Similarity=0.020 Sum_probs=112.0
Q ss_pred hhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH----hhch-HHHHHHHHHHHHHHHHH
Q 014686 230 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER----ILGP-IMVARIAGVLTIPLLTS 304 (420)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 304 (420)
........+++.|+.+. .|.++..+|.++.+.-+...+..+ +.+.++| |+|| |+.+..+.....+...+
T Consensus 20 ~~~~~~~~~l~~yyt~v-----~Gls~~~vg~i~~i~ri~dai~dp-~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~l 93 (473)
T PRK10429 20 FAIGIVYMYLMYYYTDV-----VGLSVGLVGTLFLVARIWDAINDP-IMGWIVNNTRSRWGKFKPWILIGTLANSVVLFL 93 (473)
T ss_pred HHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHhhc-hheeehhcCCCCCCCcchhHhhhhHHHHHHHHH
Confidence 33344445666777665 799999999999999999999988 5566666 3466 66666676666666544
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhc
Q 014686 305 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKR 383 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~ 383 (420)
+...+..+.........+...+...+.........++..|.. ++++|.+..+......++|+.+.+.+...+.+..+..
T Consensus 94 lf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 94 LFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG 173 (473)
T ss_pred HHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 433221111112222333333444555566667778888887 6899999999877888888777777666655443321
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 384 LDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 384 ~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
+.. .++.....+.+++.+++.+..+. ..||+
T Consensus 174 ~~~---~g~~~~~~i~~~~~~~~~~~~~~-~~~e~ 204 (473)
T PRK10429 174 DRG---FGFQMFTLVLIAFFIVSTIITLR-NVHEV 204 (473)
T ss_pred chh---hhHHHHHHHHHHHHHHHHHHHHc-Cceec
Confidence 111 14666666666666665555544 34443
No 239
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.2e-07 Score=84.58 Aligned_cols=109 Identities=24% Similarity=0.385 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhh----hcCCchhHHHH-HHHHHHHHHHHhhhhhHHH------------HHHHHHHhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVAD----RYGRKPVIIMG-TASVVIFNTLFGLSVNFWM------------AVLTRFLLG 80 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~d----r~Grk~~l~~~-~~~~~~~~~~~~~~~~~~~------------l~~~r~l~G 80 (420)
.+.+--...+...+.+|+.|..+| ||||||.++.. .....++.++..++.++.. ..+.-++.|
T Consensus 69 ~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg 148 (498)
T KOG0637|consen 69 SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILG 148 (498)
T ss_pred ccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHH
Confidence 566666667777889999999999 58988887654 5555666777777654432 223334444
Q ss_pred h-----hc-cchhhhHhhhhhhchhhhhhh-HHHHHHHHhHHHHHHHHHHHhH
Q 014686 81 S-----LN-GLLGPIKAYACEIFREEHQAL-GLSTVSTAWGIGLIIGPALGGF 126 (420)
Q Consensus 81 ~-----~~-g~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~l~~~ 126 (420)
+ +. -...|+.+++.|...++++.+ +++.+.....+|..+|..++++
T Consensus 149 ~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 149 FWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred hHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc
Confidence 3 33 345677999999998766666 9999999999999999888863
No 240
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=3.3e-08 Score=85.62 Aligned_cols=128 Identities=20% Similarity=0.262 Sum_probs=95.0
Q ss_pred HHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHH----HHHHHHHhhhhccchhhhHhhhhhhchhhh
Q 014686 26 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM----AVLTRFLLGSLNGLLGPIKAYACEIFREEH 101 (420)
Q Consensus 26 ~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~----l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~ 101 (420)
.+.-.-|.++.+++.||+|||++|..+.+++++..++...+.+-.. ++.+|++. .|.+..++.|..|.+|.+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi---sg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI---SGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---hchheEEEEecCcccchhh
Confidence 3455678889999999999999999999999999988877654333 34445443 3444445899999999999
Q ss_pred hhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhccccc
Q 014686 102 QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 174 (420)
Q Consensus 102 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 174 (420)
|+...|.-+.+.-+|.++.|.++ ...+.+ -.++..+.+...++..+...++|-.+
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA-~~~e~s-----------------~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA-MRAELS-----------------TSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH-HHhccc-----------------eeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999999998 333311 12334455666666666667777443
No 241
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.71 E-value=3.3e-07 Score=81.66 Aligned_cols=112 Identities=34% Similarity=0.545 Sum_probs=98.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHhhhhccchhhh-Hhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYAC 94 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~-~~~i~ 94 (420)
.++..+.+.++..+++++.|.++||+|||+.+..+.....++.+...+..+ .+.+++.|+.+|++.+...+. .+++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 120 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLS 120 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 799999999999999999999999999998888888766666677777766 899999999999999988887 99999
Q ss_pred hhchh-hhhhhHHHHHHH-HhHHHHHHHHHHHhHhcc
Q 014686 95 EIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 95 ~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~ 129 (420)
|+.|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 121 EWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 788999998888 688899999988888876
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.69 E-value=8.6e-07 Score=82.87 Aligned_cols=156 Identities=15% Similarity=0.093 Sum_probs=117.6
Q ss_pred CccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q 014686 250 GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
++.++...+.+.+.++..++.+++.+ .+..+.||++..+.+....++-.+..++-... .....+++.-++.|.
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~-p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~------~s~~~~ialr~llGl 146 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQF-PSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV------HSFPGLIALRFLLGL 146 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHh-hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHH
Confidence 44678888899999999999999988 78888888884444443333332222222221 223345667777888
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
+..+..|....+++.-+.+++|++-+|+.++..++|+++|+.+...+.+..+ ... ..||++.|++-+++.++..++
T Consensus 147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~-~~~---~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG-SGG---LAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC-CCC---cCCceeehhHHHHHHHHHHhe
Confidence 9999999999999999999999999999999999999999999888776322 111 138999999999999998887
Q ss_pred Hhhhhhhc
Q 014686 410 TFKPFLAQ 417 (420)
Q Consensus 410 ~~~~~~~~ 417 (420)
.++ .+|+
T Consensus 223 ~f~-~lp~ 229 (495)
T KOG2533|consen 223 VFF-FLPD 229 (495)
T ss_pred EEE-EecC
Confidence 776 5554
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.64 E-value=2.9e-06 Score=81.42 Aligned_cols=144 Identities=15% Similarity=-0.005 Sum_probs=111.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHH
Q 014686 257 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 336 (420)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (420)
.+.+.+.+...++..++++ ..+++.|++|||+.+..+.++..++.++.....+ ...+.+.-++.+++.+....
T Consensus 89 ~~~s~~~s~~~lga~~g~l-~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~------~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSL-LAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS------WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhccchhhhhh
Confidence 3558899999999999988 7778999999999999999999999888877652 33566667777778888888
Q ss_pred HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhh
Q 014686 337 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLA 416 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 416 (420)
....+.+|..|++.||...+..+....+|..++ .+.+...+.. . .+|+..+.+..+.+++..+. .. ..|
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~-~-------~~Wr~~~~~~~i~~~~~~~~-~~-~~p 230 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKV-Y-------AGWRIPLGLALIPAVILALG-ML-FLP 230 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccC-C-------ccHHHHHHHHHHHHHHHHHH-HH-hCC
Confidence 899999999999999999999999988888777 4444443332 0 27998888877777776666 33 455
Q ss_pred cc
Q 014686 417 QR 418 (420)
Q Consensus 417 ~~ 418 (420)
|.
T Consensus 231 es 232 (513)
T KOG0254|consen 231 ES 232 (513)
T ss_pred CC
Confidence 43
No 244
>PRK11462 putative transporter; Provisional
Probab=98.62 E-value=2.2e-06 Score=80.93 Aligned_cols=174 Identities=12% Similarity=-0.032 Sum_probs=111.4
Q ss_pred HHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH---hhch-HHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 236 SEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER---ILGP-IMVARIAGVLTIPLLTSYPYIAML 311 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
..++..|+.+. .|.++..+|.++.+.-+...+..++.+...|| |+|| |+.+..+.+...+...++...+..
T Consensus 29 ~~~l~~fyt~~-----~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~ 103 (460)
T PRK11462 29 MLYMMFFYTDI-----FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDL 103 (460)
T ss_pred HHHHHHHHHHh-----hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCC
Confidence 34555565555 89999999999999999999999854444443 2455 455556666666655544333321
Q ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCC-cchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCC
Q 014686 312 SGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVD-QDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLP 390 (420)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~ 390 (420)
+.........+...+...+.........++..|..+ +++|.+..+.......+|..+++.+...+.+..++.+.. .
T Consensus 104 s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~---~ 180 (460)
T PRK11462 104 SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKP---L 180 (460)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh---h
Confidence 111222233334444445556666677778888765 889999999999999999999988887777665422211 1
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 391 GSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 391 g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
+|.....+.+++.+++..+.+. ..||+
T Consensus 181 g~~~~~~i~~ii~~i~~~i~~~-~~kE~ 207 (460)
T PRK11462 181 GFQGGIAVLSVVAFMMLAFCFF-TTKER 207 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-cceec
Confidence 5666667777766666555444 33443
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.61 E-value=1.5e-06 Score=75.82 Aligned_cols=322 Identities=14% Similarity=0.021 Sum_probs=166.4
Q ss_pred hhhhhhhhh-----hcCCchhHHH-HHHHHHHHHHHHhh-----------hhhHHHHHHHHHHhhhhccchhhh-Hhhhh
Q 014686 33 SVFWGLVAD-----RYGRKPVIIM-GTASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 94 (420)
Q Consensus 33 ~~~~g~l~d-----r~Grk~~l~~-~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 94 (420)
-+.|.++.| |+||||.-++ +..+.+......+. .++...+...-++.-+..+....+ -.+.-
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 467899999 9999886543 33333333333332 133333433445555666666665 67777
Q ss_pred hhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchH---HHHHHHHHHHHHHHHHHhcc
Q 014686 95 EIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL---PCLCISLFAFGVTIAAFWLP 171 (420)
Q Consensus 95 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~ 171 (420)
....+++.+.+......+.+.|..++..+--.+.+..-..+....|.. ..++.. -....+...+++-....+.+
T Consensus 160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~---~~g~ItL~gy~~fwg~~~~vat~Lv~~~k 236 (510)
T KOG3574|consen 160 TMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPL---DQGFITLAGYLWFWGALFIVATTLVALLK 236 (510)
T ss_pred HhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcC---ccceEEhhHHHHHHHHHHHHHHHHHHHhc
Confidence 777888888777777766776666665432222210000000111110 000000 00122222333222223333
Q ss_pred cccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCc
Q 014686 172 ETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 251 (420)
Q Consensus 172 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
++++++..++ ++.. .++..+..+++++-|............-..+.+.....++-+. +
T Consensus 237 ke~~~~~~~e-~~~~---------------i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLl------e 294 (510)
T KOG3574|consen 237 KENDESVDEE-LELG---------------IHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLL------E 294 (510)
T ss_pred CCCchhhhhh-hhcC---------------HHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHH------H
Confidence 3322221100 0000 1111223566777777766655555544444444444444333 2
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----hHHHHHHHHHHHHHHHHHHHHHHHhhh------hHHHHHH
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG-----PIMVARIAGVLTIPLLTSYPYIAMLSG------FGLAFLL 320 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 320 (420)
.|.+.++.+.+..+.--..++.....+++..++.. ++...++.... ...++..+.+.... .....+.
T Consensus 295 ~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~--~~t~Lv~~~~~~~~~~G~~~~~~~il~ 372 (510)
T KOG3574|consen 295 HGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGL--VQTALVWWTPTLGHSDGTFPRGYYILL 372 (510)
T ss_pred cCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHH--HHHHHHhhhcccccCCCceeechHHHH
Confidence 68888888776655444555555545555443211 11112222222 22222222221111 1223333
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
+....+...+....+....+..+++.||...|+.+.+.|+..++|+---..+...+.|...
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3344555666677777888889999999999999999999999999988888888888753
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.57 E-value=8.8e-08 Score=87.13 Aligned_cols=129 Identities=22% Similarity=0.300 Sum_probs=111.8
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 82 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 82 (420)
||.+..+.- .|........+-++.-++.+++.+|+|+-+++..++.+..+=.+..+..+|.|..+..-+++|+.
T Consensus 399 ed~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit 472 (618)
T KOG3762|consen 399 EDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGIT 472 (618)
T ss_pred hhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHH
Confidence 445544444 67777777778888888899999999999999999999999999999999999999999999999
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHHHHH-HHhHHHHHHHHHHHhHhccccccCCccccccccc
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 144 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~ 144 (420)
.+..+.+ .+|+++..||+-|..+.++.. ...++|--+|+++||.+.+ .+|-|..|
T Consensus 473 ~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~-------~fg~~ttf 529 (618)
T KOG3762|consen 473 HALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE-------RFGARTTF 529 (618)
T ss_pred HHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe-------eehhHHHH
Confidence 9998887 999999999999999999875 5678999999999999998 55555444
No 247
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.55 E-value=1.1e-06 Score=82.43 Aligned_cols=112 Identities=21% Similarity=0.269 Sum_probs=101.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHhhhhccchhhh-Hhhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYAC 94 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~-~~~i~ 94 (420)
.+.+..+..++..++.+++++++||+|+|+++..+..+.+++.++..+.+ |.+.+++.-++.|++.+...+. .++++
T Consensus 262 ~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~a 341 (428)
T PF13347_consen 262 ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLA 341 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccc
Confidence 68888899999999999999999999999999999999999999988886 9999999999999999988887 89999
Q ss_pred hhchh-------hhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 95 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 95 ~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
|..+. ++.|..++..+....+|..+++.+.+.+.+
T Consensus 342 d~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 342 DVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred cchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 98873 334788999999999999999999998876
No 248
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.44 E-value=0.001 Score=62.42 Aligned_cols=346 Identities=13% Similarity=0.100 Sum_probs=165.2
Q ss_pred hHHHHHHHHH-HHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh---------h--------------------
Q 014686 18 AGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------V-------------------- 67 (420)
Q Consensus 18 ~g~~~s~~~~-~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~---------~-------------------- 67 (420)
+..+-....+ ...+......+++||++|.+++-+....+.....++++. +
T Consensus 60 I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~ 139 (491)
T PF03219_consen 60 IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIA 139 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHH
Confidence 3444443333 445567778999999999999877776666666555552 1
Q ss_pred --hHHHHHHHHHHhhhhccchhh-h-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc-ccccCC-cccccc
Q 014686 68 --NFWMAVLTRFLLGSLNGLLGP-I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYP-NLFSSE 141 (420)
Q Consensus 68 --~~~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~~~~~-~~~gw~ 141 (420)
+.|.+.+.-+..-+-+..... . ..+..|.++.+|-.|..++...+.++|.++++.+...+.+ .....+ ..-.|.
T Consensus 140 ~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~ 219 (491)
T PF03219_consen 140 MFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWE 219 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHh
Confidence 112222222222222222222 3 6778899999999999999999999999999888888776 111000 011111
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHH
Q 014686 142 SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 221 (420)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (420)
. ..........+.+++......++.+...+++...++.++ +++++++....+..+.++|+|.+...
T Consensus 220 ~-----~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~---------~kk~k~k~s~~es~k~l~kS~yL~~I 285 (491)
T PF03219_consen 220 L-----SLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKK---------KKKKKPKMSLKESFKLLLKSKYLLCI 285 (491)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhc---------ccccCCCccHHHHHHHHHhCHHHHHH
Confidence 1 111111122222222222333333221111110000000 00000011122456677888888776
Q ss_pred HHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014686 222 IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.+...++.......+...-....+... +...++ ...|......++..++..+ +++.+-||.|-+....+.-+...+.
T Consensus 286 a~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ys-afmG~~~~~tGivtii~~~-l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 286 ALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYS-AFMGKFSSWTGIVTIIMMF-LSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 666655554433333222222221110 001222 2235556666777777764 6778888888776666554443333
Q ss_pred HHHHH-HHHHhhhhHHHHH------HHHHHHHHHhhhHHH--------HHHHHHHhhhcCCcchhhHHhhHHHHHH-HHH
Q 014686 302 LTSYP-YIAMLSGFGLAFL------LNCASVVKNLLSVSI--------ITGLFILQNRAVDQDQRGAANGIAMTGM-SLF 365 (420)
Q Consensus 302 ~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g 365 (420)
.+.+. ............. ........|...... +...--++---.+++.|.++=+....+. .+|
T Consensus 363 ~~~FF~~~~f~~~~~~~~~~~~~~~pl~lav~~G~i~~v~~K~~kYs~fd~~kEm~yipld~e~k~k~Ka~iD~~~~r~G 442 (491)
T PF03219_consen 363 GLLFFGFILFNNSLGPIVASLFGTSPLMLAVFFGAIQNVLSKSAKYSLFDPTKEMAYIPLDPESKYKGKAAIDVVGSRLG 442 (491)
T ss_pred HHHHHHHHHHhhhhhHHHHHhhccchHHHHHHHHHHHHHHHhhcceeecchhhhhhcccCCHHHHhhcceeeeeeccchh
Confidence 22221 1111100000000 000111111111000 0011111111146788888888776654 788
Q ss_pred HHHhhhhhhHHHHhh
Q 014686 366 KAAGPAGGGALFSWA 380 (420)
Q Consensus 366 ~~~g~~~~g~l~~~~ 380 (420)
-..|..+...+....
T Consensus 443 Ks~gs~~~~~l~~~~ 457 (491)
T PF03219_consen 443 KSGGSLIQQGLLSLF 457 (491)
T ss_pred hHHHHHHHHHHHHHh
Confidence 888887766665554
No 249
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.42 E-value=5.1e-06 Score=64.73 Aligned_cols=108 Identities=20% Similarity=0.186 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhhchh
Q 014686 21 VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE 99 (420)
Q Consensus 21 ~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~ 99 (420)
-.++......+++++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-.+.|++.+..+++ ..++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 4566677778888999999999999999999999888555443 5677889999999999999999998 8899999999
Q ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 100 EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 100 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
++|+|..++.-.....+.++|.++.-.+.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988887766543
No 250
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.40 E-value=2.8e-05 Score=67.94 Aligned_cols=146 Identities=16% Similarity=0.061 Sum_probs=119.7
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKN 328 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
.+++|.+...+|++.+...+..-..++ ..+++.||++.++.+..+.++..++.++=... ....++....+.+
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap-~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-------~~~~L~~gt~l~G 110 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAP-AAPRLARRFGEERSLFLALLLIAAGILIRSLG-------GLPLLFLGTLLAG 110 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-------cHHHHHHHHHHHH
Confidence 455899999999999998888888777 88999999999999999998888877765432 1223455556666
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
......+.....++.+.+| ++.+..+|++.+...+++++++.+.-.+.++.. +|+....+-+..++++.+
T Consensus 111 ~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~---------gW~~aL~~WAl~allAl~ 180 (395)
T COG2807 111 AGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSG---------GWRGALGFWALLALLALL 180 (395)
T ss_pred hhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhc---------cHHHHHHHHHHHHHHHHH
Confidence 6667777888888888887 889999999999999999999999999998872 799999999999888877
Q ss_pred HHhh
Q 014686 409 MTFK 412 (420)
Q Consensus 409 ~~~~ 412 (420)
..+-
T Consensus 181 ~WlP 184 (395)
T COG2807 181 IWLP 184 (395)
T ss_pred HHhh
Confidence 6554
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.39 E-value=8.3e-06 Score=78.58 Aligned_cols=138 Identities=17% Similarity=0.139 Sum_probs=113.0
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
...+........++..++..++++ +.+.++|++|||+++..+.++..++.+...+..+ .....+.-++.+++.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~-i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~------~~~~~~~Rfl~G~~~ 185 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSL-IFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN------YWMFLIFRFLSGFFG 185 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHh-hheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhc
Confidence 456667777788888888888877 7788888899999999999998888766666543 334556667777888
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLM 409 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~ 409 (420)
.+.......+..|.+++++|+.+..+ ......++..+|...+++.. +|+..+++.....++..++
T Consensus 186 ~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 186 SGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred cchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999 88889999999999888876 4888888888887777665
No 252
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.38 E-value=0.00018 Score=65.73 Aligned_cols=167 Identities=11% Similarity=-0.071 Sum_probs=100.4
Q ss_pred hhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhch-
Q 014686 209 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP- 287 (420)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (420)
..+++|-|++....+.....-..+........+=+. +.|++.+..+.+..+..=..++.....++|...+-..
T Consensus 271 l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLl------EkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~ 344 (544)
T PF13000_consen 271 LWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLL------EKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLD 344 (544)
T ss_pred HHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHH------HcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccc
Confidence 445677788877777666655554444444333332 2688888887777665555556555555554443110
Q ss_pred -------------------------HHHHHHHHHHHHHH----HHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhHHHHH
Q 014686 288 -------------------------IMVARIAGVLTIPL----LTSYPYIAML--SGFGLAFLLNCASVVKNLLSVSIIT 336 (420)
Q Consensus 288 -------------------------~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (420)
.+....+...-.+. .......+.. .+...+..+++...+..+.....+.
T Consensus 345 ~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFV 424 (544)
T PF13000_consen 345 VDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFV 424 (544)
T ss_pred cccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111111111 1111111100 1123444455556666677778888
Q ss_pred HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 337 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
...+.-+++.+|..-|+.+.+.|++.++|+---..+.=++.|...
T Consensus 425 ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 425 AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 888999999999999999999999999999888888878888753
No 253
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.36 E-value=0.00035 Score=61.53 Aligned_cols=150 Identities=12% Similarity=0.070 Sum_probs=96.6
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
+|++..+++.++......+.+.+. +.+.+.||+|||+......++..++++.-.. .....+++.-++.+...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~-~~G~laD~~Grk~~cl~~cily~~scl~k~~-------~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGT-FVGSLADRYGRKKACLLFCILYSLSCLTKHS-------SNYPVLLLGRVLGGIAT 135 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-------cccHHHHHHHHHHHHHH
Confidence 799999999999987788888777 6677888889999988888888777764322 22334455555555555
Q ss_pred HHHHHHHHHHh-hh----cCCcchhhHHhhHHHH-HHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHH
Q 014686 332 VSIITGLFILQ-NR----AVDQDQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAI 405 (420)
Q Consensus 332 ~~~~~~~~~~~-~~----~~~~~~~g~~~g~~~~-~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~ 405 (420)
.......-+.. .| -+|++..+...+.... .+.+-++.+..++-.+.+..+ .|...+|.....+.++
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~--------~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG--------FGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC--------CCCcchHHHHHHHHHH
Confidence 55555544432 22 3566666666665552 234444445555555555442 1457788888888888
Q ss_pred HHHHHhhhhhhcc
Q 014686 406 GVLMTFKPFLAQR 418 (420)
Q Consensus 406 ~~~~~~~~~~~~~ 418 (420)
+.+++.. ..+|+
T Consensus 208 ~~~~I~~-~W~EN 219 (354)
T PF05631_consen 208 AAVLILK-TWPEN 219 (354)
T ss_pred HHHHHHh-ccccc
Confidence 8777665 44443
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.32 E-value=5.5e-06 Score=74.36 Aligned_cols=129 Identities=12% Similarity=-0.003 Sum_probs=99.8
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-GLAFLLNCASVVKNLL 330 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (420)
-++++...+.+..+..++.+.+++ ..+++.|++|||+++...+++++++.++.......+.. .....+...=.+.+++
T Consensus 79 g~~ps~i~~~Vn~~A~vGti~GQl-~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiG 157 (538)
T KOG0252|consen 79 GHYPSGVLALVNAAALVGTIFGQL-FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIG 157 (538)
T ss_pred CcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcc
Confidence 347777888888888999999998 88999999999999999988888877654443332222 3344455556667778
Q ss_pred hHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 331 SVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
.++-+|...++++|....+.||+-.+....++.+|...|..+.-.+...+.
T Consensus 158 IGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe 208 (538)
T KOG0252|consen 158 IGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFE 208 (538)
T ss_pred ccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHh
Confidence 888999999999999999999999999888888887777666655554443
No 255
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.31 E-value=2.1e-05 Score=72.17 Aligned_cols=176 Identities=14% Similarity=0.002 Sum_probs=121.1
Q ss_pred HHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hch-HHHHHHHHHHHHHHHHHHHHHHH
Q 014686 235 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI---LGP-IMVARIAGVLTIPLLTSYPYIAM 310 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (420)
...++..|+.+. .|.++..+|.++.+.=+...+..++.+...||+ +|| |+.+..+.+...+...+....+.
T Consensus 31 ~~~yLl~fYTdv-----~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~ 105 (467)
T COG2211 31 VVLYLLFFYTDV-----FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD 105 (467)
T ss_pred HHHHHHHHHhcc-----cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC
Confidence 334555666666 899999999999999999999988544444432 333 55666665655555555444432
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcC-CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCC
Q 014686 311 LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFL 389 (420)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~ 389 (420)
......+....+...+.+.+....+....++.+++. ++++|.+..+.-.....+|..+...+.+++.+..++.+...
T Consensus 106 ~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~-- 183 (467)
T COG2211 106 FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKAL-- 183 (467)
T ss_pred cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchh--
Confidence 221223333334444444555566666667777765 47899999999999999999999999999999887765433
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhhhhccC
Q 014686 390 PGSQMVFFVLNVVEAIGVLMTFKPFLAQRH 419 (420)
Q Consensus 390 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
||+....+.+++.++..++.++ ..+||.
T Consensus 184 -g~~~~~~~~~vi~~i~~l~~~~-~v~ER~ 211 (467)
T COG2211 184 -GYQGTALVLGVIGVILLLFCFF-NVKERV 211 (467)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHH-Hhhccc
Confidence 7888888888888888777776 566653
No 256
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.21 E-value=5.4e-05 Score=64.10 Aligned_cols=137 Identities=18% Similarity=0.051 Sum_probs=92.2
Q ss_pred HHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhh-HH
Q 014686 238 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-GL 316 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (420)
.++.|..+ ..+.+|+|+.+...+.....++..++ + ..+.+.|+.+++.++.++.....++............. ..
T Consensus 20 ~Fs~yS~~--Lk~~l~~sq~~l~~l~~~~~~G~~~G-~-~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 20 TFSAYSPQ--LKSRLGYSQSQLNTLSTAGDIGSYFG-I-LAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred chhhhhHH--HHHHhCCCHHHHHHHHHHHHHHhhcc-H-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 44444433 33448999999999998888888765 5 67888899999999999999999998777655433221 12
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
.+.+.....+.+......+........+.+| ++||++.|+.-....+++++-..+...+.+.
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 2222333333333333334444444556687 6899999999999999888777665555443
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.17 E-value=0.001 Score=63.87 Aligned_cols=128 Identities=14% Similarity=0.104 Sum_probs=92.5
Q ss_pred cccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhc-CCchhHHHHHHHHHHHHHHHhhhhh--------------
Q 014686 4 DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVVIFNTLFGLSVN-------------- 68 (420)
Q Consensus 4 ~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~~~~-------------- 68 (420)
++|.+..+ +.-..+.+.-......+..+.++|-| ||-+++.++.++..++..+..++..
T Consensus 67 ~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~ 140 (571)
T KOG1237|consen 67 ELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPG 140 (571)
T ss_pred HhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCC
Confidence 44555444 55566677777777888999999975 8999999998888888655544311
Q ss_pred -----------HHHHHHHHHHhhhhccchhhh-Hhhhhhhch---hhh-h--hhHHHHHHHHhHHHHHHHHHHHhHhccc
Q 014686 69 -----------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EEH-Q--ALGLSTVSTAWGIGLIIGPALGGFLAQP 130 (420)
Q Consensus 69 -----------~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~---~~~-r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 130 (420)
...+..+.-+..+|.|..-|+ .+.-+|.++ +++ + ..-+.++....++|..++-.+-.+.-+
T Consensus 141 ~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~- 219 (571)
T KOG1237|consen 141 GNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD- 219 (571)
T ss_pred CCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh-
Confidence 124555666777788998898 888899988 322 2 366788888999999998888777766
Q ss_pred cccCCccccccccc
Q 014686 131 AEKYPNLFSSESLF 144 (420)
Q Consensus 131 ~~~~~~~~gw~~~~ 144 (420)
..||..-|
T Consensus 220 ------~~~w~lgf 227 (571)
T KOG1237|consen 220 ------NVGWKLGF 227 (571)
T ss_pred ------cccceeec
Confidence 66775544
No 258
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.17 E-value=4.8e-05 Score=68.00 Aligned_cols=152 Identities=18% Similarity=0.174 Sum_probs=118.9
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhh-hcCCchhHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 78 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grk~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l 78 (420)
|-||+|..| ..-++.....|..++-...|++.. |.++|+.-.+++....++..+..+ ..+.+.+...-++
T Consensus 237 ~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 237 EVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred HHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 457889999 899999999999999999998888 677888888888888777666544 4678899999999
Q ss_pred hhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHH
Q 014686 79 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 157 (420)
Q Consensus 79 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 157 (420)
.|++.|.+... .+.+.|..++++-|..+|.+.....++..+|..+++.+.|....+... + - ..+|-.+|.+.+
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~---~--~-~~aY~~VF~lEa 384 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN---S--P-ALAYGVVFALEA 384 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---C--c-chHHHHHHHHHH
Confidence 99999999887 889999999999999999999999999999999999998732211100 0 0 234555556665
Q ss_pred HHHHHHHHH
Q 014686 158 LFAFGVTIA 166 (420)
Q Consensus 158 ~~~~~~~~~ 166 (420)
+..+..+..
T Consensus 385 ~ll~~a~~l 393 (403)
T PF03209_consen 385 VLLLAALVL 393 (403)
T ss_pred HHHHHHHHH
Confidence 555554443
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.15 E-value=0.00082 Score=62.51 Aligned_cols=52 Identities=15% Similarity=0.036 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhh
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAG 372 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 372 (420)
++..++.++..+-..........+..++++|..+..+.+.+-.+|-.+|..+
T Consensus 376 ~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 376 IILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566666677777788888999999888888888888888777765
No 260
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.11 E-value=9.1e-05 Score=61.84 Aligned_cols=243 Identities=11% Similarity=0.010 Sum_probs=109.5
Q ss_pred hhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 014686 100 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 179 (420)
Q Consensus 100 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~~~~~ 179 (420)
|+|+....+...+.++|.++.-.. ++.+... +. ..+..|+....+.+++.++.++....+- ++-+...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~--------~~-~~~~~W~~I~si~~lL~~IpLIly~ifG-k~fd~~~ 69 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISSSV--------VI-ALTNNWQWILSIFILLIFIPLILYIIFG-KNFDIYS 69 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcchH--------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccccC
Confidence 567777777778888888776443 2222000 01 1145577666666666655444444432 2211111
Q ss_pred CCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCC----c
Q 014686 180 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNY----S 255 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 255 (420)
+++++++. +.+.+++....+.+|+|.-|...+.+.........- ..+.+..........+. +
T Consensus 70 ~~~k~~k~------------~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~V~p--~t~~~~~~~~~~s~~ni~~~~~ 135 (267)
T PF07672_consen 70 PKEKQEKE------------NSTLSKKPSYKSILKEKETWKWILIYGIWLVVVVFP--FTPSWFNILIWISPANIKSVVS 135 (267)
T ss_pred cccccccc------------cccccccchHHHHHccchHHHHHHHHHHHheeEEEe--ccchhHhHhhhcCccccccccc
Confidence 11010000 002223466788999999988877776654322111 01111110100000111 0
Q ss_pred hh---hHHHHHHHHHHHHHHHH-HHHHHHHHHhhchHHHHHHH----HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 014686 256 TQ---MVGEVLAITGFSLLVFQ-LSLYPFLERILGPIMVARIA----GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 327 (420)
Q Consensus 256 ~~---~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (420)
.. ...-...+..+.+.+.+ ..++++-....+||+.+... .++..+..+. ..............+.+..++.
T Consensus 136 ~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~ 214 (267)
T PF07672_consen 136 GGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLA 214 (267)
T ss_pred ccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHH
Confidence 11 11122333333343333 33333433345566655432 2222222222 1111112222334456666677
Q ss_pred HhhhHHHHHHHHHHhhhc--CCcchhhHHhhHHHHHHHHHHHHh
Q 014686 328 NLLSVSIITGLFILQNRA--VDQDQRGAANGIAMTGMSLFKAAG 369 (420)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~--~~~~~~g~~~g~~~~~~~~g~~~g 369 (420)
+.+.-++.+....+..|. .+|++.|...|+.=.++.+.-.+.
T Consensus 215 G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~ 258 (267)
T PF07672_consen 215 GFFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIY 258 (267)
T ss_pred HHHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHH
Confidence 777777777776666653 345666666665544444443333
No 261
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.11 E-value=6e-06 Score=56.28 Aligned_cols=66 Identities=17% Similarity=0.300 Sum_probs=61.3
Q ss_pred CcccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHH
Q 014686 1 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 72 (420)
Q Consensus 1 i~~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l 72 (420)
|++|.++|.++ .|++.+.+++||.+|.+...++.++..+++.+..+++...+..+.+++.++++..
T Consensus 18 M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 18 MQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 46888999999 9999999999999999999999999888999999999999999999999887764
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.08 E-value=5.7e-05 Score=67.94 Aligned_cols=128 Identities=13% Similarity=-0.051 Sum_probs=85.6
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML--SGFGLAFLLNCASVVKNL 329 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 329 (420)
+| +...+-+...++.+..++..+ .+-|+.||+|-|....++..+..++..+=.....+ +......+......+.+.
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf-~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGF-AAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhh-HHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH
Confidence 45 555566677777788888876 67778888899999999999988887764443322 111111233333333322
Q ss_pred hhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 330 LSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
....+.....-+..--+|+++|+++..+....+.+|.+++..+...+..+..
T Consensus 153 Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~ 204 (480)
T KOG2563|consen 153 AQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSK 204 (480)
T ss_pred hhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCC
Confidence 2222222223344455899999999999999999999999998888887763
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.05 E-value=0.00025 Score=69.16 Aligned_cols=168 Identities=10% Similarity=-0.051 Sum_probs=111.4
Q ss_pred HHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhh--h
Q 014686 237 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--F 314 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 314 (420)
..+..|+... +|++...+..+........-+..++.+...++++|+++.+..+.++..++..+......... .
T Consensus 8 aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 8 TILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred HHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 3444555444 68888877777766666666665645555566789999999998888888776655322111 1
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc---hhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCC
Q 014686 315 GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPG 391 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g 391 (420)
......+....+...+..++-|...+...+.++++ .+-+.+.+.....++|+.+++.+.+++.+..+..... .+
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~---~~ 159 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQ---DC 159 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC---cc
Confidence 11122333444455566677788888888888754 4677888888888999999999999887553211000 16
Q ss_pred chHHHHHHHHHHHHHHHHHhh
Q 014686 392 SQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 392 ~~~~f~~~~~~~~~~~~~~~~ 412 (420)
|...|.+.+++++++.++...
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 888999988888888766543
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.05 E-value=0.00017 Score=66.14 Aligned_cols=104 Identities=16% Similarity=0.246 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhh---------hHHHHHHHHHHhhhhccchhhh-Hhhhhhhchhh---hhhhHHHHHHHHh
Q 014686 47 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 113 (420)
Q Consensus 47 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~ 113 (420)
|+++++.++..+|.++..++. +.+.++++-.+.++|.|..-|+ ..+.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888855432 2367888899999999999998 99999999865 5678888999999
Q ss_pred HHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHH
Q 014686 114 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA 166 (420)
Q Consensus 114 ~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (420)
++|..+++.+.+++-+ +++|...+.+.++..++.++.
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHH
Confidence 9999999999999987 444555556665555554443
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=0.00039 Score=64.87 Aligned_cols=131 Identities=18% Similarity=0.192 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcC
Q 014686 267 GFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV 346 (420)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (420)
++..++.+. ..+.++|++|||..+........+......+.. ++.+.. .-.............+++++..
T Consensus 72 ~~~~~i~s~-~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-------~~~~~~--~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSP-LIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-------YWFFLL--LGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHh-hhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-------HHHhhh--cccccchhhhhhhhhhheeecc
Confidence 556666666 567778888999999888877777666654432 222221 1122344566778888999999
Q ss_pred CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhhhhhhcc
Q 014686 347 DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFKPFLAQR 418 (420)
Q Consensus 347 ~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
..++|....|+.+.....+..++|...+.+.+.. |+..+|.+..+..++..+.... ..||+
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~----------~~a~~f~ia~~~~~~~~~y~~~-~l~Es 202 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL----------GIALVFLIAAASGILSLLYMLL-FLPES 202 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc----------CchHHHHHHHHHHHHHHHHHhh-ccccc
Confidence 9999999999999999999999999999999986 8889999999999988888777 66664
No 266
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.94 E-value=0.016 Score=53.31 Aligned_cols=341 Identities=13% Similarity=0.054 Sum_probs=174.4
Q ss_pred hHHHHHHHHH-HHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhh---------hhH------------------
Q 014686 18 AGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------VNF------------------ 69 (420)
Q Consensus 18 ~g~~~s~~~~-~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~---------~~~------------------ 69 (420)
+.++-+..-+ +..+..++..++.++..|.+++-.-+..+....+++++. +++
T Consensus 63 I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~i 142 (509)
T COG3202 63 ISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFI 142 (509)
T ss_pred hHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeee
Confidence 6666676766 677888999999999999999988777777777777663 110
Q ss_pred -----HHHHHHHHHhhhhccchhh-h-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccc
Q 014686 70 -----WMAVLTRFLLGSLNGLLGP-I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 142 (420)
Q Consensus 70 -----~~l~~~r~l~G~~~g~~~~-~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~ 142 (420)
|...+.-...=+-...... . .....|.++.+|-.|..++++.+.+++..++..+..++....+.+. .
T Consensus 143 li~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~------~ 216 (509)
T COG3202 143 LIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALA------S 216 (509)
T ss_pred EeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHh------H
Confidence 2222222222222222222 3 5567888899999999999999999999999888888876221100 0
Q ss_pred cccCccchHHHHHHHHHHHHHHHHHHhccc----ccCCC-C-CCCCcccchhHhhhhhhhhhhhhhcCCCCchhhhccch
Q 014686 143 LFGKFPYFLPCLCISLFAFGVTIAAFWLPE----TLHRH-N-DDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 216 (420)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (420)
-+.....+..+.+.+...++.+...+++.+ +|... + .+++++++. +-.-.+..+.+.|+|
T Consensus 217 ~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~--------------k~~~~~s~k~i~~Sk 282 (509)
T COG3202 217 EFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKL--------------KLGLIESFKMILRSK 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccc--------------cCcHHHHHHHHHhhh
Confidence 000011333334444444444444444322 22210 0 000000000 111223456677888
Q ss_pred hHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 014686 217 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 296 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (420)
.++...+...+++.+........-.-....... ..--....|.+....++...+.....+.-+.||.|-.....+.-+
T Consensus 283 yL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~--~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPi 360 (509)
T COG3202 283 YLGAIALLVLAYGVSINLVEGVWKSGIKELYPT--TNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPL 360 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC--hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHH
Confidence 877666665555544333222111111100000 111233445666677777666666677777777776665555555
Q ss_pred HHHHHHHHHHHHH---HhhhhH-----HHHHHHHHHHHHHhhhHH-------HHHHHHHHhhhcCCcchhhHHhhHHHHH
Q 014686 297 LTIPLLTSYPYIA---MLSGFG-----LAFLLNCASVVKNLLSVS-------IITGLFILQNRAVDQDQRGAANGIAMTG 361 (420)
Q Consensus 297 ~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 361 (420)
...++.+++.... ...... ....+.+....++..... ..-..--...--.+|++|.++-+....+
T Consensus 361 v~litg~lFF~~~~f~~~~~~~~~~~~~~~pl~L~v~iG~iqnvlsK~~KYslfD~tKEma~ipldpe~r~kgKAa~D~i 440 (509)
T COG3202 361 VMLITGVLFFGFAFFNNSIGSIFGGILGSPPLVLAVYIGGIQNVLSKITKYSLFDATKEMAYIPLDPEYRTKGKAAVDVI 440 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccCCchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHcCcCCHhHHhhccchhhhh
Confidence 5444433332111 110000 000011111111111110 1111111111124688898888888766
Q ss_pred H-HHHHHHhhhhhhHHHHhh
Q 014686 362 M-SLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 362 ~-~~g~~~g~~~~g~l~~~~ 380 (420)
. .+|-.+|..+...+....
T Consensus 441 ~~k~GKSiGSli~~~~~~i~ 460 (509)
T COG3202 441 GGKLGKSIGSLIQSLLFIIF 460 (509)
T ss_pred hhcccccHHHHHHHHHHhee
Confidence 5 788777777766555554
No 267
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.91 E-value=1.7e-07 Score=88.53 Aligned_cols=136 Identities=20% Similarity=0.333 Sum_probs=88.0
Q ss_pred HHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh--h---hhh-----HHHHHHHHHHhhhhccchhhh-Hhhhhh
Q 014686 27 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L---SVN-----FWMAVLTRFLLGSLNGLLGPI-KAYACE 95 (420)
Q Consensus 27 ~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~--~---~~~-----~~~l~~~r~l~G~~~g~~~~~-~~~i~~ 95 (420)
+...++.+....+.||+|||++++.+..+.+++.+..+ . .++ ...+.......-.......+. ..+..|
T Consensus 297 ~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~E 376 (451)
T PF00083_consen 297 LVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAE 376 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccc
Confidence 44456666777999999999999999998888877764 1 111 112221121111122233455 688899
Q ss_pred hchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhccccccCCccccccccccCccchHHHHHHHHHHHHHHHHHHhcccccC
Q 014686 96 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 175 (420)
Q Consensus 96 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~ 175 (420)
.+|.+.|++..++......++..++|.+...+.+ ..+- +....+..++..+..++..+++||++.
T Consensus 377 lfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~-------~~~~--------~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 377 LFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN-------NLGG--------WGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred cccccccccccccccccccccccccccccccccc-------cccc--------cccchhhHHHHHHHHhheeEEEeeCCC
Confidence 9999999999999999989999888888777765 2220 111112333333444566788999875
Q ss_pred CC
Q 014686 176 RH 177 (420)
Q Consensus 176 ~~ 177 (420)
..
T Consensus 442 ~~ 443 (451)
T PF00083_consen 442 KT 443 (451)
T ss_pred CC
Confidence 43
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.85 E-value=0.0005 Score=63.59 Aligned_cols=163 Identities=14% Similarity=0.105 Sum_probs=111.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 331 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (420)
.+-+.+..|+..+...++..+.++..+.|-.|+..-|+-+..+.++++++.+++......+... ..++++.-++.| .+
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~-~y~mL~~R~l~G-vg 143 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGV-KYLMLVARILTG-VG 143 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccch-HHHHHHHHHHcC-cC
Confidence 5677788899999999999999996666655554447888888999999988886555544332 223333334333 34
Q ss_pred HHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhcc--CC-CCCCCchHHHHHHHHHHHHHHH
Q 014686 332 VSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRL--DA-SFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~--~~-~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
.+.......++++..-+++|.++++..+...-+|.++||.+...+........ .+ ....-|..+-++.+.+.++..+
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 45566777888887788999999999888888888888887665554432211 11 1112466777888888888877
Q ss_pred HHhhhhhhc
Q 014686 409 MTFKPFLAQ 417 (420)
Q Consensus 409 ~~~~~~~~~ 417 (420)
+... ..+|
T Consensus 224 ~i~~-~f~E 231 (488)
T KOG2325|consen 224 IILF-FFKE 231 (488)
T ss_pred HHHh-heee
Confidence 7665 4443
No 269
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.84 E-value=0.00039 Score=59.31 Aligned_cols=108 Identities=15% Similarity=0.036 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhhHhhhhhhc
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIF 97 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~ 97 (420)
.|.+.-+-.+...+..+.+....||+.--.=..+..++.+.+.++.+++++.++=+.+-.+..++.|.-....--.+..+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y 143 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY 143 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC
Confidence 35555566677777888888899987643334556677888889999999999988888888888877665533333333
Q ss_pred hhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 98 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 98 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
++ ...+.++.+.+.++.+|..--..+.+
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhh
Confidence 33 23556666777777777765555554
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.78 E-value=4.1e-05 Score=51.84 Aligned_cols=47 Identities=26% Similarity=0.596 Sum_probs=42.0
Q ss_pred ccccccccccchhhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHH
Q 014686 3 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 55 (420)
Q Consensus 3 ~~~~~s~~~~~~~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~ 55 (420)
++.|+|+.| +|.+.++..+...++++++|.++||++|++..+.....
T Consensus 28 ~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 28 KQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 568999999 99999999999999999999999999998887765544
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.72 E-value=0.0074 Score=47.18 Aligned_cols=105 Identities=17% Similarity=0.058 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhh
Q 014686 265 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (420)
+......+.++ +.+.+.+++|.|+.+.++.+...+-.+.... ..+..++....+.++.....+.....++.+
T Consensus 45 i~Y~~~~~s~l-~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~-------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 45 ILYGSFAISCL-FAPSIVNKLGPKWSMILGSLGYAIYIASFFY-------PNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHH-hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 33444455555 5677888899999999998887766555432 123456667777778888888888889999
Q ss_pred cCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHH
Q 014686 345 AVDQDQRGAANGIAMTGMSLFKAAGPAGGGALF 377 (420)
Q Consensus 345 ~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~ 377 (420)
..+++.+++-.|+.-.+.+.+..+|..+.-.+.
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999988888888888877655443
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.44 E-value=0.0053 Score=57.44 Aligned_cols=147 Identities=12% Similarity=0.073 Sum_probs=93.9
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-----GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVV 326 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
+|.++.+...+.....+...+- . +.+.++|.+ +||+.+.++.++..++...+...+....... ...+..++
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~K-p-~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~--~~~~~l~l 95 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSIK-P-LYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA--IAVVLLFL 95 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHHh-h-hHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh--hHHHHHHH
Confidence 8999999888887766665554 3 566777765 3666666677666555555544433111111 11222233
Q ss_pred HHhhhHHHHHHHHHHhhhcC--CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHH
Q 014686 327 KNLLSVSIITGLFILQNRAV--DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEA 404 (420)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~ 404 (420)
..++....-....+...|.. .|+.+|...+.......+|+.++..+.|.+.+.. +++..|.+.+.+..
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF----------GPQGVFLISAALPL 165 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC----------CCeEEehHHHHHHH
Confidence 33344444445555665554 2334889999999999999999999999999887 66777777777666
Q ss_pred HHHHHHhh
Q 014686 405 IGVLMTFK 412 (420)
Q Consensus 405 ~~~~~~~~ 412 (420)
+..+....
T Consensus 166 l~~~~~~~ 173 (433)
T PF03092_consen 166 LMLIVALF 173 (433)
T ss_pred HHHHHHHH
Confidence 66544444
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.40 E-value=0.02 Score=51.80 Aligned_cols=51 Identities=12% Similarity=0.034 Sum_probs=33.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhh
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPA 371 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 371 (420)
.....+.++..+-.......+..+.+|++++-.+-.+...+-..|-+.|..
T Consensus 347 ~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 347 IFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred HHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 344444455556666777788888888888877777766666666655554
No 274
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.37 E-value=0.0032 Score=42.62 Aligned_cols=68 Identities=18% Similarity=0.247 Sum_probs=50.8
Q ss_pred HHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 014686 223 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 297 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
..+++..........+.+.|+.+ .|+++.++|.+.++..+..+++.. +.+.+.||.++++........
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~p-l~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAPP-LWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCccHHHHHHHHH
Confidence 34455555556666677777654 699999999999999999999988 677888888877766555443
No 275
>PRK03612 spermidine synthase; Provisional
Probab=97.29 E-value=0.14 Score=49.14 Aligned_cols=164 Identities=16% Similarity=0.055 Sum_probs=83.0
Q ss_pred HHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH--
Q 014686 226 CVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT-- 303 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 303 (420)
++..++...+.....-.+... +|-+....+.+.++.-.+..+|+. +++++.++..+ +....-..+..++.+
T Consensus 24 f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs~-l~~~~~~~~~~-~~~~~e~~i~l~~~~~~ 96 (521)
T PRK03612 24 FVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGAL-LSKYLLRDAAA-GFVAVELLLALLGGLSA 96 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHHH-HHHhhhhhHHH-HHHHHHHHHHHHHHHHH
Confidence 344444455554444444433 677777777777776666666665 44454433222 211111111111111
Q ss_pred -HHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHH-hhh
Q 014686 304 -SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS-WAQ 381 (420)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~ 381 (420)
++...... ............+..++..+...|....+..+ ...++.++..|-......+|+.+|+.+.+.+.- ..
T Consensus 97 ~ll~~~~~~-~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l- 173 (521)
T PRK03612 97 LILYAAFAF-QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL- 173 (521)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc-
Confidence 11111110 01111112222333344445556665555544 222345677888889999999999999988776 44
Q ss_pred hccCCCCCCCchHHHHHHHHHHHHHHH
Q 014686 382 KRLDASFLPGSQMVFFVLNVVEAIGVL 408 (420)
Q Consensus 382 ~~~~~~~~~g~~~~f~~~~~~~~~~~~ 408 (420)
|.....++.+.+.++..+
T Consensus 174 ---------G~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 174 ---------GLIRTAALTGSLNLLAAL 191 (521)
T ss_pred ---------chHHHHHHHHHHHHHHHH
Confidence 555555555555544443
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.17 E-value=0.22 Score=46.85 Aligned_cols=125 Identities=8% Similarity=0.017 Sum_probs=81.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhH-------------------
Q 014686 255 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFG------------------- 315 (420)
Q Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 315 (420)
+.+....+.+..-+...+.-..+..++.+|.+|+++.............++.+...+....
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4456666666554544444233677888888998888776666555555544432111000
Q ss_pred ------HHHHHHHHHHHHHhhhHHHHH-HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHh
Q 014686 316 ------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSW 379 (420)
Q Consensus 316 ------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 379 (420)
..+...+..+.....+....+ ..+..++|..++++..+-.++.....++|..+++.+...+.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011111222333344455555 7889999999999999999999999999999999998888754
No 277
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.98 E-value=0.24 Score=45.32 Aligned_cols=159 Identities=9% Similarity=0.032 Sum_probs=102.2
Q ss_pred HHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014686 235 YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
...++..|+..+ ..|++.++..--..+...=+-+..++....+.|..+.|+++....+...+...++.+..+..
T Consensus 22 sEPfl~~yL~~~----~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~-- 95 (412)
T PF01770_consen 22 SEPFLTPYLTGP----DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL-- 95 (412)
T ss_pred CCccchHHHcCC----ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH--
Confidence 334444454433 25788887765554444444444555778899999999999999888777777766654322
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchH
Q 014686 315 GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQM 394 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~ 394 (420)
.+-+..+..+.. .+.-...++++-..+|+++--++.+......-+|..++..++-.+..... .++..
T Consensus 96 ----~mq~~q~~yg~~-~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~--------~sy~~ 162 (412)
T PF01770_consen 96 ----AMQLMQFFYGLA-TAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG--------VSYFQ 162 (412)
T ss_pred ----HHHHHHHHHHHH-HHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCHHH
Confidence 222333333333 33345556666666889999999999999999998888888777766432 14666
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 014686 395 VFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 395 ~f~~~~~~~~~~~~~~~~ 412 (420)
...+......++.++.++
T Consensus 163 L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 163 LNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666655555555555444
No 278
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.85 E-value=0.21 Score=43.85 Aligned_cols=135 Identities=19% Similarity=0.074 Sum_probs=86.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhHHHHH
Q 014686 257 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 336 (420)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (420)
...+.......+....+.. ..+.+.||.|||+....+......+.+....... .............+.......+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~-~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSL-LAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN----VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHH
Confidence 4567777777777777765 6777777778886666666543333222222221 1122222333334555567888
Q ss_pred HHHHHhhhcCCc-chhhHHhhHHHH-HHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHH
Q 014686 337 GLFILQNRAVDQ-DQRGAANGIAMT-GMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEA 404 (420)
Q Consensus 337 ~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~ 404 (420)
....+..+..|+ ++|+...+.... ...++..++|.+.+.+.+. .. .+|+..|........
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~ 175 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LL-------WGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-------cchHHHHHHHHHHHH
Confidence 888999998887 688999998888 5788889999888877776 11 167775655554443
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.80 E-value=0.00024 Score=67.89 Aligned_cols=163 Identities=13% Similarity=0.001 Sum_probs=2.7
Q ss_pred cCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Q 014686 248 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS--------------- 312 (420)
Q Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 312 (420)
.++.++++..+.|.+.+..-++..+..++++.+ ..|..|.+.+..+.++.+++.+++.+-+...
T Consensus 29 iErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~-g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 29 IERRFGLSSSQSGLISSSYDIGSLVVVLFVSYF-GGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 455699999999999999999999998855544 5555777788888888887776654321100
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHH
Q 014686 313 -----------------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMS 363 (420)
Q Consensus 313 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 363 (420)
....+.++++..++.|++....++.-.+++.|.+++++.+...|+......
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~ 187 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSI 187 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhh
Confidence 001345666777888888889999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHhhhhccCCC--------C----CCCchHHHHHHHHHHHHHHHHHh
Q 014686 364 LFKAAGPAGGGALFSWAQKRLDAS--------F----LPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 364 ~g~~~g~~~~g~l~~~~~~~~~~~--------~----~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
+|-++|-.+++...+..-+..... . .+.|..-|++.+.+.++..+...
T Consensus 188 lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 188 LGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp ------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888776543322111 1 12355555556666555544443
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.51 E-value=0.025 Score=51.99 Aligned_cols=114 Identities=9% Similarity=-0.021 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc---hhhHHhhHHHHHH
Q 014686 289 MVARIAGVLTIPLLTSYPYIAMLSGF---GLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD---QRGAANGIAMTGM 362 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 362 (420)
+.+..+.++..++.+++......... .....+++...+.+.+.++.=|...++..|.++++ +|.+.+.......
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 34566677777777665444332211 12223444455566777888899999999988765 5667777788889
Q ss_pred HHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 363 SLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 363 ~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
++|..+++.+.+++.++. +|...|.+.++..+++.+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~----------~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY----------GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-----------HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcccc----------chhhhhhHHHHHHHHHHHHHHh
Confidence 999999999999999887 8999999999988888776654
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.39 E-value=0.014 Score=56.85 Aligned_cols=163 Identities=12% Similarity=0.003 Sum_probs=119.8
Q ss_pred CCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh----------------
Q 014686 249 LGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS---------------- 312 (420)
Q Consensus 249 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 312 (420)
.+.++++..+.|++.+.+-++..+...++ .+..-|..|.+.+..+.++++++.++..+-+...
T Consensus 124 ErRF~i~Ss~sG~I~s~~dig~~l~i~fV-sYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 124 ERRFKISSSQSGLIASSYDIGNLLLIIFV-SYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred hhhcCCCCCcceeEeeecccchhhhhHhH-HHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 34488999999998888888888876644 4444555777888888888887777655431100
Q ss_pred ------------------------------hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHH
Q 014686 313 ------------------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGM 362 (420)
Q Consensus 313 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 362 (420)
....+.+++...++.|.+....++.-.+++.|.+.+++.....|+..++.
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 00146677778888899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhHHHHhhhhc-cC--------CCCCCCchHHHHHHHHHHHHHHHHHhh
Q 014686 363 SLFKAAGPAGGGALFSWAQKR-LD--------ASFLPGSQMVFFVLNVVEAIGVLMTFK 412 (420)
Q Consensus 363 ~~g~~~g~~~~g~l~~~~~~~-~~--------~~~~~g~~~~f~~~~~~~~~~~~~~~~ 412 (420)
.+|=++|-.+++.+....-+. .. +.-.+.|..-|++++.+.++..+..+.
T Consensus 283 ~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred HhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888776554 11 111224666667777777777666554
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.18 E-value=0.059 Score=50.06 Aligned_cols=107 Identities=16% Similarity=0.301 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhh---hcCCchhHHHHHHHHHHHHHHHhhh------------------hhHHHHHHHHH
Q 014686 19 GYVGSSFMFGRALTSVFWGLVAD---RYGRKPVIIMGTASVVIFNTLFGLS------------------VNFWMAVLTRF 77 (420)
Q Consensus 19 g~~~s~~~~~~~~~~~~~g~l~d---r~Grk~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~ 77 (420)
++-.-...++..+++.+.+.+++ |+||++.+.++..+..+..++.-.. +++....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33333344455555555666664 6899999999888888887776552 24556777788
Q ss_pred Hhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhH
Q 014686 78 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 126 (420)
Q Consensus 78 l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 126 (420)
+.|++.+..... +..+.+.. +++|..+.++...-..++..++-.....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999988887 88888888 5778888888887777777665554433
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.12 E-value=0.0018 Score=57.59 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhh
Q 014686 321 NCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 373 (420)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 373 (420)
++..++.++..+-..........+..++++|..+..+....-.+|-.+|..+.
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---------------HHHH----------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555666666777777888888889998888887777777777776543
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.11 E-value=0.058 Score=49.19 Aligned_cols=107 Identities=16% Similarity=0.230 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHH--HHH---HHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA--SVV---IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~--~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 91 (420)
..+....|.+|-.++.--...+ |+ |++.+.+.+ +.. +.....-+.++.|..++.-+..|+.+|..+.. ..
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6777788888777765433221 33 444333322 222 22223344688999999999999988888775 88
Q ss_pred hhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhc
Q 014686 92 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 128 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 128 (420)
.+.|..|+++|..+++..+.+-++|..++..++-.+-
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999998876654
No 285
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.56 E-value=0.26 Score=33.81 Aligned_cols=71 Identities=21% Similarity=0.176 Sum_probs=54.3
Q ss_pred hhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 014686 232 DMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA 309 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
-+.+...+|....+ .++|..+.|.+.+.+.++..++.+ ...++.++.++++.+..+.+...+..+...+..
T Consensus 8 RFayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GAl-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 8 RFAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGAL-LASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555566655443 699999999999999999999988 666777766778888888888777777766544
No 286
>PRK03612 spermidine synthase; Provisional
Probab=95.53 E-value=0.2 Score=48.08 Aligned_cols=110 Identities=15% Similarity=0.104 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHH---HHHHHHHhhhh----hH-HHHHHHHHHhhhhccchhhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV---VIFNTLFGLSV----NF-WMAVLTRFLLGSLNGLLGPI 89 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~---~~~~~~~~~~~----~~-~~l~~~r~l~G~~~g~~~~~ 89 (420)
.+.+.+++..|..+|+...+++.++--|+.. ..-+.+. .++..+..... .+ ..+...-++.++..|...|.
T Consensus 52 ~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl 130 (521)
T PRK03612 52 FSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPL 130 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999888744322222 1111111 11111111111 11 11233345567777777776
Q ss_pred -HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 90 -KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 90 -~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
..+..+.. .++-++..|-......+|.++|+++.+++.-
T Consensus 131 ~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 131 LMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 44443322 2234667788888999999999998888764
No 287
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.43 E-value=2.3 Score=39.71 Aligned_cols=178 Identities=13% Similarity=0.024 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 014686 218 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 297 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (420)
.+.+....++.....-.+....+.++.+. +.-+-...+..-..-.+..++.+..++.++|+. .|.+........
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i-----~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~ 77 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISI-----FPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVV 77 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHH
Confidence 34455555666555555555666666544 222333334444444555555656567777654 777776665443
Q ss_pred HHHH----HHHHHHHHHhhh-----hHHHHHHHHHHHHHHhhhHHHHHHHHHHh-----hhc--CCcchhhHHhhHHHHH
Q 014686 298 TIPL----LTSYPYIAMLSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQ-----NRA--VDQDQRGAANGIAMTG 361 (420)
Q Consensus 298 ~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~g~~~g~~~~~ 361 (420)
.-.. ..++........ ......++......+...-.........+ ..+ -+++...+..+.+.-+
T Consensus 78 Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRI 157 (432)
T PF06963_consen 78 QNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRI 157 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHH
Confidence 3222 222211111111 11122222222222222212111111111 111 2456666677766667
Q ss_pred HHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 362 MSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 362 ~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
-.+...++|.+.|.+.+.. +......+.++..+++...=+
T Consensus 158 DL~ckllaPl~vG~l~t~~----------s~~~~~~~i~~~N~~S~~vEy 197 (432)
T PF06963_consen 158 DLFCKLLAPLFVGLLMTFA----------SPVIAAIFIAGWNLASVFVEY 197 (432)
T ss_pred HHHHHHHHHHHHHHHhhcc----------CHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999987 677777778888777766543
No 288
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.58 E-value=3 Score=36.80 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=65.3
Q ss_pred HHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hhhhhhhchh--hhh
Q 014686 26 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQ 102 (420)
Q Consensus 26 ~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~--~~r 102 (420)
.+.-+.++.+.+.+..++|-|.++.++.......-. .-+=+.+..++-.-...|++.+..+.. -+|+++.-.. ++|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~ 146 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQR 146 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhh
Confidence 344455666666899999999999888776654332 224467889999999999999887776 5666555432 334
Q ss_pred -------------hhHHHHHHHHhHHHHHHHHHHHhH
Q 014686 103 -------------ALGLSTVSTAWGIGLIIGPALGGF 126 (420)
Q Consensus 103 -------------~~~~~~~~~~~~~g~~~g~~l~~~ 126 (420)
+..+.++....-.|..+...+-..
T Consensus 147 ~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~ 183 (390)
T KOG3097|consen 147 GEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTL 183 (390)
T ss_pred hhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233445555555555555544433
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.15 E-value=0.34 Score=44.56 Aligned_cols=122 Identities=16% Similarity=0.022 Sum_probs=79.6
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----hchHH-HHHHHHHHHHHHHHHHHHHHHhhhh-----------H
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIM-VARIAGVLTIPLLTSYPYIAMLSGF-----------G 315 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 315 (420)
.|.+....+.+.....+.+++.+. +.+..+|| +|||| .+..+.....++++++++....... .
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP-~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r 140 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQP-LVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR 140 (498)
T ss_pred cCCCcccccccccccccccceecc-cccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence 688888888888887888888888 44444554 55544 5555566666666666665432210 1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhH-HhhHHHHHHHHHHHHhhhhhh
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGA-ANGIAMTGMSLFKAAGPAGGG 374 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~g~~~g~~~~g 374 (420)
.....++...+.=+.........-++..+...++++.+ +.+....+..+|+.+|-.+.+
T Consensus 141 ai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 141 AIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11222222223334445666677888888887777777 999999999999988877665
No 290
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.49 E-value=1.2 Score=39.99 Aligned_cols=103 Identities=13% Similarity=0.045 Sum_probs=58.3
Q ss_pred HHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHh------hh------hhHHHHHHHHHHhhhhccc--hhh-hHh
Q 014686 27 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG------LS------VNFWMAVLTRFLLGSLNGL--LGP-IKA 91 (420)
Q Consensus 27 ~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~------~~------~~~~~l~~~r~l~G~~~g~--~~~-~~~ 91 (420)
....+..++.|...|+..|+|++...+.+.=++.+.++ +. .+++.+..+-.+.-...+. ... +.+
T Consensus 74 gs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~ 153 (503)
T KOG2601|consen 74 GSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGT 153 (503)
T ss_pred hHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 34566778889999999999998777665444333332 21 2455555544443332221 111 111
Q ss_pred --hhhhhc----hhhhh---hhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 92 --YACEIF----REEHQ---ALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 92 --~i~~~~----~~~~r---~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.-.||. ..|.+ .+..+.....-..-..+.|.+-|.+..
T Consensus 154 i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iit 200 (503)
T KOG2601|consen 154 ILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIIT 200 (503)
T ss_pred EEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccce
Confidence 123333 22333 344466666666778889999998887
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.54 E-value=11 Score=34.62 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhh
Q 014686 316 LAFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANG 356 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 356 (420)
.....++.....+..............++ .|++.....++
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~ 155 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMS 155 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHh
Confidence 33334444444555555666666666666 77775544443
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.48 E-value=6.5 Score=35.71 Aligned_cols=37 Identities=11% Similarity=-0.089 Sum_probs=22.4
Q ss_pred HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhh
Q 014686 337 GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGG 373 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 373 (420)
......-.+..+++-|-+........+.|.+++..+.
T Consensus 153 AVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 153 AVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 3444455556778877777665555566666655443
No 293
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.03 E-value=16 Score=35.80 Aligned_cols=149 Identities=17% Similarity=0.087 Sum_probs=90.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHHHHHHHHHhh------------------
Q 014686 252 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYIAMLS------------------ 312 (420)
Q Consensus 252 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 312 (420)
++.+...+........-......+ .+++++|. .||-+.+.++.++..++..++......+
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l-~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~ 146 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPL-LGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCES 146 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccC
Confidence 455555555555554444444434 66666664 6888888888888777765554443322
Q ss_pred -hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcc----hhh--HHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccC
Q 014686 313 -GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVDQD----QRG--AANGIAMTGMSLFKAAGPAGGGALFSWAQKRLD 385 (420)
Q Consensus 313 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g--~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~ 385 (420)
+......+.........+.++.-|.....-++.++++ .+. .-+.......+.|..++..+.-++.+..
T Consensus 147 ~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~----- 221 (571)
T KOG1237|consen 147 PSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV----- 221 (571)
T ss_pred cchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc-----
Confidence 1112233344444444566677788888888888722 222 4455555666777777777766666655
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHh
Q 014686 386 ASFLPGSQMVFFVLNVVEAIGVLMTF 411 (420)
Q Consensus 386 ~~~~~g~~~~f~~~~~~~~~~~~~~~ 411 (420)
+|...|.+..+...++.++.+
T Consensus 222 -----~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 222 -----GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred -----cceeeccHHHHHHHHHHHHHH
Confidence 788888877777776655543
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.22 E-value=1.3 Score=37.85 Aligned_cols=146 Identities=14% Similarity=0.044 Sum_probs=73.3
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q 014686 251 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 330 (420)
Q Consensus 251 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
.+|+...++|.++.......++.+. +.+-+.||.|||+.....++...++++.= .....-++++.-.+.+..
T Consensus 66 tYgFgkG~IgqLfiaGfgSsmLFGt-ivgSLaDkqGRKracvtycitYiLsCiTK-------hSpqYkVLmVGR~LGGia 137 (454)
T KOG4332|consen 66 TYGFGKGDIGQLFIAGFGSSMLFGT-IVGSLADKQGRKRACVTYCITYILSCITK-------HSPQYKVLMVGRVLGGIA 137 (454)
T ss_pred hcCccCCccceeeecccchHHHHHH-HHHHHHhhhccccceeeehHHHHHHHHhh-------cCCceEEEeehhhhhhHH
Confidence 3788888888877664445555555 55666777799987666655555444321 001111233333333333
Q ss_pred hHHHHHHHHH-HhhhcC-----CcchhhHHhhHHH-HHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHH
Q 014686 331 SVSIITGLFI-LQNRAV-----DQDQRGAANGIAM-TGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVE 403 (420)
Q Consensus 331 ~~~~~~~~~~-~~~~~~-----~~~~~g~~~g~~~-~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~ 403 (420)
....++..-+ ++.|.. |.+-...-++=.. ..+.+-++++...+..+.|... .|.-.+|-..+++.
T Consensus 138 TsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~s--------lGPVAPFdAAacfL 209 (454)
T KOG4332|consen 138 TSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFS--------LGPVAPFDAAACFL 209 (454)
T ss_pred HHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhc--------cCCCCchHHHHHHH
Confidence 3444444333 344433 2222222222111 2223344444444445555542 25666777777766
Q ss_pred HHHHHHHhh
Q 014686 404 AIGVLMTFK 412 (420)
Q Consensus 404 ~~~~~~~~~ 412 (420)
.++..+.+.
T Consensus 210 aigmAvil~ 218 (454)
T KOG4332|consen 210 AIGMAVILS 218 (454)
T ss_pred HHHHHHHHh
Confidence 666655543
No 295
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.13 E-value=2 Score=37.49 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhc
Q 014686 54 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 128 (420)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 128 (420)
+++.+......+.++++...+.-+..|+-+|..++. .--+.+-.++++|-.+++....+-++|..++..++-.+-
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 344455556667899999999999999977776664 666777778889999999999999999998887775543
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.08 E-value=22 Score=34.06 Aligned_cols=123 Identities=8% Similarity=-0.002 Sum_probs=72.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHhh-----hh---------------
Q 014686 255 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS-----GF--------------- 314 (420)
Q Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------------- 314 (420)
+++.+..+=...-+...+.-..+..++.++.++.++.............++++.-.+. ..
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 4555554433323322222233567777888888877765555544444443321110 00
Q ss_pred ------HHHHHHHHHHHHHHhhhHHHHH-HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHH
Q 014686 315 ------GLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFS 378 (420)
Q Consensus 315 ------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 378 (420)
..|. .....+..-..+....+ ..+.+++|..+.++..+..++.....++|..++..+...+.+
T Consensus 136 ~~i~~~~~Wt-~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWT-FSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111 11112222223333333 578999999999999999999999999999999998888877
No 297
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.10 E-value=7.3 Score=36.64 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=73.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhhhhhcCCc-hhHHHHHHHHHH---HHHHHhh---------hhhHHHHHHHHHHhhhhc
Q 014686 17 YAGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTASVVI---FNTLFGL---------SVNFWMAVLTRFLLGSLN 83 (420)
Q Consensus 17 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk-~~l~~~~~~~~~---~~~~~~~---------~~~~~~l~~~r~l~G~~~ 83 (420)
+.-.....+.++-.+|..+..+. ..-++| +.+.+..+.-.+ ..++|.. -++-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 34566777888888888755432 111222 133333333222 2233322 235566777789999999
Q ss_pred cchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHh
Q 014686 84 GLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 127 (420)
Q Consensus 84 g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 127 (420)
|-.... ..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988776 88888889999999999999999999999998876443
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=80.03 E-value=14 Score=31.65 Aligned_cols=103 Identities=19% Similarity=0.187 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhh-cCCchhHH----HHHHHHHHHHHHHhh-h----hhHHHHHHHHHHhhhhccchh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-S----VNFWMAVLTRFLLGSLNGLLG 87 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~ 87 (420)
.....-++..|..+|....|+++.. +.||+.+. .++++..++.+.... . .++..+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4555666777777888888888774 45666543 334444444444211 1 246677888888888653444
Q ss_pred hhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHH
Q 014686 88 PIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 120 (420)
Q Consensus 88 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 120 (420)
++.-.+...+++.++.+.--..+..+++|.++=
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHHH
Confidence 444445555554444444445566677776543
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.49 E-value=12 Score=26.81 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhc-CCchhHHHHHHHHH
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTASVV 57 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~-Grk~~l~~~~~~~~ 57 (420)
.+.-.+.=+++..+.....||+.||| |.++..++..++.+
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 34556667777777888889999997 66665554444433
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=74.10 E-value=72 Score=29.28 Aligned_cols=48 Identities=6% Similarity=-0.062 Sum_probs=30.8
Q ss_pred chhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHHHHHHHHHHHH
Q 014686 349 DQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVFFVLNVVEAIG 406 (420)
Q Consensus 349 ~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f~~~~~~~~~~ 406 (420)
+......+.....-.....+.|.+.|.+.... +.+..-..+++..+++
T Consensus 171 s~lt~mnatir~iDq~tn~Lapv~tg~Iitfv----------sl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 171 SVLTNMNATIRGIDQSTNLLAPVITGLIITFV----------SLRASAGTFAAWALVS 218 (503)
T ss_pred HHHhhcchhhhhhhhhhhchhhhhhcccceee----------chhhhhhhhHHHHHHH
Confidence 33334445555566778899999999999887 4555444444444443
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=68.16 E-value=32 Score=24.52 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=16.9
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHHHH
Q 014686 275 LSLYPFLERILGPIMVARIAGVLTIP 300 (420)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
.+++.|+|++++..+...+.+++..+
T Consensus 60 ~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 60 VAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 44888999999876654444444333
No 302
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=67.91 E-value=1.1e+02 Score=29.06 Aligned_cols=125 Identities=10% Similarity=0.049 Sum_probs=73.5
Q ss_pred CchhhHHHHHHHHHH-HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHh-------------------hh
Q 014686 254 YSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAML-------------------SG 313 (420)
Q Consensus 254 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 313 (420)
.+++.+..+-...-+ .+++... +..++.++..+.++............+++++.-.+ +.
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~-iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~ 136 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTI-IYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPM 136 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCc
Confidence 445555555555444 2333333 56667777787777766655555555544443221 00
Q ss_pred h--H------HHHHHHHHHHHHHhhhHHHHH-HHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhh
Q 014686 314 F--G------LAFLLNCASVVKNLLSVSIIT-GLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWA 380 (420)
Q Consensus 314 ~--~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 380 (420)
. + .|. ......+.-..+....+ ..+...+|....++..+-.++.+...+++..++..+..++.++.
T Consensus 137 ~l~~~ili~~~Ws-~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 137 FLKWFILIVGEWS-YSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred cceeeeEeecchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 0 0 011 11111222222233333 67788999999999999999999999999998888888877643
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=67.53 E-value=2 Score=38.29 Aligned_cols=106 Identities=20% Similarity=0.135 Sum_probs=2.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh-cCCchhHHHHHHHHHH---HHHHHh----------hhhhHHHHHHHHHHhhhhccc
Q 014686 20 YVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVI---FNTLFG----------LSVNFWMAVLTRFLLGSLNGL 85 (420)
Q Consensus 20 ~~~s~~~~~~~~~~~~~g~l~dr-~Grk~~l~~~~~~~~~---~~~~~~----------~~~~~~~l~~~r~l~G~~~g~ 85 (420)
.....+.++-.+|....++.-=+ -.+|++.+ ..+.-.+ ..++|. +.+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 35567888888888876653211 02444433 2222222 222221 223556677778899999998
Q ss_pred hhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhH
Q 014686 86 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 126 (420)
Q Consensus 86 ~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 126 (420)
.... ..+..+..++++|..+-.+......+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776 8888999999999999888888889998888877633
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=66.04 E-value=1.1e+02 Score=27.93 Aligned_cols=82 Identities=15% Similarity=-0.004 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhhhccCCCCCCCchHHH
Q 014686 317 AFLLNCASVVKNLLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQKRLDASFLPGSQMVF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~g~~~~f 396 (420)
..++......+|...+.-.|....+.++.. ++.....+.....-.+|+..+.....++.--.. |..-.-
T Consensus 105 ~~Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~L---------Gl~rta 173 (508)
T COG4262 105 RLVLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRL---------GLVRTA 173 (508)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhh---------ccHHHH
Confidence 344555555555555666677776666511 112222222333467777666666555443221 333334
Q ss_pred HHHHHHHHHHHHH
Q 014686 397 FVLNVVEAIGVLM 409 (420)
Q Consensus 397 ~~~~~~~~~~~~~ 409 (420)
.+.+.+.+++.+.
T Consensus 174 ~laG~~Nl~aAvv 186 (508)
T COG4262 174 ALAGLCNLAAAVV 186 (508)
T ss_pred HHHHHHHHHHHHH
Confidence 4455555555433
No 305
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=63.10 E-value=21 Score=32.22 Aligned_cols=112 Identities=15% Similarity=0.151 Sum_probs=78.7
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhhhhcCCchh--HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhccchhhh-Hh
Q 014686 15 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV--IIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KA 91 (420)
Q Consensus 15 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~--l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~-~~ 91 (420)
..+-|..-++..+..+++.+..|.+.-++.|..- +..+.+..+...++++-++++|..+++-.+.+.-.....+. ..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 3456788888889999999999999988877643 34445555555566667788998888888877766666665 77
Q ss_pred hhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 92 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 92 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
-+++...+|.-|..+|+.... +-++-.++.-...|
T Consensus 350 ~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 788888888888888876543 33333444433343
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.34 E-value=92 Score=24.29 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=31.4
Q ss_pred hhhHHHHHHHHHHhhhcCCcchhhHHhhHHHHHHHHHHHH
Q 014686 329 LLSVSIITGLFILQNRAVDQDQRGAANGIAMTGMSLFKAA 368 (420)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 368 (420)
+++.+...+.+-+++..-+++..|+..|+-.+-.+++...
T Consensus 106 ~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 106 FFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4456666777888888889999999999998888876543
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.15 E-value=88 Score=22.58 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=29.7
Q ss_pred CcchhhHHhhHHHHHHHHHHHHhhhhhhHHHHhhh
Q 014686 347 DQDQRGAANGIAMTGMSLFKAAGPAGGGALFSWAQ 381 (420)
Q Consensus 347 ~~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~ 381 (420)
.++.++.+.++--..-.+++++.....|++.|++-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678888888888889999999999999999884
No 308
>PRK11469 hypothetical protein; Provisional
Probab=51.17 E-value=1.3e+02 Score=24.44 Aligned_cols=51 Identities=10% Similarity=-0.000 Sum_probs=29.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
+.+.........+...........+++++.++.++|....-+.++..++.-
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445554445555555555667777777777666666666555543
No 309
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=50.52 E-value=3.2 Score=35.31 Aligned_cols=65 Identities=8% Similarity=0.044 Sum_probs=39.8
Q ss_pred CCchhhhccchhHHHHHHHHHHHHhhhhhHHHHHHHhhcCcccCCccCCchhhHHHHHHHHHHHHHHHHH
Q 014686 206 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 275 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 275 (420)
+..+..-+++-.+....+.+.+.-...-....+++.|..+. .+++....+++-.+..+.....+.
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfvidd-----lqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDD-----LQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeeh-----hhHHHHHhhhhHHHHHHhhhhHHh
Confidence 34566677777777777777766554444444555444433 667777667766666666655555
No 310
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=49.67 E-value=2.4e+02 Score=27.50 Aligned_cols=26 Identities=8% Similarity=0.167 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhch
Q 014686 261 EVLAITGFSLLVFQLSLYPFLERILGP 287 (420)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (420)
.......+.+.+++. .+.++-+.++.
T Consensus 301 ~~i~~y~~~~~iaGy-~S~~~yk~~~g 326 (521)
T PF02990_consen 301 AAIILYALTSFIAGY-VSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHHhhHHHH-HHHHHHHHcCC
Confidence 334444555555555 55555555543
No 311
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=47.24 E-value=1.4e+02 Score=23.66 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=24.3
Q ss_pred CchhhHHHHHHH--HHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHHH
Q 014686 254 YSTQMVGEVLAI--TGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLT 303 (420)
Q Consensus 254 ~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 303 (420)
+.....|...++ .++.++++++ +...+-+| .+.-.-+..+.+.-++...
T Consensus 63 wk~t~~G~~igi~~~gv~Si~aAl-lY~~~l~k~~g~W~Gi~YG~~~W~ivF~ 114 (173)
T PF11085_consen 63 WKNTWLGNLIGIVFIGVFSIVAAL-LYYALLKKFKGPWPGILYGLAWWAIVFF 114 (173)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 444455554433 3555666666 44444444 4444555555555444333
No 312
>COG4769 Predicted membrane protein [Function unknown]
Probab=47.16 E-value=34 Score=26.79 Aligned_cols=52 Identities=17% Similarity=0.322 Sum_probs=34.5
Q ss_pred HHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014686 24 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 81 (420)
Q Consensus 24 ~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 81 (420)
.+.....+.+...-++..++|+|.+-.++.-. ..++.+|..++++.+++.+-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 34445555666667788899988875444322 33567888888888877654
No 313
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=46.28 E-value=2.1e+02 Score=25.23 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=36.4
Q ss_pred HHHHHHHhhhhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhc
Q 014686 72 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 128 (420)
Q Consensus 72 l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 128 (420)
--..|.+.|+-.=.+.|.++++.-.+|++++--..--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888877677788899999999655433333334444555566666654443
No 314
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=45.93 E-value=1.6e+02 Score=28.25 Aligned_cols=55 Identities=11% Similarity=0.046 Sum_probs=42.0
Q ss_pred HHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 75 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 75 ~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
.-.+.-+..-....+ .+.-+++.+|.--|+.|.+.+...|+|+---..+.-++.|
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 345555555555555 8889999999999999999999999988776666666666
No 315
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=45.45 E-value=81 Score=26.97 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=16.0
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHH
Q 014686 277 LYPFLERILGPIMVARIAGVLTIPL 301 (420)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.++.+..|+..|++...+.++..+.
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHHH
Confidence 5667778877776666655554443
No 316
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=43.55 E-value=94 Score=25.19 Aligned_cols=23 Identities=17% Similarity=0.556 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCC
Q 014686 23 SSFMFGRALTSVFWGLVADRYGR 45 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Gr 45 (420)
.-|.+++.+...+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778888999999999999875
No 317
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=41.43 E-value=2.3e+02 Score=24.41 Aligned_cols=18 Identities=6% Similarity=-0.094 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 014686 154 LCISLFAFGVTIAAFWLP 171 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~ 171 (420)
.+..++.++......+++
T Consensus 119 ~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIK 136 (254)
T ss_pred HHHHHHHHHHHHheeeec
Confidence 333333344333333443
No 318
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.31 E-value=1e+02 Score=23.96 Aligned_cols=41 Identities=17% Similarity=0.350 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHH
Q 014686 23 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 63 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~ 63 (420)
.-|.++..+...+.|++.||..+++..........++....
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 45777888888999999999887643333333333333333
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=41.20 E-value=62 Score=23.29 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 65 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~ 65 (420)
.|=+.++|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 677888899999999999999999988777667777666666655443
No 320
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=39.99 E-value=23 Score=29.54 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=32.6
Q ss_pred HHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHh
Q 014686 76 RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 127 (420)
Q Consensus 76 r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 127 (420)
-.-.|+|+|....+ ..-+.+.+|+ ......++-.+.+.+..+.|-.+.-++
T Consensus 178 AMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 178 AMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567887777665 7777777764 455666666666666666665554443
No 321
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=39.71 E-value=1.4e+02 Score=22.83 Aligned_cols=26 Identities=15% Similarity=0.026 Sum_probs=20.1
Q ss_pred hhhcCCcchhhHHhhHHHHHHHHHHH
Q 014686 342 QNRAVDQDQRGAANGIAMTGMSLFKA 367 (420)
Q Consensus 342 ~~~~~~~~~~g~~~g~~~~~~~~g~~ 367 (420)
+.+++||..|..+.+..+........
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999888766655443
No 322
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=37.71 E-value=98 Score=19.01 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 014686 271 LVFQLSLYPFLERILGPIMVARIAGVLTIPL 301 (420)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
+.....++.++|++++.++.......+..+.
T Consensus 14 i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 14 ILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 3344558889999988866655554444433
No 323
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=37.22 E-value=1.2e+02 Score=23.36 Aligned_cols=27 Identities=19% Similarity=0.075 Sum_probs=20.3
Q ss_pred HhhhcCCcchhhHHhhHHHHHHHHHHH
Q 014686 341 LQNRAVDQDQRGAANGIAMTGMSLFKA 367 (420)
Q Consensus 341 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ 367 (420)
-+.+++||..|..+....+........
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ks 83 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVKS 83 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 356889999999998887766655443
No 324
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=36.54 E-value=1.9e+02 Score=27.33 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=8.6
Q ss_pred CCchhhhccchhHHHHHH
Q 014686 206 ATPKKSLLKNWPLMSSII 223 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~ 223 (420)
+....+-+.+.+....++
T Consensus 241 ~~tpae~le~S~~l~~li 258 (453)
T PF02667_consen 241 RATPAERLENSRILSLLI 258 (453)
T ss_pred cCCHHHHHhccHHHHHHH
Confidence 344455555555544333
No 325
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=35.06 E-value=30 Score=22.06 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=18.2
Q ss_pred cccccccccCccchHHHHHHHHHH----HHHHHHHHhccccc
Q 014686 137 LFSSESLFGKFPYFLPCLCISLFA----FGVTIAAFWLPETL 174 (420)
Q Consensus 137 ~~gw~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~e~~ 174 (420)
++||+..+ .|..+++..+.. ++-++.++.+|+.+
T Consensus 23 ~~gid~~~----vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 23 YFGIDPTL----VRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHCcCHHH----HHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 56666544 455554444432 22345567788765
No 326
>PRK02237 hypothetical protein; Provisional
Probab=35.00 E-value=1.1e+02 Score=22.19 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 65 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~ 65 (420)
.|=+.++|.-.+.+.++.+++..|+.-+-+-=.++..+..++..+..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 678888888899999999999999987766656666666666554433
No 327
>TIGR00366 conserved hypothetical integral membrane protein.
Probab=34.88 E-value=2e+02 Score=27.01 Aligned_cols=16 Identities=19% Similarity=0.229 Sum_probs=7.8
Q ss_pred chhhhccchhHHHHHH
Q 014686 208 PKKSLLKNWPLMSSII 223 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~ 223 (420)
...+-+.+.+....++
T Consensus 240 tpae~le~S~~l~~li 255 (438)
T TIGR00366 240 TIAEKLENSRVLALLI 255 (438)
T ss_pred ChHHHHhcCHHHHHHH
Confidence 4445555555544433
No 328
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.26 E-value=90 Score=24.36 Aligned_cols=52 Identities=13% Similarity=0.069 Sum_probs=34.3
Q ss_pred hhHHHHHHHHHHhhhhccchhhhHhhhhhhchhhhhhhHHHHHHHHhHHHHHHH
Q 014686 67 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 120 (420)
Q Consensus 67 ~~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 120 (420)
+++..++..-.+.|+| .....+..++..+++++.|..+|+-.+-.|++-+.-
T Consensus 95 P~~~~~~~S~~~Fg~g--llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLG--LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHH--HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 4555555555555543 233346667777888888999999888888776543
No 329
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=34.00 E-value=3.6e+02 Score=24.49 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=16.5
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHH
Q 014686 277 LYPFLERILGPIMVARIAGVLTIPL 301 (420)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
+.+.+.|++|.|..+.++.......
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3347778889988877665554433
No 330
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=30.53 E-value=4.3e+02 Score=24.28 Aligned_cols=78 Identities=13% Similarity=0.090 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHH----HHHHH-hhh----hhHHHHHHHHHHhhhhccchhh
Q 014686 18 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI----FNTLF-GLS----VNFWMAVLTRFLLGSLNGLLGP 88 (420)
Q Consensus 18 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~----~~~~~-~~~----~~~~~l~~~r~l~G~~~g~~~~ 88 (420)
.+.+.+.|.....+|+...-++.|.--.-+.+..-.++..+ ...++ .|+ ++-+.+++.-+..|.-.|.-.|
T Consensus 45 ~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiP 124 (508)
T COG4262 45 TSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIP 124 (508)
T ss_pred hHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchH
Confidence 78899999999999999888888754333222222222211 11122 233 4667888888899998888888
Q ss_pred h-Hhhhhh
Q 014686 89 I-KAYACE 95 (420)
Q Consensus 89 ~-~~~i~~ 95 (420)
. +.++..
T Consensus 125 L~mrml~~ 132 (508)
T COG4262 125 LLMRMLQR 132 (508)
T ss_pred HHHHHHHH
Confidence 6 776655
No 331
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=30.51 E-value=3e+02 Score=22.49 Aligned_cols=22 Identities=18% Similarity=0.022 Sum_probs=13.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHH
Q 014686 254 YSTQMVGEVLAITGFSLLVFQL 275 (420)
Q Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~ 275 (420)
-|+.+-...+...+++.++.-+
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~ll 168 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPALL 168 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHHH
Confidence 3555666666666777655543
No 332
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=30.11 E-value=1.2e+02 Score=19.52 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHhhhhccchhhhHhhhhhhchhhhhh
Q 014686 68 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 103 (420)
Q Consensus 68 ~~~~l~~~r~l~G~~~g~~~~~~~~i~~~~~~~~r~ 103 (420)
++..+......-++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 444444444444455555555577888888774443
No 333
>CHL00031 psbT photosystem II protein T
Probab=29.42 E-value=1e+02 Score=16.69 Aligned_cols=17 Identities=18% Similarity=0.301 Sum_probs=10.2
Q ss_pred HHHHHHHhcccccCCCC
Q 014686 162 GVTIAAFWLPETLHRHN 178 (420)
Q Consensus 162 ~~~~~~~~l~e~~~~~~ 178 (420)
..+....+++|+|+-.+
T Consensus 15 gilFFAI~FRePPri~k 31 (33)
T CHL00031 15 GIIFFAIFFREPPKVPT 31 (33)
T ss_pred HHHHHhheecCCCCCCC
Confidence 33455667788776543
No 334
>PRK10720 uracil transporter; Provisional
Probab=29.28 E-value=4.9e+02 Score=24.58 Aligned_cols=13 Identities=0% Similarity=-0.240 Sum_probs=5.8
Q ss_pred HHHHhcccccCCC
Q 014686 165 IAAFWLPETLHRH 177 (420)
Q Consensus 165 ~~~~~l~e~~~~~ 177 (420)
++-..+|+.++++
T Consensus 400 ~Lnlll~~~~~~~ 412 (428)
T PRK10720 400 GLSLIFKLISKLR 412 (428)
T ss_pred HHHHHhccccccc
Confidence 3444455544443
No 335
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=28.45 E-value=2e+02 Score=19.86 Aligned_cols=43 Identities=16% Similarity=0.114 Sum_probs=29.5
Q ss_pred HHHHHHhhhhhhhhhhhcCC-------chhHHHHHHHHHHHHHHHhhhhh
Q 014686 26 MFGRALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVN 68 (420)
Q Consensus 26 ~~~~~~~~~~~g~l~dr~Gr-------k~~l~~~~~~~~~~~~~~~~~~~ 68 (420)
..+.....+.++++.+|.-+ ++.+.++.++...+.++++..+|
T Consensus 28 ~a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 28 WAGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 34445566777777777655 67777777777777777776554
No 336
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=25.70 E-value=4.4e+02 Score=22.78 Aligned_cols=25 Identities=16% Similarity=0.106 Sum_probs=18.2
Q ss_pred ccchhhh-HhhhhhhchhhhhhhHHH
Q 014686 83 NGLLGPI-KAYACEIFREEHQALGLS 107 (420)
Q Consensus 83 ~g~~~~~-~~~i~~~~~~~~r~~~~~ 107 (420)
-|.-... .+++.+..|+++|.|+.-
T Consensus 30 L~iDN~iviai~~~~Lp~~qr~ral~ 55 (254)
T COG0861 30 LGIDNAIVIAILASKLPPKQRKKALF 55 (254)
T ss_pred HHhhHHHHHHHHHhhCCHHHHHHHHH
Confidence 4455555 888999999988877643
No 337
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=25.39 E-value=3.9e+02 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=14.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 284 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 284 (420)
|.+.........+...........+++.+.++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~ 184 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKK 184 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444444444444444334344444444
No 338
>PLN02878 homogentisate phytyltransferase
Probab=23.43 E-value=3.6e+02 Score=23.69 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=16.6
Q ss_pred hcCCchhHHHHHHHHHHHHHHH
Q 014686 42 RYGRKPVIIMGTASVVIFNTLF 63 (420)
Q Consensus 42 r~Grk~~l~~~~~~~~~~~~~~ 63 (420)
|+|+|++..++..+..++....
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~ 216 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAA 216 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHH
Confidence 6888888888877777776643
No 339
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=23.42 E-value=1.6e+02 Score=26.38 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=38.4
Q ss_pred HHHHHHHHHhhhhccchhhh-HhhhhhhchhhhhhhHHHHHHHHhHHHHHHHHHHHhHhcc
Q 014686 70 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 129 (420)
Q Consensus 70 ~~l~~~r~l~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 129 (420)
..+.++-++.|++.+.+..- ...-.|.+.. +++...-++....+.|...||.++..+..
T Consensus 209 ~aF~isa~~AGiAGaL~a~~~~~v~p~~f~~-~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~~ 268 (314)
T COG4177 209 LAFVISAAIAGIAGALYALYLGFVSPESFSF-TLSIEVLAMVVLGGAGTLFGALLGAVLVV 268 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhceeChhhccH-HHHHHHHHHHHHcCccccHHHHHHHHHHH
Confidence 45677777888876666554 4444444442 34555555666677788888888888774
No 340
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.13 E-value=2e+02 Score=18.01 Aligned_cols=26 Identities=12% Similarity=0.189 Sum_probs=13.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcccc
Q 014686 148 PYFLPCLCISLFAFGVTIAAFWLPET 173 (420)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~e~ 173 (420)
++....++..+.+++.....-.+|++
T Consensus 30 n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 30 NFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34444455555555544444455543
No 341
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=23.05 E-value=2.7e+02 Score=19.37 Aligned_cols=8 Identities=25% Similarity=0.596 Sum_probs=4.1
Q ss_pred cccccCCC
Q 014686 170 LPETLHRH 177 (420)
Q Consensus 170 l~e~~~~~ 177 (420)
+|||+..+
T Consensus 1 MPkSk~rK 8 (87)
T PF06781_consen 1 MPKSKVRK 8 (87)
T ss_pred CCCccccc
Confidence 36665443
No 342
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=22.06 E-value=2e+02 Score=21.37 Aligned_cols=13 Identities=23% Similarity=0.189 Sum_probs=8.8
Q ss_pred HHHHHhcccccCC
Q 014686 164 TIAAFWLPETLHR 176 (420)
Q Consensus 164 ~~~~~~l~e~~~~ 176 (420)
++.++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 4567778877654
No 343
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=21.73 E-value=5.7e+02 Score=22.71 Aligned_cols=19 Identities=11% Similarity=0.167 Sum_probs=11.4
Q ss_pred hhhhccchhHHHHHHHHHH
Q 014686 209 KKSLLKNWPLMSSIIVYCV 227 (420)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~ 227 (420)
.++.+|+|..|.-++....
T Consensus 44 ~~~~l~~~~W~~G~~~~~~ 62 (300)
T PF05653_consen 44 GRSYLRRPLWWIGLLLMVL 62 (300)
T ss_pred hhHHHhhHHHHHHHHHHhc
Confidence 3466777777765554443
No 344
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.92 E-value=3.9e+02 Score=20.83 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCCchhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 014686 23 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 78 (420)
Q Consensus 23 s~~~~~~~~~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 78 (420)
-.++++..+.+...-.+..|..||+.=..+. ++..+.++|..|++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 4566677777777778888887766544432 2334567777777777665
No 345
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.42 E-value=1.2e+03 Score=25.92 Aligned_cols=17 Identities=12% Similarity=-0.152 Sum_probs=11.5
Q ss_pred HHHHHhhhhhhHHHHhh
Q 014686 364 LFKAAGPAGGGALFSWA 380 (420)
Q Consensus 364 ~g~~~g~~~~g~l~~~~ 380 (420)
.|+++|-.+...+....
T Consensus 142 gGGIIG~lLs~lL~~Lf 158 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLL 158 (1355)
T ss_pred ccchHHHHHHHHHHHHH
Confidence 46677777766666666
No 346
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=20.08 E-value=1.6e+02 Score=19.69 Aligned_cols=32 Identities=13% Similarity=0.093 Sum_probs=24.5
Q ss_pred hhhhhcCCchhHHHHHHHHHHHHHHHhhhhhH
Q 014686 38 LVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 69 (420)
Q Consensus 38 ~l~dr~Grk~~l~~~~~~~~~~~~~~~~~~~~ 69 (420)
.--|+-.|++-+.+.+.+-..+.++..+....
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34567778888988888888888887777654
No 347
>TIGR02908 CoxD_Bacillus cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli.
Probab=20.06 E-value=3.6e+02 Score=19.72 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=23.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHH
Q 014686 253 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 289 (420)
Q Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (420)
.++....-......++..++.++...--++++ ++..
T Consensus 50 ~l~~~~~~~~I~~lAvvQi~VqL~yFLHm~~k-~~~~ 85 (110)
T TIGR02908 50 EIDKWFVIPFILLLAAVQVAFQLYYFMHMKDK-GHEV 85 (110)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHheeeCCC-ccch
Confidence 45666666666677888888888555455553 4443
Done!