Query 014689
Match_columns 420
No_of_seqs 276 out of 1908
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 16:05:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qu6_A Protein kinase PKR; dsR 100.0 1.5E-32 5.2E-37 251.3 16.4 155 71-228 12-175 (179)
2 2yt4_A Protein DGCR8; DSRBD, R 100.0 2.5E-28 8.7E-33 232.6 16.9 151 70-227 20-200 (232)
3 2l3j_A Double-stranded RNA-spe 99.9 3.3E-25 1.1E-29 211.3 19.1 146 71-226 3-226 (236)
4 3adg_A F21M12.9 protein; HYL1, 99.8 1E-18 3.4E-23 138.3 10.0 70 71-141 2-72 (73)
5 3adj_A F21M12.9 protein; HYL1, 99.8 1.7E-18 5.8E-23 138.3 8.9 70 72-142 4-74 (76)
6 3adj_A F21M12.9 protein; HYL1, 99.8 1.7E-18 5.8E-23 138.3 8.6 71 156-226 3-75 (76)
7 3adg_A F21M12.9 protein; HYL1, 99.8 3.4E-18 1.2E-22 135.3 9.9 69 156-224 2-72 (73)
8 3adl_A RISC-loading complex su 99.7 3.8E-18 1.3E-22 140.6 9.8 74 69-144 12-86 (88)
9 1di2_A XLRBPA, double stranded 99.7 2.8E-18 9.5E-23 134.3 8.1 67 73-141 1-68 (69)
10 2cpn_A TAR RNA-binding protein 99.7 8.2E-18 2.8E-22 138.7 10.9 73 154-227 13-87 (89)
11 1di2_A XLRBPA, double stranded 99.7 7.4E-18 2.5E-22 131.8 9.0 66 158-224 1-68 (69)
12 2cpn_A TAR RNA-binding protein 99.7 9E-18 3.1E-22 138.5 9.6 71 71-143 15-86 (89)
13 3adl_A RISC-loading complex su 99.7 1.6E-17 5.6E-22 136.7 10.8 70 156-226 14-85 (88)
14 1uhz_A Staufen (RNA binding pr 99.7 1.2E-17 4E-22 137.8 9.7 71 71-143 5-76 (89)
15 1uhz_A Staufen (RNA binding pr 99.7 2.4E-17 8.3E-22 135.9 10.8 70 156-226 5-76 (89)
16 2l2n_A Hyponastic leave 1; DSR 99.7 1.2E-17 4E-22 141.2 9.1 78 68-146 13-91 (103)
17 2dix_A Interferon-inducible do 99.7 2.6E-17 9E-22 134.1 10.6 71 70-143 6-77 (84)
18 2khx_A Ribonuclease 3; drosha, 99.7 6.6E-18 2.3E-22 138.2 6.5 70 72-142 1-76 (85)
19 1ekz_A DSRBDIII, maternal effe 99.7 8.2E-18 2.8E-22 134.0 6.7 69 71-142 6-75 (76)
20 2khx_A Ribonuclease 3; drosha, 99.7 1.9E-17 6.6E-22 135.4 7.6 69 157-225 1-76 (85)
21 2l2n_A Hyponastic leave 1; DSR 99.7 4E-17 1.4E-21 138.0 9.6 74 155-228 15-90 (103)
22 3llh_A RISC-loading complex su 99.7 2.8E-17 9.4E-22 135.5 8.2 73 69-144 11-84 (90)
23 2dix_A Interferon-inducible do 99.7 6.1E-17 2.1E-21 131.9 9.5 70 156-227 7-78 (84)
24 1ekz_A DSRBDIII, maternal effe 99.7 1.2E-17 4.2E-22 133.0 5.2 69 155-225 5-75 (76)
25 2b7t_A Double-stranded RNA-spe 99.7 5.7E-17 1.9E-21 128.4 8.2 68 71-142 3-71 (73)
26 1x49_A Interferon-induced, dou 99.7 4.4E-17 1.5E-21 136.4 7.8 73 70-144 12-85 (97)
27 1x49_A Interferon-induced, dou 99.7 4.9E-17 1.7E-21 136.1 7.8 73 155-228 12-86 (97)
28 3llh_A RISC-loading complex su 99.7 1.1E-16 3.7E-21 132.0 9.4 71 155-227 12-84 (90)
29 1x48_A Interferon-induced, dou 99.7 1.3E-16 4.6E-21 131.1 9.3 73 70-145 4-77 (88)
30 1whq_A RNA helicase A; double- 99.7 6.3E-17 2.2E-21 136.0 7.4 73 71-145 5-78 (99)
31 2b7t_A Double-stranded RNA-spe 99.7 2E-16 6.9E-21 125.2 8.7 67 156-225 3-71 (73)
32 1whq_A RNA helicase A; double- 99.7 1.3E-16 4.6E-21 134.0 8.1 70 156-226 5-76 (99)
33 1x48_A Interferon-induced, dou 99.7 2.8E-16 9.5E-21 129.2 9.5 71 156-228 5-77 (88)
34 1x47_A DGCR8 protein; structur 99.7 5.1E-16 1.7E-20 130.1 11.1 72 154-226 13-85 (98)
35 1x47_A DGCR8 protein; structur 99.6 5.4E-16 1.8E-20 129.9 9.6 73 70-145 14-87 (98)
36 1t4n_A Ribonuclease III; DSRBD 99.6 1E-16 3.5E-21 134.0 4.6 70 71-142 5-75 (94)
37 1whn_A Hypothetical protein ri 99.6 4.9E-16 1.7E-20 136.4 9.1 69 156-225 25-94 (128)
38 2dmy_A Spermatid perinuclear R 99.6 4.1E-16 1.4E-20 130.4 7.9 70 69-142 13-83 (97)
39 1uil_A Double-stranded RNA-bin 99.6 5.5E-16 1.9E-20 133.1 8.6 75 71-147 25-104 (113)
40 2dmy_A Spermatid perinuclear R 99.6 1.1E-15 3.8E-20 127.7 10.2 70 153-225 12-83 (97)
41 1uil_A Double-stranded RNA-bin 99.6 8.3E-16 2.9E-20 132.0 8.8 69 157-226 26-100 (113)
42 1t4n_A Ribonuclease III; DSRBD 99.6 3.2E-16 1.1E-20 131.0 6.0 70 156-226 5-76 (94)
43 1t4o_A Ribonuclease III; RNT1P 99.6 3.3E-16 1.1E-20 135.6 6.2 73 70-144 6-79 (117)
44 1whn_A Hypothetical protein ri 99.6 9.6E-16 3.3E-20 134.5 8.8 74 68-144 22-96 (128)
45 2l33_A Interleukin enhancer-bi 99.6 1.3E-15 4.5E-20 126.4 8.6 69 156-227 13-83 (91)
46 2l33_A Interleukin enhancer-bi 99.6 6.9E-16 2.4E-20 128.1 6.5 69 72-144 14-83 (91)
47 2ljh_A Double-stranded RNA-spe 99.6 2E-15 6.9E-20 130.1 7.6 71 68-145 33-104 (114)
48 1t4o_A Ribonuclease III; RNT1P 99.6 2.3E-15 8E-20 130.3 7.2 69 156-225 7-77 (117)
49 2b7v_A Double-stranded RNA-spe 99.6 9.2E-15 3.1E-19 114.9 8.3 66 71-143 3-69 (71)
50 2ljh_A Double-stranded RNA-spe 99.5 9.4E-15 3.2E-19 126.0 8.4 66 156-227 36-103 (114)
51 2b7v_A Double-stranded RNA-spe 99.5 2.9E-14 9.9E-19 112.1 9.4 65 156-226 3-69 (71)
52 1qu6_A Protein kinase PKR; dsR 99.5 1.2E-14 4.1E-19 132.7 7.1 69 157-226 13-83 (179)
53 3p1x_A Interleukin enhancer-bi 99.5 2.1E-13 7.4E-18 108.7 9.1 66 159-227 6-73 (75)
54 3p1x_A Interleukin enhancer-bi 99.4 1.1E-13 3.8E-18 110.3 6.8 67 71-144 6-73 (75)
55 2nug_A Ribonuclease III, RNAse 99.4 1.1E-13 3.9E-18 129.5 7.4 70 71-142 149-219 (221)
56 1o0w_A Ribonuclease III, RNAse 99.4 1.7E-13 5.9E-18 131.1 8.4 73 70-143 177-250 (252)
57 2yt4_A Protein DGCR8; DSRBD, R 99.4 4.3E-13 1.5E-17 127.6 11.0 71 155-226 20-91 (232)
58 2nug_A Ribonuclease III, RNAse 99.4 2.2E-13 7.6E-18 127.6 8.4 68 156-224 149-218 (221)
59 1o0w_A Ribonuclease III, RNAse 99.4 3E-13 1E-17 129.4 9.1 71 156-226 178-250 (252)
60 3n3w_A Ribonuclease III; nucle 99.3 7.1E-14 2.4E-18 133.9 -0.3 72 70-142 175-247 (248)
61 2a11_A Ribonuclease III, RNAse 99.3 1E-13 3.4E-18 131.6 -0.6 73 71-144 161-233 (242)
62 3n3w_A Ribonuclease III; nucle 99.3 2.3E-13 7.9E-18 130.4 0.0 70 156-225 176-247 (248)
63 2a11_A Ribonuclease III, RNAse 99.3 4E-13 1.4E-17 127.4 0.0 72 156-227 161-233 (242)
64 2l3j_A Double-stranded RNA-spe 99.2 1.5E-11 5.2E-16 117.0 8.8 68 70-144 159-227 (236)
65 3rv0_A K. polysporus DCR1; RNA 98.9 1.6E-10 5.5E-15 115.8 0.0 68 71-144 253-322 (341)
66 3rv0_A K. polysporus DCR1; RNA 98.9 1.9E-10 6.3E-15 115.4 0.0 69 156-227 253-322 (341)
67 3c4b_A Endoribonuclease dicer; 98.6 4.3E-08 1.5E-12 93.8 7.5 67 158-226 198-264 (265)
68 3c4b_A Endoribonuclease dicer; 98.5 9.4E-08 3.2E-12 91.4 5.0 67 73-143 198-264 (265)
69 2kou_A Dicer-like protein 4; A 96.6 0.0044 1.5E-07 52.0 6.9 70 157-227 4-82 (102)
70 2kou_A Dicer-like protein 4; A 93.2 0.11 3.7E-06 43.5 5.1 73 72-146 4-84 (102)
71 3htx_A HEN1; HEN1, small RNA m 89.5 0.28 9.5E-06 55.0 4.8 67 157-227 17-97 (950)
72 3htx_A HEN1; HEN1, small RNA m 82.3 1.2 4E-05 50.1 5.1 68 72-144 17-97 (950)
73 2db2_A KIAA0890 protein; DSRM 75.4 3.2 0.00011 35.6 4.6 74 68-146 13-93 (119)
74 2db2_A KIAA0890 protein; DSRM 75.0 4.6 0.00016 34.7 5.4 69 157-226 17-90 (119)
75 1tac_A TAT protein; transcript 33.8 16 0.00054 29.8 1.5 35 378-413 43-77 (86)
76 3mi9_C Protein TAT; P-TEFB, HI 25.4 15 0.00053 29.9 0.1 35 378-413 43-77 (86)
77 2z8u_A Tata-box-binding protei 21.0 1.8E+02 0.0063 26.3 6.4 116 102-224 56-183 (188)
No 1
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=100.00 E-value=1.5e-32 Score=251.27 Aligned_cols=155 Identities=23% Similarity=0.242 Sum_probs=134.5
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcccCCC-
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIKDEG- 148 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~~E~- 148 (420)
..|||+.||||||++++. |.|+++. +||+|++.|+++|+|+|..++.| .|+|||+|||+||+.||+.|........
T Consensus 12 ~~n~ks~LqE~~q~~~~~-p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G-~G~sKK~Aeq~AA~~al~~L~~~~~~~~p 89 (179)
T 1qu6_A 12 AGFFMEELNTYRQKQGVV-LKYQELPNSGPPHDRRFTFQVIIDGREFPEG-EGRSKKEAKNAAAKLAVEILNKEKKAVSP 89 (179)
T ss_dssp SCSHHHHHHHHHHHHTCC-CEEEEEESCBTTTBCCEEEEEESSSSCCCEE-ECCSSHHHHHHHHHHHHHHHHSCCSCCSC
T ss_pred CCCHHHHHHHHHHhCCCC-CeEEEeeccCCCCCCeEEEEEEECCEEEEec-CCCCHHHHHHHHHHHHHHHHhcccccCCC
Confidence 479999999999999987 8999886 89999999999999999988887 5999999999999999999987543210
Q ss_pred ----CC--CCCCCCCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHH
Q 014689 149 ----CP--LINQDTVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIR 221 (420)
Q Consensus 149 ----lp--~~~e~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~ 221 (420)
.+ ..+....|||++||||||+++|.+ .|++... ++|.+.|+|+|.|+|+.|+.|.|+|||+||++||+.||.
T Consensus 90 ~~~~~~~~~e~~~~~n~~~~L~E~~qk~~~~~-~Y~~~~~G~~h~~~F~~~v~v~~~~~~~g~g~sKK~Ak~~AA~~al~ 168 (179)
T 1qu6_A 90 LLLTTTNSSEGLSMGNYIGLINRIAQKKRLTV-NYEQCASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYL 168 (179)
T ss_dssp SSCCCSCSSCCCCCCCCHHHHHHHHHHSCCEE-EEEEEEECSSSSSEEEEEEEEETTBCCEEEESSHHHHHHHHHHHHHH
T ss_pred ccCCCCCcccccCCCCHHHHHHHHHHhcCCcc-eEEecCcCCCCCCeEEEEEEECCEEEeeEEECCHHHHHHHHHHHHHH
Confidence 00 112235699999999999999997 9998765 789999999999999988999999999999999999999
Q ss_pred HHHhhcC
Q 014689 222 TLLVTSG 228 (420)
Q Consensus 222 ~L~~~s~ 228 (420)
.|.....
T Consensus 169 ~L~~~~~ 175 (179)
T 1qu6_A 169 QILSEET 175 (179)
T ss_dssp HHHHCCC
T ss_pred HHhcccC
Confidence 9976543
No 2
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.5e-28 Score=232.55 Aligned_cols=151 Identities=25% Similarity=0.216 Sum_probs=124.7
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcccCC-
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIKDE- 147 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~~E- 147 (420)
..+|||+.||||||++++.+|.|+++. +||+ +.|+++|+|+|..|+.| .|+|||+|||+||+.||..|....+..
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~~~~~Gp~--~~F~~~v~v~g~~~~~G-~G~SKK~Aeq~AA~~aL~~L~~~~~~~~ 96 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNFFECENPS--EPFGASVTIDGVTYGSG-TASSKKLAKNKAARATLEILIPDFVKQT 96 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEEEECSCTT--SCEEEEEEETTEEEEEE-EESSHHHHHHHHHHHHHHHHSTTTTTC-
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeeECCC--CcEEEEEEECCEEEeec-CCCCHHHHHHHHHHHHHHHHHhhccccC
Confidence 458999999999999999999999987 7987 99999999999999887 599999999999999999997742210
Q ss_pred ---------C------CCCC---------CCCCCChhHHHHHHHHHcCCCCCcEE--Eeec--CCCCCeEEEEEEECCEE
Q 014689 148 ---------G------CPLI---------NQDTVFCKSILNEFAVKMNLELPAYS--TRQS--EALLPVFVSSLVFNGVT 199 (420)
Q Consensus 148 ---------~------lp~~---------~e~~~n~Ks~LqE~cQk~~~~lP~Y~--~~~~--p~H~~~F~~~V~I~Gk~ 199 (420)
. ++.. .....|||+.||| ||++++.+|.|+ ++.+ ++|.+.|+|+|. + .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~kt~LqE-~~~~~~~~p~Y~~~~~~~~Gp~h~~~F~~~v~--~-~ 172 (232)
T 2yt4_A 97 SEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHE-CLKRNHGMGDTSIKFEVVPGKNQKSEYVMACG--K-H 172 (232)
T ss_dssp -------CCGGGGGGGSBTTCTTHHHHHHHHTCCCHHHHHHH-HHHTSSSCCCEEEECC------CCEEEEEEET--T-E
T ss_pred CccccccccchhhcccccccCCcccccccccCCCChhHHHHH-HHHcCCCCCceEEEEeecCCCCCCCEEEEEEE--E-E
Confidence 0 0000 0123589999999 999999999999 5543 799999999987 4 5
Q ss_pred eeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 200 YTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 200 ~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
++.|.|+|||+|||.||+.||..|....
T Consensus 173 ~~~G~G~sKK~Aeq~AA~~aL~~L~~~~ 200 (232)
T 2yt4_A 173 TVRGWCKNKRVGKQLASQKILQLLHPHV 200 (232)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHhhc
Confidence 6789999999999999999999998765
No 3
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.93 E-value=3.3e-25 Score=211.33 Aligned_cols=146 Identities=27% Similarity=0.285 Sum_probs=120.9
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcccC---
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIKD--- 146 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~~--- 146 (420)
..|+|+.|++|++. +..|.|+++. +||+|+++|+++|+|+|..+ .| .|+|||+|||+||+.||+.|......
T Consensus 3 ~~~~K~~l~~l~e~--~~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G-~G~SKK~Aeq~AA~~al~~l~~~~~~~~~ 78 (236)
T 2l3j_A 3 PVLPKNALMQLNEI--KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EG-SGPTKKKAKLHAAEKALRSFVQFPNASEA 78 (236)
T ss_dssp CCCTHHHHHHHHHH--CSSCEEEEEEEESCTTSCEEEEEEEETTEEE-EE-EESHHHHHHHHHHHHHHHHHTTCSSCSCC
T ss_pred CCCCcCHHHHHhhc--CCCceEEEEeccCCCCCCeEEEEEEECCEEE-EE-ecCChHHHHHHHHHHHHHHHHhccccccc
Confidence 36899999999987 3578999987 89999999999999999886 55 69999999999999999999763210
Q ss_pred -----------------C-CCC----------------------------------C--------------------CCC
Q 014689 147 -----------------E-GCP----------------------------------L--------------------INQ 154 (420)
Q Consensus 147 -----------------E-~lp----------------------------------~--------------------~~e 154 (420)
+ +++ + ...
T Consensus 79 ~~amg~~~~~~~d~~~d~~~~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~p~~~~~~~~ 158 (236)
T 2l3j_A 79 HLAMGRTLSVNTDFTSDQADFPDTLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPPP 158 (236)
T ss_dssp CCSCCCCCCCTTSCCSCCSCCCCCCCCCCCCSSSSCCCSSCSSSCSSSSSCSCCCSSCCCCCCCCSSSCSSSSCCCCCCC
T ss_pred hhhhccCCCCCCCCcccccccchhhcccccccccccccccccccccccccccchhhccccccccccccccCccccccCCC
Confidence 0 000 0 000
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
...|||++|||| +..|.|+++.+ ++|.++|+|+|.|+|+.+ .|.|+|||+|||.||+.||..|...
T Consensus 159 ~~~d~ks~LqE~-----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~sKK~Aeq~AA~~al~~L~~~ 226 (236)
T 2l3j_A 159 SGKNPVMILNEL-----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNL 226 (236)
T ss_dssp SSCCHHHHHHHH-----CCCEEEEEECCSSSSSSCCEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHhc-----CCCCcEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHccc
Confidence 235999999999 46789998765 799999999999999876 8999999999999999999999643
No 4
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.77 E-value=1e-18 Score=138.33 Aligned_cols=70 Identities=43% Similarity=0.585 Sum_probs=66.0
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCEEeecCCcc-ccchHHHHHHHHHHHHHHH
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTF-SHRKAAEQDVAKIALECIS 141 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~~~~~Gg~G-sSKKeAEq~AAk~AL~~L~ 141 (420)
..|||+.||||||++++.+|.|+++.+||+|++.|++.|+|+|..++.| .| +|||+||++||+.||..|.
T Consensus 2 ~~d~Kt~LqE~~q~~~~~~p~Y~~~~~Gp~h~~~F~~~v~v~g~~~~~G-~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 2 SHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSL-PGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CCSHHHHHHHHHHHTTCCCCEEEEEEESSTTSCEEEEEEEETTEEEECC-SCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCCEEEEEeECCCCCCeEEEEEEECCEEEEee-eccCCHHHHHHHHHHHHHHHhh
Confidence 3699999999999999999999998899999999999999999999887 59 9999999999999999885
No 5
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.76 E-value=1.7e-18 Score=138.27 Aligned_cols=70 Identities=31% Similarity=0.489 Sum_probs=66.0
Q ss_pred CChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 72 LMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 72 ~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
.|||+.||||||++++.+|.|+++. +||+|++.|++.|+|+|..++.| .|+|||+|||+||+.||..|..
T Consensus 4 ~n~Kt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G-~G~sKK~Aeq~AA~~al~~L~~ 74 (76)
T 3adj_A 4 GLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGA-ATRTKKDAEISAGRTALLAIQS 74 (76)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEEEEECSSSCEEEEEEEEETTEEEECC-CBSSHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCCeEEEeeccCCCCCCcEEEEEEECCEEEEEe-ccCCHHHHHHHHHHHHHHHHhh
Confidence 5899999999999999999999987 89999999999999999999887 5999999999999999999864
No 6
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=99.75 E-value=1.7e-18 Score=138.31 Aligned_cols=71 Identities=31% Similarity=0.563 Sum_probs=65.5
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||||++++.+|.|+++.+ |+|++.|+|.|.|+|+.++.|.|+|||+|||+||+.||..|...
T Consensus 3 ~~n~Kt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~ 75 (76)
T 3adj_A 3 HGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSD 75 (76)
T ss_dssp CHHHHHHHHHHHHTTTCCCCEEEEEEEECSSSCEEEEEEEEETTEEEECCCBSSHHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEeeccCCCCCCcEEEEEEECCEEEEEeccCCHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999764 79999999999999999999999999999999999999999643
No 7
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=99.75 E-value=3.4e-18 Score=135.27 Aligned_cols=69 Identities=35% Similarity=0.531 Sum_probs=65.3
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeee-cCHHHHHHHHHHHHHHHHH
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPG-RSKKEAEQLAARAVIRTLL 224 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G-~SKK~AKq~AA~~AL~~L~ 224 (420)
..|||+.||||||++++.+|.|+++.+ |+|++.|+|.|.|+|+.++.|.| +|||+|||+||+.||..|.
T Consensus 2 ~~d~Kt~LqE~~q~~~~~~p~Y~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 2 SHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp CCSHHHHHHHHHHHTTCCCCEEEEEEESSTTSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCCCEEEEEeECCCCCCeEEEEEEECCEEEEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 358999999999999999999999877 79999999999999999999999 9999999999999999885
No 8
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.75 E-value=3.8e-18 Score=140.58 Aligned_cols=74 Identities=22% Similarity=0.249 Sum_probs=66.9
Q ss_pred CCCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 69 PEHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 69 ~~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
....|||+.||||||++++.+|.|+++. +||+|++.|+|+|+|+|. ++.| .|+|||+|||+||+.||+.|...+
T Consensus 12 ~~~~d~Ks~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G-~G~SKK~Aeq~AA~~AL~~L~~~p 86 (88)
T 3adl_A 12 PRGSHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIG-SGTSKKLAKRNAAAKMLLRVHTVP 86 (88)
T ss_dssp CTTCCHHHHHHHHHHHTTCCCCEEEEEEEESCTTSCEEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCHHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEE-eeCCHHHHHHHHHHHHHHHHHccC
Confidence 3457999999999999999999999977 899999999999999997 8887 599999999999999999997654
No 9
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.74 E-value=2.8e-18 Score=134.26 Aligned_cols=67 Identities=24% Similarity=0.297 Sum_probs=63.2
Q ss_pred ChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHH
Q 014689 73 MHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECIS 141 (420)
Q Consensus 73 npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~ 141 (420)
+||+.||||||++++.+|.|+++. +||+|++.|+++|+|+|. ++.| .|+|||+||++||+.||..|.
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~-~~~G-~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETF-VETG-SGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999877 899999999999999998 8887 699999999999999999885
No 10
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.74 E-value=8.2e-18 Score=138.73 Aligned_cols=73 Identities=25% Similarity=0.205 Sum_probs=66.8
Q ss_pred CCCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 154 QDTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 154 e~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
+...|||+.||||||++++.+|.|+++.+ ++|.+.|+|.|.|+|. ++.|.|+|||+|||.||+.||..|...+
T Consensus 13 ~~~~d~Kt~LqE~~Qk~~~~~P~Y~~~~~~Gp~h~~~F~~~v~i~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~s 87 (89)
T 2cpn_A 13 QSECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVSGPS 87 (89)
T ss_dssp CCCCCHHHHHHHHHHHHTCCCCEEEEEEEECCSSSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCCCeEEEEEEECCE-EEEeeeCCHHHHHHHHHHHHHHHHHhhc
Confidence 34569999999999999999999999764 7999999999999997 9999999999999999999999997554
No 11
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=99.73 E-value=7.4e-18 Score=131.82 Aligned_cols=66 Identities=23% Similarity=0.284 Sum_probs=62.0
Q ss_pred ChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHH
Q 014689 158 FCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLL 224 (420)
Q Consensus 158 n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~ 224 (420)
.||+.||||||++++..|.|+++.+ |+|++.|+|.|.|+|. ++.|.|+|||+|||.||+.||..|.
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~-~~~G~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETF-VETGSGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEeecCCHHHHHHHHHHHHHHHHh
Confidence 3799999999999999999998764 7999999999999998 9999999999999999999999985
No 12
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.73 E-value=9e-18 Score=138.50 Aligned_cols=71 Identities=23% Similarity=0.245 Sum_probs=66.3
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
.+|||+.||||||++++.+|.|+++. +||+|++.|+|+|+|+|. ++.| .|+|||+||++||+.||+.|...
T Consensus 15 ~~d~Kt~LqE~~Qk~~~~~P~Y~~~~~~Gp~h~~~F~~~v~i~g~-~~~G-~G~SKK~Aeq~AA~~AL~~L~~~ 86 (89)
T 2cpn_A 15 ECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIG-SGTSKKLAKRNAAAKMLLRVSGP 86 (89)
T ss_dssp CCCHHHHHHHHHHHHTCCCCEEEEEEEECCSSSCEEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHcCCCCCeEEEEeeECCCCCCeEEEEEEECCE-EEEe-eeCCHHHHHHHHHHHHHHHHHhh
Confidence 47999999999999999999999977 899999999999999998 8887 69999999999999999999753
No 13
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=99.73 E-value=1.6e-17 Score=136.75 Aligned_cols=70 Identities=23% Similarity=0.209 Sum_probs=64.7
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||||++++..|.|+++.+ |+|.+.|+|.|.|+|. ++.|.|+|||+|||+||+.||..|...
T Consensus 14 ~~d~Ks~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 85 (88)
T 3adl_A 14 GSHEVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERF-IEIGSGTSKKLAKRNAAAKMLLRVHTV 85 (88)
T ss_dssp TCCHHHHHHHHHHHTTCCCCEEEEEEEESCTTSCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHcCCCCCEEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHHcc
Confidence 469999999999999999999999765 7999999999999997 999999999999999999999999753
No 14
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.73 E-value=1.2e-17 Score=137.82 Aligned_cols=71 Identities=21% Similarity=0.174 Sum_probs=65.9
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
.+|||+.||||||++++.+|.|+++. +||+|++.|++.|+|+|. ++.| .|+|||+|||+||+.||+.|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G-~G~SKK~Aeq~AA~~AL~~L~~~ 76 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNE-VATG-TGPNKKIAKKNAAEAMLLQLGYK 76 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEEeECCCCCCeEEEEEEECCE-EEEE-eeCCHHHHHHHHHHHHHHHHhcc
Confidence 57999999999999999999999977 899999999999999996 8887 59999999999999999999753
No 15
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.72 E-value=2.4e-17 Score=135.90 Aligned_cols=70 Identities=20% Similarity=0.083 Sum_probs=65.0
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||||++++..|.|+++.+ ++|++.|+|.|.|+|+ ++.|.|+|||+|||+||+.||..|...
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 76 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNE-VATGTGPNKKIAKKNAAEAMLLQLGYK 76 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHTSS
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEEeECCCCCCeEEEEEEECCE-EEEEeeCCHHHHHHHHHHHHHHHHhcc
Confidence 569999999999999999999999764 7999999999999996 899999999999999999999999643
No 16
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.72 E-value=1.2e-17 Score=141.20 Aligned_cols=78 Identities=41% Similarity=0.543 Sum_probs=66.6
Q ss_pred CCCCCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCEEeecCCcc-ccchHHHHHHHHHHHHHHHhcccC
Q 014689 68 VPEHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTF-SHRKAAEQDVAKIALECISKKIKD 146 (420)
Q Consensus 68 l~~~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~~~~~Gg~G-sSKKeAEq~AAk~AL~~L~~~~~~ 146 (420)
+...+|||+.||||||++++.+|.|+++.+||+|++.|++.|+|+|..++.| .| +|||+|||+||+.||+.|......
T Consensus 13 ~~~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~G-~G~~SKK~Aeq~AA~~AL~~L~~~~~~ 91 (103)
T 2l2n_A 13 VSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSL-PGFFNRKAAEQSAAEVALRELAKSSEL 91 (103)
T ss_dssp ------CTTHHHHHHHHTTCCCCEEEEEEESCSSSCEEEEEEEETTEEEECC-SCBSSHHHHHHHHHHHHHHHHHHHC--
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCeEEEEeEcCCCCCeEEEEEEECCEEEEEe-ecCCCHHHHHHHHHHHHHHHHhccccc
Confidence 4556899999999999999999999999899999999999999999999987 59 899999999999999999876543
No 17
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.72 E-value=2.6e-17 Score=134.06 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=65.1
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
..+|||+.||||||+++ ..|.|+++. +||+|++.|+|.|+|+| .++.| .|+|||+|||+||+.||+.|...
T Consensus 6 ~~~d~Ks~LqE~~q~~~-~~p~Y~~~~~~Gp~h~~~F~~~v~v~~-~~~~G-~G~SKK~Aeq~AA~~aL~~L~~~ 77 (84)
T 2dix_A 6 SGKTPIQVLHEYGMKTK-NIPVYECERSDVQIHVPTFTFRVTVGD-ITCTG-EGTSKKLAKHRAAEAAINILKAN 77 (84)
T ss_dssp CCCCHHHHHHHHHHHTT-CCCEEEEEEEECSSSSCEEEEEEEETT-EEEEE-CSSCTTHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHcC-CCCeEEEEEeECCCCCCeEEEEEEECC-EEEEe-eeCCHHHHHHHHHHHHHHHHhcc
Confidence 45899999999999998 689999977 89999999999999999 88887 59999999999999999999754
No 18
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.71 E-value=6.6e-18 Score=138.18 Aligned_cols=70 Identities=23% Similarity=0.196 Sum_probs=63.9
Q ss_pred CChHHHHHHHHHH-----cCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 72 LMHKNRLQEHAQR-----SGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 72 ~npKS~LQE~cQK-----~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
+|||+.||||||+ +++.+|.|+++. +||+|++.|++.|+|+|..++.| .|+|||+|||+||+.||+.|..
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~~~~Gp~H~~~F~v~V~v~g~~~~~G-~G~SKK~AEq~AA~~AL~~L~~ 76 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCG-KGPSIQQAEMGAAMDALEKYNF 76 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEECCCCCSSSCCCEEEEEEETTEECCCE-EESSHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEEEEeECCCCCCcEEEEEEECCEEEEEE-eeCCHHHHHHHHHHHHHHHHhH
Confidence 5899999999998 467789999987 89999999999999999999887 5999999999999999988754
No 19
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.71 E-value=8.2e-18 Score=134.05 Aligned_cols=69 Identities=16% Similarity=0.168 Sum_probs=64.3
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
..|||+.||||||++++. |.|+++. +||+|++.|+|+|+|+| .++.| .|+|||+|||+||+.||..|..
T Consensus 6 ~~d~ks~LqE~~q~~~~~-p~Y~~~~~~Gp~h~~~F~~~v~i~~-~~~~G-~G~sKK~Aeq~AA~~aL~~L~~ 75 (76)
T 1ekz_A 6 KKSPISQVHEIGIKRNMT-VHFKVLREEGPAHMKNFITACIVGS-IVTEG-EGNGKKVSKKRAAEKMLVELQK 75 (76)
T ss_dssp CSCHHHHHHHHHHHTTCC-CEEEESSSCCSSSCSCSSEEEEETT-EEEEE-CCCSTTSSSHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHcCCC-CEEEEEEeECCCCCCcEEEEEEECC-EEEEE-eeCCHHHHHHHHHHHHHHHHhh
Confidence 579999999999999998 9999977 89999999999999999 88887 5999999999999999999864
No 20
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=99.70 E-value=1.9e-17 Score=135.45 Aligned_cols=69 Identities=22% Similarity=0.222 Sum_probs=63.0
Q ss_pred CChhHHHHHHHHH-----cCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 157 VFCKSILNEFAVK-----MNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 157 ~n~Ks~LqE~cQk-----~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
.|||+.||||||+ +++..|.|+++.+ |+|++.|+|.|.|+|+.++.|.|+|||+|||+||+.||..|..
T Consensus 1 ~d~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~~~~Gp~H~~~F~v~V~v~g~~~~~G~G~SKK~AEq~AA~~AL~~L~~ 76 (85)
T 2khx_A 1 NDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNF 76 (85)
T ss_dssp CCSCHHHHHHHHHCCCSSSCCCCCCEEECCCCCSSSCCCEEEEEEETTEECCCEEESSHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHhhhhhhcCCCCCceEEEEEeECCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhH
Confidence 3899999999998 4678899999765 7999999999999999999999999999999999999998754
No 21
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=99.70 E-value=4e-17 Score=137.97 Aligned_cols=74 Identities=34% Similarity=0.505 Sum_probs=66.1
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeee-cCHHHHHHHHHHHHHHHHHhhcC
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPG-RSKKEAEQLAARAVIRTLLVTSG 228 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G-~SKK~AKq~AA~~AL~~L~~~s~ 228 (420)
...|||+.||||||++++.+|.|+++.+ |+|++.|+|.|.|+|+.++.|.| +|||+|||+||+.||..|.....
T Consensus 15 ~~~d~Kt~LqE~~Q~~~~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~G~G~~SKK~Aeq~AA~~AL~~L~~~~~ 90 (103)
T 2l2n_A 15 NCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKSSE 90 (103)
T ss_dssp ----CTTHHHHHHHHTTCCCCEEEEEEESCSSSCEEEEEEEETTEEEECCSCBSSHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeEcCCCCCeEEEEEEECCEEEEEeecCCCHHHHHHHHHHHHHHHHhcccc
Confidence 3469999999999999999999999887 79999999999999999999999 99999999999999999987654
No 22
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.70 E-value=2.8e-17 Score=135.53 Aligned_cols=73 Identities=29% Similarity=0.338 Sum_probs=58.0
Q ss_pred CCCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 69 PEHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 69 ~~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
...+|||+.||||||+++. .|.|+++. +||+|++.|+++|+|+|. ++.| .|+|||+|||+||+.||+.|....
T Consensus 11 ~~~kd~Ks~LqE~~q~~~~-~p~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G-~G~SKK~Aeq~AA~~aL~~L~~~~ 84 (90)
T 3llh_A 11 NPGKTPISLLQEYGTRIGK-TPVYDLLKAEGQAHQPNFTFRVTVGDT-SCTG-QGPSKKAAKHKAAEVALKHLKGGS 84 (90)
T ss_dssp --CCCHHHHHHHHHHHTTC-CCEEEEEEEC-----CCEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHC---
T ss_pred ccCCCHHHHHHHHHHhcCC-CCEEEEEEeECCCCCCcEEEEEEECCE-EEEE-EeCCHHHHHHHHHHHHHHHHHhcc
Confidence 4468999999999999985 79999876 899999999999999997 5676 699999999999999999997654
No 23
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.69 E-value=6.1e-17 Score=131.90 Aligned_cols=70 Identities=26% Similarity=0.357 Sum_probs=64.0
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
..|||+.||||||+++ ..|.|+++.+ |+|++.|+|.|.|+| .++.|.|+|||+|||+||+.||..|....
T Consensus 7 ~~d~Ks~LqE~~q~~~-~~p~Y~~~~~~Gp~h~~~F~~~v~v~~-~~~~G~G~SKK~Aeq~AA~~aL~~L~~~~ 78 (84)
T 2dix_A 7 GKTPIQVLHEYGMKTK-NIPVYECERSDVQIHVPTFTFRVTVGD-ITCTGEGTSKKLAKHRAAEAAINILKANA 78 (84)
T ss_dssp CCCHHHHHHHHHHHTT-CCCEEEEEEEECSSSSCEEEEEEEETT-EEEEECSSCTTHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHcC-CCCeEEEEEeECCCCCCeEEEEEEECC-EEEEeeeCCHHHHHHHHHHHHHHHHhccc
Confidence 4699999999999998 6899999765 799999999999999 88999999999999999999999997543
No 24
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=99.69 E-value=1.2e-17 Score=133.01 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=63.7
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
...|||+.||||||++++. |.|+++.+ |+|.+.|+|+|.|+| .++.|.|+|||+|||.||+.||..|..
T Consensus 5 ~~~d~ks~LqE~~q~~~~~-p~Y~~~~~~Gp~h~~~F~~~v~i~~-~~~~G~G~sKK~Aeq~AA~~aL~~L~~ 75 (76)
T 1ekz_A 5 DKKSPISQVHEIGIKRNMT-VHFKVLREEGPAHMKNFITACIVGS-IVTEGEGNGKKVSKKRAAEKMLVELQK 75 (76)
T ss_dssp CCSCHHHHHHHHHHHTTCC-CEEEESSSCCSSSCSCSSEEEEETT-EEEEECCCSTTSSSHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHcCCC-CEEEEEEeECCCCCCcEEEEEEECC-EEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence 3569999999999999999 99999765 799999999999999 889999999999999999999999853
No 25
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.68 E-value=5.7e-17 Score=128.37 Aligned_cols=68 Identities=28% Similarity=0.323 Sum_probs=62.2
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
..|||+.||||||+ +..|.|+++. +||+|+++|+++|.|+|..+ .| .|+|||+|||+||+.||+.|..
T Consensus 3 ~~d~Ks~Lqe~~q~--~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~G-~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 3 PVLPKNALMQLNEI--KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EG-SGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSSHHHHHHHHHH--CSCCEEEEEEEECSSSSCEEEEEEESSSSEE-EE-EESSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcC--CCCceEEEEEeeCCCCCCeEEEEEEECCEEE-Ee-ecCCHHHHHHHHHHHHHHHHhc
Confidence 47999999999996 6789999977 89999999999999999887 66 6999999999999999999875
No 26
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.68 E-value=4.4e-17 Score=136.40 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=66.6
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
...|||+.||||||++++. |.|+++. +||+|++.|++.|+|+|..++.| .|+|||+|||+||+.||+.|....
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~-p~Y~~~~~~Gp~H~~~F~v~v~i~g~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~~~ 85 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVA-ITYKELSTSGPPHDRRFTFQVLIDEKEFPEA-KGRSKQEARNAAAKLAVDILDNEN 85 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCC-EEEEEEEEESCSSSCEEEEEEEESSCCCCCE-EESSHHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCHHHHHHHHHHHcCCC-CeEEEEEeeCCCCCCcEEEEEEECCEEEEEE-eeCCHHHHHHHHHHHHHHHHHhhc
Confidence 3579999999999999996 7999876 89999999999999999999887 599999999999999999997544
No 27
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.68 E-value=4.9e-17 Score=136.14 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=66.1
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhcC
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTSG 228 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s~ 228 (420)
...|||+.||||||++++. |.|+++.+ |+|.+.|+|.|.|+|+.++.|.|+|||+|||.||+.||..|.....
T Consensus 12 ~~~n~Kt~LqE~~Q~~~~~-p~Y~~~~~~Gp~H~~~F~v~v~i~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~~ 86 (97)
T 1x49_A 12 TPGFYMDKLNKYRQMHGVA-ITYKELSTSGPPHDRRFTFQVLIDEKEFPEAKGRSKQEARNAAAKLAVDILDNENK 86 (97)
T ss_dssp CTTHHHHHHHHHHHHHTCC-EEEEEEEEESCSSSCEEEEEEEESSCCCCCEEESSHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCHHHHHHHHHHHcCCC-CeEEEEEeeCCCCCCcEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHHhhcC
Confidence 3468999999999999997 79998764 7999999999999999999999999999999999999999976543
No 28
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=99.68 E-value=1.1e-16 Score=131.99 Aligned_cols=71 Identities=24% Similarity=0.286 Sum_probs=58.1
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
...|||+.||||||+++. .|.|+++.+ ++|++.|+|+|.|+|+ ++.|.|+|||+|||.||+.||..|...+
T Consensus 12 ~~kd~Ks~LqE~~q~~~~-~p~Y~~~~~~Gp~H~~~F~~~v~v~g~-~~~G~G~SKK~Aeq~AA~~aL~~L~~~~ 84 (90)
T 3llh_A 12 PGKTPISLLQEYGTRIGK-TPVYDLLKAEGQAHQPNFTFRVTVGDT-SCTGQGPSKKAAKHKAAEVALKHLKGGS 84 (90)
T ss_dssp -CCCHHHHHHHHHHHTTC-CCEEEEEEEC-----CCEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC---
T ss_pred cCCCHHHHHHHHHHhcCC-CCEEEEEEeECCCCCCcEEEEEEECCE-EEEEEeCCHHHHHHHHHHHHHHHHHhcc
Confidence 356999999999999985 699998654 7999999999999997 6889999999999999999999997665
No 29
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.67 E-value=1.3e-16 Score=131.14 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=66.0
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEeccCCCCCC-eEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhccc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAP-KFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIK 145 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p-~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~ 145 (420)
...|||+.||||||++++.+ .|+ ..+||+|++ +|++.|+|+|..++.| .|+|||+|||+||+.||+.|....+
T Consensus 4 ~~~d~Kt~LqE~~Q~~~~~~-~Y~-~~~Gp~H~~~~F~~~v~v~g~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~~~~ 77 (88)
T 1x48_A 4 GSSGYIGLVNSFAQKKKLSV-NYE-QCEPNSELPQRFICKCKIGQTMYGTG-SGVTKQEAKQLAAKEAYQKLLKSPP 77 (88)
T ss_dssp SSSCHHHHHHHHHHHTTCCE-EEE-ECCCSSSSSCCEEEEEEESSCEEEEE-EESSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCHHHHHHHHHHHcCCCC-eeE-EeeCCCCCCceEEEEEEECCEEEEEe-ecCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35799999999999999976 999 668999999 7999999999999887 5999999999999999999987543
No 30
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.67 E-value=6.3e-17 Score=136.01 Aligned_cols=73 Identities=19% Similarity=0.194 Sum_probs=66.5
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECC-EEeecCCccccchHHHHHHHHHHHHHHHhccc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDG-VTYTSPNTFSHRKAAEQDVAKIALECISKKIK 145 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G-~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~ 145 (420)
..|||+.||||||++ +..|.|++..+||+|+++|+|+|+|+| ..++.| .|+|||+|||+||+.||+.|.....
T Consensus 5 ~~d~Kt~LqE~~Qk~-~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~~~~ 78 (99)
T 1whq_A 5 SSGIKNFLYAWCGKR-KMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMG-NSTNKKDAQSNAARDFVNYLVRINE 78 (99)
T ss_dssp CCSSHHHHHHHHHHT-TCCCEEEEEEEECSSSEEEEEEEECTTCSCCEEE-EESSHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHC-CCCCeEEEeeecCCCCCeEEEEEEECCeEEEEEe-ccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 479999999999999 888999995589999999999999999 688887 5999999999999999999987554
No 31
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l3c_A
Probab=99.66 E-value=2e-16 Score=125.21 Aligned_cols=67 Identities=25% Similarity=0.308 Sum_probs=60.9
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
..|||+.||||||+ +..|.|+++.+ |+|+++|+|+|.|+|..+ .|.|+|||+|||+||+.||..|..
T Consensus 3 ~~d~Ks~Lqe~~q~--~~~p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~ 71 (73)
T 2b7t_A 3 PVLPKNALMQLNEI--KPGLQYMLLSQTGPVHAPLFVMSVEVNGQVF-EGSGPTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSSSHHHHHHHHHH--CSCCEEEEEEEECSSSSCEEEEEEESSSSEE-EEEESSHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcC--CCCceEEEEEeeCCCCCCeEEEEEEECCEEE-EeecCCHHHHHHHHHHHHHHHHhc
Confidence 35899999999996 67899999764 799999999999999887 899999999999999999999864
No 32
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=99.66 E-value=1.3e-16 Score=134.00 Aligned_cols=70 Identities=23% Similarity=0.203 Sum_probs=63.7
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECC-EEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNG-VTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~G-k~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||||++ +..|.|++... ++|.++|+|.|.|+| +.++.|.|+|||+|||+||+.||..|...
T Consensus 5 ~~d~Kt~LqE~~Qk~-~~~P~Y~~~~~Gp~H~~~F~~~V~v~g~~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 76 (99)
T 1whq_A 5 SSGIKNFLYAWCGKR-KMTPAYEIRAVGNKNRQKFMCEVRVEGFNYAGMGNSTNKKDAQSNAARDFVNYLVRI 76 (99)
T ss_dssp CCSSHHHHHHHHHHT-TCCCEEEEEEEECSSSEEEEEEEECTTCSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHC-CCCCeEEEeeecCCCCCeEEEEEEECCeEEEEEeccCCHHHHHHHHHHHHHHHHHhh
Confidence 459999999999999 88899999434 789999999999999 78999999999999999999999999754
No 33
>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.66 E-value=2.8e-16 Score=129.24 Aligned_cols=71 Identities=28% Similarity=0.404 Sum_probs=64.1
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCC-eEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhcC
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLP-VFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTSG 228 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~-~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s~ 228 (420)
..|||+.||||||++++.+ .|+ ... |+|++ +|+|.|.|+|+.++.|.|+|||+|||.||+.||..|....+
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~-~Y~-~~~Gp~H~~~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~~~ 77 (88)
T 1x48_A 5 SSGYIGLVNSFAQKKKLSV-NYE-QCEPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKLLKSPP 77 (88)
T ss_dssp SSCHHHHHHHHHHHTTCCE-EEE-ECCCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHcCCCC-eeE-EeeCCCCCCceEEEEEEECCEEEEEeecCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3589999999999999986 999 444 79999 79999999999999999999999999999999999987643
No 34
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.65 E-value=5.1e-16 Score=130.12 Aligned_cols=72 Identities=28% Similarity=0.330 Sum_probs=65.3
Q ss_pred CCCCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 154 QDTVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 154 e~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
.+..|||+.||||||++++..|.|+++.+ ++. +.|+|.|.|+|+.++.|.|+|||+|||+||+.||..|...
T Consensus 13 ~~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~-~~F~~~V~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 85 (98)
T 1x47_A 13 PNGKSEVCILHEYMQRVLKVRPVYNFFECENPS-EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 85 (98)
T ss_dssp TTCCCHHHHHHHHHHHHTCSCCEEEEEECSSSS-CCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHCSS
T ss_pred CCCCCHHHHHHHHHHHcCCCCCeEEEEEeECCC-CcEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHhh
Confidence 35679999999999999999999999875 434 9999999999999999999999999999999999999743
No 35
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.64 E-value=5.4e-16 Score=129.95 Aligned_cols=73 Identities=34% Similarity=0.347 Sum_probs=66.6
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhccc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIK 145 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~ 145 (420)
..+|||+.||||||++++.+|.|+++. +||+ +.|++.|+|+|..|+.| .|+|||+|||+||+.||..|.....
T Consensus 14 ~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~~~Gp~--~~F~~~V~v~g~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~~~~ 87 (98)
T 1x47_A 14 NGKSEVCILHEYMQRVLKVRPVYNFFECENPS--EPFGASVTIDGVTYGSG-TASSKKLAKNKAARATLEILIPDFV 87 (98)
T ss_dssp TCCCHHHHHHHHHHHHTCSCCEEEEEECSSSS--CCEEEEEEETTEEEEEE-EESSHHHHHHHHHHHHHHHHCSSSS
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEEeECCC--CcEEEEEEECCEEEEEe-eeCCHHHHHHHHHHHHHHHHHhhhh
Confidence 468999999999999999999999987 7987 99999999999999887 5999999999999999999975443
No 36
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.63 E-value=1e-16 Score=134.03 Aligned_cols=70 Identities=14% Similarity=-0.021 Sum_probs=63.9
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCE-EeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGV-TYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~-~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
..|||+.||||+|+++ ..|.|+++.+||+|++.|++.|+|+|. .++.| .|+|||+|||+||+.||+.|..
T Consensus 5 ~~D~KT~LQE~~Q~~~-~~p~Y~v~~~GpdH~k~F~v~v~i~~~~~~g~G-~G~SKK~AEQ~AA~~AL~~l~~ 75 (94)
T 1t4n_A 5 DMNAKRQLYSLIGYAS-LRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTG-VGRNIKIAGIRAAENALRDKKM 75 (94)
T ss_dssp CHHHHHHHHHHTCSSS-SCCEEEECCCCSSSCCSEEEEEECSSSCEEEEE-EESSHHHHHHHHHHHHHHCHHH
T ss_pred CCCchHHHHHHHcCCC-CCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEE-EeCCHHHHHHHHHHHHHHHHHH
Confidence 4699999999999975 589999988999999999999999998 88887 5999999999999999987764
No 37
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.63 E-value=4.9e-16 Score=136.37 Aligned_cols=69 Identities=29% Similarity=0.291 Sum_probs=65.8
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeecCCCCCeEEEEEEECCEEeeeeee-cCHHHHHHHHHHHHHHHHHh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQSEALLPVFVSSLVFNGVTYTGEPG-RSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~p~H~~~F~~~V~I~Gk~~~~G~G-~SKK~AKq~AA~~AL~~L~~ 225 (420)
..|||+.||||||++++.+|.|+++.+ +|++.|+|.|.|+|+.|+.|.| +|||+|||+||+.||..|..
T Consensus 25 ~~d~Kt~LQE~~Qk~~~~~P~Y~~v~~-~H~~~F~v~V~v~g~~~g~G~G~~SKK~AEQ~AA~~AL~~L~~ 94 (128)
T 1whn_A 25 QITPKMCLLEWCRREKLPQPVYETVQR-TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVCLRSQGL 94 (128)
T ss_dssp TCCHHHHHHHHHHHTTCCCCCCCEEEC-SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHcCCCCCeEEEEee-cCCCcEEEEEEECCEEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 469999999999999999999999988 9999999999999999999999 99999999999999999963
No 38
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.63 E-value=4.1e-16 Score=130.36 Aligned_cols=70 Identities=31% Similarity=0.360 Sum_probs=63.8
Q ss_pred CCCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 69 PEHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 69 ~~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
...+|||+.||||||++ .+|.|+++. +||+|++.|++.|+|+|..+ .| .|+|||+|||+||+.||+.|..
T Consensus 13 ~~~~d~Kt~LqE~~Q~~--~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G-~G~SKK~Aeq~AA~~aL~~L~~ 83 (97)
T 2dmy_A 13 SKAIDLMNALMRLNQIR--PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EA-SGPSKKTAKLHVAVKVLQAMGY 83 (97)
T ss_dssp CCSSSCTHHHHHHHHHS--CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EE-EESSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHhcC--CCceEEEEEeeCCCCCCeEEEEEEECCEEE-EE-eeCCHHHHHHHHHHHHHHHhCC
Confidence 34589999999999996 679999987 89999999999999999988 66 6999999999999999999964
No 39
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.63 E-value=5.5e-16 Score=133.11 Aligned_cols=75 Identities=21% Similarity=0.148 Sum_probs=67.1
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEE-----CCEEeecCCccccchHHHHHHHHHHHHHHHhccc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSV-----DGVTYTSPNTFSHRKAAEQDVAKIALECISKKIK 145 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V-----~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~ 145 (420)
..|||+.||||||++++ .|.|++..+||+|++.|++.|+| +|..++.| .|+|||+|||+||+.||+.|....-
T Consensus 25 ~~d~Kt~LqE~~Qk~~~-~p~Y~~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G-~G~SKK~AEq~AA~~AL~~L~~~~~ 102 (113)
T 1uil_A 25 LENAKARLNQYFQKEKI-QGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFARE-HGSNKKLAAQSCALSLVRQLYHLGV 102 (113)
T ss_dssp HHHHHHHHHHHHHHSCC-CCCCEEEEESCSTTCEEEEEEEEEETTTTEEEEEEC-CCSSHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCCHHHHHHHHHHHCCC-CCeEEEeeECCCCCCcEEEEEEEeeeccCCEEEEEE-eeCCHHHHHHHHHHHHHHHHHhcCC
Confidence 46999999999999999 89999655899999999999999 68888887 5999999999999999999987654
Q ss_pred CC
Q 014689 146 DE 147 (420)
Q Consensus 146 ~E 147 (420)
.+
T Consensus 103 ie 104 (113)
T 1uil_A 103 IE 104 (113)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 40
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.63 E-value=1.1e-15 Score=127.73 Aligned_cols=70 Identities=23% Similarity=0.232 Sum_probs=63.0
Q ss_pred CCCCCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 153 NQDTVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 153 ~e~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
+....|||+.||||||++ ..|.|+++.+ ++|++.|++.|.|+|+.+ .|.|+|||+|||+||+.||..|..
T Consensus 12 ~~~~~d~Kt~LqE~~Q~~--~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~aL~~L~~ 83 (97)
T 2dmy_A 12 DSKAIDLMNALMRLNQIR--PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMGY 83 (97)
T ss_dssp CCCSSSCTHHHHHHHHHS--CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHhcC--CCceEEEEEeeCCCCCCeEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHhCC
Confidence 344579999999999996 6789999864 799999999999999988 899999999999999999999964
No 41
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=99.62 E-value=8.3e-16 Score=132.00 Aligned_cols=69 Identities=23% Similarity=0.267 Sum_probs=62.5
Q ss_pred CChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEE-----CCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 157 VFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVF-----NGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 157 ~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I-----~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
.|||+.||||||++++ .|.|++... |+|++.|+|.|.| +|+.++.|.|+|||+|||.||+.||..|...
T Consensus 26 ~d~Kt~LqE~~Qk~~~-~p~Y~~~~~Gp~H~~~F~~~V~v~~~~~~~~~~~~G~G~SKK~AEq~AA~~AL~~L~~~ 100 (113)
T 1uil_A 26 ENAKARLNQYFQKEKI-QGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHL 100 (113)
T ss_dssp HHHHHHHHHHHHHSCC-CCCCEEEEESCSTTCEEEEEEEEEETTTTEEEEEECCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCC-CCeEEEeeECCCCCCcEEEEEEEeeeccCCEEEEEEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 3899999999999999 899995444 7999999999999 6888999999999999999999999999754
No 42
>1t4n_A Ribonuclease III; DSRBD, RNA-binding, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.50.1.1
Probab=99.62 E-value=3.2e-16 Score=131.01 Aligned_cols=70 Identities=19% Similarity=0.052 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCE-EeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGV-TYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk-~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||+|+++ ..|.|+++.+ |+|++.|++.|.|+|. .+++|.|+|||+|||.||+.||..|.-.
T Consensus 5 ~~D~KT~LQE~~Q~~~-~~p~Y~v~~~GpdH~k~F~v~v~i~~~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~l 76 (94)
T 1t4n_A 5 DMNAKRQLYSLIGYAS-LRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKML 76 (94)
T ss_dssp CHHHHHHHHHHTCSSS-SCCEEEECCCCSSSCCSEEEEEECSSSCEEEEEEESSHHHHHHHHHHHHHHCHHHH
T ss_pred CCCchHHHHHHHcCCC-CCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999974 5799999776 7999999999999998 8999999999999999999999987543
No 43
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.62 E-value=3.3e-16 Score=135.56 Aligned_cols=73 Identities=14% Similarity=-0.059 Sum_probs=65.5
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCE-EeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGV-TYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~-~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
...|||+.||||||+.+ .+|.|.++.+||+|++.|++.|+|+|. .++.| .|+|||+|||+||+.||..+....
T Consensus 6 ~~~D~KT~LQE~~Q~~~-~~P~Y~vv~~GPdH~k~F~v~V~i~g~~~~g~G-~G~SKK~AEQ~AA~~AL~~l~~l~ 79 (117)
T 1t4o_A 6 LDMNAKRQLYSLIGYAS-LRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTG-VGRNIKIAGIRAAENALRDKKMLD 79 (117)
T ss_dssp CCTTHHHHHHHHHCCGG-GCCEEEEEECCCSSCCCEEEEEECTTCCEEEEE-EESSHHHHHHHHHHHHHHCHHHHH
T ss_pred CCCCchHHHHHHHcCCC-CCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEE-EeCCHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999954 689999988899999999999999998 88887 599999999999999998876544
No 44
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=99.61 E-value=9.6e-16 Score=134.50 Aligned_cols=74 Identities=27% Similarity=0.367 Sum_probs=67.4
Q ss_pred CCCCCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCEEeecCCcc-ccchHHHHHHHHHHHHHHHhcc
Q 014689 68 VPEHLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTF-SHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 68 l~~~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~~~~~Gg~G-sSKKeAEq~AAk~AL~~L~~~~ 144 (420)
.....|||+.||||||++++.+|.|+++.+ +|++.|++.|+|+|..|+.| .| +|||+|||+||+.||+.|....
T Consensus 22 ~~~~~d~Kt~LQE~~Qk~~~~~P~Y~~v~~--~H~~~F~v~V~v~g~~~g~G-~G~~SKK~AEQ~AA~~AL~~L~~~~ 96 (128)
T 1whn_A 22 YPPQITPKMCLLEWCRREKLPQPVYETVQR--TIDRMFCSVVTVAEQKYQST-LWDKSKKLAEQTAAIVCLRSQGLPE 96 (128)
T ss_dssp SCTTCCHHHHHHHHHHHTTCCCCCCCEEEC--SSSCCEEEEEEETTEEEEES-SCBSSHHHHHHHHHHHHHHHHTCSS
T ss_pred cccCCCHHHHHHHHHHHcCCCCCeEEEEee--cCCCcEEEEEEECCEEEEEE-eccCCHHHHHHHHHHHHHHHHhccc
Confidence 345689999999999999999999999887 89999999999999999887 59 9999999999999999997543
No 45
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.61 E-value=1.3e-15 Score=126.43 Aligned_cols=69 Identities=23% Similarity=0.214 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
..++|+.||||||+++ .|.|+++.+ |+|+++|+|+|.|+|+.+ .|.|+|||+|||+||+.||..|....
T Consensus 13 ~~~~K~~LqEl~Qk~~--~p~Y~~v~~~Gp~H~~~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~~ 83 (91)
T 2l33_A 13 TKHGKNPVMELNEKRR--GLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPDT 83 (91)
T ss_dssp CSSTTCHHHHHHHHCS--SCEEEEEEEEECSSCEEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCCHHHHHHHhCC--CCeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHhhcC
Confidence 3589999999999998 789999765 899999999999999887 89999999999999999999997554
No 46
>2l33_A Interleukin enhancer-binding factor 3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, DRBM; NMR {Homo sapiens}
Probab=99.60 E-value=6.9e-16 Score=128.09 Aligned_cols=69 Identities=26% Similarity=0.245 Sum_probs=62.9
Q ss_pred CChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 72 LMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 72 ~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
.++|+.||||||+++ .|.|+++. +||+|+++|+++|.|+|..+ .| .|+|||+|||+||+.||+.|....
T Consensus 14 ~~~K~~LqEl~Qk~~--~p~Y~~v~~~Gp~H~~~F~v~V~v~g~~~-~G-~G~SKK~AEq~AA~~AL~~L~~~~ 83 (91)
T 2l33_A 14 KHGKNPVMELNEKRR--GLKYELISETGGSHDKRFVMEVEVDGQKF-QG-AGSNKKVAKAYAALAALEKLFPDT 83 (91)
T ss_dssp SSTTCHHHHHHHHCS--SCEEEEEEEEECSSCEEEEEEEEETTEEE-EE-EESSHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCCCHHHHHHHhCC--CCeEEEEEeeCCCCCCeEEEEEEECCEEE-Ee-eeCCHHHHHHHHHHHHHHHHhhcC
Confidence 589999999999998 78999877 89999999999999999887 66 699999999999999999997543
No 47
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.58 E-value=2e-15 Score=130.12 Aligned_cols=71 Identities=28% Similarity=0.334 Sum_probs=63.2
Q ss_pred CCCCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhccc
Q 014689 68 VPEHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIK 145 (420)
Q Consensus 68 l~~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~ 145 (420)
....+|||+.||||||+ |.|+++. +||+|+++|+++|+|+|..| .| .|+|||+|||+||+.||+.|.....
T Consensus 33 ~~~~kd~Ks~LQE~~q~-----p~Y~~v~~~Gp~H~k~F~v~V~v~g~~~-~G-~G~SKK~AEq~AA~~AL~~L~~~~~ 104 (114)
T 2ljh_A 33 IPQPKNTVAMLNELRHG-----LIYKLESQTGPVHAPLFTISVEVDGQKY-LG-QGRSKKVARIEAAATALRSFIQFKD 104 (114)
T ss_dssp CCCCSCHHHHHHHHCSC-----CEEEEEEEECCSSSCEEEEEEEETTEEE-EE-EESSHHHHHHHHHHHHHHHHCCCTT
T ss_pred CCCCCCHHHHHHHHccC-----CeEEEEEeeCCCCCCeEEEEEEECCEEE-Ee-eeCCHHHHHHHHHHHHHHHHHcCCC
Confidence 34568999999999984 8999977 89999999999999999999 66 6999999999999999999986543
No 48
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=99.57 E-value=2.3e-15 Score=130.25 Aligned_cols=69 Identities=19% Similarity=0.059 Sum_probs=62.8
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCE-EeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGV-TYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk-~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
..|||+.||||||+.+ ..|.|.++.+ |+|++.|++.|.|+|. .++.|.|+|||+|||.||+.||..|.-
T Consensus 7 ~~D~KT~LQE~~Q~~~-~~P~Y~vv~~GPdH~k~F~v~V~i~g~~~~g~G~G~SKK~AEQ~AA~~AL~~l~~ 77 (117)
T 1t4o_A 7 DMNAKRQLYSLIGYAS-LRLHYVTVKKPTAVDPNSIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKM 77 (117)
T ss_dssp CTTHHHHHHHHHCCGG-GCCEEEEEECCCSSCCCEEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHH
T ss_pred CCCchHHHHHHHcCCC-CCCEEEEeeeCCCCCCeEEEEEEECCEEEEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4699999999999954 6799999877 7999999999999998 899999999999999999999987754
No 49
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.55 E-value=9.2e-15 Score=114.94 Aligned_cols=66 Identities=27% Similarity=0.222 Sum_probs=59.4
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
.+||++.||||| ..|.|+++. +||+|++.|+++|.|+|..+ .| .|+|||+|||+||+.||+.|...
T Consensus 3 ~knp~s~L~E~~-----~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G-~G~SKK~Aeq~AA~~al~~L~~~ 69 (71)
T 2b7v_A 3 GKNPVMILNELR-----PGLKYDFLSESGESHAKSFVMSVVVDGQFF-EG-SGRNKKLAKARAAQSALATVFNL 69 (71)
T ss_dssp SSCHHHHHHHHC-----CSCEEEEEECCCCTTTCCEEEEEECSSCEE-EE-EESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhC-----CCCEEEEEEeECCCCCceEEEEEEECCEEE-EE-eeCCHHHHHHHHHHHHHHHHHhc
Confidence 589999999994 578999877 89999999999999999876 65 69999999999999999998753
No 50
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing, hydrolase; NMR {Drosophila melanogaster}
Probab=99.54 E-value=9.4e-15 Score=125.97 Aligned_cols=66 Identities=27% Similarity=0.330 Sum_probs=60.0
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
..|||+.||||||+ |.|+++.+ ++|+++|+|+|.|+|+.+ .|.|+|||+|||+||+.||..|....
T Consensus 36 ~kd~Ks~LQE~~q~-----p~Y~~v~~~Gp~H~k~F~v~V~v~g~~~-~G~G~SKK~AEq~AA~~AL~~L~~~~ 103 (114)
T 2ljh_A 36 PKNTVAMLNELRHG-----LIYKLESQTGPVHAPLFTISVEVDGQKY-LGQGRSKKVARIEAAATALRSFIQFK 103 (114)
T ss_dssp CSCHHHHHHHHCSC-----CEEEEEEEECCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCCCT
T ss_pred CCCHHHHHHHHccC-----CeEEEEEeeCCCCCCeEEEEEEECCEEE-EeeeCCHHHHHHHHHHHHHHHHHcCC
Confidence 46999999999984 89999765 799999999999999999 99999999999999999999997543
No 51
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=99.53 E-value=2.9e-14 Score=112.08 Aligned_cols=65 Identities=29% Similarity=0.291 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|+++.||||| ..|.|+++.+ ++|++.|+|+|.|+|+.+ .|.|+|||+|||.||+.||..|...
T Consensus 3 ~knp~s~L~E~~-----~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G~G~SKK~Aeq~AA~~al~~L~~~ 69 (71)
T 2b7v_A 3 GKNPVMILNELR-----PGLKYDFLSESGESHAKSFVMSVVVDGQFF-EGSGRNKKLAKARAAQSALATVFNL 69 (71)
T ss_dssp SSCHHHHHHHHC-----CSCEEEEEECCCCTTTCCEEEEEECSSCEE-EEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhC-----CCCEEEEEEeECCCCCceEEEEEEECCEEE-EEeeCCHHHHHHHHHHHHHHHHHhc
Confidence 468999999994 6789998765 799999999999999876 8999999999999999999999753
No 52
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure, transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Probab=99.52 E-value=1.2e-14 Score=132.68 Aligned_cols=69 Identities=25% Similarity=0.301 Sum_probs=64.3
Q ss_pred CChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 157 VFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 157 ~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
.|||+.||||||++++. |.|+++.+ |+|.+.|+|.|.|+|+.++.|.|+|||+|||+||+.||..|...
T Consensus 13 ~n~ks~LqE~~q~~~~~-p~Y~~~~~~Gp~h~~~F~~~v~v~g~~~~~G~G~sKK~Aeq~AA~~al~~L~~~ 83 (179)
T 1qu6_A 13 GFFMEELNTYRQKQGVV-LKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKE 83 (179)
T ss_dssp CSHHHHHHHHHHHHTCC-CEEEEEESCBTTTBCCEEEEEESSSSCCCEEECCSSHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHhCCCC-CeEEEeeccCCCCCCeEEEEEEECCEEEEecCCCCHHHHHHHHHHHHHHHHhcc
Confidence 58999999999999997 89999765 79999999999999988999999999999999999999999754
No 53
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.45 E-value=2.1e-13 Score=108.70 Aligned_cols=66 Identities=23% Similarity=0.220 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 159 CKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 159 ~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
.|+.|++|+|.+ ..|.|+++.+ ++|+++|++.|.|+|+.+ .|.|+|||+|||+||+.||..|..+.
T Consensus 6 ~K~pl~~L~q~~--~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G~G~SKK~Aeq~AA~~al~~L~~~~ 73 (75)
T 3p1x_A 6 GKNPVMELNEKR--RGLKYELISETGGSHDKRFVMEVEVDGQKF-QGAGSNKKVAKAYAALAALEKLFPDT 73 (75)
T ss_dssp CCCHHHHHHHHS--TTCCEEEEEEESCTTSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHcC--CCCEEEEEEeeCCCCCceEEEEEEECCEEE-EEEECCHHHHHHHHHHHHHHHHHccC
Confidence 344555555554 4689999865 799999999999999988 89999999999999999999997664
No 54
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.90A {Homo sapiens}
Probab=99.44 E-value=1.1e-13 Score=110.35 Aligned_cols=67 Identities=25% Similarity=0.206 Sum_probs=56.5
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
.+|+++.|+|+ + ..|.|+++. +||+|++.|++.|.|+|..+ .| .|+|||+|||+||+.||+.|....
T Consensus 6 ~K~pl~~L~q~---~--~~p~Y~~~~~~Gp~H~~~F~~~v~v~g~~~-~G-~G~SKK~Aeq~AA~~al~~L~~~~ 73 (75)
T 3p1x_A 6 GKNPVMELNEK---R--RGLKYELISETGGSHDKRFVMEVEVDGQKF-QG-AGSNKKVAKAYAALAALEKLFPDT 73 (75)
T ss_dssp CCCHHHHHHHH---S--TTCCEEEEEEESCTTSCEEEEEEEETTEEE-EE-EESSHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCHHHHHHHc---C--CCCEEEEEEeeCCCCCceEEEEEEECCEEE-EE-EECCHHHHHHHHHHHHHHHHHccC
Confidence 45665555555 3 478999987 89999999999999999988 66 699999999999999999997643
No 55
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.44 E-value=1.1e-13 Score=129.52 Aligned_cols=70 Identities=26% Similarity=0.222 Sum_probs=65.1
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
..|||+.||||||++++..|.|+++. +||+|.+.|+|.|+|+|. ++.| .|+|||+||++||+.||+.|..
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~~~~~G~~h~~~F~v~v~v~~~-~~~G-~G~skK~Ae~~AA~~AL~~L~~ 219 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLG-EGKSKKEAEQRAAEELIKLLEE 219 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEE-EESSHHHHHHHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEEeeCCCCCceEEEEEEECCE-EEEE-ecCCHHHHHHHHHHHHHHHhhc
Confidence 47999999999999999999999877 899999999999999999 9887 5999999999999999999863
No 56
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.43 E-value=1.7e-13 Score=131.11 Aligned_cols=73 Identities=29% Similarity=0.239 Sum_probs=66.5
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
...|||+.||||||++++..|.|+++. +||+|++.|+|.|+|+|..++.| .|+|||+||++||+.||+.|..+
T Consensus 177 ~~~dpkt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~~ 250 (252)
T 1o0w_A 177 MLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATG-KGRTKKEAEKEAARIAYEKLLKE 250 (252)
T ss_dssp CCSCHHHHHHHHHHHHHSSCCEEEEEEEECCTTSCEEEEEEEETTEEEEEE-EESSHHHHHHHHHHHHHHHHC--
T ss_pred cccCHHHHHHHHHHHcCCCCceEEEEeeeCCCCCCeEEEEEEECCEEEEEE-eeCCHHHHHHHHHHHHHHHHhhc
Confidence 357999999999999999999999987 89999999999999999999887 59999999999999999998653
No 57
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein; 2.60A {Homo sapiens}
Probab=99.43 E-value=4.3e-13 Score=127.60 Aligned_cols=71 Identities=28% Similarity=0.335 Sum_probs=64.9
Q ss_pred CCCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 155 DTVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 155 ~~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
...|||+.||||||++++..|.|+++.. ++. +.|+|.|.|+|..|+.|.|+|||+||++||+.||..|...
T Consensus 20 ~~kd~ks~LqE~~q~~~~~~p~Y~~~~~~Gp~-~~F~~~v~v~g~~~~~G~G~SKK~Aeq~AA~~aL~~L~~~ 91 (232)
T 2yt4_A 20 NGKSEVCILHEYMQRVLKVRPVYNFFECENPS-EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEILIPD 91 (232)
T ss_dssp TTSCHHHHHHHHHHHTTCCCCEEEEEECSCTT-SCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHSTT
T ss_pred CCCCHHHHHHHHHHHcCCCCCeEEEEeeECCC-CcEEEEEEECCEEEeecCCCCHHHHHHHHHHHHHHHHHhh
Confidence 4569999999999999999999999875 444 9999999999999999999999999999999999999764
No 58
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference, endonucleolytic cleavage, hydrolase/RNA complex; 1.70A {Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A 2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A 1jfz_A 1rc5_A
Probab=99.42 E-value=2.2e-13 Score=127.59 Aligned_cols=68 Identities=32% Similarity=0.265 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHH
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLL 224 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~ 224 (420)
..|||+.||||||++++..|.|+++.+ ++|.+.|+|.|.|+|+ ++.|.|+|||+||+.||+.||..|.
T Consensus 149 ~~~pks~LqE~~q~~~~~~p~Y~~~~~~G~~h~~~F~v~v~v~~~-~~~G~G~skK~Ae~~AA~~AL~~L~ 218 (221)
T 2nug_A 149 KKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEY-RTLGEGKSKKEAEQRAAEELIKLLE 218 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCCEEEEEEEESCGGGCEEEEEEEETTE-EEEEEESSHHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEEeeCCCCCceEEEEEEECCE-EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 469999999999999999999998765 7899999999999999 9999999999999999999999986
No 59
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.00A {Thermotoga maritima} SCOP: a.149.1.1 d.50.1.1
Probab=99.42 E-value=3e-13 Score=129.38 Aligned_cols=71 Identities=31% Similarity=0.315 Sum_probs=64.9
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..|||+.||||||++++..|.|+++.+ ++|.+.|+|.|.|+|+.++.|.|+|||+|||.||+.||..|...
T Consensus 178 ~~dpkt~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~~ 250 (252)
T 1o0w_A 178 LFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKLLKE 250 (252)
T ss_dssp CSCHHHHHHHHHHHHHSSCCEEEEEEEECCTTSCEEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHHC--
T ss_pred ccCHHHHHHHHHHHcCCCCceEEEEeeeCCCCCCeEEEEEEECCEEEEEEeeCCHHHHHHHHHHHHHHHHhhc
Confidence 469999999999999999999999764 78999999999999999999999999999999999999999643
No 60
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.35 E-value=7.1e-14 Score=133.94 Aligned_cols=72 Identities=29% Similarity=0.288 Sum_probs=0.0
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHh
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISK 142 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~ 142 (420)
..+|||+.||||||++++.+|.|+++. +||+|++.|+|.|+|+|..++.| .|+|||+||++||+.||+.|..
T Consensus 175 ~~~dpks~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G-~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 175 LIKDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARA-IAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cccCHHHHHHHHHHHcCCCCCceEEeeccCCCCCceEEEEEEECCEEEEEe-eeCCHHHHHHHHHHHHHHHHHc
Confidence 458999999999999999999999987 89999999999999999999887 5999999999999999998864
No 61
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.33 E-value=1e-13 Score=131.57 Aligned_cols=73 Identities=30% Similarity=0.303 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 71 HLMHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
..|||+.||||||++++..|.|++..+||+|.+.|+|.|+|+|..++.| .|+|||+||++||+.||+.|....
T Consensus 161 ~~dpkt~Lqe~~q~~~~~~p~Y~~~~~Gp~h~~~F~v~v~v~g~~~~~G-~G~skk~Ae~~AA~~AL~~L~~~~ 233 (242)
T 2a11_A 161 GLDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAVVVVMDSEYGSG-VGRSKKEAEQKAAAAAWKALEVLD 233 (242)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cCChHHHHHHHHHHhCCCCCeEEEeccCCCCCCeEEEEEEECCEEEEEe-eeCCHHHHHHHHHHHHHHHHhhcc
Confidence 5799999999999999999999998899999999999999999988887 599999999999999999997654
No 62
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862, csgid, structura genomics; 2.21A {Campylobacter jejuni subsp}
Probab=99.30 E-value=2.3e-13 Score=130.37 Aligned_cols=70 Identities=27% Similarity=0.283 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec--CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHh
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS--EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLV 225 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~--p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~ 225 (420)
..|||+.||||||++++..|.|+++.+ ++|.+.|+|.|.|+|+.++.|.|+|||+|||.||+.||+.|..
T Consensus 176 ~~dpks~LqE~~q~~~~~~p~Y~~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 247 (248)
T 3n3w_A 176 IKDYKTKLQEITQGKIGQTPQYETVRAFGPDHLKQFEIALMLDGKELARAIAGSKKEAQQMAAKIALEKLGA 247 (248)
T ss_dssp ------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEeeccCCCCCceEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHHc
Confidence 469999999999999999999999765 7899999999999999999999999999999999999998864
No 63
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=99.27 E-value=4e-13 Score=127.45 Aligned_cols=72 Identities=32% Similarity=0.334 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHcCCCCCcEEEeec-CCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 156 TVFCKSILNEFAVKMNLELPAYSTRQS-EALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~lP~Y~~~~~-p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
..|||+.||||||++++..|.|++... ++|.+.|+|.|.|+|+.++.|.|+|||+||+.||+.||..|....
T Consensus 161 ~~dpkt~Lqe~~q~~~~~~p~Y~~~~~Gp~h~~~F~v~v~v~g~~~~~G~G~skk~Ae~~AA~~AL~~L~~~~ 233 (242)
T 2a11_A 161 GLDWKTSLQELTAARGLGAPSYLVTSTGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVLD 233 (242)
T ss_dssp -------------------------------------------------------------------------
T ss_pred cCChHHHHHHHHHHhCCCCCeEEEeccCCCCCCeEEEEEEECCEEEEEeeeCCHHHHHHHHHHHHHHHHhhcc
Confidence 468999999999999999999998776 789999999999999989999999999999999999999997553
No 64
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition, DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Probab=99.23 E-value=1.5e-11 Score=117.05 Aligned_cols=68 Identities=26% Similarity=0.197 Sum_probs=60.6
Q ss_pred CCCChHHHHHHHHHHcCCCCCeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 70 EHLMHKNRLQEHAQRSGIPLPVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 70 ~~~npKS~LQE~cQK~g~~lP~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
...|||+.|||| +..|.|+++. +||+|++.|+++|+|+|..+ .| .|+|||+|||+||+.||+.|....
T Consensus 159 ~~~d~ks~LqE~-----~~~p~Y~~~~~~Gp~h~~~F~~~v~v~~~~~-~G-~G~sKK~Aeq~AA~~al~~L~~~~ 227 (236)
T 2l3j_A 159 SGKNPVMILNEL-----RPGLKYDFLSESGESHAKSFVMSVVVDGQFF-EG-SGRNKKLAKARAAQSALATVFNLH 227 (236)
T ss_dssp SSCCHHHHHHHH-----CCCEEEEEECCSSSSSSCCEEEEEEETTEEE-EE-EESSHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHhc-----CCCCcEEEEEeeCCCCCCeEEEEEEECCEEE-Ee-eeCCHHHHHHHHHHHHHHHHcccc
Confidence 457999999999 4678999877 89999999999999999986 66 699999999999999999997543
No 65
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.89 E-value=1.6e-10 Score=115.82 Aligned_cols=68 Identities=21% Similarity=0.110 Sum_probs=0.0
Q ss_pred CCChHHHHHHHHHHcCCCC-CeEEEec-cCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcc
Q 014689 71 HLMHKNRLQEHAQRSGIPL-PVYQSHN-EGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKI 144 (420)
Q Consensus 71 ~~npKS~LQE~cQK~g~~l-P~Yev~~-eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~ 144 (420)
..|||+.||||||++++.. |.|++.. +|| |++.|+|+|..++.| .|+|||+|||.||+.||+.|....
T Consensus 253 ~~d~Kt~LqE~~Q~~~~~~~~~Y~~~~~~Gp-----F~v~v~i~~~~~g~G-~G~SKK~AEq~AA~~AL~~L~~~~ 322 (341)
T 3rv0_A 253 NKNAKNELAELLQINKLGHKLHYRKLTEMPP-----FRVEVKIGDILLDEA-EGNSIREAEHRAAMKVLENDELLR 322 (341)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEEEeccCC-----EEEEEEECCEEEEEE-EeCCHHHHHHHHHHHHHHHhhhhh
Confidence 4799999999999998765 5999877 565 999999999999987 599999999999999999987654
No 66
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A {Vanderwaltozyma polyspora}
Probab=98.88 E-value=1.9e-10 Score=115.37 Aligned_cols=69 Identities=22% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCChhHHHHHHHHHcCCCC-CcEEEeecCCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 156 TVFCKSILNEFAVKMNLEL-PAYSTRQSEALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 156 ~~n~Ks~LqE~cQk~~~~l-P~Y~~~~~p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
..|||+.||||||++++.. |.|+++.+. ..|++.|.|+|+.++.|.|+|||+|||.||+.||..|....
T Consensus 253 ~~d~Kt~LqE~~Q~~~~~~~~~Y~~~~~~---GpF~v~v~i~~~~~g~G~G~SKK~AEq~AA~~AL~~L~~~~ 322 (341)
T 3rv0_A 253 NKNAKNELAELLQINKLGHKLHYRKLTEM---PPFRVEVKIGDILLDEAEGNSIREAEHRAAMKVLENDELLR 322 (341)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccCHHHHHHHHHHHcCCCCCceEEEEecc---CCEEEEEEECCEEEEEEEeCCHHHHHHHHHHHHHHHhhhhh
Confidence 4699999999999998765 599987752 12999999999999999999999999999999999997543
No 67
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.63 E-value=4.3e-08 Score=93.77 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=51.3
Q ss_pred ChhHHHHHHHHHcCCCCCcEEEeecCCCCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 158 FCKSILNEFAVKMNLELPAYSTRQSEALLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 158 n~Ks~LqE~cQk~~~~lP~Y~~~~~p~H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
++|+.|+||+|.... .+.|.... ..|.+.|++.|.|+|+.++.|.|+|||+|||.||+.||..|..+
T Consensus 198 ~~k~~l~el~~~~~~-~~~~~~~~-~~~~~~f~v~v~v~~~~~~~G~G~SkK~Aeq~AA~~AL~~l~~~ 264 (265)
T 3c4b_A 198 VPRSPVRELLEMEPE-TAKFSPAE-RTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKAN 264 (265)
T ss_dssp SCCCHHHHHHHHCTT-TEEECCCE-ECTTSCEEEEEEETTTEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhccC-Cceeeecc-ccCCCcEEEEEEEecceEEEEeeCCHHHHHHHHHHHHHHHHhhC
Confidence 456666666665542 22333222 36889999999999999999999999999999999999999643
No 68
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding, endonuclease, HEL hydrolase, nucleotide-binding, phosphoprotein, RN binding; HET: MSE; 1.68A {Mus musculus} PDB: 3c4t_A 2eb1_A
Probab=98.47 E-value=9.4e-08 Score=91.42 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=50.1
Q ss_pred ChHHHHHHHHHHcCCCCCeEEEeccCCCCCCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 73 MHKNRLQEHAQRSGIPLPVYQSHNEGFQHAPKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 73 npKS~LQE~cQK~g~~lP~Yev~~eGP~H~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
++|+.||||.|.... .+.|.. .++.|++.|++.|+|+|..++.| .|+|||+|||+||+.||+.|...
T Consensus 198 ~~k~~l~el~~~~~~-~~~~~~--~~~~~~~~f~v~v~v~~~~~~~G-~G~SkK~Aeq~AA~~AL~~l~~~ 264 (265)
T 3c4b_A 198 VPRSPVRELLEMEPE-TAKFSP--AERTYDGKVRVTVEVVGKGKFKG-VGRSYRIAKSAAARRALRSLKAN 264 (265)
T ss_dssp SCCCHHHHHHHHCTT-TEEECC--CEECTTSCEEEEEEETTTEEEEE-EESSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhccC-Cceeee--ccccCCCcEEEEEEEecceEEEE-eeCCHHHHHHHHHHHHHHHHhhC
Confidence 445555555555432 223322 45578999999999999888887 59999999999999999999753
No 69
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=96.59 E-value=0.0044 Score=51.97 Aligned_cols=70 Identities=9% Similarity=0.093 Sum_probs=51.8
Q ss_pred CChhHHHHHHHHHcC-----CCCCcEEEeecCCCCCeEEEEEEECC----EEeeeeeecCHHHHHHHHHHHHHHHHHhhc
Q 014689 157 VFCKSILNEFAVKMN-----LELPAYSTRQSEALLPVFVSSLVFNG----VTYTGEPGRSKKEAEQLAARAVIRTLLVTS 227 (420)
Q Consensus 157 ~n~Ks~LqE~cQk~~-----~~lP~Y~~~~~p~H~~~F~~~V~I~G----k~~~~G~G~SKK~AKq~AA~~AL~~L~~~s 227 (420)
.+-++.|+.||++.- ...|.|.+.........| |+|.+-. +.+.+....|||.||+.||-+|...|....
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~~~~~~~-c~v~LP~~splr~i~g~~~~sk~~AK~sAAf~Ac~~L~~~G 82 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI-CRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNLG 82 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCGGGCEE-EEEECCTTCSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEeecCCCeE-EEEECCCCCCCCeeeCCccccHHHHHHHHHHHHHHHHHHCC
Confidence 357899999999863 245889876553234567 9998853 223333469999999999999999998765
No 70
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=93.20 E-value=0.11 Score=43.46 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=50.6
Q ss_pred CChHHHHHHHHHHcC-----CCCCeEEEeccCCCCCCeEEEEEEECCE---EeecCCccccchHHHHHHHHHHHHHHHhc
Q 014689 72 LMHKNRLQEHAQRSG-----IPLPVYQSHNEGFQHAPKFRASVSVDGV---TYTSPNTFSHRKAAEQDVAKIALECISKK 143 (420)
Q Consensus 72 ~npKS~LQE~cQK~g-----~~lP~Yev~~eGP~H~p~FtvtV~V~G~---~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~ 143 (420)
.+.++.|+.||++.. ...|.|.+..... ....| |+|.+=.. .-..|..-.+|+.||+.||.+|...|.+.
T Consensus 4 ~sAi~lL~~yC~~Lp~d~~~~~~P~~~~~~~~~-~~~~~-c~v~LP~~splr~i~g~~~~sk~~AK~sAAf~Ac~~L~~~ 81 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDE-FGGTI-CRITLPANAPISEIESSLLPSTEAAKKDACLKAVHELHNL 81 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCG-GGCEE-EEEECCTTCSSCCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccCccceEEEeEeec-CCCeE-EEEECCCCCCCCeeeCCccccHHHHHHHHHHHHHHHHHHC
Confidence 467899999999953 2458898655211 12467 99887431 11112234899999999999999999987
Q ss_pred ccC
Q 014689 144 IKD 146 (420)
Q Consensus 144 ~~~ 146 (420)
+-.
T Consensus 82 G~L 84 (102)
T 2kou_A 82 GVL 84 (102)
T ss_dssp CSC
T ss_pred CCC
Confidence 743
No 71
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=89.46 E-value=0.28 Score=54.97 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=50.0
Q ss_pred CChhHHHHHHHHHcCCCCCcEEEeec--------C-----CCCC-eEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHH
Q 014689 157 VFCKSILNEFAVKMNLELPAYSTRQS--------E-----ALLP-VFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRT 222 (420)
Q Consensus 157 ~n~Ks~LqE~cQk~~~~lP~Y~~~~~--------p-----~H~~-~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~ 222 (420)
..+|.++++ |.|-. ..|.+.+. | ...+ .|.|.+.+-+-.+-+|..+.||+|||.||+.||+.
T Consensus 17 ~~pk~~~~q---~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~~~~~~~kkd~eq~aa~~al~~ 92 (950)
T 3htx_A 17 PTPKAIIHQ---KFGAK-ASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFKKKKDSEQSAAELALDK 92 (950)
T ss_dssp CCCHHHHHH---TTGGG-SEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEECCCBSCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHH---HhCcc-eeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEecchhhccccHHHHHHHHHHHH
Confidence 357777764 44444 48977542 1 2223 79999999876666799999999999999999999
Q ss_pred HHhhc
Q 014689 223 LLVTS 227 (420)
Q Consensus 223 L~~~s 227 (420)
|+.+.
T Consensus 93 ~g~~~ 97 (950)
T 3htx_A 93 LGIRP 97 (950)
T ss_dssp TTSTT
T ss_pred hCCCc
Confidence 98765
No 72
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=82.26 E-value=1.2 Score=50.08 Aligned_cols=68 Identities=21% Similarity=0.310 Sum_probs=48.9
Q ss_pred CChHHHHHHHHHHcCCCCCeEEEec--cC----------CCCC-CeEEEEEEECCEEeecCCccccchHHHHHHHHHHHH
Q 014689 72 LMHKNRLQEHAQRSGIPLPVYQSHN--EG----------FQHA-PKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALE 138 (420)
Q Consensus 72 ~npKS~LQE~cQK~g~~lP~Yev~~--eG----------P~H~-p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~ 138 (420)
..||..++ ||.|.. ..|.+++ ++ |... -.|.|.+.+-+..+.++ ..+.||+|||.||+.||+
T Consensus 17 ~~pk~~~~---q~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~lp~~~~~~~-~~~~kkd~eq~aa~~al~ 91 (950)
T 3htx_A 17 PTPKAIIH---QKFGAK-ASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSN-VFKKKKDSEQSAAELALD 91 (950)
T ss_dssp CCCHHHHH---HTTGGG-SEEEEEEECCSCSCCCTTCCSCCCCCCEEEEEEECSSCEEECC-CBSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHH---HHhCcc-eeeeehhhhcccCCCCCccccCCCCCeeEEEEeeCCCceEecc-hhhccccHHHHHHHHHHH
Confidence 47888765 444433 5887755 11 1222 38999999987766665 589999999999999999
Q ss_pred HHHhcc
Q 014689 139 CISKKI 144 (420)
Q Consensus 139 ~L~~~~ 144 (420)
+|+..+
T Consensus 92 ~~g~~~ 97 (950)
T 3htx_A 92 KLGIRP 97 (950)
T ss_dssp TTTSTT
T ss_pred HhCCCc
Confidence 987653
No 73
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.45 E-value=3.2 Score=35.63 Aligned_cols=74 Identities=18% Similarity=-0.009 Sum_probs=48.6
Q ss_pred CCCCCChHHHHHHHHHHcCCCC--CeEEE-ec-cCCCCCCeEEEEEEEC---CEEeecCCccccchHHHHHHHHHHHHHH
Q 014689 68 VPEHLMHKNRLQEHAQRSGIPL--PVYQS-HN-EGFQHAPKFRASVSVD---GVTYTSPNTFSHRKAAEQDVAKIALECI 140 (420)
Q Consensus 68 l~~~~npKS~LQE~cQK~g~~l--P~Yev-~~-eGP~H~p~FtvtV~V~---G~~~~~Gg~GsSKKeAEq~AAk~AL~~L 140 (420)
+.+...||+.|....|+--... -.|.+ .. +|. +.=.|++.+. -+.|. +.|+.|-+||++||..|+..|
T Consensus 13 L~~Fp~PKnLL~~ViqrA~~ss~~kd~l~~~~t~g~---k~K~~tl~l~WP~~mef~--a~G~rK~eAE~kAAA~AC~kL 87 (119)
T 2db2_A 13 LKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGP---KKKKVTLHIKWPKSVEVE--GYGSKKIDAERQAAAAACQLF 87 (119)
T ss_dssp TTTCSCHHHHHHHHHHHHTTHHHHHHHEEEEECCSS---SSEEEEEEECSSSCEEEE--EEESSHHHHHHHHHHHHHHHH
T ss_pred HHhCCChHHHHHHHHHHHHccCchhhheeEEeecCC---ceeEEEEEecCCCcEEEE--eeccchHHHHHHHHHHHHHHH
Confidence 3455689999999888732110 12311 11 443 2336666664 35553 369999999999999999999
Q ss_pred HhcccC
Q 014689 141 SKKIKD 146 (420)
Q Consensus 141 ~~~~~~ 146 (420)
+..+..
T Consensus 88 K~Lgll 93 (119)
T 2db2_A 88 KGWGLL 93 (119)
T ss_dssp HHHTSS
T ss_pred HHcCcc
Confidence 987654
No 74
>2db2_A KIAA0890 protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.99 E-value=4.6 Score=34.70 Aligned_cols=69 Identities=17% Similarity=-0.065 Sum_probs=43.2
Q ss_pred CChhHHHHHHHHHcCCCC--CcEEEeecCCCCCeEEEEEEEC--C-EEeeeeeecCHHHHHHHHHHHHHHHHHhh
Q 014689 157 VFCKSILNEFAVKMNLEL--PAYSTRQSEALLPVFVSSLVFN--G-VTYTGEPGRSKKEAEQLAARAVIRTLLVT 226 (420)
Q Consensus 157 ~n~Ks~LqE~cQk~~~~l--P~Y~~~~~p~H~~~F~~~V~I~--G-k~~~~G~G~SKK~AKq~AA~~AL~~L~~~ 226 (420)
..+|++|+...|+---.. =.|.+...-.+.++=.|++.+. . .+| .|.|+.|-+||+.||..|+++|+..
T Consensus 17 p~PKnLL~~ViqrA~~ss~~kd~l~~~~t~g~k~K~~tl~l~WP~~mef-~a~G~rK~eAE~kAAA~AC~kLK~L 90 (119)
T 2db2_A 17 PQPKNLLNSVIGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEV-EGYGSKKIDAERQAAAAACQLFKGW 90 (119)
T ss_dssp SCHHHHHHHHHHHHTTHHHHHHHEEEEECCSSSSEEEEEEECSSSCEEE-EEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHccCchhhheeEEeecCCceeEEEEEecCCCcEEE-EeeccchHHHHHHHHHHHHHHHHHc
Confidence 368999998887642110 0121111112223345666554 2 333 5999999999999999999999864
No 75
>1tac_A TAT protein; transcription regulation, HIV-1, transactivation, RNA binding, structure; NMR {Human immunodeficiency virus 1} SCOP: j.40.1.1
Probab=33.75 E-value=16 Score=29.80 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=25.4
Q ss_pred cccchhhhhhhhhhhhccccccccCCccccccCCCC
Q 014689 378 GGSSSTNKRRKNKRKANKKLRTDAQPCVSAQPLTQV 413 (420)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
.|-+-|+|||+.+|..-+ -..+-|.+++-|||.|.
T Consensus 43 LGIsYgRkkRr~RRr~p~-~~~~hq~~~~kqp~sq~ 77 (86)
T 1tac_A 43 LGISYGRKKRRQRRRPSQ-GGQTHQDPIPKQPSSQP 77 (86)
T ss_dssp SSSSSCCCSGGGSCTTCC-SSCCCSSSSTTCCSSTT
T ss_pred CceEeccccccccCCCCC-CCCCCcCcCCCCCCCCC
Confidence 567778888776655444 45567999999999874
No 76
>3mi9_C Protein TAT; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Human immunodeficiency virus type 1} PDB: 3mia_C* 1jfw_A 1tbc_A 1tiv_A 1k5k_A
Probab=25.38 E-value=15 Score=29.87 Aligned_cols=35 Identities=31% Similarity=0.420 Sum_probs=4.7
Q ss_pred cccchhhhhhhhhhhhccccccccCCccccccCCCC
Q 014689 378 GGSSSTNKRRKNKRKANKKLRTDAQPCVSAQPLTQV 413 (420)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
.|-+-|+|+|+.++.+-+ -..+-|.+++-||+.|.
T Consensus 43 LGIsYgRkkRrqRRr~p~-~s~~hq~~~~kQp~sq~ 77 (86)
T 3mi9_C 43 LGISYGRKKRRQRRRAHQ-NSQTHQASLSKQPTSQS 77 (86)
T ss_dssp SCCCSCC-----------------------------
T ss_pred CccccccccccccCCCCC-CCCCCcCcCCcCCCCCC
Confidence 466777777655555443 34578899999999874
No 77
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=21.01 E-value=1.8e+02 Score=26.33 Aligned_cols=116 Identities=17% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCeEEEEEEECCEEeecCCccccchHHHHHHHHHHHHHHHhcccC-CCCCCC---C---CCCCChhHHHHHHHHHcCCCC
Q 014689 102 APKFRASVSVDGVTYTSPNTFSHRKAAEQDVAKIALECISKKIKD-EGCPLI---N---QDTVFCKSILNEFAVKMNLEL 174 (420)
Q Consensus 102 ~p~FtvtV~V~G~~~~~Gg~GsSKKeAEq~AAk~AL~~L~~~~~~-E~lp~~---~---e~~~n~Ks~LqE~cQk~~~~l 174 (420)
+|.-++.++-.|+.+.+| ++|..+|+. |++...+.|.+.+-. ...+.. + .-+..+.=-|.+++.... ..
T Consensus 56 ~Pk~t~lIF~SGKiv~TG--AkS~e~a~~-a~~~~~~~L~~lg~~~~~~~~~~I~NIVas~~l~~~i~L~~la~~~~-~~ 131 (188)
T 2z8u_A 56 VPKVALLIFRSGKVNCTG--AKSKEEAEI-AIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVE-GT 131 (188)
T ss_dssp TTTEEEEECTTSEEEEEE--ESSHHHHHH-HHHHHHHHHHHTTCCCCSSCCCEEEEEEEEEECSSCCCHHHHHHHST-TE
T ss_pred CCcEEEEEeCCCeEEEec--CCCHHHHHH-HHHHHHHHHHhcCCCccccCceEEEEEEEEEecCCccCHHHHHhhCc-Cc
Confidence 356677777789988875 588888776 666677777765532 111110 0 001122224777776531 22
Q ss_pred CcEEEeecCC-----CCCeEEEEEEECCEEeeeeeecCHHHHHHHHHHHHHHHHH
Q 014689 175 PAYSTRQSEA-----LLPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAVIRTLL 224 (420)
Q Consensus 175 P~Y~~~~~p~-----H~~~F~~~V~I~Gk~~~~G~G~SKK~AKq~AA~~AL~~L~ 224 (420)
.|+-.+-|+ ..+.-++.+...|+.+-+| ++|..++++.. +..+..|.
T Consensus 132 -eYePe~fPgliyR~~~Pk~t~lIF~SGKiviTG-aks~~~~~~A~-~~i~~~L~ 183 (188)
T 2z8u_A 132 -EYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITG-LKSEEDAKRAL-KKILDTIK 183 (188)
T ss_dssp -EECTTTSSSEEEEEETTEEEEEECTTSEEEEES-CSCHHHHHHHH-HHHHHHHH
T ss_pred -EECCccCceEEEEeCCCcEEEEEeCCCEEEEEe-cCCHHHHHHHH-HHHHHHHH
Confidence 444322221 2355666666688877666 67777776544 44445543
Done!