Query 014694
Match_columns 420
No_of_seqs 277 out of 1905
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 07:37:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014694.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014694hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2733 Uncharacterized membra 100.0 7E-86 1.5E-90 631.0 33.1 381 10-415 5-422 (423)
2 COG3268 Uncharacterized conser 100.0 2.7E-47 5.9E-52 363.2 22.3 335 6-413 2-380 (382)
3 PF03435 Saccharop_dh: Sacchar 99.8 4.9E-18 1.1E-22 172.7 12.6 105 13-129 1-106 (386)
4 KOG1502 Flavonol reductase/cin 99.4 1.6E-12 3.5E-17 127.1 12.1 106 9-122 5-129 (327)
5 COG1748 LYS9 Saccharopine dehy 99.4 1.6E-12 3.5E-17 130.5 12.3 107 11-130 2-108 (389)
6 CHL00194 ycf39 Ycf39; Provisio 99.3 2.6E-11 5.7E-16 120.0 12.7 98 11-122 1-110 (317)
7 PF13460 NAD_binding_10: NADH( 99.3 3.6E-11 7.8E-16 108.9 10.5 94 13-122 1-98 (183)
8 PLN02427 UDP-apiose/xylose syn 99.2 7E-11 1.5E-15 120.1 11.8 111 7-123 11-137 (386)
9 PF01073 3Beta_HSD: 3-beta hyd 99.2 1.2E-10 2.5E-15 113.7 9.7 100 14-123 1-117 (280)
10 COG0300 DltE Short-chain dehyd 99.1 1.6E-10 3.6E-15 110.6 9.8 85 9-100 5-96 (265)
11 PLN02214 cinnamoyl-CoA reducta 99.1 4.6E-10 1E-14 112.4 13.2 106 9-122 9-127 (342)
12 PLN02662 cinnamyl-alcohol dehy 99.1 6.3E-10 1.4E-14 109.7 12.2 108 10-124 4-129 (322)
13 PRK15181 Vi polysaccharide bio 99.1 7.3E-10 1.6E-14 111.2 12.2 108 9-123 14-142 (348)
14 PLN03209 translocon at the inn 99.1 9.9E-10 2.1E-14 115.5 13.3 106 10-122 80-208 (576)
15 TIGR01472 gmd GDP-mannose 4,6- 99.1 9E-10 1.9E-14 110.1 12.3 108 12-126 2-136 (343)
16 PLN02986 cinnamyl-alcohol dehy 99.1 1.1E-09 2.4E-14 108.4 12.7 107 10-123 5-129 (322)
17 PLN02896 cinnamyl-alcohol dehy 99.1 1.4E-09 3.1E-14 109.1 13.5 86 5-99 5-90 (353)
18 PLN02650 dihydroflavonol-4-red 99.1 1.3E-09 2.8E-14 109.3 13.1 107 10-123 5-129 (351)
19 PLN02657 3,8-divinyl protochlo 99.1 1.3E-09 2.9E-14 111.2 13.0 108 7-122 57-182 (390)
20 PRK11908 NAD-dependent epimera 99.0 9.5E-10 2.1E-14 110.1 11.0 102 11-124 2-120 (347)
21 PLN00198 anthocyanidin reducta 99.0 2.1E-09 4.6E-14 107.1 13.1 82 9-99 8-91 (338)
22 TIGR03589 PseB UDP-N-acetylglu 99.0 2.5E-09 5.5E-14 106.3 13.6 104 11-122 5-125 (324)
23 PF02719 Polysacc_synt_2: Poly 99.0 6.3E-10 1.4E-14 107.9 7.0 105 13-123 1-129 (293)
24 COG4221 Short-chain alcohol de 99.0 6.5E-09 1.4E-13 97.5 13.5 81 11-101 7-94 (246)
25 PLN02989 cinnamyl-alcohol dehy 99.0 4.3E-09 9.3E-14 104.2 12.5 84 9-99 4-88 (325)
26 PLN02695 GDP-D-mannose-3',5'-e 99.0 3.5E-09 7.6E-14 107.3 11.2 106 6-125 17-140 (370)
27 TIGR03649 ergot_EASG ergot alk 99.0 2.5E-09 5.4E-14 104.0 9.6 94 12-122 1-105 (285)
28 PF05368 NmrA: NmrA-like famil 99.0 6.5E-09 1.4E-13 98.1 11.9 95 13-120 1-100 (233)
29 PRK08125 bifunctional UDP-gluc 99.0 3E-09 6.5E-14 115.7 10.9 106 9-126 314-436 (660)
30 TIGR03466 HpnA hopanoid-associ 98.9 4E-09 8.6E-14 103.9 9.9 99 11-123 1-114 (328)
31 PRK10538 malonic semialdehyde 98.9 1.5E-08 3.3E-13 96.3 13.5 78 11-99 1-85 (248)
32 PRK13394 3-hydroxybutyrate deh 98.9 1.1E-08 2.4E-13 97.5 12.3 82 11-100 8-96 (262)
33 KOG2865 NADH:ubiquinone oxidor 98.9 3.3E-09 7.2E-14 100.8 8.2 102 11-121 62-176 (391)
34 PLN02686 cinnamoyl-CoA reducta 98.9 9.8E-09 2.1E-13 103.9 12.0 106 9-122 52-180 (367)
35 PRK10675 UDP-galactose-4-epime 98.9 1.1E-08 2.4E-13 101.6 12.0 106 11-123 1-125 (338)
36 PLN00141 Tic62-NAD(P)-related 98.9 1.9E-08 4E-13 96.2 13.0 79 9-99 16-96 (251)
37 PLN02166 dTDP-glucose 4,6-dehy 98.9 6.8E-09 1.5E-13 107.4 10.6 104 9-126 119-238 (436)
38 COG1087 GalE UDP-glucose 4-epi 98.9 1E-08 2.3E-13 98.5 11.0 99 11-122 1-118 (329)
39 COG1086 Predicted nucleoside-d 98.9 1.1E-08 2.5E-13 105.7 11.8 108 10-123 250-377 (588)
40 PLN02583 cinnamoyl-CoA reducta 98.9 2.2E-08 4.7E-13 98.3 13.4 107 10-124 6-130 (297)
41 PF01370 Epimerase: NAD depend 98.9 8.1E-09 1.8E-13 96.7 9.9 98 13-123 1-117 (236)
42 TIGR02622 CDP_4_6_dhtase CDP-g 98.9 1.3E-08 2.9E-13 101.9 12.0 103 11-122 5-127 (349)
43 PRK06182 short chain dehydroge 98.9 2.9E-08 6.3E-13 95.8 13.7 76 11-100 4-86 (273)
44 PRK06482 short chain dehydroge 98.9 2.4E-08 5.3E-13 96.4 13.0 79 11-100 3-88 (276)
45 PRK09987 dTDP-4-dehydrorhamnos 98.9 7E-09 1.5E-13 101.9 9.3 89 11-125 1-107 (299)
46 PRK12320 hypothetical protein; 98.9 1E-08 2.2E-13 110.8 11.2 94 11-122 1-102 (699)
47 PRK07231 fabG 3-ketoacyl-(acyl 98.9 2.3E-08 5E-13 94.6 12.4 81 10-99 5-92 (251)
48 PLN02653 GDP-mannose 4,6-dehyd 98.9 1.3E-08 2.8E-13 101.6 11.1 105 10-122 6-139 (340)
49 PRK12429 3-hydroxybutyrate deh 98.9 3.1E-08 6.7E-13 94.1 13.2 82 11-100 5-93 (258)
50 PRK05717 oxidoreductase; Valid 98.9 1.4E-08 3E-13 96.9 10.5 88 1-99 1-95 (255)
51 PRK07453 protochlorophyllide o 98.9 1.4E-08 3.1E-13 100.6 10.9 82 10-99 6-94 (322)
52 PLN02240 UDP-glucose 4-epimera 98.8 2.6E-08 5.7E-13 99.5 12.5 105 11-123 6-133 (352)
53 PRK06196 oxidoreductase; Provi 98.8 3.6E-08 7.7E-13 97.5 13.2 77 11-99 27-110 (315)
54 PRK07825 short chain dehydroge 98.8 3.5E-08 7.6E-13 95.1 12.9 78 11-100 6-90 (273)
55 PLN02572 UDP-sulfoquinovose sy 98.8 3.1E-08 6.7E-13 102.8 13.2 106 9-122 46-191 (442)
56 PLN02206 UDP-glucuronate decar 98.8 1.4E-08 3E-13 105.3 10.6 103 9-126 118-237 (442)
57 PRK06194 hypothetical protein; 98.8 1.4E-08 3.1E-13 98.5 10.0 82 11-100 7-95 (287)
58 PRK09186 flagellin modificatio 98.8 1.7E-08 3.8E-13 95.9 10.3 83 10-99 4-94 (256)
59 PRK08309 short chain dehydroge 98.8 3.7E-08 8.1E-13 89.6 11.9 107 11-129 1-119 (177)
60 PRK09291 short chain dehydroge 98.8 5.2E-08 1.1E-12 92.7 13.5 80 12-99 4-84 (257)
61 PRK12826 3-ketoacyl-(acyl-carr 98.8 1.9E-08 4.1E-13 95.1 10.3 83 10-100 6-95 (251)
62 PRK05866 short chain dehydroge 98.8 2E-08 4.3E-13 98.4 10.7 82 11-100 41-129 (293)
63 PRK07326 short chain dehydroge 98.8 2.5E-08 5.5E-13 93.7 10.9 81 11-100 7-94 (237)
64 PRK06179 short chain dehydroge 98.8 3.4E-08 7.4E-13 95.0 12.0 74 11-100 5-85 (270)
65 PRK05993 short chain dehydroge 98.8 4.4E-08 9.4E-13 95.0 12.6 75 11-99 5-87 (277)
66 PRK07024 short chain dehydroge 98.8 2.5E-08 5.4E-13 95.4 10.5 81 11-100 3-90 (257)
67 TIGR01181 dTDP_gluc_dehyt dTDP 98.8 3.3E-08 7.1E-13 96.7 11.4 104 12-123 1-126 (317)
68 PRK08265 short chain dehydroge 98.8 2.6E-08 5.7E-13 95.6 10.4 78 11-99 7-91 (261)
69 PRK05650 short chain dehydroge 98.8 6.1E-08 1.3E-12 93.4 12.9 81 12-100 2-89 (270)
70 PRK05854 short chain dehydroge 98.8 2.2E-08 4.8E-13 99.1 10.1 84 10-100 14-105 (313)
71 PRK08267 short chain dehydroge 98.8 2.3E-08 5E-13 95.6 9.9 79 12-100 3-89 (260)
72 PLN02253 xanthoxin dehydrogena 98.8 3.7E-08 8E-13 95.3 11.3 80 11-99 19-105 (280)
73 PRK05884 short chain dehydroge 98.8 2.7E-08 5.9E-13 93.4 10.1 76 11-99 1-80 (223)
74 PRK08340 glucose-1-dehydrogena 98.8 2.6E-08 5.7E-13 95.3 10.1 80 11-99 1-87 (259)
75 PRK07523 gluconate 5-dehydroge 98.8 3.2E-08 6.9E-13 94.3 10.6 81 11-99 11-98 (255)
76 PRK07806 short chain dehydroge 98.8 7.9E-08 1.7E-12 91.0 12.9 81 11-99 7-95 (248)
77 PRK06180 short chain dehydroge 98.8 3.6E-08 7.8E-13 95.5 10.7 78 11-99 5-89 (277)
78 PRK07478 short chain dehydroge 98.8 3.6E-08 7.8E-13 93.9 10.6 81 11-99 7-94 (254)
79 PRK07890 short chain dehydroge 98.8 2.2E-08 4.8E-13 95.3 9.1 82 10-99 5-93 (258)
80 PRK08219 short chain dehydroge 98.8 7.6E-08 1.7E-12 89.6 12.5 77 11-100 4-83 (227)
81 PRK05867 short chain dehydroge 98.8 3.5E-08 7.5E-13 94.1 10.3 82 11-100 10-98 (253)
82 KOG1014 17 beta-hydroxysteroid 98.8 2.3E-08 4.9E-13 96.7 8.9 113 13-132 52-172 (312)
83 PRK05876 short chain dehydroge 98.8 2.7E-08 5.8E-13 96.6 9.7 81 11-99 7-94 (275)
84 PRK09135 pteridine reductase; 98.8 3.4E-08 7.3E-13 93.2 10.1 83 10-99 6-96 (249)
85 PRK07814 short chain dehydroge 98.8 4.6E-08 1E-12 93.9 11.0 82 10-99 10-98 (263)
86 PLN02260 probable rhamnose bio 98.8 4.9E-08 1.1E-12 106.4 12.4 107 9-123 5-133 (668)
87 PRK07774 short chain dehydroge 98.8 4.2E-08 9.2E-13 92.9 10.4 81 11-99 7-94 (250)
88 PRK07454 short chain dehydroge 98.8 4.6E-08 1E-12 92.3 10.6 82 11-100 7-95 (241)
89 PRK10217 dTDP-glucose 4,6-dehy 98.8 3.4E-08 7.5E-13 98.9 10.2 79 12-100 3-86 (355)
90 PRK06139 short chain dehydroge 98.8 4.2E-08 9.1E-13 98.0 10.6 81 11-99 8-95 (330)
91 PRK07201 short chain dehydroge 98.8 4.7E-08 1E-12 106.1 11.6 102 11-121 1-124 (657)
92 PRK05865 hypothetical protein; 98.8 5.3E-08 1.2E-12 107.3 12.1 96 11-123 1-104 (854)
93 PRK06200 2,3-dihydroxy-2,3-dih 98.7 6.5E-08 1.4E-12 92.7 11.3 79 10-99 6-91 (263)
94 COG1088 RfbB dTDP-D-glucose 4, 98.7 7.9E-08 1.7E-12 92.2 11.5 106 11-124 1-128 (340)
95 PRK05653 fabG 3-ketoacyl-(acyl 98.7 4.2E-08 9E-13 92.2 9.7 81 11-99 6-93 (246)
96 PRK07067 sorbitol dehydrogenas 98.7 5.9E-08 1.3E-12 92.6 10.7 78 11-99 7-91 (257)
97 PRK07102 short chain dehydroge 98.7 3.2E-08 6.9E-13 93.7 8.8 81 12-99 3-87 (243)
98 PRK06138 short chain dehydroge 98.7 5.2E-08 1.1E-12 92.3 10.3 80 11-99 6-92 (252)
99 PRK07666 fabG 3-ketoacyl-(acyl 98.7 4.9E-08 1.1E-12 92.1 9.9 82 11-100 8-96 (239)
100 PRK08339 short chain dehydroge 98.7 6.2E-08 1.3E-12 93.3 10.8 82 11-99 9-96 (263)
101 TIGR01179 galE UDP-glucose-4-e 98.7 6.9E-08 1.5E-12 94.7 11.2 103 12-123 1-122 (328)
102 PRK12746 short chain dehydroge 98.7 6.7E-08 1.5E-12 91.9 10.7 82 11-100 7-102 (254)
103 PRK07063 short chain dehydroge 98.7 6.4E-08 1.4E-12 92.5 10.2 82 11-99 8-97 (260)
104 PRK12829 short chain dehydroge 98.7 6.9E-08 1.5E-12 92.1 10.4 81 9-99 10-97 (264)
105 PRK06949 short chain dehydroge 98.7 7.5E-08 1.6E-12 91.7 10.6 83 10-100 9-98 (258)
106 PRK07775 short chain dehydroge 98.7 8.5E-08 1.8E-12 92.8 11.0 81 11-99 11-98 (274)
107 PLN02819 lysine-ketoglutarate 98.7 1.4E-07 3E-12 105.6 14.1 116 9-132 568-690 (1042)
108 PLN00016 RNA-binding protein; 98.7 2.5E-08 5.4E-13 101.3 7.6 102 9-123 51-166 (378)
109 PRK06197 short chain dehydroge 98.7 5.2E-08 1.1E-12 95.8 9.6 83 10-99 16-106 (306)
110 TIGR03325 BphB_TodD cis-2,3-di 98.7 6.3E-08 1.4E-12 92.9 10.0 78 11-99 6-90 (262)
111 PRK08643 acetoin reductase; Va 98.7 6.7E-08 1.5E-12 92.1 10.1 80 12-99 4-90 (256)
112 COG3967 DltE Short-chain dehyd 98.7 5.3E-08 1.2E-12 88.8 8.6 79 11-101 6-91 (245)
113 PRK05872 short chain dehydroge 98.7 9.1E-08 2E-12 93.8 11.1 82 10-100 9-97 (296)
114 PRK08251 short chain dehydroge 98.7 7.6E-08 1.6E-12 91.2 10.2 82 11-99 3-92 (248)
115 PRK07109 short chain dehydroge 98.7 7.6E-08 1.6E-12 96.2 10.7 81 11-99 9-96 (334)
116 PRK08589 short chain dehydroge 98.7 2E-07 4.3E-12 90.1 13.2 80 11-99 7-93 (272)
117 PRK08277 D-mannonate oxidoredu 98.7 8.8E-08 1.9E-12 92.6 10.7 82 10-99 10-98 (278)
118 PRK06172 short chain dehydroge 98.7 5.8E-08 1.3E-12 92.3 9.3 81 11-99 8-95 (253)
119 PRK05875 short chain dehydroge 98.7 8.2E-08 1.8E-12 92.6 10.3 82 11-99 8-97 (276)
120 PRK12939 short chain dehydroge 98.7 9.8E-08 2.1E-12 90.2 10.6 81 11-99 8-95 (250)
121 PRK06124 gluconate 5-dehydroge 98.7 8.3E-08 1.8E-12 91.5 10.2 82 10-99 11-99 (256)
122 COG0451 WcaG Nucleoside-diphos 98.7 5.5E-08 1.2E-12 95.0 9.2 95 12-121 2-115 (314)
123 PRK12936 3-ketoacyl-(acyl-carr 98.7 1E-07 2.2E-12 89.8 10.5 79 10-99 6-91 (245)
124 KOG1371 UDP-glucose 4-epimeras 98.7 1.2E-07 2.6E-12 92.1 11.0 105 10-123 2-129 (343)
125 PRK12828 short chain dehydroge 98.7 9.7E-08 2.1E-12 89.4 10.3 80 10-99 7-93 (239)
126 PRK07074 short chain dehydroge 98.7 9.8E-08 2.1E-12 91.0 10.4 78 12-99 4-88 (257)
127 PRK08213 gluconate 5-dehydroge 98.7 8.1E-08 1.8E-12 91.8 9.8 81 11-99 13-100 (259)
128 PRK06500 short chain dehydroge 98.7 1.3E-07 2.7E-12 89.5 10.9 79 11-100 7-92 (249)
129 PRK07097 gluconate 5-dehydroge 98.7 1.1E-07 2.4E-12 91.3 10.6 83 10-100 10-99 (265)
130 TIGR01214 rmlD dTDP-4-dehydror 98.7 7.4E-08 1.6E-12 93.4 9.4 82 12-122 1-100 (287)
131 PRK06181 short chain dehydroge 98.7 1.1E-07 2.4E-12 90.9 10.4 81 12-100 3-90 (263)
132 PRK08263 short chain dehydroge 98.7 8.7E-08 1.9E-12 92.6 9.7 78 12-100 5-89 (275)
133 PRK08063 enoyl-(acyl carrier p 98.7 9.5E-08 2.1E-12 90.5 9.7 81 11-99 5-93 (250)
134 PRK09072 short chain dehydroge 98.7 1E-07 2.3E-12 91.3 10.1 81 11-100 6-92 (263)
135 PF04321 RmlD_sub_bind: RmlD s 98.7 2.4E-08 5.1E-13 97.7 5.6 87 11-126 1-105 (286)
136 PF07993 NAD_binding_4: Male s 98.7 1E-07 2.2E-12 91.2 9.9 103 15-122 1-135 (249)
137 PRK07062 short chain dehydroge 98.7 9E-08 1.9E-12 91.8 9.5 82 11-99 9-98 (265)
138 TIGR03206 benzo_BadH 2-hydroxy 98.7 1.1E-07 2.3E-12 90.1 9.8 81 11-99 4-91 (250)
139 PRK10084 dTDP-glucose 4,6 dehy 98.7 1.5E-07 3.2E-12 94.3 11.3 107 11-126 1-137 (352)
140 PRK07904 short chain dehydroge 98.7 1.1E-07 2.3E-12 91.2 9.8 86 9-100 7-99 (253)
141 PRK07832 short chain dehydroge 98.7 1.2E-07 2.7E-12 91.4 10.3 81 12-99 2-89 (272)
142 PRK08085 gluconate 5-dehydroge 98.7 1E-07 2.2E-12 90.8 9.6 82 10-99 9-97 (254)
143 PRK06101 short chain dehydroge 98.7 1.3E-07 2.7E-12 89.6 10.1 76 12-99 3-82 (240)
144 KOG1205 Predicted dehydrogenas 98.7 8.2E-08 1.8E-12 92.9 8.8 84 10-100 12-103 (282)
145 PRK09134 short chain dehydroge 98.7 1.2E-07 2.5E-12 90.7 9.9 83 10-100 9-99 (258)
146 PRK05565 fabG 3-ketoacyl-(acyl 98.7 1.1E-07 2.5E-12 89.5 9.8 81 11-99 6-94 (247)
147 PRK06057 short chain dehydroge 98.7 1.7E-07 3.6E-12 89.5 10.9 76 11-99 8-90 (255)
148 TIGR01746 Thioester-redct thio 98.7 2.2E-07 4.8E-12 92.5 12.2 106 12-122 1-136 (367)
149 PRK07060 short chain dehydroge 98.6 2E-07 4.4E-12 87.9 11.1 77 11-100 10-89 (245)
150 COG2910 Putative NADH-flavin r 98.6 1.9E-07 4.2E-12 83.8 10.0 75 11-101 1-75 (211)
151 PRK11150 rfaD ADP-L-glycero-D- 98.6 6.4E-08 1.4E-12 95.0 7.8 96 13-126 2-120 (308)
152 PRK08628 short chain dehydroge 98.6 1.3E-07 2.7E-12 90.3 9.4 80 11-99 8-94 (258)
153 PRK06914 short chain dehydroge 98.6 1.4E-07 3E-12 91.2 9.8 81 12-100 5-93 (280)
154 PRK07677 short chain dehydroge 98.6 1.3E-07 2.8E-12 90.1 9.2 81 11-99 2-89 (252)
155 PRK06935 2-deoxy-D-gluconate 3 98.6 1.7E-07 3.8E-12 89.5 9.9 82 10-100 15-103 (258)
156 PRK12384 sorbitol-6-phosphate 98.6 1.3E-07 2.8E-12 90.2 9.0 81 12-99 4-92 (259)
157 TIGR01963 PHB_DH 3-hydroxybuty 98.6 1.5E-07 3.2E-12 89.3 9.3 81 12-100 3-90 (255)
158 PF00106 adh_short: short chai 98.6 1.8E-07 4E-12 82.9 9.2 82 12-100 2-92 (167)
159 PLN02778 3,5-epimerase/4-reduc 98.6 3E-07 6.4E-12 90.5 11.5 82 8-121 7-109 (298)
160 KOG1430 C-3 sterol dehydrogena 98.6 1.8E-07 4E-12 93.4 10.0 107 8-120 2-124 (361)
161 PRK05599 hypothetical protein; 98.6 1.9E-07 4.1E-12 89.0 9.7 82 11-100 1-89 (246)
162 PRK07576 short chain dehydroge 98.6 1.6E-07 3.4E-12 90.4 9.2 81 11-99 10-97 (264)
163 TIGR02415 23BDH acetoin reduct 98.6 1.6E-07 3.4E-12 89.3 9.0 80 12-99 2-88 (254)
164 PRK06113 7-alpha-hydroxysteroi 98.6 2.5E-07 5.3E-12 88.3 10.3 82 10-99 11-99 (255)
165 PRK12825 fabG 3-ketoacyl-(acyl 98.6 1.8E-07 3.8E-12 88.0 9.0 80 11-98 7-94 (249)
166 PRK05693 short chain dehydroge 98.6 2.2E-07 4.7E-12 89.7 9.8 74 12-99 3-83 (274)
167 PRK07035 short chain dehydroge 98.6 2.1E-07 4.6E-12 88.4 9.5 80 11-98 9-95 (252)
168 PRK08264 short chain dehydroge 98.6 2.5E-07 5.4E-12 87.1 9.9 74 10-98 6-83 (238)
169 PRK08177 short chain dehydroge 98.6 2.2E-07 4.9E-12 87.0 9.5 76 12-100 3-83 (225)
170 PRK05557 fabG 3-ketoacyl-(acyl 98.6 3E-07 6.6E-12 86.4 10.4 82 11-100 6-95 (248)
171 PRK07069 short chain dehydroge 98.6 2.1E-07 4.6E-12 88.1 9.4 82 12-100 1-91 (251)
172 PRK12823 benD 1,6-dihydroxycyc 98.6 2.5E-07 5.3E-12 88.4 9.9 79 11-98 9-94 (260)
173 PRK08416 7-alpha-hydroxysteroi 98.6 2.2E-07 4.7E-12 89.1 9.5 82 11-99 9-98 (260)
174 PRK05855 short chain dehydroge 98.6 2.1E-07 4.5E-12 98.8 10.3 84 9-100 314-404 (582)
175 TIGR02197 heptose_epim ADP-L-g 98.6 2.9E-07 6.2E-12 90.2 10.4 98 13-124 1-116 (314)
176 PRK08278 short chain dehydroge 98.6 3.1E-07 6.7E-12 88.9 10.2 81 11-99 7-101 (273)
177 PRK12745 3-ketoacyl-(acyl-carr 98.6 3.1E-07 6.7E-12 87.3 10.1 81 11-99 3-91 (256)
178 COG1091 RfbD dTDP-4-dehydrorha 98.6 1.4E-07 3E-12 91.2 7.6 86 11-126 1-104 (281)
179 PRK06125 short chain dehydroge 98.6 3.3E-07 7.1E-12 87.6 10.2 82 11-99 8-92 (259)
180 PLN02996 fatty acyl-CoA reduct 98.6 4.8E-07 1E-11 95.1 12.2 110 9-122 10-161 (491)
181 PRK08642 fabG 3-ketoacyl-(acyl 98.6 3.6E-07 7.8E-12 86.6 10.0 77 11-98 6-91 (253)
182 PRK07041 short chain dehydroge 98.6 2.7E-07 5.8E-12 86.4 9.0 77 14-99 1-80 (230)
183 PRK12827 short chain dehydroge 98.6 4.1E-07 8.9E-12 85.8 10.3 83 10-100 6-99 (249)
184 PRK07424 bifunctional sterol d 98.5 3.7E-07 8E-12 93.4 10.6 79 10-99 178-256 (406)
185 PRK08217 fabG 3-ketoacyl-(acyl 98.5 3.3E-07 7.1E-12 86.7 9.6 82 10-99 5-93 (253)
186 PRK06114 short chain dehydroge 98.5 3.5E-07 7.7E-12 87.2 9.8 82 11-100 9-98 (254)
187 PRK05786 fabG 3-ketoacyl-(acyl 98.5 3.5E-07 7.5E-12 86.0 9.6 81 11-100 6-93 (238)
188 COG0702 Predicted nucleoside-d 98.5 3.4E-07 7.3E-12 87.7 9.6 95 11-120 1-105 (275)
189 PRK08862 short chain dehydroge 98.5 4.2E-07 9.1E-12 85.8 10.1 80 11-98 6-93 (227)
190 PRK12935 acetoacetyl-CoA reduc 98.5 4E-07 8.7E-12 86.1 10.0 82 11-100 7-96 (247)
191 PRK08226 short chain dehydroge 98.5 5.4E-07 1.2E-11 86.2 10.9 80 11-99 7-93 (263)
192 PRK12938 acetyacetyl-CoA reduc 98.5 1E-06 2.2E-11 83.4 12.6 82 11-100 4-93 (246)
193 PRK06947 glucose-1-dehydrogena 98.5 4.1E-07 8.8E-12 86.2 9.9 80 12-99 4-91 (248)
194 PRK06198 short chain dehydroge 98.5 3.3E-07 7.2E-12 87.4 9.4 81 11-99 7-95 (260)
195 PRK09242 tropinone reductase; 98.5 3.5E-07 7.5E-12 87.3 9.3 82 11-99 10-99 (257)
196 TIGR01832 kduD 2-deoxy-D-gluco 98.5 4.2E-07 9.1E-12 86.1 9.7 79 11-100 6-92 (248)
197 PRK06123 short chain dehydroge 98.5 4.7E-07 1E-11 85.7 9.8 80 12-99 4-91 (248)
198 PRK08703 short chain dehydroge 98.5 5.7E-07 1.2E-11 84.8 10.3 82 11-99 7-98 (239)
199 PRK12481 2-deoxy-D-gluconate 3 98.5 6.9E-07 1.5E-11 85.3 10.9 79 11-100 9-95 (251)
200 PRK07856 short chain dehydroge 98.5 4.1E-07 9E-12 86.6 9.3 74 10-99 6-86 (252)
201 TIGR01500 sepiapter_red sepiap 98.5 3.3E-07 7.2E-12 87.6 8.6 81 12-99 2-98 (256)
202 KOG1208 Dehydrogenases with di 98.5 4.8E-07 1E-11 89.5 9.8 85 10-101 35-127 (314)
203 PRK12937 short chain dehydroge 98.5 5.7E-07 1.2E-11 84.8 10.0 81 11-99 6-94 (245)
204 TIGR01289 LPOR light-dependent 98.5 6.6E-07 1.4E-11 88.6 10.7 82 11-99 4-92 (314)
205 PRK09730 putative NAD(P)-bindi 98.5 3.6E-07 7.9E-12 86.1 8.5 80 12-99 3-90 (247)
206 PRK06483 dihydromonapterin red 98.5 5.5E-07 1.2E-11 84.8 9.6 76 11-99 3-85 (236)
207 PRK07791 short chain dehydroge 98.5 6.9E-07 1.5E-11 87.2 10.5 83 10-100 6-104 (286)
208 PRK08945 putative oxoacyl-(acy 98.5 7.7E-07 1.7E-11 84.4 10.5 84 9-99 11-103 (247)
209 PRK06720 hypothetical protein; 98.5 9.3E-07 2E-11 79.9 10.5 83 10-100 16-105 (169)
210 PRK06841 short chain dehydroge 98.5 6.5E-07 1.4E-11 85.1 9.9 80 10-100 15-101 (255)
211 cd01078 NAD_bind_H4MPT_DH NADP 98.5 9.5E-07 2.1E-11 81.3 10.6 109 9-127 27-135 (194)
212 TIGR01829 AcAcCoA_reduct aceto 98.5 5.9E-07 1.3E-11 84.4 9.5 80 12-99 2-89 (242)
213 PRK12742 oxidoreductase; Provi 98.5 8.6E-07 1.9E-11 83.2 10.4 76 11-99 7-86 (237)
214 PLN02503 fatty acyl-CoA reduct 98.5 1.2E-06 2.7E-11 93.6 12.8 111 9-123 118-269 (605)
215 PRK06079 enoyl-(acyl carrier p 98.5 7.5E-07 1.6E-11 85.1 10.1 78 11-99 8-94 (252)
216 TIGR01830 3oxo_ACP_reduc 3-oxo 98.5 4.4E-07 9.6E-12 85.0 8.4 79 13-99 1-87 (239)
217 TIGR02685 pter_reduc_Leis pter 98.5 5.7E-07 1.2E-11 86.5 9.3 81 12-99 3-95 (267)
218 TIGR01777 yfcH conserved hypot 98.5 4.6E-07 9.9E-12 87.7 8.4 84 13-115 1-102 (292)
219 PRK07831 short chain dehydroge 98.5 6.5E-07 1.4E-11 85.7 8.9 83 10-99 17-108 (262)
220 PRK12743 oxidoreductase; Provi 98.5 8.8E-07 1.9E-11 84.6 9.8 81 12-100 4-92 (256)
221 PRK07201 short chain dehydroge 98.4 7E-07 1.5E-11 96.9 10.2 81 11-99 372-459 (657)
222 PLN02780 ketoreductase/ oxidor 98.4 6.8E-07 1.5E-11 88.9 9.2 82 11-99 54-143 (320)
223 PRK06701 short chain dehydroge 98.4 7.1E-07 1.5E-11 87.3 9.2 81 11-99 47-135 (290)
224 PRK06953 short chain dehydroge 98.4 9E-07 1.9E-11 82.7 9.4 74 12-99 3-81 (222)
225 PRK12367 short chain dehydroge 98.4 8.6E-07 1.9E-11 84.7 9.4 75 11-99 15-90 (245)
226 PRK12747 short chain dehydroge 98.4 1.1E-06 2.3E-11 83.7 10.0 81 11-99 5-99 (252)
227 PRK06924 short chain dehydroge 98.4 6.2E-07 1.4E-11 85.0 8.4 77 12-99 3-91 (251)
228 PRK06398 aldose dehydrogenase; 98.4 6.5E-07 1.4E-11 85.8 8.5 70 11-99 7-83 (258)
229 PRK06484 short chain dehydroge 98.4 8.8E-07 1.9E-11 93.5 10.3 79 10-99 269-354 (520)
230 PRK07533 enoyl-(acyl carrier p 98.4 1.4E-06 3E-11 83.6 10.8 86 1-99 2-99 (258)
231 PRK06128 oxidoreductase; Provi 98.4 7.9E-07 1.7E-11 87.3 9.3 81 11-99 56-145 (300)
232 PRK06940 short chain dehydroge 98.4 9.3E-07 2E-11 85.7 9.6 78 12-99 4-87 (275)
233 PRK07023 short chain dehydroge 98.4 6.7E-07 1.5E-11 84.6 8.4 77 11-100 2-89 (243)
234 PRK06523 short chain dehydroge 98.4 9.1E-07 2E-11 84.5 9.2 72 11-99 10-88 (260)
235 PRK08936 glucose-1-dehydrogena 98.4 9.5E-07 2.1E-11 84.5 9.3 81 11-99 8-96 (261)
236 PRK07792 fabG 3-ketoacyl-(acyl 98.4 1E-06 2.2E-11 86.8 9.8 83 10-100 12-101 (306)
237 PRK06463 fabG 3-ketoacyl-(acyl 98.4 1.5E-06 3.1E-11 83.0 10.5 75 11-99 8-90 (255)
238 PRK12744 short chain dehydroge 98.4 1.3E-06 2.8E-11 83.4 10.1 81 11-99 9-100 (257)
239 PRK08017 oxidoreductase; Provi 98.4 1.1E-06 2.4E-11 83.4 9.4 74 12-99 4-85 (256)
240 PRK08324 short chain dehydroge 98.4 2.7E-06 5.8E-11 93.0 13.4 81 11-100 423-510 (681)
241 PRK06171 sorbitol-6-phosphate 98.4 8.6E-07 1.9E-11 85.0 8.4 72 11-99 10-88 (266)
242 PLN02725 GDP-4-keto-6-deoxyman 98.4 6.1E-07 1.3E-11 87.6 7.5 82 14-123 1-102 (306)
243 PRK07889 enoyl-(acyl carrier p 98.4 1.7E-06 3.6E-11 83.0 10.2 78 11-99 8-96 (256)
244 PRK12824 acetoacetyl-CoA reduc 98.4 1.6E-06 3.4E-11 81.7 9.9 80 12-99 4-91 (245)
245 PRK07984 enoyl-(acyl carrier p 98.4 1.7E-06 3.7E-11 83.5 10.1 80 11-99 7-95 (262)
246 TIGR02632 RhaD_aldol-ADH rhamn 98.4 1.7E-06 3.7E-11 94.4 11.2 83 11-100 415-505 (676)
247 PRK06484 short chain dehydroge 98.4 1.5E-06 3.3E-11 91.7 10.6 78 10-98 5-89 (520)
248 PRK08303 short chain dehydroge 98.4 1.4E-06 3E-11 86.0 9.5 79 11-97 9-105 (305)
249 KOG1429 dTDP-glucose 4-6-dehyd 98.4 1.2E-06 2.5E-11 83.7 8.3 100 7-121 24-140 (350)
250 PRK06077 fabG 3-ketoacyl-(acyl 98.4 2.1E-06 4.7E-11 81.2 10.3 80 11-98 7-94 (252)
251 TIGR01831 fabG_rel 3-oxoacyl-( 98.4 1.1E-06 2.4E-11 82.7 8.1 80 13-100 1-88 (239)
252 PRK08415 enoyl-(acyl carrier p 98.4 2.6E-06 5.7E-11 82.7 10.6 77 11-99 6-94 (274)
253 KOG1201 Hydroxysteroid 17-beta 98.3 3.5E-06 7.5E-11 81.4 10.9 96 11-115 39-146 (300)
254 PRK08594 enoyl-(acyl carrier p 98.3 2.4E-06 5.1E-11 82.0 9.9 79 11-99 8-98 (257)
255 PLN00015 protochlorophyllide r 98.3 2E-06 4.4E-11 84.8 9.6 79 14-99 1-86 (308)
256 PRK08993 2-deoxy-D-gluconate 3 98.3 2.3E-06 4.9E-11 81.7 9.6 79 11-99 11-96 (253)
257 PRK08159 enoyl-(acyl carrier p 98.3 3E-06 6.6E-11 82.1 10.5 77 11-99 11-99 (272)
258 PRK08690 enoyl-(acyl carrier p 98.3 2.9E-06 6.3E-11 81.6 10.2 81 11-100 7-96 (261)
259 PRK07985 oxidoreductase; Provi 98.3 1.7E-06 3.7E-11 84.8 8.8 81 11-99 50-139 (294)
260 PRK08220 2,3-dihydroxybenzoate 98.3 2.5E-06 5.4E-11 80.9 9.3 73 11-100 9-88 (252)
261 PRK07577 short chain dehydroge 98.3 2.5E-06 5.5E-11 79.9 9.2 71 11-100 4-80 (234)
262 TIGR00715 precor6x_red precorr 98.3 1.8E-06 4E-11 83.0 7.8 96 11-121 1-99 (256)
263 PRK06505 enoyl-(acyl carrier p 98.3 3.3E-06 7.1E-11 81.8 9.6 77 11-99 8-96 (271)
264 smart00822 PKS_KR This enzymat 98.3 2.8E-06 6.2E-11 74.9 8.5 81 12-99 2-92 (180)
265 COG3320 Putative dehydrogenase 98.3 5.3E-06 1.1E-10 82.6 10.3 104 12-121 2-134 (382)
266 KOG1200 Mitochondrial/plastidi 98.2 7E-06 1.5E-10 74.5 9.8 82 11-101 15-103 (256)
267 PRK06603 enoyl-(acyl carrier p 98.2 6.3E-06 1.4E-10 79.2 10.3 80 11-99 9-97 (260)
268 KOG0725 Reductases with broad 98.2 5.5E-06 1.2E-10 80.4 9.9 85 10-101 8-102 (270)
269 PRK09009 C factor cell-cell si 98.2 4.3E-06 9.3E-11 78.5 8.6 76 11-100 1-79 (235)
270 PF08659 KR: KR domain; Inter 98.2 3.7E-06 8E-11 76.6 7.5 82 12-100 2-93 (181)
271 PRK07370 enoyl-(acyl carrier p 98.2 5.4E-06 1.2E-10 79.5 9.0 81 11-99 7-98 (258)
272 PLN02260 probable rhamnose bio 98.2 5.8E-06 1.3E-10 90.2 10.1 82 9-122 379-481 (668)
273 PRK06997 enoyl-(acyl carrier p 98.2 7.7E-06 1.7E-10 78.6 9.7 77 11-99 7-95 (260)
274 PRK08261 fabG 3-ketoacyl-(acyl 98.2 1.1E-05 2.3E-10 83.9 11.0 77 11-100 211-296 (450)
275 PRK12548 shikimate 5-dehydroge 98.2 1.7E-05 3.7E-10 77.8 11.7 80 11-98 127-209 (289)
276 PRK12748 3-ketoacyl-(acyl-carr 98.2 8E-06 1.7E-10 77.9 9.0 81 11-99 6-106 (256)
277 PRK06550 fabG 3-ketoacyl-(acyl 98.2 4.6E-06 1E-10 78.2 7.2 72 11-99 6-78 (235)
278 PRK12859 3-ketoacyl-(acyl-carr 98.1 1.5E-05 3.3E-10 76.1 10.0 81 11-99 7-107 (256)
279 COG1090 Predicted nucleoside-d 98.0 4.7E-06 1E-10 79.6 4.6 66 13-99 1-67 (297)
280 PF01118 Semialdhyde_dh: Semia 98.0 1.5E-05 3.2E-10 67.8 7.1 99 12-125 1-101 (121)
281 PRK07578 short chain dehydroge 98.0 2.4E-05 5.1E-10 71.8 7.9 63 11-99 1-66 (199)
282 COG1028 FabG Dehydrogenases wi 97.9 6.7E-05 1.5E-09 71.1 10.4 84 9-100 4-98 (251)
283 KOG1611 Predicted short chain- 97.9 8.9E-05 1.9E-09 69.0 10.2 109 12-132 5-129 (249)
284 KOG1209 1-Acyl dihydroxyaceton 97.9 9.7E-05 2.1E-09 68.1 9.9 92 9-113 6-111 (289)
285 PF01488 Shikimate_DH: Shikima 97.9 7.5E-05 1.6E-09 64.8 8.9 76 9-99 11-86 (135)
286 KOG1203 Predicted dehydrogenas 97.9 7.3E-05 1.6E-09 75.9 9.9 105 7-120 76-199 (411)
287 KOG1478 3-keto sterol reductas 97.8 7.3E-05 1.6E-09 70.5 8.7 99 12-112 5-113 (341)
288 KOG4169 15-hydroxyprostaglandi 97.8 5.7E-05 1.2E-09 70.3 7.9 83 10-100 5-95 (261)
289 TIGR03443 alpha_am_amid L-amin 97.8 0.00011 2.3E-09 86.6 12.4 110 10-122 971-1109(1389)
290 PF13561 adh_short_C2: Enoyl-( 97.8 4.2E-05 9.2E-10 72.3 7.0 76 17-101 1-86 (241)
291 PRK14982 acyl-ACP reductase; P 97.8 8.7E-05 1.9E-09 74.1 9.1 89 10-121 155-246 (340)
292 cd01336 MDH_cytoplasmic_cytoso 97.8 0.0001 2.2E-09 73.5 8.8 88 9-101 1-91 (325)
293 PRK00436 argC N-acetyl-gamma-g 97.8 7.5E-05 1.6E-09 75.1 7.9 102 11-127 3-105 (343)
294 PLN02968 Probable N-acetyl-gam 97.7 4.5E-05 9.7E-10 77.6 6.1 104 8-127 36-140 (381)
295 PLN02730 enoyl-[acyl-carrier-p 97.7 0.00011 2.5E-09 72.5 8.6 81 10-98 9-130 (303)
296 cd01065 NAD_bind_Shikimate_DH 97.7 0.00018 4E-09 63.2 8.9 100 10-125 19-120 (155)
297 TIGR01850 argC N-acetyl-gamma- 97.7 8.3E-05 1.8E-09 74.8 7.0 104 11-127 1-105 (346)
298 KOG1210 Predicted 3-ketosphing 97.7 0.00014 3E-09 70.8 8.0 82 11-99 34-123 (331)
299 PRK14874 aspartate-semialdehyd 97.6 0.00016 3.5E-09 72.4 8.3 98 11-126 2-99 (334)
300 KOG0172 Lysine-ketoglutarate r 97.6 0.00023 4.9E-09 70.9 8.8 106 11-131 3-109 (445)
301 PRK05671 aspartate-semialdehyd 97.6 0.00013 2.9E-09 72.9 7.3 101 8-126 2-102 (336)
302 KOG1221 Acyl-CoA reductase [Li 97.6 0.00047 1E-08 71.2 11.2 110 10-123 12-156 (467)
303 KOG1199 Short-chain alcohol de 97.6 0.00021 4.5E-09 63.8 7.1 82 7-99 6-94 (260)
304 COG0569 TrkA K+ transport syst 97.5 0.00046 1E-08 65.2 9.6 98 11-121 1-99 (225)
305 PF00056 Ldh_1_N: lactate/mala 97.5 0.00098 2.1E-08 58.3 11.0 112 11-132 1-129 (141)
306 PTZ00325 malate dehydrogenase; 97.5 0.00051 1.1E-08 68.3 9.9 96 11-116 9-118 (321)
307 PLN00106 malate dehydrogenase 97.5 0.00038 8.1E-09 69.3 8.9 84 8-101 16-99 (323)
308 PRK12549 shikimate 5-dehydroge 97.4 0.00059 1.3E-08 66.8 9.0 74 10-96 127-200 (284)
309 COG0002 ArgC Acetylglutamate s 97.4 0.0005 1.1E-08 68.0 8.1 106 10-127 2-107 (349)
310 PF00899 ThiF: ThiF family; I 97.4 0.00081 1.7E-08 58.1 8.3 104 9-121 1-124 (135)
311 PRK13656 trans-2-enoyl-CoA red 97.4 0.0013 2.8E-08 66.6 10.6 80 8-99 39-142 (398)
312 COG0373 HemA Glutamyl-tRNA red 97.4 0.0016 3.6E-08 66.4 11.3 94 10-121 178-274 (414)
313 TIGR02813 omega_3_PfaA polyket 97.4 0.00061 1.3E-08 83.5 9.6 84 10-100 1997-2133(2582)
314 PRK05086 malate dehydrogenase; 97.3 0.002 4.3E-08 63.9 11.1 97 11-116 1-111 (312)
315 PRK00258 aroE shikimate 5-dehy 97.3 0.0013 2.8E-08 64.2 9.6 106 10-131 123-234 (278)
316 PLN02383 aspartate semialdehyd 97.3 0.0012 2.7E-08 66.3 9.6 99 8-126 5-105 (344)
317 PRK06732 phosphopantothenate-- 97.3 0.00074 1.6E-08 64.0 7.6 73 13-100 19-93 (229)
318 TIGR02356 adenyl_thiF thiazole 97.3 0.0016 3.4E-08 60.6 9.5 103 9-121 20-143 (202)
319 TIGR01296 asd_B aspartate-semi 97.3 0.00069 1.5E-08 68.0 7.5 97 12-126 1-97 (339)
320 PRK14027 quinate/shikimate deh 97.3 0.0031 6.7E-08 61.7 11.8 77 10-97 127-203 (283)
321 KOG1610 Corticosteroid 11-beta 97.3 0.0032 6.9E-08 61.5 11.5 107 11-132 30-151 (322)
322 TIGR00518 alaDH alanine dehydr 97.2 0.0028 6E-08 64.4 11.7 97 9-121 166-267 (370)
323 PRK08664 aspartate-semialdehyd 97.2 0.0012 2.7E-08 66.4 9.0 105 10-126 3-112 (349)
324 PRK07688 thiamine/molybdopteri 97.2 0.002 4.4E-08 64.6 10.1 103 10-121 24-148 (339)
325 PRK12749 quinate/shikimate deh 97.2 0.0043 9.4E-08 60.8 12.2 79 11-98 125-206 (288)
326 KOG1207 Diacetyl reductase/L-x 97.2 0.0011 2.4E-08 59.4 7.0 80 11-101 8-90 (245)
327 PRK12475 thiamine/molybdopteri 97.2 0.0022 4.7E-08 64.4 10.1 102 10-120 24-147 (338)
328 TIGR00507 aroE shikimate 5-deh 97.2 0.0028 6.1E-08 61.5 10.6 98 10-124 117-217 (270)
329 TIGR01809 Shik-DH-AROM shikima 97.2 0.0027 5.9E-08 62.0 10.5 77 10-99 125-201 (282)
330 PRK09496 trkA potassium transp 97.2 0.0022 4.7E-08 66.6 10.4 91 11-116 1-93 (453)
331 PRK14106 murD UDP-N-acetylmura 97.2 0.0024 5.2E-08 66.3 10.7 92 10-119 5-97 (450)
332 cd05213 NAD_bind_Glutamyl_tRNA 97.2 0.0033 7.2E-08 62.3 11.1 93 9-121 177-273 (311)
333 KOG4039 Serine/threonine kinas 97.2 0.0014 3E-08 59.0 7.3 99 10-121 18-130 (238)
334 cd00704 MDH Malate dehydrogena 97.2 0.0037 8E-08 62.3 11.3 88 11-102 1-90 (323)
335 COG0169 AroE Shikimate 5-dehyd 97.1 0.0033 7.1E-08 61.4 10.1 109 10-132 126-240 (283)
336 PRK00048 dihydrodipicolinate r 97.1 0.0014 3.1E-08 63.1 7.5 87 11-119 2-89 (257)
337 PF03807 F420_oxidored: NADP o 97.1 0.0079 1.7E-07 48.4 10.8 91 12-121 1-94 (96)
338 PRK08644 thiamine biosynthesis 97.1 0.0042 9E-08 58.2 10.0 106 9-123 27-152 (212)
339 cd01483 E1_enzyme_family Super 97.0 0.0058 1.3E-07 53.2 10.2 102 12-123 1-123 (143)
340 TIGR00978 asd_EA aspartate-sem 97.0 0.0032 6.9E-08 63.3 9.1 104 11-126 1-109 (341)
341 PRK08223 hypothetical protein; 97.0 0.0045 9.8E-08 60.4 9.6 103 9-120 26-150 (287)
342 PRK08762 molybdopterin biosynt 97.0 0.0045 9.8E-08 63.0 10.0 103 9-121 134-257 (376)
343 cd00757 ThiF_MoeB_HesA_family 96.9 0.0061 1.3E-07 57.6 10.0 103 10-121 21-143 (228)
344 PRK11863 N-acetyl-gamma-glutam 96.9 0.0021 4.6E-08 63.6 7.0 85 10-126 2-86 (313)
345 TIGR01851 argC_other N-acetyl- 96.9 0.0025 5.4E-08 62.8 7.3 84 11-126 2-85 (310)
346 cd01487 E1_ThiF_like E1_ThiF_l 96.9 0.0072 1.6E-07 54.8 9.8 103 12-123 1-123 (174)
347 PRK05579 bifunctional phosphop 96.9 0.0038 8.2E-08 64.0 8.8 73 9-100 187-279 (399)
348 PF10727 Rossmann-like: Rossma 96.9 0.0025 5.5E-08 54.7 6.4 105 1-117 1-122 (127)
349 PF03446 NAD_binding_2: NAD bi 96.9 0.0027 5.8E-08 56.8 6.8 94 11-127 2-100 (163)
350 PRK13304 L-aspartate dehydroge 96.9 0.008 1.7E-07 58.2 10.6 101 11-132 2-107 (265)
351 PF02254 TrkA_N: TrkA-N domain 96.9 0.0078 1.7E-07 50.1 9.2 102 13-130 1-105 (116)
352 PRK06728 aspartate-semialdehyd 96.8 0.0042 9.2E-08 62.3 8.5 97 8-126 3-104 (347)
353 PRK08040 putative semialdehyde 96.8 0.002 4.3E-08 64.5 6.1 101 8-126 2-102 (336)
354 PRK09620 hypothetical protein; 96.8 0.0016 3.4E-08 61.8 4.8 80 10-101 3-100 (229)
355 TIGR02853 spore_dpaA dipicolin 96.8 0.0055 1.2E-07 60.1 8.7 91 10-122 151-241 (287)
356 PRK13940 glutamyl-tRNA reducta 96.8 0.0048 1E-07 63.5 8.7 72 10-98 181-252 (414)
357 PRK15116 sulfur acceptor prote 96.8 0.011 2.4E-07 57.2 10.6 106 9-123 29-155 (268)
358 PRK05690 molybdopterin biosynt 96.8 0.011 2.5E-07 56.5 10.4 102 9-120 31-153 (245)
359 PRK00066 ldh L-lactate dehydro 96.8 0.027 5.8E-07 56.0 13.4 82 8-102 4-87 (315)
360 PF01113 DapB_N: Dihydrodipico 96.8 0.0058 1.3E-07 52.2 7.5 106 11-132 1-110 (124)
361 KOG0747 Putative NAD+-dependen 96.7 0.0023 5.1E-08 61.5 5.3 105 11-124 7-134 (331)
362 TIGR02355 moeB molybdopterin s 96.7 0.013 2.7E-07 56.0 10.4 103 10-121 24-146 (240)
363 TIGR01759 MalateDH-SF1 malate 96.7 0.014 3E-07 58.3 10.7 90 9-102 2-93 (323)
364 PRK08328 hypothetical protein; 96.7 0.014 3.1E-07 55.3 10.4 102 10-121 27-150 (231)
365 PRK05597 molybdopterin biosynt 96.6 0.013 2.9E-07 59.1 10.6 102 9-120 27-149 (355)
366 TIGR01758 MDH_euk_cyt malate d 96.6 0.015 3.2E-07 58.1 10.7 86 12-101 1-88 (324)
367 PRK07877 hypothetical protein; 96.6 0.0087 1.9E-07 65.6 9.7 107 9-124 106-231 (722)
368 PRK09496 trkA potassium transp 96.6 0.015 3.3E-07 60.3 11.1 92 10-115 231-323 (453)
369 cd01485 E1-1_like Ubiquitin ac 96.6 0.015 3.3E-07 53.8 9.9 103 10-121 19-145 (198)
370 PRK00045 hemA glutamyl-tRNA re 96.6 0.014 3.1E-07 60.3 10.6 94 10-121 182-280 (423)
371 PRK05600 thiamine biosynthesis 96.6 0.016 3.6E-07 58.8 10.8 103 9-120 40-162 (370)
372 PRK07340 ornithine cyclodeamin 96.6 0.003 6.6E-08 62.4 5.3 100 11-129 126-225 (304)
373 PLN00203 glutamyl-tRNA reducta 96.6 0.021 4.4E-07 60.6 11.6 97 10-121 266-369 (519)
374 PRK08618 ornithine cyclodeamin 96.5 0.0078 1.7E-07 60.0 8.0 101 11-128 128-228 (325)
375 smart00859 Semialdhyde_dh Semi 96.5 0.0064 1.4E-07 51.4 6.3 98 12-125 1-103 (122)
376 PRK08306 dipicolinate synthase 96.5 0.012 2.5E-07 58.1 9.0 94 9-124 151-244 (296)
377 PRK13302 putative L-aspartate 96.5 0.028 6E-07 54.7 11.5 104 9-132 5-110 (271)
378 KOG1198 Zinc-binding oxidoredu 96.5 0.017 3.6E-07 58.3 10.0 102 7-124 155-260 (347)
379 PRK09310 aroDE bifunctional 3- 96.5 0.016 3.5E-07 60.9 10.3 70 9-98 331-400 (477)
380 COG1089 Gmd GDP-D-mannose dehy 96.5 0.0079 1.7E-07 58.0 7.2 82 12-100 4-90 (345)
381 PRK08655 prephenate dehydrogen 96.5 0.013 2.8E-07 61.0 9.3 91 11-123 1-94 (437)
382 TIGR01035 hemA glutamyl-tRNA r 96.5 0.025 5.4E-07 58.4 11.3 94 10-121 180-277 (417)
383 PRK14851 hypothetical protein; 96.4 0.019 4.2E-07 62.7 10.5 105 9-121 42-167 (679)
384 TIGR00872 gnd_rel 6-phosphoglu 96.4 0.045 9.7E-07 53.9 12.0 92 11-123 1-95 (298)
385 TIGR01915 npdG NADPH-dependent 96.4 0.019 4E-07 53.9 9.0 78 11-99 1-79 (219)
386 PRK06300 enoyl-(acyl carrier p 96.4 0.009 2E-07 58.9 7.1 33 11-50 9-43 (299)
387 PF02571 CbiJ: Precorrin-6x re 96.3 0.016 3.4E-07 55.6 8.5 96 11-120 1-99 (249)
388 cd00755 YgdL_like Family of ac 96.3 0.021 4.6E-07 54.2 9.2 103 10-122 11-135 (231)
389 PLN02520 bifunctional 3-dehydr 96.3 0.022 4.7E-07 60.7 10.2 70 11-99 380-450 (529)
390 KOG1431 GDP-L-fucose synthetas 96.3 0.011 2.3E-07 55.4 6.8 85 11-121 2-105 (315)
391 cd05291 HicDH_like L-2-hydroxy 96.3 0.06 1.3E-06 53.2 12.6 77 12-101 2-81 (306)
392 PRK04148 hypothetical protein; 96.3 0.033 7.2E-07 48.2 9.3 98 9-125 16-115 (134)
393 cd01492 Aos1_SUMO Ubiquitin ac 96.3 0.026 5.5E-07 52.3 9.2 101 10-121 21-142 (197)
394 cd00650 LDH_MDH_like NAD-depen 96.2 0.029 6.3E-07 54.1 9.6 83 13-101 1-83 (263)
395 PRK06598 aspartate-semialdehyd 96.2 0.017 3.7E-07 58.4 8.0 100 11-126 2-103 (369)
396 PRK08300 acetaldehyde dehydrog 96.2 0.034 7.4E-07 54.7 9.8 98 9-124 3-104 (302)
397 cd01337 MDH_glyoxysomal_mitoch 96.2 0.032 7E-07 55.3 9.8 82 11-102 1-82 (310)
398 COG1712 Predicted dinucleotide 96.1 0.024 5.1E-07 53.0 8.0 101 11-131 1-105 (255)
399 PRK08057 cobalt-precorrin-6x r 96.1 0.033 7.2E-07 53.4 9.2 94 11-121 3-99 (248)
400 cd01484 E1-2_like Ubiquitin ac 96.1 0.041 8.9E-07 52.3 9.7 101 12-120 1-122 (234)
401 PRK07878 molybdopterin biosynt 96.1 0.035 7.5E-07 56.9 9.9 102 9-120 41-163 (392)
402 PRK10669 putative cation:proto 96.1 0.033 7.1E-07 59.7 10.0 72 11-97 418-490 (558)
403 PLN02602 lactate dehydrogenase 96.0 0.17 3.7E-06 51.0 14.5 82 9-102 36-119 (350)
404 cd05294 LDH-like_MDH_nadp A la 96.0 0.054 1.2E-06 53.7 10.7 80 11-99 1-83 (309)
405 PRK14852 hypothetical protein; 96.0 0.037 8E-07 62.1 10.4 103 9-120 331-455 (989)
406 cd01489 Uba2_SUMO Ubiquitin ac 96.0 0.038 8.2E-07 54.8 9.5 102 12-121 1-122 (312)
407 COG2085 Predicted dinucleotide 96.0 0.039 8.5E-07 51.2 8.9 89 12-121 2-93 (211)
408 PLN00112 malate dehydrogenase 96.0 0.055 1.2E-06 56.1 10.8 92 7-103 97-191 (444)
409 PRK12490 6-phosphogluconate de 96.0 0.077 1.7E-06 52.2 11.4 102 11-132 1-106 (299)
410 PRK05442 malate dehydrogenase; 96.0 0.034 7.4E-07 55.5 9.0 87 8-101 2-93 (326)
411 PRK07411 hypothetical protein; 96.0 0.038 8.2E-07 56.6 9.5 101 10-119 38-158 (390)
412 cd01338 MDH_choloroplast_like 96.0 0.03 6.5E-07 55.8 8.5 91 9-103 1-93 (322)
413 PRK12550 shikimate 5-dehydroge 95.9 0.056 1.2E-06 52.6 10.1 44 11-61 123-166 (272)
414 cd05293 LDH_1 A subgroup of L- 95.9 0.12 2.5E-06 51.4 12.2 82 10-102 3-85 (312)
415 COG1064 AdhP Zn-dependent alco 95.9 0.067 1.5E-06 53.4 10.4 88 11-116 168-255 (339)
416 PRK08291 ectoine utilization p 95.9 0.025 5.4E-07 56.6 7.5 102 11-129 133-235 (330)
417 TIGR02992 ectoine_eutC ectoine 95.8 0.009 1.9E-07 59.6 4.3 101 11-128 130-231 (326)
418 PRK04207 glyceraldehyde-3-phos 95.8 0.052 1.1E-06 54.6 9.7 104 11-123 2-111 (341)
419 TIGR02114 coaB_strep phosphopa 95.8 0.015 3.3E-07 55.0 5.6 67 13-99 18-91 (227)
420 TIGR01505 tartro_sem_red 2-hyd 95.8 0.055 1.2E-06 52.9 9.6 97 12-131 1-104 (291)
421 PRK03659 glutathione-regulated 95.8 0.081 1.8E-06 57.3 11.7 106 10-131 400-508 (601)
422 TIGR00521 coaBC_dfp phosphopan 95.7 0.036 7.7E-07 56.7 8.2 73 10-101 185-278 (390)
423 PF01210 NAD_Gly3P_dh_N: NAD-d 95.7 0.047 1E-06 48.4 8.0 96 12-121 1-103 (157)
424 PRK06153 hypothetical protein; 95.7 0.059 1.3E-06 54.7 9.4 100 10-120 176-297 (393)
425 PRK09599 6-phosphogluconate de 95.7 0.12 2.7E-06 50.8 11.6 41 11-59 1-41 (301)
426 PRK00094 gpsA NAD(P)H-dependen 95.7 0.045 9.8E-07 54.0 8.5 79 11-98 2-81 (325)
427 TIGR01757 Malate-DH_plant mala 95.7 0.11 2.4E-06 53.0 11.3 92 7-102 41-134 (387)
428 PRK15461 NADH-dependent gamma- 95.6 0.085 1.8E-06 51.9 10.2 98 12-132 3-107 (296)
429 cd05311 NAD_bind_2_malic_enz N 95.6 0.068 1.5E-06 50.5 8.9 94 9-121 24-128 (226)
430 PRK05447 1-deoxy-D-xylulose 5- 95.6 0.12 2.7E-06 52.4 11.2 110 12-132 3-159 (385)
431 PRK06223 malate dehydrogenase; 95.5 0.032 6.9E-07 55.0 6.9 81 11-103 3-85 (307)
432 PRK03562 glutathione-regulated 95.5 0.052 1.1E-06 59.0 9.0 89 10-114 400-489 (621)
433 PF01408 GFO_IDH_MocA: Oxidore 95.5 0.093 2E-06 43.7 8.8 101 11-132 1-107 (120)
434 cd01080 NAD_bind_m-THF_DH_Cycl 95.5 0.045 9.7E-07 49.4 7.2 74 9-121 43-116 (168)
435 PRK06141 ornithine cyclodeamin 95.5 0.035 7.5E-07 55.1 6.9 101 11-129 126-227 (314)
436 PRK12428 3-alpha-hydroxysteroi 95.4 0.016 3.5E-07 54.8 4.1 55 26-99 1-59 (241)
437 PRK11559 garR tartronate semia 95.4 0.12 2.5E-06 50.7 10.3 98 11-131 3-107 (296)
438 KOG0023 Alcohol dehydrogenase, 95.4 0.089 1.9E-06 51.8 9.1 93 9-115 181-274 (360)
439 COG0604 Qor NADPH:quinone redu 95.3 0.074 1.6E-06 53.1 8.7 74 10-98 143-221 (326)
440 PLN02350 phosphogluconate dehy 95.3 0.17 3.6E-06 53.4 11.5 101 11-119 7-130 (493)
441 PTZ00142 6-phosphogluconate de 95.3 0.14 3E-06 53.8 10.8 100 12-119 3-124 (470)
442 TIGR02354 thiF_fam2 thiamine b 95.3 0.14 3E-06 47.5 9.7 80 9-96 20-118 (200)
443 cd08259 Zn_ADH5 Alcohol dehydr 95.3 0.17 3.7E-06 49.5 10.9 92 11-121 164-256 (332)
444 PF02670 DXP_reductoisom: 1-de 95.2 0.25 5.5E-06 42.5 10.4 45 13-62 1-47 (129)
445 cd05292 LDH_2 A subgroup of L- 95.2 0.12 2.6E-06 51.2 9.6 79 11-102 1-81 (308)
446 PRK07634 pyrroline-5-carboxyla 95.2 0.13 2.7E-06 48.8 9.5 74 9-100 3-78 (245)
447 TIGR01772 MDH_euk_gproteo mala 95.2 0.079 1.7E-06 52.6 8.3 81 12-102 1-81 (312)
448 cd01075 NAD_bind_Leu_Phe_Val_D 95.2 0.088 1.9E-06 48.8 8.1 93 9-126 27-119 (200)
449 PRK02472 murD UDP-N-acetylmura 95.2 0.11 2.4E-06 53.8 9.8 98 11-129 6-104 (447)
450 PTZ00117 malate dehydrogenase; 95.1 0.18 3.9E-06 50.2 10.7 82 9-102 4-87 (319)
451 cd08295 double_bond_reductase_ 95.1 0.1 2.2E-06 51.7 9.0 94 11-121 153-251 (338)
452 COG0623 FabI Enoyl-[acyl-carri 95.1 0.13 2.9E-06 48.3 8.9 80 11-99 7-95 (259)
453 COG2084 MmsB 3-hydroxyisobutyr 95.1 0.17 3.8E-06 49.4 10.1 99 12-132 2-107 (286)
454 TIGR03693 ocin_ThiF_like putat 95.0 0.11 2.4E-06 55.4 9.1 101 9-118 128-235 (637)
455 PLN03154 putative allyl alcoho 95.0 0.1 2.3E-06 52.2 8.7 74 11-98 160-238 (348)
456 cd01486 Apg7 Apg7 is an E1-lik 95.0 0.19 4.1E-06 49.5 10.0 99 12-119 1-138 (307)
457 TIGR01692 HIBADH 3-hydroxyisob 94.9 0.24 5.2E-06 48.4 10.8 60 18-98 3-62 (288)
458 cd08293 PTGR2 Prostaglandin re 94.9 0.14 3E-06 50.7 9.3 94 11-121 156-254 (345)
459 TIGR02371 ala_DH_arch alanine 94.9 0.075 1.6E-06 53.0 7.3 101 11-129 129-230 (325)
460 TIGR01761 thiaz-red thiazoliny 94.9 0.19 4.1E-06 50.6 10.2 91 9-118 2-94 (343)
461 PRK09424 pntA NAD(P) transhydr 94.9 0.25 5.4E-06 52.3 11.5 98 9-122 164-286 (509)
462 TIGR00561 pntA NAD(P) transhyd 94.9 0.18 3.9E-06 53.2 10.3 98 10-123 164-286 (511)
463 PRK06129 3-hydroxyacyl-CoA deh 94.9 0.048 1E-06 53.9 5.7 40 11-58 3-42 (308)
464 COG0039 Mdh Malate/lactate deh 94.8 0.12 2.7E-06 51.0 8.4 82 11-103 1-84 (313)
465 TIGR00036 dapB dihydrodipicoli 94.7 0.14 3E-06 49.7 8.3 94 11-119 2-97 (266)
466 TIGR00873 gnd 6-phosphoglucona 94.7 0.21 4.6E-06 52.4 10.2 41 12-60 1-41 (467)
467 PRK06476 pyrroline-5-carboxyla 94.7 0.14 3E-06 49.2 8.3 72 11-99 1-72 (258)
468 PRK11880 pyrroline-5-carboxyla 94.7 0.19 4E-06 48.4 9.2 71 11-99 3-73 (267)
469 cd05290 LDH_3 A subgroup of L- 94.6 0.17 3.7E-06 50.1 9.0 77 12-101 1-81 (307)
470 PRK01438 murD UDP-N-acetylmura 94.6 0.25 5.4E-06 51.8 10.7 100 10-131 16-116 (480)
471 PTZ00082 L-lactate dehydrogena 94.6 0.29 6.4E-06 48.8 10.6 83 7-101 3-87 (321)
472 PRK14618 NAD(P)H-dependent gly 94.5 0.14 3.1E-06 50.9 8.2 77 10-99 4-85 (328)
473 COG2099 CobK Precorrin-6x redu 94.5 0.13 2.9E-06 48.9 7.4 95 10-120 2-99 (257)
474 PF02826 2-Hacid_dh_C: D-isome 94.5 0.15 3.2E-06 46.2 7.7 66 9-97 35-100 (178)
475 PRK06823 ornithine cyclodeamin 94.5 0.11 2.4E-06 51.6 7.3 101 11-129 129-230 (315)
476 TIGR03736 PRTRC_ThiF PRTRC sys 94.5 0.3 6.5E-06 46.7 9.9 99 8-112 9-129 (244)
477 PRK07680 late competence prote 94.5 0.16 3.4E-06 49.3 8.2 94 11-122 1-97 (273)
478 TIGR02825 B4_12hDH leukotriene 94.4 0.17 3.6E-06 49.9 8.4 93 11-121 140-237 (325)
479 PRK07417 arogenate dehydrogena 94.3 0.17 3.8E-06 49.1 8.2 67 11-98 1-67 (279)
480 PRK07589 ornithine cyclodeamin 94.3 0.14 2.9E-06 51.7 7.6 103 11-129 130-233 (346)
481 PF01262 AlaDh_PNT_C: Alanine 94.3 0.15 3.4E-06 45.6 7.3 73 9-96 19-110 (168)
482 PRK13301 putative L-aspartate 94.3 0.46 9.9E-06 45.9 10.7 100 11-132 3-108 (267)
483 PRK12491 pyrroline-5-carboxyla 94.3 0.19 4.2E-06 48.8 8.4 73 11-100 3-75 (272)
484 PRK06046 alanine dehydrogenase 94.3 0.12 2.6E-06 51.6 7.1 101 11-129 130-231 (326)
485 cd05295 MDH_like Malate dehydr 94.3 0.23 5E-06 51.6 9.3 90 7-103 120-214 (452)
486 PRK09260 3-hydroxybutyryl-CoA 94.3 0.042 9.1E-07 53.7 3.8 78 12-97 3-90 (288)
487 TIGR03215 ac_ald_DH_ac acetald 94.3 0.28 6.1E-06 48.0 9.4 93 11-124 2-98 (285)
488 COG0686 Ald Alanine dehydrogen 94.3 0.14 3.1E-06 50.2 7.2 72 10-96 168-239 (371)
489 COG1004 Ugd Predicted UDP-gluc 94.1 0.13 2.9E-06 52.0 6.9 85 11-103 1-92 (414)
490 COG0136 Asd Aspartate-semialde 94.1 0.13 2.8E-06 51.1 6.7 99 11-125 2-101 (334)
491 cd00300 LDH_like L-lactate deh 94.1 0.68 1.5E-05 45.6 11.8 76 13-100 1-78 (300)
492 COG0673 MviM Predicted dehydro 94.1 0.36 7.9E-06 47.8 10.1 106 9-132 2-112 (342)
493 cd05276 p53_inducible_oxidored 94.0 0.53 1.1E-05 45.2 10.8 94 10-121 140-238 (323)
494 PRK15059 tartronate semialdehy 93.9 0.42 9.2E-06 46.9 10.1 98 11-132 1-105 (292)
495 PRK08293 3-hydroxybutyryl-CoA 93.9 0.048 1E-06 53.3 3.4 79 11-97 4-93 (287)
496 TIGR01763 MalateDH_bact malate 93.9 0.46 1E-05 47.0 10.3 78 11-100 2-81 (305)
497 PRK07502 cyclohexadienyl dehyd 93.9 0.28 6E-06 48.4 8.7 71 11-99 7-77 (307)
498 KOG1494 NAD-dependent malate d 93.8 0.09 1.9E-06 50.7 4.8 87 6-102 24-110 (345)
499 PRK13303 L-aspartate dehydroge 93.8 0.36 7.8E-06 46.7 9.2 90 11-121 2-92 (265)
500 PRK14192 bifunctional 5,10-met 93.8 0.19 4E-06 49.2 7.2 73 10-121 159-231 (283)
No 1
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=100.00 E-value=7e-86 Score=630.96 Aligned_cols=381 Identities=41% Similarity=0.702 Sum_probs=334.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+||+||+|||||||+.+++++.+.+. ..+++|++||||++||+++++++... +.....++.+|.+|+++|++++
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~---~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQV---FEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhc---ccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence 79999999999999999999999542 12389999999999999999988652 2233449999999999999999
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH--------------hccCCCCCcceeeee-----
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA--------------RQWIPPAVPNQIEAY----- 147 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~--------------~~~~~~~~p~~~~~~----- 147 (420)
+++.+||||+|||..+|++||+||+++|+||||+||||+|+|+|+. ..++.||+|.|+.+.
T Consensus 82 k~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDlGv~f~~k~ 161 (423)
T KOG2733|consen 82 KQARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADLGVMFLRKN 161 (423)
T ss_pred hhhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccceeeeehhh
Confidence 9999999999999999999999999999999999999999999998 355667888887653
Q ss_pred -----------eeecc-CCc-cccccccHHHHHHHHhcchhhHHHHhcCCCCCCCCCCCCCCCCCCccccccccCeEEee
Q 014694 148 -----------VSLES-DKR-IVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWAIK 214 (420)
Q Consensus 148 -----------~~~~~-~~~-~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 214 (420)
+.++. +++ .+-|.|||+|+++++++.+++++||++..|..++.. .|+.++++.++..+..+.|++|
T Consensus 162 fdg~ln~VEsfl~Lh~~gp~G~sln~gTweSallg~~n~~~l~~lR~~~~p~~ip~~-~~~lkkR~~l~~~~e~~g~alp 240 (423)
T KOG2733|consen 162 FDGVLNHVESFLQLHSKGPSGYSLNTGTWESALLGVANASELKALRKSIMPQPIPNG-CPPLKKRPTLWKIKEKGGVALP 240 (423)
T ss_pred ccccHHHHHHHHhhhccCCcccccccccHHHHHHHhcChHHHHHHHhhhCCCcCccC-CCCCCCCCceeeeeeccceEee
Confidence 33443 332 345779999999999999999999999877666543 3445667777777778899999
Q ss_pred CCCCChhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhhcCCCCeEEEEEEecCchhHHHHHHHHHHHHHHhhccchhh
Q 014694 215 LPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRFIILGISIGLLSGLSFGR 294 (420)
Q Consensus 215 f~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 294 (420)
|+++|.+||+|||.+++.. ...+|.||+.|++++++++++.+++++.++.++++|+++|
T Consensus 241 FpgaD~SVV~RSQ~~l~~~---------------------~~~rPv~~~ay~~~~s~~~~~~~~~~~~~~~~fskf~~gR 299 (423)
T KOG2733|consen 241 FPGADKSVVRRSQYYLYES---------------------RKVRPVHMQAYITVGSRFGAIKLVFFGWILGFFSKFSFGR 299 (423)
T ss_pred cCCCchhheehHHHHHHHh---------------------ccCCceeEEEEEeeccchHHHHHHHHHHHHHHHHhhhHHH
Confidence 9999999999999887543 2567999999999999999999999999999999999999
Q ss_pred HhhhhcCcccccCccCCCCCCHhhhcccEEEEEEEEEecCCCcccc-cCCCCCCcEEEEEEecCCCcchHHHHHHHHHHH
Q 014694 295 WLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVS-QGNAKPDMEIITRVTGPEIGYIATPIILMQCAL 373 (420)
Q Consensus 295 ~ll~k~p~~fs~g~~~g~GPs~~~~~~~~f~~~~~~~g~~~~~~~~-~~~~~~~~~v~~~~~g~dpgY~~Ta~~l~eaAl 373 (420)
|||+|||.+||+|+|+.+|||++||++..|+++|+|+||.+.+..+ +++.++++++.++++||||||.+|++++++|||
T Consensus 300 ~lLlkyP~~fSfg~fsksGPSe~qm~~AtFt~~f~g~Gy~~~~~l~~~~~~~~~~kl~~~~sGPd~gYiaT~i~vlsaal 379 (423)
T KOG2733|consen 300 RLLLKYPDFFSFGMFSKSGPSEEQMEEATFTMWFFGYGYKEGEPLDKQHEQKTDKKLLVRCSGPDPGYIATSICVLSAAL 379 (423)
T ss_pred HHHHhCcccccccccccCCCCHHHHhhcEEEEEEEEeccCCCCccccccccccccEEEEEecCCCcchhhccHHHHHHHH
Confidence 9999999999999999999999999999999999999998755433 334456799999999999999999999999999
Q ss_pred HHhhccCCCC-CCccccccccccCcchHHHHhhCCcEEEEeeC
Q 014694 374 IVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVISK 415 (420)
Q Consensus 374 ~Ll~~~~~l~-~GGvlTPa~afg~~~li~RL~~~G~~f~v~~~ 415 (420)
+||.++++|| .|||||||+|||+|+++|||+++||+||++++
T Consensus 380 t~L~~~~~lpk~GGV~tPaaaF~~T~i~~~L~~~GI~Fel~s~ 422 (423)
T KOG2733|consen 380 TLLKDKDKLPKGGGVYTPAAAFGNTKIIDRLAKHGIKFELISE 422 (423)
T ss_pred HHHHHhhcCCCCCCccCchhhhcCChHHHHHHhcCceEEEEeC
Confidence 9999999999 79999999999999999999999999999864
No 2
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.7e-47 Score=363.16 Aligned_cols=335 Identities=27% Similarity=0.406 Sum_probs=246.0
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++++++|+|||||+|.+++++|++++ .+-++++||..|+..+...|+. + +-..++-+++.++++
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~~g-------~~~aLAgRs~~kl~~l~~~LG~----~--~~~~p~~~p~~~~~~ 68 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAREG-------LTAALAGRSSAKLDALRASLGP----E--AAVFPLGVPAALEAM 68 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHHcC-------CchhhccCCHHHHHHHHHhcCc----c--ccccCCCCHHHHHHH
Confidence 46789999999999999999999999998 5679999999999999999863 2 233345569999999
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHHh--------------ccCCCCCcceeeeee---
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEAR--------------QWIPPAVPNQIEAYV--- 148 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~~--------------~~~~~~~p~~~~~~~--- 148 (420)
+.+++||+||+|||..+++++++||+.+|+||+|||||+.|+|.++++ .++.|++|.|+..|-
T Consensus 69 ~~~~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~ 148 (382)
T COG3268 69 ASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLK 148 (382)
T ss_pred HhcceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999982 345689999984322
Q ss_pred ---------------eec--cCCccccccccHHHHHHHHhcchhhHHHHhc-CCCCCCCCCCCC--CCCCCCcccccccc
Q 014694 149 ---------------SLE--SDKRIVGNFGTYESAVLGVANAQELQKLRRS-RPRRARPVIPGP--APLRGPLVESQKRI 208 (420)
Q Consensus 149 ---------------~~~--~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~ 208 (420)
.+. ....+|+ ||.+|.+..+.......+-++. ..|+.+...... --|.+...+..+.+
T Consensus 149 ~~~~d~~~~~~~t~l~l~s~t~~g~S~--GTaat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~ 226 (382)
T COG3268 149 QALPDGTEELIATHLALGSFTGSGISG--GTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTL 226 (382)
T ss_pred hhCcccccchhhhheeeeecccCCccc--ccHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCccc
Confidence 121 1223555 9999999999877654433333 245544322110 00111111112223
Q ss_pred CeEEeeC--CCCChhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhhcCCCCeEEEEEEecCchhHH-HHHHHHHHHHH
Q 014694 209 GLWAIKL--PSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDI-FRFIILGISIG 285 (420)
Q Consensus 209 ~~~~~pf--~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~y~~y~~~~~~~~~-~~~~~~~~~~~ 285 (420)
. | +| ...|+.||.||+.+.. |.+ .+..+.+ ...+...+.+.
T Consensus 227 ~-W--g~V~a~~~t~iv~rsn~l~~----------------------~~~-----------~~pv~~~a~~~~~~~~~ll 270 (382)
T COG3268 227 P-W--GFVAAAFNTTIVPRSNALEV----------------------WIY-----------AAPVLALAGRGIGALLPLL 270 (382)
T ss_pred C-c--hhhhhhhccCccccccceee----------------------eec-----------hhHHHHHHHhccchhhhhh
Confidence 3 6 55 5899999999997731 111 1111111 11111111111
Q ss_pred --HhhccchhhHhhhhc-CcccccCccCCCCCCHhhhcccEEEEEEEEEecCCCcccccCCCCCCcEEEEEEecCCCcch
Q 014694 286 --LLSGLSFGRWLLLKF-PSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYI 362 (420)
Q Consensus 286 --~~~~~~~~R~ll~k~-p~~fs~g~~~g~GPs~~~~~~~~f~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~g~dpgY~ 362 (420)
... --+.|+++.|+ |+ ||+||++|.++.|+++++++++...+ .+..+++..... |.
T Consensus 271 ~~~~~-~~~~r~lv~r~~~k-------~g~GPt~e~qarg~~~~~~~~~tatG------------~r~~ari~t~~~-y~ 329 (382)
T COG3268 271 GSAYV-RDLLRGLVLRVVPK-------PGTGPTEEAQARGRYTIEGETTTATG------------ERYTARITTDND-YY 329 (382)
T ss_pred hhHHH-hhhhHhhhheeccC-------CCCCCCHHHHhcCcceEEEEEEeccC------------CceeeEEecccc-hH
Confidence 111 24678888887 66 99999999999999999888876322 345678887744 99
Q ss_pred HHHHHHHHHHHHHhhccCCCC-CCccccccccccCcchHHHHhhCCcEEEEe
Q 014694 363 ATPIILMQCALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVI 413 (420)
Q Consensus 363 ~Ta~~l~eaAl~Ll~~~~~l~-~GGvlTPa~afg~~~li~RL~~~G~~f~v~ 413 (420)
.|++.++++|++++.+++++. .|||+|||++||. +||+||-.+|+.|++.
T Consensus 330 stav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG~-dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 330 STAVLLAQAALALALDRDKLSEPGGVLTPAAALGA-DLVERLPGAGVTFGTT 380 (382)
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCcccChHHHHhH-HHHHhcccccceeecc
Confidence 999999999999999999887 8999999999997 8999999999999874
No 3
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=99.75 E-value=4.9e-18 Score=172.73 Aligned_cols=105 Identities=30% Similarity=0.534 Sum_probs=84.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
|+|+|| |++|+.++++|+++.+ . +|++++||.++++++.+++. ..+++++.+|+.|.++|.++++++|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~------~~~v~va~r~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP------FEEVTVADRNPEKAERLAEKLL---GDRVEAVQVDVNDPESLAELLRGCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC------E-EEEEEESSHHHHHHHHT--T---TTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC------CCcEEEEECCHHHHHHHHhhcc---ccceeEEEEecCCHHHHHHHHhcCCE
Confidence 799999 9999999999999873 4 99999999999998887642 46789999999999999999999999
Q ss_pred eEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
||||+||+ ++.+++++|+++|+||||.+.....+.+
T Consensus 71 Vin~~gp~--~~~~v~~~~i~~g~~yvD~~~~~~~~~~ 106 (386)
T PF03435_consen 71 VINCAGPF--FGEPVARACIEAGVHYVDTSYVTEEMLA 106 (386)
T ss_dssp EEE-SSGG--GHHHHHHHHHHHT-EEEESS-HHHHHHH
T ss_pred EEECCccc--hhHHHHHHHHHhCCCeeccchhHHHHHH
Confidence 99999998 6789999999999999997663333333
No 4
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.41 E-value=1.6e-12 Score=127.09 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=87.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH--HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ--ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~--~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..+.|+|+|||||||++|++.|+++| ++|....|++++.+. .+.++.. ...++.++++|+.|++++++++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG-------Y~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG-------YTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC-------CEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHH
Confidence 44689999999999999999999999 999999999887443 3455532 2345899999999999999999
Q ss_pred hccCeeEeccCCCCCCc---------------HHHHHHHHHcC-Cc-EEecCC
Q 014694 87 SQTKLLLNCVGPYRLHG---------------DPVAAACVHSG-CD-YLDISG 122 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~---------------~~vv~Ac~~~g-~~-yvdisg 122 (420)
++||.|||+|.|+.... .+|++||++.. ++ .|..|.
T Consensus 77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS 129 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSS 129 (327)
T ss_pred hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEecc
Confidence 99999999999976532 78999999998 54 444443
No 5
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.41 E-value=1.6e-12 Score=130.51 Aligned_cols=107 Identities=21% Similarity=0.345 Sum_probs=93.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+|| |++|+.+++.|+++++ .+|.+++|+.++++++.+... .+++.+++|+.|.+++.+++++.|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d------~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD------GEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHhcCC
Confidence 57999999 9999999999999984 799999999999988876542 478999999999999999999999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~ 130 (420)
+||||+.|+.. ..+++||+++|+||+|+|-..+...++
T Consensus 71 ~VIn~~p~~~~--~~i~ka~i~~gv~yvDts~~~~~~~~~ 108 (389)
T COG1748 71 LVINAAPPFVD--LTILKACIKTGVDYVDTSYYEEPPWKL 108 (389)
T ss_pred EEEEeCCchhh--HHHHHHHHHhCCCEEEcccCCchhhhh
Confidence 99999988764 599999999999999999555443333
No 6
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.29 E-value=2.6e-11 Score=120.03 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=81.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+..|+.++...+. ..+++++.+|++|++++.++++++|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g-------~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl~d~~~l~~al~g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG-------YQVRCLVRNLRKASFLK-------EWGAELVYGDLSLPETLPPSFKGVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcChHHhhhHh-------hcCCEEEECCCCCHHHHHHHHCCCC
Confidence 579999999999999999999987 89999999977653322 1357899999999999999999999
Q ss_pred eeEeccCCCCCC-----------cHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~-----------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||+++..... ..++++||.++|+ ++|.+|+
T Consensus 67 ~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 67 AIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred EEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 999998743211 1689999999998 6777765
No 7
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.25 E-value=3.6e-11 Score=108.89 Aligned_cols=94 Identities=20% Similarity=0.415 Sum_probs=81.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|+|+||||++|+.++++|++++ ++|.+..|++++++. ..+++++.+|+.|++++.+.++++|+|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-------~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-------HEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCC-------CEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchh
Confidence 7999999999999999999998 899999999998865 147899999999999999999999999
Q ss_pred EeccCCCCCC---cHHHHHHHHHcCC-cEEecCC
Q 014694 93 LNCVGPYRLH---GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 93 In~aGp~~~~---~~~vv~Ac~~~g~-~yvdisg 122 (420)
|+++|+.... -.+++++|.++++ +++.+|+
T Consensus 65 i~~~~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 65 IHAAGPPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp EECCHSTTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhhhhhhcccccccccccccccccccccceeeec
Confidence 9999875432 3678888888888 5666653
No 8
>PLN02427 UDP-apiose/xylose synthase
Probab=99.22 E-value=7e-11 Score=120.09 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=83.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
...+|+|+|+|||||+|++++++|++++. ++|.+++|+.++.+.+..........+++++.+|+.|.+.+.+++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 84 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI 84 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence 44567899999999999999999999741 689889998777654432110001236889999999999999999
Q ss_pred hccCeeEeccCCCCC-----C-----------cHHHHHHHHHcCCcEEecCCc
Q 014694 87 SQTKLLLNCVGPYRL-----H-----------GDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~~yvdisge 123 (420)
+++|+|||+|+.... . ..+++++|.+.+.++|.+|..
T Consensus 85 ~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~ 137 (386)
T PLN02427 85 KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 137 (386)
T ss_pred hcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeee
Confidence 999999999984321 0 156778888777777777653
No 9
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.16 E-value=1.2e-10 Score=113.71 Aligned_cols=100 Identities=26% Similarity=0.331 Sum_probs=77.0
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|||||+||+|++|+++|+++++ ..+|.+++|+..... ..... .....++.+|++|++++.++++++|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-----~~~Vr~~d~~~~~~~~~~~~~-----~~~~~~~~~Di~d~~~l~~a~~g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-----IYEVRVLDRSPPPKFLKDLQK-----SGVKEYIQGDITDPESLEEALEGVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-----ceEEEEcccccccccchhhhc-----ccceeEEEeccccHHHHHHHhcCCceE
Confidence 6999999999999999999983 268888888765421 11111 122338999999999999999999999
Q ss_pred EeccCCCCCCc---------------HHHHHHHHHcCCc-EEecCCc
Q 014694 93 LNCVGPYRLHG---------------DPVAAACVHSGCD-YLDISGE 123 (420)
Q Consensus 93 In~aGp~~~~~---------------~~vv~Ac~~~g~~-yvdisge 123 (420)
||+|++....+ ++|+++|.+++++ +|.+|..
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~ 117 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSI 117 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 99999754321 8899999999996 5555533
No 10
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.15 E-value=1.6e-10 Score=110.64 Aligned_cols=85 Identities=21% Similarity=0.264 Sum_probs=74.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+...++|||||+.||+.+++.|++++ +++++++|++++|+++.+++......++.++.+|++|++++.++..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g-------~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRG-------YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHH
Confidence 44579999999999999999999998 8999999999999999998863223467899999999999999875
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
.+|++|||||.-.
T Consensus 78 l~~~~~~IdvLVNNAG~g~ 96 (265)
T COG0300 78 LKERGGPIDVLVNNAGFGT 96 (265)
T ss_pred HHhcCCcccEEEECCCcCC
Confidence 5899999999543
No 11
>PLN02214 cinnamoyl-CoA reductase
Probab=99.14 E-value=4.6e-10 Score=112.43 Aligned_cols=106 Identities=18% Similarity=0.145 Sum_probs=82.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~-~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++ ++|.+.+|+.++... ....+.. ...++.++.+|++|.+++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERG-------YTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh
Confidence 44579999999999999999999988 789999998765322 1222210 11357788999999999999999
Q ss_pred ccCeeEeccCCCCCC-----------cHHHHHHHHHcCC-cEEecCC
Q 014694 88 QTKLLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~-----------~~~vv~Ac~~~g~-~yvdisg 122 (420)
++|+|||+|++.... ..+++++|.++++ ++|.+|.
T Consensus 81 ~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 81 GCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred cCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 999999999986432 2678899999887 4666654
No 12
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.10 E-value=6.3e-10 Score=109.71 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=80.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||+|++++++|++++ ++|.+.+|+.++.......... ....++.++.+|+.|++.+.+++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRG-------YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCC-------CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC
Confidence 3579999999999999999999987 7898889986653222111100 0123678899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHc-CC-cEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHS-GC-DYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~-g~-~yvdisge~ 124 (420)
+|+|||+|++.... ..+++++|.+. ++ ++|.+|.-.
T Consensus 77 ~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~ 129 (322)
T PLN02662 77 CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMA 129 (322)
T ss_pred CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHH
Confidence 99999999974321 15677888876 66 577766543
No 13
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.09 E-value=7.3e-10 Score=111.19 Aligned_cols=108 Identities=14% Similarity=0.114 Sum_probs=80.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh----CCCCCCCccEEEEeCCCHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA----SPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l----~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+.++|+|+|||||+|++++++|++++ ++|++.+|...........+ ......++.++.+|+.|.+++.+
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~ 86 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLN-------QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK 86 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence 34689999999999999999999987 78988888543322211111 10011357789999999999999
Q ss_pred HHhccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+++++|+|||+|+..... ..+++++|.+.++ ++|.+|..
T Consensus 87 ~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~ 142 (348)
T PRK15181 87 ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASS 142 (348)
T ss_pred HhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeech
Confidence 999999999999853210 1689999999998 67777653
No 14
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.09 E-value=9.9e-10 Score=115.48 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=85.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--------CCCCCccEEEEeCCCHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SHSLSIPILTADTTDPPS 81 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--------~~~~~~~~i~~D~~d~~s 81 (420)
...|+|+||+|+||++++++|++.+ ++|++++|+.++++.+.+.+.. ....++.++.+|+.|.++
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G-------~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3469999999999999999999988 7999999999998776654421 001357889999999999
Q ss_pred HHHHHhccCeeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCC
Q 014694 82 LHRLCSQTKLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+.+.+.++|+||||+|..... ..+++++|.+.|+ ++|.+|.
T Consensus 153 I~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 153 IGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 999999999999999964210 2678899999887 6777764
No 15
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.08 E-value=9e-10 Score=110.07 Aligned_cols=108 Identities=15% Similarity=0.172 Sum_probs=78.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+|+|||||||+|++++++|++.+ ++|.+++|+.++ ++.+.+........++.++.+|++|.+++.+++
T Consensus 2 ~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 2 IALITGITGQDGSYLAEFLLEKG-------YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRII 74 (343)
T ss_pred eEEEEcCCCcHHHHHHHHHHHCC-------CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHH
Confidence 69999999999999999999987 789999987542 222221110001235788999999999999999
Q ss_pred hc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC----cEEecCCcHHH
Q 014694 87 SQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC----DYLDISGEPEF 126 (420)
Q Consensus 87 ~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~----~yvdisge~~~ 126 (420)
++ +|+|||+|+..... ..+++++|.++++ ++|.+|....+
T Consensus 75 ~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vy 136 (343)
T TIGR01472 75 DEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELY 136 (343)
T ss_pred HhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhh
Confidence 85 59999999964211 1578888888775 56777654433
No 16
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.08 E-value=1.1e-09 Score=108.37 Aligned_cols=107 Identities=16% Similarity=0.165 Sum_probs=79.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||+|++++++|++++ ++|.+..|+.++.+.+.+.... ....++.++.+|++|++++.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRG-------YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC
Confidence 3579999999999999999999987 7899889987654433221110 0123678899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHc-CC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHS-GC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~-g~-~yvdisge 123 (420)
+|+|||+|++.... ..+++++|.++ ++ ++|.+|.-
T Consensus 78 ~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~ 129 (322)
T PLN02986 78 CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST 129 (322)
T ss_pred CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence 99999999975311 14566777764 45 56666543
No 17
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.07 E-value=1.4e-09 Score=109.14 Aligned_cols=86 Identities=14% Similarity=0.189 Sum_probs=71.7
Q ss_pred CCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 5 ~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.+.+..++|+|+||+||+|++++++|++++ ++|++.+|+.++.+.+...+. ...++.++.+|+.|.+.+.+
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~ 75 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRG-------YTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEGSFDE 75 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHHHHHH
Confidence 344556789999999999999999999987 789988999877666655442 12457789999999999999
Q ss_pred HHhccCeeEeccCCC
Q 014694 85 LCSQTKLLLNCVGPY 99 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (420)
+++++|+|||+|+..
T Consensus 76 ~~~~~d~Vih~A~~~ 90 (353)
T PLN02896 76 AVKGCDGVFHVAASM 90 (353)
T ss_pred HHcCCCEEEECCccc
Confidence 999999999999964
No 18
>PLN02650 dihydroflavonol-4-reductase
Probab=99.07 E-value=1.3e-09 Score=109.28 Aligned_cols=107 Identities=19% Similarity=0.228 Sum_probs=81.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|||||||++++++|++++ ++|.+.+|+.++...+...+... ...++.++.+|+.|.+.+++++++
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~ 77 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG 77 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCC-------CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC
Confidence 3479999999999999999999987 78999999876665443322110 112467899999999999999999
Q ss_pred cCeeEeccCCCCCC---------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH---------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~---------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+|+|||+|++.... ..+++++|.+.+ + ++|.+|..
T Consensus 78 ~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~ 129 (351)
T PLN02650 78 CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSA 129 (351)
T ss_pred CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecch
Confidence 99999999864211 156788888876 4 57777654
No 19
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.06 E-value=1.3e-09 Score=111.17 Aligned_cols=108 Identities=19% Similarity=0.329 Sum_probs=82.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~--~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
+...++|+|+|||||+|++++++|++++ ++|.+..|+.++++.. .+++. ....+++++.+|++|++++.+
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~-~~~~~v~~v~~Dl~d~~~l~~ 128 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRG-------YNVVAVAREKSGIRGKNGKEDTK-KELPGAEVVFGDVTDADSLRK 128 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEEechhhccccchhhHHh-hhcCCceEEEeeCCCHHHHHH
Confidence 4456789999999999999999999987 7899999988654211 11110 012467899999999999999
Q ss_pred HHh----ccCeeEeccCCCCC-----C------cHHHHHHHHHcCC-cEEecCC
Q 014694 85 LCS----QTKLLLNCVGPYRL-----H------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 85 ~~~----~~dvVIn~aGp~~~-----~------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+++ ++|+||||+|+... + ..+++++|.+.|+ ++|.+|.
T Consensus 129 ~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 129 VLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred HHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 998 58999999985321 1 2678999999998 5777764
No 20
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.05 E-value=9.5e-10 Score=110.06 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=79.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~-d~~sl~~~~~~~ 89 (420)
|+|+|+|||||+|++++++|++++. ++|.+.+|+.++...+.. ..+++++.+|+. +.+.+.++++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~------~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD------WEVYGMDMQTDRLGDLVN------HPRMHFFEGDITINKEWIEYHVKKC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC------CeEEEEeCcHHHHHHhcc------CCCeEEEeCCCCCCHHHHHHHHcCC
Confidence 4799999999999999999998631 789989998765433221 235788999997 778888999999
Q ss_pred CeeEeccCCCCC-----C-----------cHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRL-----H-----------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+|||+++.... . ..+++++|.+.+.++|.+|...
T Consensus 70 d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~ 120 (347)
T PRK11908 70 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSE 120 (347)
T ss_pred CEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecce
Confidence 999999984321 0 1578999999888888887643
No 21
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.04 E-value=2.1e-09 Score=107.13 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=65.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH--HHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL--QWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~--~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|+|+||+||+|++++++|++++ ++|.+..|+.+...... ..+. ...++.++.+|++|.+++.+++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~ 78 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKG-------YAVNTTVRDPENQKKIAHLRALQ--ELGDLKIFGADLTDEESFEAPI 78 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCCCCHHHHHHHHhcC--CCCceEEEEcCCCChHHHHHHH
Confidence 35679999999999999999999987 78888888765443222 1221 1235778999999999999999
Q ss_pred hccCeeEeccCCC
Q 014694 87 SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (420)
+++|+|||+|++.
T Consensus 79 ~~~d~vih~A~~~ 91 (338)
T PLN00198 79 AGCDLVFHVATPV 91 (338)
T ss_pred hcCCEEEEeCCCC
Confidence 9999999999964
No 22
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.04 E-value=2.5e-09 Score=106.31 Aligned_cols=104 Identities=17% Similarity=0.262 Sum_probs=80.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||+||+|++++++|++++. ..+|.+.+|+..+...+.+.+. ..++.++.+|++|.+++.++++++|
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~~iD 76 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALRGVD 76 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHhcCC
Confidence 5799999999999999999999852 1578889998776655544442 2357889999999999999999999
Q ss_pred eeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCC
Q 014694 91 LLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+|||+||..... ..+++++|.++++ ++|.+|.
T Consensus 77 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS 125 (324)
T TIGR03589 77 YVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALST 125 (324)
T ss_pred EEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 999999964211 1567778887776 5666654
No 23
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.00 E-value=6.3e-10 Score=107.94 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=77.1
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHHHHh
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHRLCS 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~----~i~~D~~d~~sl~~~~~ 87 (420)
|+||||+|.||+.+|++|++.+| .++++.+|++.++-.+..++.. ....++. .+.+|+.|.+.+.++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 79999999999999999999985 6899999999999888888731 0122343 34789999999999999
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+.|+|+|+|+.=+.. ..+++++|.++++ ++|.+|.+
T Consensus 75 ~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTD 129 (293)
T PF02719_consen 75 EYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTD 129 (293)
T ss_dssp --T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred hcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 899999999843311 2889999999999 58887744
No 24
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.00 E-value=6.5e-09 Score=97.51 Aligned_cols=81 Identities=21% Similarity=0.159 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.-++|+|||+.||..+++.|++.| ++|++++|+.++|+++.++++. ..+..+..|++|.+++++++.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G-------~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG-------AKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC-------CeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHH
Confidence 468999999999999999999998 8999999999999999998851 457788999999999777765
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.|++||+||-+..
T Consensus 77 ~~~g~iDiLvNNAGl~~g 94 (246)
T COG4221 77 EEFGRIDILVNNAGLALG 94 (246)
T ss_pred HhhCcccEEEecCCCCcC
Confidence 58999999997654
No 25
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.98 E-value=4.3e-09 Score=104.17 Aligned_cols=84 Identities=18% Similarity=0.197 Sum_probs=66.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|+||+||||++++++|++++ ++|.+..|+.++.+.....+.. ....++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRG-------YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc
Confidence 34689999999999999999999987 7888888887665443222110 012357789999999999999999
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
++|+|||+||+.
T Consensus 77 ~~d~vih~A~~~ 88 (325)
T PLN02989 77 GCETVFHTASPV 88 (325)
T ss_pred CCCEEEEeCCCC
Confidence 999999999964
No 26
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.96 E-value=3.5e-09 Score=107.28 Aligned_cols=106 Identities=11% Similarity=0.032 Sum_probs=81.5
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+..+++|+|+|||||+|++++++|.+++ ++|.+++|..... .... .....++.+|+.|.+.+.++
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G-------~~V~~v~r~~~~~---~~~~----~~~~~~~~~Dl~d~~~~~~~ 82 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEG-------HYIIASDWKKNEH---MSED----MFCHEFHLVDLRVMENCLKV 82 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCC-------CEEEEEEeccccc---cccc----cccceEEECCCCCHHHHHHH
Confidence 35677899999999999999999999987 7899999864321 1100 11346788999999999999
Q ss_pred HhccCeeEeccCCCCC-----------------CcHHHHHHHHHcCC-cEEecCCcHH
Q 014694 86 CSQTKLLLNCVGPYRL-----------------HGDPVAAACVHSGC-DYLDISGEPE 125 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~-----------------~~~~vv~Ac~~~g~-~yvdisge~~ 125 (420)
++++|+|||+|+.... ...+++++|.+.++ ++|.+|....
T Consensus 83 ~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~v 140 (370)
T PLN02695 83 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACI 140 (370)
T ss_pred HhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhh
Confidence 9999999999975421 02678999999998 6877776443
No 27
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.96 E-value=2.5e-09 Score=103.96 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=77.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~----- 86 (420)
+|+|+||||++|++++++|++.+ ++|.++.|+.++.. ..++..+.+|++|++++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g-------~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~ 63 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS-------VPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDG 63 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC-------CcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccC
Confidence 48999999999999999999987 78999999987642 124667789999999999998
Q ss_pred -hc-cCeeEeccCCCCC---CcHHHHHHHHHcCC-cEEecCC
Q 014694 87 -SQ-TKLLLNCVGPYRL---HGDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 87 -~~-~dvVIn~aGp~~~---~~~~vv~Ac~~~g~-~yvdisg 122 (420)
++ +|.|++++++... ...+++++|+++|+ |+|.+|.
T Consensus 64 ~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 64 MEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred cCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 56 9999999886432 24688999999998 5666653
No 28
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.95 E-value=6.5e-09 Score=98.10 Aligned_cols=95 Identities=25% Similarity=0.297 Sum_probs=74.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
|+|+||||.+|+.+++.|++.+ ++|.+..|+..+. ...++. ..++++.+|+.|+++|.++++++|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~-------~~V~~l~R~~~~~~~~~l~~------~g~~vv~~d~~~~~~l~~al~g~d~ 67 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG-------FSVRALVRDPSSDRAQQLQA------LGAEVVEADYDDPESLVAALKGVDA 67 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------GCEEEEESSSHHHHHHHHHH------TTTEEEES-TT-HHHHHHHHTTCSE
T ss_pred CEEECCccHHHHHHHHHHHhCC-------CCcEEEEeccchhhhhhhhc------ccceEeecccCCHHHHHHHHcCCce
Confidence 7999999999999999999965 8999999987542 112222 2568899999999999999999999
Q ss_pred eEeccCCCCC----CcHHHHHHHHHcCCcEEec
Q 014694 92 LLNCVGPYRL----HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 92 VIn~aGp~~~----~~~~vv~Ac~~~g~~yvdi 120 (420)
||++.++... ...++++||+++|++++-.
T Consensus 68 v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 68 VFSVTPPSHPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp EEEESSCSCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred EEeecCcchhhhhhhhhhHHHhhhccccceEEE
Confidence 9999986532 3589999999999954433
No 29
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.95 E-value=3e-09 Score=115.69 Aligned_cols=106 Identities=15% Similarity=0.130 Sum_probs=81.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s-l~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++. ++|++.+|+..+..... ...+++++.+|++|.++ ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g------~~V~~l~r~~~~~~~~~------~~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDN------YEVYGLDIGSDAISRFL------GHPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCC------cEEEEEeCCchhhhhhc------CCCceEEEeccccCcHHHHHHHhc
Confidence 556899999999999999999998631 79999999876543221 12357889999998665 677889
Q ss_pred ccCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+|+.... + ..+++++|.+++.++|.+|....+
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vy 436 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVY 436 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhc
Confidence 99999999984321 0 267899999999888888875433
No 30
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.93 E-value=4e-09 Score=103.90 Aligned_cols=99 Identities=25% Similarity=0.405 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||+||+|+++++.|++++ ++|.+.+|+.++...+ . ..++.++.+|+.|.+++.++++++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~----~---~~~~~~~~~D~~~~~~l~~~~~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG-------EEVRVLVRPTSDRRNL----E---GLDVEIVEGDLRDPASLRKAVAGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC-------CEEEEEEecCcccccc----c---cCCceEEEeeCCCHHHHHHHHhCCC
Confidence 469999999999999999999987 7899999987664321 1 2357889999999999999999999
Q ss_pred eeEeccCCCCCC--------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~--------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+++..... ..+++++|.+.++ ++|.+|..
T Consensus 67 ~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~ 114 (328)
T TIGR03466 67 ALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSV 114 (328)
T ss_pred EEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEech
Confidence 999999864321 1567788888776 56666654
No 31
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.92 E-value=1.5e-08 Score=96.30 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=67.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|.|+|+||||++|..++++|++++ ++|++.+|+.++++.+.+.++ .++.++.+|+.|.+++.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~i~~~~~~~~ 69 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLP 69 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----cceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999998887766553 367889999999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 70 ~~~~~id~vi~~ag~~ 85 (248)
T PRK10538 70 AEWRNIDVLVNNAGLA 85 (248)
T ss_pred HHcCCCCEEEECCCcc
Confidence 589999999864
No 32
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.92 E-value=1.1e-08 Score=97.50 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|++++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|++|.+++++++++
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAG-------AAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKVA 79 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888877776642 223567789999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
+|+||||+|...
T Consensus 80 ~~~~~~d~vi~~ag~~~ 96 (262)
T PRK13394 80 ERFGSVDILVSNAGIQI 96 (262)
T ss_pred HHcCCCCEEEECCccCC
Confidence 799999999753
No 33
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.91 E-value=3.3e-09 Score=100.76 Aligned_cols=102 Identities=20% Similarity=0.366 Sum_probs=80.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.-..|+|||||+|+.++..|++.| -+++|--|..+---.-++-++ +..++-+...|+.|+++++++++...
T Consensus 62 iVaTVFGAtGFlGryvvnklak~G-------SQviiPyR~d~~~~r~lkvmG--dLGQvl~~~fd~~DedSIr~vvk~sN 132 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMG-------SQVIIPYRGDEYDPRHLKVMG--DLGQVLFMKFDLRDEDSIRAVVKHSN 132 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcC-------CeEEEeccCCccchhheeecc--cccceeeeccCCCCHHHHHHHHHhCc
Confidence 357899999999999999999998 689998885432111112222 23578889999999999999999999
Q ss_pred eeEeccCCCCCC------------cHHHHHHHHHcCC-cEEecC
Q 014694 91 LLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~Ac~~~g~-~yvdis 121 (420)
||||..|--... .+.+.+.|.+.|+ +||++|
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS 176 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS 176 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence 999999953221 3889999999999 799876
No 34
>PLN02686 cinnamoyl-CoA reductase
Probab=98.91 E-value=9.8e-09 Score=103.93 Aligned_cols=106 Identities=20% Similarity=0.154 Sum_probs=79.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-C----CCCCccEEEEeCCCHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-S----HSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~----~~~~~~~i~~D~~d~~sl~ 83 (420)
...+|+|+||+||+|++++++|++++ ++|.+..|+.++++.+. ++.. . ...++.++.+|++|.+++.
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G-------~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~ 123 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHG-------YSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLH 123 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHH
Confidence 44589999999999999999999998 78988889877665542 2210 0 0124678899999999999
Q ss_pred HHHhccCeeEeccCCCCCC----------------cHHHHHHHHHc-CCc-EEecCC
Q 014694 84 RLCSQTKLLLNCVGPYRLH----------------GDPVAAACVHS-GCD-YLDISG 122 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~-g~~-yvdisg 122 (420)
++++++|.|||+++..... ..+++++|.+. +++ +|.+|.
T Consensus 124 ~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS 180 (367)
T PLN02686 124 EAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSS 180 (367)
T ss_pred HHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEecc
Confidence 9999999999999864211 15688888875 564 555554
No 35
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.90 E-value=1.1e-08 Score=101.57 Aligned_cols=106 Identities=11% Similarity=0.120 Sum_probs=75.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||||+|++++++|++++ ++|++.+|...........+......++.++.+|++|.+++.++++ +
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 73 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHA 73 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCC
Confidence 579999999999999999999987 7888887643222221111110012346778999999999999887 5
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+|||++|..... ..+++++|.++++ ++|.+|.-
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 125 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSA 125 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH
Confidence 89999999854311 1567888888887 46666653
No 36
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.90 E-value=1.9e-08 Score=96.19 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=64.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHH-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLC- 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~- 86 (420)
+.++|+|+||||++|+.++++|++++ ++|.+..|+.++++.... ...++.++.+|++| .+++.+.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~l~~~~~ 83 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKG-------FAVKAGVRDVDKAKTSLP-----QDPSLQIVRADVTEGSDKLVEAIG 83 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCC-------CEEEEEecCHHHHHHhcc-----cCCceEEEEeeCCCCHHHHHHHhh
Confidence 45689999999999999999999987 789989999887654332 12357889999998 47787777
Q ss_pred hccCeeEeccCCC
Q 014694 87 SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (420)
.++|+||+++|..
T Consensus 84 ~~~d~vi~~~g~~ 96 (251)
T PLN00141 84 DDSDAVICATGFR 96 (251)
T ss_pred cCCCEEEECCCCC
Confidence 6899999998863
No 37
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.90 E-value=6.8e-09 Score=107.45 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=74.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|+|+|+|||||||++++++|++++ ++|++.+|.......-...+. ...+++++..|+.+. .+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G-------~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~-----~~~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG-------DEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEP-----ILLE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCccHhHhhhhc--cCCceEEEECccccc-----cccC
Confidence 45899999999999999999999987 789988885322111111111 123567777887654 3468
Q ss_pred cCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+|+|||+|++... . ..+++++|.++++++|.+|....+
T Consensus 185 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VY 238 (436)
T PLN02166 185 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVY 238 (436)
T ss_pred CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHh
Confidence 9999999985321 0 278999999999999988775544
No 38
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.90 E-value=1e-08 Score=98.54 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+||+||||+++|.+|++.+ ++|++.+.-...-.+.+... ..+++++|+.|.+.|+++++ +
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G-------~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~~~ 67 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG-------HEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEENK 67 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC-------CeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHhcC
Confidence 579999999999999999999988 89999997433222222221 16899999999999999998 5
Q ss_pred cCeeEeccCCCCC----------C------cHHHHHHHHHcCCc-EEecCC
Q 014694 89 TKLLLNCVGPYRL----------H------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~----------~------~~~vv~Ac~~~g~~-yvdisg 122 (420)
.|.|||+||--.. | ...++++|.++|+. +|..|.
T Consensus 68 idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSSt 118 (329)
T COG1087 68 IDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSST 118 (329)
T ss_pred CCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecc
Confidence 8999999994332 1 17789999999985 555543
No 39
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.1e-08 Score=105.74 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=90.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...|+||||+|-+|+.+|+++++.+| -++++.+|++-++..+..++... ...++..+.+|+.|.+.+.+++.+
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc
Confidence 44799999999999999999999975 68999999999998888877531 135677899999999999999998
Q ss_pred --cCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 89 --TKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 89 --~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|+|+|+|+--+.. .+++++||.++|+ ++|-+|.+
T Consensus 324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD 377 (588)
T COG1086 324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD 377 (588)
T ss_pred CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC
Confidence 99999999843321 2899999999999 57777643
No 40
>PLN02583 cinnamoyl-CoA reductase
Probab=98.89 E-value=2.2e-08 Score=98.31 Aligned_cols=107 Identities=18% Similarity=0.201 Sum_probs=79.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...|+|+|||||+|++++++|++++ ++|++..|+.+ ++...+..+.. ...++.++.+|++|.+++.+++.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG-------YTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc
Confidence 3479999999999999999999988 89999999643 33333343321 12357889999999999999999
Q ss_pred ccCeeEeccCCCCCC--------------cHHHHHHHHHc-CC-cEEecCCcH
Q 014694 88 QTKLLLNCVGPYRLH--------------GDPVAAACVHS-GC-DYLDISGEP 124 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~-g~-~yvdisge~ 124 (420)
+++.|+|++++.... ..+++++|.+. ++ +.|.+|...
T Consensus 78 ~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~ 130 (297)
T PLN02583 78 GCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130 (297)
T ss_pred CCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence 999999988764321 26778888876 34 566666543
No 41
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.89 E-value=8.1e-09 Score=96.68 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=77.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--C
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT--K 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~--d 90 (420)
|+|+|||||+|++++++|++++ ..|+...|+.........+ .++.++.+|+.|.+.++++++.. |
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d 67 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-------HEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANID 67 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------TEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTES
T ss_pred EEEEccCCHHHHHHHHHHHHcC-------Ccccccccccccccccccc------ceEEEEEeeccccccccccccccCce
Confidence 7999999999999999999998 6777777765544222221 15789999999999999999977 9
Q ss_pred eeEeccCCCCC-----C-----------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRL-----H-----------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~-----~-----------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||+++.... . ..+++++|.+.++ +++.++..
T Consensus 68 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~ 117 (236)
T PF01370_consen 68 VVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA 117 (236)
T ss_dssp EEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG
T ss_pred EEEEeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999997521 0 2778889998888 67777653
No 42
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.88 E-value=1.3e-08 Score=101.91 Aligned_cols=103 Identities=14% Similarity=0.188 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|||||+|+++++.|++++ .+|.+.+|+........+.+. ...++.++.+|++|.+++.++++.
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELG-------AEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFK 75 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCC-------CEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcC
Confidence 579999999999999999999987 789888998765443333332 123567889999999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcC-C-cEEecCC
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISG 122 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g-~-~yvdisg 122 (420)
+|+|||++|..... ..+++++|.+.+ . ++|.+|.
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS 127 (349)
T TIGR02622 76 PEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS 127 (349)
T ss_pred CCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 59999999843210 156677777665 3 4666654
No 43
>PRK06182 short chain dehydrogenase; Validated
Probab=98.88 E-value=2.9e-08 Score=95.78 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.+ .++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQG-------YTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 799999999988765532 247789999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 70 ~~~~~id~li~~ag~~~ 86 (273)
T PRK06182 70 AEEGRIDVLVNNAGYGS 86 (273)
T ss_pred HhcCCCCEEEECCCcCC
Confidence 6799999999643
No 44
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.4e-08 Score=96.36 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ .+|.+..|+.++++.+.+... .++.++.+|++|.+++.++++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 71 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG-------DRVAATVRRPDALDDLKARYG----DRLWVLQLDVTDSAAVRAVVDRAF 71 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhcc----CceEEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999987 789999999988877766542 467889999999999988875
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (276)
T PRK06482 72 AALGRIDVVVSNAGYGL 88 (276)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 3799999999654
No 45
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.87 E-value=7e-09 Score=101.92 Aligned_cols=89 Identities=16% Similarity=0.223 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+||+||+|++++++|++++ +|.+.+|... .+.+|++|.+.+.++++ +
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~ 54 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHST------------------DYCGDFSNPEGVAETVRKIR 54 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccccc------------------cccCCCCCHHHHHHHHHhcC
Confidence 479999999999999999998875 3666676421 23579999999999998 5
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
+|+|||||+..... ..+++++|.+.|+++|.+|....
T Consensus 55 ~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~V 107 (299)
T PRK09987 55 PDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYV 107 (299)
T ss_pred CCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceE
Confidence 89999999975321 15788999999988888876443
No 46
>PRK12320 hypothetical protein; Provisional
Probab=98.87 E-value=1e-08 Score=110.76 Aligned_cols=94 Identities=17% Similarity=0.254 Sum_probs=76.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++.+ ++|.+.+|+.... ...+++++.+|+.|+. +.+++.++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G-------~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG-------HTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCC
Confidence 479999999999999999999987 7899999875432 1235788999999984 788889999
Q ss_pred eeEeccCCCCCC--------cHHHHHHHHHcCCcEEecCC
Q 014694 91 LLLNCVGPYRLH--------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~--------~~~vv~Ac~~~g~~yvdisg 122 (420)
+|||++++.... ..+++++|.++|++.|.+|+
T Consensus 63 ~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS 102 (699)
T PRK12320 63 AVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQ 102 (699)
T ss_pred EEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 999999864211 26789999999998887774
No 47
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.87 E-value=2.3e-08 Score=94.58 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=69.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..+++|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++.. ..++.++.+|+.|++++.+++++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEG-------ARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999988 7899999999888877776641 24577899999999999988764
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~~~~~~d~vi~~ag~~ 92 (251)
T PRK07231 76 LERFGSVDILVNNAGTT 92 (251)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 59999999964
No 48
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.87 E-value=1.3e-08 Score=101.56 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=75.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
.++|+|+|||||+|++++++|++.+ ++|.+++|+.+. ++.+..... ....++.++.+|+.|.+++.+
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKG-------YEVHGIIRRSSNFNTQRLDHIYIDPH-PNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCC-------CEEEEEecccccccccchhhhccccc-cccCceEEEEecCCCHHHHHH
Confidence 3579999999999999999999988 789988886542 222211110 012357889999999999999
Q ss_pred HHhc--cCeeEeccCCCCCC----------------cHHHHHHHHHcCC------cEEecCC
Q 014694 85 LCSQ--TKLLLNCVGPYRLH----------------GDPVAAACVHSGC------DYLDISG 122 (420)
Q Consensus 85 ~~~~--~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~------~yvdisg 122 (420)
+++. +|+|||+|+..... ..+++++|.+.++ ++|.+|.
T Consensus 78 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss 139 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS 139 (340)
T ss_pred HHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence 9985 59999999964311 1556777777664 4555553
No 49
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.86 E-value=3.1e-08 Score=94.11 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++ ++|++.+|+.+++++..+++.. ...++.++.+|+.|++++.++++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEG-------AKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAV 76 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7999999999988777666531 13467789999999999988877
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 77 ~~~~~~d~vi~~a~~~~ 93 (258)
T PRK12429 77 ETFGGVDILVNNAGIQH 93 (258)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4799999999643
No 50
>PRK05717 oxidoreductase; Validated
Probab=98.86 E-value=1.4e-08 Score=96.93 Aligned_cols=88 Identities=11% Similarity=-0.022 Sum_probs=70.6
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
|.++.-......++|+||+|++|+.++++|++++ .+|++.+|+.++.+++.++++ .++.++.+|++|.+
T Consensus 1 ~~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~ 69 (255)
T PRK05717 1 MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEG-------WQVVLADLDRERGSKVAKALG----ENAWFIAMDVADEA 69 (255)
T ss_pred CCCCCcccCCCEEEEeCCcchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHcC----CceEEEEccCCCHH
Confidence 5555444444579999999999999999999987 789999999888777666543 35678999999999
Q ss_pred HHHHHHh-------ccCeeEeccCCC
Q 014694 81 SLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~ 99 (420)
++.++++ ..|+|||++|..
T Consensus 70 ~~~~~~~~~~~~~g~id~li~~ag~~ 95 (255)
T PRK05717 70 QVAAGVAEVLGQFGRLDALVCNAAIA 95 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCcc
Confidence 8877654 369999999964
No 51
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=98.86 E-value=1.4e-08 Score=100.58 Aligned_cols=82 Identities=27% Similarity=0.208 Sum_probs=70.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||..+++.|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|.++++++++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRG-------WHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDF 77 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999999998888777642 123577899999999999988864
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||+||..
T Consensus 78 ~~~~~~iD~li~nAg~~ 94 (322)
T PRK07453 78 RALGKPLDALVCNAAVY 94 (322)
T ss_pred HHhCCCccEEEECCccc
Confidence 89999999964
No 52
>PLN02240 UDP-glucose 4-epimerase
Probab=98.84 E-value=2.6e-08 Score=99.48 Aligned_cols=105 Identities=12% Similarity=0.197 Sum_probs=77.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k----l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.+|+|+|||||+|++++++|++.+ ++|++.+|.... .+.+.+... ....++.++.+|++|++++.+++
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAG-------YKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHHH
Confidence 579999999999999999999987 788888875322 222222111 01235788999999999999998
Q ss_pred h--ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 87 S--QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 87 ~--~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+ ++|+||||+|..... ..+++++|.+.++ ++|.+|..
T Consensus 78 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 133 (352)
T PLN02240 78 ASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSA 133 (352)
T ss_pred HhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 7 689999999853211 1477889988886 57777764
No 53
>PRK06196 oxidoreductase; Provisional
Probab=98.84 E-value=3.6e-08 Score=97.48 Aligned_cols=77 Identities=18% Similarity=0.250 Sum_probs=67.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||||++|++++++|++++ ++|++++|+.++++++.+++. ++.++.+|++|.++++++++
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G-------~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~ 94 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAG-------AHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFL 94 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999998887776653 47789999999999988875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||+||..
T Consensus 95 ~~~~~iD~li~nAg~~ 110 (315)
T PRK06196 95 DSGRRIDILINNAGVM 110 (315)
T ss_pred hcCCCCCEEEECCCCC
Confidence 479999999964
No 54
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.84 E-value=3.5e-08 Score=95.10 Aligned_cols=78 Identities=21% Similarity=0.145 Sum_probs=66.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||||++|+.++++|++++ ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALG-------ARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999999887776653 46789999999999877665
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 74 ~~~~~id~li~~ag~~~ 90 (273)
T PRK07825 74 ADLGPIDVLVNNAGVMP 90 (273)
T ss_pred HHcCCCCEEEECCCcCC
Confidence 4699999999643
No 55
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.84 E-value=3.1e-08 Score=102.78 Aligned_cols=106 Identities=11% Similarity=0.042 Sum_probs=74.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---H--------------HHHHHHHhCCCCCCCccE
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---R--------------VKQALQWASPSHSLSIPI 71 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---k--------------l~~~~~~l~~~~~~~~~~ 71 (420)
+.++|+|+|||||||++++++|++++ ++|++++|... + .+.+ +.+......++.+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~v~~ 117 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRG-------YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV-RRWKEVSGKEIEL 117 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccccccchHHHH-HHHHHhhCCcceE
Confidence 34579999999999999999999987 78888764211 0 0011 1110001235789
Q ss_pred EEEeCCCHHHHHHHHhc--cCeeEeccCCCCC-------------C------cHHHHHHHHHcCC--cEEecCC
Q 014694 72 LTADTTDPPSLHRLCSQ--TKLLLNCVGPYRL-------------H------GDPVAAACVHSGC--DYLDISG 122 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~~--~dvVIn~aGp~~~-------------~------~~~vv~Ac~~~g~--~yvdisg 122 (420)
+.+|+.|.+.+.+++++ +|+|||+|+.... . ..+++++|.+.++ ++|.+|.
T Consensus 118 v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS 191 (442)
T PLN02572 118 YVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGT 191 (442)
T ss_pred EECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEec
Confidence 99999999999999984 8999999964210 0 1667888888875 5666654
No 56
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.84 E-value=1.4e-08 Score=105.34 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=74.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+.++|+|+|||||+|++++++|++++ ++|++.+|..... +.+...+. ..+++++.+|+.++ .+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G-------~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~-----~l~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG-------DSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEP-----ILL 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc-------CEEEEEeCCCccchhhhhhhcc---CCceEEEECCccCh-----hhc
Confidence 45789999999999999999999987 7888888753221 11211121 23567788888664 345
Q ss_pred ccCeeEeccCCCCC--C--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRL--H--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~--~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+|+.... + ..+++++|.++++++|.+|....+
T Consensus 183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VY 237 (442)
T PLN02206 183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 237 (442)
T ss_pred CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHh
Confidence 79999999985321 0 277899999999999988875544
No 57
>PRK06194 hypothetical protein; Provisional
Probab=98.84 E-value=1.4e-08 Score=98.49 Aligned_cols=82 Identities=21% Similarity=0.184 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||++++++|++++ ++|++++|+.+++++..+++.. ...++.++.+|++|.+++++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~ 78 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALG-------MKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAAL 78 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999998888877776631 123567799999999999998874
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||+||...
T Consensus 79 ~~~g~id~vi~~Ag~~~ 95 (287)
T PRK06194 79 ERFGAVHLLFNNAGVGA 95 (287)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 699999999754
No 58
>PRK09186 flagellin modification protein A; Provisional
Probab=98.83 E-value=1.7e-08 Score=95.93 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++... ....+.++.+|++|++++.+++++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAG-------GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999988 78999999999988877776321 122456779999999999998874
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
.|+||||+|+.
T Consensus 77 ~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 77 SAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred HHHHcCCccEEEECCccc
Confidence 79999999753
No 59
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.83 E-value=3.7e-08 Score=89.61 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=85.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+++|+|||||+|. +++.|++.+ ++|.+.+|+.++++.+...+. ...++.++.+|+.|++++.+++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G-------~~V~v~~R~~~~~~~l~~~l~--~~~~i~~~~~Dv~d~~sv~~~i~~~l 70 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG-------FHVSVIARREVKLENVKREST--TPESITPLPLDYHDDDALKLAIKSTI 70 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc-------CEEEEEECCHHHHHHHHHHhh--cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 57999999998876 999999987 899999999988877766553 134677888999999999998863
Q ss_pred -----cCeeEeccCCCCCCcHHHHHHHHHcCCc-----EEecCCcHHHHHH
Q 014694 89 -----TKLLLNCVGPYRLHGDPVAAACVHSGCD-----YLDISGEPEFMER 129 (420)
Q Consensus 89 -----~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-----yvdisge~~~~~~ 129 (420)
.|++|+.+-.. ...++.++|.+.|++ ++++-|....-.+
T Consensus 71 ~~~g~id~lv~~vh~~--~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~~ 119 (177)
T PRK08309 71 EKNGPFDLAVAWIHSS--AKDALSVVCRELDGSSETYRLFHVLGSAASDPR 119 (177)
T ss_pred HHcCCCeEEEEecccc--chhhHHHHHHHHccCCCCceEEEEeCCcCCchh
Confidence 46777776432 348999999999988 9999888775433
No 60
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.83 E-value=5.2e-08 Score=92.72 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=67.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-ccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~d 90 (420)
.|+|+||||++|+.++++|++.+ .+|++.+|+.++++++.+.... ...++.++.+|+.|++++.+++. +.|
T Consensus 4 ~vlVtGasg~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 4 TILITGAGSGFGREVALRLARKG-------HNVIAGVQIAPQVTALRAEAAR-RGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 69999999999999999999987 7899999998877666554321 12357889999999999999887 899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||||+|..
T Consensus 76 ~vi~~ag~~ 84 (257)
T PRK09291 76 VLLNNAGIG 84 (257)
T ss_pred EEEECCCcC
Confidence 999999964
No 61
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.83 E-value=1.9e-08 Score=95.08 Aligned_cols=83 Identities=10% Similarity=0.047 Sum_probs=69.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|++++++|++++ ++|++.+|+.++++...+++.. ...++.++.+|+.|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADG-------AEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999998887776665532 22357889999999999999886
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
.+|+|||++|...
T Consensus 78 ~~~~~~~d~vi~~ag~~~ 95 (251)
T PRK12826 78 VEDFGRLDILVANAGIFP 95 (251)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 5799999998754
No 62
>PRK05866 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2e-08 Score=98.44 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=69.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 41 k~vlItGasggIG~~la~~La~~G-------~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRG-------ATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7999999999998887766531 12356788999999999999887
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 113 ~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 113 KRIGGVDILINNAGRSI 129 (293)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999653
No 63
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.5e-08 Score=93.71 Aligned_cols=81 Identities=19% Similarity=0.154 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||||++|+.++++|++++ ++|++++|++++++++.+++.. ..++.++.+|+.|.+++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEG-------YKVAITARDQKELEEAAAELNN--KGNVLGLAADVRDEADVQRAVDAIV 77 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEeeCCHHHHHHHHHHHhc--cCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999887 7899999999988888777642 1467789999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
.+|+|||++|+..
T Consensus 78 ~~~~~~d~vi~~ag~~~ 94 (237)
T PRK07326 78 AAFGGLDVLIANAGVGH 94 (237)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999754
No 64
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.82 E-value=3.4e-08 Score=94.96 Aligned_cols=74 Identities=22% Similarity=0.233 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||||++|+.++++|++++ .+|++.+|+.++++. ..++.++.+|++|++++++++++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~ 68 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAG-------YRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVI 68 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHH
Confidence 469999999999999999999987 789999999776531 23578899999999999998875
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 69 ~~~g~~d~li~~ag~~~ 85 (270)
T PRK06179 69 ARAGRIDVLVNNAGVGL 85 (270)
T ss_pred HhCCCCCEEEECCCCCC
Confidence 599999999753
No 65
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.81 E-value=4.4e-08 Score=94.96 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=63.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++.+|+.++++++.+ ..+.++.+|++|+++++++++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G-------~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDG-------WRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999987 799999999988866543 246788999999998888765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 71 ~~~~g~id~li~~Ag~~ 87 (277)
T PRK05993 71 ELSGGRLDALFNNGAYG 87 (277)
T ss_pred HHcCCCccEEEECCCcC
Confidence 359999999864
No 66
>PRK07024 short chain dehydrogenase; Provisional
Probab=98.81 E-value=2.5e-08 Score=95.38 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ..++.++.+|++|++++.+++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQG-------ATLGLVARRTDALQAFAARLPK--AARVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhccc--CCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999998877776642 12678899999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 74 ~~~g~id~lv~~ag~~~ 90 (257)
T PRK07024 74 AAHGLPDVVIANAGISV 90 (257)
T ss_pred HhCCCCCEEEECCCcCC
Confidence 699999999643
No 67
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.80 E-value=3.3e-08 Score=96.65 Aligned_cols=104 Identities=14% Similarity=0.210 Sum_probs=74.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
+|+|+|||||+|++++++|+++++ ..+|.+.+|.. .+.+. .+.+. ...++.++.+|+.|++++.+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLEN-LADLE--DNPRYRFVKGDIGDRELVSRLFTEH 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhhh-hhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc
Confidence 489999999999999999998762 15787777632 12211 12221 123578899999999999999987
Q ss_pred -cCeeEeccCCCCCC----------------cHHHHHHHHHc--CCcEEecCCc
Q 014694 89 -TKLLLNCVGPYRLH----------------GDPVAAACVHS--GCDYLDISGE 123 (420)
Q Consensus 89 -~dvVIn~aGp~~~~----------------~~~vv~Ac~~~--g~~yvdisge 123 (420)
+|+|||+++..... ..+++++|.+. +.+++.+|..
T Consensus 73 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~ 126 (317)
T TIGR01181 73 QPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTD 126 (317)
T ss_pred CCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 89999999975421 14677888775 3467777653
No 68
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2.6e-08 Score=95.56 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=68.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|++|++++.++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAG-------ARVAIVDIDADNGAAVAASLG----ERARFIATDITDDAAIERAVATVV 75 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CeeEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 799999999988888777653 357789999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 76 ARFGRVDILVNLACTY 91 (261)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999964
No 69
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.80 E-value=6.1e-08 Score=93.35 Aligned_cols=81 Identities=21% Similarity=0.137 Sum_probs=68.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
+|+|+||||++|+.++++|++++ .+|++.+|+.++++.+.+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~ 73 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREG-------WRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999999988877766642 23457789999999999988776
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 74 ~~~~id~lI~~ag~~~ 89 (270)
T PRK05650 74 KWGGIDVIVNNAGVAS 89 (270)
T ss_pred HcCCCCEEEECCCCCC
Confidence 5799999999754
No 70
>PRK05854 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2.2e-08 Score=99.09 Aligned_cols=84 Identities=20% Similarity=0.164 Sum_probs=70.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...++|+|||++||+.++++|++++ .+|++++|+.+++++..+++... ...++.++.+|+.|.++++++++.
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G-------~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~ 86 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAG-------AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ 86 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999988 79999999999888877766321 123577899999999999988764
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|++||+||...
T Consensus 87 ~~~~~~~iD~li~nAG~~~ 105 (313)
T PRK05854 87 LRAEGRPIHLLINNAGVMT 105 (313)
T ss_pred HHHhCCCccEEEECCcccc
Confidence 799999999643
No 71
>PRK08267 short chain dehydrogenase; Provisional
Probab=98.80 E-value=2.3e-08 Score=95.62 Aligned_cols=79 Identities=15% Similarity=0.030 Sum_probs=68.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.++++|++++ .+|.+.+|+.++++++.+.+. ..++.++.+|++|.+++.+++++
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEG-------WRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 59999999999999999999988 789999999999888877653 34678999999999999888764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 73 ~~~~~id~vi~~ag~~~ 89 (260)
T PRK08267 73 ATGGRLDVLFNNAGILR 89 (260)
T ss_pred HcCCCCCEEEECCCCCC
Confidence 499999999643
No 72
>PLN02253 xanthoxin dehydrogenase
Probab=98.79 E-value=3.7e-08 Score=95.32 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=68.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ ++|++.+|+.++.+++.+++. ...++.++.+|++|+++++++++
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHG-------AKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHHH
Confidence 479999999999999999999988 799999999888877777664 23457889999999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 90 ~~~g~id~li~~Ag~~ 105 (280)
T PLN02253 90 DKFGTLDIMVNNAGLT 105 (280)
T ss_pred HHhCCCCEEEECCCcC
Confidence 589999999964
No 73
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.7e-08 Score=93.44 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++ ++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g-------~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 67 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG-------HKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFP 67 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHh
Confidence 469999999999999999999987 79999999999987776654 35688999999999998876
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|++||++|+.
T Consensus 68 ~~id~lv~~ag~~ 80 (223)
T PRK05884 68 HHLDTIVNVPAPS 80 (223)
T ss_pred hcCcEEEECCCcc
Confidence 479999999863
No 74
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.79 E-value=2.6e-08 Score=95.33 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|.+|+.++++|++++ ++|++.+|+++++++..+++.. ..++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG-------ARVVISSRNEENLEKALKELKE--YGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999998888777742 2357789999999999998875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 72 ~~~g~id~li~naG~~ 87 (259)
T PRK08340 72 ELLGGIDALVWNAGNV 87 (259)
T ss_pred HhcCCCCEEEECCCCC
Confidence 479999999964
No 75
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.79 E-value=3.2e-08 Score=94.33 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.+|+|+||+|++|+.++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|+.|++++++++++
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAG-------AEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999999888777776642 123577889999999999998864
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~d~li~~ag~~ 98 (255)
T PRK07523 83 AEIGPIDILVNNAGMQ 98 (255)
T ss_pred HhcCCCCEEEECCCCC
Confidence 69999999965
No 76
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.78 E-value=7.9e-08 Score=91.04 Aligned_cols=81 Identities=15% Similarity=0.052 Sum_probs=64.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.+ +++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAG-------AHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDTA 78 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 78988899753 45555554431 12356788999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 79 ~~~~~~~d~vi~~ag~~ 95 (248)
T PRK07806 79 REEFGGLDALVLNASGG 95 (248)
T ss_pred HHhCCCCcEEEECCCCC
Confidence 479999999864
No 77
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.6e-08 Score=95.48 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=66.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|++++++|++++ .+|++.+|+.++++.+.+.. ..++..+.+|++|++++.++++
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAG-------HRVVGTVRSEAARADFEALH----PDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCc-------CEEEEEeCCHHHHHHHHhhc----CCCeeEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 78999999998887665532 2357788999999999988877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 74 ~~~~~~d~vv~~ag~~ 89 (277)
T PRK06180 74 ATFGPIDVLVNNAGYG 89 (277)
T ss_pred HHhCCCCEEEECCCcc
Confidence 479999999974
No 78
>PRK07478 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.6e-08 Score=93.92 Aligned_cols=81 Identities=17% Similarity=0.147 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|+.|+++++++++
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREG-------AKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALAV 78 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999998888776642 12357788999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~li~~ag~~ 94 (254)
T PRK07478 79 ERFGGLDIAFNNAGTL 94 (254)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
No 79
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.2e-08 Score=95.31 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|+||+.++++|++++ ++|++.+|++++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAG-------ADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888777766531 12457789999999999988775
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 77 ~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 77 LERFGRVDALVNNAFRV 93 (258)
T ss_pred HHHcCCccEEEECCccC
Confidence 469999999864
No 80
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.78 E-value=7.6e-08 Score=89.61 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
++++|+||+|++|+.++++|+++ ++|.+.+|+.++++++.++. ..+.++.+|+.|++++.++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~--------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 70 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT--------HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLG 70 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh--------CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcC
Confidence 47999999999999999999986 36889999988876665543 257889999999999999887
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 71 ~id~vi~~ag~~~ 83 (227)
T PRK08219 71 RLDVLVHNAGVAD 83 (227)
T ss_pred CCCEEEECCCcCC
Confidence 4899999999754
No 81
>PRK05867 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.5e-08 Score=94.07 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=69.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAG-------AQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQVT 81 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999998888777642 12356788999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 82 ~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 82 AELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999754
No 82
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.78 E-value=2.3e-08 Score=96.71 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=83.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHHhc
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLCSQ 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s----l~~~~~~ 88 (420)
.+|+|||..||+..+++|+++| ++|.+++|+++||+++.+++......++.++.+|.++.+. +++.+.+
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG-------~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRG-------FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 7999999999999999999998 8999999999999999998864223457889999987664 6666666
Q ss_pred cC--eeEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHHHHHHHH
Q 014694 89 TK--LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEFMERMEA 132 (420)
Q Consensus 89 ~d--vVIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~~~~~~~ 132 (420)
.| ++|||+|....+.+...+.-...-.. -|.+.+.....+.++.
T Consensus 125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp 172 (312)
T KOG1014|consen 125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILP 172 (312)
T ss_pred CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhh
Confidence 55 69999998776655555443322123 4444454445454443
No 83
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.7e-08 Score=96.55 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.+++.|++++ ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G-------~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRG-------ARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 7899999999988887776642 123567789999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 79 ~~~g~id~li~nAg~~ 94 (275)
T PRK05876 79 RLLGHVDVVFSNAGIV 94 (275)
T ss_pred HHcCCCCEEEECCCcC
Confidence 69999999963
No 84
>PRK09135 pteridine reductase; Provisional
Probab=98.77 E-value=3.4e-08 Score=93.23 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=65.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+||+|++|++++++|++++ ++|++.+|+ .++++.+.+.+.......+.++.+|++|.+++.++++.
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAG-------YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAA 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999987 789999986 45555555444210123467889999999999988874
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
+|+|||++|..
T Consensus 79 ~~~~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 79 CVAAFGRLDALVNNASSF 96 (249)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 69999999964
No 85
>PRK07814 short chain dehydrogenase; Provisional
Probab=98.77 E-value=4.6e-08 Score=93.90 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|++++++|++++ ++|++++|+.++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAG-------ADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQA 81 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7999999999888777766531 12457788999999999988776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 82 ~~~~~~id~vi~~Ag~~ 98 (263)
T PRK07814 82 VEAFGRLDIVVNNVGGT 98 (263)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999863
No 86
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.76 E-value=4.9e-08 Score=106.36 Aligned_cols=107 Identities=14% Similarity=0.258 Sum_probs=79.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.++|+|+|||||||++++++|++++. .++|.+.+|.. ++++.+.... ...++.++.+|+.|.+.+.+++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~-----~~~V~~~d~~~~~~~~~~l~~~~---~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYP-----DYKIVVLDKLDYCSNLKNLNPSK---SSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCC-----CCEEEEEeCCCccchhhhhhhcc---cCCCeEEEECCCCChHHHHHHH
Confidence 456899999999999999999999852 17888888742 2332222111 1246788999999999888775
Q ss_pred --hccCeeEeccCCCCCC----------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 87 --SQTKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
.++|+|||+|+..... ..+++++|.+.+ + ++|.+|..
T Consensus 77 ~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~ 133 (668)
T PLN02260 77 ITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD 133 (668)
T ss_pred hhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcch
Confidence 5799999999975421 156899999987 4 68887753
No 87
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.2e-08 Score=92.92 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.+++|+||+|++|++++++|++++ .+|++.+|+.++++.+.+++.. ...++.++.+|++|.++++++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREG-------ASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADATV 78 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887776665531 12346678999999999888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~vi~~ag~~ 94 (250)
T PRK07774 79 SAFGGIDYLVNNAAIY 94 (250)
T ss_pred HHhCCCCEEEECCCCc
Confidence 469999999964
No 88
>PRK07454 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.6e-08 Score=92.35 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=68.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAG-------WDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888777665531 12457789999999999888776
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 79 ~~~~~id~lv~~ag~~~ 95 (241)
T PRK07454 79 EQFGCPDVLINNAGMAY 95 (241)
T ss_pred HHcCCCCEEEECCCccC
Confidence 4799999999653
No 89
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.76 E-value=3.4e-08 Score=98.92 Aligned_cols=79 Identities=15% Similarity=0.248 Sum_probs=58.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~k--l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+|+|+|||||+|+++++.|++++ ++ +++.+|...+ ...+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 3 ~vlVtGatGfIG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 72 (355)
T PRK10217 3 KILITGGAGFIGSALVRYIINET-------SDAVVVVDKLTYAGNLMSLA-PVA--QSERFAFEKVDICDRAELARVFTE 72 (355)
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC-------CCEEEEEecCccccchhhhh-hcc--cCCceEEEECCCcChHHHHHHHhh
Confidence 79999999999999999999987 44 4455554321 11111 111 123567889999999999999985
Q ss_pred --cCeeEeccCCCC
Q 014694 89 --TKLLLNCVGPYR 100 (420)
Q Consensus 89 --~dvVIn~aGp~~ 100 (420)
+|+||||||...
T Consensus 73 ~~~D~Vih~A~~~~ 86 (355)
T PRK10217 73 HQPDCVMHLAAESH 86 (355)
T ss_pred cCCCEEEECCcccC
Confidence 899999999753
No 90
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.2e-08 Score=97.97 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G-------~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRG-------ARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQAA 79 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999999888776642 23456778999999999999874
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++|||+|..
T Consensus 80 ~~~g~iD~lVnnAG~~ 95 (330)
T PRK06139 80 SFGGRIDVWVNNVGVG 95 (330)
T ss_pred HhcCCCCEEEECCCcC
Confidence 579999999953
No 91
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.75 E-value=4.7e-08 Score=106.05 Aligned_cols=102 Identities=17% Similarity=0.280 Sum_probs=74.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCH------HHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDP------PSL 82 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~------~sl 82 (420)
|+|+|+|||||+|++++++|+++.. ..+|.+.+|+.. +++.+..... ..+++++.+|+.|+ +.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~-----g~~V~~l~R~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~ 72 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR-----EATVHVLVRRQSLSRLEALAAYWG---ADRVVPLVGDLTEPGLGLSEADI 72 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC-----CCEEEEEECcchHHHHHHHHHhcC---CCcEEEEecccCCccCCcCHHHH
Confidence 4799999999999999999995321 178999999653 3333333221 24678899999984 466
Q ss_pred HHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecC
Q 014694 83 HRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdis 121 (420)
+++ +++|+||||||.+... ..+++++|.+.++ ++|.+|
T Consensus 73 ~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~S 124 (657)
T PRK07201 73 AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVS 124 (657)
T ss_pred HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEe
Confidence 666 8999999999965421 2678899999876 466655
No 92
>PRK05865 hypothetical protein; Provisional
Probab=98.75 E-value=5.3e-08 Score=107.35 Aligned_cols=96 Identities=17% Similarity=0.185 Sum_probs=78.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+|||||+|++++++|++++ ++|.+.+|+.... + ..++.++.+|+.|.+++.++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G-------~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG-------HEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHhCCC
Confidence 479999999999999999999987 7899999975321 1 1256789999999999999999999
Q ss_pred eeEeccCCCCCC-------cHHHHHHHHHcCC-cEEecCCc
Q 014694 91 LLLNCVGPYRLH-------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~-------~~~vv~Ac~~~g~-~yvdisge 123 (420)
+|||||+..... ..+++++|.++++ ++|.+|..
T Consensus 64 ~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 64 VVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred EEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 999999864321 2678999999987 67777754
No 93
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=98.75 E-value=6.5e-08 Score=92.73 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=68.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEG-------ARVAVLERSAEKLASLRQRFG----DHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 789999999999888776653 357789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 75 ~~~~g~id~li~~ag~~ 91 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIW 91 (263)
T ss_pred HHhcCCCCEEEECCCCc
Confidence 469999999974
No 94
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.75 E-value=7.9e-08 Score=92.23 Aligned_cols=106 Identities=16% Similarity=0.215 Sum_probs=79.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
++++|+||.||||+..+++++++.+. .+|+..+.- ..+++.+..-. ..++..++++|+.|.+.+.++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHh
Confidence 47999999999999999999998742 567776651 12332322211 24678999999999999999999
Q ss_pred -ccCeeEeccCCCCCC---------------c-HHHHHHHHHcCC--cEEecCCcH
Q 014694 88 -QTKLLLNCVGPYRLH---------------G-DPVAAACVHSGC--DYLDISGEP 124 (420)
Q Consensus 88 -~~dvVIn~aGp~~~~---------------~-~~vv~Ac~~~g~--~yvdisge~ 124 (420)
+.|+|+|.|+-.+.. | -++++|+.+... +|+++|-+-
T Consensus 73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDE 128 (340)
T COG1088 73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDE 128 (340)
T ss_pred cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccc
Confidence 589999999865532 1 677888888774 788887443
No 95
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.75 E-value=4.2e-08 Score=92.21 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=67.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+||+|++|+.++++|++++ ++|++.+|+.++++.+.+++.. ...++.++.+|+.|++++.+++++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADG-------AKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999887776665531 234677888999999999888764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
+|+|||++|..
T Consensus 78 ~~~~~id~vi~~ag~~ 93 (246)
T PRK05653 78 EAFGALDILVNNAGIT 93 (246)
T ss_pred HHhCCCCEEEECCCcC
Confidence 49999999864
No 96
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.74 E-value=5.9e-08 Score=92.61 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=68.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+++. .++.++.+|++|++++.++++
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEG-------ARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAAV 75 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998888777653 357788999999999998877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (257)
T PRK07067 76 ERFGGIDILFNNAALF 91 (257)
T ss_pred HHcCCCCEEEECCCcC
Confidence 479999999864
No 97
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.74 E-value=3.2e-08 Score=93.67 Aligned_cols=81 Identities=19% Similarity=0.235 Sum_probs=67.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
+++|+||||++|+.++++|++++ ++|++++|+.++++.+.+++......++.++.+|++|++++.++++.
T Consensus 3 ~vlItGas~giG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 3 KILIIGATSDIARACARRYAAAG-------ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA 75 (243)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh
Confidence 69999999999999999999987 78999999998887766655311134678899999999999888764
Q ss_pred -cCeeEeccCCC
Q 014694 89 -TKLLLNCVGPY 99 (420)
Q Consensus 89 -~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~d~vv~~ag~~ 87 (243)
T PRK07102 76 LPDIVLIAVGTL 87 (243)
T ss_pred cCCEEEECCcCC
Confidence 59999999864
No 98
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.74 E-value=5.2e-08 Score=92.31 Aligned_cols=80 Identities=14% Similarity=0.088 Sum_probs=68.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++...+++. ...++.++.+|++|++++.++++
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~ 76 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREG-------ARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 789999999988877766653 13457889999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~id~vi~~ag~~ 92 (252)
T PRK06138 77 ARWGRLDVLVNNAGFG 92 (252)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999964
No 99
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.74 E-value=4.9e-08 Score=92.06 Aligned_cols=82 Identities=21% Similarity=0.211 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEG-------VNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQLK 79 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7999999999888777666531 22357788999999999988886
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 80 ~~~~~id~vi~~ag~~~ 96 (239)
T PRK07666 80 NELGSIDILINNAGISK 96 (239)
T ss_pred HHcCCccEEEEcCcccc
Confidence 6899999999743
No 100
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.74 E-value=6.2e-08 Score=93.29 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|.||+.+++.|++++ ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAG-------ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 368999999999999999999998 7999999999998887776632112457789999999999999886
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 82 ~~g~iD~lv~nag~~ 96 (263)
T PRK08339 82 NIGEPDIFFFSTGGP 96 (263)
T ss_pred hhCCCcEEEECCCCC
Confidence 479999999964
No 101
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.73 E-value=6.9e-08 Score=94.72 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=74.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--cc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~~ 89 (420)
+|+|+||||++|+.+++.|++++ ++|.+.+|...........+. ...++.++.+|+.|++++.++++ +.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g-------~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG-------HEVVVLDNLSNGSPEALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC-------CeEEEEeCCCccchhhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCC
Confidence 58999999999999999999987 678777664322111122221 01246788899999999999987 68
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCC-cEEecCCc
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|+|||++|+.... ..+++++|.+.+. ++|.+|+.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~ 122 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSA 122 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecch
Confidence 9999999964221 1567788888876 56666653
No 102
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.73 E-value=6.7e-08 Score=91.88 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=66.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ .++++ ..|+.+++++..+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDG-------ALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 579999999999999999999987 67766 47888887777665531 12356788999999999988776
Q ss_pred -----------ccCeeEeccCCCC
Q 014694 88 -----------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----------~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 79 ~~~~~~~~~~~~id~vi~~ag~~~ 102 (254)
T PRK12746 79 KNELQIRVGTSEIDILVNNAGIGT 102 (254)
T ss_pred HHHhccccCCCCccEEEECCCCCC
Confidence 4799999999643
No 103
>PRK07063 short chain dehydrogenase; Provisional
Probab=98.72 E-value=6.4e-08 Score=92.54 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREG-------AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA 80 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78999999999988887776420 12356789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 81 ~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 81 EEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHhCCCcEEEECCCcC
Confidence 579999999964
No 104
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.72 E-value=6.9e-08 Score=92.14 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=68.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
+..+++|+||+|++|+.++++|++++ ++|.+++|+.+.++.+.++.. ..++.++.+|+.|++++.++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAG-------ARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999987 789999999888877766553 1256789999999999988775
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 80 AVERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 579999999975
No 105
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.72 E-value=7.5e-08 Score=91.65 Aligned_cols=83 Identities=19% Similarity=0.152 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||+|++|+++++.|++++ ++|++++|+.++++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAG-------AKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHA 80 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7899999999998877766531 12357789999999999999877
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 81 ~~~~~~~d~li~~ag~~~ 98 (258)
T PRK06949 81 ETEAGTIDILVNNSGVST 98 (258)
T ss_pred HHhcCCCCEEEECCCCCC
Confidence 4799999999643
No 106
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.72 E-value=8.5e-08 Score=92.77 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=66.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|.+++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAG-------FPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDSVKSFVAQAE 82 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887766655431 12356788899999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 83 ~~~~~id~vi~~Ag~~ 98 (274)
T PRK07775 83 EALGEIEVLVSGAGDT 98 (274)
T ss_pred HhcCCCCEEEECCCcC
Confidence 469999999964
No 107
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=98.71 E-value=1.4e-07 Score=105.64 Aligned_cols=116 Identities=18% Similarity=0.181 Sum_probs=92.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCC-------CCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFP-------SSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~-------~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s 81 (420)
+..+|+|+|| |++|+.++++|++..... ......|++++++.++++++.+.+ .++..+..|+.|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHH
Confidence 4568999997 999999999998864200 000134899999999888777654 256789999999999
Q ss_pred HHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+.++++++|+||+|..+. +...++++|+++|+||++.+...+-++.+.+
T Consensus 642 L~~~v~~~DaVIsalP~~--~H~~VAkaAieaGkHvv~eky~~~e~~~L~e 690 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPAS--CHAVVAKACIELKKHLVTASYVSEEMSALDS 690 (1042)
T ss_pred HHHhhcCCCEEEECCCch--hhHHHHHHHHHcCCCEEECcCCHHHHHHHHH
Confidence 999999999999999764 3489999999999999999977666666655
No 108
>PLN00016 RNA-binding protein; Provisional
Probab=98.71 E-value=2.5e-08 Score=101.26 Aligned_cols=102 Identities=22% Similarity=0.245 Sum_probs=76.7
Q ss_pred CcceEEEE----cCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH-------HHhCCCCCCCccEEEEeCC
Q 014694 9 ELFDVIIL----GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-------QWASPSHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~----GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~-------~~l~~~~~~~~~~i~~D~~ 77 (420)
..++|+|+ |||||+|++++++|++++ ++|.+..|+.++...+. .++. ..+++++.+|+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-------HEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDPA 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCC-------CEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecHH
Confidence 34579999 999999999999999987 89999999876532211 1111 124788999987
Q ss_pred CHHHHHHHH--hccCeeEeccCCCCCCcHHHHHHHHHcCC-cEEecCCc
Q 014694 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~-~yvdisge 123 (420)
| +.+++ .++|+|||+++.......+++++|.++|+ ++|.+|..
T Consensus 121 d---~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 121 D---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred H---HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 6 44444 47899999988654445899999999998 68877754
No 109
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.71 E-value=5.2e-08 Score=95.82 Aligned_cols=83 Identities=19% Similarity=0.129 Sum_probs=68.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|+||+|+||+.+++.|++++ .+|++++|+.+++++..+++.. ....++.++.+|+.|.++++++++
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 88 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAKG-------AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADA 88 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 7899999999887766655531 012356788999999999988876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||+||..
T Consensus 89 ~~~~~~~iD~li~nAg~~ 106 (306)
T PRK06197 89 LRAAYPRIDLLINNAGVM 106 (306)
T ss_pred HHhhCCCCCEEEECCccc
Confidence 479999999964
No 110
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.71 E-value=6.3e-08 Score=92.85 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=66.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++++|+.++++++.+.. ..++.++.+|+.|.+++.++++
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEG-------ARVAVLDKSAAGLQELEAAH----GDAVVGVEGDVRSLDDHKEAVARCV 74 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCceEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999998887765543 2357788999999998888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 75 ~~~g~id~li~~Ag~~ 90 (262)
T TIGR03325 75 AAFGKIDCLIPNAGIW 90 (262)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999964
No 111
>PRK08643 acetoin reductase; Validated
Probab=98.71 E-value=6.7e-08 Score=92.07 Aligned_cols=80 Identities=15% Similarity=0.112 Sum_probs=67.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+.++++++..++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGas~giG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 4 VALVTGAGQGIGFAIAKRLVEDG-------FKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999999888777766531 12456788999999999888876
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 76 ~~~~id~vi~~ag~~ 90 (256)
T PRK08643 76 TFGDLNVVVNNAGVA 90 (256)
T ss_pred HcCCCCEEEECCCCC
Confidence 469999999864
No 112
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.71 E-value=5.3e-08 Score=88.78 Aligned_cols=79 Identities=24% Similarity=0.289 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+|+||+..||..+++++.+.| -+|+|.||++++|++..++. +.+...+||+.|.+++++++.
T Consensus 6 nTiLITGG~sGIGl~lak~f~elg-------N~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELG-------NTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhC-------CEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHH
Confidence 369999999999999999999998 58999999999998887754 467889999999998888876
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
+.+++|||||....
T Consensus 74 k~~P~lNvliNNAGIqr~ 91 (245)
T COG3967 74 KEYPNLNVLINNAGIQRN 91 (245)
T ss_pred hhCCchheeeecccccch
Confidence 56999999997543
No 113
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.71 E-value=9.1e-08 Score=93.81 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++++.++++. ...+..+.+|++|.++++++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARG-------AKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7999999999999888887741 2344556699999999988765
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 80 ~~~~g~id~vI~nAG~~~ 97 (296)
T PRK05872 80 VERFGGIDVVVANAGIAS 97 (296)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4699999999743
No 114
>PRK08251 short chain dehydrogenase; Provisional
Probab=98.71 E-value=7.6e-08 Score=91.17 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++.. ....++.++.+|++|++++.++++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKG-------RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 369999999999999999999987 7899999999888777665532 012357788999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (248)
T PRK08251 76 RDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 479999999853
No 115
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.71 E-value=7.6e-08 Score=96.20 Aligned_cols=81 Identities=16% Similarity=0.088 Sum_probs=69.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 k~vlITGas~gIG~~la~~la~~G-------~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRG-------AKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999998887776631 23457788999999999998865
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 81 ~~~g~iD~lInnAg~~ 96 (334)
T PRK07109 81 EELGPIDTWVNNAMVT 96 (334)
T ss_pred HHCCCCCEEEECCCcC
Confidence 579999999964
No 116
>PRK08589 short chain dehydrogenase; Validated
Probab=98.70 E-value=2e-07 Score=90.11 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++++|+.+++.|++++ .+|++.+|+ ++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G-------~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEG-------AYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEIK 77 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999 777777766632 12357789999999999988776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~g~id~li~~Ag~~ 93 (272)
T PRK08589 78 EQFGRVDVLFNNAGVD 93 (272)
T ss_pred HHcCCcCEEEECCCCC
Confidence 369999999964
No 117
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.70 E-value=8.8e-08 Score=92.58 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=68.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAG-------AKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999999888777776631 12356788999999999888765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 82 ~~~~g~id~li~~ag~~ 98 (278)
T PRK08277 82 LEDFGPCDILINGAGGN 98 (278)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
No 118
>PRK06172 short chain dehydrogenase; Provisional
Probab=98.70 E-value=5.8e-08 Score=92.34 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=68.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|.+++.+++++
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~ 79 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREG-------AKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQTI 79 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999887776665532 234578899999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 80 ~~~g~id~li~~ag~~ 95 (253)
T PRK06172 80 AAYGRLDYAFNNAGIE 95 (253)
T ss_pred HHhCCCCEEEECCCCC
Confidence 49999999964
No 119
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.70 E-value=8.2e-08 Score=92.61 Aligned_cols=82 Identities=20% Similarity=0.250 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+++|+||+|+||+.++++|++++ ++|++.+|+.++++...+++... ...++.++.+|+.|++++.++++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAG-------AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 579999999999999999999987 78999999988887776665320 12356788999999999988877
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 81 ~~~~~~~d~li~~ag~~ 97 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGS 97 (276)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 579999999854
No 120
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.70 E-value=9.8e-08 Score=90.23 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=68.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ +++++.+|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAG-------ATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAAA 79 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7898899999988777766531 22467889999999999988875
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 80 ~~~~~id~vi~~ag~~ 95 (250)
T PRK12939 80 AALGGLDGLVNNAGIT 95 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999964
No 121
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.70 E-value=8.3e-08 Score=91.45 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...|+|+||+|+||+.++++|++++ ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAG-------AHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999987 7999999999888877766532 234577899999999999888763
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~id~vi~~ag~~ 99 (256)
T PRK06124 83 DAEHGRLDILVNNVGAR 99 (256)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 58999999964
No 122
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.70 E-value=5.5e-08 Score=95.02 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=75.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc-C
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-K 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-d 90 (420)
+|+|+|||||+|++++++|++.+ ++|...+|...+..... ..+.++.+|++|.+.+.+.++.. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG-------HDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC-------CeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCC
Confidence 49999999999999999999987 89999999877653221 25678999999998888889988 9
Q ss_pred eeEeccCCCCCC-----------------cHHHHHHHHHcCCc-EEecC
Q 014694 91 LLLNCVGPYRLH-----------------GDPVAAACVHSGCD-YLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~-----------------~~~vv~Ac~~~g~~-yvdis 121 (420)
+|||+++..... ..+++++|.++++. .|..|
T Consensus 67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~s 115 (314)
T COG0451 67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFAS 115 (314)
T ss_pred EEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeC
Confidence 999999976421 16778888887774 44433
No 123
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.69 E-value=1e-07 Score=89.83 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=67.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..+++|+||+|++|+.++++|++++ ..|.+.+|+.++++++.+.++ .++.++.+|++|.++++++++
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQG-------AIVGLHGTRVEKLEALAAELG----ERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 688888999988887766553 357788999999999988765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (245)
T PRK12936 75 EADLEGVDILVNNAGIT 91 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 479999999964
No 124
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.69 E-value=1.2e-07 Score=92.13 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=79.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR----s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
...|+|+||+||||+|++-+|.+++ +.|.+++. ..+.+..+.+-.. +...+.++.+|+.|.+.|+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~g-------y~v~~vDNl~n~~~~sl~r~~~l~~--~~~~v~f~~~Dl~D~~~L~kv 72 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRG-------YGVVIVDNLNNSYLESLKRVRQLLG--EGKSVFFVEGDLNDAEALEKL 72 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCC-------CcEEEEecccccchhHHHHHHHhcC--CCCceEEEEeccCCHHHHHHH
Confidence 3579999999999999999999998 78998885 3345544444332 346899999999999999999
Q ss_pred Hhc--cCeeEeccCCCCC----------C------cHHHHHHHHHcCCc-EEecCCc
Q 014694 86 CSQ--TKLLLNCVGPYRL----------H------GDPVAAACVHSGCD-YLDISGE 123 (420)
Q Consensus 86 ~~~--~dvVIn~aGp~~~----------~------~~~vv~Ac~~~g~~-yvdisge 123 (420)
++. .|-|+|.|+--.. + ..+++++|+++++. .|.+|+.
T Consensus 73 F~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssa 129 (343)
T KOG1371|consen 73 FSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSA 129 (343)
T ss_pred HhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecce
Confidence 984 6899999984221 1 27778888888874 4444433
No 125
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.69 E-value=9.7e-08 Score=89.40 Aligned_cols=80 Identities=24% Similarity=0.223 Sum_probs=67.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...|+|+||||++|+.+++.|++++ ++|++++|+.++..+..+++. .....++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARG-------ARVALIGRGAAPLSQTLPGVP---ADALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCC-------CeEEEEeCChHhHHHHHHHHh---hcCceEEEeecCCHHHHHHHHHHH
Confidence 3479999999999999999999987 789999999888776666553 2356788899999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 77 ~~~~~~~d~vi~~ag~~ 93 (239)
T PRK12828 77 NRQFGRLDALVNIAGAF 93 (239)
T ss_pred HHHhCCcCEEEECCccc
Confidence 479999999864
No 126
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.69 E-value=9.8e-08 Score=91.01 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=67.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.++++|++++ .+|++.+|+.++++.+.+++. ..++.++.+|+.|.+++.+++.+
T Consensus 4 ~ilItGat~~iG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 4 TALVTGAAGGIGQALARRFLAAG-------DRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred EEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999998887777663 24577899999999999888764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 74 ~~~~~d~vi~~ag~~ 88 (257)
T PRK07074 74 ERGPVDVLVANAGAA 88 (257)
T ss_pred HcCCCCEEEECCCCC
Confidence 79999999864
No 127
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.69 E-value=8.1e-08 Score=91.77 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|.+++++|++++ ++|++++|+.++++...+.+.. ...++.++.+|++|+++++++++
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAG-------ARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999888777766531 12356789999999999977665
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 85 ~~~~~id~vi~~ag~~ 100 (259)
T PRK08213 85 ERFGHVDILVNNAGAT 100 (259)
T ss_pred HHhCCCCEEEECCCCC
Confidence 479999999853
No 128
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.68 E-value=1.3e-07 Score=89.53 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=66.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++++++.++++ .++.++.+|+.|.+++.++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEG-------ARVAITGRDPASLEAARAELG----ESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999888877777663 356788999999988777654
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 76 ~~~~~id~vi~~ag~~~ 92 (249)
T PRK06500 76 EAFGRLDAVFINAGVAK 92 (249)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999643
No 129
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.68 E-value=1.1e-07 Score=91.29 Aligned_cols=83 Identities=20% Similarity=0.151 Sum_probs=69.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ +++++.+|+.+++++..+++.. ...++.++.+|++|++++++++.+
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAG-------ATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999999988877766631 123577899999999999998864
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 82 ~~~~~~id~li~~ag~~~ 99 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIK 99 (265)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 799999999643
No 130
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.68 E-value=7.4e-08 Score=93.36 Aligned_cols=82 Identities=23% Similarity=0.311 Sum_probs=66.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~-- 89 (420)
+|+|+|||||+|++++++|++++ ++|.+..|+ .+|+.|++++.++++++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g-------~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~ 51 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG-------RVVVALTSS----------------------QLDLTDPEALERLLRAIRP 51 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC-------CEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCC
Confidence 48999999999999999999987 788888874 25888999999999876
Q ss_pred CeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisg 122 (420)
|+||||+|+.... ..+++++|.+.+.++|.+|.
T Consensus 52 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss 100 (287)
T TIGR01214 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHIST 100 (287)
T ss_pred CEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 9999999974321 25677788877777777765
No 131
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1.1e-07 Score=90.89 Aligned_cols=81 Identities=28% Similarity=0.286 Sum_probs=67.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.+++.|++.+ ++|++.+|+.++++++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlVtGasg~iG~~la~~l~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 74 (263)
T PRK06181 3 VVIITGASEGIGRALAVRLARAG-------AQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAVA 74 (263)
T ss_pred EEEEecCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999887 7899999998888777666532 22356788999999999988876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 75 ~~~~id~vi~~ag~~~ 90 (263)
T PRK06181 75 RFGGIDILVNNAGITM 90 (263)
T ss_pred HcCCCCEEEECCCccc
Confidence 5799999999754
No 132
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.67 E-value=8.7e-08 Score=92.61 Aligned_cols=78 Identities=18% Similarity=0.122 Sum_probs=66.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|+|+||+|++|++++++|++++ ++|++.+|+.++++.+.+.+. ..+.++.+|++|++++.++++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERG-------DRVVATARDTATLADLAEKYG----DRLLPLALDVTDRAAVFAAVETAVE 73 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcc----CCeeEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999998877766542 356788999999999988876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
.+|+||||+|...
T Consensus 74 ~~~~~d~vi~~ag~~~ 89 (275)
T PRK08263 74 HFGRLDIVVNNAGYGL 89 (275)
T ss_pred HcCCCCEEEECCCCcc
Confidence 4699999999653
No 133
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.67 E-value=9.5e-08 Score=90.52 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=65.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+++|+||+|++|+.++++|++++ .+|++ ..|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEG-------YDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 67655 58888887776666531 13457788999999999998877
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (250)
T PRK08063 77 DEEFGRLDVFVNNAASG 93 (250)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 369999999864
No 134
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1e-07 Score=91.28 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=69.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++. ...++.++.+|+.|++++.++++
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~ 76 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAG-------ARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARAR 76 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999988 789999999998888777663 23467889999999999888765
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 77 ~~~~id~lv~~ag~~~ 92 (263)
T PRK09072 77 EMGGINVLINNAGVNH 92 (263)
T ss_pred hcCCCCEEEECCCCCC
Confidence 4699999999643
No 135
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.67 E-value=2.4e-08 Score=97.74 Aligned_cols=87 Identities=26% Similarity=0.455 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+||+|++|+.++++|.+++ +++...+|+ ..|+.|.+++.+++++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~-------~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~ 51 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG-------YEVIATSRS----------------------DLDLTDPEAVAKLLEAFK 51 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS-------EEEEEESTT----------------------CS-TTSHHHHHHHHHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC-------CEEEEeCch----------------------hcCCCCHHHHHHHHHHhC
Confidence 789999999999999999998876 788887775 2578899999999875
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.|+||||||..... ..+++++|.+.|+++|.+|.+..|
T Consensus 52 pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VF 105 (286)
T PF04321_consen 52 PDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVF 105 (286)
T ss_dssp -SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS
T ss_pred CCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEE
Confidence 79999999864321 268899999999999999977665
No 136
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.67 E-value=1e-07 Score=91.16 Aligned_cols=103 Identities=15% Similarity=0.248 Sum_probs=65.2
Q ss_pred EEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhCCC---------CCCCccEEEEeCCCH---
Q 014694 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPS---------HSLSIPILTADTTDP--- 79 (420)
Q Consensus 15 V~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~~~---------~~~~~~~i~~D~~d~--- 79 (420)
|||||||+|++++++|++..+ ..+|.+..|+.+ ..+++.+.+... ...++.++.+|++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~-----~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP-----DVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS------TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC-----CcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999999873 148999999763 344443433220 146899999999864
Q ss_pred ---HHHHHHHhccCeeEeccCCCCCCc-------------HHHHHHHHHcC-CcEEecCC
Q 014694 80 ---PSLHRLCSQTKLLLNCVGPYRLHG-------------DPVAAACVHSG-CDYLDISG 122 (420)
Q Consensus 80 ---~sl~~~~~~~dvVIn~aGp~~~~~-------------~~vv~Ac~~~g-~~yvdisg 122 (420)
+....+.+++|+|||||+...... .++++.|.+.+ .+++.+|.
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST 135 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST 135 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred CChHHhhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence 578888899999999999766542 66777777443 25666654
No 137
>PRK07062 short chain dehydrogenase; Provisional
Probab=98.67 E-value=9e-08 Score=91.76 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.+++++..+++... ...++..+.+|++|.+++.++++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAG-------ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV 81 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999999888777665321 11356678999999999988765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 82 ~~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 82 EARFGGVDMLVNNAGQG 98 (265)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 369999999964
No 138
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.66 E-value=1.1e-07 Score=90.06 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++.+++.+++.. ...++.++.+|+.|.++++++++
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEG-------AKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 469999999999999999999987 7899999999887776665531 12457889999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~~d~vi~~ag~~ 91 (250)
T TIGR03206 76 QALGPVDVLVNNAGWD 91 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999864
No 139
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.66 E-value=1.5e-07 Score=94.28 Aligned_cols=107 Identities=18% Similarity=0.248 Sum_probs=72.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|+|+|||||+|++++++|++++. ..+++.+|.. ...+.+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ------DSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC------CeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHh
Confidence 4799999999999999999999872 2344444432 2222222 221 123467789999999999999974
Q ss_pred --cCeeEeccCCCCCC----------------cHHHHHHHHHc---------CC-cEEecCCcHHH
Q 014694 89 --TKLLLNCVGPYRLH----------------GDPVAAACVHS---------GC-DYLDISGEPEF 126 (420)
Q Consensus 89 --~dvVIn~aGp~~~~----------------~~~vv~Ac~~~---------g~-~yvdisge~~~ 126 (420)
+|+|||+||..... ..+++++|.+. ++ ++|.+|....+
T Consensus 72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vy 137 (352)
T PRK10084 72 HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVY 137 (352)
T ss_pred cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhc
Confidence 89999999964321 26777888763 23 57777654433
No 140
>PRK07904 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.1e-07 Score=91.20 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=68.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
....|+|+||+|++|+.++++|++++. .+|++.+|+.++ ++++.+++......++.++.+|+.|++++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg------~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~ 80 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP------ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVID 80 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC------CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHH
Confidence 345799999999999999999999852 789999999886 7777766642112367889999999998766654
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||++|...
T Consensus 81 ~~~~~g~id~li~~ag~~~ 99 (253)
T PRK07904 81 AAFAGGDVDVAIVAFGLLG 99 (253)
T ss_pred HHHhcCCCCEEEEeeecCC
Confidence 6899999998653
No 141
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.2e-07 Score=91.39 Aligned_cols=81 Identities=15% Similarity=0.122 Sum_probs=65.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||+|++|+.++++|++++ .+|++.+|+.+++++..+++.........++.+|++|++++.+++.+
T Consensus 2 ~vlItGas~giG~~la~~la~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQG-------AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence 68999999999999999999987 78999999998887776665321112244578999999998887764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 75 ~~~~id~lv~~ag~~ 89 (272)
T PRK07832 75 AHGSMDVVMNIAGIS 89 (272)
T ss_pred hcCCCCEEEECCCCC
Confidence 69999999964
No 142
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.66 E-value=1e-07 Score=90.78 Aligned_cols=82 Identities=11% Similarity=0.102 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ +++++.+|+.++++++.+++.. ...++.++.+|++|++++.+++..
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G-------~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYG-------AEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHI 80 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7999999999988887776642 123566788999999999988753
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 81 ~~~~~~id~vi~~ag~~ 97 (254)
T PRK08085 81 EKDIGPIDVLINNAGIQ 97 (254)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 69999999964
No 143
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.3e-07 Score=89.62 Aligned_cols=76 Identities=26% Similarity=0.253 Sum_probs=65.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
.++|+||||++|+.+++.|++++ ++|++.+|+.++++++.+.. .++.++.+|++|++++++++++
T Consensus 3 ~vlItGas~giG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQG-------WQVIACGRNQSVLDELHTQS-----ANIFTLAFDVTDHPGTKAALSQLPF 70 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhc-----CCCeEEEeeCCCHHHHHHHHHhccc
Confidence 58999999999999999999988 78999999998887765532 3578899999999999999886
Q ss_pred -cCeeEeccCCC
Q 014694 89 -TKLLLNCVGPY 99 (420)
Q Consensus 89 -~dvVIn~aGp~ 99 (420)
.|++||++|..
T Consensus 71 ~~d~~i~~ag~~ 82 (240)
T PRK06101 71 IPELWIFNAGDC 82 (240)
T ss_pred CCCEEEEcCccc
Confidence 47889999853
No 144
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.66 E-value=8.2e-08 Score=92.92 Aligned_cols=84 Identities=25% Similarity=0.257 Sum_probs=67.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCC-CccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL-SIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~-~~~~i~~D~~d~~sl~~~~~- 87 (420)
...|+|||||..||.++|.+|++.| .++++..|+..+++.+.+++...... ++.++++|++|.+++.++++
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G-------~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~ 84 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRG-------AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEW 84 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHH
Confidence 3479999999999999999999998 67777788777777775555431122 58899999999999997764
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++||+||...
T Consensus 85 ~~~~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 85 AIRHFGRVDVLVNNAGISL 103 (282)
T ss_pred HHHhcCCCCEEEecCcccc
Confidence 6899999999765
No 145
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.2e-07 Score=90.74 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+.++|+||+|++|+++++.|++++ .+++++.| +.++++.+.+++.. ...++.++.+|++|.+++.+++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHG-------FDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4579999999999999999999987 67777665 55666666555421 124577899999999999988764
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 81 ~~~~~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 81 ASAALGPITLLVNNASLFE 99 (258)
T ss_pred HHHHcCCCCEEEECCcCCC
Confidence 699999999643
No 146
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.66 E-value=1.1e-07 Score=89.48 Aligned_cols=81 Identities=20% Similarity=0.191 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||||++|+.+++.|++++ +++++. +|+.++++.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEG-------AKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999887 788888 9998888777665531 12457789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
.+|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (247)
T PRK05565 78 VEKFGKIDILVNNAGIS 94 (247)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 689999999975
No 147
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.65 E-value=1.7e-07 Score=89.45 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=65.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+..+++...+++. ..++.+|++|+++++++++
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~ 74 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEG-------ATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAA 74 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 789999999888877766553 2578999999999998887
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (255)
T PRK06057 75 ETYGSVDIAFNNAGIS 90 (255)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999864
No 148
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.65 E-value=2.2e-07 Score=92.46 Aligned_cols=106 Identities=18% Similarity=0.240 Sum_probs=74.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh------HHHHHHHHhCCC---CC-CCccEEEEeCCC---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT------RVKQALQWASPS---HS-LSIPILTADTTD--- 78 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~------kl~~~~~~l~~~---~~-~~~~~i~~D~~d--- 78 (420)
+|+|+|||||+|++++++|++++. ..+|.+..|+.+ ++++..+..... .. .++.++.+|+++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~-----~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST-----QAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC-----CCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 489999999999999999999862 157899999765 222222222110 01 467888999875
Q ss_pred ---HHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCCc-EEecCC
Q 014694 79 ---PPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGCD-YLDISG 122 (420)
Q Consensus 79 ---~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~~-yvdisg 122 (420)
.+.+.++..++|+|||+++..... ..+++++|.+.+.+ ++.+|.
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS 136 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVST 136 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEcc
Confidence 356778888999999999965421 15677888887764 565553
No 149
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.65 E-value=2e-07 Score=87.88 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=66.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.+++.|++++ ++|++.+|+.++++++.+.. +..++.+|++|.+++.++++.
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 76 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRG-------ARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAAG 76 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHhC
Confidence 479999999999999999999987 78999999998887766544 246788999999999988874
Q ss_pred -cCeeEeccCCCC
Q 014694 89 -TKLLLNCVGPYR 100 (420)
Q Consensus 89 -~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 77 ~~d~vi~~ag~~~ 89 (245)
T PRK07060 77 AFDGLVNCAGIAS 89 (245)
T ss_pred CCCEEEECCCCCC
Confidence 799999999643
No 150
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.64 E-value=1.9e-07 Score=83.75 Aligned_cols=75 Identities=25% Similarity=0.336 Sum_probs=67.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+||||-+|+.++++..++| +.|+.+.||.+|+... ..+.+++.|+.|++++.+.+.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG-------HeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG-------HEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLAGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC-------CeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhcCCc
Confidence 689999999999999999999998 8999999999998432 356789999999999999999999
Q ss_pred eeEeccCCCCC
Q 014694 91 LLLNCVGPYRL 101 (420)
Q Consensus 91 vVIn~aGp~~~ 101 (420)
+||+..|....
T Consensus 65 aVIsA~~~~~~ 75 (211)
T COG2910 65 AVISAFGAGAS 75 (211)
T ss_pred eEEEeccCCCC
Confidence 99999998743
No 151
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.64 E-value=6.4e-08 Score=95.04 Aligned_cols=96 Identities=15% Similarity=0.220 Sum_probs=62.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC---HHH-HHHHHh-
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---PPS-LHRLCS- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d---~~s-l~~~~~- 87 (420)
|+|+|||||+|++++++|++++ ++++++.|+.+...... .+..+|+.| .++ ++++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~ 63 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG-------ITDILVVDNLKDGTKFV-----------NLVDLDIADYMDKEDFLAQIMAG 63 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC-------CceEEEecCCCcchHHH-----------hhhhhhhhhhhhHHHHHHHHhcc
Confidence 8999999999999999999987 55555555433211110 111234443 333 233332
Q ss_pred ----ccCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 ----QTKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|||+||..... ..+++++|.++++++|.+|....+
T Consensus 64 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vy 120 (308)
T PRK11150 64 DDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY 120 (308)
T ss_pred cccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHh
Confidence 689999999732211 267899999999988888766544
No 152
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.3e-07 Score=90.30 Aligned_cols=80 Identities=15% Similarity=0.064 Sum_probs=66.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .++++++|+++++ ++.+++.. ...++.++.+|++|++++.++++
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEG-------AIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcC-------CcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999998877 55555431 13467889999999999998886
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 79 ~~~~~id~vi~~ag~~ 94 (258)
T PRK08628 79 AKFGRIDGLVNNAGVN 94 (258)
T ss_pred HhcCCCCEEEECCccc
Confidence 479999999953
No 153
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.4e-07 Score=91.20 Aligned_cols=81 Identities=27% Similarity=0.237 Sum_probs=65.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.+++.|++++ ++|++++|+.++++.+.+.+... ...++.++.+|++|++++++ ++
T Consensus 5 ~~lItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~ 76 (280)
T PRK06914 5 IAIVTGASSGFGLLTTLELAKKG-------YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVL 76 (280)
T ss_pred EEEEECCCchHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHH
Confidence 58999999999999999999987 79999999998887766554310 12467889999999998876 43
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 77 ~~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 77 KEIGRIDLLVNNAGYAN 93 (280)
T ss_pred HhcCCeeEEEECCcccc
Confidence 4699999999644
No 154
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.62 E-value=1.3e-07 Score=90.06 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|++|++++++++.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEG-------ANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQID 73 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 368999999999999999999988 7899999999888777666531 12457789999999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~~id~lI~~ag~~ 89 (252)
T PRK07677 74 EKFGRIDALINNAAGN 89 (252)
T ss_pred HHhCCccEEEECCCCC
Confidence 469999999854
No 155
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.62 E-value=1.7e-07 Score=89.50 Aligned_cols=82 Identities=16% Similarity=0.181 Sum_probs=65.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|+||+.++++|++++ ++|++++|+ ++++++.+.+.. ...++.++.+|++|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAG-------ADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 789999998 555444443321 12457889999999999998887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 86 ~~~~g~id~li~~ag~~~ 103 (258)
T PRK06935 86 LEEFGKIDILVNNAGTIR 103 (258)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5699999999643
No 156
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.62 E-value=1.3e-07 Score=90.22 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=66.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+|++|+.++++|++++ ++|++++|+.++++.+.+++.... ..++.++.+|++|.+++.+++.
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 76 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEG-------YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVD 76 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 799999999888877766553101 1357789999999999888776
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 77 ~~~~~id~vv~~ag~~ 92 (259)
T PRK12384 77 EIFGRVDLLVYNAGIA 92 (259)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999854
No 157
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.62 E-value=1.5e-07 Score=89.31 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=66.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAG-------ANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAA 74 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 7899999998888777665531 12457789999999997766654
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 75 ~~~~~d~vi~~a~~~~ 90 (255)
T TIGR01963 75 EFGGLDILVNNAGIQH 90 (255)
T ss_pred hcCCCCEEEECCCCCC
Confidence 4699999998643
No 158
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.61 E-value=1.8e-07 Score=82.93 Aligned_cols=82 Identities=23% Similarity=0.355 Sum_probs=69.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.++|+||++.+|+.++++|++++. ..|++.+|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEV 74 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccc-ccccccccccccccccccccccccc
Confidence 589999999999999999999962 789999999 7777777776642 23577889999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 75 ~~~~~~ld~li~~ag~~~ 92 (167)
T PF00106_consen 75 IKRFGPLDILINNAGIFS 92 (167)
T ss_dssp HHHHSSESEEEEECSCTT
T ss_pred cccccccccccccccccc
Confidence 4699999999765
No 159
>PLN02778 3,5-epimerase/4-reductase
Probab=98.61 E-value=3e-07 Score=90.48 Aligned_cols=82 Identities=13% Similarity=0.176 Sum_probs=58.7
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...|+|+|+||+||+|++++++|++++ ++|.+..+ |+.|.+.+...++
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g-------~~V~~~~~-------------------------~~~~~~~v~~~l~ 54 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQG-------IDFHYGSG-------------------------RLENRASLEADID 54 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC-------CEEEEecC-------------------------ccCCHHHHHHHHH
Confidence 345799999999999999999999987 67754322 2233444444444
Q ss_pred --ccCeeEeccCCCCC----C---------------cHHHHHHHHHcCCcEEecC
Q 014694 88 --QTKLLLNCVGPYRL----H---------------GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 88 --~~dvVIn~aGp~~~----~---------------~~~vv~Ac~~~g~~yvdis 121 (420)
++|+||||||.... . ..+++++|.+.|++.+.++
T Consensus 55 ~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~s 109 (298)
T PLN02778 55 AVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYA 109 (298)
T ss_pred hcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 68999999997531 0 1678888888888766654
No 160
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.61 E-value=1.8e-07 Score=93.40 Aligned_cols=107 Identities=19% Similarity=0.268 Sum_probs=77.2
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++...++|+||+||+|++++++|++++. ..++++++..........+..+. ...+++.+.+|+.|...+.+.+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-----~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-----KLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-----ccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc
Confidence 3556899999999999999999999973 27899999876421111111110 14578899999999999999999
Q ss_pred ccCeeEeccCCCCCC--------------c-HHHHHHHHHcCCc-EEec
Q 014694 88 QTKLLLNCVGPYRLH--------------G-DPVAAACVHSGCD-YLDI 120 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~--------------~-~~vv~Ac~~~g~~-yvdi 120 (420)
++-||+|+|++.... | .+++++|++.|+. .|.+
T Consensus 76 ~~~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYt 124 (361)
T KOG1430|consen 76 GAVVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYT 124 (361)
T ss_pred CceEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEe
Confidence 994444444443221 3 8899999999996 4443
No 161
>PRK05599 hypothetical protein; Provisional
Probab=98.61 E-value=1.9e-07 Score=88.95 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|.++|+||++.+|+.++++|++ + .+|++++|+.++++++.+++.......+.++.+|+.|++++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~~-g-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 72 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLCH-G-------EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQ 72 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHhC-C-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHH
Confidence 4689999999999999999984 6 7899999999999888877742111236788999999999988765
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|++||++|.+.
T Consensus 73 ~~~g~id~lv~nag~~~ 89 (246)
T PRK05599 73 ELAGEISLAVVAFGILG 89 (246)
T ss_pred HhcCCCCEEEEecCcCC
Confidence 4699999999753
No 162
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.60 E-value=1.6e-07 Score=90.39 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=66.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|+||+.++++|++++ ++|++++|+.++++...+++.. ...++.++.+|++|++++.+++++
T Consensus 10 k~ilItGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAG-------ANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999998887766655531 123456789999999999988764
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 82 ~~~~~iD~vi~~ag~~ 97 (264)
T PRK07576 82 DEFGPIDVLVSGAAGN 97 (264)
T ss_pred HHcCCCCEEEECCCCC
Confidence 59999999853
No 163
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.60 E-value=1.6e-07 Score=89.27 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=66.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ .++++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 73 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDG-------FAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAE 73 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999987 7899999998887777666531 23457789999999999988765
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~id~vi~~ag~~ 88 (254)
T TIGR02415 74 KFGGFDVMVNNAGVA 88 (254)
T ss_pred HcCCCCEEEECCCcC
Confidence 369999999964
No 164
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.60 E-value=2.5e-07 Score=88.30 Aligned_cols=82 Identities=18% Similarity=0.074 Sum_probs=67.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...|+|+||+|++|+.++++|++++ .++++++|+.++++++.+++.. ...++.++.+|++|.+++.+++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G-------~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 82 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999988 7899999998888777665531 123567889999999999887663
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 83 ~~~~~~~d~li~~ag~~ 99 (255)
T PRK06113 83 LSKLGKVDILVNNAGGG 99 (255)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999964
No 165
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.59 E-value=1.8e-07 Score=87.99 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=61.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+|+|+||||++|+.++++|++++ +++++..|+. +.++.+.+.+.. ...++.++.+|+.|++++.++++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAG-------ADVVVHYRSDEEAAEELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHH
Confidence 479999999999999999999987 6777656654 344444443321 13467889999999999998875
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|+|||++|.
T Consensus 79 ~~~~~~id~vi~~ag~ 94 (249)
T PRK12825 79 VERFGRIDILVNNAGI 94 (249)
T ss_pred HHHcCCCCEEEECCcc
Confidence 46999999994
No 166
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.59 E-value=2.2e-07 Score=89.74 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=63.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.+++.|++++ ++|++.+|+.++++.+.+ .++.++.+|+.|+++++++++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAG-------YEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 799999999888765532 235788999999999988775
Q ss_pred ---ccCeeEeccCCC
Q 014694 88 ---QTKLLLNCVGPY 99 (420)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 69 ~~~~id~vi~~ag~~ 83 (274)
T PRK05693 69 EHGGLDVLINNAGYG 83 (274)
T ss_pred hcCCCCEEEECCCCC
Confidence 469999999964
No 167
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.59 E-value=2.1e-07 Score=88.42 Aligned_cols=80 Identities=11% Similarity=0.090 Sum_probs=67.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||..++++|++++ .+|++++|+.++++.+.+++.. ...++.++.+|+.|.++++++++
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQG-------AHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999999888877776631 12346788999999999888766
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 81 ~~~~~id~li~~ag~ 95 (252)
T PRK07035 81 ERHGRLDILVNNAAA 95 (252)
T ss_pred HHcCCCCEEEECCCc
Confidence 47999999985
No 168
>PRK08264 short chain dehydrogenase; Validated
Probab=98.59 E-value=2.5e-07 Score=87.05 Aligned_cols=74 Identities=26% Similarity=0.283 Sum_probs=63.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...|+|+||||++|+.++++|++++ . +|++.+|+.+++++ . ..++.++.+|+.|.+++.+++++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARG-------AAKVYAAARDPESVTD----L----GPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------cccEEEEecChhhhhh----c----CCceEEEEecCCCHHHHHHHHHh
Confidence 3579999999999999999999987 5 89999999887643 2 24678899999999999998874
Q ss_pred ---cCeeEeccCC
Q 014694 89 ---TKLLLNCVGP 98 (420)
Q Consensus 89 ---~dvVIn~aGp 98 (420)
.|+|||++|.
T Consensus 71 ~~~id~vi~~ag~ 83 (238)
T PRK08264 71 ASDVTILVNNAGI 83 (238)
T ss_pred cCCCCEEEECCCc
Confidence 7999999997
No 169
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.59 E-value=2.2e-07 Score=86.95 Aligned_cols=76 Identities=25% Similarity=0.220 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+.++.+.+. ++ .++.++.+|++|+++++++++
T Consensus 3 ~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~~ 69 (225)
T PRK08177 3 TALIIGASRGLGLGLVDRLLERG-------WQVTATVRGPQQDTALQ-AL-----PGVHIEKLDMNDPASLDQLLQRLQG 69 (225)
T ss_pred EEEEeCCCchHHHHHHHHHHhCC-------CEEEEEeCCCcchHHHH-hc-----cccceEEcCCCCHHHHHHHHHHhhc
Confidence 59999999999999999999987 79999999988765442 22 356788999999999988877
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 70 ~~id~vi~~ag~~~ 83 (225)
T PRK08177 70 QRFDLLFVNAGISG 83 (225)
T ss_pred CCCCEEEEcCcccC
Confidence 4799999999753
No 170
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.59 E-value=3e-07 Score=86.42 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||||++|+.++++|++++ ++|++..|+.. +++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQG-------ANVVINYASSEAGAEALVAEIGA-LGGKALAVQGDVSDAESVERAVDEA 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 78877777654 34455454421 23457788899999999988776
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 78 ~~~~~~id~vi~~ag~~~ 95 (248)
T PRK05557 78 KAEFGGVDILVNNAGITR 95 (248)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 5799999999643
No 171
>PRK07069 short chain dehydrogenase; Validated
Probab=98.59 E-value=2.1e-07 Score=88.10 Aligned_cols=82 Identities=20% Similarity=0.164 Sum_probs=64.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHh--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
+++|+||+|++|+++++.|++++ ++|++.+|+ .++++++.+++.... ...+.++.+|+.|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG-------AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA 73 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence 38999999999999999999987 799999998 777777766553100 1123457899999999988775
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 74 ~~~~~~id~vi~~ag~~~ 91 (251)
T PRK07069 74 ADAMGGLSVLVNNAGVGS 91 (251)
T ss_pred HHHcCCccEEEECCCcCC
Confidence 4699999999754
No 172
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.58 E-value=2.5e-07 Score=88.39 Aligned_cols=79 Identities=22% Similarity=0.144 Sum_probs=62.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|++++++|++++ ++|++.+|+.. ++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G-------~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEG-------ARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 78999999853 3344444421 12356788999999998888776
Q ss_pred ----ccCeeEeccCC
Q 014694 88 ----QTKLLLNCVGP 98 (420)
Q Consensus 88 ----~~dvVIn~aGp 98 (420)
+.|+|||+||.
T Consensus 80 ~~~~~id~lv~nAg~ 94 (260)
T PRK12823 80 EAFGRIDVLINNVGG 94 (260)
T ss_pred HHcCCCeEEEECCcc
Confidence 46999999984
No 173
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.58 E-value=2.2e-07 Score=89.07 Aligned_cols=82 Identities=12% Similarity=0.108 Sum_probs=65.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+++||+.+++.|++.+ .+|++.+| +.++++.+.+++......++.++.+|++|+++++++++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSG-------VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78887764 66777666655531112457789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 82 ~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 82 DEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHhcCCccEEEECcccc
Confidence 369999999854
No 174
>PRK05855 short chain dehydrogenase; Validated
Probab=98.58 E-value=2.1e-07 Score=98.84 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=70.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+...++|+||+|++|+.++++|++++ .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREG-------AEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 44579999999999999999999988 7899999999998887766632 123578899999999999998864
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.|+||||||...
T Consensus 386 ~~~~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 386 VRAEHGVPDIVVNNAGIGM 404 (582)
T ss_pred HHHhcCCCcEEEECCccCC
Confidence 699999999753
No 175
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.58 E-value=2.9e-07 Score=90.24 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=70.8
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----c
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----Q 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----~ 88 (420)
|+|+|||||+|+++++.|.+++. ..|.+.+|..... .+ .++. ...+..|+++.+.++.+.+ +
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~-~~-~~~~------~~~~~~d~~~~~~~~~~~~~~~~~ 66 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI------TDILVVDNLRDGH-KF-LNLA------DLVIADYIDKEDFLDRLEKGAFGK 66 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC------ceEEEEecCCCch-hh-hhhh------heeeeccCcchhHHHHHHhhccCC
Confidence 68999999999999999999871 2677777654321 11 1111 1245678888888877764 7
Q ss_pred cCeeEeccCCCCCC--------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLH--------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~--------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+|||+|++.... ..+++++|.+.++++|.+|...
T Consensus 67 ~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~ 116 (314)
T TIGR02197 67 IEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAA 116 (314)
T ss_pred CCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHH
Confidence 99999999964321 1668899999888888888644
No 176
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.57 E-value=3.1e-07 Score=88.87 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=64.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k-------l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~ 83 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.++ +++..+++.. ...++.++.+|++|++++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDG-------ANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHH
Confidence 479999999999999999999988 789999997643 4444444421 1235678899999999998
Q ss_pred HHHh-------ccCeeEeccCCC
Q 014694 84 RLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~ 99 (420)
++++ +.|+|||++|..
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCc
Confidence 8876 579999999964
No 177
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.57 E-value=3.1e-07 Score=87.29 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+. +++++..+.+.. ...++.++.+|++|++++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAG-------FDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 369999999999999999999987 7899989864 455555554431 12457889999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVG 91 (256)
T ss_pred HHhcCCCCEEEECCccC
Confidence 469999999863
No 178
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.57 E-value=1.4e-07 Score=91.17 Aligned_cols=86 Identities=21% Similarity=0.302 Sum_probs=70.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+|++|.+|+.+++.|. .. .+|...+|.. +|++|++.+.+++++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~ 50 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE----------------------LDITDPDAVLEVIRETR 50 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc----------------------ccccChHHHHHHHHhhC
Confidence 469999999999999999987 22 6777766642 589999999999985
Q ss_pred cCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.|+|||||+..... ..+++++|.+.|+.+|++|.+..|
T Consensus 51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 59999999865543 288999999999999999865554
No 179
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.56 E-value=3.3e-07 Score=87.62 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=68.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|.+|+.+++.|++++ .+|++++|+.++++++.+++......++.++.+|++|++++.++++
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEG-------CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 579999999999999999999987 7999999999988877766642112356788999999999988776
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
+.|++|||+|..
T Consensus 81 ~id~lv~~ag~~ 92 (259)
T PRK06125 81 DIDILVNNAGAI 92 (259)
T ss_pred CCCEEEECCCCC
Confidence 479999999964
No 180
>PLN02996 fatty acyl-CoA reductase
Probab=98.56 E-value=4.8e-07 Score=95.10 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=74.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHh-------------CC----CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWA-------------SP----SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l-------------~~----~~~~~ 68 (420)
+...|+|||||||+|+++++.|++.++. ..+|.+..|... ..+.+..++ .. ....+
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~----v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~k 85 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEK 85 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCC----CCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcC
Confidence 4457999999999999999999987532 147888888642 121211111 00 00146
Q ss_pred ccEEEEeCC-------CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHc-CC-cEEecCC
Q 014694 69 IPILTADTT-------DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHS-GC-DYLDISG 122 (420)
Q Consensus 69 ~~~i~~D~~-------d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~-g~-~yvdisg 122 (420)
+.++.+|++ |.+.++++++++|+|||+|+..... ..+++++|.+. ++ ++|.+|.
T Consensus 86 v~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 86 VTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred EEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 789999998 5556788889999999999975432 16778888775 44 4566553
No 181
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=3.6e-07 Score=86.60 Aligned_cols=77 Identities=14% Similarity=0.084 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..|+|+||+|++|+.+++.|++.+ ++|++.. |+.++++.+.+++. .++.++.+|+.|++++.+++++
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREG-------ARVVVNYHQSEDAAEALADELG----DRAIALQADVTDREQVQAMFATA 74 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 6787765 45666666655542 3577899999999999988764
Q ss_pred -------cCeeEeccCC
Q 014694 89 -------TKLLLNCVGP 98 (420)
Q Consensus 89 -------~dvVIn~aGp 98 (420)
.|+|||++|.
T Consensus 75 ~~~~g~~id~li~~ag~ 91 (253)
T PRK08642 75 TEHFGKPITTVVNNALA 91 (253)
T ss_pred HHHhCCCCeEEEECCCc
Confidence 8999999985
No 182
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.55 E-value=2.7e-07 Score=86.40 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=66.0
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---cC
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ---TK 90 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~---~d 90 (420)
+|+||+|++|+.++++|++++ ++|++.+|+.++++.+.+++. ...++.++.+|++|++++.++++. .|
T Consensus 1 lItGas~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG-------ARVTIASRSRDRLAAAARALG--GGAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 589999999999999999988 789999999888877766653 134577899999999999999875 69
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
++||++|..
T Consensus 72 ~li~~ag~~ 80 (230)
T PRK07041 72 HVVITAADT 80 (230)
T ss_pred EEEECCCCC
Confidence 999999864
No 183
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.55 E-value=4.1e-07 Score=85.80 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=65.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR----s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+.|+|+||+|++|+.++++|++++ +++++.+| +.++++++.+++.. ...++.++.+|+.|++++.++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADG-------ADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHH
Confidence 3579999999999999999999987 67877554 45566555555431 234677899999999999888
Q ss_pred Hh-------ccCeeEeccCCCC
Q 014694 86 CS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (420)
++ ++|+|||++|...
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCC
Confidence 74 5799999999754
No 184
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.55 E-value=3.7e-07 Score=93.44 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=65.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+||+|++|+.+++.|++++ .+|++++|+.++++...... ..++..+.+|++|++++.+.+.+.
T Consensus 178 gK~VLITGASgGIG~aLA~~La~~G-------~~Vi~l~r~~~~l~~~~~~~----~~~v~~v~~Dvsd~~~v~~~l~~I 246 (406)
T PRK07424 178 GKTVAVTGASGTLGQALLKELHQQG-------AKVVALTSNSDKITLEINGE----DLPVKTLHWQVGQEAALAELLEKV 246 (406)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCCeEEEEeeCCCHHHHHHHhCCC
Confidence 4579999999999999999999987 78999999987765443321 124567889999999999999999
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|++||++|..
T Consensus 247 DiLInnAGi~ 256 (406)
T PRK07424 247 DILIINHGIN 256 (406)
T ss_pred CEEEECCCcC
Confidence 9999999964
No 185
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=3.3e-07 Score=86.69 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ .+|++.+|+.++++...+++.. ...++.++.+|+.|.++++++++.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKG-------AKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 3479999999999999999999987 7899999999888777666531 134567889999999988877663
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (253)
T PRK08217 77 AEDFGQLNGLINNAGIL 93 (253)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 69999999953
No 186
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.55 E-value=3.5e-07 Score=87.23 Aligned_cols=82 Identities=15% Similarity=0.115 Sum_probs=65.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.+ .++++.+++.. ...++..+.+|+.|++++++++++
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAG-------ADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999754 45555555531 123567889999999999988764
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 81 ~~~~g~id~li~~ag~~~ 98 (254)
T PRK06114 81 EAELGALTLAVNAAGIAN 98 (254)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 599999999653
No 187
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.55 E-value=3.5e-07 Score=86.00 Aligned_cols=81 Identities=25% Similarity=0.215 Sum_probs=67.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+|+||+|++|+.+++.|++++ ++|++.+|+.++++.+.+++. ...++.++.+|+.|++++++++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEG-------AQVCINSRNENKLKRMKKTLS--KYGNIHYVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHH--hcCCeEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 799999999988877655553 123577889999999999887764
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|.+||++|.+.
T Consensus 77 ~~~~~id~ii~~ag~~~ 93 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYV 93 (238)
T ss_pred HHhCCCCEEEEcCCCcC
Confidence 489999998654
No 188
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.54 E-value=3.4e-07 Score=87.72 Aligned_cols=95 Identities=25% Similarity=0.314 Sum_probs=77.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|+|+||||++|++++++|.+++ ++|.++.|+.++..... .++++...|+.++.++...+++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~-------~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG-------HEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC-------CEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhcccc
Confidence 479999999999999999999997 89999999999986543 368899999999999999999999
Q ss_pred eeEeccCCCC-------CCcHHHHHHHHHcC--C-cEEec
Q 014694 91 LLLNCVGPYR-------LHGDPVAAACVHSG--C-DYLDI 120 (420)
Q Consensus 91 vVIn~aGp~~-------~~~~~vv~Ac~~~g--~-~yvdi 120 (420)
.++++.+... .....+++++.+++ . |++.+
T Consensus 66 ~~~~i~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~~~~~ 105 (275)
T COG0702 66 GVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSL 105 (275)
T ss_pred EEEEEecccccccchhHHHHHHHHHHHHHhcCCceEEEEe
Confidence 9998888443 12355666666655 3 55554
No 189
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.54 E-value=4.2e-07 Score=85.81 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=67.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.+|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++..+.+|+.|+++++++++
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLG-------ATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999999999888776642 12346678899999999988764
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
+.|++||++|.
T Consensus 78 ~~~g~~iD~li~nag~ 93 (227)
T PRK08862 78 QQFNRAPDVLVNNWTS 93 (227)
T ss_pred HHhCCCCCEEEECCcc
Confidence 57999999984
No 190
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.54 E-value=4e-07 Score=86.15 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=65.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..++|+||+|++|+.++++|++++ .++++. .|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEG-------AKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999987 677664 4566777666665531 123577899999999999998876
Q ss_pred ------cCeeEeccCCCC
Q 014694 89 ------TKLLLNCVGPYR 100 (420)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (420)
.|+||||+|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 79 VNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 699999999754
No 191
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.54 E-value=5.4e-07 Score=86.18 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=63.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++++|+.+.. +..+++.. ...++.++.+|+.|+++++++++
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G-------~~Vv~~~r~~~~~-~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 77 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHG-------ANLILLDISPEIE-KLADELCG-RGHRCTAVVADVRDPASVAAAIKRAK 77 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHH-HHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7899999987533 33333321 12356788999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~~~id~vi~~ag~~ 93 (263)
T PRK08226 78 EKEGRIDILVNNAGVC 93 (263)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999964
No 192
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.54 E-value=1e-06 Score=83.37 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=62.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||||++|+.++++|++++ .++++. +|+..+.++..+++.. ...++..+.+|+.|.+++.++++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDG-------FKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 468999999999999999999998 667664 4555555555554421 12345677899999999988775
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+||||+|...
T Consensus 76 ~~~~~~id~li~~ag~~~ 93 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITR 93 (246)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999643
No 193
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.54 E-value=4.1e-07 Score=86.16 Aligned_cols=80 Identities=16% Similarity=0.144 Sum_probs=64.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+|++|+.++++|++++ .++++. .|+.++++.+.+++.. ...++.++.+|+.|++++.++++
T Consensus 4 ~ilItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06947 4 VVLITGASRGIGRATAVLAAARG-------WSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAVQ 75 (248)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 69999999999999999999987 677665 4677777666665532 12357789999999999887765
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (248)
T PRK06947 76 SAFGRLDALVNNAGIV 91 (248)
T ss_pred HhcCCCCEEEECCccC
Confidence 479999999964
No 194
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.54 E-value=3.3e-07 Score=87.40 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|+.++++|++++ .+ |++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERG-------AAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVEDCRRVVAAA 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999987 56 99999998887766655531 12356778999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
++|+|||++|..
T Consensus 79 ~~~~g~id~li~~ag~~ 95 (260)
T PRK06198 79 DEAFGRLDALVNAAGLT 95 (260)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 469999999964
No 195
>PRK09242 tropinone reductase; Provisional
Probab=98.53 E-value=3.5e-07 Score=87.29 Aligned_cols=82 Identities=23% Similarity=0.228 Sum_probs=67.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ ++|++++|+.++++++.+++... ...++.++.+|+.|++++.+++.
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLG-------ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999999888777766420 12356788999999998887765
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 83 ~~~~g~id~li~~ag~~ 99 (257)
T PRK09242 83 EDHWDGLHILVNNAGGN 99 (257)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999963
No 196
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.53 E-value=4.2e-07 Score=86.05 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=62.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.+|+|+||+|++|+.++++|++++ ++|++.+|+.. ++.+..+++ ..++.++.+|++|++++.++++
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 74 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAG-------ADIVGAGRSEPSETQQQVEAL----GRRFLSLTADLSDIEAIKALVDSA 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 78999999752 222223322 2457889999999999987765
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 75 ~~~~~~~d~li~~ag~~~ 92 (248)
T TIGR01832 75 VEEFGHIDILVNNAGIIR 92 (248)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4799999999643
No 197
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.52 E-value=4.7e-07 Score=85.67 Aligned_cols=80 Identities=24% Similarity=0.169 Sum_probs=62.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ .++++.. |++++++.+.+.+.. ...++.++.+|++|.+++.++++
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERG-------YAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 59999999999999999999987 5677766 556666665555421 12346688999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 76 ~~~~~id~li~~ag~~ 91 (248)
T PRK06123 76 RELGRLDALVNNAGIL 91 (248)
T ss_pred HHhCCCCEEEECCCCC
Confidence 469999999975
No 198
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.52 E-value=5.7e-07 Score=84.85 Aligned_cols=82 Identities=12% Similarity=0.193 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC-- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d--~~sl~~~~-- 86 (420)
.+++|+||+|++|+.+++.|++++ .+|++.+|+.++++++.+++......++.++.+|+.| .+++.+++
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAG-------ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAAT 79 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHH
Confidence 479999999999999999999987 7899999999988877776532112346678899875 34555443
Q ss_pred ------hccCeeEeccCCC
Q 014694 87 ------SQTKLLLNCVGPY 99 (420)
Q Consensus 87 ------~~~dvVIn~aGp~ 99 (420)
...|+|||++|..
T Consensus 80 i~~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 80 IAEATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHHHhCCCCCEEEEecccc
Confidence 3579999999953
No 199
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.52 E-value=6.9e-07 Score=85.28 Aligned_cols=79 Identities=18% Similarity=0.172 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+++||+.++++|++++ ++|++.+|+.. ++.+..++. ..++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAG-------ADIVGVGVAEAPETQAQVEAL----GRKFHFITADLIQQKDIDSIVSQA 77 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHc----CCeEEEEEeCCCCHHHHHHHHHHH
Confidence 469999999999999999999998 78988888643 333333332 2467789999999999999876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||++|...
T Consensus 78 ~~~~g~iD~lv~~ag~~~ 95 (251)
T PRK12481 78 VEVMGHIDILINNAGIIR 95 (251)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4699999999654
No 200
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.51 E-value=4.1e-07 Score=86.57 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=61.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|++|+.++++|++++ .+|++++|+.++. . ...++.++.+|+.|++++.+++++
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g-------~~v~~~~r~~~~~------~---~~~~~~~~~~D~~~~~~~~~~~~~~ 69 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAG-------ATVVVCGRRAPET------V---DGRPAEFHAADVRDPDQVAALVDAI 69 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCChhhh------h---cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999987 7899999987651 1 124577899999999999988764
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 70 ~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 70 VERHGRLDVLVNNAGGS 86 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 49999999964
No 201
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.51 E-value=3.3e-07 Score=87.58 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=65.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHH----hCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALK----LFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~----~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
.++|+||++++|+.++++|++ .+ .+|++.+|+.++++++.+++... ...++.++.+|++|++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~ 74 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG-------SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLL 74 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC-------cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHH
Confidence 489999999999999999997 34 78999999999998888777420 1235678899999999998887
Q ss_pred hcc-----------CeeEeccCCC
Q 014694 87 SQT-----------KLLLNCVGPY 99 (420)
Q Consensus 87 ~~~-----------dvVIn~aGp~ 99 (420)
+.+ ++|||++|..
T Consensus 75 ~~~~~~~g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 75 KALRELPRPKGLQRLLLINNAGTL 98 (256)
T ss_pred HHHHhccccCCCceEEEEeCCccc
Confidence 532 4899999964
No 202
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.51 E-value=4.8e-07 Score=89.49 Aligned_cols=85 Identities=20% Similarity=0.169 Sum_probs=72.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|||||..||..+|+.|+.++ .+|++++||.++.++.++++.. ....++.++++|+.|..++.+++.
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~G-------a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRG-------AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999998888888764 223456779999999999999886
Q ss_pred ------ccCeeEeccCCCCC
Q 014694 88 ------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~ 101 (420)
..|++||+||.+..
T Consensus 108 ~~~~~~~ldvLInNAGV~~~ 127 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAP 127 (314)
T ss_pred HHhcCCCccEEEeCcccccC
Confidence 36999999997654
No 203
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.51 E-value=5.7e-07 Score=84.80 Aligned_cols=81 Identities=19% Similarity=0.144 Sum_probs=63.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ +++++..|+ .+..+++.+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADG-------FAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDAA 77 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 677776665 3445555554421 23467889999999999999887
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (245)
T PRK12937 78 ETAFGRIDVLVNNAGVM 94 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
No 204
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.50 E-value=6.6e-07 Score=88.57 Aligned_cols=82 Identities=22% Similarity=0.165 Sum_probs=68.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||++.||+.+++.|++++. ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 76 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGE------WHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFR 76 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3799999999999999999999872 6899999999988888777642 12356778899999999988775
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|++||+||.+
T Consensus 77 ~~~~~iD~lI~nAG~~ 92 (314)
T TIGR01289 77 ESGRPLDALVCNAAVY 92 (314)
T ss_pred HhCCCCCEEEECCCcc
Confidence 479999999964
No 205
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.50 E-value=3.6e-07 Score=86.15 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i-agRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.++|+||+|++|+.+++.|++++ ++|++ ..|+.+++++...++.. ...++.++.+|+.|++++++++++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~ 74 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEG-------YTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAID 74 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 58999999999999999999987 67766 46887777666655431 123567899999999999998775
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 75 QHDEPLAALVNNAGIL 90 (247)
T ss_pred HhCCCCCEEEECCCCC
Confidence 47999999964
No 206
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.50 E-value=5.5e-07 Score=84.76 Aligned_cols=76 Identities=13% Similarity=0.164 Sum_probs=61.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++..+.++.. ++.++.+|+.|++++.+++.+
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQG-------QPVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 79999999876543333322 357889999999998887653
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|++||++|..
T Consensus 70 ~~~~~id~lv~~ag~~ 85 (236)
T PRK06483 70 QHTDGLRAIIHNASDW 85 (236)
T ss_pred hhCCCccEEEECCccc
Confidence 79999999964
No 207
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.50 E-value=6.9e-07 Score=87.19 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=66.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
...++|+||++.||+.+++.|++++ .++++.+|+. ++++++.+++.. ...++.++.+|++|++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G-------~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 77 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWD 77 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHH
Confidence 3479999999999999999999988 7888888876 677777766632 1235667889999999
Q ss_pred HHHHHHh-------ccCeeEeccCCCC
Q 014694 81 SLHRLCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (420)
++.++++ ..|++||++|...
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9888775 4699999999753
No 208
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.49 E-value=7.7e-07 Score=84.37 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=65.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC--CHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT--DPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~--d~~sl~~~~ 86 (420)
+...++|+||+|++|..++++|++.+ ++|++.+|+.++++++.+++......++.++.+|++ +++++.+++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHG-------ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-------CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 44579999999999999999999987 789999999988877776664211235667888886 566665554
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ ..|+|||++|..
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLL 103 (247)
T ss_pred HHHHHHhCCCCEEEECCccc
Confidence 3 579999999863
No 209
>PRK06720 hypothetical protein; Provisional
Probab=98.49 E-value=9.3e-07 Score=79.85 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||++++|+.+++.|++.+ .+|.+.+|+.+.++...+++.. ...+..++.+|++|.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQG-------AKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999987 7899999998887766666531 12345678999999998888664
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|++||++|.+.
T Consensus 88 ~~~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYK 105 (169)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 5899999999654
No 210
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.49 E-value=6.5e-07 Score=85.12 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=64.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+|++|++++++|++++ .+|++++|+.+.. +...++. ..++..+.+|+.|++++.+++.
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G-------~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKG-------ARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHHHHHHHHHHH
Confidence 3479999999999999999999988 7899999987653 3334332 2345688999999999988876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 84 ~~~~~~~d~vi~~ag~~~ 101 (255)
T PRK06841 84 ISAFGRIDILVNSAGVAL 101 (255)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4699999999643
No 211
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.49 E-value=9.5e-07 Score=81.34 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=78.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+||||.+|+.+++.|++.+ .+|.+.+|+.++++++.+.+.. ..+..+..+|..|.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g-------~~V~l~~R~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREG-------ARVVLVGRDLERAQKAADSLRA--RFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh--hcCCcEEEeeCCCHHHHHHHHhc
Confidence 34589999999999999999999877 6899999999999888776631 12456777899999999999999
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
+|+||++..-.. +.....+.+.+.+.-.+|+.-.++.-
T Consensus 98 ~diVi~at~~g~-~~~~~~~~~~~~~~vv~D~~~~~~~~ 135 (194)
T cd01078 98 ADVVFAAGAAGV-ELLEKLAWAPKPLAVAADVNAVPPVG 135 (194)
T ss_pred CCEEEECCCCCc-eechhhhcccCceeEEEEccCCCCCC
Confidence 999999764322 21112222222244577776544443
No 212
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.49 E-value=5.9e-07 Score=84.43 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=63.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ +++++..| +.+++++..+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDG-------YRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999988 78888887 66666655544421 12467789999999999888765
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 74 ~~~~~id~vi~~ag~~ 89 (242)
T TIGR01829 74 AELGPIDVLVNNAGIT 89 (242)
T ss_pred HHcCCCcEEEECCCCC
Confidence 479999999864
No 213
>PRK12742 oxidoreductase; Provisional
Probab=98.48 E-value=8.6e-07 Score=83.24 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=61.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
..|+|+||+|++|+.++++|++++ .++++..| +.++++++.+++ ++.++.+|++|.+++.+.++.
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~~ 73 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDG-------ANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRKS 73 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHHh
Confidence 479999999999999999999987 67877765 566666665544 246788999999988888764
Q ss_pred --cCeeEeccCCC
Q 014694 89 --TKLLLNCVGPY 99 (420)
Q Consensus 89 --~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 74 ~~id~li~~ag~~ 86 (237)
T PRK12742 74 GALDILVVNAGIA 86 (237)
T ss_pred CCCcEEEECCCCC
Confidence 79999999964
No 214
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.48 E-value=1.2e-06 Score=93.62 Aligned_cols=111 Identities=10% Similarity=0.130 Sum_probs=77.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhC---------C--C------CCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS---------P--S------HSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~---------~--~------~~~~ 68 (420)
+...|+|||||||+|+.+++.|++..+. ..+|.+..|..+ ..+++.+++. . . ...+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~----v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPD----VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCC----CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 4568999999999999999999987632 147888888542 2222221210 0 0 1246
Q ss_pred ccEEEEeCCCH------HHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcC-C-cEEecCCc
Q 014694 69 IPILTADTTDP------PSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSG-C-DYLDISGE 123 (420)
Q Consensus 69 ~~~i~~D~~d~------~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g-~-~yvdisge 123 (420)
+.++.+|++++ +..+.+.+++|+|||+|+..... ..+++++|.+.+ . +++.+|..
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa 269 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA 269 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence 78899999986 46677778899999999976532 177888888764 3 46666643
No 215
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.48 E-value=7.5e-07 Score=85.13 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=63.2
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++..+++. ..++.++.+|++|+++++++++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G-------~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~ 76 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQG-------ATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFAT 76 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHH
Confidence 479999999 799999999999998 7899999984 4444455543 2356789999999999988765
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 77 ~~~~~g~iD~lv~nAg~~ 94 (252)
T PRK06079 77 IKERVGKIDGIVHAIAYA 94 (252)
T ss_pred HHHHhCCCCEEEEccccc
Confidence 479999999964
No 216
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.48 E-value=4.4e-07 Score=85.03 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=62.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
|+|+|++|++|+.++++|++++ +++++++|+. ++++.+.+.+.. ...++.++.+|++|+++++++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG-------AKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999987 7899998875 455555444421 123567899999999999888764
Q ss_pred ----cCeeEeccCCC
Q 014694 89 ----TKLLLNCVGPY 99 (420)
Q Consensus 89 ----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 73 ~~~~id~vi~~ag~~ 87 (239)
T TIGR01830 73 ELGPIDILVNNAGIT 87 (239)
T ss_pred HhCCCCEEEECCCCC
Confidence 59999999964
No 217
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.48 E-value=5.7e-07 Score=86.50 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=61.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH----HHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLH----RLC 86 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~----~~~ 86 (420)
.++|+||+|+||+.+++.|++++ .+|++.+| +.++++++.+++......++.++.+|++|.+++. +++
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~ 75 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEG-------YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAII 75 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCC-------CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHH
Confidence 68999999999999999999988 78887664 5677777776663211224557889999987553 333
Q ss_pred -------hccCeeEeccCCC
Q 014694 87 -------SQTKLLLNCVGPY 99 (420)
Q Consensus 87 -------~~~dvVIn~aGp~ 99 (420)
...|+|||++|.+
T Consensus 76 ~~~~~~~g~iD~lv~nAG~~ 95 (267)
T TIGR02685 76 DACFRAFGRCDVLVNNASAF 95 (267)
T ss_pred HHHHHccCCceEEEECCccC
Confidence 2589999999964
No 218
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.47 E-value=4.6e-07 Score=87.69 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=60.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|+|+|||||+|++++++|++.+ ++|.+.+|+.++..... .....|+.+ ..+.+.+.++|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG-------HEVTILTRSPPAGANTK-----------WEGYKPWAP-LAESEALEGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC-------CEEEEEeCCCCCCCccc-----------ceeeecccc-cchhhhcCCCCEE
Confidence 6899999999999999999987 89999999887643211 001123322 4456677899999
Q ss_pred EeccCCCCCC------------------cHHHHHHHHHcCC
Q 014694 93 LNCVGPYRLH------------------GDPVAAACVHSGC 115 (420)
Q Consensus 93 In~aGp~~~~------------------~~~vv~Ac~~~g~ 115 (420)
|||+|..... ..+++++|.++++
T Consensus 62 vh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 102 (292)
T TIGR01777 62 INLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ 102 (292)
T ss_pred EECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence 9999964321 2567788887775
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.45 E-value=6.5e-07 Score=85.74 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=67.1
Q ss_pred cceEEEEcCCc-HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG-~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
...++|+||+| .+|+.+++.|++++ .+|++.+|+.+++++..+++... ...++.++.+|++|+++++++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEG-------ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 35799999997 69999999999988 78999999998887776655310 11356788999999999988876
Q ss_pred -------ccCeeEeccCCC
Q 014694 88 -------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 90 ~~~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 469999999953
No 220
>PRK12743 oxidoreductase; Provisional
Probab=98.45 E-value=8.8e-07 Score=84.59 Aligned_cols=81 Identities=15% Similarity=0.134 Sum_probs=64.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.++|+||+|++|+.++++|++++ ++|++..| +.++++.+.+++.. ...++.++.+|++|++++++++.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQG-------FDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999998 78877754 66666666655531 23467889999999999888776
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 76 ~~~~~id~li~~ag~~~ 92 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMT 92 (256)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4699999999643
No 221
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.45 E-value=7e-07 Score=96.91 Aligned_cols=81 Identities=20% Similarity=0.186 Sum_probs=69.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||||++|+.+++.|++++ .+|++.+|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 372 k~vlItGas~giG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~ 443 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAG-------ATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDIL 443 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999999998887776631 12457789999999999998877
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 444 ~~~g~id~li~~Ag~~ 459 (657)
T PRK07201 444 AEHGHVDYLVNNAGRS 459 (657)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
No 222
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.45 E-value=6.8e-07 Score=88.87 Aligned_cols=82 Identities=20% Similarity=0.226 Sum_probs=62.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCC--HHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTD--PPSLHRL-- 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d--~~sl~~~-- 85 (420)
..++|+||||+||+.++++|+++| .+|++++|+.++++++.+++... ...++..+.+|+++ .+.++++
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKG-------LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHH
Confidence 469999999999999999999998 78999999999998888776421 11346678899985 3444443
Q ss_pred -Hhc--cCeeEeccCCC
Q 014694 86 -CSQ--TKLLLNCVGPY 99 (420)
Q Consensus 86 -~~~--~dvVIn~aGp~ 99 (420)
+.+ .|++||+||..
T Consensus 127 ~~~~~didilVnnAG~~ 143 (320)
T PLN02780 127 TIEGLDVGVLINNVGVS 143 (320)
T ss_pred HhcCCCccEEEEecCcC
Confidence 333 45999999964
No 223
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.45 E-value=7.1e-07 Score=87.29 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=64.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
+.++|+||+|++|..++++|++++ .+|++.+|+.+ .++.+.+.+.. ...++.++.+|+.|.++++++++
T Consensus 47 k~iLItGasggIG~~la~~l~~~G-------~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEG-------ADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 479999999999999999999998 78999999753 34444444421 12356789999999999988876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 119 ~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 119 VRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHcCCCCEEEECCccc
Confidence 469999999964
No 224
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.44 E-value=9e-07 Score=82.68 Aligned_cols=74 Identities=24% Similarity=0.264 Sum_probs=62.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+||+|++|++++++|++++ .++++++|+.++++++.. .++.++.+|++|.+++++++.
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADG-------WRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcC
Confidence 68999999999999999999887 789999999888765542 135689999999999988753
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 69 ~~~d~vi~~ag~~ 81 (222)
T PRK06953 69 EALDAAVYVAGVY 81 (222)
T ss_pred CCCCEEEECCCcc
Confidence 379999999976
No 225
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.44 E-value=8.6e-07 Score=84.75 Aligned_cols=75 Identities=15% Similarity=0.035 Sum_probs=60.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..++|+||+|++|+.+++.|++++ .+|++.+|+.. .++. ... .....+.+|++|.+++.+.+.+.
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G-------~~Vi~~~r~~~~~~~~---~~~----~~~~~~~~D~~~~~~~~~~~~~i 80 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKG-------AKVIGLTHSKINNSES---NDE----SPNEWIKWECGKEESLDKQLASL 80 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEECCchhhhhh---hcc----CCCeEEEeeCCCHHHHHHhcCCC
Confidence 479999999999999999999998 78999999863 3221 111 12256889999999999999999
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|++|||||..
T Consensus 81 DilVnnAG~~ 90 (245)
T PRK12367 81 DVLILNHGIN 90 (245)
T ss_pred CEEEECCccC
Confidence 9999999964
No 226
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.44 E-value=1.1e-06 Score=83.68 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=62.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+++++.|++.+ .+|++.+ |+.+++++..+++.. ...++..+.+|+.|.+++..++.
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSSL 76 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHHH
Confidence 479999999999999999999988 7888764 666777666655531 12345678899999887766543
Q ss_pred -----------ccCeeEeccCCC
Q 014694 88 -----------QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----------~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 77 ~~~~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 77 DNELQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred HHHhhhhcCCCCCCEEEECCCcC
Confidence 579999999953
No 227
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.44 E-value=6.2e-07 Score=85.04 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=61.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++|+||+|++|+.++++|++++ ++|++.+|+. +.++.+.+.. ..++.++.+|++|+++++++++++.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (251)
T PRK06924 3 YVIITGTSQGLGEAIANQLLEKG-------THVISISRTENKELTKLAEQY----NSNLTFHSLDLQDVHELETNFNEIL 71 (251)
T ss_pred EEEEecCCchHHHHHHHHHHhcC-------CEEEEEeCCchHHHHHHHhcc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 7899999987 4555444332 2467789999999999999887431
Q ss_pred -----------eeEeccCCC
Q 014694 91 -----------LLLNCVGPY 99 (420)
Q Consensus 91 -----------vVIn~aGp~ 99 (420)
++||++|..
T Consensus 72 ~~~~~~~~~~~~~v~~ag~~ 91 (251)
T PRK06924 72 SSIQEDNVSSIHLINNAGMV 91 (251)
T ss_pred HhcCcccCCceEEEEcceec
Confidence 688988853
No 228
>PRK06398 aldose dehydrogenase; Validated
Probab=98.44 E-value=6.5e-07 Score=85.82 Aligned_cols=70 Identities=16% Similarity=0.099 Sum_probs=60.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.++. .++.++.+|++|+++++++++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~ 67 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEG-------SNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVI 67 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7899999986442 246789999999999988876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 68 ~~~~~id~li~~Ag~~ 83 (258)
T PRK06398 68 SKYGRIDILVNNAGIE 83 (258)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999863
No 229
>PRK06484 short chain dehydrogenase; Validated
Probab=98.44 E-value=8.8e-07 Score=93.46 Aligned_cols=79 Identities=20% Similarity=0.131 Sum_probs=68.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~- 88 (420)
...++|+||+|+||+.+++.|++++ .+|++.+|+.++++++.++++ .+...+.+|++|+++++++++.
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAG-------DRLLIIDRDAEGAKKLAEALG----DEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999988877663 3456789999999999988763
Q ss_pred ------cCeeEeccCCC
Q 014694 89 ------TKLLLNCVGPY 99 (420)
Q Consensus 89 ------~dvVIn~aGp~ 99 (420)
.|+||||||..
T Consensus 338 ~~~~g~id~li~nAg~~ 354 (520)
T PRK06484 338 QARWGRLDVLVNNAGIA 354 (520)
T ss_pred HHHcCCCCEEEECCCCc
Confidence 69999999964
No 230
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.44 E-value=1.4e-06 Score=83.59 Aligned_cols=86 Identities=17% Similarity=0.117 Sum_probs=64.4
Q ss_pred CCCCCCCCCcceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhCCCCCCCccEEEEe
Q 014694 1 MQAQSQIPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTAD 75 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~~~~~~~~~~i~~D 75 (420)
|+....+. ...++|+||+ +.||+.++++|++++ .+|++.+|+.+. ++++.+++. ...++.+|
T Consensus 2 ~~~~~~~~-~k~~lItGas~g~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~D 68 (258)
T PRK07533 2 MQPLLPLA-GKRGLVVGIANEQSIAWGCARAFRALG-------AELAVTYLNDKARPYVEPLAEELD-----APIFLPLD 68 (258)
T ss_pred CCcccccC-CCEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHHHhhc-----cceEEecC
Confidence 44333333 3479999998 489999999999988 789999998643 344444332 34578899
Q ss_pred CCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 76 TTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 76 ~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
++|+++++++++ ..|++|||||..
T Consensus 69 ~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 69 VREPGQLEAVFARIAEEWGRLDFLLHSIAFA 99 (258)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEcCccC
Confidence 999999988765 469999999964
No 231
>PRK06128 oxidoreductase; Provisional
Probab=98.44 E-value=7.9e-07 Score=87.28 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=62.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.++++|++++ .+|++..|+.+ .++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREG-------ADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHH
Confidence 479999999999999999999998 78888777543 33444443321 12356788999999999888876
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 128 ~~~~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQ 145 (300)
T ss_pred HHHHhCCCCEEEECCccc
Confidence 479999999953
No 232
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.43 E-value=9.3e-07 Score=85.72 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=63.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.++|+|| |+||+++++.|+ ++ .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G-------~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AG-------KKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 5899998 689999999995 56 7899999999888777766642 12356788999999999998876
Q ss_pred --ccCeeEeccCCC
Q 014694 88 --QTKLLLNCVGPY 99 (420)
Q Consensus 88 --~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 74 ~g~id~li~nAG~~ 87 (275)
T PRK06940 74 LGPVTGLVHTAGVS 87 (275)
T ss_pred cCCCCEEEECCCcC
Confidence 479999999964
No 233
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.43 E-value=6.7e-07 Score=84.56 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=60.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
++++|+||||++|+.++++|++++ +++++++|+.++. +.+.. ..++.++.+|+.|.+++++++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G-------~~v~~~~r~~~~~--~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 68 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG-------IAVLGVARSRHPS--LAAAA----GERLAEVELDLSDAAAAAAWLAGDL 68 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC-------CEEEEEecCcchh--hhhcc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999987642 11211 2357789999999999988543
Q ss_pred --------ccCeeEeccCCCC
Q 014694 88 --------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 --------~~dvVIn~aGp~~ 100 (420)
..|++||++|...
T Consensus 69 ~~~~~~~~~~~~~v~~ag~~~ 89 (243)
T PRK07023 69 LAAFVDGASRVLLINNAGTVE 89 (243)
T ss_pred HHHhccCCCceEEEEcCcccC
Confidence 3579999999654
No 234
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.42 E-value=9.1e-07 Score=84.46 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=60.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ ++|++++|+.++. . ..++.++.+|+.|+++++++++
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAG-------ARVVTTARSRPDD------L----PEGVEFVAADLTTAEGCAAVARAVL 72 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCC-------CEEEEEeCChhhh------c----CCceeEEecCCCCHHHHHHHHHHHH
Confidence 579999999999999999999988 7899999986542 1 2356789999999998887664
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 73 ~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 73 ERLGGVDILVHVLGGS 88 (260)
T ss_pred HHcCCCCEEEECCccc
Confidence 469999999953
No 235
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.42 E-value=9.5e-07 Score=84.52 Aligned_cols=81 Identities=15% Similarity=0.069 Sum_probs=63.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.+++.|++++ .++++..|+ .++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G-------~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEK-------AKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHH
Confidence 479999999999999999999988 788888885 4455555555431 12356788999999999888776
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 80 ~~~~g~id~lv~~ag~~ 96 (261)
T PRK08936 80 VKEFGTLDVMINNAGIE 96 (261)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999964
No 236
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.42 E-value=1e-06 Score=86.85 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=66.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++|+||+|+||+.++++|++++ .+|++.+|+ .++++++.+++.. ...++.++.+|+.|.+++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~G-------a~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLG-------ATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHH
Confidence 3479999999999999999999998 788888875 4556666665531 23457789999999999998876
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 84 ~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999653
No 237
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.42 E-value=1.5e-06 Score=82.96 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=60.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|++|+.++++|++++ .+|++..|+.+ .++++.+ .++.++.+|++|++++.++++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~~ 73 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREG-------AKVAVLYNSAENEAKELRE-------KGVFTIKCDVGNRDQVKKSKEVV 73 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHHHH
Confidence 579999999999999999999988 78887776543 3333321 246789999999999999876
Q ss_pred -----ccCeeEeccCCC
Q 014694 88 -----QTKLLLNCVGPY 99 (420)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (420)
+.|+||||+|..
T Consensus 74 ~~~~~~id~li~~ag~~ 90 (255)
T PRK06463 74 EKEFGRVDVLVNNAGIM 90 (255)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999864
No 238
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.42 E-value=1.3e-06 Score=83.44 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=61.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+|++|+.++++|++++ +++++..++ .++++++.+++.. ...++.++.+|++|++++++++
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G-------~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQG-------AKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHHH
Confidence 479999999999999999999987 675555543 3445555554421 1235778899999999999887
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|+|||++|..
T Consensus 81 ~~~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHHHhhCCCCEEEECCccc
Confidence 6 479999999963
No 239
>PRK08017 oxidoreductase; Provisional
Probab=98.41 E-value=1.1e-06 Score=83.43 Aligned_cols=74 Identities=26% Similarity=0.209 Sum_probs=61.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~---- 87 (420)
.|+|+||+|++|+.++++|++++ .+|++.+|+.++++.+.+ .++..+.+|+.|.+++.++++
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRG-------YRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHH
Confidence 69999999999999999999987 789999999988765432 146788999999988777654
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|.+||++|..
T Consensus 70 ~~~~~~~~ii~~ag~~ 85 (256)
T PRK08017 70 LTDNRLYGLFNNAGFG 85 (256)
T ss_pred hcCCCCeEEEECCCCC
Confidence 357899999853
No 240
>PRK08324 short chain dehydrogenase; Validated
Probab=98.40 E-value=2.7e-06 Score=93.04 Aligned_cols=81 Identities=15% Similarity=0.089 Sum_probs=69.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.+++.|++++ .+|++++|+.++++.+.++++. ..++.++.+|++|++++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~G-------a~Vvl~~r~~~~~~~~~~~l~~--~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEG-------ACVVLADLDEEAAEAAAAELGG--PDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHhc--cCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999987 7899999999998887777642 1367789999999999988876
Q ss_pred ----ccCeeEeccCCCC
Q 014694 88 ----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 494 ~~~g~iDvvI~~AG~~~ 510 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAI 510 (681)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999999643
No 241
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.40 E-value=8.6e-07 Score=84.99 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=61.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++ ..++.++.+|++|+++++++++
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANG-------ANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEII 72 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 79999999876642 2356788999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+|||++|..
T Consensus 73 ~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 73 EKFGRIDGLVNNAGIN 88 (266)
T ss_pred HHcCCCCEEEECCccc
Confidence 369999999964
No 242
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.40 E-value=6.1e-07 Score=87.58 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=62.8
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--ccCe
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QTKL 91 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~~dv 91 (420)
+|+|||||+|++++++|++.+ ..+.++.+. ..+|+.|.++++++++ ++|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g-------~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALG-------FTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCC-------CcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCE
Confidence 589999999999999999987 455544221 1368999999999887 4699
Q ss_pred eEeccCCCCC------C-----------cHHHHHHHHHcCC-cEEecCCc
Q 014694 92 LLNCVGPYRL------H-----------GDPVAAACVHSGC-DYLDISGE 123 (420)
Q Consensus 92 VIn~aGp~~~------~-----------~~~vv~Ac~~~g~-~yvdisge 123 (420)
|||||++... . ..+++++|.++++ ++|.+|..
T Consensus 53 Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~ 102 (306)
T PLN02725 53 VILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSS 102 (306)
T ss_pred EEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCce
Confidence 9999986421 1 2678999999987 67777653
No 243
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.40 E-value=1.7e-06 Score=83.01 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=63.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+|+. +.++++.+++. .++.++.+|++|++++++++
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~i~~~~ 76 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQG-------AEVVLTGFGRALRLTERIAKRLP----EPAPVLELDVTNEEHLASLA 76 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCC-------CEEEEecCccchhHHHHHHHhcC----CCCcEEeCCCCCHHHHHHHH
Confidence 47999999 8999999999999988 7899998864 44566655553 25678999999999998886
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ +.|++||++|..
T Consensus 77 ~~~~~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 77 DRVREHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHHHHHcCCCcEEEEccccc
Confidence 5 479999999964
No 244
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.40 E-value=1.6e-06 Score=81.67 Aligned_cols=80 Identities=16% Similarity=0.075 Sum_probs=62.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~-kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
.++|+||+|++|+.+++.|++++ .+|++.+|+.. ..++..+.+.. ...++.++.+|+.|.+++.+++++
T Consensus 4 ~vlItG~s~~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 4 IALVTGAKRGIGSAIARELLNDG-------YRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred EEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 69999999999999999999987 78999999853 33333333321 224578899999999998887763
Q ss_pred -----cCeeEeccCCC
Q 014694 89 -----TKLLLNCVGPY 99 (420)
Q Consensus 89 -----~dvVIn~aGp~ 99 (420)
.|+|||++|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (245)
T PRK12824 76 EEEGPVDILVNNAGIT 91 (245)
T ss_pred HHcCCCCEEEECCCCC
Confidence 79999999853
No 245
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.39 E-value=1.7e-06 Score=83.47 Aligned_cols=80 Identities=13% Similarity=0.137 Sum_probs=62.0
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||++ .||+.+++.|++++ .+|++.+|+ +++++.++++.. .......+.+|++|+++++++++
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G-------~~vil~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 77 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQN-DKLKGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAE 77 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCC-------CEEEEEecc-hhHHHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHH
Confidence 4799999985 89999999999998 789998997 344444444431 11245678899999999999875
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
+.|++||++|..
T Consensus 78 ~~~~~g~iD~linnAg~~ 95 (262)
T PRK07984 78 LGKVWPKFDGFVHSIGFA 95 (262)
T ss_pred HHhhcCCCCEEEECCccC
Confidence 369999999954
No 246
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.39 E-value=1.7e-06 Score=94.43 Aligned_cols=83 Identities=16% Similarity=0.104 Sum_probs=68.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..++|+||+|+||+.++++|++++ .+|++++|+.++++.+.+++... ....+..+.+|++|++++.++++
T Consensus 415 kvvLVTGasggIG~aiA~~La~~G-------a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEG-------AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 79999999998887766655310 11245678999999999998887
Q ss_pred -----ccCeeEeccCCCC
Q 014694 88 -----QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (420)
+.|+|||+||...
T Consensus 488 ~~~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIAT 505 (676)
T ss_pred HHhcCCCcEEEECCCCCC
Confidence 5799999999643
No 247
>PRK06484 short chain dehydrogenase; Validated
Probab=98.38 E-value=1.5e-06 Score=91.67 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=67.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
...++|+||+++||+.+++.|++++ .+|++.+|+.++++++.++++ .++..+.+|++|++++.++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAG-------DQVVVADRNVERARERADSLG----PDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEeccCCHHHHHHHHHHH
Confidence 3479999999999999999999998 789999999999888877663 356679999999999988875
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 74 ~~~~g~iD~li~nag~ 89 (520)
T PRK06484 74 HREFGRIDVLVNNAGV 89 (520)
T ss_pred HHHhCCCCEEEECCCc
Confidence 47999999986
No 248
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.38 E-value=1.4e-06 Score=86.01 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=63.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~----------~kl~~~~~~l~~~~~~~~~~i~~D~~d~~ 80 (420)
..++|+||++.||+.+++.|++.+ .+|++++|+. ++++++.+.+.. ...++.++.+|+.|++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 80 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAG-------ATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVPE 80 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCHH
Confidence 479999999999999999999988 7899999983 455555554431 1234567899999999
Q ss_pred HHHHHHh-------ccCeeEecc-C
Q 014694 81 SLHRLCS-------QTKLLLNCV-G 97 (420)
Q Consensus 81 sl~~~~~-------~~dvVIn~a-G 97 (420)
+++++++ ..|++||++ |
T Consensus 81 ~v~~~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 81 QVRALVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHHHHHcCCccEEEECCcc
Confidence 9998875 469999999 6
No 249
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.38 E-value=1.2e-06 Score=83.74 Aligned_cols=100 Identities=16% Similarity=0.247 Sum_probs=75.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH-HHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-QWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~-~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.....+|+|+||.||||+|+|+.|..++ ..|++++.--.+.+..+ ..+. ...++++..|+.. ++
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~eg-------h~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~-----pl 88 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEG-------HEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVE-----PL 88 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcC-------CeEEEEecccccchhhcchhcc---CcceeEEEeechh-----HH
Confidence 3455799999999999999999999998 68888886433332222 2332 4567888888755 48
Q ss_pred HhccCeeEeccCCCCCC----------------cHHHHHHHHHcCCcEEecC
Q 014694 86 CSQTKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~~yvdis 121 (420)
+..+|-|+|.|.|.... ..+++..|++.+.+++..|
T Consensus 89 ~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~aR~l~aS 140 (350)
T KOG1429|consen 89 LKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLAS 140 (350)
T ss_pred HHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCceEEEee
Confidence 88899999999876432 2788999999998877765
No 250
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.37 E-value=2.1e-06 Score=81.21 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=60.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
..|+|+||+|++|++++++|++++ +++++..| +.+.+......+.. ...++.++.+|++|++++.++++
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEG-------SLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKAT 78 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHH
Confidence 479999999999999999999987 67777665 34444444333321 12345678899999999988876
Q ss_pred -----ccCeeEeccCC
Q 014694 88 -----QTKLLLNCVGP 98 (420)
Q Consensus 88 -----~~dvVIn~aGp 98 (420)
..|+|||++|.
T Consensus 79 ~~~~~~~d~vi~~ag~ 94 (252)
T PRK06077 79 IDRYGVADILVNNAGL 94 (252)
T ss_pred HHHcCCCCEEEECCCC
Confidence 46999999995
No 251
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.37 E-value=1.1e-06 Score=82.66 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=63.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc---
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~--- 88 (420)
|+|+||+|++|+.++++|++++ .++++.+|+ .++++.+.+++.. ...++.++.+|++|.+++.++++.
T Consensus 1 vlItGas~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG-------FEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 6899999999999999999988 788888764 5566666655531 134678899999999999887763
Q ss_pred ----cCeeEeccCCCC
Q 014694 89 ----TKLLLNCVGPYR 100 (420)
Q Consensus 89 ----~dvVIn~aGp~~ 100 (420)
.|++||++|...
T Consensus 73 ~~~~i~~li~~ag~~~ 88 (239)
T TIGR01831 73 EHGAYYGVVLNAGITR 88 (239)
T ss_pred HcCCCCEEEECCCCCC
Confidence 589999999643
No 252
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.35 E-value=2.6e-06 Score=82.69 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=61.3
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++++.++++ .. .++.+|++|.++++++
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G-------~~Vil~~r~~~~~~~~~~~~~~~~----~~-~~~~~Dv~d~~~v~~~ 73 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQG-------AELAFTYLNEALKKRVEPIAQELG----SD-YVYELDVSKPEHFKSL 73 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcC----Cc-eEEEecCCCHHHHHHH
Confidence 479999997 789999999999998 7899999985 34444444442 22 5788999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 74 ~~~i~~~~g~iDilVnnAG~~ 94 (274)
T PRK08415 74 AESLKKDLGKIDFIVHSVAFA 94 (274)
T ss_pred HHHHHHHcCCCCEEEECCccC
Confidence 75 469999999964
No 253
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.35 E-value=3.5e-06 Score=81.43 Aligned_cols=96 Identities=19% Similarity=0.123 Sum_probs=78.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
-.|+||||++.+|+.++.++++++ .++++.+.|.+..++..+++.. ..++...+||++|.+++.++++
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg-------~~~vl~Din~~~~~etv~~~~~--~g~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRG-------AKLVLWDINKQGNEETVKEIRK--IGEAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhC-------CeEEEEeccccchHHHHHHHHh--cCceeEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999998 6899999999888887777752 1367889999999999988876
Q ss_pred ----ccCeeEeccCCCCC-----CcHHHHHHHHHcCC
Q 014694 88 ----QTKLLLNCVGPYRL-----HGDPVAAACVHSGC 115 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~-----~~~~vv~Ac~~~g~ 115 (420)
..+++||+||.... ...+.++-|.+-++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~ 146 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNT 146 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhh
Confidence 47999999996432 34677777776544
No 254
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.34 E-value=2.4e-06 Score=82.04 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=63.9
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++++|+ .++++++.+++. ..++.++.+|++|+++++++
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G-------~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~ 77 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAG-------AKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITAC 77 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHHH
Confidence 479999997 899999999999998 789888765 356666666552 24567889999999999888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++|||+|..
T Consensus 78 ~~~~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 78 FETIKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred HHHHHHhCCCccEEEECcccC
Confidence 75 369999999854
No 255
>PLN00015 protochlorophyllide reductase
Probab=98.34 E-value=2e-06 Score=84.78 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=65.6
Q ss_pred EEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh------
Q 014694 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------ 87 (420)
Q Consensus 14 vV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------ 87 (420)
||+||++.||..+++.|++++. .+|++.+|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK------WHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 6899999999999999999872 6889999999988888777642 12356778999999999988875
Q ss_pred -ccCeeEeccCCC
Q 014694 88 -QTKLLLNCVGPY 99 (420)
Q Consensus 88 -~~dvVIn~aGp~ 99 (420)
..|+|||+||..
T Consensus 74 ~~iD~lInnAG~~ 86 (308)
T PLN00015 74 RPLDVLVCNAAVY 86 (308)
T ss_pred CCCCEEEECCCcC
Confidence 469999999964
No 256
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.34 E-value=2.3e-06 Score=81.67 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=60.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..++|+||+|+||+.++++|++++ .+|++.+|+.. ++..+++.. ...++..+.+|++|.++++++++
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G-------~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAG-------CDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 78887777532 122222211 12356778999999999998876
Q ss_pred ----ccCeeEeccCCC
Q 014694 88 ----QTKLLLNCVGPY 99 (420)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (420)
..|+||||+|..
T Consensus 81 ~~~~~~D~li~~Ag~~ 96 (253)
T PRK08993 81 AEFGHIDILVNNAGLI 96 (253)
T ss_pred HHhCCCCEEEECCCCC
Confidence 479999999964
No 257
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.33 E-value=3e-06 Score=82.09 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=61.1
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||+ +.||+.+++.|++++ .+|++.+|+. ++++++.++++ ....+.+|++|+++++++
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G-------~~V~l~~r~~~~~~~~~~l~~~~~-----~~~~~~~Dl~~~~~v~~~ 78 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAG-------AELAFTYQGDALKKRVEPLAAELG-----AFVAGHCDVTDEASIDAV 78 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHHHhcC-----CceEEecCCCCHHHHHHH
Confidence 479999997 799999999999998 7898888873 34444444432 245689999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 79 ~~~~~~~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 79 FETLEKKWGKLDFVVHAIGFS 99 (272)
T ss_pred HHHHHHhcCCCcEEEECCccc
Confidence 75 369999999964
No 258
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.33 E-value=2.9e-06 Score=81.57 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=60.3
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+|+. +.++.++++.. .......+.+|+.|+++++++++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G-------~~v~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQG-------AELAFTYVVD-KLEERVRKMAA-ELDSELVFRCDVASDDEINQVFAD 77 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCcH-HHHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHHH
Confidence 47999997 6799999999999998 7898887763 33333333321 11234578999999999998875
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
+.|++|||||...
T Consensus 78 ~~~~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAP 96 (261)
T ss_pred HHHHhCCCcEEEECCccCC
Confidence 4799999999753
No 259
>PRK07985 oxidoreductase; Provisional
Probab=98.33 E-value=1.7e-06 Score=84.77 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.+++.|++++ ++|++.+|+. ++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G-------~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREG-------ADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 479999999999999999999998 7888887653 344444433321 12356688999999998888765
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 122 ~~~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQ 139 (294)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 369999999853
No 260
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.32 E-value=2.5e-06 Score=80.87 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=61.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+. + .. ...++.++.+|+.|++++.+++++
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G-------~~v~~~~~~~--~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAG-------AKVIGFDQAF--L----TQ----EDYPFATFVLDVSDAAAVAQVCQRLL 71 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecch--h----hh----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999988 7999999986 1 11 124577899999999999998864
Q ss_pred -----cCeeEeccCCCC
Q 014694 89 -----TKLLLNCVGPYR 100 (420)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (420)
.|+|||++|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 72 AETGPLDVLVNAAGILR 88 (252)
T ss_pred HHcCCCCEEEECCCcCC
Confidence 699999999653
No 261
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.31 E-value=2.5e-06 Score=79.87 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=59.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
..|+|+||+|++|+.++++|++++ .+|++.+|+.++. . ...++.+|++|++++++++.
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~------~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLG-------HQVIGIARSAIDD------F------PGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCcccc------c------CceEEEeeCCCHHHHHHHHHHHH
Confidence 469999999999999999999988 7899999987541 1 12578999999999888876
Q ss_pred ---ccCeeEeccCCCC
Q 014694 88 ---QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (420)
++|+|||++|...
T Consensus 65 ~~~~~d~vi~~ag~~~ 80 (234)
T PRK07577 65 EIHPVDAIVNNVGIAL 80 (234)
T ss_pred HhCCCcEEEECCCCCC
Confidence 5799999999754
No 262
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.29 E-value=1.8e-06 Score=82.99 Aligned_cols=96 Identities=11% Similarity=0.219 Sum_probs=77.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
|+|+|+||||. |+.+++.|.+.+ ++|.+..|+....+.+.+ ....-+..+..|.+++.+++++
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g-------~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~~ 65 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG-------IEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRHS 65 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhcC
Confidence 57999999999 999999999887 789888888765433221 1123455677788889888874
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
.|+||+++.||.. ...++.++|.+.|+.|+.+-
T Consensus 66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 66 IDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 8999999999864 46899999999999999983
No 263
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.29 E-value=3.3e-06 Score=81.79 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=60.0
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl---~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+||++ .||+.+++.|++++ .+|++.+|+.... +++.++++ ....+.+|++|+++++++
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~g-----~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQG-------AELAFTYQGEALGKRVKPLAESLG-----SDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCC-------CEEEEecCchHHHHHHHHHHHhcC-----CceEEeCCCCCHHHHHHH
Confidence 3699999996 99999999999998 7999999986433 22222221 224688999999999888
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||+||..
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHHHHHHhCCCCEEEECCccC
Confidence 75 469999999964
No 264
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.29 E-value=2.8e-06 Score=74.88 Aligned_cols=81 Identities=17% Similarity=0.184 Sum_probs=60.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~---~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|+||+|++|..++++|++++. ..+.+.+|+.++.+.. .+++.. ...++.++.+|+++++++++++..
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA------RHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC------CeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 589999999999999999998872 4688888876543322 122221 124567788999999998888764
Q ss_pred -------cCeeEeccCCC
Q 014694 89 -------TKLLLNCVGPY 99 (420)
Q Consensus 89 -------~dvVIn~aGp~ 99 (420)
.|.|||++|..
T Consensus 75 ~~~~~~~id~li~~ag~~ 92 (180)
T smart00822 75 IPARLGPLRGVIHAAGVL 92 (180)
T ss_pred HHHHcCCeeEEEEccccC
Confidence 59999999964
No 265
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.26 E-value=5.3e-06 Score=82.58 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=75.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHHHhC---C---CCCCCccEEEEeCC-----
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWAS---P---SHSLSIPILTADTT----- 77 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~~l~---~---~~~~~~~~i~~D~~----- 77 (420)
+|++||||||+|.+++++|+...+ .+|.+..|-.+ .++++.+.+. . ....++.++.+|+.
T Consensus 2 ~vlLTGATGFLG~yLl~eLL~~~~------~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG 75 (382)
T COG3320 2 NVLLTGATGFLGAYLLLELLDRSD------AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG 75 (382)
T ss_pred eEEEecCchHhHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence 689999999999999999998863 68998888433 2333333322 1 13467889999987
Q ss_pred -CHHHHHHHHhccCeeEeccCCCCC---C---------c-HHHHHHHHHcCCc-EEecC
Q 014694 78 -DPPSLHRLCSQTKLLLNCVGPYRL---H---------G-DPVAAACVHSGCD-YLDIS 121 (420)
Q Consensus 78 -d~~sl~~~~~~~dvVIn~aGp~~~---~---------~-~~vv~Ac~~~g~~-yvdis 121 (420)
+.....+++.++|.|||+++-.+. | | ..+++.|...+.+ +..+|
T Consensus 76 L~~~~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVS 134 (382)
T COG3320 76 LSERTWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVS 134 (382)
T ss_pred CCHHHHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEe
Confidence 567899999999999999985432 1 1 6788888876653 44444
No 266
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.24 E-value=7e-06 Score=74.49 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=70.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
...+|+||+..||+.|++.|++++ +++++++++.+..++....|+ ...+...+.||+.++.+++.+++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~G-------arv~v~dl~~~~A~ata~~L~--g~~~h~aF~~DVS~a~~v~~~l~e~~ 85 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKG-------ARVAVADLDSAAAEATAGDLG--GYGDHSAFSCDVSKAHDVQNTLEEME 85 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcC-------cEEEEeecchhhHHHHHhhcC--CCCccceeeeccCcHHHHHHHHHHHH
Confidence 358999999999999999999998 899999999998888888875 23466789999999998888665
Q ss_pred ----ccCeeEeccCCCCC
Q 014694 88 ----QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ----~~dvVIn~aGp~~~ 101 (420)
..++|+||||....
T Consensus 86 k~~g~psvlVncAGItrD 103 (256)
T KOG1200|consen 86 KSLGTPSVLVNCAGITRD 103 (256)
T ss_pred HhcCCCcEEEEcCccccc
Confidence 46899999998654
No 267
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.24 E-value=6.3e-06 Score=79.19 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=59.4
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||++ .||+.+++.|++++ ++|++.+|+. ++++.++++.. ......++.+|++|+++++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G-------~~v~~~~r~~-~~~~~~~~l~~-~~g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHG-------AELWFTYQSE-VLEKRVKPLAE-EIGCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcC-------CEEEEEeCch-HHHHHHHHHHH-hcCCceEEEccCCCHHHHHHHHHH
Confidence 3699999997 89999999999988 7899989884 33333333321 01122357899999999998875
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|++||++|..
T Consensus 80 ~~~~~g~iDilVnnag~~ 97 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFA 97 (260)
T ss_pred HHHHcCCccEEEEccccC
Confidence 379999999853
No 268
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.24 E-value=5.5e-06 Score=80.44 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=69.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHh
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+.++|||++..||+.+|+.|++.+ .+|++.+|+++++++..+++.. ....++..+.+|+.+.+..++++.
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~G-------a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~ 80 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAG-------AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVE 80 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHH
Confidence 3579999999999999999999998 8999999999999888776542 112457789999998887777654
Q ss_pred --------ccCeeEeccCCCCC
Q 014694 88 --------QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 --------~~dvVIn~aGp~~~ 101 (420)
+.|++||++|....
T Consensus 81 ~~~~~~~GkidiLvnnag~~~~ 102 (270)
T KOG0725|consen 81 FAVEKFFGKIDILVNNAGALGL 102 (270)
T ss_pred HHHHHhCCCCCEEEEcCCcCCC
Confidence 57999999997554
No 269
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.22 E-value=4.3e-06 Score=78.53 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=58.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+|+|+||+|+||+.++++|++++. ...+.+..|+.... . ...++.++++|++|.++++++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-----~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-----DATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-----CCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHhcC
Confidence 4799999999999999999999852 15666666654321 1 12467789999999998877654
Q ss_pred ccCeeEeccCCCC
Q 014694 88 QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (420)
+.|+|||++|...
T Consensus 67 ~id~li~~aG~~~ 79 (235)
T PRK09009 67 QLDWLINCVGMLH 79 (235)
T ss_pred CCCEEEECCcccc
Confidence 6899999999754
No 270
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.21 E-value=3.7e-06 Score=76.62 Aligned_cols=82 Identities=20% Similarity=0.255 Sum_probs=57.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|+|++|.+|..++++|++++. .++++.+|+. .+.++..+++.. ...++.++.+|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~------~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~ 74 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA------RRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQ 74 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCC------CEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHH
Confidence 479999999999999999999983 6899999992 233344444431 245788899999999999999875
Q ss_pred -------cCeeEeccCCCC
Q 014694 89 -------TKLLLNCVGPYR 100 (420)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (420)
.+.|||++|...
T Consensus 75 ~~~~~~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 75 LRQRFGPIDGVIHAAGVLA 93 (181)
T ss_dssp SHTTSS-EEEEEE------
T ss_pred HHhccCCcceeeeeeeeec
Confidence 367999999753
No 271
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.21 E-value=5.4e-06 Score=79.55 Aligned_cols=81 Identities=10% Similarity=0.103 Sum_probs=60.0
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|+||+ +.||+.+++.|++++ .+|++..|+.+ +.++.++++.. ...+..++.+|++|++++++++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~ 78 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAG-------AELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETF 78 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHH
Confidence 469999986 799999999999998 78888765432 23333333321 1124567889999999999887
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
+ ..|++|||+|..
T Consensus 79 ~~~~~~~g~iD~lv~nag~~ 98 (258)
T PRK07370 79 ETIKQKWGKLDILVHCLAFA 98 (258)
T ss_pred HHHHHHcCCCCEEEEccccc
Confidence 5 469999999964
No 272
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.20 E-value=5.8e-06 Score=90.20 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=62.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..|+|+|+||+||+|++++++|.+++ ++|.+. ..|++|.+.+.+.++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g-------~~v~~~-------------------------~~~l~d~~~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQG-------IAYEYG-------------------------KGRLEDRSSLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCC-------CeEEee-------------------------ccccccHHHHHHHHHh
Confidence 55789999999999999999998876 555211 124567777777776
Q ss_pred -ccCeeEeccCCCC---C-C---------------cHHHHHHHHHcCCcEEecCC
Q 014694 88 -QTKLLLNCVGPYR---L-H---------------GDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 88 -~~dvVIn~aGp~~---~-~---------------~~~vv~Ac~~~g~~yvdisg 122 (420)
+.|+|||||+... . . ..+++++|.+.|++.+.+|.
T Consensus 427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss 481 (668)
T PLN02260 427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFAT 481 (668)
T ss_pred hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcc
Confidence 6899999998642 1 0 17789999999998777743
No 273
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.19 E-value=7.7e-06 Score=78.61 Aligned_cols=77 Identities=13% Similarity=0.077 Sum_probs=59.9
Q ss_pred ceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagR---s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++|+|| ++.||+.+++.|++++ .+|++.+| +.++++++.++++ ....+.+|++|+++++++
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~ 74 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEFG-----SDLVFPCDVASDEQIDAL 74 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCC-------CeEEEEccchHHHHHHHHHHHhcC-----CcceeeccCCCHHHHHHH
Confidence 47999996 6799999999999988 78888765 3455555544432 234688999999999988
Q ss_pred Hh-------ccCeeEeccCCC
Q 014694 86 CS-------QTKLLLNCVGPY 99 (420)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (420)
++ ..|++||++|..
T Consensus 75 ~~~~~~~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 75 FASLGQHWDGLDGLVHSIGFA 95 (260)
T ss_pred HHHHHHHhCCCcEEEEccccC
Confidence 75 479999999964
No 274
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.17 E-value=1.1e-05 Score=83.87 Aligned_cols=77 Identities=13% Similarity=0.090 Sum_probs=62.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs--~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..++|+||+|++|+.++++|++++ .++++.+|+ .++++++.++++ ..++.+|++|+++++++++
T Consensus 211 ~~vlItGasggIG~~la~~l~~~G-------a~vi~~~~~~~~~~l~~~~~~~~------~~~~~~Dv~~~~~~~~~~~~ 277 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDG-------AHVVCLDVPAAGEALAAVANRVG------GTALALDITAPDAPARIAEH 277 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHcC------CeEEEEeCCCHHHHHHHHHH
Confidence 479999999999999999999987 789888884 345555555442 3578999999999888776
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|+|||++|...
T Consensus 278 ~~~~~g~id~vi~~AG~~~ 296 (450)
T PRK08261 278 LAERHGGLDIVVHNAGITR 296 (450)
T ss_pred HHHhCCCCCEEEECCCcCC
Confidence 4799999999653
No 275
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.17 E-value=1.7e-05 Score=77.77 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=63.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|| |.+|+.++..|++.+. -+|.+.+|+. ++++++.+++.. ....+.+..+|+.|.+++.+.++
T Consensus 127 k~vlI~GA-GGagrAia~~La~~G~------~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 127 KKLTVIGA-GGAATAIQVQCALDGA------KEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhhc
Confidence 47999999 7999999999999872 3599999997 778777776642 12234566789988888988899
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
.+|+||||...
T Consensus 199 ~~DilINaTp~ 209 (289)
T PRK12548 199 SSDILVNATLV 209 (289)
T ss_pred cCCEEEEeCCC
Confidence 99999998854
No 276
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=8e-06 Score=77.89 Aligned_cols=81 Identities=14% Similarity=0.039 Sum_probs=60.7
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
..|+|+|||| .+|..++++|++++ ++|++.+|+ ......+.+++.. ...++.++.+|++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 77 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKG-------IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLS 77 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcC-------CcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCC
Confidence 3699999995 79999999999987 789999987 2221123333321 1245788999999
Q ss_pred CHHHHHHHHhc-------cCeeEeccCCC
Q 014694 78 DPPSLHRLCSQ-------TKLLLNCVGPY 99 (420)
Q Consensus 78 d~~sl~~~~~~-------~dvVIn~aGp~ 99 (420)
|.+++.+++++ .|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 99998887653 69999999864
No 277
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.16 E-value=4.6e-06 Score=78.24 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=57.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~~~~~ 89 (420)
..++|+||+|++|+.++++|++++ ++|++.+|+.... . ..++.++.+|++|+ +.+.+.+...
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~i 68 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQG-------AQVYGVDKQDKPD------L----SGNFHFLQLDLSDDLEPLFDWVPSV 68 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCC-------CEEEEEeCCcccc------c----CCcEEEEECChHHHHHHHHHhhCCC
Confidence 479999999999999999999987 7899999985432 1 23567889999987 5555555678
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+|||++|..
T Consensus 69 d~lv~~ag~~ 78 (235)
T PRK06550 69 DILCNTAGIL 78 (235)
T ss_pred CEEEECCCCC
Confidence 9999999953
No 278
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=1.5e-05 Score=76.14 Aligned_cols=81 Identities=12% Similarity=0.064 Sum_probs=60.6
Q ss_pred ceEEEEcCCc--HHHHHHHHHHHHhCCCCCCCcceEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 014694 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 11 ~~IvV~GATG--~~G~~va~~L~~~~~~~~~~~~~v~iagRs-----------~~kl~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
..++|+||+| .+|+.++++|++++ .+|++++|+ .++++++.+++.. ...++.++.+|++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G-------~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~ 78 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAG-------ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLT 78 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCC
Confidence 4799999995 89999999999998 678877542 2333344444421 2345678899999
Q ss_pred CHHHHHHHHh-------ccCeeEeccCCC
Q 014694 78 DPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
|.+++.+++. ..|+|||++|..
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 9999988875 369999999964
No 279
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.04 E-value=4.7e-06 Score=79.59 Aligned_cols=66 Identities=18% Similarity=0.270 Sum_probs=48.9
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-ccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~dv 91 (420)
|+|+|||||||++++..|.+.+ ++|.+..|+..+.+.... ..+. .-+.+..... ++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g-------h~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG-------HQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC-------CeEEEEEcCCcchhhhcC-------cccc-------ccchhhhcccCCCCE
Confidence 6899999999999999999987 799999999887643221 1111 1233444444 7999
Q ss_pred eEeccCCC
Q 014694 92 LLNCVGPY 99 (420)
Q Consensus 92 VIn~aGp~ 99 (420)
|||.||-.
T Consensus 60 vINLAG~~ 67 (297)
T COG1090 60 VINLAGEP 67 (297)
T ss_pred EEECCCCc
Confidence 99999953
No 280
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=98.02 E-value=1.5e-05 Score=67.81 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=63.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~-~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+||||++|+.+++.|.++-+ +++ .+.+|+.+..+.+...... .... ....-+ .+.+.+ .++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~------~e~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~-~~~~~~----~~~ 67 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD------FELVALVSSSRSAGKPLSEVFPH--PKGFEDLSVED-ADPEEL----SDV 67 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST------EEEEEEEESTTTTTSBHHHTTGG--GTTTEEEBEEE-TSGHHH----TTE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC------ccEEEeeeeccccCCeeehhccc--cccccceeEee-cchhHh----hcC
Confidence 589999999999999999999642 554 4455555232222221110 0111 122222 333333 889
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+||.|.+.. ....++..+.+.|+..||+|++..
T Consensus 68 Dvvf~a~~~~--~~~~~~~~~~~~g~~ViD~s~~~R 101 (121)
T PF01118_consen 68 DVVFLALPHG--ASKELAPKLLKAGIKVIDLSGDFR 101 (121)
T ss_dssp SEEEE-SCHH--HHHHHHHHHHHTTSEEEESSSTTT
T ss_pred CEEEecCchh--HHHHHHHHHhhCCcEEEeCCHHHh
Confidence 9999998643 236788888999999999998763
No 281
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.97 E-value=2.4e-05 Score=71.77 Aligned_cols=63 Identities=30% Similarity=0.500 Sum_probs=53.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
|+++|+||+|++|+.++++|+++ .+|++.+|+.+ .+.+|++|+++++++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~--------~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~ 54 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR--------HEVITAGRSSG------------------DVQVDITDPASIRALFEKVG 54 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc--------CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcC
Confidence 36999999999999999999876 36788888642 25789999999999887
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
+.|+|||++|..
T Consensus 55 ~id~lv~~ag~~ 66 (199)
T PRK07578 55 KVDAVVSAAGKV 66 (199)
T ss_pred CCCEEEECCCCC
Confidence 579999999964
No 282
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=97.93 E-value=6.7e-05 Score=71.05 Aligned_cols=84 Identities=18% Similarity=0.175 Sum_probs=61.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCCCCC-CCccEEEEeCCC-HHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHS-LSIPILTADTTD-PPSLHR 84 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~~~~-~~~~~i~~D~~d-~~sl~~ 84 (420)
....|+|+||++.+|+.+++.|++++ .+++++.|+.+. ++.+.+... ... ..+.+..+|+++ .++++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~ 75 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREG-------ARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEA 75 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHH
Confidence 34579999999999999999999877 787877877553 333333221 011 245677799998 888887
Q ss_pred HHh-------ccCeeEeccCCCC
Q 014694 85 LCS-------QTKLLLNCVGPYR 100 (420)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (420)
+++ +.|++||+||...
T Consensus 76 ~~~~~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 76 LVAAAEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 765 3789999999754
No 283
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=97.90 E-value=8.9e-05 Score=68.97 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=76.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iag-Rs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.|+|+||+-.||.-++++|.+... .+++++. |++++..+.++... ....++.+++.|+++.++++++++
T Consensus 5 sv~ItGaNRGIGlgLVk~llk~~~------i~~iiat~r~~e~a~~~l~~k~-~~d~rvHii~Ldvt~deS~~~~~~~V~ 77 (249)
T KOG1611|consen 5 SVFITGANRGIGLGLVKELLKDKG------IEVIIATARDPEKAATELALKS-KSDSRVHIIQLDVTCDESIDNFVQEVE 77 (249)
T ss_pred cEEEeccCcchhHHHHHHHhcCCC------cEEEEEecCChHHhhHHHHHhh-ccCCceEEEEEecccHHHHHHHHHHHH
Confidence 499999999999999999997652 5555555 66888433333221 135789999999999999999876
Q ss_pred ------ccCeeEeccCCCCCCc------HHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+.+++||++|.+..|. ..++-.|.+.++ .|.....+.++.
T Consensus 78 ~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~-----v~~il~~Q~~lP 129 (249)
T KOG1611|consen 78 KIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNA-----VGPILLTQAFLP 129 (249)
T ss_pred hhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcc-----hhHHHHHHHHHH
Confidence 4689999999876653 444555554433 344444555554
No 284
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.88 E-value=9.7e-05 Score=68.11 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=69.9
Q ss_pred CcceEEEEc-CCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILG-ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~G-ATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+..|+|+| +.|.||..+++++.++| +.|....|+.+...++..+. ++...+.|+++++++.++..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G-------~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~ 72 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNG-------YLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSG 72 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCC-------eEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHH
Confidence 445677777 56999999999999998 89999999999887776544 47889999999999888754
Q ss_pred --------ccCeeEeccCC-----CCCCcHHHHHHHHHc
Q 014694 88 --------QTKLLLNCVGP-----YRLHGDPVAAACVHS 113 (420)
Q Consensus 88 --------~~dvVIn~aGp-----~~~~~~~vv~Ac~~~ 113 (420)
..|+++|+||. .......-++-|-+.
T Consensus 73 evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~v 111 (289)
T KOG1209|consen 73 EVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKV 111 (289)
T ss_pred HHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhcc
Confidence 35899999984 222334445555443
No 285
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.87 E-value=7.5e-05 Score=64.80 Aligned_cols=76 Identities=17% Similarity=0.225 Sum_probs=58.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+|| |.+|+.++.+|.+.+. -++.++.|+.++.+++.+.+. ...+-..++ +++.+.+.+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~------~~i~i~nRt~~ra~~l~~~~~-----~~~~~~~~~---~~~~~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGA------KEITIVNRTPERAEALAEEFG-----GVNIEAIPL---EDLEEALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTS------SEEEEEESSHHHHHHHHHHHT-----GCSEEEEEG---GGHCHHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCC------CEEEEEECCHHHHHHHHHHcC-----ccccceeeH---HHHHHHHhh
Confidence 3458999998 8899999999999983 469999999999999998873 223334444 345678889
Q ss_pred cCeeEeccCCC
Q 014694 89 TKLLLNCVGPY 99 (420)
Q Consensus 89 ~dvVIn~aGp~ 99 (420)
+|+||||.+.-
T Consensus 76 ~DivI~aT~~~ 86 (135)
T PF01488_consen 76 ADIVINATPSG 86 (135)
T ss_dssp ESEEEE-SSTT
T ss_pred CCeEEEecCCC
Confidence 99999998743
No 286
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.87 E-value=7.3e-05 Score=75.89 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=71.5
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRL 85 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~-~sl~~~ 85 (420)
+.++.+|+|.||||.+|+.+++.|.+++ +.+....|+.++.+.+..... .......+..|...+ +.+.++
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrg-------f~vra~VRd~~~a~~~~~~~~--~d~~~~~v~~~~~~~~d~~~~~ 146 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRG-------FSVRALVRDEQKAEDLLGVFF--VDLGLQNVEADVVTAIDILKKL 146 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCC-------CeeeeeccChhhhhhhhcccc--cccccceeeeccccccchhhhh
Confidence 4466789999999999999999999998 899999999988877655111 122344555554443 334444
Q ss_pred Hhcc----CeeEeccCCC--CC---C--------cHHHHHHHHHcCC-cEEec
Q 014694 86 CSQT----KLLLNCVGPY--RL---H--------GDPVAAACVHSGC-DYLDI 120 (420)
Q Consensus 86 ~~~~----dvVIn~aGp~--~~---~--------~~~vv~Ac~~~g~-~yvdi 120 (420)
+... .+++-|+|-. .. . -.++++||..+|+ |++.+
T Consensus 147 ~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv 199 (411)
T KOG1203|consen 147 VEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLV 199 (411)
T ss_pred hhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEE
Confidence 4432 3667776621 11 1 2889999999998 55555
No 287
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=97.84 E-value=7.3e-05 Score=70.53 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=78.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHh-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~-~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
-++|+|++..+|..+|.+|++..+.+ ..+.++++.|+.+|.+++...+.. + ...+++++.+|++|-.++.++.+
T Consensus 5 valITGanSglGl~i~~RLl~~~De~--~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDEN--VRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCc--eeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999986432 237889999999999988877754 1 12467889999999888877755
Q ss_pred ------ccCeeEeccCCCCCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHGDPVAAACVH 112 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~Ac~~ 112 (420)
..|.|+-+||.....+.+...|...
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~ 113 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFG 113 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHH
Confidence 5799999999877777666666543
No 288
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.84 E-value=5.7e-05 Score=70.29 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=65.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
...++++|+.|.||..+++.|++.+ ..+.++.-+.|+.+..++ |.. .....+-++++|+++..++++.++
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kg-------ik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~k 76 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKG-------IKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDK 76 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcC-------chheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHH
Confidence 3479999999999999999999998 677777777777655443 322 234567899999999999988876
Q ss_pred ------ccCeeEeccCCCC
Q 014694 88 ------QTKLLLNCVGPYR 100 (420)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (420)
..|++||.||...
T Consensus 77 i~~~fg~iDIlINgAGi~~ 95 (261)
T KOG4169|consen 77 ILATFGTIDILINGAGILD 95 (261)
T ss_pred HHHHhCceEEEEccccccc
Confidence 4799999999865
No 289
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.84 E-value=0.00011 Score=86.62 Aligned_cols=110 Identities=14% Similarity=0.200 Sum_probs=76.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH---HHHHHHHhC---C---CCCCCccEEEEeCC---
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWAS---P---SHSLSIPILTADTT--- 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k---l~~~~~~l~---~---~~~~~~~~i~~D~~--- 77 (420)
..+|+|+|||||+|.+++++|++++.. ...+|.+..|+..+ ++.+.+.+. . ....++.++.+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCcc
Confidence 468999999999999999999987511 02688888897533 222222110 0 01136788999986
Q ss_pred ---CHHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC-cEEecCC
Q 014694 78 ---DPPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDISG 122 (420)
Q Consensus 78 ---d~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~-~yvdisg 122 (420)
+.+.+.++..++|+|||++++.... ..+++++|.+.+. +++.+|.
T Consensus 1048 lgl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS 1109 (1389)
T TIGR03443 1048 FGLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSS 1109 (1389)
T ss_pred CCcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 4466778888999999999976532 1677888888776 4555554
No 290
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.82 E-value=4.2e-05 Score=72.33 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=59.3
Q ss_pred cCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-------
Q 014694 17 GAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------- 87 (420)
Q Consensus 17 GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------- 87 (420)
|++ +.||+.+++.|+++| .+|++.+|+.++++..++++.. ....+++.+|++|+++++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~G-------a~V~~~~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG-------ANVILTDRNEEKLADALEELAK--EYGAEVIQCDLSDEESVEALFDEAVERFG 71 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT-------EEEEEEESSHHHHHHHHHHHHH--HTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHH--HcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence 667 999999999999998 8999999999985444443321 1123479999999999999854
Q ss_pred -ccCeeEeccCCCCC
Q 014694 88 -QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 -~~dvVIn~aGp~~~ 101 (420)
..|++||++|....
T Consensus 72 g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 72 GRIDILVNNAGISPP 86 (241)
T ss_dssp SSESEEEEEEESCTG
T ss_pred CCeEEEEeccccccc
Confidence 46999999986543
No 291
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.80 E-value=8.7e-05 Score=74.10 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=63.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHh-CCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~-~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+||+|++|+.+|++|+++ +. .++.+.+|+.++++.+.+++. ..|+ .++.+.+.+
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~~rl~~La~el~----------~~~i---~~l~~~l~~ 215 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQERLQELQAELG----------GGKI---LSLEEALPE 215 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCHHHHHHHHHHhc----------cccH---HhHHHHHcc
Confidence 357999999999999999999865 32 588999999999888776552 1222 246788899
Q ss_pred cCeeEeccCCCCCC--cHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRLH--GDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~--~~~vv~Ac~~~g~~yvdis 121 (420)
+|+|||+++-.... ... -.+.+.-.||++
T Consensus 216 aDiVv~~ts~~~~~~I~~~----~l~~~~~viDiA 246 (340)
T PRK14982 216 ADIVVWVASMPKGVEIDPE----TLKKPCLMIDGG 246 (340)
T ss_pred CCEEEECCcCCcCCcCCHH----HhCCCeEEEEec
Confidence 99999999853321 111 113445677773
No 292
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.75 E-value=0.0001 Score=73.54 Aligned_cols=88 Identities=14% Similarity=0.047 Sum_probs=56.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--HHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIP-ILTADTTDPPSLHRL 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--kl~~~~~~l~~~~~~~~~-~i~~D~~d~~sl~~~ 85 (420)
++++|+|+||+|++|+.++..|+..+-.+.....++.+.+|++. +++....++. +.. ....|+....++.+.
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~-----d~~~~~~~~~~~~~~~~~~ 75 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ-----DCAFPLLKSVVATTDPEEA 75 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh-----hccccccCCceecCCHHHH
Confidence 36789999999999999999998854210000147999999653 3332211111 000 111244444667788
Q ss_pred HhccCeeEeccCCCCC
Q 014694 86 CSQTKLLLNCVGPYRL 101 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~ 101 (420)
++++|+|||+||....
T Consensus 76 l~~aDiVI~tAG~~~~ 91 (325)
T cd01336 76 FKDVDVAILVGAMPRK 91 (325)
T ss_pred hCCCCEEEEeCCcCCC
Confidence 8999999999997543
No 293
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.75 E-value=7.5e-05 Score=75.06 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=66.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEE-EEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL-TADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i-~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+||||++|+.+++.|.++. ..++..+.++.++.+.+.+... .+..+ ..++.+.+.. ...++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p------~~elv~v~~~~~~g~~l~~~~~-----~~~~~~~~~~~~~~~~--~~~~v 69 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHP------EVEIVAVTSRSSAGKPLSDVHP-----HLRGLVDLVLEPLDPE--ILAGA 69 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCC------CceEEEEECccccCcchHHhCc-----ccccccCceeecCCHH--HhcCC
Confidence 689999999999999999998763 1666554443333222222211 11111 1123333322 45789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+|+-|.... ...+++.+|.++|+|.||+|+...+-
T Consensus 70 D~Vf~alP~~--~~~~~v~~a~~aG~~VID~S~~fR~~ 105 (343)
T PRK00436 70 DVVFLALPHG--VSMDLAPQLLEAGVKVIDLSADFRLK 105 (343)
T ss_pred CEEEECCCcH--HHHHHHHHHHhCCCEEEECCcccCCC
Confidence 9999888653 34788889999999999999988663
No 294
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.74 E-value=4.5e-05 Score=77.59 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=67.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-H
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-C 86 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~ 86 (420)
.++++|.|+||||++|+.+++.|.++. ..++..+.++.++.+.+.+.. ..+...|+.+.++++.. +
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP------~~el~~l~s~~saG~~i~~~~-------~~l~~~~~~~~~~~~~~~~ 102 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHP------DFEITVMTADRKAGQSFGSVF-------PHLITQDLPNLVAVKDADF 102 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCC------CCeEEEEEChhhcCCCchhhC-------ccccCccccceecCCHHHh
Confidence 466799999999999999999999883 278888777654432222111 11111222222222222 4
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
+++|+||.+.+. .....++.+. +.|+..||+|+...+-
T Consensus 103 ~~~DvVf~Alp~--~~s~~i~~~~-~~g~~VIDlSs~fRl~ 140 (381)
T PLN02968 103 SDVDAVFCCLPH--GTTQEIIKAL-PKDLKIVDLSADFRLR 140 (381)
T ss_pred cCCCEEEEcCCH--HHHHHHHHHH-hCCCEEEEcCchhccC
Confidence 789999998864 2346777775 6789999999887553
No 295
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.73 E-value=0.00011 Score=72.48 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=59.2
Q ss_pred cceEEEEcC--CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC--------C-C---CCccEEEEe
Q 014694 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--------H-S---LSIPILTAD 75 (420)
Q Consensus 10 ~~~IvV~GA--TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~--------~-~---~~~~~i~~D 75 (420)
...++|||| +..||..+++.|++.| .+|++ +|+.++|+++..++... . . .....+.+|
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~G-------a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 80 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAG-------AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD 80 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence 346999999 7999999999999998 78888 89888888777655310 0 0 113567788
Q ss_pred C--CCH------------------HHHHHHHh-------ccCeeEeccCC
Q 014694 76 T--TDP------------------PSLHRLCS-------QTKLLLNCVGP 98 (420)
Q Consensus 76 ~--~d~------------------~sl~~~~~-------~~dvVIn~aGp 98 (420)
+ .++ ++++++++ +.|++|||||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 8 333 36666655 47999999974
No 296
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.71 E-value=0.00018 Score=63.20 Aligned_cols=100 Identities=20% Similarity=0.222 Sum_probs=70.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.+++.|.+.+. .++.+.+|+.++.+++.+++.. .. +..+..| ..++++++
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~------~~v~v~~r~~~~~~~~~~~~~~---~~---~~~~~~~---~~~~~~~~ 82 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGA------AKIVIVNRTLEKAKALAERFGE---LG---IAIAYLD---LEELLAEA 82 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh---cc---cceeecc---hhhccccC
Confidence 457999997 8999999999998741 6899999999998887776641 11 2233334 33447899
Q ss_pred CeeEeccCCCCC--CcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~--~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+||+|+.+... ....+...+.+.+...+|++..+.
T Consensus 83 Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~ 120 (155)
T cd01065 83 DLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPL 120 (155)
T ss_pred CEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCC
Confidence 999999987653 222233455677788888875544
No 297
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.68 E-value=8.3e-05 Score=74.81 Aligned_cols=104 Identities=17% Similarity=0.218 Sum_probs=64.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+||||++|+.+++.|.++. ..++. +++++.+..+.+.+.... .........+-.| .+++.+++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP------~~el~~l~~s~~sagk~~~~~~~~--l~~~~~~~~~~~~---~~~~~~~~ 69 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHP------EVEITYLVSSRESAGKPVSEVHPH--LRGLVDLNLEPID---EEEIAEDA 69 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCC------CceEEEEeccchhcCCChHHhCcc--ccccCCceeecCC---HHHhhcCC
Confidence 479999999999999999998763 16666 435433222122221110 0011011122113 23444689
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+||.|.+- .....++..+.++|++.||+|+....-
T Consensus 70 DvVf~alP~--~~s~~~~~~~~~~G~~VIDlS~~fR~~ 105 (346)
T TIGR01850 70 DVVFLALPH--GVSAELAPELLAAGVKVIDLSADFRLK 105 (346)
T ss_pred CEEEECCCc--hHHHHHHHHHHhCCCEEEeCChhhhcC
Confidence 999998853 234788888889999999999887654
No 298
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.68 E-value=0.00014 Score=70.83 Aligned_cols=82 Identities=16% Similarity=0.186 Sum_probs=69.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
-+|+|+|++..+|..++.++..++ ..|.+..|+.+|+.++...++. ....++.+..+|+.|-+++..++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g-------a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG-------ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc-------CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 379999999999999999999998 6899999999999999888764 11233668889999999999998754
Q ss_pred -------CeeEeccCCC
Q 014694 90 -------KLLLNCVGPY 99 (420)
Q Consensus 90 -------dvVIn~aGp~ 99 (420)
|.+|||||-.
T Consensus 107 ~~~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGVA 123 (331)
T ss_pred hhccCCcceEEEecCcc
Confidence 8999999954
No 299
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.63 E-value=0.00016 Score=72.37 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=67.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+||||++|+.+++.|.+++.+ ..++..+.|+.+..+.+. + ....+...|+.+. .++++|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~~g~~l~--~-----~g~~i~v~d~~~~-----~~~~vD 65 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARSAGKELS--F-----KGKELKVEDLTTF-----DFSGVD 65 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEccccCCCeee--e-----CCceeEEeeCCHH-----HHcCCC
Confidence 57999999999999999999986521 145666666544332221 1 1234455566432 236899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+||.|+|-. ....++....++|+..||+|+...+
T Consensus 66 vVf~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R~ 99 (334)
T PRK14874 66 IALFSAGGS--VSKKYAPKAAAAGAVVIDNSSAFRM 99 (334)
T ss_pred EEEECCChH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence 999998754 3467777778899999999987643
No 300
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=97.62 E-value=0.00023 Score=70.94 Aligned_cols=106 Identities=21% Similarity=0.323 Sum_probs=86.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH-HHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP-SLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~-sl~~~~~~~ 89 (420)
..|+++|+ ||+.+.++++|.++.+ .+|+++.|...+.+++.+. .+++.+..|+.|++ .|++.++..
T Consensus 3 ~~vlllgs-g~v~~p~~d~ls~~~d------v~vtva~~~~~~~~~~~~~------~~~~av~ldv~~~~~~L~~~v~~~ 69 (445)
T KOG0172|consen 3 KGVLLLGS-GFVSRPVADFLSRKKD------VNVTVASRTLKDAEALVKG------INIKAVSLDVADEELALRKEVKPL 69 (445)
T ss_pred cceEEecC-ccccchHHHHHhhcCC------ceEEEehhhHHHHHHHhcC------CCccceEEEccchHHHHHhhhccc
Confidence 36899985 9999999999999873 8999999999988887763 34788999999988 999999999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~ 131 (420)
|+||+.. ||.. ...+.++|+.+..|.+..|--.+=++++-
T Consensus 70 D~viSLl-P~t~-h~lVaK~~i~~~~~~vtsSyv~pe~~~L~ 109 (445)
T KOG0172|consen 70 DLVISLL-PYTF-HPLVAKGCIITKEDSVTSSYVDPELEELE 109 (445)
T ss_pred ceeeeec-cchh-hHHHHHHHHHhhcccccccccCHHHHhhh
Confidence 9999887 5543 25778999999998877765555555543
No 301
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.62 E-value=0.00013 Score=72.95 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=64.1
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
++.++|.|+||||++|+.+++.|.++..+ ..++..+... ++.-+.+. + .. ...++.+.+.. . ++
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~hP----~~~l~~v~s~-~~aG~~l~-~-----~~---~~l~~~~~~~~-~-~~ 65 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDFP----VGTLHLLASS-ESAGHSVP-F-----AG---KNLRVREVDSF-D-FS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCCC----ceEEEEEECc-ccCCCeec-c-----CC---cceEEeeCChH-H-hc
Confidence 34479999999999999999999975421 2444444322 22110000 1 11 12333332222 2 47
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|+-+++. .....++..+.++|+..||+|++..+
T Consensus 66 ~vD~vFla~p~--~~s~~~v~~~~~~G~~VIDlS~~fR~ 102 (336)
T PRK05671 66 QVQLAFFAAGA--AVSRSFAEKARAAGCSVIDLSGALPS 102 (336)
T ss_pred CCCEEEEcCCH--HHHHHHHHHHHHCCCeEEECchhhcC
Confidence 89999998864 33477888899999999999998753
No 302
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.61 E-value=0.00047 Score=71.19 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=72.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh---HHHHHHH--------HhCC---CCCCCccEEEEe
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQ--------WASP---SHSLSIPILTAD 75 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~---kl~~~~~--------~l~~---~~~~~~~~i~~D 75 (420)
...|+|||||||.|+-+++.|++..++- -++.+.-|... .-+++.+ .+.. ....++..+.+|
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v----~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDV----KRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCc----ceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 3479999999999999999999987531 46777777431 1112221 1211 123567778888
Q ss_pred CCC------HHHHHHHHhccCeeEeccCCCCCC-------------cHHHHHHHHHcCC--cEEecCCc
Q 014694 76 TTD------PPSLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC--DYLDISGE 123 (420)
Q Consensus 76 ~~d------~~sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~Ac~~~g~--~yvdisge 123 (420)
+.+ +.++..+.++.++|||+|+...+. ..++++.|++..- -++++|..
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTA 156 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTA 156 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehh
Confidence 874 356667889999999999975543 1666777766543 35665543
No 303
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.58 E-value=0.00021 Score=63.81 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=70.7
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
+.+...-+|+|+...+|+..++.|++.+ ..+++++--.+|-+++.++++ .++-+..+|++.+.++...+
T Consensus 6 s~kglvalvtggasglg~ataerlakqg-------asv~lldlp~skg~~vakelg----~~~vf~padvtsekdv~aal 74 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQG-------ASVALLDLPQSKGADVAKELG----GKVVFTPADVTSEKDVRAAL 74 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcC-------ceEEEEeCCcccchHHHHHhC----CceEEeccccCcHHHHHHHH
Confidence 3345567999999999999999999998 789999998899888999885 57888999999999988876
Q ss_pred h-------ccCeeEeccCCC
Q 014694 87 S-------QTKLLLNCVGPY 99 (420)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (420)
. +.|+.+||+|..
T Consensus 75 a~ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 75 AKAKAKFGRLDALVNCAGIA 94 (260)
T ss_pred HHHHhhccceeeeeecccee
Confidence 5 579999999964
No 304
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.55 E-value=0.00046 Score=65.24 Aligned_cols=98 Identities=22% Similarity=0.276 Sum_probs=73.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+++|.|+ |-+|..+|+.|.+.+ +.|+++++++++.++...+ ......+.+|.+|++.|+++ +.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g-------~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEG-------HNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGIDDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCC-------CceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCCcC
Confidence 57899987 889999999999998 7899999999998775441 12467899999999999999 8999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|++|-+.|-.........-|+.+.|++++-.-
T Consensus 68 D~vva~t~~d~~N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 68 DAVVAATGNDEVNSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred CEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 99998887432211222233444677655544
No 305
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.55 E-value=0.00098 Score=58.31 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=71.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+||+|.+|+.++..|...+- ..++.+.++++++++....++.. ............ .+ .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-----~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-----ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-----SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccc
Confidence 5899999999999999999998863 15799999998888776666532 001112222222 33 3446789
Q ss_pred CeeEeccCCCCCCc--------------HHHHHHHHHcCC--cEEecCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHG--------------DPVAAACVHSGC--DYLDISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~--------------~~vv~Ac~~~g~--~yvdisge~~~~~~~~~ 132 (420)
|+||.++|.....+ ..+.+...+.+- .++-+|.....+-.+..
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~~~ 129 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYVAQ 129 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHHHH
T ss_pred cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHHHH
Confidence 99999999755433 334444444443 36666666665554443
No 306
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.52 E-value=0.00051 Score=68.34 Aligned_cols=96 Identities=22% Similarity=0.207 Sum_probs=66.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+||+|.+|+.++..|+..+. ..++.+.+++ +++....++.. ....+...+.+|+.++.+.++++|
T Consensus 9 ~KI~IiGaaG~VGs~~a~~l~~~~~-----~~elvL~Di~--~~~g~a~Dl~~---~~~~~~v~~~td~~~~~~~l~gaD 78 (321)
T PTZ00325 9 FKVAVLGAAGGIGQPLSLLLKQNPH-----VSELSLYDIV--GAPGVAADLSH---IDTPAKVTGYADGELWEKALRGAD 78 (321)
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCC-----CCEEEEEecC--CCcccccchhh---cCcCceEEEecCCCchHHHhCCCC
Confidence 4899999999999999999886542 1578999983 32222222221 111344567777666788999999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~~ 116 (420)
+||+++|.-...+ .+++++..+++.+
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~ 118 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPK 118 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999754422 5566777777774
No 307
>PLN00106 malate dehydrogenase
Probab=97.52 E-value=0.00038 Score=69.32 Aligned_cols=84 Identities=18% Similarity=0.079 Sum_probs=57.9
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.++.+|+|+||+|.+|..++..|+.++- ..++.+.++++ .+....++. +....+...++.+.+++.+.++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~-----~~el~L~Di~~--~~g~a~Dl~---~~~~~~~i~~~~~~~d~~~~l~ 85 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPL-----VSELHLYDIAN--TPGVAADVS---HINTPAQVRGFLGDDQLGDALK 85 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCC-----CCEEEEEecCC--CCeeEchhh---hCCcCceEEEEeCCCCHHHHcC
Confidence 3456899999999999999999987652 14789999877 222122222 1112233445545566889999
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
++|+||+++|.-..
T Consensus 86 ~aDiVVitAG~~~~ 99 (323)
T PLN00106 86 GADLVIIPAGVPRK 99 (323)
T ss_pred CCCEEEEeCCCCCC
Confidence 99999999996443
No 308
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.43 E-value=0.00059 Score=66.81 Aligned_cols=74 Identities=20% Similarity=0.185 Sum_probs=53.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.++..|++.+- -++.+.+|+.+|.+.+.+.+.. ...... .... +++.+.++++
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~------~~I~I~nR~~~ka~~la~~l~~-~~~~~~--~~~~---~~~~~~~~~a 193 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGV------ERLTIFDVDPARAAALADELNA-RFPAAR--ATAG---SDLAAALAAA 193 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHHHh-hCCCeE--EEec---cchHhhhCCC
Confidence 357999997 7799999999998872 4799999999999988887641 011111 1222 2345567889
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+||||.
T Consensus 194 DiVInaT 200 (284)
T PRK12549 194 DGLVHAT 200 (284)
T ss_pred CEEEECC
Confidence 9999994
No 309
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0005 Score=68.03 Aligned_cols=106 Identities=19% Similarity=0.246 Sum_probs=68.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.++|.|.||+||+|..+++.|+.|.. +++.++..++.+-+.+.+... ......-.....-|++.+ ...+|
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~------ve~~~~ss~~~~g~~~~~~~p--~l~g~~~l~~~~~~~~~~--~~~~~ 71 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPD------VELILISSRERAGKPVSDVHP--NLRGLVDLPFQTIDPEKI--ELDEC 71 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCC------eEEEEeechhhcCCchHHhCc--ccccccccccccCChhhh--hcccC
Confidence 46899999999999999999999863 676666554433222322221 001110022222233333 45679
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~ 127 (420)
|+||.|.- +.....++....+.|++.||+|++..+-
T Consensus 72 DvvFlalP--hg~s~~~v~~l~~~g~~VIDLSadfR~~ 107 (349)
T COG0002 72 DVVFLALP--HGVSAELVPELLEAGCKVIDLSADFRLK 107 (349)
T ss_pred CEEEEecC--chhHHHHHHHHHhCCCeEEECCcccccC
Confidence 99998873 2334778888888999999999988775
No 310
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.38 E-value=0.00081 Score=58.13 Aligned_cols=104 Identities=15% Similarity=0.287 Sum_probs=70.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
|+.+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~Gv------~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSGV------GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHTT------SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCC------CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 3568999997 7799999999999983 478887743 1233334333321 01223
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+..+..++ +.+.+.++++++|+||.|...... ...+-+.|.+.+..+|+..
T Consensus 74 v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~~~~-~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 74 VEAIPEKI-DEENIEELLKDYDIVIDCVDSLAA-RLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp EEEEESHC-SHHHHHHHHHTSSEEEEESSSHHH-HHHHHHHHHHTT-EEEEEE
T ss_pred eeeeeccc-ccccccccccCCCEEEEecCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 44444455 567788999999999999876432 3567789999999988865
No 311
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.36 E-value=0.0013 Score=66.62 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=58.3
Q ss_pred CCcceEEEEcCCcHHHHH--HHHHHHHhCCCCCCCcceEEEEecChhH---------------HHHHHHHhCCCCCCCcc
Q 014694 8 PELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIP 70 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~--va~~L~~~~~~~~~~~~~v~iagRs~~k---------------l~~~~~~l~~~~~~~~~ 70 (420)
.....+||+|+++.+|.. +++.| +.| .++++.++..++ .++.+++. ...+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~G-------A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~----G~~a~ 106 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAG-------ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA----GLYAK 106 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcC-------CeEEEEecCcchhhhcccccccchHHHHHHHHHhc----CCceE
Confidence 344589999999999999 89999 877 677777753321 22222222 23456
Q ss_pred EEEEeCCCHHHHHHHHh-------ccCeeEeccCCC
Q 014694 71 ILTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (420)
.+.+|++++++++++++ +.|+|||++|..
T Consensus 107 ~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 107 SINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 78999999999888876 479999999954
No 312
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.35 E-value=0.0016 Score=66.37 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=73.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |=+|..++++|++++. .++.++.|+.++.+++.++++ +++...+.+...+..+
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~------~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~~~ 239 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGV------KKITIANRTLERAEELAKKLG-----------AEAVALEELLEALAEA 239 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCC------CEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhhhC
Confidence 447999998 8899999999999983 689999999999999998773 3444567788999999
Q ss_pred CeeEeccCCC-CCCcHHHHHHHHHcCCc--EEecC
Q 014694 90 KLLLNCVGPY-RLHGDPVAAACVHSGCD--YLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~-~~~~~~vv~Ac~~~g~~--yvdis 121 (420)
|+||++.|-. .......++.+.+..-+ +||++
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence 9999887743 33455666666665544 67773
No 313
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.35 E-value=0.00061 Score=83.54 Aligned_cols=84 Identities=20% Similarity=0.133 Sum_probs=61.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--------------h-----------------------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--------------T----------------------- 52 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--------------~----------------------- 52 (420)
...+||+||++.||..++++|++++. .++++.+|+. .
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~g------a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQ------AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcC------CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 34799999999999999999999852 7899999982 0
Q ss_pred ----------HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh------ccCeeEeccCCCC
Q 014694 53 ----------RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------QTKLLLNCVGPYR 100 (420)
Q Consensus 53 ----------kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~------~~dvVIn~aGp~~ 100 (420)
.+++.++.+.. .+.++.++.+|++|.+++.++++ +.|+|||+||...
T Consensus 2071 ~~~~~~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred hcccccchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 11111222211 13456788999999999998876 3699999999653
No 314
>PRK05086 malate dehydrogenase; Provisional
Probab=97.30 E-value=0.002 Score=63.93 Aligned_cols=97 Identities=15% Similarity=0.091 Sum_probs=59.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|+|+||||.+|+.++..|...... ...+.+.+|++.. +...-++. .......+.+ .+.+++.+.++++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~----~~el~L~d~~~~~-~g~alDl~--~~~~~~~i~~--~~~~d~~~~l~~~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPA----GSELSLYDIAPVT-PGVAVDLS--HIPTAVKIKG--FSGEDPTPALEGAD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCC----ccEEEEEecCCCC-cceehhhh--cCCCCceEEE--eCCCCHHHHcCCCC
Confidence 58999999999999999988653311 1578888887532 11111221 1111223333 22345667778999
Q ss_pred eeEeccCCCCCCc--------------HHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHG--------------DPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~--------------~~vv~Ac~~~g~~ 116 (420)
+||.|+|.-+..+ ..++++..+.+.+
T Consensus 72 iVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~ 111 (312)
T PRK05086 72 VVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPK 111 (312)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999755432 4455666666653
No 315
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.30 E-value=0.0013 Score=64.16 Aligned_cols=106 Identities=17% Similarity=0.171 Sum_probs=68.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|...+. .+|.+.+|+.++.+++.+++.. ...+. .+. ++.+.+.++
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~------~~V~v~~R~~~~a~~l~~~~~~--~~~~~---~~~----~~~~~~~~~ 186 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGV------AEITIVNRTVERAEELAKLFGA--LGKAE---LDL----ELQEELADF 186 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh--cccee---ecc----cchhccccC
Confidence 347999997 9999999999998872 5899999999999888877641 11111 111 234566789
Q ss_pred CeeEeccCCCCCC---cHHHHHHHHHcCCcEEecCC---cHHHHHHHH
Q 014694 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISG---EPEFMERME 131 (420)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~Ac~~~g~~yvdisg---e~~~~~~~~ 131 (420)
|+||||...-... ..++...+...+...+|+.- +.+|++...
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T~ll~~A~ 234 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPTPFLAWAK 234 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCCHHHHHHH
Confidence 9999998533211 11333345555566667653 445555443
No 316
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.29 E-value=0.0012 Score=66.26 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=63.5
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia--gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.++++|.|+||||++|+.+++.|.+++.+. .++..+ .|+..+.... .......-++ +++ .
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~----~~l~~las~rsaGk~~~~---------~~~~~~v~~~-~~~----~ 66 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPY----SSLKMLASARSAGKKVTF---------EGRDYTVEEL-TED----S 66 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCc----ceEEEEEccCCCCCeeee---------cCceeEEEeC-CHH----H
Confidence 456899999999999999999998854211 344322 2333332111 1122333333 222 2
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++++|+||.|++-- ....++..+.+.|+..||+|+...+
T Consensus 67 ~~~~D~vf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR~ 105 (344)
T PLN02383 67 FDGVDIALFSAGGS--ISKKFGPIAVDKGAVVVDNSSAFRM 105 (344)
T ss_pred HcCCCEEEECCCcH--HHHHHHHHHHhCCCEEEECCchhhc
Confidence 46899999888642 3467777777899999999988744
No 317
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.29 E-value=0.00074 Score=64.00 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=49.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHHhccC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLCSQTK 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d--~~sl~~~~~~~d 90 (420)
.+=-.+|||+|++++++|+++| ++|.++.|+.... .. ...++.++.++..+ .+.+.+.++++|
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G-------~~V~li~r~~~~~-----~~---~~~~v~~i~v~s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAG-------HEVTLVTTKTAVK-----PE---PHPNLSIIEIENVDDLLETLEPLVKDHD 83 (229)
T ss_pred eecCccchHHHHHHHHHHHhCC-------CEEEEEECccccc-----CC---CCCCeEEEEEecHHHHHHHHHHHhcCCC
Confidence 3333578999999999999998 7898888764211 00 11245556554332 245666777899
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+|||+||...
T Consensus 84 ivIh~AAvsd 93 (229)
T PRK06732 84 VLIHSMAVSD 93 (229)
T ss_pred EEEeCCccCC
Confidence 9999999753
No 318
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.28 E-value=0.0016 Score=60.57 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=70.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
++.+|+|+|+ |.+|..+++.|++.|- -++.+++++ ..|.+.+.+.+.. ..+.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv------~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v 91 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGV------GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRE-LNSDI 91 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHH-hCCCC
Confidence 3457999986 7799999999999983 478888876 2344444444432 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
++ +..++ +.+.+.+.++++|+||.|...+. ....+-+.|.+.++.+|+..
T Consensus 92 ~i~~~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~-~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 92 QVTALKERV-TAENLELLINNVDLVLDCTDNFA-TRYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEEehhcC-CHHHHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33 33333 44678888999999999986542 22456788999998888764
No 319
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.27 E-value=0.00069 Score=67.98 Aligned_cols=97 Identities=14% Similarity=0.134 Sum_probs=65.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+||||++|+.+++.|.+++-+ ..++..+.++.+..+.+. + ...+....|++ . ..++++|+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp----~~~l~~~as~~~~g~~~~--~-----~~~~~~~~~~~-~----~~~~~~D~ 64 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFP----IDKLVLLASDRSAGRKVT--F-----KGKELEVNEAK-I----ESFEGIDI 64 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCC----hhhEEEEeccccCCCeee--e-----CCeeEEEEeCC-h----HHhcCCCE
Confidence 4889999999999999999886421 245555555543322211 1 12345566663 1 23478999
Q ss_pred eEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
||-|+|.. ....++....+.|+..||+|+...+
T Consensus 65 v~~a~g~~--~s~~~a~~~~~~G~~VID~ss~~R~ 97 (339)
T TIGR01296 65 ALFSAGGS--VSKEFAPKAAKCGAIVIDNTSAFRM 97 (339)
T ss_pred EEECCCHH--HHHHHHHHHHHCCCEEEECCHHHhC
Confidence 99999864 3467777778889999999987643
No 320
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.26 E-value=0.0031 Score=61.71 Aligned_cols=77 Identities=16% Similarity=0.175 Sum_probs=54.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |..++.++-.|++.+. .++.+..|+.++.+++.+.+.. ......+. ..+..++.+....+
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~ka~~La~~~~~--~~~~~~~~--~~~~~~~~~~~~~~ 195 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINN--AVGREAVV--GVDARGIEDVIAAA 195 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh--ccCcceEE--ecCHhHHHHHHhhc
Confidence 347999998 8899999999998872 4799999999999988877631 11111111 12233344455779
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|+|||+.-
T Consensus 196 divINaTp 203 (283)
T PRK14027 196 DGVVNATP 203 (283)
T ss_pred CEEEEcCC
Confidence 99999974
No 321
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.25 E-value=0.0032 Score=61.52 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=82.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh---
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--- 87 (420)
.-|+|||.-...|+.+|++|.+.| ++|.++.-+++..+.+..+.. .++...+..|++++++++++.+
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~G-------f~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~ 99 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKG-------FRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVK 99 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcC-------CEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHH
Confidence 359999999999999999999998 899888888887777766552 4677888999999999999886
Q ss_pred ------ccCeeEeccCCCCCCc------HHHHHHHHHcCCcEEecCCcHHHHHHHHH
Q 014694 88 ------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEA 132 (420)
Q Consensus 88 ------~~dvVIn~aGp~~~~~------~~vv~Ac~~~g~~yvdisge~~~~~~~~~ 132 (420)
+--.|||+||.....| ..-.+.|.+ |++=|.....+.++.
T Consensus 100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~-----vNllG~irvT~~~lp 151 (322)
T KOG1610|consen 100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLN-----VNLLGTIRVTKAFLP 151 (322)
T ss_pred HhcccccceeEEeccccccccCccccccHHHHHHHHh-----hhhhhHHHHHHHHHH
Confidence 2457999999654433 444555554 345577777777766
No 322
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.25 E-value=0.0028 Score=64.41 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=70.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++.+|+|+|+ |-+|+.+++.+.+.+ .+|.+.+|+.++++.+...++ ..+..+..+.+.+.+.+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lG-------a~V~v~d~~~~~~~~l~~~~g-------~~v~~~~~~~~~l~~~l~~ 230 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLG-------ATVTILDINIDRLRQLDAEFG-------GRIHTRYSNAYEIEDAVKR 230 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHhcC-------ceeEeccCCHHHHHHHHcc
Confidence 3457999987 899999999999887 689999999998877665543 1233456678889999999
Q ss_pred cCeeEeccCCCC-----CCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYR-----LHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~-----~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||+|++... ......++. .+.+...+|++
T Consensus 231 aDvVI~a~~~~g~~~p~lit~~~l~~-mk~g~vIvDva 267 (370)
T TIGR00518 231 ADLLIGAVLIPGAKAPKLVSNSLVAQ-MKPGAVIVDVA 267 (370)
T ss_pred CCEEEEccccCCCCCCcCcCHHHHhc-CCCCCEEEEEe
Confidence 999999984311 112444433 24455677776
No 323
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.24 E-value=0.0012 Score=66.41 Aligned_cols=105 Identities=13% Similarity=0.135 Sum_probs=65.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh-CCC----CCCCccEEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA-SPS----HSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l-~~~----~~~~~~~i~~D~~d~~sl~~ 84 (420)
+++|.|+||||++|+.+++.|.++.. .++..+.++.++..+....+ ... ......-+.+...+++.+
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 74 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAV-- 74 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHh--
Confidence 47899999999999999999987642 67777656554332211111 000 000011122222344432
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
.++|+|+-+.+.. ....+++++.+.|+..||+|++...
T Consensus 75 --~~~DvVf~a~p~~--~s~~~~~~~~~~G~~vIDls~~fR~ 112 (349)
T PRK08664 75 --DDVDIVFSALPSD--VAGEVEEEFAKAGKPVFSNASAHRM 112 (349)
T ss_pred --cCCCEEEEeCChh--HHHHHHHHHHHCCCEEEECCchhcC
Confidence 5899998876542 3467778888999999999987533
No 324
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.21 E-value=0.002 Score=64.58 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=71.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~-~~~~ 67 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ...-
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v 96 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV------GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDV 96 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCc
Confidence 357999998 8899999999999983 4788888762 233333333321 0112
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
++..+..+++ ++.+.++++++|+||.|..-+. ....+-++|.+.++.+|..+
T Consensus 97 ~v~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~-~r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 97 RVEAIVQDVT-AEELEELVTGVDLIIDATDNFE-TRFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred EEEEEeccCC-HHHHHHHHcCCCEEEEcCCCHH-HHHHHHHHHHHhCCCEEEEe
Confidence 3344445654 5678888999999999987543 23457789999999887754
No 325
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.21 E-value=0.0043 Score=60.83 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=54.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+++|+|| |..++.++-.|+..+. .++.+..|+. +|.+++.+.+.. .....+...+..+.+.+.+.+.
T Consensus 125 k~vlvlGa-GGaarAi~~~l~~~g~------~~i~i~nRt~~~~~ka~~la~~~~~--~~~~~~~~~~~~~~~~l~~~~~ 195 (288)
T PRK12749 125 KTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEALA 195 (288)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCccHHHHHHHHHHHhhh--ccCceEEEechhhhhhhhhhcc
Confidence 47999997 7789999999988772 5899999994 588788776641 1111122233333334555677
Q ss_pred ccCeeEeccCC
Q 014694 88 QTKLLLNCVGP 98 (420)
Q Consensus 88 ~~dvVIn~aGp 98 (420)
++|+||||.-.
T Consensus 196 ~aDivINaTp~ 206 (288)
T PRK12749 196 SADILTNGTKV 206 (288)
T ss_pred cCCEEEECCCC
Confidence 89999998743
No 326
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.19 E-value=0.0011 Score=59.43 Aligned_cols=80 Identities=20% Similarity=0.131 Sum_probs=67.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
..|+++||.-.||+.+++.|++.| .+|+...|+++.|..+.++- ..-+.-+++|+.+.+.+.+.+..
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aG-------A~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAG-------AQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcC-------CEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccC
Confidence 468999999999999999999998 79999999999999888754 23467788999998888888764
Q ss_pred -cCeeEeccCCCCC
Q 014694 89 -TKLLLNCVGPYRL 101 (420)
Q Consensus 89 -~dvVIn~aGp~~~ 101 (420)
.|.++|+||....
T Consensus 77 pidgLVNNAgvA~~ 90 (245)
T KOG1207|consen 77 PIDGLVNNAGVATN 90 (245)
T ss_pred chhhhhccchhhhc
Confidence 5899999996543
No 327
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.19 E-value=0.0022 Score=64.40 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=71.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~-~~~~ 67 (420)
..+|+|+|+ |.+|..++++|++.|- -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv------g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v 96 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI------GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV 96 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence 457999997 6799999999999983 4788888863 244444444432 0122
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++..+..|++ .+.++++++++|+||.|...+.. ...+-++|.+.++.+|..
T Consensus 97 ~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~-r~~in~~~~~~~ip~i~~ 147 (338)
T PRK12475 97 EIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT-RLLINDLSQKYNIPWIYG 147 (338)
T ss_pred EEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 3444555664 46788899999999999976532 244668999999987765
No 328
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.19 E-value=0.0028 Score=61.47 Aligned_cols=98 Identities=19% Similarity=0.182 Sum_probs=63.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++.+++.+++.. ... ....+..+ ....++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g-------~~v~v~~R~~~~~~~la~~~~~--~~~--~~~~~~~~-----~~~~~~ 179 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKAD-------CNVIIANRTVSKAEELAERFQR--YGE--IQAFSMDE-----LPLHRV 179 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhh--cCc--eEEechhh-----hcccCc
Confidence 347999998 799999999999876 6899999999999888877641 111 12222211 123579
Q ss_pred CeeEeccCCCCCC---cHHHHHHHHHcCCcEEecCCcH
Q 014694 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~Ac~~~g~~yvdisge~ 124 (420)
|+||||.+..... ..++.......+...+|++-.+
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 9999999753211 1122233445566678876443
No 329
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.18 E-value=0.0027 Score=62.04 Aligned_cols=77 Identities=17% Similarity=0.180 Sum_probs=55.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |.+|+.++..|++.+. -++.++.|+.++.+++.+++.. ...+.. +...+++...+.++
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~------~~i~I~nRt~~ka~~La~~~~~----~~~~~~--~~~~~~~~~~~~~~ 191 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGV------TDITVINRNPDKLSRLVDLGVQ----VGVITR--LEGDSGGLAIEKAA 191 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhhh----cCccee--ccchhhhhhcccCC
Confidence 457999987 8899999999999872 4799999999999998887641 111111 22223445566789
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||...-
T Consensus 192 DiVInaTp~g 201 (282)
T TIGR01809 192 EVLVSTVPAD 201 (282)
T ss_pred CEEEECCCCC
Confidence 9999998643
No 330
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.18 E-value=0.0022 Score=66.58 Aligned_cols=91 Identities=13% Similarity=0.229 Sum_probs=70.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
|+|+|+|+ |.+|+.+++.|.+.+ .++.+.+|++++++.+.+.. ++.++.+|.++++.++++ +.++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g-------~~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~a 66 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN-------NDVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAGAEDA 66 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CcEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcCCCcC
Confidence 57999998 999999999999877 78999999999887665422 467889999999999998 8899
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHc-CCc
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHS-GCD 116 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~-g~~ 116 (420)
|.||.+..-.. ....+...|.+. +..
T Consensus 67 ~~vi~~~~~~~-~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 67 DLLIAVTDSDE-TNMVACQIAKSLFGAP 93 (453)
T ss_pred CEEEEecCChH-HHHHHHHHHHHhcCCC
Confidence 99998875322 223344556654 553
No 331
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.18 E-value=0.0024 Score=66.30 Aligned_cols=92 Identities=17% Similarity=0.240 Sum_probs=67.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+++ +|..+++.|++.| ++|.+.+++. +.+++..+++. ..++.++..|..+ +...+
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~-----~~~~~ 68 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLG-------AKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPE-----EFLEG 68 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcch-----hHhhc
Confidence 45799999877 9999999999998 8999999975 44544445442 1245677777655 34567
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+|+||+++|.. ...+++.+|.+.|+..+.
T Consensus 69 ~d~vv~~~g~~--~~~~~~~~a~~~~i~~~~ 97 (450)
T PRK14106 69 VDLVVVSPGVP--LDSPPVVQAHKKGIEVIG 97 (450)
T ss_pred CCEEEECCCCC--CCCHHHHHHHHCCCcEEe
Confidence 99999999864 346788888887775543
No 332
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.17 E-value=0.0033 Score=62.31 Aligned_cols=93 Identities=13% Similarity=0.172 Sum_probs=66.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+|+|+|+ |-+|+.++++|...+. .+|.+.+|+.++.+++.++++ .. +.+.+++.+.+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~------~~V~v~~r~~~ra~~la~~~g------~~-----~~~~~~~~~~l~~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGV------AEITIANRTYERAEELAKELG------GN-----AVPLDELLELLNE 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHcC------Ce-----EEeHHHHHHHHhc
Confidence 3568999997 9999999999988652 579999999999888888764 11 1233567788889
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHc----CCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHS----GCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~----g~~yvdis 121 (420)
+|+||.|.+.... ..+++...+. +.-.+|++
T Consensus 239 aDvVi~at~~~~~--~~~~~~~~~~~~~~~~~viDla 273 (311)
T cd05213 239 ADVVISATGAPHY--AKIVERAMKKRSGKPRLIVDLA 273 (311)
T ss_pred CCEEEECCCCCch--HHHHHHHHhhCCCCCeEEEEeC
Confidence 9999999986543 3333333222 23467774
No 333
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.17 E-value=0.0014 Score=58.97 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=71.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
.+..+|+||||-+|+-+++++++... + .+|.++.|.+-- +.. ....+.....|.+.-+.+...+.+.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~--F---SKV~~i~RR~~~-----d~a---t~k~v~q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQ--F---SKVYAILRRELP-----DPA---TDKVVAQVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhccc--c---eeEEEEEeccCC-----Ccc---ccceeeeEEechHHHHHHHhhhcCC
Confidence 35799999999999999999998762 2 578888886311 000 1234566777887777777788899
Q ss_pred CeeEeccCCCCC-------------CcHHHHHHHHHcCC-cEEecC
Q 014694 90 KLLLNCVGPYRL-------------HGDPVAAACVHSGC-DYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~-------------~~~~vv~Ac~~~g~-~yvdis 121 (420)
||.+.|.|...- |-....+++++.|+ |++-+|
T Consensus 85 dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvS 130 (238)
T KOG4039|consen 85 DVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVS 130 (238)
T ss_pred ceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEe
Confidence 999999986542 22667788889998 455554
No 334
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.16 E-value=0.0037 Score=62.34 Aligned_cols=88 Identities=14% Similarity=-0.002 Sum_probs=53.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+|.|+||+|.+|+.++..|+..+-........+.+.++++ ++++....++.......... ..+. ....+.+++
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~--~~i~--~~~~~~~~~ 76 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKG--VVIT--TDPEEAFKD 76 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCC--cEEe--cChHHHhCC
Confidence 37999999999999999998876521100113689999987 55433332222100000000 0111 235688899
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||++||.-...
T Consensus 77 aDiVVitAG~~~~~ 90 (323)
T cd00704 77 VDVAILVGAFPRKP 90 (323)
T ss_pred CCEEEEeCCCCCCc
Confidence 99999999965443
No 335
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.11 E-value=0.0033 Score=61.37 Aligned_cols=109 Identities=24% Similarity=0.249 Sum_probs=68.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|| |..++.++..|++.+. .++.|+.|+.++.+++.+.+.. ....+...+..+.+.+. ++
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~------~~i~V~NRt~~ra~~La~~~~~---~~~~~~~~~~~~~~~~~----~~ 191 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGA------KRITVVNRTRERAEELADLFGE---LGAAVEAAALADLEGLE----EA 191 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh---ccccccccccccccccc----cc
Confidence 357999998 7799999999999983 5899999999999999887752 11111122332322222 78
Q ss_pred CeeEeccCCCCCC--cH-HHHHHHHHcCCcEEe---cCCcHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLH--GD-PVAAACVHSGCDYLD---ISGEPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~--~~-~vv~Ac~~~g~~yvd---isge~~~~~~~~~ 132 (420)
|+|||+...-..- +. ++-..+.....-..| .-.+.+|++...+
T Consensus 192 dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~ 240 (283)
T COG0169 192 DLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARA 240 (283)
T ss_pred CEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHH
Confidence 9999998643222 12 222334444433333 3356677766554
No 336
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=97.10 E-value=0.0014 Score=63.14 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=61.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|++|.+|+.+++.+.+... +++ .+.+++.++.... . ..++...++++++++.+
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~~~~~~~----~----------~~~i~~~~dl~~ll~~~ 61 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPGSPLVGQ----G----------ALGVAITDDLEAVLADA 61 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCcccccc----C----------CCCccccCCHHHhccCC
Confidence 6899999999999999988876531 454 4567776554221 1 11222234566677789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
|+||.++-|... ..++++|.++|+|.+.
T Consensus 62 DvVid~t~p~~~--~~~~~~al~~G~~vvi 89 (257)
T PRK00048 62 DVLIDFTTPEAT--LENLEFALEHGKPLVI 89 (257)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEE
Confidence 999999976543 7889999999999764
No 337
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.10 E-value=0.0079 Score=48.39 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=62.1
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
+|.|+| +|.+|..+++.|++.+. ...++.+. .|++++++++.++.+ +.+... +..++++++|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~----~~~~v~~~~~r~~~~~~~~~~~~~------~~~~~~------~~~~~~~~ad 63 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI----KPHEVIIVSSRSPEKAAELAKEYG------VQATAD------DNEEAAQEAD 63 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSHHHHHHHHHHCT------TEEESE------EHHHHHHHTS
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC----CceeEEeeccCcHHHHHHHHHhhc------cccccC------ChHHhhccCC
Confidence 477885 69999999999999872 12688855 999999999888763 222221 2456677899
Q ss_pred eeEeccCCCCCCcHHHHHHH--HHcCCcEEecC
Q 014694 91 LLLNCVGPYRLHGDPVAAAC--VHSGCDYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac--~~~g~~yvdis 121 (420)
+||.|+-|... ..+++.. ...+..+|+++
T Consensus 64 vvilav~p~~~--~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 64 VVILAVKPQQL--PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp EEEE-S-GGGH--HHHHHHHHHHHTTSEEEEES
T ss_pred EEEEEECHHHH--HHHHHHHhhccCCCEEEEeC
Confidence 99999988654 3444443 44556677764
No 338
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.06 E-value=0.0042 Score=58.20 Aligned_cols=106 Identities=13% Similarity=0.105 Sum_probs=71.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------------------hHHHHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------------------~kl~~~~~~l~~-~~~~~~ 69 (420)
+..+|+|.|+ |.+|..+++.|++.|- -++.+.+.+. .|.+.+.+.+.. ....++
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV------GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 3457999997 7799999999999883 4677777651 344444444421 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHc-CCcEEecCCc
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISGE 123 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~~yvdisge 123 (420)
..+...++ .+.+.+.++++|+||.|...+.. -..+.+.|.+. ++.+|..++.
T Consensus 100 ~~~~~~i~-~~~~~~~~~~~DvVI~a~D~~~~-r~~l~~~~~~~~~~p~I~~~~~ 152 (212)
T PRK08644 100 EAHNEKID-EDNIEELFKDCDIVVEAFDNAET-KAMLVETVLEHPGKKLVAASGM 152 (212)
T ss_pred EEEeeecC-HHHHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHhCCCCEEEeehh
Confidence 33444454 35677889999999999754332 24577889998 9988887654
No 339
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.04 E-value=0.0058 Score=53.20 Aligned_cols=102 Identities=13% Similarity=0.211 Sum_probs=68.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc--
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP-- 70 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~-- 70 (420)
+|+|.|+ |.+|..+++.|++.+- -++.+.+.+ ..|.+.+.+.+.. ..+.++
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv------~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~-~~p~v~i~ 72 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV------GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNE-LNPGVNVT 72 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC------CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHH-HCCCcEEE
Confidence 4889997 8899999999999883 367777643 1233334443321 112333
Q ss_pred EEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 71 ~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+..++.+ +...+.+++.|+||.|...+. .-..+.+.|.+.++.+++....
T Consensus 73 ~~~~~~~~-~~~~~~~~~~diVi~~~d~~~-~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 73 AVPEGISE-DNLDDFLDGVDLVIDAIDNIA-VRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred EEeeecCh-hhHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 34444433 344778889999999998743 2366789999999999987543
No 340
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.99 E-value=0.0032 Score=63.26 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=62.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCC----CCCCCccEEEEeCCCHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASP----SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~----~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
++|.|+||||++|+.+++.|.++.. .++..+ .++.+..+.+.+.... .....+.-+.+.-.+++ .
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~------~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 70 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY------FELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPV----A 70 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------ceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHH----H
Confidence 4799999999999999998887652 566555 3332221111111100 00000111111111222 2
Q ss_pred HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
..++|+|+.+++.. ....+++++.+.|++.||+||+..+
T Consensus 71 ~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~fR~ 109 (341)
T TIGR00978 71 SKDVDIVFSALPSE--VAEEVEPKLAEAGKPVFSNASNHRM 109 (341)
T ss_pred hccCCEEEEeCCHH--HHHHHHHHHHHCCCEEEECChhhcc
Confidence 36899999888643 3356778888999999999998654
No 341
>PRK08223 hypothetical protein; Validated
Probab=96.97 E-value=0.0045 Score=60.41 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=67.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+.-+|+|.|+ |.+|..++++|++.|- -++.+++.+ ..|.+.+.+.+.. ..+.+
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGV------G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~-iNP~v 97 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGI------GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRD-INPEL 97 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCC------CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHH-HCCCC
Confidence 3457999998 7799999999999983 466666643 1233333333321 12334
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCC-CCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYR-LHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~-~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...++ ++.+.++++++|+||++.-.+. ..-..+-++|.+.++.+|..
T Consensus 98 ~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 98 EIRAFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 43 333443 4567888999999998886542 12245678999998877764
No 342
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.95 E-value=0.0045 Score=63.01 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=72.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..+++.|++.|- -++.+++++ ..|.+.+.+.+.. ..+.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gv------g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v 205 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGV------GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAA-LNPDV 205 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHH-HCCCC
Confidence 3457999987 7799999999999983 478888886 3566555555532 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+ +...+ +.+.+.++++++|+||+|...+.. ...+-++|.+.++.+|...
T Consensus 206 ~v~~~~~~~-~~~~~~~~~~~~D~Vv~~~d~~~~-r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 206 QVEAVQERV-TSDNVEALLQDVDVVVDGADNFPT-RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEEEeccC-ChHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33 32233 346778889999999999876431 2356789999999888763
No 343
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.93 E-value=0.0061 Score=57.64 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=68.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
..+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i 93 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV------GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI 93 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence 357999996 7799999999999883 356665432 2344444444432 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+.+..++ +.+.+.++++++|+||.|..... ....+-+.|.+.++.+|+..
T Consensus 94 ~~~~~~i-~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 94 EAYNERL-DAENAEELIAGYDLVLDCTDNFA-TRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEeccee-CHHHHHHHHhCCCEEEEcCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 3344444 45678888999999999987543 22557788999999888863
No 344
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.93 E-value=0.0021 Score=63.58 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=60.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+++|-|.|||||+|+.+++.|.++.. +++....++..+ |+.+ .+..++++
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~------~~l~~~~s~~~~---------------------~~~~---~~~~~~~~ 51 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD------IELLSIPEAKRK---------------------DAAA---RRELLNAA 51 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC------eEEEEEecCCCC---------------------cccC---chhhhcCC
Confidence 47899999999999999999988852 666655544322 0111 12345679
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
|+||.|... .....++..+.+.|+..||+|++..+
T Consensus 52 DvvFlalp~--~~s~~~~~~~~~~g~~VIDlSadfRl 86 (313)
T PRK11863 52 DVAILCLPD--DAAREAVALIDNPATRVIDASTAHRT 86 (313)
T ss_pred CEEEECCCH--HHHHHHHHHHHhCCCEEEECChhhhc
Confidence 999988742 23466777778899999999988754
No 345
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=96.91 E-value=0.0025 Score=62.84 Aligned_cols=84 Identities=14% Similarity=0.095 Sum_probs=59.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|.|||||+|..+++.|.++.. +++..+.-+.. + + +.+.+++++++|
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~------~el~~l~s~~~--------~-------------~---~~~~~~~~~~~D 51 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD------IELLSIAPDRR--------K-------------D---AAERAKLLNAAD 51 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC------eEEEEEecccc--------c-------------C---cCCHhHhhcCCC
Confidence 6899999999999999999999852 56544432211 1 0 112345667899
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+||.|+.. .....++....+.|+..||+|++..+
T Consensus 52 ~vFlalp~--~~s~~~~~~~~~~g~~VIDlSadfRl 85 (310)
T TIGR01851 52 VAILCLPD--DAAREAVSLVDNPNTCIIDASTAYRT 85 (310)
T ss_pred EEEECCCH--HHHHHHHHHHHhCCCEEEECChHHhC
Confidence 99988743 23466777777889999999987654
No 346
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.90 E-value=0.0072 Score=54.80 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=66.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh------------------hHHHHHHHHhCC-CCCCCccEE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSIPIL 72 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~------------------~kl~~~~~~l~~-~~~~~~~~i 72 (420)
+|+|+|+ |.+|..+++.|++.+- -++.+.+.+. .|.+.+.+.+.. ....++..+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~ 73 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV------GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAI 73 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4889997 7899999999999883 3688888764 233333333321 011233334
Q ss_pred EEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHc-CCcEEecCCc
Q 014694 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISGE 123 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~-g~~yvdisge 123 (420)
...+ +.+.+.+.++++|+||.|...... -..+.+.|.+. ++.+|.-++.
T Consensus 74 ~~~~-~~~~~~~~l~~~DlVi~~~d~~~~-r~~i~~~~~~~~~ip~i~~~~~ 123 (174)
T cd01487 74 NIKI-DENNLEGLFGDCDIVVEAFDNAET-KAMLAESLLGNKNKPVVCASGM 123 (174)
T ss_pred Eeec-ChhhHHHHhcCCCEEEECCCCHHH-HHHHHHHHHHHCCCCEEEEehh
Confidence 4444 346678889999999999654322 14467777777 8888876544
No 347
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.90 E-value=0.0038 Score=63.98 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=57.2
Q ss_pred CcceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 014694 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (420)
Q Consensus 9 ~~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i 72 (420)
...+|+|+|| +|.+|..++++|+++| .+|.+.+++.+ ++ . . ..+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-------a~V~~v~~~~~-~~-----~----~--~~~~ 247 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-------ADVTLVSGPVN-LP-----T----P--AGVK 247 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-------CEEEEeCCCcc-cc-----C----C--CCcE
Confidence 3457999999 8999999999999998 79999988752 21 1 1 1245
Q ss_pred EEeCCCHHHHHHHHh----ccCeeEeccCCCC
Q 014694 73 TADTTDPPSLHRLCS----QTKLLLNCVGPYR 100 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~----~~dvVIn~aGp~~ 100 (420)
.+|+++.+++.+.+. +.|++||+||...
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 689999888887764 5899999999754
No 348
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.89 E-value=0.0025 Score=54.72 Aligned_cols=105 Identities=16% Similarity=0.268 Sum_probs=56.9
Q ss_pred CCCCCCCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEE-EEecChhHHHHHHHHhCC-------CCCCCccEE
Q 014694 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASP-------SHSLSIPIL 72 (420)
Q Consensus 1 m~~~~~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~-iagRs~~kl~~~~~~l~~-------~~~~~~~~i 72 (420)
|..|.....+++|-|+|+ |-+|.++++.|.+.+ +.|. +..|+.++.+++...+.. ....+.+++
T Consensus 1 ~~~~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag-------~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv 72 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGA-GRVGTALARALARAG-------HEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLV 72 (127)
T ss_dssp -----------EEEEECT-SCCCCHHHHHHHHTT-------SEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEE
T ss_pred CCccccCCCccEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEEeCCcccccccccccccccccccccccccCCEE
Confidence 666655666789999998 999999999999987 5664 456887666665554432 012345666
Q ss_pred EEeCCCHHHHHHHHh---c------cCeeEeccCCCCCCcHHHHHHHHHcCCcE
Q 014694 73 TADTTDPPSLHRLCS---Q------TKLLLNCVGPYRLHGDPVAAACVHSGCDY 117 (420)
Q Consensus 73 ~~D~~d~~sl~~~~~---~------~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y 117 (420)
..-+.| +.+..+++ . -.+|+||.|-. +..+++...+.|+..
T Consensus 73 ~iavpD-daI~~va~~La~~~~~~~g~iVvHtSGa~---~~~vL~p~~~~Ga~~ 122 (127)
T PF10727_consen 73 FIAVPD-DAIAEVAEQLAQYGAWRPGQIVVHTSGAL---GSDVLAPARERGAIV 122 (127)
T ss_dssp EE-S-C-CHHHHHHHHHHCC--S-TT-EEEES-SS-----GGGGHHHHHTT-EE
T ss_pred EEEech-HHHHHHHHHHHHhccCCCCcEEEECCCCC---hHHhhhhHHHCCCeE
Confidence 666655 34554443 2 35899999853 456777777777743
No 349
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.89 E-value=0.0027 Score=56.80 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=58.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|-++|- |-.|+.++++|++.+ ++|.+.+|++++.+++.+.- ...+ ++..++++++|
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~g---------~~~~-----~s~~e~~~~~d 59 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAG-------YEVTVYDRSPEKAEALAEAG---------AEVA-----DSPAEAAEQAD 59 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTT-------TEEEEEESSHHHHHHHHHTT---------EEEE-----SSHHHHHHHBS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcC-------CeEEeeccchhhhhhhHHhh---------hhhh-----hhhhhHhhccc
Confidence 47888885 999999999999988 89999999999998877531 2233 34667777888
Q ss_pred eeEeccCCCCCCcHHHHHH-----HHHcCCcEEecCCcHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-----CVHSGCDYLDISGEPEFM 127 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-----c~~~g~~yvdisge~~~~ 127 (420)
+||.|+..... -+.++.. ....|.-+||.|...+-.
T Consensus 60 vvi~~v~~~~~-v~~v~~~~~i~~~l~~g~iiid~sT~~p~~ 100 (163)
T PF03446_consen 60 VVILCVPDDDA-VEAVLFGENILAGLRPGKIIIDMSTISPET 100 (163)
T ss_dssp EEEE-SSSHHH-HHHHHHCTTHGGGS-TTEEEEE-SS--HHH
T ss_pred ceEeecccchh-hhhhhhhhHHhhccccceEEEecCCcchhh
Confidence 88888743211 1122211 113455688877554443
No 350
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=96.88 E-value=0.008 Score=58.20 Aligned_cols=101 Identities=15% Similarity=0.251 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|. |.+|+.+++.|.+... + .+ +.+.+|+.++.+.+.+..+ .. . ..| +++++.++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~~~~a~~~a~~~~------~~--~--~~~---~~ell~~~ 62 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRNLEKAENLASKTG------AK--A--CLS---IDELVEDV 62 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCCHHHHHHHHHhcC------Ce--e--ECC---HHHHhcCC
Confidence 58999995 9999999999887531 1 44 5678899888877665432 11 1 123 45555789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC----cHHHHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG----EPEFMERMEA 132 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg----e~~~~~~~~~ 132 (420)
|+|+.|+.+... ..++..+.++|.|.+.++- +.++.+++.+
T Consensus 63 DvVvi~a~~~~~--~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~ 107 (265)
T PRK13304 63 DLVVECASVNAV--EEVVPKSLENGKDVIIMSVGALADKELFLKLYK 107 (265)
T ss_pred CEEEEcCChHHH--HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHH
Confidence 999999976443 5777888899999888764 5666666665
No 351
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.88 E-value=0.0078 Score=50.13 Aligned_cols=102 Identities=19% Similarity=0.252 Sum_probs=70.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HhccCe
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTKL 91 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~dv 91 (420)
|+|+|. |-+|+.+++.|.+.+ .++.+.++++++.+.+.++ .+.++.+|.+|++.++++ +.+++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~-------~~vvvid~d~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG-------IDVVVIDRDPERVEELREE-------GVEVIYGDATDPEVLERAGIEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT-------SEEEEEESSHHHHHHHHHT-------TSEEEES-TTSHHHHHHTTGGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCC-------CEEEEEECCcHHHHHHHhc-------ccccccccchhhhHHhhcCccccCE
Confidence 678887 789999999999954 6899999999998776652 368999999999999987 678998
Q ss_pred eEeccCCCCCCcHHHHHHHHH-cC-CcEEecCCcHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAAACVH-SG-CDYLDISGEPEFMERM 130 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~Ac~~-~g-~~yvdisge~~~~~~~ 130 (420)
||-+..-- .....+...+.+ ++ .+.+-...+....+.+
T Consensus 66 vv~~~~~d-~~n~~~~~~~r~~~~~~~ii~~~~~~~~~~~l 105 (116)
T PF02254_consen 66 VVILTDDD-EENLLIALLARELNPDIRIIARVNDPENAELL 105 (116)
T ss_dssp EEEESSSH-HHHHHHHHHHHHHTTTSEEEEEESSHHHHHHH
T ss_pred EEEccCCH-HHHHHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 88776521 112333444444 23 3444444555554444
No 352
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.85 E-value=0.0042 Score=62.30 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=63.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce---EEEEec--ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS---LALAGR--NPTRVKQALQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~---v~iagR--s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
.+.++|-|+||||++|+.+++.|.++.. +. +.++.. +..+. + .+. .. ....-++ |+++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~------f~v~~l~~~aS~~saGk~--~--~~~---~~--~l~v~~~-~~~~- 65 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETK------FNIAEVTLLSSKRSAGKT--V--QFK---GR--EIIIQEA-KINS- 65 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCC------CCcccEEEEECcccCCCC--e--eeC---Cc--ceEEEeC-CHHH-
Confidence 4568999999999999999999987642 33 433332 22222 1 111 11 2222233 4433
Q ss_pred HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++++|+|+.+++.- ....++..+.++|+..||.|+...+
T Consensus 66 ---~~~~Divf~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 66 ---FEGVDIAFFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred ---hcCCCEEEECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence 36799999988642 4577778888899999999988755
No 353
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.85 E-value=0.002 Score=64.53 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=62.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+.++|-|+||||++|+.+++.|.++.-+ ..++..+..+.+.-+.+. +. ..++.+. +++ . ..+.
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP----~~~l~~laS~~saG~~~~--~~---~~~~~v~--~~~---~--~~~~ 65 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFP----VGELYALASEESAGETLR--FG---GKSVTVQ--DAA---E--FDWS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCC----ceEEEEEEccCcCCceEE--EC---CcceEEE--eCc---h--hhcc
Confidence 47789999999999999999999885311 255544443222111110 11 1111111 321 1 1236
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
++|+|+.+++.- ....++....+.|+..||+|++...
T Consensus 66 ~~Dvvf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fRl 102 (336)
T PRK08040 66 QAQLAFFVAGRE--ASAAYAEEATNAGCLVIDSSGLFAL 102 (336)
T ss_pred CCCEEEECCCHH--HHHHHHHHHHHCCCEEEECChHhcC
Confidence 799999988542 3467777778899999999987643
No 354
>PRK09620 hypothetical protein; Provisional
Probab=96.80 E-value=0.0016 Score=61.79 Aligned_cols=80 Identities=8% Similarity=0.032 Sum_probs=51.5
Q ss_pred cceEEEEcCC----------------cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGAS----------------GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GAT----------------G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
..+|+|++|. ||+|.++|++|+++| ++|.+.++...... ..+. .......+.
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-------a~V~li~g~~~~~~---~~~~--~~~~~~~V~ 70 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-------AHVIYLHGYFAEKP---NDIN--NQLELHPFE 70 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-------CeEEEEeCCCcCCC---cccC--CceeEEEEe
Confidence 3578999775 999999999999998 78887775322110 0000 011122344
Q ss_pred EeCCCHHHHHHHHh--ccCeeEeccCCCCC
Q 014694 74 ADTTDPPSLHRLCS--QTKLLLNCVGPYRL 101 (420)
Q Consensus 74 ~D~~d~~sl~~~~~--~~dvVIn~aGp~~~ 101 (420)
.|.+..+.+.+++. ++|+|||+|+....
T Consensus 71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 71 GIIDLQDKMKSIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred cHHHHHHHHHHHhcccCCCEEEECccccce
Confidence 43344467778774 68999999998443
No 355
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.79 E-value=0.0055 Score=60.09 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=62.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|+ |.+|+.+++.|...+ .+|.+..|+.++++... +.+ .. .. +.+++.+.++++
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G-------~~V~v~~R~~~~~~~~~-~~g------~~--~~---~~~~l~~~l~~a 210 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALG-------ARVFVGARSSADLARIT-EMG------LI--PF---PLNKLEEKVAEI 210 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HCC------Ce--ee---cHHHHHHHhccC
Confidence 357999997 889999999999887 78999999988765543 221 11 11 245678888999
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
|+|||++. .......+++.. +.++-.+|++.
T Consensus 211 DiVint~P-~~ii~~~~l~~~-k~~aliIDlas 241 (287)
T TIGR02853 211 DIVINTIP-ALVLTADVLSKL-PKHAVIIDLAS 241 (287)
T ss_pred CEEEECCC-hHHhCHHHHhcC-CCCeEEEEeCc
Confidence 99999984 322233444333 34556888764
No 356
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.79 E-value=0.0048 Score=63.55 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=57.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |.+|+.++++|...+. .++.++.|+.++.+.+.++++ ... +...+++.+.+.++
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~------~~I~V~nRt~~ra~~La~~~~-----~~~-----~~~~~~l~~~l~~a 243 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAP------KQIMLANRTIEKAQKITSAFR-----NAS-----AHYLSELPQLIKKA 243 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHhc-----CCe-----EecHHHHHHHhccC
Confidence 347999997 8899999999999873 479999999999988887663 111 22335678889999
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||||.+.
T Consensus 244 DiVI~aT~a 252 (414)
T PRK13940 244 DIIIAAVNV 252 (414)
T ss_pred CEEEECcCC
Confidence 999999985
No 357
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.78 E-value=0.011 Score=57.24 Aligned_cols=106 Identities=10% Similarity=0.159 Sum_probs=69.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. -.+.+
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GV------g~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~-INP~~ 100 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGI------GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQ-INPEC 100 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHh-HCCCc
Confidence 3457999987 7799999999999883 356666643 1233334443321 12233
Q ss_pred cEEEE-eCCCHHHHHHHHh-ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 70 PILTA-DTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 70 ~~i~~-D~~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
.+... +.-+++.+.+++. ++|+||.|.+.... -..+.+.|.++++.+|.+.|.
T Consensus 101 ~V~~i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~-k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 101 RVTVVDDFITPDNVAEYMSAGFSYVIDAIDSVRP-KAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred EEEEEecccChhhHHHHhcCCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEECCc
Confidence 33333 2334566777774 79999999986432 356889999999999887543
No 358
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.76 E-value=0.011 Score=56.51 Aligned_cols=102 Identities=19% Similarity=0.199 Sum_probs=68.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ..+.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~-lnp~v 102 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGV------GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALAR-INPHI 102 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHH-HCCCC
Confidence 3458999998 8899999999999883 4677766431 244333343321 11233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...+ +++.+.++++++|+||.|...+.. -..+-++|.++++.+|+.
T Consensus 103 ~i~~~~~~i-~~~~~~~~~~~~DiVi~~~D~~~~-r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 103 AIETINARL-DDDELAALIAGHDLVLDCTDNVAT-RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEecCCCHHH-HHHHHHHHHHhCCEEEEe
Confidence 33 33334 456678889999999999875432 245678899999888774
No 359
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=96.76 E-value=0.027 Score=56.00 Aligned_cols=82 Identities=15% Similarity=0.139 Sum_probs=57.6
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
.+..+|.|+|| |.+|..++..|+..+- .-++.+.++++++++....++.. +...++. +.. .+ .+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~-----~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i~~--~~----~~~ 70 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGI-----ADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-IYA--GD----YSD 70 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCCchhHHHHHHHHhhccccCCeE-EEe--CC----HHH
Confidence 35569999998 9999999999887762 13799999999988877776642 1111222 222 23 234
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||.++|.....
T Consensus 71 ~~~adivIitag~~~k~ 87 (315)
T PRK00066 71 CKDADLVVITAGAPQKP 87 (315)
T ss_pred hCCCCEEEEecCCCCCC
Confidence 78999999999975443
No 360
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.75 E-value=0.0058 Score=52.17 Aligned_cols=106 Identities=19% Similarity=0.210 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhH-HH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTR-VK-QALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~k-l~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|+|+|++|-+|+.+++.+.++.. +++ .+.+|+.+. .. .+.+-++. ....+. -.+++++++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~~~~g~d~g~~~~~-~~~~~~-------v~~~l~~~~~ 66 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPSAKVGKDVGELAGI-GPLGVP-------VTDDLEELLE 66 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTSTTTTSBCHHHCTS-ST-SSB-------EBS-HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCcccccchhhhhhCc-CCcccc-------cchhHHHhcc
Confidence 5899999999999999999998541 564 555666521 11 11111110 011111 1256788888
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe-cCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd-isge~~~~~~~~~ 132 (420)
.+|+||.+.-|.. ....++.|.++|++.|- .||-...-.+.++
T Consensus 67 ~~DVvIDfT~p~~--~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~ 110 (124)
T PF01113_consen 67 EADVVIDFTNPDA--VYDNLEYALKHGVPLVIGTTGFSDEQIDELE 110 (124)
T ss_dssp H-SEEEEES-HHH--HHHHHHHHHHHT-EEEEE-SSSHHHHHHHHH
T ss_pred cCCEEEEcCChHH--hHHHHHHHHhCCCCEEEECCCCCHHHHHHHH
Confidence 8999999886532 36788999999998666 6677665545444
No 361
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=96.73 E-value=0.0023 Score=61.54 Aligned_cols=105 Identities=14% Similarity=0.227 Sum_probs=75.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR---s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
..++|+|+.||||++.+.++....++ .++...+. ... + ..+++.. ..++.+++..|+.|...+..++.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~-----~~~v~idkL~~~s~-~-~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~ 77 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD-----YKFVNLDKLDYCSN-L-KNLEPVR--NSPNYKFVEGDIADADLVLYLFE 77 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC-----CcEEEEeecccccc-c-chhhhhc--cCCCceEeeccccchHHHHhhhc
Confidence 57999999999999999999988753 45544432 111 2 2222222 35678999999999998888876
Q ss_pred --ccCeeEeccCCCCCC----------------cHHHHHHHHHcCC--cEEecCCcH
Q 014694 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGEP 124 (420)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~Ac~~~g~--~yvdisge~ 124 (420)
..|.|||.|+.++.. ...++++|...|- .+|++|.+-
T Consensus 78 ~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 78 TEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred cCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 578999999876532 1677888888853 578887543
No 362
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.72 E-value=0.013 Score=56.02 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=67.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|.|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ..+.++
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~-inp~v~ 95 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV------GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQ-INPHIA 95 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHH-HCCCcE
Confidence 457999987 7799999999999883 4666666531 233333333321 113344
Q ss_pred EEEEe-CCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 71 ILTAD-TTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 71 ~i~~D-~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+...+ --+.+.+.++++++|+||.|...+.. -..+-++|.+.++.+|..+
T Consensus 96 i~~~~~~i~~~~~~~~~~~~DlVvd~~D~~~~-r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 96 INPINAKLDDAELAALIAEHDIVVDCTDNVEV-RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEEeccCCHHHHHHHhhcCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33332 22446678889999999999876432 2456689999999888743
No 363
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=96.68 E-value=0.014 Score=58.28 Aligned_cols=90 Identities=13% Similarity=-0.013 Sum_probs=56.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+||+|.+|+.++..|+..+-.......++.+.++++ ++++....++.........-+. +. ....+.+
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~--i~--~~~~~~~ 77 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV--AT--TDPEEAF 77 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE--Ee--cChHHHh
Confidence 5789999999999999999999876521100113789999965 4565555555320000001011 11 1235678
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||.+||.....
T Consensus 78 ~daDvVVitAG~~~k~ 93 (323)
T TIGR01759 78 KDVDAALLVGAFPRKP 93 (323)
T ss_pred CCCCEEEEeCCCCCCC
Confidence 8999999999975433
No 364
>PRK08328 hypothetical protein; Provisional
Probab=96.68 E-value=0.014 Score=55.33 Aligned_cols=102 Identities=11% Similarity=0.104 Sum_probs=65.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChh--------------------HHHHHHHHhCCCCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--------------------RVKQALQWASPSHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~--------------------kl~~~~~~l~~~~~~~~ 69 (420)
..+|+|+|+ |.+|..+++.|++.|- -++.+++.+.- |.+...+.+.. ..+++
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~-~np~v 98 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGV------GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLER-FNSDI 98 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHH-hCCCC
Confidence 457999997 7799999999999983 46777774421 21111112211 01233
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+ +...+ +++.+.++++++|+||.|...+. ....+-++|.+.++.+|+..
T Consensus 99 ~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 99 KIETFVGRL-SEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEEeccC-CHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEe
Confidence 33 33334 45667888999999999987532 22445678999998887643
No 365
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.65 E-value=0.013 Score=59.11 Aligned_cols=102 Identities=10% Similarity=0.002 Sum_probs=69.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|+..|- -++.+++.+. .|.+.+.+.+.. ..+.+
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~-~np~v 98 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGV------GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLA-LNPDV 98 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHH-HCCCc
Confidence 3458999998 7799999999999883 4677777542 345445554432 12233
Q ss_pred --cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 --PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 --~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+.+...++ .+.+.++++++|+||.|..-+.. -.-+-++|.+.++.+|..
T Consensus 99 ~v~~~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~-r~~~n~~c~~~~ip~v~~ 149 (355)
T PRK05597 99 KVTVSVRRLT-WSNALDELRDADVILDGSDNFDT-RHLASWAAARLGIPHVWA 149 (355)
T ss_pred EEEEEEeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 33444553 46677889999999999875432 134668999999987764
No 366
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=96.65 E-value=0.015 Score=58.10 Aligned_cols=86 Identities=13% Similarity=0.068 Sum_probs=49.6
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+||+|.+|..++..|+..+-......+.+.+.++++.+ ++....++.. ...... ..+.-.....+.++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d---~~~~~~-~~~~~~~~~~~~~~~a 76 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMD---CAFPLL-DGVVPTHDPAVAFTDV 76 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhc---ccchhc-CceeccCChHHHhCCC
Confidence 589999999999999999987542100001368999986543 3322222211 000000 0000001345778899
Q ss_pred CeeEeccCCCCC
Q 014694 90 KLLLNCVGPYRL 101 (420)
Q Consensus 90 dvVIn~aGp~~~ 101 (420)
|+||+++|.-..
T Consensus 77 DiVVitAG~~~~ 88 (324)
T TIGR01758 77 DVAILVGAFPRK 88 (324)
T ss_pred CEEEEcCCCCCC
Confidence 999999996543
No 367
>PRK07877 hypothetical protein; Provisional
Probab=96.64 E-value=0.0087 Score=65.59 Aligned_cols=107 Identities=9% Similarity=0.054 Sum_probs=71.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
++.+|+|+|+ | +|..++.+|++.|-. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvv-----G~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v 178 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLC-----GELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPV 178 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCC-----CeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEE
Confidence 3457999999 7 999999999998710 256666643 1233333333321 112234
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
..+...+ +++.++++++++|+||.|.--+. .-.-+-++|.+.++.+|.-++..
T Consensus 179 ~~~~~~i-~~~n~~~~l~~~DlVvD~~D~~~-~R~~ln~~a~~~~iP~i~~~~~~ 231 (722)
T PRK07877 179 EVFTDGL-TEDNVDAFLDGLDVVVEECDSLD-VKVLLREAARARRIPVLMATSDR 231 (722)
T ss_pred EEEeccC-CHHHHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCCC
Confidence 4444445 47889999999999999997542 12456689999999988877533
No 368
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.63 E-value=0.015 Score=60.29 Aligned_cols=92 Identities=20% Similarity=0.189 Sum_probs=68.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|+|+ |.+|+.+++.|.+.+ .++.++++++++.+.+.++. .++.++.+|.+|++.++++ +++
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~-------~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~~~~ 297 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEG-------YSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEGIDE 297 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcCCcc
Confidence 467999998 999999999998876 78999999999887776643 2567899999999998665 678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC 115 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~ 115 (420)
+|.||.+..-- .....+...|.+.+.
T Consensus 298 a~~vi~~~~~~-~~n~~~~~~~~~~~~ 323 (453)
T PRK09496 298 ADAFIALTNDD-EANILSSLLAKRLGA 323 (453)
T ss_pred CCEEEECCCCc-HHHHHHHHHHHHhCC
Confidence 99998766521 111223344555655
No 369
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.61 E-value=0.015 Score=53.78 Aligned_cols=103 Identities=12% Similarity=0.247 Sum_probs=66.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh---------------------hHHHHHHHHhCCCCCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASPSHSLS 68 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~---------------------~kl~~~~~~l~~~~~~~ 68 (420)
..+|+|+|+.| +|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ..+.
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GV------g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~-lNp~ 90 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGI------DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQE-LNPN 90 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCC------CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHH-HCCC
Confidence 45799999866 99999999999983 4566666431 123233333321 1233
Q ss_pred ccE--EEEeCCC-HHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 69 IPI--LTADTTD-PPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~--i~~D~~d-~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+++ +..++.+ .+...+.++++|+||.|..+.. .-..+-+.|.+.++.++...
T Consensus 91 v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~-~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 91 VKLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYE-RTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred CEEEEEecccccchhhHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 443 3333432 4556778899999999877632 23556789999998887764
No 370
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.60 E-value=0.014 Score=60.33 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=64.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .++.+++|+.++.+.+.++++ .. +.+.+++.+.+.++
T Consensus 182 ~~~vlViGa-G~iG~~~a~~L~~~G~------~~V~v~~r~~~ra~~la~~~g------~~-----~~~~~~~~~~l~~a 243 (423)
T PRK00045 182 GKKVLVIGA-GEMGELVAKHLAEKGV------RKITVANRTLERAEELAEEFG------GE-----AIPLDELPEALAEA 243 (423)
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCC------CeEEEEeCCHHHHHHHHHHcC------Cc-----EeeHHHHHHHhccC
Confidence 457999987 9999999999988762 378999999999888877663 11 12335667778899
Q ss_pred CeeEeccCCCC-CCcHHHHHHHHHc----CCcEEecC
Q 014694 90 KLLLNCVGPYR-LHGDPVAAACVHS----GCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~-~~~~~vv~Ac~~~----g~~yvdis 121 (420)
|+||+|.|... ......++.+... ..-.+|++
T Consensus 244 DvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla 280 (423)
T PRK00045 244 DIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLA 280 (423)
T ss_pred CEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeC
Confidence 99999987432 2223334443321 23477774
No 371
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.59 E-value=0.016 Score=58.80 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=69.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
+..+|+|+|+ |.+|..++++|++.|- -++.+++.+ ..|.+.+.+.+.. ...-+
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gv------g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~ 112 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGV------GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR 112 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe
Confidence 3457999997 7799999999999883 477777764 2344444444432 01123
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+..+...+ +++.+.++++++|+||.|..-+.. -..+-++|.+.++.+|..
T Consensus 113 i~~~~~~i-~~~~~~~~~~~~DlVid~~Dn~~~-r~~in~~~~~~~iP~v~~ 162 (370)
T PRK05600 113 VNALRERL-TAENAVELLNGVDLVLDGSDSFAT-KFLVADAAEITGTPLVWG 162 (370)
T ss_pred eEEeeeec-CHHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 33444444 456788899999999999876432 234568899999877654
No 372
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.58 E-value=0.003 Score=62.40 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=74.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+|+ |..|+..++.++...+ ..++.+.+|+.++.+++.+++.. ..+.+. . +++++++.++|
T Consensus 126 ~~v~IiGa-G~qa~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~a~~~~~---~~~~~~---~---~~~~~av~~aD 190 (304)
T PRK07340 126 GDLLLIGT-GVQARAHLEAFAAGLP-----VRRVWVRGRTAASAAAFCAHARA---LGPTAE---P---LDGEAIPEAVD 190 (304)
T ss_pred CEEEEECC-cHHHHHHHHHHHHhCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCeeE---E---CCHHHHhhcCC
Confidence 47999986 9999999999986432 15799999999999999888741 122322 2 34567778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
+||+|.... ++++++-.+-|+|..-+....++.++
T Consensus 191 iVitaT~s~----~Pl~~~~~~~g~hi~~iGs~~p~~~E 225 (304)
T PRK07340 191 LVVTATTSR----TPVYPEAARAGRLVVAVGAFTPDMAE 225 (304)
T ss_pred EEEEccCCC----CceeCccCCCCCEEEecCCCCCCccc
Confidence 999988643 45666656788888888777776655
No 373
>PLN00203 glutamyl-tRNA reductase
Probab=96.56 E-value=0.021 Score=60.56 Aligned_cols=97 Identities=16% Similarity=0.204 Sum_probs=66.8
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .+|.+..|+.++.+.+.++++ +..+... ..+++.+.+.++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~------~~V~V~nRs~era~~La~~~~-----g~~i~~~---~~~dl~~al~~a 330 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC------TKMVVVNRSEERVAALREEFP-----DVEIIYK---PLDEMLACAAEA 330 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHhC-----CCceEee---cHhhHHHHHhcC
Confidence 457999998 9999999999998762 479999999999988887652 1222222 334567788999
Q ss_pred CeeEeccCCCCC-CcHHHHHHHHHc----C--CcEEecC
Q 014694 90 KLLLNCVGPYRL-HGDPVAAACVHS----G--CDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~-~~~~vv~Ac~~~----g--~~yvdis 121 (420)
|+||+|.+-... .....++.+... + .-+||++
T Consensus 331 DVVIsAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLA 369 (519)
T PLN00203 331 DVVFTSTSSETPLFLKEHVEALPPASDTVGGKRLFVDIS 369 (519)
T ss_pred CEEEEccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeC
Confidence 999998763222 234455554322 1 2478873
No 374
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.54 E-value=0.0078 Score=60.04 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+|+ |.+|+..++.++.... .-+|.+.+|++++.+++.+++.. ...+++.. + +++++++.++|
T Consensus 128 ~~v~iiGa-G~~a~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~~~~~~~--~~~~~~~~--~---~~~~~~~~~aD 194 (325)
T PRK08618 128 KTLCLIGT-GGQAKGQLEAVLAVRD-----IERVRVYSRTFEKAYAFAQEIQS--KFNTEIYV--V---NSADEAIEEAD 194 (325)
T ss_pred cEEEEECC-cHHHHHHHHHHHhcCC-----ccEEEEECCCHHHHHHHHHHHHH--hcCCcEEE--e---CCHHHHHhcCC
Confidence 46999985 8899998888775421 15899999999999988887641 11233332 2 23567778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFME 128 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~ 128 (420)
+||+|..-. .++++.+.+.|+|.+-+-...+.++
T Consensus 195 iVi~aT~s~----~p~i~~~l~~G~hV~~iGs~~p~~~ 228 (325)
T PRK08618 195 IIVTVTNAK----TPVFSEKLKKGVHINAVGSFMPDMQ 228 (325)
T ss_pred EEEEccCCC----CcchHHhcCCCcEEEecCCCCcccc
Confidence 999988532 3555577899999888866655544
No 375
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.54 E-value=0.0064 Score=51.42 Aligned_cols=98 Identities=12% Similarity=0.183 Sum_probs=59.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHhcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~-~i~~D~~d~~sl~~~~~~~ 89 (420)
+|.|+|++|.+|+.+++.|.++.. +++..+ +|+.++.+.+.... .++. ++..++ +.+.++ ..++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~------~~l~av~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~--~~~~ 66 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPD------FEVVALAASARSAGKRVSEAG-----PHLKGEVVLEL-EPEDFE--ELAV 66 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCC------ceEEEEEechhhcCcCHHHHC-----ccccccccccc-ccCChh--hcCC
Confidence 478999999999999999988631 555444 66544433333221 1121 111122 223333 2589
Q ss_pred CeeEeccCCCCCCcHHH---HHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPV---AAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~v---v~Ac~~~g~~yvdisge~~ 125 (420)
|+||-|+++-.. ..+ +..+.+.|..+||+|+...
T Consensus 67 DvV~~~~~~~~~--~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 67 DIVFLALPHGVS--KEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred CEEEEcCCcHHH--HHHHHHHHhhhcCCCEEEECCcccc
Confidence 999999976432 222 2345578999999997654
No 376
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.53 E-value=0.012 Score=58.08 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=63.4
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+++|+|+ |.+|+.+++.|.+.+ .+|.+.+|+.++.+.. ++++ ... . +.+++.+.+++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~G-------a~V~v~~r~~~~~~~~-~~~G------~~~--~---~~~~l~~~l~~ 210 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALG-------ANVTVGARKSAHLARI-TEMG------LSP--F---HLSELAEEVGK 210 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHH-HHcC------Cee--e---cHHHHHHHhCC
Confidence 3468999997 889999999999887 7899999998776443 3332 221 1 23567888899
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+|+||||+.+.. .....++.+ ..+.-.+|++..+
T Consensus 211 aDiVI~t~p~~~-i~~~~l~~~-~~g~vIIDla~~p 244 (296)
T PRK08306 211 IDIIFNTIPALV-LTKEVLSKM-PPEALIIDLASKP 244 (296)
T ss_pred CCEEEECCChhh-hhHHHHHcC-CCCcEEEEEccCC
Confidence 999999985421 122333222 3456678876443
No 377
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=96.53 E-value=0.028 Score=54.68 Aligned_cols=104 Identities=19% Similarity=0.219 Sum_probs=70.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
.+++|-|+|. |.+|+.+++.|.+..+ .+++ .+.+|++++.+++.++++. .. . ..+ +++++.
T Consensus 5 ~~irIGIIG~-G~IG~~~a~~L~~~~~-----~~el~aV~dr~~~~a~~~a~~~g~-----~~--~--~~~---~eell~ 66 (271)
T PRK13302 5 PELRVAIAGL-GAIGKAIAQALDRGLP-----GLTLSAVAVRDPQRHADFIWGLRR-----PP--P--VVP---LDQLAT 66 (271)
T ss_pred CeeEEEEECc-cHHHHHHHHHHHhcCC-----CeEEEEEECCCHHHHHHHHHhcCC-----Cc--c--cCC---HHHHhc
Confidence 3578999985 9999999999987411 1565 4788998888777665430 01 0 123 445567
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC-CcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS-GEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis-ge~~~~~~~~~ 132 (420)
++|+|+-|+.+... ..++..|.++|.|.+..+ +...-.+++++
T Consensus 67 ~~D~Vvi~tp~~~h--~e~~~~aL~aGk~Vi~~s~gal~~~~~L~~ 110 (271)
T PRK13302 67 HADIVVEAAPASVL--RAIVEPVLAAGKKAIVLSVGALLRNEDLID 110 (271)
T ss_pred CCCEEEECCCcHHH--HHHHHHHHHcCCcEEEecchhHHhHHHHHH
Confidence 89999999876433 677888899999977655 33333345544
No 378
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.50 E-value=0.017 Score=58.25 Aligned_cols=102 Identities=17% Similarity=0.251 Sum_probs=66.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
......|||+||+|.+|+.+++-+...+ ....++.++.+++ ++.++++. -...|..|++-++++.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~-------~~~v~t~~s~e~~-~l~k~lGA-------d~vvdy~~~~~~e~~k 219 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAG-------AIKVVTACSKEKL-ELVKKLGA-------DEVVDYKDENVVELIK 219 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcC-------CcEEEEEcccchH-HHHHHcCC-------cEeecCCCHHHHHHHH
Confidence 3445689999999999999987765554 3566677777777 56666652 2356888866666655
Q ss_pred h----ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 87 S----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 87 ~----~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+ +.|+|+.|+|.-.. ...+...+...+..||-+.|+.
T Consensus 220 k~~~~~~DvVlD~vg~~~~-~~~~~~l~~~g~~~~i~~~~~~ 260 (347)
T KOG1198|consen 220 KYTGKGVDVVLDCVGGSTL-TKSLSCLLKGGGGAYIGLVGDE 260 (347)
T ss_pred hhcCCCccEEEECCCCCcc-ccchhhhccCCceEEEEecccc
Confidence 5 48999999997322 1223333333344566665543
No 379
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.50 E-value=0.016 Score=60.88 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=50.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++.+++.+.+. ... .+..+ +.. +.+
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G-------~~V~i~~R~~~~~~~la~~~~------~~~--~~~~~---~~~-l~~ 390 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAG-------AELLIFNRTKAHAEALASRCQ------GKA--FPLES---LPE-LHR 390 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc------cce--echhH---hcc-cCC
Confidence 3457999996 899999999999987 688899999998887776542 111 12222 222 467
Q ss_pred cCeeEeccCC
Q 014694 89 TKLLLNCVGP 98 (420)
Q Consensus 89 ~dvVIn~aGp 98 (420)
+|+||||...
T Consensus 391 ~DiVInatP~ 400 (477)
T PRK09310 391 IDIIINCLPP 400 (477)
T ss_pred CCEEEEcCCC
Confidence 9999999854
No 380
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=96.49 E-value=0.0079 Score=58.05 Aligned_cols=82 Identities=18% Similarity=0.184 Sum_probs=61.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhH--HHHH-HHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQA-LQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~k--l~~~-~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
..+|+|-||+-|..+++.|++.| +.|..+.|..+. ...+ +-++......++.++.+|++|..+|.++++
T Consensus 4 ~ALITGITGQDGsYLa~lLLekG-------Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~ 76 (345)
T COG1089 4 VALITGITGQDGSYLAELLLEKG-------YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE 76 (345)
T ss_pred eEEEecccCCchHHHHHHHHhcC-------cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHh
Confidence 57999999999999999999998 888877775321 1111 111111123457789999999999999998
Q ss_pred -ccCeeEeccCCCC
Q 014694 88 -QTKLLLNCVGPYR 100 (420)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (420)
+.|.|.|.++..+
T Consensus 77 v~PdEIYNLaAQS~ 90 (345)
T COG1089 77 VQPDEIYNLAAQSH 90 (345)
T ss_pred cCchhheecccccc
Confidence 5789999998654
No 381
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.47 E-value=0.013 Score=60.96 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|.+|..+++.|.+.+ ++|.+.+|++++..+...+++ +. . ..+..+.+.++|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G-------~~V~v~~r~~~~~~~~a~~~g------v~-----~--~~~~~e~~~~aD 60 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKG-------FEVIVTGRDPKKGKEVAKELG------VE-----Y--ANDNIDAAKDAD 60 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHcC------Ce-----e--ccCHHHHhccCC
Confidence 479999999999999999999887 789999999888766655442 11 1 122455678899
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisge 123 (420)
+||-|+.+... ..+++... ..++-++|+++-
T Consensus 61 vVIlavp~~~~--~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 61 IVIISVPINVT--EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred EEEEecCHHHH--HHHHHHHHhhCCCCCEEEEcccc
Confidence 99998865322 34444433 345568888863
No 382
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.45 E-value=0.025 Score=58.43 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=66.1
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+|+|+|+ |-+|+.++++|...+. .+|.+.+|+.++.+++.++++. ..+ +.+++.+.+.++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~------~~V~v~~rs~~ra~~la~~~g~------~~i-----~~~~l~~~l~~a 241 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGV------GKILIANRTYERAEDLAKELGG------EAV-----KFEDLEEYLAEA 241 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcCC------eEe-----eHHHHHHHHhhC
Confidence 357999997 9999999999998762 5799999999998778776641 111 235677888899
Q ss_pred CeeEeccCCCC-CCcHHHHHHHHHcC---CcEEecC
Q 014694 90 KLLLNCVGPYR-LHGDPVAAACVHSG---CDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~-~~~~~vv~Ac~~~g---~~yvdis 121 (420)
|+||.|.+-.. ......++.+...+ .-.+|++
T Consensus 242 DvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla 277 (417)
T TIGR01035 242 DIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIA 277 (417)
T ss_pred CEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeC
Confidence 99999987432 22344555544322 2467774
No 383
>PRK14851 hypothetical protein; Provisional
Probab=96.40 E-value=0.019 Score=62.67 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=70.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~ 68 (420)
+..+|+|.|+ |.+|..+++.|++.|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 42 ~~~~VlIvG~-GGlGs~va~~Lar~GV------G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 42 AEAKVAIPGM-GGVGGVHLITMVRTGI------GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHhCC------CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 3458999996 7799999999999983 356666632 1344333333321 11223
Q ss_pred ccEEEEeCCCHHHHHHHHhccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 69 ~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
+..+...+ +++.+.++++++|+||+|.-.+.. ....+.++|.+.++.+|...
T Consensus 115 I~~~~~~i-~~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGI-NADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCC-ChHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 44455556 457788999999999999865432 22467889999999887653
No 384
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.37 E-value=0.045 Score=53.89 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=58.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-|+|. |.+|..+++.|++++ ++|.+.+|++++.+.+.+.-. . ...+.+++.+.+.++|
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g-------~~V~~~dr~~~~~~~l~~~g~-------~----~~~s~~~~~~~~~~~d 61 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRG-------HDCVGYDHDQDAVKAMKEDRT-------T----GVANLRELSQRLSAPR 61 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcCC-------c----ccCCHHHHHhhcCCCC
Confidence 46889985 999999999999987 789999999999877664211 0 1124445555556677
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisge 123 (420)
+||-|+-+. .-..+++... ..|.-+||.+..
T Consensus 62 vIi~~vp~~--~~~~v~~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 62 VVWVMVPHG--IVDAVLEELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred EEEEEcCch--HHHHHHHHHHhhCCCCCEEEECCCC
Confidence 777776442 1233333322 234446666543
No 385
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.36 E-value=0.019 Score=53.91 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=53.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+||+|.+|..++..|++.+ ++|.+.+|++++++.+.+..... ....+... +-..+ ..+.++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G-------~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~-~~~~~---~~ea~~~a 69 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG-------NKIIIGSRDLEKAEEAAAKALEELGHGGSDIK-VTGAD---NAEAAKRA 69 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-------CEEEEEEcCHHHHHHHHHHHHhhccccCCCce-EEEeC---hHHHHhcC
Confidence 579999999999999999999987 68888999999887766543100 00111110 11112 24557789
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||-++-+.
T Consensus 70 DvVilavp~~ 79 (219)
T TIGR01915 70 DVVILAVPWD 79 (219)
T ss_pred CEEEEECCHH
Confidence 9999988654
No 386
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.36 E-value=0.009 Score=58.91 Aligned_cols=33 Identities=9% Similarity=-0.074 Sum_probs=28.7
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecC
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs 50 (420)
..++||||+ ..||+.+++.|+++| .+|++.+|.
T Consensus 9 k~alITGa~~~~GIG~a~A~~la~~G-------a~Vvv~~~~ 43 (299)
T PRK06300 9 KIAFIAGIGDDQGYGWGIAKALAEAG-------ATILVGTWV 43 (299)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHCC-------CEEEEEecc
Confidence 369999995 789999999999998 899987654
No 387
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.35 E-value=0.016 Score=55.65 Aligned_cols=96 Identities=13% Similarity=0.222 Sum_probs=70.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
|+|+|+|||+ =|+.+++.|.+.+ . +.+..-..-.. ++... ......++.+-+.|.+.+.++++ +
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g-------~-v~~sv~t~~g~-~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~ 66 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAG-------Y-VIVSVATSYGG-ELLKP----ELPGLEVRVGRLGDEEGLAEFLRENG 66 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcC-------C-EEEEEEhhhhH-hhhcc----ccCCceEEECCCCCHHHHHHHHHhCC
Confidence 6899999997 5999999999987 4 33222221111 11110 11345677777769999999996 6
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
.+.||.+.-||.. ...++.+||.+.|+.|+-+
T Consensus 67 i~~vIDATHPfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 67 IDAVIDATHPFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred CcEEEECCCchHHHHHHHHHHHHhhcCcceEEE
Confidence 8999999999864 3689999999999999987
No 388
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.34 E-value=0.021 Score=54.17 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=67.4
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|+|. |.+|..+++.|++.|- -++.+++.+. .|.+.+.+.+.. -.+.++
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GV------g~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~-inP~~~ 82 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGV------GKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRD-INPECE 82 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHH-HCCCcE
Confidence 457999987 7799999999999983 4677766431 233333433321 112333
Q ss_pred E--EEEeCCCHHHHHHHHh-ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCC
Q 014694 71 I--LTADTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 71 ~--i~~D~~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisg 122 (420)
+ +...+ +++.+..++. +.|+||.|...... -..+.+.|.++++.+|..-|
T Consensus 83 V~~~~~~i-~~~~~~~l~~~~~D~VvdaiD~~~~-k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 83 VDAVEEFL-TPDNSEDLLGGDPDFVVDAIDSIRA-KVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred EEEeeeec-CHhHHHHHhcCCCCEEEEcCCCHHH-HHHHHHHHHHhCCCEEEEeC
Confidence 3 33333 3456666664 69999999875432 25688999999999888755
No 389
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=96.33 E-value=0.022 Score=60.67 Aligned_cols=70 Identities=19% Similarity=0.133 Sum_probs=50.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
.+++|+|| |.+|+.++..|++.+ .+|.++.|+.++.+.+.+++. ... .+.. ++.+. ...+
T Consensus 380 k~vlIlGa-GGagrAia~~L~~~G-------~~V~i~nR~~e~a~~la~~l~------~~~--~~~~---~~~~~~~~~~ 440 (529)
T PLN02520 380 KLFVVIGA-GGAGKALAYGAKEKG-------ARVVIANRTYERAKELADAVG------GQA--LTLA---DLENFHPEEG 440 (529)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC------Cce--eeHh---HhhhhccccC
Confidence 47999998 799999999999987 689999999999988877653 111 1222 22222 2357
Q ss_pred CeeEeccCCC
Q 014694 90 KLLLNCVGPY 99 (420)
Q Consensus 90 dvVIn~aGp~ 99 (420)
|+||||...-
T Consensus 441 diiINtT~vG 450 (529)
T PLN02520 441 MILANTTSVG 450 (529)
T ss_pred eEEEecccCC
Confidence 8999988643
No 390
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.32 E-value=0.011 Score=55.38 Aligned_cols=85 Identities=14% Similarity=0.180 Sum_probs=62.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~-- 88 (420)
++|+|+|++|.+|++|.+-+...+.+ +-+|...+.. .+|+++.++.++++++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~----~e~wvf~~sk----------------------d~DLt~~a~t~~lF~~ek 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFD----DENWVFIGSK----------------------DADLTNLADTRALFESEK 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCC----CcceEEeccc----------------------cccccchHHHHHHHhccC
Confidence 47999999999999999999888742 2578877642 2578888888888875
Q ss_pred cCeeEeccCC----CCC-------------CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGP----YRL-------------HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp----~~~-------------~~~~vv~Ac~~~g~~yvdis 121 (420)
...|||.|+- ++. ...+++..|-+.|+.-+-.|
T Consensus 56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsc 105 (315)
T KOG1431|consen 56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSC 105 (315)
T ss_pred CceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhh
Confidence 4567887752 221 13788889999888544333
No 391
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.30 E-value=0.06 Score=53.21 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=54.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHHhc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~---~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+|.|+|+ |.+|+.++..|+..+.. .++.+.+|+.++++.+..++... ......+ . ..+.+ .+++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~-----~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i-~--~~~~~----~l~~ 68 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIA-----DELVLIDINEEKAEGEALDLEDALAFLPSPVKI-K--AGDYS----DCKD 68 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHhHhhHHHHhhccCCCeEE-E--cCCHH----HhCC
Confidence 6999996 99999999999987621 37999999999988777766320 0111112 2 22322 3589
Q ss_pred cCeeEeccCCCCC
Q 014694 89 TKLLLNCVGPYRL 101 (420)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (420)
+|+||+++|.-..
T Consensus 69 aDIVIitag~~~~ 81 (306)
T cd05291 69 ADIVVITAGAPQK 81 (306)
T ss_pred CCEEEEccCCCCC
Confidence 9999999996543
No 392
>PRK04148 hypothetical protein; Provisional
Probab=96.29 E-value=0.033 Score=48.21 Aligned_cols=98 Identities=16% Similarity=0.151 Sum_probs=75.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|+++|. | .|..+++.|.+.+ .+|..++.++...+...+. .+.++..|+.+++ -++-++
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G-------~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~--~~~y~~ 77 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESG-------FDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN--LEIYKN 77 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC--HHHHhc
Confidence 3467999986 6 7899999999887 8999999999987665442 3688999999876 366788
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcE--EecCCcHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDY--LDISGEPE 125 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~y--vdisge~~ 125 (420)
+|+|..+--|-.. -.++++.+.+.+++. ..++||.+
T Consensus 78 a~liysirpp~el-~~~~~~la~~~~~~~~i~~l~~e~~ 115 (134)
T PRK04148 78 AKLIYSIRPPRDL-QPFILELAKKINVPLIIKPLSGEEP 115 (134)
T ss_pred CCEEEEeCCCHHH-HHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 9998877655433 378899999999974 44777763
No 393
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.28 E-value=0.026 Score=52.26 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=63.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
..+|+|.|+.| +|..+++.|+..|- -++.+.+.+ ..|.+.+.+.+.. ..+.+.
T Consensus 21 ~s~VlIiG~gg-lG~evak~La~~GV------g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~-lNp~v~ 92 (197)
T cd01492 21 SARILLIGLKG-LGAEIAKNLVLSGI------GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRA-LNPRVK 92 (197)
T ss_pred hCcEEEEcCCH-HHHHHHHHHHHcCC------CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHH-HCCCCE
Confidence 45799999855 99999999999983 456666643 1233333333321 112333
Q ss_pred --EEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 71 --ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 71 --~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+...+. +...+.++++|+||.|..+.. .-..+-+.|.+.++.++...
T Consensus 93 i~~~~~~~~--~~~~~~~~~~dvVi~~~~~~~-~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 93 VSVDTDDIS--EKPEEFFSQFDVVVATELSRA-ELVKINELCRKLGVKFYATG 142 (197)
T ss_pred EEEEecCcc--ccHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 3333333 234567889999998876532 23556788999998876653
No 394
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.21 E-value=0.029 Score=54.13 Aligned_cols=83 Identities=11% Similarity=0.043 Sum_probs=55.9
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCee
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvV 92 (420)
|.|+||+|.+|..++..|+..+.. ...++.+.++++++++....++..-...... ...-. ..++.+.++++|+|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~---~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~-~~i~~--~~d~~~~~~~aDiV 74 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVL---LAIELVLYDIDEEKLKGVAMDLQDAVEPLAD-IKVSI--TDDPYEAFKDADVV 74 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCC---cceEEEEEeCCcccchHHHHHHHHhhhhccC-cEEEE--CCchHHHhCCCCEE
Confidence 578999999999999999887610 0158999999998887777666420001101 11111 12356778999999
Q ss_pred EeccCCCCC
Q 014694 93 LNCVGPYRL 101 (420)
Q Consensus 93 In~aGp~~~ 101 (420)
|.++|.-..
T Consensus 75 v~t~~~~~~ 83 (263)
T cd00650 75 IITAGVGRK 83 (263)
T ss_pred EECCCCCCC
Confidence 999986543
No 395
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.18 E-value=0.017 Score=58.43 Aligned_cols=100 Identities=12% Similarity=0.118 Sum_probs=62.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|-|.||||++|+.+.+.++++.. + +..++..+..+.+.- .. ..+ .+-.....++.|+++ ++++|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~--f-~~~~l~~~ss~~sg~-~~-~~f-----~g~~~~v~~~~~~~~----~~~~D 67 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEEND--F-DLIEPVFFSTSQAGG-AA-PSF-----GGKEGTLQDAFDIDA----LKKLD 67 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCC--C-CcCcEEEecchhhCC-cc-ccc-----CCCcceEEecCChhH----hcCCC
Confidence 5799999999999999997887752 1 011244444322111 11 111 111234445555444 36799
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc--EEecCCcHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEPEF 126 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~--yvdisge~~~ 126 (420)
+|+.++|.- ....+...+.++|+. .||.|+....
T Consensus 68 ivf~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~fR~ 103 (369)
T PRK06598 68 IIITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTLRM 103 (369)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCCeEEEECChHHhC
Confidence 999998643 447777878889954 9999987643
No 396
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=96.16 E-value=0.034 Score=54.71 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=65.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRL- 85 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~- 85 (420)
++++|-|+| +|.+|+..+..+.+.. . +++ .++++++++. .+..++++ +... ..+.+.+.+.
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~--~----velvAVvdid~es~gla~A~~~G------i~~~---~~~ie~LL~~~ 66 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSE--H----LEPGAMVGIDPESDGLARARRLG------VATS---AEGIDGLLAMP 66 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCC--C----cEEEEEEeCChhhHHHHHHHHcC------CCcc---cCCHHHHHhCc
Confidence 568999999 8999999888887742 1 454 6778887642 23344332 2211 1233434332
Q ss_pred -HhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 86 -CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 86 -~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
+.+.|+|+.+++.... ......+.++|+|.||.+.-.
T Consensus 67 ~~~dIDiVf~AT~a~~H--~e~a~~a~eaGk~VID~sPA~ 104 (302)
T PRK08300 67 EFDDIDIVFDATSAGAH--VRHAAKLREAGIRAIDLTPAA 104 (302)
T ss_pred CCCCCCEEEECCCHHHH--HHHHHHHHHcCCeEEECCccc
Confidence 2568999999886533 677888899999999998554
No 397
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.16 E-value=0.032 Score=55.27 Aligned_cols=82 Identities=17% Similarity=0.039 Sum_probs=53.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+||+|.+|..++-.|+..+-. .++++.+.+ +++...-+|.. ......+..+. ..+++.+.++++|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~-----~elvLiDi~--~a~g~alDL~~-~~~~~~i~~~~--~~~~~y~~~~daD 70 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLV-----SELALYDIV--NTPGVAADLSH-INTPAKVTGYL--GPEELKKALKGAD 70 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----cEEEEEecC--ccceeehHhHh-CCCcceEEEec--CCCchHHhcCCCC
Confidence 58999999999999999988776521 478999988 44433333431 11112222111 1233667889999
Q ss_pred eeEeccCCCCCC
Q 014694 91 LLLNCVGPYRLH 102 (420)
Q Consensus 91 vVIn~aGp~~~~ 102 (420)
+||-++|.-...
T Consensus 71 ivvitaG~~~k~ 82 (310)
T cd01337 71 VVVIPAGVPRKP 82 (310)
T ss_pred EEEEeCCCCCCC
Confidence 999999975443
No 398
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=96.13 E-value=0.024 Score=53.04 Aligned_cols=101 Identities=17% Similarity=0.293 Sum_probs=70.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|.|. |.||+.+++.+... +-+ .-.+++.+|+.+|.+++...+.. ++. .++++++...|
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~-~~~---~e~v~v~D~~~ek~~~~~~~~~~----------~~~---s~ide~~~~~D 62 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDG-RVD---FELVAVYDRDEEKAKELEASVGR----------RCV---SDIDELIAEVD 62 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcC-Ccc---eeEEEEecCCHHHHHHHHhhcCC----------Ccc---ccHHHHhhccc
Confidence 46788875 99999999887643 111 13568889999999887766531 112 34667778999
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCcEEecC----CcHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDIS----GEPEFMERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis----ge~~~~~~~~ 131 (420)
+|+-||++-.. ...+.-+.++|.|++.+| .|+.+.+++.
T Consensus 63 lvVEaAS~~Av--~e~~~~~L~~g~d~iV~SVGALad~~l~erl~ 105 (255)
T COG1712 63 LVVEAASPEAV--REYVPKILKAGIDVIVMSVGALADEGLRERLR 105 (255)
T ss_pred eeeeeCCHHHH--HHHhHHHHhcCCCEEEEechhccChHHHHHHH
Confidence 99999997432 445556678999998876 3556666554
No 399
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.10 E-value=0.033 Score=53.42 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=71.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--c
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~--~ 88 (420)
++|+|+|||+ =|+.+++.|.+.+ +++.+..-..... . ......+..+-+.|.+.+.++++ +
T Consensus 3 ~~IlvlgGT~-egr~la~~L~~~g-------~~v~~Svat~~g~---~------~~~~~~v~~G~l~~~~~l~~~l~~~~ 65 (248)
T PRK08057 3 PRILLLGGTS-EARALARALAAAG-------VDIVLSLAGRTGG---P------ADLPGPVRVGGFGGAEGLAAYLREEG 65 (248)
T ss_pred ceEEEEechH-HHHHHHHHHHhCC-------CeEEEEEccCCCC---c------ccCCceEEECCCCCHHHHHHHHHHCC
Confidence 4799999997 5999999998876 4554433322211 1 12345677777779999999997 6
Q ss_pred cCeeEeccCCCCC-CcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdis 121 (420)
.++||...-||.. ...++.++|.+.++.|+-+-
T Consensus 66 i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 66 IDLVIDATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred CCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 8999999999864 36899999999999999883
No 400
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.08 E-value=0.041 Score=52.33 Aligned_cols=101 Identities=9% Similarity=0.098 Sum_probs=64.0
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-------------------hHHHHHHHHhCC-CCCCCccE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSIPI 71 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-------------------~kl~~~~~~l~~-~~~~~~~~ 71 (420)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ....++..
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gv------g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~ 73 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGF------GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVP 73 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEE
Confidence 4889986 7799999999999873 4677766531 233333333321 01123334
Q ss_pred EEEeCCCHHHH-HHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 72 LTADTTDPPSL-HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 72 i~~D~~d~~sl-~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
+..++.+.+.. ...+++.|+||++..-... ...+-+.|.+.++.+|+.
T Consensus 74 ~~~~i~~~~~~~~~f~~~~DvVi~a~Dn~~a-R~~ln~~c~~~~iplI~~ 122 (234)
T cd01484 74 YQNKVGPEQDFNDTFFEQFHIIVNALDNIIA-RRYVNGMLIFLIVPLIES 122 (234)
T ss_pred EeccCChhhhchHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEE
Confidence 44555443332 4678999999999764332 245678899888888875
No 401
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.08 E-value=0.035 Score=56.91 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=66.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ..+.+
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~-~np~v 112 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGV------GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVE-INPLV 112 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHH-hCCCc
Confidence 3457999997 7799999999999883 356666533 1233333333321 12333
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...++ .+.+.++++++|+||.|..-+. ....+-++|.+.++.+|..
T Consensus 113 ~i~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~~~-~r~~ln~~~~~~~~p~v~~ 163 (392)
T PRK07878 113 NVRLHEFRLD-PSNAVELFSQYDLILDGTDNFA-TRYLVNDAAVLAGKPYVWG 163 (392)
T ss_pred EEEEEeccCC-hhHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEE
Confidence 33 334443 4567788999999999986542 1234668999999988764
No 402
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.06 E-value=0.033 Score=59.73 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=59.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~~ 89 (420)
-+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ .+...+.+|.+|++.++++ ++++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g-------~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~i~~a 482 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAG-------IPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAHLDCA 482 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcCcccc
Confidence 46888886 889999999999987 789999999999877653 2578999999999998876 6789
Q ss_pred CeeEeccC
Q 014694 90 KLLLNCVG 97 (420)
Q Consensus 90 dvVIn~aG 97 (420)
|.||-+.+
T Consensus 483 ~~viv~~~ 490 (558)
T PRK10669 483 RWLLLTIP 490 (558)
T ss_pred CEEEEEcC
Confidence 98776654
No 403
>PLN02602 lactate dehydrogenase
Probab=96.04 E-value=0.17 Score=51.04 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=56.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++.+|.|+|| |.+|..++-.|+..+-. -++.+.+.++++++....++.. ...... .+..+ .|. +.+
T Consensus 36 ~~~KI~IIGa-G~VG~~~a~~l~~~~l~-----~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy----~~~ 103 (350)
T PLN02602 36 RHTKVSVVGV-GNVGMAIAQTILTQDLA-----DELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDY----AVT 103 (350)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCH----HHh
Confidence 3379999996 99999999998876521 4799999999888776666642 011122 22221 232 238
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||-++|.-...
T Consensus 104 ~daDiVVitAG~~~k~ 119 (350)
T PLN02602 104 AGSDLCIVTAGARQIP 119 (350)
T ss_pred CCCCEEEECCCCCCCc
Confidence 8999999999975443
No 404
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.04 E-value=0.054 Score=53.70 Aligned_cols=80 Identities=19% Similarity=0.157 Sum_probs=50.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~-~~~~~~~i~~D~~d~~sl~~~~~ 87 (420)
|+|.|+||||++|..++..|+..+. ..++.+.+|+. ++++....++... ....... .....+ +. +.++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-----~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~-~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-----VKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DL-SDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CH-HHhC
Confidence 5899999999999999999998862 13688899955 5554443333210 0011111 122221 12 3489
Q ss_pred ccCeeEeccCCC
Q 014694 88 QTKLLLNCVGPY 99 (420)
Q Consensus 88 ~~dvVIn~aGp~ 99 (420)
++|+||-|+|..
T Consensus 72 ~aDiViitag~p 83 (309)
T cd05294 72 GSDIVIITAGVP 83 (309)
T ss_pred CCCEEEEecCCC
Confidence 999999999953
No 405
>PRK14852 hypothetical protein; Provisional
Probab=96.04 E-value=0.037 Score=62.14 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=69.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCCCCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~~~~~~~ 69 (420)
+..+|+|.|. |.+|..+++.|+..|- -++.+++-+ ..|.+.+.+.+.. -.+.+
T Consensus 331 ~~srVlVvGl-GGlGs~ia~~LAraGV------G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~-INP~v 402 (989)
T PRK14852 331 LRSRVAIAGL-GGVGGIHLMTLARTGI------GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALS-VNPFL 402 (989)
T ss_pred hcCcEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHH-HCCCC
Confidence 3457999996 6799999999999983 356665532 1344334333321 12344
Q ss_pred cE--EEEeCCCHHHHHHHHhccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 70 PI--LTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 70 ~~--i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
++ +...+ +++.++++++++|+||.|...+.. ....+.++|.+.++.+|..
T Consensus 403 ~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~a 455 (989)
T PRK14852 403 DIRSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITA 455 (989)
T ss_pred eEEEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEe
Confidence 44 43344 567889999999999999875432 2257788999999987764
No 406
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.04 E-value=0.038 Score=54.79 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=67.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~~~ 71 (420)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+ ..|.+.+.+.+.. ...-++..
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv------g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~ 73 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF------GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVA 73 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC------CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEE
Confidence 4899997 7899999999999883 467776643 1233333333321 01223444
Q ss_pred EEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 72 i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+..++.+.....+.+++.|+||++...... ...+-+.|.++++.+|+..
T Consensus 74 ~~~~i~~~~~~~~f~~~~DvVv~a~Dn~~a-r~~in~~c~~~~ip~I~~g 122 (312)
T cd01489 74 YHANIKDPDFNVEFFKQFDLVFNALDNLAA-RRHVNKMCLAADVPLIESG 122 (312)
T ss_pred EeccCCCccchHHHHhcCCEEEECCCCHHH-HHHHHHHHHHCCCCEEEEe
Confidence 455666544455788999999999875432 3557789999999998853
No 407
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.02 E-value=0.039 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=57.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.+|+||.+|..+++.|++.+ ++|.+..|+ +++++...+.+.. . + ...+...+++.+|
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag-------~eV~igs~r~~~~~~a~a~~l~~------~-i-----~~~~~~dA~~~aD 62 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAG-------HEVIIGSSRGPKALAAAAAALGP------L-I-----TGGSNEDAAALAD 62 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCC-------CeEEEecCCChhHHHHHHHhhcc------c-c-----ccCChHHHHhcCC
Confidence 45566778999999999999998 789998654 5566666666541 1 1 1234566778899
Q ss_pred eeEeccCCCCCCcHHHHHHHHH-c-CCcEEecC
Q 014694 91 LLLNCVGPYRLHGDPVAAACVH-S-GCDYLDIS 121 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~-~-g~~yvdis 121 (420)
|||-++ ||... ..+++...+ . +.-.||.+
T Consensus 63 VVvLAV-P~~a~-~~v~~~l~~~~~~KIvID~t 93 (211)
T COG2085 63 VVVLAV-PFEAI-PDVLAELRDALGGKIVIDAT 93 (211)
T ss_pred EEEEec-cHHHH-HhHHHHHHHHhCCeEEEecC
Confidence 999877 55432 233333322 2 34566665
No 408
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=95.99 E-value=0.055 Score=56.10 Aligned_cols=92 Identities=13% Similarity=0.013 Sum_probs=60.4
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCC--CCCcceEEEEecChhHHHHHHHHhCCCCCCC-ccEEEEeCCCHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFP--SSPIKSLALAGRNPTRVKQALQWASPSHSLS-IPILTADTTDPPSLH 83 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~--~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~-~~~i~~D~~d~~sl~ 83 (420)
..++.+|.|+||+|.+|.+++-.|+...-.+ .....++.+.++++++++...-++......- ..+... ..| .
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~----y 171 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDP----Y 171 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCC----H
Confidence 4467899999999999999999998771100 0011478999999999887776664200000 122211 123 4
Q ss_pred HHHhccCeeEeccCCCCCCc
Q 014694 84 RLCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~ 103 (420)
+.++++|+||-++|.-...|
T Consensus 172 e~~kdaDiVVitAG~prkpG 191 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGPG 191 (444)
T ss_pred HHhCcCCEEEECCCCCCCCC
Confidence 56789999999999754433
No 409
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.96 E-value=0.077 Score=52.20 Aligned_cols=102 Identities=13% Similarity=0.000 Sum_probs=61.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ . .. ..+++++.+-+.++|
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~--~~--~~s~~~~~~~~~~ad 61 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDG-------HEVVGYDVNQEAVDVAGK-LG------I--TA--RHSLEELVSKLEAPR 61 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHH-CC------C--ee--cCCHHHHHHhCCCCC
Confidence 3688887 5999999999999987 788999999998876543 21 1 11 123332222222367
Q ss_pred eeEeccCCCCCCcHHHHHHHH---HcCCcEEecCC-cHHHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISG-EPEFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~---~~g~~yvdisg-e~~~~~~~~~ 132 (420)
+||.|+.+... -+.+++... ..|.-+||.|. .+...+++.+
T Consensus 62 vVi~~vp~~~~-~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~~~ 106 (299)
T PRK12490 62 TIWVMVPAGEV-TESVIKDLYPLLSPGDIVVDGGNSRYKDDLRRAE 106 (299)
T ss_pred EEEEEecCchH-HHHHHHHHhccCCCCCEEEECCCCCchhHHHHHH
Confidence 88777754311 133333322 23445788754 4555566554
No 410
>PRK05442 malate dehydrogenase; Provisional
Probab=95.96 E-value=0.034 Score=55.50 Aligned_cols=87 Identities=13% Similarity=0.006 Sum_probs=54.3
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~sl 82 (420)
.++.+|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.. +...++. +. ...
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i~------~~~ 74 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-IT------DDP 74 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-Ee------cCh
Confidence 45679999999999999999988875421100113789999854 345444444431 0001221 11 123
Q ss_pred HHHHhccCeeEeccCCCCC
Q 014694 83 HRLCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~ 101 (420)
.+.++++|+||-++|....
T Consensus 75 y~~~~daDiVVitaG~~~k 93 (326)
T PRK05442 75 NVAFKDADVALLVGARPRG 93 (326)
T ss_pred HHHhCCCCEEEEeCCCCCC
Confidence 5678899999999996543
No 411
>PRK07411 hypothetical protein; Validated
Probab=95.96 E-value=0.038 Score=56.59 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=66.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs-------------------~~kl~~~~~~l~~-~~~~~~ 69 (420)
..+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gv------g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v 110 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGI------GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQV 110 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeE
Confidence 457999998 6699999999999983 356666543 1233344444421 011233
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
..+...++ ++...++++++|+||.|...+.. -..+-++|.+.++.+|.
T Consensus 111 ~~~~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~-r~~ln~~~~~~~~p~v~ 158 (390)
T PRK07411 111 DLYETRLS-SENALDILAPYDVVVDGTDNFPT-RYLVNDACVLLNKPNVY 158 (390)
T ss_pred EEEecccC-HHhHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEE
Confidence 33444443 45677889999999999886532 24566899999988765
No 412
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.95 E-value=0.03 Score=55.84 Aligned_cols=91 Identities=12% Similarity=-0.020 Sum_probs=55.2
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~--~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
++++|.|+||+|.+|..++..|+..+-.+.....++.+.++++ ++++....++......-..-+.... ...+.+
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~----~~~~~~ 76 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD----DPNVAF 76 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec----CcHHHh
Confidence 3679999999999999999998876521101113789999854 3355444444310000001011211 225678
Q ss_pred hccCeeEeccCCCCCCc
Q 014694 87 SQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (420)
+++|+||.++|.....+
T Consensus 77 ~daDivvitaG~~~k~g 93 (322)
T cd01338 77 KDADWALLVGAKPRGPG 93 (322)
T ss_pred CCCCEEEEeCCCCCCCC
Confidence 89999999999755433
No 413
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.92 E-value=0.056 Score=52.57 Aligned_cols=44 Identities=18% Similarity=0.055 Sum_probs=37.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA 61 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l 61 (420)
.+++|+|| |..++.++..|++.+. .++.++.|+.++.+++.+.+
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGF------TDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHh
Confidence 37999997 8899999999998872 47999999999998887755
No 414
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.86 E-value=0.12 Score=51.40 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=55.6
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.++|.|+|| |.+|..++..|+..+- .-++.+.++++++++....++.... .....-+.+ ..|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-----~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-----ADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHH----HhCC
Confidence 458999997 9999999998887752 1479999999888776666664200 011112222 12332 3789
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||.++|.....
T Consensus 72 adivvitaG~~~k~ 85 (312)
T cd05293 72 SKVVIVTAGARQNE 85 (312)
T ss_pred CCEEEECCCCCCCC
Confidence 99999999975543
No 415
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=95.85 E-value=0.067 Score=53.42 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=64.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-.|+|+|+. .+|...+++....+ .+|++.+|+++|++ ++++++ .+.+ .|..|++.++++-+.+|
T Consensus 168 ~~V~I~G~G-GlGh~avQ~Aka~g-------a~Via~~~~~~K~e-~a~~lG------Ad~~-i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 168 KWVAVVGAG-GLGHMAVQYAKAMG-------AEVIAITRSEEKLE-LAKKLG------ADHV-INSSDSDALEAVKEIAD 231 (339)
T ss_pred CEEEEECCc-HHHHHHHHHHHHcC-------CeEEEEeCChHHHH-HHHHhC------CcEE-EEcCCchhhHHhHhhCc
Confidence 469999985 89999999988887 79999999999984 555564 1222 33336666677666699
Q ss_pred eeEeccCCCCCCcHHHHHHHHHcCCc
Q 014694 91 LLLNCVGPYRLHGDPVAAACVHSGCD 116 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~~g~~ 116 (420)
++|+++++ ..-.+.+++....|+.
T Consensus 232 ~ii~tv~~--~~~~~~l~~l~~~G~~ 255 (339)
T COG1064 232 AIIDTVGP--ATLEPSLKALRRGGTL 255 (339)
T ss_pred EEEECCCh--hhHHHHHHHHhcCCEE
Confidence 99999993 2336667777777763
No 416
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.85 E-value=0.025 Score=56.59 Aligned_cols=102 Identities=15% Similarity=0.279 Sum_probs=68.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+|+ |..|+..+..+....+ ..++.+.+|+.++.+++.+++.. ..++.+... +++++++.++|
T Consensus 133 ~~v~IiGa-G~~a~~~~~al~~~~~-----~~~V~v~~R~~~~a~~l~~~~~~--~~g~~v~~~-----~d~~~al~~aD 199 (330)
T PRK08291 133 SRAAVIGA-GEQARLQLEALTLVRP-----IREVRVWARDAAKAEAYAADLRA--ELGIPVTVA-----RDVHEAVAGAD 199 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHhh--ccCceEEEe-----CCHHHHHccCC
Confidence 47999987 7789999998876431 15799999999999999887742 112332222 23677788999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+||++.... ++++++ ..+.|+|...+....+..++
T Consensus 200 iVi~aT~s~----~p~i~~~~l~~g~~v~~vg~d~~~~rE 235 (330)
T PRK08291 200 IIVTTTPSE----EPILKAEWLHPGLHVTAMGSDAEHKNE 235 (330)
T ss_pred EEEEeeCCC----CcEecHHHcCCCceEEeeCCCCCCccc
Confidence 999987532 455654 35777876665444444433
No 417
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.84 E-value=0.009 Score=59.65 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=69.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+++|+|+ |..|+..++.|+...+ .-++.+.+|+.++.+++.+++.. ...+++.. . +++++.+.++|
T Consensus 130 ~~v~iiGa-G~qA~~~~~al~~~~~-----i~~v~V~~R~~~~a~~~a~~~~~--~~g~~v~~--~---~~~~~av~~aD 196 (326)
T TIGR02992 130 SVVAIFGA-GMQARLQLEALTLVRD-----IRSARIWARDSAKAEALALQLSS--LLGIDVTA--A---TDPRAAMSGAD 196 (326)
T ss_pred cEEEEECC-CHHHHHHHHHHHHhCC-----ccEEEEECCCHHHHHHHHHHHHh--hcCceEEE--e---CCHHHHhccCC
Confidence 46899986 8999999999975431 14799999999999998887741 11233222 2 34677788999
Q ss_pred eeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCcHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFME 128 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge~~~~~ 128 (420)
+||+|.... ++++. ...+.|+|...+....+..+
T Consensus 197 iVvtaT~s~----~p~i~~~~l~~g~~i~~vg~~~p~~r 231 (326)
T TIGR02992 197 IIVTTTPSE----TPILHAEWLEPGQHVTAMGSDAEHKN 231 (326)
T ss_pred EEEEecCCC----CcEecHHHcCCCcEEEeeCCCCCCce
Confidence 999998542 35553 45678888776655444443
No 418
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.84 E-value=0.052 Score=54.60 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=65.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCC----CCCcc-EEEEeCCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSH----SLSIP-ILTADTTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~----~~~~~-~i~~D~~d~~sl~~ 84 (420)
++|.|.|+ |-+|+.+++.+.++.. +++ .+.+++.+....+++..+... ..... +-..++.-...++.
T Consensus 2 ikVaI~G~-GrIGr~va~al~~~~d------~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~e 74 (341)
T PRK04207 2 IKVGVNGY-GTIGKRVADAVAAQPD------MELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIED 74 (341)
T ss_pred eEEEEECC-CHHHHHHHHHHhcCCC------cEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhH
Confidence 58999999 9999999998877531 555 445556555555554332100 00000 00000000122455
Q ss_pred HHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCc
Q 014694 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
++.++|+||.|.+++. .....+.|.++|++.|+-+++
T Consensus 75 l~~~vDVVIdaT~~~~--~~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 75 LLEKADIVVDATPGGV--GAKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred hhccCCEEEECCCchh--hHHHHHHHHHCCCEEEEcCCC
Confidence 5678999999998864 467888999999999999886
No 419
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=95.84 E-value=0.015 Score=54.96 Aligned_cols=67 Identities=13% Similarity=0.165 Sum_probs=47.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-----
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----- 87 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----- 87 (420)
.+=-.+||++|+.+|++|++.| ++|++.+|.. .+ . ......+|+.+.+++.++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~G-------a~Vvlv~~~~-~l-------~-----~~~~~~~Dv~d~~s~~~l~~~v~~~ 77 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAG-------HEVTLVTTKR-AL-------K-----PEPHPNLSIREIETTKDLLITLKEL 77 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCC-------CEEEEEcChh-hc-------c-----cccCCcceeecHHHHHHHHHHHHHH
Confidence 3333468999999999999998 7898887631 11 1 00113478888887777653
Q ss_pred --ccCeeEeccCCC
Q 014694 88 --QTKLLLNCVGPY 99 (420)
Q Consensus 88 --~~dvVIn~aGp~ 99 (420)
..|++||+||..
T Consensus 78 ~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 78 VQEHDILIHSMAVS 91 (227)
T ss_pred cCCCCEEEECCEec
Confidence 579999999964
No 420
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.80 E-value=0.055 Score=52.89 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=61.9
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ .. ...+..++++++|+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G-------~~V~~~dr~~~~~~~~~~-~g------~~-------~~~~~~~~~~~aDi 58 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAG-------YQLHVTTIGPEVADELLA-AG------AV-------TAETARQVTEQADV 58 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHH-CC------Cc-------ccCCHHHHHhcCCE
Confidence 377887 5999999999999987 789999999988876543 11 11 11235677889999
Q ss_pred eEeccCCCCCCcHHHH---HHHH---HcCCcEEecCCcHH-HHHHHH
Q 014694 92 LLNCVGPYRLHGDPVA---AACV---HSGCDYLDISGEPE-FMERME 131 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv---~Ac~---~~g~~yvdisge~~-~~~~~~ 131 (420)
||.|+..... -..++ +.+. ..++.+||.|.-.+ -.+++.
T Consensus 59 vi~~vp~~~~-~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l~ 104 (291)
T TIGR01505 59 IFTMVPDSPQ-VEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRFA 104 (291)
T ss_pred EEEecCCHHH-HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHH
Confidence 9998853211 11222 1111 34556888765444 334443
No 421
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.80 E-value=0.081 Score=57.29 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANK-------MRITVLERDISAVNLMRK-------YGYKVYYGDATQLELLRAAGAEK 464 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEeeCCCHHHHHhcCCcc
Confidence 357888885 889999999999887 789999999999876643 2467899999999999987 779
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCC--cEEecCCcHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGEPEFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~--~yvdisge~~~~~~~~ 131 (420)
+|.||-+.+-. .....++..+.+..- +.+--+.+..-.+.+.
T Consensus 465 A~~vv~~~~d~-~~n~~i~~~~r~~~p~~~IiaRa~~~~~~~~L~ 508 (601)
T PRK03659 465 AEAIVITCNEP-EDTMKIVELCQQHFPHLHILARARGRVEAHELL 508 (601)
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 99998887532 222455566665543 3333444554444444
No 422
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=95.75 E-value=0.036 Score=56.72 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=54.2
Q ss_pred cceEEEEcC----------------CcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 014694 10 LFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (420)
Q Consensus 10 ~~~IvV~GA----------------TG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~ 73 (420)
..+|+|+|| ||.+|..+++++..+| .+|.+..++.+.. . .. .+..
T Consensus 185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-------a~V~~~~g~~~~~------~----~~--~~~~ 245 (390)
T TIGR00521 185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-------ADVTLITGPVSLL------T----PP--GVKS 245 (390)
T ss_pred CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-------CEEEEeCCCCccC------C----CC--CcEE
Confidence 457999998 4679999999999998 7888877654321 1 11 3356
Q ss_pred EeCCCHHHH-HHHH----hccCeeEeccCCCCC
Q 014694 74 ADTTDPPSL-HRLC----SQTKLLLNCVGPYRL 101 (420)
Q Consensus 74 ~D~~d~~sl-~~~~----~~~dvVIn~aGp~~~ 101 (420)
+|+.+.+++ ++++ .+.|++||+||....
T Consensus 246 ~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 246 IKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred EEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 899988887 5444 368999999998654
No 423
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.72 E-value=0.047 Score=48.42 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=59.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCccE---EEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPI---LTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~~---i~~D~~d~~sl~~~~~ 87 (420)
+|.|+|| |-.|..++..|+.++ .+|.+.+|+++..+.+.+.-.. ....++.+ +.+ ..+++++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g-------~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~----t~dl~~a~~ 68 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNG-------HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA----TTDLEEALE 68 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCT-------EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE----ESSHHHHHT
T ss_pred CEEEECc-CHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc----ccCHHHHhC
Confidence 5899997 889999999999998 8999999999888777654321 00111111 222 134678889
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHH---cCCcEEecC
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVH---SGCDYLDIS 121 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdis 121 (420)
++|+||-++-.+.. +.+++.... .+...|.++
T Consensus 69 ~ad~IiiavPs~~~--~~~~~~l~~~l~~~~~ii~~~ 103 (157)
T PF01210_consen 69 DADIIIIAVPSQAH--REVLEQLAPYLKKGQIIISAT 103 (157)
T ss_dssp T-SEEEE-S-GGGH--HHHHHHHTTTSHTT-EEEETS
T ss_pred cccEEEecccHHHH--HHHHHHHhhccCCCCEEEEec
Confidence 99999877743322 444444432 344455544
No 424
>PRK06153 hypothetical protein; Provisional
Probab=95.70 E-value=0.059 Score=54.66 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=62.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----------------------hhHHHHHHHHhCCCCCC
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASPSHSL 67 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----------------------~~kl~~~~~~l~~~~~~ 67 (420)
..+|+|.|+ |.+|..+++.|++.+- -++.+++-+ ..|.+.+.+.+.. ...
T Consensus 176 ~~~VaIVG~-GG~GS~Va~~LAR~GV------geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-in~ 247 (393)
T PRK06153 176 GQRIAIIGL-GGTGSYILDLVAKTPV------REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-MRR 247 (393)
T ss_pred hCcEEEEcC-CccHHHHHHHHHHcCC------CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH-hCC
Confidence 347999997 6799999999999883 456665532 1333333333321 112
Q ss_pred CccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEec
Q 014694 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 68 ~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdi 120 (420)
++..+...+ +++.+. .+.++|+||-|+.-... -.-+.++|.+.++.+||+
T Consensus 248 ~I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a-R~~ln~~a~~~gIP~Id~ 297 (393)
T PRK06153 248 GIVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS-RKLIVDYLEALGIPFIDV 297 (393)
T ss_pred eEEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEe
Confidence 343344444 555554 56889999998864321 244568888888888876
No 425
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.68 E-value=0.12 Score=50.80 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=35.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQ 59 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~ 59 (420)
|+|.|+| .|-+|+.+++.|++.+ ++|.+.+|++++.+.+.+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~ 41 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGG-------HEVVGYDRNPEAVEALAE 41 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHH
Confidence 4688887 5999999999999987 789999999998877643
No 426
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=95.67 E-value=0.045 Score=54.04 Aligned_cols=79 Identities=16% Similarity=0.194 Sum_probs=52.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~-~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
|+|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++++.+...... ...... ...+.-..+.++.++++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 72 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNG-------HDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADA 72 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCC
Confidence 47999986 999999999999987 789999999988877665321000 000000 00011112345567789
Q ss_pred CeeEeccCC
Q 014694 90 KLLLNCVGP 98 (420)
Q Consensus 90 dvVIn~aGp 98 (420)
|+||-|+.+
T Consensus 73 D~vi~~v~~ 81 (325)
T PRK00094 73 DLILVAVPS 81 (325)
T ss_pred CEEEEeCCH
Confidence 999999876
No 427
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=95.66 E-value=0.11 Score=53.02 Aligned_cols=92 Identities=12% Similarity=-0.003 Sum_probs=57.6
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia--gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~ 84 (420)
..++.+|.|+||+|.+|..++-.|+..+-.+....+.+.+. ++++++++....++......-..-+..-..| .+
T Consensus 41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~----y~ 116 (387)
T TIGR01757 41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP----YE 116 (387)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC----HH
Confidence 44678999999999999999999987763110001233344 8899998877766642000001111111122 46
Q ss_pred HHhccCeeEeccCCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~ 102 (420)
.++++|+||.++|.....
T Consensus 117 ~~kdaDIVVitAG~prkp 134 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGP 134 (387)
T ss_pred HhCCCCEEEECCCCCCCC
Confidence 688999999999975443
No 428
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.62 E-value=0.085 Score=51.86 Aligned_cols=98 Identities=16% Similarity=0.174 Sum_probs=64.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+++.+. + .. ...+..++++++|+
T Consensus 3 ~Ig~IG-lG~mG~~mA~~l~~~G-------~~V~v~d~~~~~~~~~~~~-g------~~-------~~~s~~~~~~~aDv 60 (296)
T PRK15461 3 AIAFIG-LGQMGSPMASNLLKQG-------HQLQVFDVNPQAVDALVDK-G------AT-------PAASPAQAAAGAEF 60 (296)
T ss_pred eEEEEe-eCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHc-C------Cc-------ccCCHHHHHhcCCE
Confidence 688887 5999999999999987 7899999999998766542 1 11 11234567788999
Q ss_pred eEeccCCCCCCcHHHHH------HHHHcCCcEEecC-CcHHHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAA------ACVHSGCDYLDIS-GEPEFMERMEA 132 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~------Ac~~~g~~yvdis-ge~~~~~~~~~ 132 (420)
||-|+.+.... ..++. .....+.-+||.| +.+...+++..
T Consensus 61 Vi~~vp~~~~~-~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~ 107 (296)
T PRK15461 61 VITMLPNGDLV-RSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIA 107 (296)
T ss_pred EEEecCCHHHH-HHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHHHH
Confidence 99888653211 12211 1123445578876 66666666655
No 429
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.57 E-value=0.068 Score=50.54 Aligned_cols=94 Identities=12% Similarity=0.140 Sum_probs=60.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC----hhHH-------HHHHHHhCCCCCCCccEEEEeCC
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRV-------KQALQWASPSHSLSIPILTADTT 77 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs----~~kl-------~~~~~~l~~~~~~~~~~i~~D~~ 77 (420)
+..+|+|+|| |..|+.++..|.+.+-. ..++.+.+|+ .++. +.+.+... .. . .+
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~----~~-~---~~-- 88 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETN----PE-K---TG-- 88 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhc----cC-c---cc--
Confidence 3458999998 88999999999988720 0169999998 4432 22222221 00 0 11
Q ss_pred CHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 78 DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++.+.++++|+|||+.++... ...+++...+..+.| +++
T Consensus 89 --~~l~~~l~~~dvlIgaT~~G~~-~~~~l~~m~~~~ivf-~ls 128 (226)
T cd05311 89 --GTLKEALKGADVFIGVSRPGVV-KKEMIKKMAKDPIVF-ALA 128 (226)
T ss_pred --CCHHHHHhcCCEEEeCCCCCCC-CHHHHHhhCCCCEEE-EeC
Confidence 2355667789999999986543 356667665544455 666
No 430
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.56 E-value=0.12 Score=52.38 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=68.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEE--EecChhHHHHHHHHhCCCCCCCccEE-EEeC------------
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL--AGRNPTRVKQALQWASPSHSLSIPIL-TADT------------ 76 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~i--agRs~~kl~~~~~~l~~~~~~~~~~i-~~D~------------ 76 (420)
+|.|+|+||-||+..++-+.++.. . ++|.. +++|.+++.+..++++. +++ ..|-
T Consensus 3 ~VaILGsTGSIG~~tL~vi~~~p~-~----f~VvaLaa~~n~~~l~~q~~~f~p------~~v~i~~~~~~~~l~~~l~~ 71 (385)
T PRK05447 3 RITILGSTGSIGTQTLDVIRRNPD-R----FRVVALSAGKNVELLAEQAREFRP------KYVVVADEEAAKELKEALAA 71 (385)
T ss_pred eEEEEcCChHHHHHHHHHHHhCcc-c----cEEEEEEcCCCHHHHHHHHHHhCC------CEEEEcCHHHHHHHHHhhcc
Confidence 699999999999999888766531 2 55533 37889999888887752 111 1111
Q ss_pred ------CCHHHHHHHHh--ccCeeEeccCCCCCC------------------------cHHHHHHHHHcCCcEEecCCcH
Q 014694 77 ------TDPPSLHRLCS--QTKLLLNCVGPYRLH------------------------GDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 77 ------~d~~sl~~~~~--~~dvVIn~aGp~~~~------------------------~~~vv~Ac~~~g~~yvdisge~ 124 (420)
.-.+.+.+++. ++|+|+++..-+... |..+.+++.++|++.+-+-.|.
T Consensus 72 ~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PVDSEh 151 (385)
T PRK05447 72 AGIEVLAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILPVDSEH 151 (385)
T ss_pred CCceEEEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEECHHH
Confidence 12455666665 468998877643211 2444555556666666665555
Q ss_pred HHHHHHHH
Q 014694 125 EFMERMEA 132 (420)
Q Consensus 125 ~~~~~~~~ 132 (420)
.-+.+.++
T Consensus 152 ~ai~q~l~ 159 (385)
T PRK05447 152 SAIFQCLP 159 (385)
T ss_pred HHHHHHhc
Confidence 55555554
No 431
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.55 E-value=0.032 Score=55.03 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=52.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCcc-EEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIP-ILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~~-~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|| |.+|..++..++..+- .++.+.++++++++....++... ...... .+.. ..| . +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~------~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~ 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL------GDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TND---Y-EDIAG 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC------eEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCC---H-HHHCC
Confidence 58999999 9999999999988761 28999999988776544333210 001111 1221 123 2 34789
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||.++|.....+
T Consensus 71 aDiVii~~~~p~~~~ 85 (307)
T PRK06223 71 SDVVVITAGVPRKPG 85 (307)
T ss_pred CCEEEECCCCCCCcC
Confidence 999999998654443
No 432
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.54 E-value=0.052 Score=58.97 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=67.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
+.+|+|.|. |-+|+.+++.|.+++ .++.+.++|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSG-------VKMTVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAK 464 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------cCCeEEEEeCCCHHHHHhcCCCc
Confidence 357888886 889999999999887 789999999999877644 2468899999999988875 678
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSG 114 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g 114 (420)
+|.||-+..-. .....++..+++..
T Consensus 465 A~~vvv~~~d~-~~n~~i~~~ar~~~ 489 (621)
T PRK03562 465 AEVLINAIDDP-QTSLQLVELVKEHF 489 (621)
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHhC
Confidence 99998887421 12244455555543
No 433
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.54 E-value=0.093 Score=43.69 Aligned_cols=101 Identities=22% Similarity=0.289 Sum_probs=71.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
++|.|+|+ |.+|+...+.+.+..+ ..++ .+.++++++.++..+..+ +. . .+| ++++++
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~-----~~~v~~v~d~~~~~~~~~~~~~~------~~-~---~~~---~~~ll~~~ 61 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSP-----DFEVVAVCDPDPERAEAFAEKYG------IP-V---YTD---LEELLADE 61 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHTT------SE-E---ESS---HHHHHHHT
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CcEEEEEEeCCHHHHHHHHHHhc------cc-c---hhH---HHHHHHhh
Confidence 47899998 8889999999888753 1454 688999999888877664 23 1 223 666666
Q ss_pred ccCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
+.|+|+-+..+.. ...++..|.+.|.| +++ ++-...=.+++++
T Consensus 62 ~~D~V~I~tp~~~--h~~~~~~~l~~g~~v~~EKP~~~~~~~~~~l~~ 107 (120)
T PF01408_consen 62 DVDAVIIATPPSS--HAEIAKKALEAGKHVLVEKPLALTLEEAEELVE 107 (120)
T ss_dssp TESEEEEESSGGG--HHHHHHHHHHTTSEEEEESSSSSSHHHHHHHHH
T ss_pred cCCEEEEecCCcc--hHHHHHHHHHcCCEEEEEcCCcCCHHHHHHHHH
Confidence 6899988776533 36888999999997 555 4445555555554
No 434
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.53 E-value=0.045 Score=49.36 Aligned_cols=74 Identities=19% Similarity=0.263 Sum_probs=51.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
...+|+|+|+++.+|..++++|.+++ .++.++.|+. +++.+.+++
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g-------~~V~v~~r~~----------------------------~~l~~~l~~ 87 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRN-------ATVTVCHSKT----------------------------KNLKEHTKQ 87 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCC-------CEEEEEECCc----------------------------hhHHHHHhh
Confidence 44689999997778999999999987 6788888863 234567778
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
+|+||++++--+..... -.+.+.-.||++
T Consensus 88 aDiVIsat~~~~ii~~~----~~~~~~viIDla 116 (168)
T cd01080 88 ADIVIVAVGKPGLVKGD----MVKPGAVVIDVG 116 (168)
T ss_pred CCEEEEcCCCCceecHH----HccCCeEEEEcc
Confidence 99999998853322222 123345567763
No 435
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.50 E-value=0.035 Score=55.14 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=67.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| +|..|+..++.++...+ ..+|.+.+|++++.+++.+++.. ....+..+ +++++.++++|
T Consensus 126 ~~v~iiG-~G~~a~~~~~al~~~~~-----~~~V~V~~Rs~~~a~~~a~~~~~---~g~~~~~~-----~~~~~av~~aD 191 (314)
T PRK06141 126 SRLLVVG-TGRLASLLALAHASVRP-----IKQVRVWGRDPAKAEALAAELRA---QGFDAEVV-----TDLEAAVRQAD 191 (314)
T ss_pred ceEEEEC-CcHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCceEEe-----CCHHHHHhcCC
Confidence 4799998 49999999997776331 16899999999999999887741 12223322 34566778999
Q ss_pred eeEeccCCCCCCcHHHHH-HHHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-Ac~~~g~~yvdisge~~~~~~ 129 (420)
+||+|.... ++++. ...+.|+|..-++...++.++
T Consensus 192 IVi~aT~s~----~pvl~~~~l~~g~~i~~ig~~~~~~~E 227 (314)
T PRK06141 192 IISCATLST----EPLVRGEWLKPGTHLDLVGNFTPDMRE 227 (314)
T ss_pred EEEEeeCCC----CCEecHHHcCCCCEEEeeCCCCccccc
Confidence 998877632 35443 345677754445444555544
No 436
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.43 E-value=0.016 Score=54.79 Aligned_cols=55 Identities=20% Similarity=0.154 Sum_probs=44.4
Q ss_pred HHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh----ccCeeEeccCCC
Q 014694 26 VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----QTKLLLNCVGPY 99 (420)
Q Consensus 26 va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~----~~dvVIn~aGp~ 99 (420)
+++.|++++ .+|++++|+.++++. ..++.+|++|.+++.++++ +.|+|||+||..
T Consensus 1 ~a~~l~~~G-------~~Vv~~~r~~~~~~~------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~ 59 (241)
T PRK12428 1 TARLLRFLG-------ARVIGVDRREPGMTL------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVP 59 (241)
T ss_pred ChHHHHhCC-------CEEEEEeCCcchhhh------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 467888887 799999999876521 2357899999999999987 479999999964
No 437
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=95.41 E-value=0.12 Score=50.66 Aligned_cols=98 Identities=21% Similarity=0.281 Sum_probs=64.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+| .|.+|..+++.|++.+ ++|.+.+|++++.+.+.+ .+ +. . . +++.++++++|
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~-~g------~~--~--~---~~~~e~~~~~d 60 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAG-------YSLVVYDRNPEAVAEVIA-AG------AE--T--A---STAKAVAEQCD 60 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHH-CC------Ce--e--c---CCHHHHHhcCC
Confidence 4799998 5999999999999987 788999999988766543 11 11 1 1 23456678999
Q ss_pred eeEeccCCCCCCcHHHH------HHHHHcCCcEEecCCcHHH-HHHHH
Q 014694 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEPEF-MERME 131 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~Ac~~~g~~yvdisge~~~-~~~~~ 131 (420)
+||-|+-.... -..++ ..+...+..++|.|.-.+- .+++.
T Consensus 61 ~vi~~vp~~~~-~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l~ 107 (296)
T PRK11559 61 VIITMLPNSPH-VKEVALGENGIIEGAKPGTVVIDMSSIAPLASREIA 107 (296)
T ss_pred EEEEeCCCHHH-HHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHHH
Confidence 99988853221 12222 1122456679998766553 34443
No 438
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.40 E-value=0.089 Score=51.78 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=71.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
....|.|.|+.| +|..-+++...-+ ++|.+++++..|.++..+.|+ .+.+..-..|++.+.++.+-
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG-------~rV~vis~~~~kkeea~~~LG------Ad~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMG-------MRVTVISTSSKKKEEAIKSLG------ADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhC-------cEEEEEeCCchhHHHHHHhcC------cceeEEecCCHHHHHHHHHh
Confidence 345799999988 9999999988888 899999999988888888886 34454444589999999998
Q ss_pred cCeeEeccCCCCCC-cHHHHHHHHHcCC
Q 014694 89 TKLLLNCVGPYRLH-GDPVAAACVHSGC 115 (420)
Q Consensus 89 ~dvVIn~aGp~~~~-~~~vv~Ac~~~g~ 115 (420)
.|.++|++--+... -++.++.++.+|+
T Consensus 247 ~dg~~~~v~~~a~~~~~~~~~~lk~~Gt 274 (360)
T KOG0023|consen 247 TDGGIDTVSNLAEHALEPLLGLLKVNGT 274 (360)
T ss_pred hcCcceeeeeccccchHHHHHHhhcCCE
Confidence 89888888643222 2666777766665
No 439
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.34 E-value=0.074 Score=53.11 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=50.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH---HHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP---SLHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~---sl~~~~ 86 (420)
.-.|+|+||+|.+|...++-+...+ ..++++..+.+|.+ .+.+++. . ...|..+++ .+.++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G-------~~~v~~~~s~~k~~-~~~~lGA------d-~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALG-------ATVVAVVSSSEKLE-LLKELGA------D-HVINYREEDFVEQVRELT 207 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcC-------CcEEEEecCHHHHH-HHHhcCC------C-EEEcCCcccHHHHHHHHc
Confidence 3479999999999999998877776 45666666677776 6666651 1 223344432 333344
Q ss_pred h--ccCeeEeccCC
Q 014694 87 S--QTKLLLNCVGP 98 (420)
Q Consensus 87 ~--~~dvVIn~aGp 98 (420)
. +.|+|+.++|.
T Consensus 208 ~g~gvDvv~D~vG~ 221 (326)
T COG0604 208 GGKGVDVVLDTVGG 221 (326)
T ss_pred CCCCceEEEECCCH
Confidence 3 58999999985
No 440
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.31 E-value=0.17 Score=53.43 Aligned_cols=101 Identities=8% Similarity=0.074 Sum_probs=65.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHh---CC------C-------CCCCccEEEE
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWA---SP------S-------HSLSIPILTA 74 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l---~~------~-------~~~~~~~i~~ 74 (420)
.+|-++| .|-.|+.+++.|++++ ++|.+.+|+.++.+.+.+.. +. . ...+.++|..
T Consensus 7 ~~IG~IG-LG~MG~~mA~nL~~~G-------~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~ 78 (493)
T PLN02350 7 SRIGLAG-LAVMGQNLALNIAEKG-------FPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVII 78 (493)
T ss_pred CCEEEEe-eHHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEE
Confidence 3688886 6999999999999998 89999999999988776531 10 0 0011344444
Q ss_pred eCCCHHHHHHHHh-------ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 75 DTTDPPSLHRLCS-------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 75 D~~d~~sl~~~~~-------~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
=+.|.+.+++++. .-|+||.+.-........+.+.+.+.|++|+|
T Consensus 79 ~v~~~~aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fld 130 (493)
T PLN02350 79 LVKAGAPVDQTIKALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLG 130 (493)
T ss_pred ECCCcHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 4555554444432 23566666543333446666777777777777
No 441
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.28 E-value=0.14 Score=53.77 Aligned_cols=100 Identities=10% Similarity=0.135 Sum_probs=63.5
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--------CC----C---CCccEEEEeC
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SH----S---LSIPILTADT 76 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--------~~----~---~~~~~i~~D~ 76 (420)
+|-|+|. |-.|..+++.|++++ ++|.+.+|++++.+.+.+.... .. . .+..++..=+
T Consensus 3 ~IgvIGL-G~MG~~lA~nL~~~G-------~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v 74 (470)
T PTZ00142 3 DIGLIGL-AVMGQNLALNIASRG-------FKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLI 74 (470)
T ss_pred EEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEe
Confidence 6888885 999999999999998 7999999999998877653110 00 0 0123233223
Q ss_pred CCHHHHHHHHh-------ccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 77 TDPPSLHRLCS-------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
.+.+.++.++. .-++||.+.--.........+.+.+.|+||+|
T Consensus 75 ~~~~~v~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fld 124 (470)
T PTZ00142 75 KAGEAVDETIDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLG 124 (470)
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEc
Confidence 34333333322 23566666544333346666777788888887
No 442
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.27 E-value=0.14 Score=47.52 Aligned_cols=80 Identities=15% Similarity=0.148 Sum_probs=50.6
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---hhHH---------------HHHHHHhCC-CCCCCc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRV---------------KQALQWASP-SHSLSI 69 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---~~kl---------------~~~~~~l~~-~~~~~~ 69 (420)
+..+|+|.|+ |.+|..++++|++.|- -+|.+.+++ .+.+ +.+.+.+.. ....++
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i 92 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGI------GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEI 92 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEE
Confidence 3457999998 7799999999999982 368888876 2222 112222211 011223
Q ss_pred cEEEEeCCCHHHHHHHHhccCeeEecc
Q 014694 70 PILTADTTDPPSLHRLCSQTKLLLNCV 96 (420)
Q Consensus 70 ~~i~~D~~d~~sl~~~~~~~dvVIn~a 96 (420)
..+..++ +.+.+.++++++|+||.|.
T Consensus 93 ~~~~~~i-~~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 93 EAYDEKI-TEENIDKFFKDADIVCEAF 118 (200)
T ss_pred EEeeeeC-CHhHHHHHhcCCCEEEECC
Confidence 3344455 3467788888999999884
No 443
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.25 E-value=0.17 Score=49.45 Aligned_cols=92 Identities=17% Similarity=0.211 Sum_probs=58.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d-~~sl~~~~~~~ 89 (420)
-.++|+||+|.+|+.+++.+...+ .++.++.|+.++.+.+ .+++ ... ..|..+ .+.+.+. .+.
T Consensus 164 ~~vlI~ga~g~vG~~~~~~a~~~g-------~~v~~~~~~~~~~~~~-~~~~------~~~-~~~~~~~~~~~~~~-~~~ 227 (332)
T cd08259 164 DTVLVTGAGGGVGIHAIQLAKALG-------ARVIAVTRSPEKLKIL-KELG------ADY-VIDGSKFSEDVKKL-GGA 227 (332)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHH-HHcC------CcE-EEecHHHHHHHHhc-cCC
Confidence 479999999999999999998887 7888888988877554 4332 111 123222 1222222 268
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+||+++|... ....-.|...+-+++.++
T Consensus 228 d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g 256 (332)
T cd08259 228 DVVIELVGSPT---IEESLRSLNKGGRLVLIG 256 (332)
T ss_pred CEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence 99999998532 222223334445677664
No 444
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.21 E-value=0.25 Score=42.47 Aligned_cols=45 Identities=20% Similarity=0.210 Sum_probs=35.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE--EEEecChhHHHHHHHHhC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSL--ALAGRNPTRVKQALQWAS 62 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v--~iagRs~~kl~~~~~~l~ 62 (420)
|+|+|+||-||+...+-+.++.+ . ++| ..+++|.+++.+...++.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d-~----f~v~~Lsa~~n~~~L~~q~~~f~ 47 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD-K----FEVVALSAGSNIEKLAEQAREFK 47 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT-T----EEEEEEEESSTHHHHHHHHHHHT
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC-c----eEEEEEEcCCCHHHHHHHHHHhC
Confidence 68999999999999988877642 2 565 345688889988888774
No 445
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.20 E-value=0.12 Score=51.18 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=53.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
|+|.|+|+ |.+|..++..|+..+. ..++.+.++++++++....++.. ....... +.. .|. +.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-----~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~--~d~----~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-----ASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA--GDY----ADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-----CCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee--CCH----HHhCC
Confidence 57999998 9999999999998762 14799999999887644444431 0011111 111 232 34789
Q ss_pred cCeeEeccCCCCCC
Q 014694 89 TKLLLNCVGPYRLH 102 (420)
Q Consensus 89 ~dvVIn~aGp~~~~ 102 (420)
+|+||.++|.....
T Consensus 68 aDiViita~~~~~~ 81 (308)
T cd05292 68 ADVVVITAGANQKP 81 (308)
T ss_pred CCEEEEccCCCCCC
Confidence 99999999965443
No 446
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.20 E-value=0.13 Score=48.83 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=49.8
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcce-EEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~-v~iagR-s~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~ 86 (420)
..++|.|+|+ |.+|..++..|++++... .+ +.+..| +.++++.+.++.+ +. .. .| .++++
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~------~~--~~--~~---~~~~~ 64 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEY----IEEIIVSNRSNVEKLDQLQARYN------VS--TT--TD---WKQHV 64 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCC----cCeEEEECCCCHHHHHHHHHHcC------cE--Ee--CC---hHHHH
Confidence 3578999985 999999999998875211 33 667777 4677766665432 21 11 22 34566
Q ss_pred hccCeeEeccCCCC
Q 014694 87 SQTKLLLNCVGPYR 100 (420)
Q Consensus 87 ~~~dvVIn~aGp~~ 100 (420)
+++|+||.|+-|..
T Consensus 65 ~~~DiViiavp~~~ 78 (245)
T PRK07634 65 TSVDTIVLAMPPSA 78 (245)
T ss_pred hcCCEEEEecCHHH
Confidence 78999999987643
No 447
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.19 E-value=0.079 Score=52.58 Aligned_cols=81 Identities=15% Similarity=0.036 Sum_probs=51.4
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|.|+||+|.+|..++-.|+..+- ..++++.++++ .+....++.. ......+.... +.+++.+.++++|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-----~~elvL~Di~~--a~g~a~DL~~-~~~~~~i~~~~--~~~~~~~~~~daDi 70 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-----VSELSLYDIAG--AAGVAADLSH-IPTAASVKGFS--GEEGLENALKGADV 70 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-----CcEEEEecCCC--CcEEEchhhc-CCcCceEEEec--CCCchHHHcCCCCE
Confidence 589999999999999998887752 14789999876 2222222321 01111222111 12335678999999
Q ss_pred eEeccCCCCCC
Q 014694 92 LLNCVGPYRLH 102 (420)
Q Consensus 92 VIn~aGp~~~~ 102 (420)
||.++|.-...
T Consensus 71 vvitaG~~~~~ 81 (312)
T TIGR01772 71 VVIPAGVPRKP 81 (312)
T ss_pred EEEeCCCCCCC
Confidence 99999975443
No 448
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.18 E-value=0.088 Score=48.79 Aligned_cols=93 Identities=14% Similarity=0.108 Sum_probs=60.0
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+.++|+|.|. |.+|+.++++|.+.+ .+|.+.+++.++++++.+.++ .. .+|. +++.. .+
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G-------~~Vvv~D~~~~~~~~~~~~~g------~~--~v~~---~~l~~--~~ 85 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEG-------AKLIVADINEEAVARAAELFG------AT--VVAP---EEIYS--VD 85 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHcC------CE--EEcc---hhhcc--cc
Confidence 3467999997 789999999999988 789999999998877766542 11 2222 21211 27
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~ 126 (420)
+|+++.|+.-.... .. .+.+-++++|--.+..++
T Consensus 86 ~Dv~vp~A~~~~I~-~~---~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 86 ADVFAPCALGGVIN-DD---TIPQLKAKAIAGAANNQL 119 (200)
T ss_pred CCEEEecccccccC-HH---HHHHcCCCEEEECCcCcc
Confidence 99999887543222 22 223445665554444433
No 449
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.17 E-value=0.11 Score=53.85 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=62.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-cc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-~~ 89 (420)
.+|+|+|+++ +|..+++.|++.| .+|.+.+++........+++. ...+.+...+ ++..+ .. .+
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G-------~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~--~~~~~---~~~~~ 69 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLG-------ANVTVNDGKPFSENPEAQELL---EEGIKVICGS--HPLEL---LDEDF 69 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCC-------CEEEEEcCCCccchhHHHHHH---hcCCEEEeCC--CCHHH---hcCcC
Confidence 3699999987 9999999999998 789999886543322333332 1133333222 22222 23 48
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~ 129 (420)
|+||+..|... ..++++++.+.|+..+ ++.++...
T Consensus 70 d~vV~s~gi~~--~~~~~~~a~~~~i~v~---~~~el~~~ 104 (447)
T PRK02472 70 DLMVKNPGIPY--TNPMVEKALEKGIPII---TEVELAYL 104 (447)
T ss_pred CEEEECCCCCC--CCHHHHHHHHCCCcEE---eHHHHHHH
Confidence 99999998543 3588888888887544 44444333
No 450
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.14 E-value=0.18 Score=50.21 Aligned_cols=82 Identities=13% Similarity=0.035 Sum_probs=52.7
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHRLC 86 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~-~i~~D~~d~~sl~~~~ 86 (420)
+.++|.|+|| |.+|..++..++..+- .++.+.++++++++...-++.. ....... .+.+ ..| .+ .+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~------~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL------GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DI 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-Hh
Confidence 4568999997 9999999988877651 4799999998776543332321 0011111 2222 123 34 56
Q ss_pred hccCeeEeccCCCCCC
Q 014694 87 SQTKLLLNCVGPYRLH 102 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~ 102 (420)
+++|+||.++|.....
T Consensus 72 ~~ADiVVitag~~~~~ 87 (319)
T PTZ00117 72 KDSDVVVITAGVQRKE 87 (319)
T ss_pred CCCCEEEECCCCCCCC
Confidence 8999999999865443
No 451
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=95.10 E-value=0.1 Score=51.72 Aligned_cols=94 Identities=16% Similarity=0.050 Sum_probs=58.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s----l~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ .++++..++.++.+.+.+.++. .. ..|..+.++ +.+..
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G-------~~Vi~~~~~~~~~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~~ 218 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKG-------CYVVGSAGSDEKVDLLKNKLGF------DD-AFNYKEEPDLDAALKRYF 218 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHhcCC------ce-eEEcCCcccHHHHHHHhC
Confidence 479999999999999998777776 6888889999888666554641 11 233322222 22222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++|+||+++|. ......++ |...+-+++.+.
T Consensus 219 ~~gvd~v~d~~g~--~~~~~~~~-~l~~~G~iv~~G 251 (338)
T cd08295 219 PNGIDIYFDNVGG--KMLDAVLL-NMNLHGRIAACG 251 (338)
T ss_pred CCCcEEEEECCCH--HHHHHHHH-HhccCcEEEEec
Confidence 258999999984 11123333 334444566553
No 452
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=95.09 E-value=0.13 Score=48.32 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=58.5
Q ss_pred ceEEEEcCC--cHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh-
Q 014694 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (420)
Q Consensus 11 ~~IvV~GAT--G~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~- 87 (420)
.+++|.|-. --|+-.|++.|.++| .+++....++ ++++-++++.. .....-++.||++|.+++++++.
T Consensus 7 K~~lI~Gvan~rSIAwGIAk~l~~~G-------AeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~d~~i~~~f~~ 77 (259)
T COG0623 7 KRILIMGVANNRSIAWGIAKALAEQG-------AELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTNDESIDALFAT 77 (259)
T ss_pred ceEEEEEecccccHHHHHHHHHHHcC-------CEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCCHHHHHHHHHH
Confidence 478898854 348999999999998 6788777665 54444444431 11124579999999999999987
Q ss_pred ------ccCeeEeccCCC
Q 014694 88 ------QTKLLLNCVGPY 99 (420)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (420)
..|.|+|+.|..
T Consensus 78 i~~~~g~lD~lVHsIaFa 95 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFA 95 (259)
T ss_pred HHHhhCcccEEEEEeccC
Confidence 469999999853
No 453
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.07 E-value=0.17 Score=49.40 Aligned_cols=99 Identities=18% Similarity=0.260 Sum_probs=62.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCe
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dv 91 (420)
+|-++| .|-.|..++.+|.+.+ +.+.+.+|+++|..+.+...+. .-.++..++++++|+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG-------~~v~v~~r~~~ka~~~~~~~Ga-------------~~a~s~~eaa~~aDv 60 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAG-------HEVTVYNRTPEKAAELLAAAGA-------------TVAASPAEAAAEADV 60 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCC-------CEEEEEeCChhhhhHHHHHcCC-------------cccCCHHHHHHhCCE
Confidence 566776 6999999999999998 8999999999995455443321 112334677788888
Q ss_pred eEeccCCCCCCcHHHHH---HH---HHcCCcEEecCC-cHHHHHHHHH
Q 014694 92 LLNCVGPYRLHGDPVAA---AC---VHSGCDYLDISG-EPEFMERMEA 132 (420)
Q Consensus 92 VIn~aGp~~~~~~~vv~---Ac---~~~g~~yvdisg-e~~~~~~~~~ 132 (420)
||.|+.....- +.|+. -. ...|..+||.|. .+...+++..
T Consensus 61 Vitmv~~~~~V-~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~ 107 (286)
T COG2084 61 VITMLPDDAAV-RAVLFGENGLLEGLKPGAIVIDMSTISPETARELAA 107 (286)
T ss_pred EEEecCCHHHH-HHHHhCccchhhcCCCCCEEEECCCCCHHHHHHHHH
Confidence 88887532110 11111 01 123666888764 4444455444
No 454
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=94.99 E-value=0.11 Score=55.41 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=72.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHH---HH---HHHhCCCCCCCccEEEEeCCCHHHH
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QA---LQWASPSHSLSIPILTADTTDPPSL 82 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~---~~---~~~l~~~~~~~~~~i~~D~~d~~sl 82 (420)
|.-+|+|+|. |.+|..++..|++.|..+ ++.+..++-.+.+. ++ .+++ .+++.+...|....+++
T Consensus 128 R~akVlVlG~-Gg~~s~lv~sL~~sG~~~----I~~vd~D~v~SNlnRIgEl~e~A~~~----n~~v~v~~i~~~~~~dl 198 (637)
T TIGR03693 128 RNAKILAAGS-GDFLTKLVRSLIDSGFPR----FHAIVTDAEEHALDRIHELAEIAEET----DDALLVQEIDFAEDQHL 198 (637)
T ss_pred hcccEEEEec-CchHHHHHHHHHhcCCCc----EEEEeccccchhhhHHHHHHHHHHHh----CCCCceEeccCCcchhH
Confidence 6678999986 668999999999998522 44454555444332 32 3332 35677777777788999
Q ss_pred HHHHhccCeeEeccCCCCCC-cHHHHHHHHHcCCcEE
Q 014694 83 HRLCSQTKLLLNCVGPYRLH-GDPVAAACVHSGCDYL 118 (420)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-~~~vv~Ac~~~g~~yv 118 (420)
.+.++..|+||+.+.-+... -..+-++|++.|..++
T Consensus 199 ~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 199 HEAFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred HHhhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999999855433 3667789999996543
No 455
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=94.97 E-value=0.1 Score=52.25 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=50.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHH----HHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSL----HRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl----~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ .+|+++.++.++++.+.++++ ... ..|..+.+++ .+..
T Consensus 160 ~~VlV~GaaG~vG~~aiqlAk~~G-------~~Vi~~~~~~~k~~~~~~~lG------a~~-vi~~~~~~~~~~~i~~~~ 225 (348)
T PLN03154 160 DSVFVSAASGAVGQLVGQLAKLHG-------CYVVGSAGSSQKVDLLKNKLG------FDE-AFNYKEEPDLDAALKRYF 225 (348)
T ss_pred CEEEEecCccHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHhcC------CCE-EEECCCcccHHHHHHHHC
Confidence 469999999999999988877766 688888899888866655564 121 2343322222 2222
Q ss_pred -hccCeeEeccCC
Q 014694 87 -SQTKLLLNCVGP 98 (420)
Q Consensus 87 -~~~dvVIn~aGp 98 (420)
.+.|+||.|+|.
T Consensus 226 ~~gvD~v~d~vG~ 238 (348)
T PLN03154 226 PEGIDIYFDNVGG 238 (348)
T ss_pred CCCcEEEEECCCH
Confidence 258999999984
No 456
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=94.97 E-value=0.19 Score=49.47 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=57.8
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecC---------------------hhHHHHHHHHhCCCCCCCcc
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---------------------PTRVKQALQWASPSHSLSIP 70 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs---------------------~~kl~~~~~~l~~~~~~~~~ 70 (420)
+|+|+|+ |.+|..++++|+..|- -++.+++.+ ..|.+.+.+.+.. ..+.++
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGV------g~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~-iNP~v~ 72 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGV------RHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKE-IFPSID 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHH-HCCCcE
Confidence 5899988 6799999999999873 345554422 1133333333321 012233
Q ss_pred E--EEEeC----------------CCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 71 I--LTADT----------------TDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 71 ~--i~~D~----------------~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+ +...+ .|.+.+.++++++|+||.|...+.. .--+-.+|.+.+..+|+
T Consensus 73 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn~es-R~L~~~~~~~~~k~~I~ 138 (307)
T cd01486 73 ATGIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDSRES-RWLPTLLSAAKNKLVIN 138 (307)
T ss_pred EEEeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECCCCHHH-HHHHHHHHHHhCCcEEE
Confidence 2 22221 3567788899999999988864322 12334566666665554
No 457
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=94.92 E-value=0.24 Score=48.37 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccCeeEeccC
Q 014694 18 ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVG 97 (420)
Q Consensus 18 ATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~dvVIn~aG 97 (420)
|.|.+|..+++.|++.+ ++|.+.+|+.++.+.+.+ .+ +. .. ++..++++++|+||-|+.
T Consensus 3 GlG~mG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~-~g------~~--~~-----~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAG-------HPVRVFDLFPDAVEEAVA-AG------AQ--AA-----ASPAEAAEGADRVITMLP 61 (288)
T ss_pred cccHhHHHHHHHHHhCC-------CeEEEEeCCHHHHHHHHH-cC------Ce--ec-----CCHHHHHhcCCEEEEeCC
Confidence 46999999999999987 789999999998876654 11 11 11 124456677777777775
Q ss_pred C
Q 014694 98 P 98 (420)
Q Consensus 98 p 98 (420)
+
T Consensus 62 ~ 62 (288)
T TIGR01692 62 A 62 (288)
T ss_pred C
Confidence 4
No 458
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.92 E-value=0.14 Score=50.73 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=60.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcc-eEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~-~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~---~sl~~~~ 86 (420)
-.|+|+||+|.+|..+++.+...+ . +|+++.+++++.+.+.++++. .. ..|..+. +.+.++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G-------~~~Vi~~~~s~~~~~~~~~~lGa------~~-vi~~~~~~~~~~i~~~~ 221 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLG-------CSRVVGICGSDEKCQLLKSELGF------DA-AINYKTDNVAERLRELC 221 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CCEEEEEcCCHHHHHHHHHhcCC------cE-EEECCCCCHHHHHHHHC
Confidence 479999999999999988766666 5 788888999988776665641 21 2333332 2233222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.++|+||+++|... ....+ .|.+.+-+++.+.
T Consensus 222 ~~gvd~vid~~g~~~--~~~~~-~~l~~~G~iv~~G 254 (345)
T cd08293 222 PEGVDVYFDNVGGEI--SDTVI-SQMNENSHIILCG 254 (345)
T ss_pred CCCceEEEECCCcHH--HHHHH-HHhccCCEEEEEe
Confidence 25899999998422 12333 3445555666653
No 459
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=94.91 E-value=0.075 Score=53.03 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=71.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.++.|+| +|..|+.-++.+....+ ..+|.+.+|+.++.+.+.+++.. ..+.+..+ ++.+++++++|
T Consensus 129 ~~lgiiG-~G~qA~~~l~al~~~~~-----~~~v~V~~r~~~~~~~~~~~~~~---~g~~v~~~-----~~~~eav~~aD 194 (325)
T TIGR02371 129 SVLGIIG-AGRQAWTQLEALSRVFD-----LEEVSVYCRTPSTREKFALRASD---YEVPVRAA-----TDPREAVEGCD 194 (325)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---hCCcEEEe-----CCHHHHhccCC
Confidence 4688886 59999998888776432 26899999999999888877641 12333333 24567788999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+||.|... .+++++. ..+.|+|.+-+....+..++
T Consensus 195 iVitaT~s----~~P~~~~~~l~~g~~v~~vGs~~p~~~E 230 (325)
T TIGR02371 195 ILVTTTPS----RKPVVKADWVSEGTHINAIGADAPGKQE 230 (325)
T ss_pred EEEEecCC----CCcEecHHHcCCCCEEEecCCCCccccc
Confidence 99987732 3466543 57889998888776666554
No 460
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=94.91 E-value=0.19 Score=50.58 Aligned_cols=91 Identities=14% Similarity=0.239 Sum_probs=59.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
.+.+|.|+|+ || |+.-++.+.+..+ + .--+++++|+.++.+++.++.+ +.. . .++++++.+
T Consensus 2 ~~~rVgViG~-~~-G~~h~~al~~~~~-~---~eLvaV~d~~~erA~~~A~~~g------i~~----y---~~~eell~d 62 (343)
T TIGR01761 2 DVQSVVVCGT-RF-GQFYLAAFAAAPE-R---FELAGILAQGSERSRALAHRLG------VPL----Y---CEVEELPDD 62 (343)
T ss_pred CCcEEEEEeH-HH-HHHHHHHHHhCCC-C---cEEEEEEcCCHHHHHHHHHHhC------CCc----c---CCHHHHhcC
Confidence 4578999998 76 8887777766431 1 0236788999999988888764 221 2 335566676
Q ss_pred cCeeEeccCC--CCCCcHHHHHHHHHcCCcEE
Q 014694 89 TKLLLNCVGP--YRLHGDPVAAACVHSGCDYL 118 (420)
Q Consensus 89 ~dvVIn~aGp--~~~~~~~vv~Ac~~~g~~yv 118 (420)
.|+++-++.. .......++.+|.++|.|.+
T Consensus 63 ~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL 94 (343)
T TIGR01761 63 IDIACVVVRSAIVGGQGSALARALLARGIHVL 94 (343)
T ss_pred CCEEEEEeCCCCCCccHHHHHHHHHhCCCeEE
Confidence 7765444321 12334788888999998843
No 461
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=94.90 E-value=0.25 Score=52.26 Aligned_cols=98 Identities=14% Similarity=0.179 Sum_probs=62.1
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---------- 78 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d---------- 78 (420)
.+-+|+|+|+ |-+|...+..+...| .+|.+.+++.++++. .++++ .+++..|..+
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lG-------A~V~a~D~~~~rle~-aeslG------A~~v~i~~~e~~~~~~gya~ 228 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLG-------AIVRAFDTRPEVAEQ-VESMG------AEFLELDFEEEGGSGDGYAK 228 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHH-HHHcC------CeEEEeccccccccccchhh
Confidence 3568999997 999999999988877 679999999999864 44464 2333333211
Q ss_pred ----H--HH----HHHHHhccCeeEeccCCCCC-Cc----HHHHHHHHHcCCcEEecCC
Q 014694 79 ----P--PS----LHRLCSQTKLLLNCVGPYRL-HG----DPVAAACVHSGCDYLDISG 122 (420)
Q Consensus 79 ----~--~s----l~~~~~~~dvVIn~aGp~~~-~~----~~vv~Ac~~~g~~yvdisg 122 (420)
. +. +.+.++++|+||+|+|.... .. +..++.+ +.|...+|++-
T Consensus 229 ~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~m-kpGgvIVdvg~ 286 (509)
T PRK09424 229 VMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASM-KPGSVIVDLAA 286 (509)
T ss_pred hcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhc-CCCCEEEEEcc
Confidence 1 11 12223579999999985321 11 2333333 34556788763
No 462
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=94.88 E-value=0.18 Score=53.23 Aligned_cols=98 Identities=17% Similarity=0.255 Sum_probs=64.9
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC------------
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT------------ 77 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~------------ 77 (420)
+-+++|+|+ |-+|...+..+...+ ..|.+.+++.++++.. ++++ .+++..|..
T Consensus 164 ~akVlViGa-G~iGl~Aa~~ak~lG-------A~V~v~d~~~~rle~a-~~lG------a~~v~v~~~e~g~~~~gYa~~ 228 (511)
T TIGR00561 164 PAKVLVIGA-GVAGLAAIGAANSLG-------AIVRAFDTRPEVKEQV-QSMG------AEFLELDFKEEGGSGDGYAKV 228 (511)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcC------CeEEeccccccccccccceee
Confidence 458999997 999999999988887 5799999999887544 4454 233333321
Q ss_pred --CHHH------HHHHHhccCeeEecc---CC-C-CCCcHHHHHHHHHcCCcEEecCCc
Q 014694 78 --DPPS------LHRLCSQTKLLLNCV---GP-Y-RLHGDPVAAACVHSGCDYLDISGE 123 (420)
Q Consensus 78 --d~~s------l~~~~~~~dvVIn~a---Gp-~-~~~~~~vv~Ac~~~g~~yvdisge 123 (420)
++.. +.+.++++|+||+|+ |- . ....+..++. .+.|...||++-+
T Consensus 229 ~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~-MKpGsvIVDlA~d 286 (511)
T TIGR00561 229 MSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDS-MKAGSVIVDLAAE 286 (511)
T ss_pred cCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhh-CCCCCEEEEeeeC
Confidence 1111 455667899999999 41 1 1223444444 3556778888743
No 463
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.85 E-value=0.048 Score=53.88 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=34.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~ 58 (420)
++|.|+| +|.+|..++..|++++ ++|.+.+|++++++...
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G-------~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG-------HEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC-------CeeEEEeCCHHHHHHHH
Confidence 3799999 6999999999999988 79999999988776543
No 464
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=94.81 E-value=0.12 Score=51.00 Aligned_cols=82 Identities=21% Similarity=0.137 Sum_probs=55.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCc-cEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSI-PILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~-~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|| |++|+.++-.|+.... ...+.+.++++++.+-...++.. ...... ..+..| .| -+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~-----~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~ 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL-----GSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKG 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc-----cceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcC
Confidence 47999999 9999999999966652 13899999997777655555532 000111 122222 22 456789
Q ss_pred cCeeEeccCCCCCCc
Q 014694 89 TKLLLNCVGPYRLHG 103 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~ 103 (420)
+|+||-+||.-+..|
T Consensus 70 aDiVvitAG~prKpG 84 (313)
T COG0039 70 ADIVVITAGVPRKPG 84 (313)
T ss_pred CCEEEEeCCCCCCCC
Confidence 999999999766554
No 465
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=94.68 E-value=0.14 Score=49.66 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=55.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|++|.+|+.+++.+.++.. +++ .+.+|+. ++..+-..++. ......+.. ..|.+.+ ...
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~------~elvav~d~~~~~~~~~~~~~~~--~~~~~gv~~--~~d~~~l---~~~ 68 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEG------LQLVAAFERHGSSLQGTDAGELA--GIGKVGVPV--TDDLEAV---ETD 68 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCccccCCCHHHhc--CcCcCCcee--eCCHHHh---cCC
Confidence 5899999999999999999887631 454 4456442 22111111111 000111111 1243433 356
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEe
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLD 119 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvd 119 (420)
+|+||-+..|.. ...+++.|.++|+|.|-
T Consensus 69 ~DvVIdfT~p~~--~~~~~~~al~~g~~vVi 97 (266)
T TIGR00036 69 PDVLIDFTTPEG--VLNHLKFALEHGVRLVV 97 (266)
T ss_pred CCEEEECCChHH--HHHHHHHHHHCCCCEEE
Confidence 899988886633 36788888999988765
No 466
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=94.67 E-value=0.21 Score=52.38 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=35.3
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQW 60 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~ 60 (420)
+|-|+| .|-.|..+++.|++++ ++|.+.+|++++.+.+.+.
T Consensus 1 ~IG~IG-LG~MG~~mA~nL~~~G-------~~V~v~drt~~~~~~l~~~ 41 (467)
T TIGR00873 1 DIGVIG-LAVMGSNLALNMADHG-------FTVSVYNRTPEKTDEFLAE 41 (467)
T ss_pred CEEEEe-eHHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHhh
Confidence 366776 5999999999999998 7999999999999887764
No 467
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.67 E-value=0.14 Score=49.16 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=50.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| +|.+|+.+++.|.+.+.. ...+.+.+|+.++.+++.+... .+. .+ .+ ..++++++|
T Consensus 1 m~IgiIG-~G~mG~aia~~L~~~g~~----~~~i~v~~r~~~~~~~l~~~~~-----~~~--~~--~~---~~~~~~~aD 63 (258)
T PRK06476 1 MKIGFIG-TGAITEAMVTGLLTSPAD----VSEIIVSPRNAQIAARLAERFP-----KVR--IA--KD---NQAVVDRSD 63 (258)
T ss_pred CeEEEEC-cCHHHHHHHHHHHhCCCC----hheEEEECCCHHHHHHHHHHcC-----Cce--Ee--CC---HHHHHHhCC
Confidence 3688998 699999999999987621 1356788999999877766431 111 11 23 344567899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-|+.|.
T Consensus 64 vVilav~p~ 72 (258)
T PRK06476 64 VVFLAVRPQ 72 (258)
T ss_pred EEEEEeCHH
Confidence 999999763
No 468
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.67 E-value=0.19 Score=48.39 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=50.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.|+|+ |.+|..+++.|.+.+.. ..++.+.+|+.++.+++.+.++ +.+ . .+ ..+.+.++|
T Consensus 3 m~I~iIG~-G~mG~~la~~l~~~g~~----~~~v~v~~r~~~~~~~~~~~~g------~~~--~--~~---~~~~~~~ad 64 (267)
T PRK11880 3 KKIGFIGG-GNMASAIIGGLLASGVP----AKDIIVSDPSPEKRAALAEEYG------VRA--A--TD---NQEAAQEAD 64 (267)
T ss_pred CEEEEEec-hHHHHHHHHHHHhCCCC----cceEEEEcCCHHHHHHHHHhcC------Cee--c--CC---hHHHHhcCC
Confidence 57999986 99999999999887521 1578899999988877665432 111 1 12 334467899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||-|+-|+
T Consensus 65 vVil~v~~~ 73 (267)
T PRK11880 65 VVVLAVKPQ 73 (267)
T ss_pred EEEEEcCHH
Confidence 999888654
No 469
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.63 E-value=0.17 Score=50.12 Aligned_cols=77 Identities=22% Similarity=0.274 Sum_probs=54.2
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CC-C--CCccEEEEeCCCHHHHHHHHh
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SH-S--LSIPILTADTTDPPSLHRLCS 87 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~-~--~~~~~i~~D~~d~~sl~~~~~ 87 (420)
+|.|+|| |.+|..++..|+..+-. -++.+.+.++++++....+|.. .. . .++.+. . .| -+.++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~----y~~~~ 67 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF-----SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD----YDDCA 67 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC----HHHhC
Confidence 5889998 99999999999886521 3799999998887766666642 00 0 122222 2 23 45688
Q ss_pred ccCeeEeccCCCCC
Q 014694 88 QTKLLLNCVGPYRL 101 (420)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (420)
++|+||-+||....
T Consensus 68 ~aDivvitaG~~~k 81 (307)
T cd05290 68 DADIIVITAGPSID 81 (307)
T ss_pred CCCEEEECCCCCCC
Confidence 99999999996543
No 470
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.60 E-value=0.25 Score=51.83 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=64.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~-~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
..+|+|+|+ |.+|..+++.|.+.+ .+|.+.+++. +....+.+.+. ..++++...+-.+ ....
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~gv~~~~~~~~~------~~~~ 78 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELG-------ARVTVVDDGDDERHRALAAILE---ALGATVRLGPGPT------LPED 78 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCchhhhHHHHHHHH---HcCCEEEECCCcc------ccCC
Confidence 347999997 889999999999887 7899988654 23333333332 1245554432111 2356
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~~~~~~~ 131 (420)
+|+||-+.|.- ...+++..|.+.|+.. -++.++.-.+.
T Consensus 79 ~D~Vv~s~Gi~--~~~~~~~~a~~~gi~v---~~~~e~~~~~~ 116 (480)
T PRK01438 79 TDLVVTSPGWR--PDAPLLAAAADAGIPV---WGEVELAWRLR 116 (480)
T ss_pred CCEEEECCCcC--CCCHHHHHHHHCCCee---cchHHHHHHhh
Confidence 89999887753 3357788888888655 46777654433
No 471
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.58 E-value=0.29 Score=48.75 Aligned_cols=83 Identities=8% Similarity=-0.017 Sum_probs=51.9
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHR 84 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~-~i~~D~~d~~sl~~ 84 (420)
+-+..+|.|+|| |.+|..++..++..+- ..+.+.++++++++...-++.. ....... -+.. ..| . +
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl------~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~-~~d---~-~ 70 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNL------GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG-TNN---Y-E 70 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE-CCC---H-H
Confidence 334568999995 9999999998887661 3799999998865322221111 0011111 1222 133 2 3
Q ss_pred HHhccCeeEeccCCCCC
Q 014694 85 LCSQTKLLLNCVGPYRL 101 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~~~ 101 (420)
.++++|+||+++|....
T Consensus 71 ~l~~aDiVI~tag~~~~ 87 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKR 87 (321)
T ss_pred HhCCCCEEEECCCCCCC
Confidence 56899999999986543
No 472
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.51 E-value=0.14 Score=50.91 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=52.2
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHR 84 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~-~~~~~~~----~i~~D~~d~~sl~~ 84 (420)
.|+|.|+|+ |-+|..++..|++.+ ++|.+.+|++++.+.+.+.... ....... +... +++.+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G-------~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~-----~~~~e 70 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKG-------VPVRLWARRPEFAAALAAERENREYLPGVALPAELYPT-----ADPEE 70 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe-----CCHHH
Confidence 468999986 999999999999987 7899999998887766542110 0000111 1111 23445
Q ss_pred HHhccCeeEeccCCC
Q 014694 85 LCSQTKLLLNCVGPY 99 (420)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (420)
.++++|+||-|+-..
T Consensus 71 ~~~~aD~Vi~~v~~~ 85 (328)
T PRK14618 71 ALAGADFAVVAVPSK 85 (328)
T ss_pred HHcCCCEEEEECchH
Confidence 678899999888654
No 473
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=94.51 E-value=0.13 Score=48.94 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=68.3
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHh--
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~-- 87 (420)
.++|+|+|||+= ++.+++.|...+.. ..-..+++|..+- .++. ...+.+-.-+.+.+.+.++
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~----~~~ss~t~~g~~l----~~~~-------~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVD----IILSSLTGYGAKL----AEQI-------GPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCcc----EEEEEcccccccc----hhcc-------CCeeecCcCCHHHHHHHHHHc
Confidence 367999999984 89999999887510 0111223343222 2221 2356667778899999987
Q ss_pred ccCeeEeccCCCCC-CcHHHHHHHHHcCCcEEec
Q 014694 88 QTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDI 120 (420)
Q Consensus 88 ~~dvVIn~aGp~~~-~~~~vv~Ac~~~g~~yvdi 120 (420)
++|+||.+.-||.. ...|.+++|.+.|+.|+-+
T Consensus 66 ~i~llIDATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 66 GIDLLIDATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 68999999999854 4699999999999999987
No 474
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=94.50 E-value=0.15 Score=46.19 Aligned_cols=66 Identities=21% Similarity=0.123 Sum_probs=46.9
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
+..+|.|+|- |-||+.+++.+..-+ .+|...+|+....... ... .+ . ..++++++++
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG-------~~V~~~d~~~~~~~~~-~~~--------~~-~-----~~~l~ell~~ 91 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFG-------MRVIGYDRSPKPEEGA-DEF--------GV-E-----YVSLDELLAQ 91 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSCHHHHHH-HHT--------TE-E-----ESSHHHHHHH
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCC-------ceeEEecccCChhhhc-ccc--------cc-e-----eeehhhhcch
Confidence 4458999975 999999999999887 8999999988765411 111 11 1 2357889999
Q ss_pred cCeeEeccC
Q 014694 89 TKLLLNCVG 97 (420)
Q Consensus 89 ~dvVIn~aG 97 (420)
+|+|++++-
T Consensus 92 aDiv~~~~p 100 (178)
T PF02826_consen 92 ADIVSLHLP 100 (178)
T ss_dssp -SEEEE-SS
T ss_pred hhhhhhhhc
Confidence 999988774
No 475
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.50 E-value=0.11 Score=51.64 Aligned_cols=101 Identities=15% Similarity=0.250 Sum_probs=73.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
..+.|+| +|..++.-++.++.-.+ .-+|.+.+|+.++.+++.+++.. ..+.+..+ ++.+++++++|
T Consensus 129 ~~l~iiG-~G~qA~~~~~a~~~v~~-----i~~v~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~AD 194 (315)
T PRK06823 129 SAIGIVG-TGIQARMQLMYLKNVTD-----CRQLWVWGRSETALEEYRQYAQA---LGFAVNTT-----LDAAEVAHAAN 194 (315)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEE-----CCHHHHhcCCC
Confidence 4688887 59999999998887542 26899999999999988877641 23444444 34688889999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|+.|..- .++++++ ..+.|+|..-+....+..++
T Consensus 195 IV~taT~s----~~P~~~~~~l~~G~hi~~iGs~~p~~~E 230 (315)
T PRK06823 195 LIVTTTPS----REPLLQAEDIQPGTHITAVGADSPGKQE 230 (315)
T ss_pred EEEEecCC----CCceeCHHHcCCCcEEEecCCCCccccc
Confidence 99977642 2466643 55788998888766666554
No 476
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=94.47 E-value=0.3 Score=46.74 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=54.8
Q ss_pred CCcceEEEEcCCcHHHHHHHHHHHHhCCC----CCCCcceEEEEecCh------------------hHHHHHHHHhCCCC
Q 014694 8 PELFDVIILGASGFTGKYVVREALKLFNF----PSSPIKSLALAGRNP------------------TRVKQALQWASPSH 65 (420)
Q Consensus 8 ~~~~~IvV~GATG~~G~~va~~L~~~~~~----~~~~~~~v~iagRs~------------------~kl~~~~~~l~~~~ 65 (420)
.++.+|+|+|+ |.+|..+++.|++.+-. +.....++.+++.+. .|.+.+.+.+....
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~Ve~sNLnRQlf~~~dVG~~Ka~v~~~ri~~~~ 87 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDTVSEANVGRQAFYPADVGQNKAIVLVNRLNQAM 87 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCEEccchhhcccCChhHCCcHHHHHHHHHHHhcc
Confidence 46789999998 77999999999986410 000013777777541 23333444443101
Q ss_pred CCCccEEEEeCCCHHHHHHHHhccCeeEeccCCCCCCcHHHHHHHHH
Q 014694 66 SLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (420)
Q Consensus 66 ~~~~~~i~~D~~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~Ac~~ 112 (420)
..+++.+...+.. + ....++|+||+|+--.. ....+.+.|.+
T Consensus 88 ~~~i~a~~~~~~~-~---~~~~~~DiVi~avDn~~-aR~~l~~~~~~ 129 (244)
T TIGR03736 88 GTDWTAHPERVER-S---STLHRPDIVIGCVDNRA-ARLAILRAFEG 129 (244)
T ss_pred CceEEEEEeeeCc-h---hhhcCCCEEEECCCCHH-HHHHHHHHHHH
Confidence 1122333333333 1 22457899998886332 12445677766
No 477
>PRK07680 late competence protein ComER; Validated
Probab=94.46 E-value=0.16 Score=49.27 Aligned_cols=94 Identities=18% Similarity=0.330 Sum_probs=59.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|-+|..+++.|.+.+... ..++.+.+|+.++.+.+.++.. .+. .. .+ ..+++.++|
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~---~~~v~v~~r~~~~~~~~~~~~~-----g~~--~~--~~---~~~~~~~aD 64 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVK---PSQLTITNRTPAKAYHIKERYP-----GIH--VA--KT---IEEVISQSD 64 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCC---cceEEEECCCHHHHHHHHHHcC-----CeE--EE--CC---HHHHHHhCC
Confidence 4689999 5999999999999876100 1368999999988876655331 121 11 12 334567899
Q ss_pred eeEeccCCCCCCcHHHHHHHHH---cCCcEEecCC
Q 014694 91 LLLNCVGPYRLHGDPVAAACVH---SGCDYLDISG 122 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~Ac~~---~g~~yvdisg 122 (420)
+||-|+-|... ..+++.... .+...|++++
T Consensus 65 iVilav~p~~~--~~vl~~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 65 LIFICVKPLDI--YPLLQKLAPHLTDEHCLVSITS 97 (273)
T ss_pred EEEEecCHHHH--HHHHHHHHhhcCCCCEEEEECC
Confidence 99999965432 344444332 2345666665
No 478
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.39 E-value=0.17 Score=49.89 Aligned_cols=93 Identities=13% Similarity=-0.015 Sum_probs=59.0
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH----
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC---- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~---- 86 (420)
-.|+|+||+|.+|..+++.+...+ .++++..++.++.+.+ .+++ .. ...|..+.+.+.+.+
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G-------~~Vi~~~~s~~~~~~~-~~lG------a~-~vi~~~~~~~~~~~~~~~~ 204 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKVAYL-KKLG------FD-VAFNYKTVKSLEETLKKAS 204 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------CC-EEEeccccccHHHHHHHhC
Confidence 479999999999999988776666 6888889998887655 4454 12 123333322232222
Q ss_pred -hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+.|+||+++|... ... .-.|.+.+-+++.+.
T Consensus 205 ~~gvdvv~d~~G~~~--~~~-~~~~l~~~G~iv~~G 237 (325)
T TIGR02825 205 PDGYDCYFDNVGGEF--SNT-VIGQMKKFGRIAICG 237 (325)
T ss_pred CCCeEEEEECCCHHH--HHH-HHHHhCcCcEEEEec
Confidence 25899999998421 122 234455566677653
No 479
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.34 E-value=0.17 Score=49.14 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=48.1
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|.|+| .|.+|..++..|.+.+ ++|.+.+|+++++++..+. + .+. ....+ . +.++++|
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g-------~~V~~~d~~~~~~~~a~~~-g-----~~~---~~~~~---~-~~~~~aD 59 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLG-------HTVYGVSRRESTCERAIER-G-----LVD---EASTD---L-SLLKDCD 59 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHC-C-----Ccc---cccCC---H-hHhcCCC
Confidence 4789998 6999999999999887 7899999999887665432 1 011 11112 1 2467899
Q ss_pred eeEeccCC
Q 014694 91 LLLNCVGP 98 (420)
Q Consensus 91 vVIn~aGp 98 (420)
+||-|+-+
T Consensus 60 lVilavp~ 67 (279)
T PRK07417 60 LVILALPI 67 (279)
T ss_pred EEEEcCCH
Confidence 99998854
No 480
>PRK07589 ornithine cyclodeaminase; Validated
Probab=94.33 E-value=0.14 Score=51.66 Aligned_cols=103 Identities=11% Similarity=0.179 Sum_probs=72.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
-.+.|+|+ |..++.-++.++.-.+ .-+|.+.+|+.++.+++.+++.. ..+++..+ ++++++++++|
T Consensus 130 ~~l~iiGa-G~QA~~~l~a~~~vr~-----i~~V~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~AD 195 (346)
T PRK07589 130 RTMALIGN-GAQSEFQALAFKALLG-----IEEIRLYDIDPAATAKLARNLAG---PGLRIVAC-----RSVAEAVEGAD 195 (346)
T ss_pred cEEEEECC-cHHHHHHHHHHHHhCC-----ceEEEEEeCCHHHHHHHHHHHHh---cCCcEEEe-----CCHHHHHhcCC
Confidence 36888875 9999999988887552 26899999999999999888752 23455444 34788999999
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|+.|.. .. ...++++. ..+.|+|..-+-...+.+++
T Consensus 196 IIvtaT~-S~-~~~Pvl~~~~lkpG~hV~aIGs~~p~~~E 233 (346)
T PRK07589 196 IITTVTA-DK-TNATILTDDMVEPGMHINAVGGDCPGKTE 233 (346)
T ss_pred EEEEecC-CC-CCCceecHHHcCCCcEEEecCCCCCCccc
Confidence 9997773 21 11255543 56788887666555555544
No 481
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.32 E-value=0.15 Score=45.64 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=50.5
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-------------
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD------------- 75 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D------------- 75 (420)
++.+|+|+|+ |-+|+..++-+...+ .++.+.+.+.+++++... .. ...+..+
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lG-------a~v~~~d~~~~~~~~~~~-~~------~~~i~~~~~~~~~~~~~~~~ 83 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLG-------AEVVVPDERPERLRQLES-LG------AYFIEVDYEDHLERKDFDKA 83 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSHHHHHHHHH-TT------TEESEETTTTTTTSB-CCHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCC-------CEEEeccCCHHHHHhhhc-cc------CceEEEcccccccccccchh
Confidence 5578999985 999999999998887 899999999888765533 22 2233332
Q ss_pred ------CCCHHHHHHHHhccCeeEecc
Q 014694 76 ------TTDPPSLHRLCSQTKLLLNCV 96 (420)
Q Consensus 76 ------~~d~~sl~~~~~~~dvVIn~a 96 (420)
..+...+.+.++.+|+||+++
T Consensus 84 ~~~~~~~~~~~~f~~~i~~~d~vI~~~ 110 (168)
T PF01262_consen 84 DYYEHPESYESNFAEFIAPADIVIGNG 110 (168)
T ss_dssp HCHHHCCHHHHHHHHHHHH-SEEEEHH
T ss_pred hhhHHHHHhHHHHHHHHhhCcEEeeec
Confidence 223457888888999998655
No 482
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=94.30 E-value=0.46 Score=45.90 Aligned_cols=100 Identities=18% Similarity=0.198 Sum_probs=66.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-Hhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~-~~~ 88 (420)
++|-|+|- |.+|+.|++.|.+.... .+++ .+.+|+.++.+++.+. ++ . + ++++++ ...
T Consensus 3 ~rvgiIG~-GaIG~~va~~l~~~~~~----~~~l~~V~~~~~~~~~~~~~~--------~~--~--~---~~l~~ll~~~ 62 (267)
T PRK13301 3 HRIAFIGL-GAIASDVAAGLLADAAQ----PCQLAALTRNAADLPPALAGR--------VA--L--L---DGLPGLLAWR 62 (267)
T ss_pred eEEEEECc-cHHHHHHHHHHhcCCCC----ceEEEEEecCCHHHHHHhhcc--------Cc--c--c---CCHHHHhhcC
Confidence 57888875 99999999998775321 1444 4455666665544321 11 1 1 235564 578
Q ss_pred cCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC----CcHHHHHHHHH
Q 014694 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS----GEPEFMERMEA 132 (420)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis----ge~~~~~~~~~ 132 (420)
+|+||-||++-.. ......+.++|++++-+| .+..+.+++.+
T Consensus 63 ~DlVVE~A~~~av--~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~ 108 (267)
T PRK13301 63 PDLVVEAAGQQAI--AEHAEGCLTAGLDMIICSAGALADDALRARLIA 108 (267)
T ss_pred CCEEEECCCHHHH--HHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHH
Confidence 9999999997443 455677888999998888 45556666665
No 483
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.30 E-value=0.19 Score=48.79 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=51.7
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
++|.++| .|.+|..+++.|.+.+.. ...++.+.+|++++++.+.++++ +. .+ .| ..++++++|
T Consensus 3 ~~IgfIG-~G~MG~aia~~L~~~g~~---~~~~I~v~~r~~~~~~~l~~~~g------~~--~~--~~---~~e~~~~aD 65 (272)
T PRK12491 3 KQIGFIG-CGNMGIAMIGGMINKNIV---SPDQIICSDLNVSNLKNASDKYG------IT--IT--TN---NNEVANSAD 65 (272)
T ss_pred CeEEEEC-ccHHHHHHHHHHHHCCCC---CCceEEEECCCHHHHHHHHHhcC------cE--Ee--CC---cHHHHhhCC
Confidence 4699998 599999999999987520 01478899999999877665442 21 12 12 334567899
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+||-|+-|..
T Consensus 66 iIiLavkP~~ 75 (272)
T PRK12491 66 ILILSIKPDL 75 (272)
T ss_pred EEEEEeChHH
Confidence 9999998743
No 484
>PRK06046 alanine dehydrogenase; Validated
Probab=94.30 E-value=0.12 Score=51.59 Aligned_cols=101 Identities=16% Similarity=0.289 Sum_probs=68.8
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| +|..|+..++.+....+ ..++.+.+|+.++.+++.+++.. ...+.+...+ | +++++. +|
T Consensus 130 ~~vgiiG-~G~qa~~h~~al~~~~~-----i~~v~v~~r~~~~~~~~~~~~~~--~~~~~v~~~~--~---~~~~l~-aD 195 (326)
T PRK06046 130 KVVGIIG-AGNQARTQLLALSEVFD-----LEEVRVYDRTKSSAEKFVERMSS--VVGCDVTVAE--D---IEEACD-CD 195 (326)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhhCC-----ceEEEEECCCHHHHHHHHHHHHh--hcCceEEEeC--C---HHHHhh-CC
Confidence 4788996 58899999998876532 25789999999999988887641 1122222222 3 455565 99
Q ss_pred eeEeccCCCCCCcHHHHHH-HHHcCCcEEecCCcHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGEPEFMER 129 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~A-c~~~g~~yvdisge~~~~~~ 129 (420)
+|++|.... ++++++ ..+.|+|...+....+..++
T Consensus 196 iVv~aTps~----~P~~~~~~l~~g~hV~~iGs~~p~~~E 231 (326)
T PRK06046 196 ILVTTTPSR----KPVVKAEWIKEGTHINAIGADAPGKQE 231 (326)
T ss_pred EEEEecCCC----CcEecHHHcCCCCEEEecCCCCCcccc
Confidence 999887532 466544 35789998888776666554
No 485
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=94.28 E-value=0.23 Score=51.61 Aligned_cols=90 Identities=14% Similarity=0.009 Sum_probs=60.3
Q ss_pred CCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEec--ChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHH
Q 014694 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP---SHSLSIPILTADTTDPPS 81 (420)
Q Consensus 7 ~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagR--s~~kl~~~~~~l~~---~~~~~~~~i~~D~~d~~s 81 (420)
+..+.+|+|+||+|.||..++-.|++-.--+....+.+.+.+. +.++++...-++.. +....+.+ .. .
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-~~--~---- 192 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-TT--D---- 192 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-EE--C----
Confidence 5567899999999999999999998731101112377888998 67888777666642 11112222 22 1
Q ss_pred HHHHHhccCeeEeccCCCCCCc
Q 014694 82 LHRLCSQTKLLLNCVGPYRLHG 103 (420)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~ 103 (420)
-.+.++++|+||-++|.-...|
T Consensus 193 ~~ea~~daDvvIitag~prk~G 214 (452)
T cd05295 193 LDVAFKDAHVIVLLDDFLIKEG 214 (452)
T ss_pred CHHHhCCCCEEEECCCCCCCcC
Confidence 2567899999999999755444
No 486
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.28 E-value=0.042 Score=53.68 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=51.7
Q ss_pred eEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---C--CCCCccE-----EEEeCCCHHH
Q 014694 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPI-----LTADTTDPPS 81 (420)
Q Consensus 12 ~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~--~~~~~~~-----i~~D~~d~~s 81 (420)
+|.|+|+ |.+|..++..|++.+ ++|.+.++++++++++.+.+.. . ....+.- +...+.-..+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSG-------FQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 6899997 999999999999987 7899999999988776543210 0 0000000 0000111134
Q ss_pred HHHHHhccCeeEeccC
Q 014694 82 LHRLCSQTKLLLNCVG 97 (420)
Q Consensus 82 l~~~~~~~dvVIn~aG 97 (420)
+.+.++++|+||-|+.
T Consensus 75 ~~~~~~~aD~Vi~avp 90 (288)
T PRK09260 75 LKAAVADADLVIEAVP 90 (288)
T ss_pred HHHhhcCCCEEEEecc
Confidence 6677889999999885
No 487
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.26 E-value=0.28 Score=48.03 Aligned_cols=93 Identities=14% Similarity=0.183 Sum_probs=61.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceE-EEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHH--
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLC-- 86 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v-~iagRs~~kl~-~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~-- 86 (420)
++|-|+|+ |.+|+..+..+.+.. + .++ .++++++++.. +..++++ +.... .+ ++.++
T Consensus 2 lrVAIIG~-G~IG~~h~~~ll~~~--~----~elvaV~d~d~es~~la~A~~~G------i~~~~---~~---~e~ll~~ 62 (285)
T TIGR03215 2 VKVAIIGS-GNIGTDLMYKLLRSE--H----LEMVAMVGIDPESDGLARARELG------VKTSA---EG---VDGLLAN 62 (285)
T ss_pred cEEEEEeC-cHHHHHHHHHHHhCC--C----cEEEEEEeCCcccHHHHHHHHCC------CCEEE---CC---HHHHhcC
Confidence 68999996 999998888877643 1 444 56788876532 3334332 22221 23 33333
Q ss_pred hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcH
Q 014694 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (420)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~ 124 (420)
.+.|+|+.+.+.... ......|.++|.|.+|.+...
T Consensus 63 ~dIDaV~iaTp~~~H--~e~a~~al~aGk~VIdekPa~ 98 (285)
T TIGR03215 63 PDIDIVFDATSAKAH--ARHARLLAELGKIVIDLTPAA 98 (285)
T ss_pred CCCCEEEECCCcHHH--HHHHHHHHHcCCEEEECCccc
Confidence 368999999876543 677888999999999987544
No 488
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.26 E-value=0.14 Score=50.16 Aligned_cols=72 Identities=18% Similarity=0.276 Sum_probs=57.7
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
+-+|+|+|+ |++|..-++-...-+ .+|++.++|.++|+++-+... .++.. =..++..+++.++++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glg-------A~Vtild~n~~rl~~ldd~f~----~rv~~---~~st~~~iee~v~~a 232 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLG-------ADVTILDLNIDRLRQLDDLFG----GRVHT---LYSTPSNIEEAVKKA 232 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccC-------CeeEEEecCHHHHhhhhHhhC----ceeEE---EEcCHHHHHHHhhhc
Confidence 347999987 999999998877776 799999999999977665543 23333 346789999999999
Q ss_pred CeeEecc
Q 014694 90 KLLLNCV 96 (420)
Q Consensus 90 dvVIn~a 96 (420)
|+||+.+
T Consensus 233 DlvIgaV 239 (371)
T COG0686 233 DLVIGAV 239 (371)
T ss_pred cEEEEEE
Confidence 9999876
No 489
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.11 E-value=0.13 Score=52.04 Aligned_cols=85 Identities=14% Similarity=0.231 Sum_probs=56.2
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCcc-EEEEe-----CCCHHHHHH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP-ILTAD-----TTDPPSLHR 84 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~-~i~~D-----~~d~~sl~~ 84 (420)
|+|.|+| |||+|.-.+--|++.| ++|++.+.+++|.+.+.+.....--+.++ +++-+ +.=..+.++
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~G-------HeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~ 72 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELG-------HEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEE 72 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHH
Confidence 6899997 6999999999999998 79999999999997665533210000000 00000 111134667
Q ss_pred HHhccCeeEeccC-CCCCCc
Q 014694 85 LCSQTKLLLNCVG-PYRLHG 103 (420)
Q Consensus 85 ~~~~~dvVIn~aG-p~~~~~ 103 (420)
.++.+|+++-|+| |+...|
T Consensus 73 a~~~adv~fIavgTP~~~dg 92 (414)
T COG1004 73 AVKDADVVFIAVGTPPDEDG 92 (414)
T ss_pred HHhcCCEEEEEcCCCCCCCC
Confidence 7889999999998 444333
No 490
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.08 E-value=0.13 Score=51.09 Aligned_cols=99 Identities=20% Similarity=0.233 Sum_probs=59.4
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl-~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|-|.||||.+|+.+++.|.++.. ... ...+....|+..+- -++..+ .+. +.-++.|... .+++
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f-~~~-~~~~~AS~rSaG~~~~~f~~~-------~~~-v~~~~~~~~~----~~~~ 67 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHF-PFE-ELVLLASARSAGKKYIEFGGK-------SIG-VPEDAADEFV----FSDV 67 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCC-Ccc-eEEEEecccccCCccccccCc-------ccc-Cccccccccc----cccC
Confidence 6899999999999999999999542 110 02233333444332 111110 011 1111222222 2279
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecCCcHH
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdisge~~ 125 (420)
|+|+.|+|- .+...+...+.++|+-.||-++...
T Consensus 68 Divf~~ag~--~~s~~~~p~~~~~G~~VIdnsSa~R 101 (334)
T COG0136 68 DIVFFAAGG--SVSKEVEPKAAEAGCVVIDNSSAFR 101 (334)
T ss_pred CEEEEeCch--HHHHHHHHHHHHcCCEEEeCCcccc
Confidence 999999974 2347888889999998888876543
No 491
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=94.07 E-value=0.68 Score=45.64 Aligned_cols=76 Identities=20% Similarity=0.151 Sum_probs=52.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 13 IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~--~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|.|+|+ |++|..++..|+..+- ..++.+.++++++++....++.. .......+.. ..| .+.++++|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~-----~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~--~~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGL-----ASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR--GGD----YADAADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE--CCC----HHHhCCCC
Confidence 568887 8899999998887752 14799999999988877776642 0111112221 122 34788999
Q ss_pred eeEeccCCCC
Q 014694 91 LLLNCVGPYR 100 (420)
Q Consensus 91 vVIn~aGp~~ 100 (420)
+||.++|...
T Consensus 69 iVIitag~p~ 78 (300)
T cd00300 69 IVVITAGAPR 78 (300)
T ss_pred EEEEcCCCCC
Confidence 9999999543
No 492
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=94.06 E-value=0.36 Score=47.78 Aligned_cols=106 Identities=19% Similarity=0.194 Sum_probs=72.3
Q ss_pred CcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhc
Q 014694 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 9 ~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~ 88 (420)
++++|.|+|+.|+.++..+..+.+.... ..-+.+.+|+.++++++.++.+ +. ....+++++++.
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~----~~~vav~d~~~~~a~~~a~~~~------~~------~~~~~~~~ll~~ 65 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGG----LELVAVVDRDPERAEAFAEEFG------IA------KAYTDLEELLAD 65 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCc----eEEEEEecCCHHHHHHHHHHcC------CC------cccCCHHHHhcC
Confidence 4679999998777778788887776410 1457888999999999988774 12 122446677764
Q ss_pred --cCeeEeccCCCCCCcHHHHHHHHHcCCc-EEe--cCCcHHHHHHHHH
Q 014694 89 --TKLLLNCVGPYRLHGDPVAAACVHSGCD-YLD--ISGEPEFMERMEA 132 (420)
Q Consensus 89 --~dvVIn~aGp~~~~~~~vv~Ac~~~g~~-yvd--isge~~~~~~~~~ 132 (420)
.|+|+-+.-+... ..++.+|.++|.| +|. ++-...=.++|++
T Consensus 66 ~~iD~V~Iatp~~~H--~e~~~~AL~aGkhVl~EKPla~t~~ea~~l~~ 112 (342)
T COG0673 66 PDIDAVYIATPNALH--AELALAALEAGKHVLCEKPLALTLEEAEELVE 112 (342)
T ss_pred CCCCEEEEcCCChhh--HHHHHHHHhcCCEEEEcCCCCCCHHHHHHHHH
Confidence 6888877755433 5777888899998 444 4545544555555
No 493
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=93.95 E-value=0.53 Score=45.23 Aligned_cols=94 Identities=11% Similarity=0.051 Sum_probs=60.0
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~s---l~~~~ 86 (420)
.-.|+|+|++|.+|+.+++.+...+ .++.+++++.++++.+ ++++ .. ...+..+.+. +.+..
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g-------~~v~~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALG-------ARVIATAGSEEKLEAC-RALG------AD-VAINYRTEDFAEEVKEAT 204 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHH-HHcC------CC-EEEeCCchhHHHHHHHHh
Confidence 3479999999999999999888887 7888899998887655 4443 12 2234443332 33333
Q ss_pred --hccCeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 87 --SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 87 --~~~dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
.+.|++|+++|... .... -.|...+-+++.++
T Consensus 205 ~~~~~d~vi~~~g~~~--~~~~-~~~~~~~g~~i~~~ 238 (323)
T cd05276 205 GGRGVDVILDMVGGDY--LARN-LRALAPDGRLVLIG 238 (323)
T ss_pred CCCCeEEEEECCchHH--HHHH-HHhhccCCEEEEEe
Confidence 25899999998422 1222 22334444666654
No 494
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=93.94 E-value=0.42 Score=46.89 Aligned_cols=98 Identities=12% Similarity=0.129 Sum_probs=57.6
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
|+|-++| .|.+|..+++.|++.+ +++.+.+|++. .+.+. +.+ .. .+ ++..++++++|
T Consensus 1 m~Ig~IG-lG~MG~~ma~~L~~~G-------~~v~v~~~~~~-~~~~~-~~g------~~--~~-----~s~~~~~~~ad 57 (292)
T PRK15059 1 MKLGFIG-LGIMGTPMAINLARAG-------HQLHVTTIGPV-ADELL-SLG------AV--SV-----ETARQVTEASD 57 (292)
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCC-------CeEEEEeCCHh-HHHHH-HcC------Ce--ec-----CCHHHHHhcCC
Confidence 3688887 6999999999999987 78888888864 34432 221 11 11 22345667889
Q ss_pred eeEeccCCCCCCcHHHHH------HHHHcCCcEEecCCcH-HHHHHHHH
Q 014694 91 LLLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEP-EFMERMEA 132 (420)
Q Consensus 91 vVIn~aGp~~~~~~~vv~------Ac~~~g~~yvdisge~-~~~~~~~~ 132 (420)
+||-|+..... -+.++. .....|.-+||.|.-. ...+++.+
T Consensus 58 vVi~~v~~~~~-v~~v~~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~ 105 (292)
T PRK15059 58 IIFIMVPDTPQ-VEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFAR 105 (292)
T ss_pred EEEEeCCChHH-HHHHHcCCcchhccCCCCCEEEECCCCCHHHHHHHHH
Confidence 99888753210 011110 0012355688887444 44454444
No 495
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.94 E-value=0.048 Score=53.30 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=50.9
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCC---CCCCCccEEE--------EeCCCH
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---SHSLSIPILT--------ADTTDP 79 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~---~~~~~~~~i~--------~D~~d~ 79 (420)
.+|.|+|+ |.+|..++..|++.+ ++|.+.+++++++++..+.+.. ....+..+.. ..+.-.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G-------~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHG-------FDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLT 75 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEe
Confidence 36999986 999999999999887 7899999999877665543210 0000000000 000011
Q ss_pred HHHHHHHhccCeeEeccC
Q 014694 80 PSLHRLCSQTKLLLNCVG 97 (420)
Q Consensus 80 ~sl~~~~~~~dvVIn~aG 97 (420)
.++++.++++|+||-|+.
T Consensus 76 ~d~~~a~~~aDlVieavp 93 (287)
T PRK08293 76 TDLAEAVKDADLVIEAVP 93 (287)
T ss_pred CCHHHHhcCCCEEEEecc
Confidence 346667889999998874
No 496
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=93.91 E-value=0.46 Score=46.96 Aligned_cols=78 Identities=14% Similarity=0.087 Sum_probs=48.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCC-CCCCc-cEEEEeCCCHHHHHHHHhc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSI-PILTADTTDPPSLHRLCSQ 88 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~-~~~~~-~~i~~D~~d~~sl~~~~~~ 88 (420)
++|.|+|+ |++|..++..++..+. .+|.+.+++++..+....++... ..... ..+.. ..| .+. +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~------~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~-~~~ 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL------ADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNN---YAD-TAN 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCC---HHH-hCC
Confidence 58999997 9999999999998761 27999999766544222112110 00111 12222 123 233 689
Q ss_pred cCeeEeccCCCC
Q 014694 89 TKLLLNCVGPYR 100 (420)
Q Consensus 89 ~dvVIn~aGp~~ 100 (420)
+|+||-|+|.-.
T Consensus 70 aDiVIitag~p~ 81 (305)
T TIGR01763 70 SDIVVITAGLPR 81 (305)
T ss_pred CCEEEEcCCCCC
Confidence 999999999533
No 497
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=93.89 E-value=0.28 Score=48.38 Aligned_cols=71 Identities=18% Similarity=0.175 Sum_probs=49.5
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhccC
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~d 90 (420)
.+|.|+| .|.+|..++..|.+.+. ..+|.+.+|++++++...+ .+ +..... .+..+.++++|
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~-----~~~V~~~dr~~~~~~~a~~-~g------~~~~~~-----~~~~~~~~~aD 68 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGL-----AGEIVGADRSAETRARARE-LG------LGDRVT-----TSAAEAVKGAD 68 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHh-CC------CCceec-----CCHHHHhcCCC
Confidence 4799998 69999999999998762 1478999999888765432 22 110111 12345678899
Q ss_pred eeEeccCCC
Q 014694 91 LLLNCVGPY 99 (420)
Q Consensus 91 vVIn~aGp~ 99 (420)
+||.|+.+.
T Consensus 69 vViiavp~~ 77 (307)
T PRK07502 69 LVILCVPVG 77 (307)
T ss_pred EEEECCCHH
Confidence 999999763
No 498
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=93.83 E-value=0.09 Score=50.74 Aligned_cols=87 Identities=20% Similarity=0.092 Sum_probs=55.9
Q ss_pred CCCCcceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 014694 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (420)
Q Consensus 6 ~~~~~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~ 85 (420)
..++.++|.|+||.|.||+.+.-.| +..| . .-..++.+-...+ -+..++. +-+-...+....-++.|++.
T Consensus 24 ~~~~~~KVAvlGAaGGIGQPLSLLl-K~np-~---Vs~LaLYDi~~~~--GVaaDlS---HI~T~s~V~g~~g~~~L~~a 93 (345)
T KOG1494|consen 24 GSQRGLKVAVLGAAGGIGQPLSLLL-KLNP-L---VSELALYDIANTP--GVAADLS---HINTNSSVVGFTGADGLENA 93 (345)
T ss_pred cccCcceEEEEecCCccCccHHHHH-hcCc-c---cceeeeeecccCC--ccccccc---ccCCCCceeccCChhHHHHH
Confidence 3567889999999999999986554 4442 1 1234444432211 1222232 22333445566667899999
Q ss_pred HhccCeeEeccCCCCCC
Q 014694 86 CSQTKLLLNCVGPYRLH 102 (420)
Q Consensus 86 ~~~~dvVIn~aGp~~~~ 102 (420)
++++|+||--||--+..
T Consensus 94 l~~advVvIPAGVPRKP 110 (345)
T KOG1494|consen 94 LKGADVVVIPAGVPRKP 110 (345)
T ss_pred hcCCCEEEecCCCCCCC
Confidence 99999999999965543
No 499
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=93.82 E-value=0.36 Score=46.72 Aligned_cols=90 Identities=16% Similarity=0.195 Sum_probs=57.3
Q ss_pred ceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 11 ~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~ia-gRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
++|.|+|. |.+|+.+++.+.+... .++... .+.. +.+...+.+. ..+. . ..|.+++ ..++
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~~~------~~l~~v~~~~~-~~~~~~~~~~----~~~~--~--~~d~~~l---~~~~ 62 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHDPD------LRVDWVIVPEH-SIDAVRRALG----EAVR--V--VSSVDAL---PQRP 62 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhCCC------ceEEEEEEcCC-CHHHHhhhhc----cCCe--e--eCCHHHh---ccCC
Confidence 58999998 9999999999887631 344332 3332 2222222221 1111 1 2344444 3569
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+||-|+++... ..++..|.++|.|.+..+
T Consensus 63 DvVve~t~~~~~--~e~~~~aL~aGk~Vvi~s 92 (265)
T PRK13303 63 DLVVECAGHAAL--KEHVVPILKAGIDCAVIS 92 (265)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEEeC
Confidence 999999987533 678899999999988765
No 500
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.78 E-value=0.19 Score=49.24 Aligned_cols=73 Identities=18% Similarity=0.294 Sum_probs=49.5
Q ss_pred cceEEEEcCCcHHHHHHHHHHHHhCCCCCCCcceEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHhcc
Q 014694 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (420)
Q Consensus 10 ~~~IvV~GATG~~G~~va~~L~~~~~~~~~~~~~v~iagRs~~kl~~~~~~l~~~~~~~~~~i~~D~~d~~sl~~~~~~~ 89 (420)
..+++|+|++|.+|+.++..|.+.+ .+|.+..|... ++.+.++++
T Consensus 159 Gk~vvViG~gg~vGkpia~~L~~~g-------atVtv~~~~t~----------------------------~L~~~~~~a 203 (283)
T PRK14192 159 GKHAVVVGRSAILGKPMAMMLLNAN-------ATVTICHSRTQ----------------------------NLPELVKQA 203 (283)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCC-------CEEEEEeCCch----------------------------hHHHHhccC
Confidence 3479999999999999999998876 67888776322 233444789
Q ss_pred CeeEeccCCCCCCcHHHHHHHHHcCCcEEecC
Q 014694 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (420)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~Ac~~~g~~yvdis 121 (420)
|+|||++|--.. +-....+.|+-.+|+.
T Consensus 204 DIvI~AtG~~~~----v~~~~lk~gavViDvg 231 (283)
T PRK14192 204 DIIVGAVGKPEL----IKKDWIKQGAVVVDAG 231 (283)
T ss_pred CEEEEccCCCCc----CCHHHcCCCCEEEEEE
Confidence 999999973221 2223345566566653
Done!