Query 014696
Match_columns 420
No_of_seqs 447 out of 2254
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 07:38:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014696.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014696hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA02791 ankyrin-like protein; 100.0 1.8E-37 3.8E-42 286.4 23.5 228 2-265 16-245 (284)
2 PHA02791 ankyrin-like protein; 100.0 1.7E-34 3.6E-39 266.6 26.6 209 26-266 9-220 (284)
3 KOG4412 26S proteasome regulat 100.0 6.9E-36 1.5E-40 243.6 14.4 204 19-248 6-212 (226)
4 PHA02875 ankyrin repeat protei 100.0 1.7E-34 3.7E-39 285.0 26.8 238 17-279 3-242 (413)
5 PHA02874 ankyrin repeat protei 100.0 5.1E-34 1.1E-38 283.1 27.9 238 15-283 34-296 (434)
6 PHA03100 ankyrin repeat protei 100.0 1.6E-34 3.4E-39 291.0 24.5 221 18-265 70-308 (480)
7 PHA03100 ankyrin repeat protei 100.0 2.8E-34 6.1E-39 289.1 25.9 242 12-282 31-290 (480)
8 PHA03095 ankyrin-like protein; 100.0 5.7E-34 1.2E-38 286.2 26.3 238 15-281 46-296 (471)
9 PHA02874 ankyrin repeat protei 100.0 2E-33 4.3E-38 278.9 25.2 237 3-265 53-314 (434)
10 PHA02946 ankyin-like protein; 100.0 7.1E-33 1.5E-37 273.6 26.7 221 17-265 38-268 (446)
11 PHA02989 ankyrin repeat protei 100.0 7.2E-33 1.6E-37 279.0 24.0 255 2-264 20-313 (494)
12 PHA02716 CPXV016; CPX019; EVM0 100.0 1.4E-32 3.1E-37 280.0 24.7 253 2-283 159-543 (764)
13 PHA02878 ankyrin repeat protei 100.0 2.6E-32 5.6E-37 274.0 25.7 237 16-284 37-309 (477)
14 PHA02876 ankyrin repeat protei 100.0 3.9E-32 8.4E-37 284.2 27.6 273 3-283 163-484 (682)
15 PHA03095 ankyrin-like protein; 100.0 2.5E-32 5.4E-37 274.3 24.5 236 3-265 68-315 (471)
16 PHA02716 CPXV016; CPX019; EVM0 100.0 2.1E-32 4.4E-37 278.9 24.0 244 25-294 151-418 (764)
17 PHA02946 ankyin-like protein; 100.0 3.4E-32 7.5E-37 268.7 24.8 252 4-297 58-341 (446)
18 PHA02876 ankyrin repeat protei 100.0 5.5E-32 1.2E-36 283.0 25.4 260 15-281 40-414 (682)
19 PHA02798 ankyrin-like protein; 100.0 4.9E-32 1.1E-36 272.6 22.9 241 18-265 38-316 (489)
20 KOG0510 Ankyrin repeat protein 100.0 3.4E-32 7.4E-37 266.6 18.4 261 14-297 86-359 (929)
21 PHA02875 ankyrin repeat protei 100.0 8.3E-31 1.8E-35 258.8 25.3 193 51-266 2-194 (413)
22 KOG0509 Ankyrin repeat and DHH 100.0 6.8E-32 1.5E-36 259.9 16.9 208 17-250 45-255 (600)
23 PHA02798 ankyrin-like protein; 100.0 1.8E-30 4E-35 261.2 24.5 226 28-283 17-299 (489)
24 PHA02878 ankyrin repeat protei 100.0 1.1E-30 2.3E-35 262.4 22.6 229 3-262 55-323 (477)
25 KOG0510 Ankyrin repeat protein 100.0 1.3E-30 2.8E-35 255.6 20.9 265 16-296 121-394 (929)
26 PHA02859 ankyrin repeat protei 100.0 3.7E-30 8E-35 229.3 21.1 177 15-251 20-203 (209)
27 KOG4412 26S proteasome regulat 100.0 8.3E-31 1.8E-35 213.9 15.1 190 52-265 4-197 (226)
28 PHA02989 ankyrin repeat protei 100.0 1.1E-29 2.3E-34 256.0 24.7 239 25-296 12-306 (494)
29 KOG0508 Ankyrin repeat protein 100.0 8E-31 1.7E-35 242.7 13.2 190 15-262 41-237 (615)
30 PHA02917 ankyrin-like protein; 100.0 4.5E-29 9.7E-34 255.8 27.1 260 18-283 105-493 (661)
31 KOG0508 Ankyrin repeat protein 100.0 6.8E-30 1.5E-34 236.6 17.6 126 15-143 83-208 (615)
32 PHA02795 ankyrin-like protein; 100.0 8.9E-29 1.9E-33 237.0 20.3 210 28-265 60-287 (437)
33 PHA02792 ankyrin-like protein; 100.0 3.6E-28 7.7E-33 241.0 24.6 262 15-286 70-454 (631)
34 KOG0509 Ankyrin repeat and DHH 100.0 8.4E-29 1.8E-33 238.6 17.0 205 52-282 45-252 (600)
35 PHA02917 ankyrin-like protein; 100.0 6E-28 1.3E-32 247.5 24.1 208 29-262 12-253 (661)
36 KOG4177 Ankyrin [Cell wall/mem 100.0 2.6E-29 5.6E-34 260.8 12.1 246 14-265 372-631 (1143)
37 PHA02730 ankyrin-like protein; 100.0 2.3E-27 4.9E-32 237.7 24.9 264 14-280 39-422 (672)
38 PHA02859 ankyrin repeat protei 100.0 7.2E-27 1.6E-31 208.1 20.9 176 50-283 20-200 (209)
39 PHA02730 ankyrin-like protein; 99.9 1.6E-25 3.5E-30 224.5 23.3 106 172-281 378-502 (672)
40 KOG4177 Ankyrin [Cell wall/mem 99.9 3.4E-27 7.3E-32 245.2 11.6 216 15-256 439-660 (1143)
41 PLN03192 Voltage-dependent pot 99.9 8.8E-26 1.9E-30 239.7 22.7 177 50-252 524-701 (823)
42 PHA02795 ankyrin-like protein; 99.9 1.5E-25 3.3E-30 214.9 18.2 211 22-263 83-313 (437)
43 PHA02792 ankyrin-like protein; 99.9 4.1E-25 8.8E-30 219.3 19.9 222 17-265 106-478 (631)
44 TIGR00870 trp transient-recept 99.9 2.8E-25 6.1E-30 234.4 17.7 237 14-263 15-280 (743)
45 KOG0502 Integral membrane anky 99.9 2.6E-25 5.6E-30 187.2 11.5 217 18-262 64-280 (296)
46 KOG0514 Ankyrin repeat protein 99.9 2.6E-25 5.7E-30 200.2 11.1 162 47-265 264-432 (452)
47 KOG0507 CASK-interacting adapt 99.9 4.1E-24 8.8E-29 208.7 14.4 230 14-263 47-280 (854)
48 KOG0507 CASK-interacting adapt 99.9 2.7E-24 5.9E-29 209.9 12.8 214 47-280 45-259 (854)
49 KOG0502 Integral membrane anky 99.9 1.9E-24 4.2E-29 182.0 7.3 202 15-245 95-296 (296)
50 KOG0505 Myosin phosphatase, re 99.9 9.3E-24 2E-28 199.7 12.3 229 15-249 39-273 (527)
51 PHA02743 Viral ankyrin protein 99.9 1.5E-22 3.4E-27 173.6 14.9 137 50-241 19-162 (166)
52 PLN03192 Voltage-dependent pot 99.9 6.2E-22 1.3E-26 210.4 19.7 180 8-216 517-698 (823)
53 TIGR00870 trp transient-recept 99.9 5E-22 1.1E-26 209.8 16.1 230 50-295 16-273 (743)
54 KOG0514 Ankyrin repeat protein 99.9 2.3E-22 5E-27 181.3 11.3 162 10-229 262-429 (452)
55 PHA02741 hypothetical protein; 99.9 1.3E-21 2.9E-26 168.5 13.9 136 77-265 14-157 (169)
56 PHA02741 hypothetical protein; 99.9 2.5E-21 5.4E-26 166.9 14.9 130 49-233 19-158 (169)
57 PHA02743 Viral ankyrin protein 99.9 2.3E-21 4.9E-26 166.4 14.3 141 73-267 9-155 (166)
58 KOG0505 Myosin phosphatase, re 99.9 2.2E-21 4.8E-26 183.7 15.3 200 54-266 43-257 (527)
59 PHA02884 ankyrin repeat protei 99.9 4.3E-21 9.3E-26 177.4 16.6 116 18-134 35-153 (300)
60 PHA02884 ankyrin repeat protei 99.9 5E-21 1.1E-25 177.0 16.9 149 52-264 34-186 (300)
61 PHA02736 Viral ankyrin protein 99.8 7E-21 1.5E-25 161.6 11.1 129 49-234 15-153 (154)
62 PHA02736 Viral ankyrin protein 99.8 1.8E-20 4E-25 159.1 10.3 133 77-265 10-151 (154)
63 KOG4369 RTK signaling protein 99.8 2.1E-20 4.7E-25 188.1 7.5 261 12-299 753-1014(2131)
64 KOG0512 Fetal globin-inducing 99.8 4.7E-19 1E-23 144.2 12.7 119 18-138 65-184 (228)
65 KOG0512 Fetal globin-inducing 99.8 5E-19 1.1E-23 144.1 12.6 142 54-252 66-210 (228)
66 PF12796 Ank_2: Ankyrin repeat 99.8 8.8E-19 1.9E-23 134.2 11.4 89 20-114 1-89 (89)
67 KOG4369 RTK signaling protein 99.8 1.1E-19 2.4E-24 183.0 6.8 285 4-296 776-1077(2131)
68 KOG3676 Ca2+-permeable cation 99.8 1.2E-17 2.6E-22 165.8 14.3 208 52-262 102-330 (782)
69 KOG0195 Integrin-linked kinase 99.7 5.8E-18 1.3E-22 148.5 7.3 115 21-138 5-120 (448)
70 cd00204 ANK ankyrin repeats; 99.7 2.2E-16 4.8E-21 128.1 15.2 55 205-259 71-125 (126)
71 PF12796 Ank_2: Ankyrin repeat 99.7 5.5E-17 1.2E-21 124.2 10.8 85 55-144 1-85 (89)
72 KOG0195 Integrin-linked kinase 99.7 2.3E-17 5.1E-22 144.8 9.0 138 69-263 19-156 (448)
73 KOG4214 Myotrophin and similar 99.7 2.4E-16 5.2E-21 114.9 10.2 104 18-125 4-107 (117)
74 KOG3676 Ca2+-permeable cation 99.7 5.2E-16 1.1E-20 154.3 15.2 188 18-229 103-330 (782)
75 cd00204 ANK ankyrin repeats; 99.7 1.6E-15 3.4E-20 123.1 14.5 121 15-138 6-126 (126)
76 COG0666 Arp FOG: Ankyrin repea 99.6 3.9E-14 8.4E-19 127.4 14.7 88 51-138 73-167 (235)
77 COG0666 Arp FOG: Ankyrin repea 99.6 1.2E-13 2.5E-18 124.2 17.7 137 76-263 65-203 (235)
78 KOG4214 Myotrophin and similar 99.5 4.6E-14 1E-18 103.1 9.4 88 53-142 4-91 (117)
79 PF13637 Ank_4: Ankyrin repeat 99.5 2.6E-14 5.6E-19 98.1 6.7 54 51-104 1-54 (54)
80 KOG1710 MYND Zn-finger and ank 99.5 1.8E-13 3.8E-18 120.5 11.5 122 15-139 11-133 (396)
81 PF13857 Ank_5: Ankyrin repeat 99.5 1.8E-14 3.9E-19 99.4 4.3 55 190-247 1-56 (56)
82 PF13637 Ank_4: Ankyrin repeat 99.5 1E-13 2.3E-18 95.1 6.1 54 207-260 1-54 (54)
83 KOG0515 p53-interacting protei 99.5 2.3E-13 5.1E-18 128.6 9.6 119 19-139 553-673 (752)
84 PF13857 Ank_5: Ankyrin repeat 99.5 7.6E-14 1.6E-18 96.3 4.6 55 70-125 1-56 (56)
85 KOG1710 MYND Zn-finger and ank 99.4 6.3E-13 1.4E-17 117.1 10.8 87 52-138 13-99 (396)
86 PTZ00322 6-phosphofructo-2-kin 99.4 7.2E-13 1.6E-17 137.4 12.9 86 54-140 85-170 (664)
87 PTZ00322 6-phosphofructo-2-kin 99.4 6.1E-13 1.3E-17 137.9 12.3 106 18-126 84-196 (664)
88 KOG0515 p53-interacting protei 99.3 2.3E-12 4.9E-17 122.1 7.9 91 174-267 553-643 (752)
89 KOG0782 Predicted diacylglycer 98.9 3.5E-09 7.5E-14 101.5 9.8 121 16-139 866-988 (1004)
90 KOG0506 Glutaminase (contains 98.9 1.1E-09 2.3E-14 103.0 5.3 90 50-140 505-595 (622)
91 KOG0818 GTPase-activating prot 98.9 4.1E-09 8.9E-14 99.6 8.5 86 174-261 135-221 (669)
92 KOG0783 Uncharacterized conser 98.9 1.5E-09 3.3E-14 108.2 5.0 100 27-127 28-128 (1267)
93 KOG0506 Glutaminase (contains 98.9 2.1E-09 4.6E-14 101.0 5.4 90 18-109 508-598 (622)
94 KOG0818 GTPase-activating prot 98.9 1E-08 2.2E-13 97.0 9.4 88 17-105 134-221 (669)
95 PF13606 Ank_3: Ankyrin repeat 98.8 4.2E-09 9E-14 62.1 3.8 30 206-235 1-30 (30)
96 PF13606 Ank_3: Ankyrin repeat 98.8 6E-09 1.3E-13 61.4 4.0 28 51-78 2-29 (30)
97 PF00023 Ank: Ankyrin repeat H 98.8 7.8E-09 1.7E-13 62.7 4.4 33 206-238 1-33 (33)
98 KOG0705 GTPase-activating prot 98.8 1.9E-08 4.2E-13 96.8 8.3 91 18-108 626-718 (749)
99 PF00023 Ank: Ankyrin repeat H 98.7 1.4E-08 3E-13 61.6 4.3 31 51-81 2-32 (33)
100 KOG0782 Predicted diacylglycer 98.7 4.9E-08 1.1E-12 93.8 9.2 122 89-265 871-992 (1004)
101 PF13920 zf-C3HC4_3: Zinc fing 98.7 1.2E-08 2.5E-13 68.4 3.4 47 302-360 3-50 (50)
102 KOG0705 GTPase-activating prot 98.7 6.2E-08 1.3E-12 93.4 9.0 98 172-269 625-723 (749)
103 KOG0783 Uncharacterized conser 98.7 1.9E-08 4.1E-13 100.6 5.0 65 77-141 45-109 (1267)
104 KOG0522 Ankyrin repeat protein 98.6 8.9E-08 1.9E-12 91.8 8.3 90 18-107 22-111 (560)
105 KOG3609 Receptor-activated Ca2 98.6 2.4E-07 5.3E-12 93.8 10.1 123 14-143 23-156 (822)
106 KOG0522 Ankyrin repeat protein 98.6 4.1E-07 8.9E-12 87.4 10.6 89 53-142 22-112 (560)
107 KOG3609 Receptor-activated Ca2 98.5 2.6E-07 5.7E-12 93.6 7.6 128 53-234 27-158 (822)
108 KOG0521 Putative GTPase activa 98.3 6.6E-07 1.4E-11 93.1 5.8 109 29-138 634-742 (785)
109 KOG4172 Predicted E3 ubiquitin 98.3 9.9E-08 2.1E-12 61.9 -0.9 50 302-362 8-58 (62)
110 KOG2384 Major histocompatibili 98.2 2.8E-06 6.1E-11 71.2 6.6 68 195-265 3-71 (223)
111 KOG4265 Predicted E3 ubiquitin 98.2 7.2E-07 1.6E-11 82.1 3.2 51 301-363 290-341 (349)
112 KOG0511 Ankyrin repeat protein 98.2 7E-06 1.5E-10 75.8 8.7 73 54-128 39-111 (516)
113 KOG0521 Putative GTPase activa 98.2 1.4E-06 3E-11 90.7 4.1 81 179-262 664-744 (785)
114 KOG2384 Major histocompatibili 98.1 6.7E-06 1.5E-10 69.0 6.2 65 75-140 3-68 (223)
115 KOG0511 Ankyrin repeat protein 98.1 1.7E-05 3.6E-10 73.3 8.7 75 18-95 38-112 (516)
116 KOG4275 Predicted E3 ubiquitin 97.9 1.9E-06 4.1E-11 76.5 -0.3 47 301-363 300-347 (350)
117 KOG0520 Uncharacterized conser 97.9 5.1E-05 1.1E-09 79.1 9.5 129 77-262 567-702 (975)
118 KOG0317 Predicted E3 ubiquitin 97.9 9.1E-06 2E-10 72.6 3.1 45 301-357 239-283 (293)
119 PF13639 zf-RING_2: Ring finge 97.8 1.6E-05 3.5E-10 51.5 2.6 41 302-354 1-44 (44)
120 KOG0520 Uncharacterized conser 97.8 3.8E-05 8.2E-10 80.0 6.6 91 49-141 572-664 (975)
121 PHA02929 N1R/p28-like protein; 97.7 3E-05 6.4E-10 69.1 4.1 51 301-363 174-232 (238)
122 KOG0320 Predicted E3 ubiquitin 97.7 2E-05 4.3E-10 65.3 2.3 46 302-359 132-179 (187)
123 KOG1571 Predicted E3 ubiquitin 97.7 1.3E-05 2.8E-10 74.0 1.2 49 300-363 304-352 (355)
124 PLN03208 E3 ubiquitin-protein 97.6 8.9E-05 1.9E-09 63.3 4.4 60 301-360 18-81 (193)
125 KOG2505 Ankyrin repeat protein 97.5 0.00028 6.2E-09 67.7 7.6 70 179-248 399-471 (591)
126 PF15227 zf-C3HC4_4: zinc fing 97.5 0.00013 2.9E-09 46.4 3.7 42 304-353 1-42 (42)
127 cd00162 RING RING-finger (Real 97.5 0.00012 2.7E-09 47.2 3.7 44 303-357 1-45 (45)
128 PF13923 zf-C3HC4_2: Zinc fing 97.5 0.00012 2.5E-09 46.0 3.2 38 304-353 1-39 (39)
129 PF14634 zf-RING_5: zinc-RING 97.4 0.00019 4.1E-09 46.4 3.1 40 304-355 2-44 (44)
130 KOG1785 Tyrosine kinase negati 97.4 6.2E-05 1.3E-09 69.9 1.0 52 301-362 369-420 (563)
131 PF00097 zf-C3HC4: Zinc finger 97.3 0.00021 4.6E-09 45.4 3.1 40 304-353 1-41 (41)
132 PHA02926 zinc finger-like prot 97.3 0.00019 4.1E-09 61.9 3.7 57 300-362 169-234 (242)
133 COG5574 PEX10 RING-finger-cont 97.3 0.0001 2.2E-09 65.2 2.0 45 302-357 216-261 (271)
134 KOG0823 Predicted E3 ubiquitin 97.3 0.00017 3.6E-09 62.8 2.8 49 303-360 49-97 (230)
135 KOG2164 Predicted E3 ubiquitin 97.2 0.00023 5E-09 68.8 2.7 52 301-359 186-237 (513)
136 smart00248 ANK ankyrin repeats 97.0 0.0013 2.8E-08 37.1 3.9 28 207-234 2-29 (30)
137 PF12678 zf-rbx1: RING-H2 zinc 96.9 0.0012 2.5E-08 47.8 4.0 43 300-354 18-73 (73)
138 smart00248 ANK ankyrin repeats 96.9 0.0017 3.7E-08 36.6 4.1 26 52-77 3-28 (30)
139 smart00184 RING Ring finger. E 96.9 0.0011 2.3E-08 41.0 3.1 39 304-353 1-39 (39)
140 KOG2505 Ankyrin repeat protein 96.9 0.0021 4.5E-08 62.0 6.0 64 62-126 402-471 (591)
141 PF03158 DUF249: Multigene fam 96.8 0.019 4E-07 48.6 10.8 46 210-261 146-191 (192)
142 TIGR00599 rad18 DNA repair pro 96.8 0.00077 1.7E-08 64.8 2.4 47 301-359 26-72 (397)
143 PF06128 Shigella_OspC: Shigel 96.7 0.014 3.1E-07 50.8 9.2 122 87-233 156-280 (284)
144 TIGR00570 cdk7 CDK-activating 96.5 0.0031 6.8E-08 58.1 4.1 47 301-359 3-55 (309)
145 PF13445 zf-RING_UBOX: RING-ty 96.3 0.0033 7.1E-08 40.1 2.2 31 304-335 1-35 (43)
146 KOG1100 Predicted E3 ubiquitin 96.2 0.0028 6E-08 55.8 2.4 44 303-362 160-204 (207)
147 COG5243 HRD1 HRD ubiquitin lig 95.7 0.022 4.8E-07 53.0 5.9 54 298-363 284-350 (491)
148 smart00504 Ubox Modified RING 95.7 0.014 3E-07 40.8 3.6 44 303-358 3-46 (63)
149 PF14447 Prok-RING_4: Prokaryo 95.7 0.0058 1.3E-07 40.6 1.4 45 301-359 7-51 (55)
150 COG5432 RAD18 RING-finger-cont 95.7 0.0072 1.6E-07 54.2 2.4 56 301-369 25-80 (391)
151 KOG0824 Predicted E3 ubiquitin 95.4 0.007 1.5E-07 54.8 1.5 50 301-361 7-56 (324)
152 PF03158 DUF249: Multigene fam 95.4 0.25 5.5E-06 41.9 10.5 140 53-228 48-191 (192)
153 KOG0287 Postreplication repair 95.2 0.0085 1.8E-07 54.9 1.2 45 303-359 25-69 (442)
154 COG5540 RING-finger-containing 95.2 0.0088 1.9E-07 54.0 1.3 44 303-357 325-371 (374)
155 KOG4628 Predicted E3 ubiquitin 95.1 0.015 3.3E-07 54.6 2.6 50 302-362 230-282 (348)
156 COG5236 Uncharacterized conser 95.1 0.018 4E-07 52.9 3.0 51 301-361 61-111 (493)
157 KOG0978 E3 ubiquitin ligase in 94.6 0.01 2.3E-07 60.6 0.2 43 303-356 645-687 (698)
158 PF06128 Shigella_OspC: Shigel 94.3 0.23 5E-06 43.5 7.6 116 19-144 156-280 (284)
159 KOG2177 Predicted E3 ubiquitin 94.1 0.022 4.7E-07 54.0 1.2 44 300-355 12-55 (386)
160 PF12861 zf-Apc11: Anaphase-pr 93.7 0.089 1.9E-06 38.7 3.6 39 310-357 43-81 (85)
161 KOG2879 Predicted E3 ubiquitin 93.0 0.15 3.3E-06 45.7 4.5 59 300-368 238-297 (298)
162 KOG0802 E3 ubiquitin ligase [P 92.5 0.062 1.3E-06 55.0 1.7 44 300-355 290-338 (543)
163 KOG4739 Uncharacterized protei 92.4 0.086 1.9E-06 46.6 2.3 47 304-365 6-54 (233)
164 PF14835 zf-RING_6: zf-RING of 92.4 0.045 9.8E-07 37.7 0.4 40 303-356 9-49 (65)
165 KOG4159 Predicted E3 ubiquitin 92.3 0.077 1.7E-06 51.3 2.0 47 302-360 85-131 (398)
166 KOG4692 Predicted E3 ubiquitin 92.3 0.079 1.7E-06 49.0 1.9 49 299-359 420-468 (489)
167 PF11929 DUF3447: Domain of un 92.1 0.25 5.4E-06 36.0 4.0 45 54-105 9-53 (76)
168 KOG0827 Predicted E3 ubiquitin 91.1 0.14 3.1E-06 48.1 2.2 44 302-354 5-52 (465)
169 PF11929 DUF3447: Domain of un 90.8 0.52 1.1E-05 34.3 4.6 49 16-73 6-54 (76)
170 KOG1814 Predicted E3 ubiquitin 90.4 0.14 3E-06 48.7 1.6 50 303-356 186-238 (445)
171 KOG3799 Rab3 effector RIM1 and 89.9 0.12 2.5E-06 41.0 0.5 58 301-362 65-122 (169)
172 PF07800 DUF1644: Protein of u 88.1 0.86 1.9E-05 37.6 4.4 30 346-375 79-109 (162)
173 KOG1428 Inhibitor of type V ad 87.9 0.15 3.3E-06 55.5 -0.1 72 299-372 3484-3558(3738)
174 KOG2932 E3 ubiquitin ligase in 87.9 0.24 5.3E-06 45.1 1.2 46 303-363 92-139 (389)
175 COG5219 Uncharacterized conser 87.6 0.33 7.3E-06 50.9 2.1 51 298-358 1466-1523(1525)
176 COG5175 MOT2 Transcriptional r 87.4 0.34 7.4E-06 44.7 1.9 61 292-363 5-73 (480)
177 KOG1039 Predicted E3 ubiquitin 87.3 0.45 9.7E-06 45.1 2.7 57 299-360 159-223 (344)
178 KOG1001 Helicase-like transcri 87.0 0.26 5.6E-06 51.3 1.0 49 302-361 455-503 (674)
179 KOG1813 Predicted E3 ubiquitin 85.8 0.38 8.2E-06 43.8 1.2 48 301-360 241-288 (313)
180 KOG4185 Predicted E3 ubiquitin 85.3 0.55 1.2E-05 44.1 2.2 44 303-357 5-54 (296)
181 PF14570 zf-RING_4: RING/Ubox 83.5 1 2.3E-05 29.3 2.2 28 318-356 19-46 (48)
182 KOG0828 Predicted E3 ubiquitin 83.5 0.51 1.1E-05 45.9 1.1 31 316-357 603-633 (636)
183 COG5152 Uncharacterized conser 82.5 0.81 1.8E-05 39.0 1.8 31 302-332 197-227 (259)
184 KOG3002 Zn finger protein [Gen 82.4 0.84 1.8E-05 42.6 2.0 48 298-360 45-93 (299)
185 PF04564 U-box: U-box domain; 81.3 2.3 5.1E-05 30.5 3.6 50 303-363 6-55 (73)
186 KOG1941 Acetylcholine receptor 80.9 0.72 1.6E-05 43.6 1.0 45 304-358 368-416 (518)
187 KOG0804 Cytoplasmic Zn-finger 80.4 1.2 2.5E-05 43.1 2.3 42 301-356 175-220 (493)
188 KOG1734 Predicted RING-contain 80.2 1.5 3.3E-05 39.3 2.8 72 286-369 206-290 (328)
189 KOG0311 Predicted E3 ubiquitin 79.2 0.36 7.7E-06 45.1 -1.5 50 303-363 45-95 (381)
190 KOG4217 Nuclear receptors of t 77.7 0.57 1.2E-05 45.3 -0.7 48 299-354 267-328 (605)
191 cd07920 Pumilio Pumilio-family 72.9 24 0.00051 33.3 9.1 249 15-285 20-289 (322)
192 KOG1002 Nucleotide excision re 67.2 3 6.4E-05 41.2 1.4 52 299-357 534-585 (791)
193 PF11793 FANCL_C: FANCL C-term 67.2 1.5 3.2E-05 31.3 -0.4 40 318-358 27-66 (70)
194 smart00744 RINGv The RING-vari 65.6 9.7 0.00021 24.9 3.3 42 303-354 1-49 (49)
195 KOG1812 Predicted E3 ubiquitin 64.5 5.6 0.00012 38.8 2.8 54 281-335 127-184 (384)
196 COG4416 Com Mu-like prophage p 64.4 6.6 0.00014 25.9 2.2 39 323-369 6-44 (60)
197 KOG2231 Predicted E3 ubiquitin 62.3 7.6 0.00017 40.2 3.4 54 302-361 1-55 (669)
198 KOG0292 Vesicle coat complex C 61.0 43 0.00093 35.9 8.3 100 18-140 598-697 (1202)
199 COG5194 APC11 Component of SCF 60.9 13 0.00028 26.9 3.3 36 310-357 45-80 (88)
200 PF10272 Tmpp129: Putative tra 60.1 28 0.0006 33.5 6.5 57 299-356 269-349 (358)
201 KOG0825 PHD Zn-finger protein 57.5 5.8 0.00013 41.2 1.6 35 315-361 140-174 (1134)
202 PF04710 Pellino: Pellino; In 57.1 3.5 7.6E-05 39.4 0.0 45 312-359 358-402 (416)
203 PF03854 zf-P11: P-11 zinc fin 56.7 8.6 0.00019 24.8 1.7 42 303-357 4-45 (50)
204 KOG0297 TNF receptor-associate 55.1 6.3 0.00014 38.6 1.4 56 302-369 22-78 (391)
205 KOG0825 PHD Zn-finger protein 54.5 6.7 0.00015 40.8 1.5 51 318-374 120-172 (1134)
206 KOG3800 Predicted E3 ubiquitin 54.2 8.9 0.00019 35.1 2.0 27 317-354 21-47 (300)
207 KOG4218 Nuclear hormone recept 52.9 6.9 0.00015 36.6 1.1 50 301-355 15-75 (475)
208 COG1996 RPC10 DNA-directed RNA 52.6 4.6 0.0001 26.4 0.0 13 346-358 23-35 (49)
209 KOG1493 Anaphase-promoting com 51.9 4.2 9.1E-05 29.0 -0.3 36 312-356 44-79 (84)
210 KOG2113 Predicted RNA binding 51.9 12 0.00027 34.5 2.6 48 302-363 344-392 (394)
211 cd07920 Pumilio Pumilio-family 49.1 1.6E+02 0.0034 27.6 10.0 216 20-253 61-292 (322)
212 PF05290 Baculo_IE-1: Baculovi 48.6 15 0.00032 29.6 2.2 48 302-358 81-132 (140)
213 KOG2817 Predicted E3 ubiquitin 47.9 53 0.0011 31.7 6.1 31 316-355 352-382 (394)
214 KOG1815 Predicted E3 ubiquitin 46.8 14 0.00031 36.9 2.4 35 301-335 70-105 (444)
215 PF06906 DUF1272: Protein of u 46.7 14 0.0003 24.8 1.5 30 316-359 22-53 (57)
216 PF14569 zf-UDP: Zinc-binding 46.1 2.7 5.9E-05 30.1 -1.9 49 301-360 9-64 (80)
217 PF04641 Rtf2: Rtf2 RING-finge 46.1 17 0.00038 33.3 2.7 50 303-365 115-168 (260)
218 KOG3161 Predicted E3 ubiquitin 44.5 12 0.00026 38.2 1.4 21 315-335 29-49 (861)
219 PLN03218 maturation of RBCL 1; 43.5 1.8E+02 0.0038 32.8 10.3 12 210-221 655-666 (1060)
220 PF06221 zf-C2HC5: Putative zi 43.4 12 0.00027 25.3 1.0 29 323-360 20-48 (57)
221 PRK00398 rpoP DNA-directed RNA 42.3 17 0.00037 23.3 1.5 17 347-363 21-37 (46)
222 KOG3614 Ca2+/Mg2+-permeable ca 40.7 1.5E+02 0.0032 33.6 8.8 28 171-198 563-590 (1381)
223 TIGR02652 conserved hypothetic 40.3 10 0.00023 30.5 0.3 14 347-360 9-22 (163)
224 PF14369 zf-RING_3: zinc-finge 40.0 16 0.00035 22.0 1.0 12 348-359 22-33 (35)
225 PF11789 zf-Nse: Zinc-finger o 40.0 24 0.00051 24.0 1.9 39 304-352 14-53 (57)
226 KOG2660 Locus-specific chromos 39.1 15 0.00032 34.4 1.1 47 302-360 16-63 (331)
227 PF09654 DUF2396: Protein of u 38.9 11 0.00025 30.2 0.3 14 347-360 6-19 (161)
228 KOG4367 Predicted Zn-finger pr 37.6 18 0.00039 35.0 1.4 31 301-331 4-34 (699)
229 PF09297 zf-NADH-PPase: NADH p 37.1 11 0.00025 22.0 0.0 11 346-356 20-30 (32)
230 PLN03218 maturation of RBCL 1; 36.9 2.8E+02 0.0061 31.3 10.6 59 172-235 722-789 (1060)
231 KOG2113 Predicted RNA binding 36.7 13 0.00028 34.4 0.3 55 301-366 136-191 (394)
232 PRK11032 hypothetical protein; 36.7 36 0.00078 28.6 2.9 35 313-365 124-158 (160)
233 PF13240 zinc_ribbon_2: zinc-r 35.4 17 0.00037 19.6 0.5 13 345-357 11-23 (23)
234 PF04053 Coatomer_WDAD: Coatom 34.7 65 0.0014 32.2 4.9 162 19-230 267-429 (443)
235 PF09723 Zn-ribbon_8: Zinc rib 34.5 41 0.00089 21.1 2.3 16 345-360 24-40 (42)
236 KOG3039 Uncharacterized conser 34.3 36 0.00078 30.5 2.6 46 302-359 222-271 (303)
237 PRK14873 primosome assembly pr 31.6 33 0.00071 36.2 2.3 73 275-357 354-432 (665)
238 COG1545 Predicted nucleic-acid 30.8 14 0.00031 30.4 -0.4 21 345-365 41-62 (140)
239 PF04423 Rad50_zn_hook: Rad50 30.3 17 0.00038 24.2 0.0 11 349-359 22-32 (54)
240 smart00734 ZnF_Rad18 Rad18-lik 28.8 32 0.00069 19.1 0.9 10 348-357 2-11 (26)
241 PLN02436 cellulose synthase A 28.4 52 0.0011 36.2 3.2 50 301-361 36-92 (1094)
242 COG4306 Uncharacterized protei 28.1 38 0.00083 26.8 1.6 15 345-359 37-51 (160)
243 KOG1709 Guanidinoacetate methy 27.7 43 0.00093 29.7 2.0 41 190-233 1-41 (271)
244 PF15616 TerY-C: TerY-C metal 27.5 48 0.001 26.8 2.1 39 301-357 77-115 (131)
245 PF10571 UPF0547: Uncharacteri 27.3 36 0.00079 19.0 1.0 8 350-357 3-10 (26)
246 KOG2807 RNA polymerase II tran 26.9 27 0.00059 32.6 0.7 56 322-389 277-340 (378)
247 KOG3113 Uncharacterized conser 26.4 1.1E+02 0.0023 27.7 4.2 43 309-365 123-165 (293)
248 PLN02638 cellulose synthase A 26.3 60 0.0013 35.8 3.2 49 302-361 18-73 (1079)
249 smart00659 RPOLCX RNA polymera 26.0 23 0.0005 22.6 0.1 14 345-358 17-30 (44)
250 PHA02825 LAP/PHD finger-like p 25.6 1.4E+02 0.003 25.1 4.4 65 299-374 6-75 (162)
251 KOG3842 Adaptor protein Pellin 25.5 59 0.0013 30.2 2.5 43 313-358 372-414 (429)
252 PF04053 Coatomer_WDAD: Coatom 25.1 2.5E+02 0.0054 28.1 7.1 160 55-265 268-431 (443)
253 PRK14714 DNA polymerase II lar 24.8 48 0.001 37.1 2.1 16 347-362 709-724 (1337)
254 KOG1709 Guanidinoacetate methy 24.6 66 0.0014 28.6 2.6 36 72-107 3-38 (271)
255 PF03604 DNA_RNApol_7kD: DNA d 24.5 33 0.00072 20.2 0.5 13 346-358 16-28 (32)
256 PLN02400 cellulose synthase 24.0 33 0.00072 37.7 0.8 50 301-361 36-92 (1085)
257 KOG4445 Uncharacterized conser 23.9 25 0.00054 32.4 -0.1 58 302-359 116-187 (368)
258 KOG0826 Predicted E3 ubiquitin 23.3 89 0.0019 29.4 3.3 49 293-341 292-341 (357)
259 KOG2068 MOT2 transcription fac 23.1 76 0.0017 29.9 2.8 45 302-358 250-298 (327)
260 KOG1311 DHHC-type Zn-finger pr 23.0 42 0.0009 31.5 1.2 20 343-362 123-142 (299)
261 cd07171 NR_DBD_ER DNA-binding 22.8 1.4E+02 0.0031 21.9 3.7 28 301-331 3-30 (82)
262 PF14354 Lar_restr_allev: Rest 22.5 45 0.00098 22.6 1.0 15 347-361 3-17 (61)
263 PLN02195 cellulose synthase A 22.4 96 0.0021 33.9 3.8 47 301-358 6-59 (977)
264 KOG4216 Steroid hormone nuclea 22.2 29 0.00064 33.2 -0.0 49 301-354 46-105 (479)
265 cd00729 rubredoxin_SM Rubredox 22.1 65 0.0014 19.2 1.5 15 348-362 19-33 (34)
266 COG1645 Uncharacterized Zn-fin 21.7 19 0.00041 29.0 -1.2 11 345-355 42-52 (131)
267 PRK00418 DNA gyrase inhibitor; 21.5 55 0.0012 22.7 1.2 12 346-357 5-16 (62)
268 PF10367 Vps39_2: Vacuolar sor 21.3 77 0.0017 24.1 2.3 28 301-328 78-107 (109)
269 PF12645 HTH_16: Helix-turn-he 21.3 1.1E+02 0.0024 21.3 2.8 21 19-39 2-22 (65)
270 PF06755 DUF1219: Protein of u 20.9 2.6E+02 0.0057 21.8 4.8 20 208-233 40-59 (114)
271 PF00643 zf-B_box: B-box zinc 20.9 1E+02 0.0023 18.8 2.4 30 301-330 3-32 (42)
272 PLN02915 cellulose synthase A 20.6 92 0.002 34.4 3.2 50 301-361 15-71 (1044)
273 KOG4591 Uncharacterized conser 20.5 73 0.0016 27.7 2.0 45 83-128 221-270 (280)
274 PF04840 Vps16_C: Vps16, C-ter 20.4 1.2E+02 0.0026 28.8 3.7 51 21-71 8-62 (319)
275 cd00730 rubredoxin Rubredoxin; 20.4 45 0.00098 22.0 0.6 16 348-363 35-50 (50)
276 PLN03077 Protein ECB2; Provisi 20.3 1.1E+03 0.025 25.6 14.0 51 172-227 357-412 (857)
277 PRK09710 lar restriction allev 20.3 58 0.0012 22.7 1.1 16 347-362 6-21 (64)
No 1
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=286.43 Aligned_cols=228 Identities=20% Similarity=0.195 Sum_probs=195.0
Q ss_pred cccccccCcccCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc
Q 014696 2 KFLSIVGNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN 81 (420)
Q Consensus 2 ~~l~~~g~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d 81 (420)
+||..-|.......+.++||+|+..|+.++++.|++.+++.+.. .|+||||+|+..|+.+++++|++.|++++.+|
T Consensus 16 ~~Lis~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~----d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d 91 (284)
T PHA02791 16 SFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGMDDSQFD 91 (284)
T ss_pred HHHHhCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC----CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Confidence 45555566666667889999999999999999999999876653 24799999999999999999999999999999
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCC-ChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCC
Q 014696 82 YRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNG-GTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTG 160 (420)
Q Consensus 82 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g-~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~ 160 (420)
..|+||||+|+..|+.+++++|+++|++++..+. .| .||||+|+..|+.+++++|++++...
T Consensus 92 ~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~-~g~~TpL~~Aa~~g~~eivk~LL~~~~~~---------------- 154 (284)
T PHA02791 92 DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVMLNDVSIVSYFLSEIPST---------------- 154 (284)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCC-CCCcHHHHHHHHcCCHHHHHHHHhcCCcc----------------
Confidence 9999999999999999999999999999998876 55 59999999999999999999753110
Q ss_pred CchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH-HHHHHHcCCHHHHHHHHHhCCCccccccC
Q 014696 161 SILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS-LHYAACGGNAQCCQILIAMGASLTAENAN 239 (420)
Q Consensus 161 ~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp-Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 239 (420)
.+. ..+.++++.|+..|+.+++++|+++|++++ .++..|.|| ||+|+..|+.++|++|+++|+++|.+|..
T Consensus 155 ----~d~-~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n---~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~ 226 (284)
T PHA02791 155 ----FDL-AILLSCIHITIKNGHVDMMILLLDYMTSTN---TNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNLE 226 (284)
T ss_pred ----ccc-ccCccHHHHHHHcCCHHHHHHHHHCCCCCC---cccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCccc
Confidence 000 113455556699999999999999999999 667788877 99999999999999999999999999986
Q ss_pred CCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 240 GWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 240 G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
| |+| ++.|++++|+++...
T Consensus 227 ~-~~l------~~~e~~~~ll~~~~~ 245 (284)
T PHA02791 227 N-VLL------DDAEIAKMIIEKHVE 245 (284)
T ss_pred C-ccC------CCHHHHHHHHHhhhh
Confidence 5 555 889999999987654
No 2
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=266.61 Aligned_cols=209 Identities=18% Similarity=0.109 Sum_probs=181.2
Q ss_pred cCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHH
Q 014696 26 DGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLIL 105 (420)
Q Consensus 26 ~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 105 (420)
.++.+++++|+++++. ..+..|+||||+|+..|+.+++++|+++|++++..+ |+||||+|+..|+.++|++|++
T Consensus 9 ~~~~~~~~~Lis~~a~----~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~ 82 (284)
T PHA02791 9 WKSKQLKSFLSSKDAF----KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLF 82 (284)
T ss_pred cCHHHHHHHHHhCCCC----CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHH
Confidence 4688999999998864 244567999999999999999999999999998765 7899999999999999999999
Q ss_pred cCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chh-hHHHHHHhcCC
Q 014696 106 YKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHL-EVLLHLTLNGH 183 (420)
Q Consensus 106 ~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~l~aa~~g~ 183 (420)
+|++++..+. .|+||||+|+..|+.+++++|++++... +..+ .+. +++++|+..|+
T Consensus 83 ~Gadvn~~d~-~G~TpLh~Aa~~g~~eivk~Ll~~gadi---------------------n~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 83 SGMDDSQFDD-KGNTALYYAVDSGNMQTVKLFVKKNWRL---------------------MFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred CCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCc---------------------CccCCCCCcHHHHHHHHcCC
Confidence 9999999886 9999999999999999999999875322 1111 222 45555799999
Q ss_pred HHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCH-HHHHHHcCchhHHHHhhhC
Q 014696 184 VESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTP-LMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 184 ~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp-L~~A~~~g~~~i~~lL~~~ 262 (420)
.+++++|++++.+... ...|.||||+|++.|+.+++++|+++|++++.+|..|.|| ||+|+..|+.+++++|+++
T Consensus 141 ~eivk~LL~~~~~~~d----~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~ 216 (284)
T PHA02791 141 VSIVSYFLSEIPSTFD----LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKY 216 (284)
T ss_pred HHHHHHHHhcCCcccc----cccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHC
Confidence 9999999998765421 1248999999999999999999999999999999999987 9999999999999999999
Q ss_pred CCCc
Q 014696 263 PEGR 266 (420)
Q Consensus 263 ~~~~ 266 (420)
++..
T Consensus 217 Ga~i 220 (284)
T PHA02791 217 DINI 220 (284)
T ss_pred CCCC
Confidence 8874
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.9e-36 Score=243.60 Aligned_cols=204 Identities=25% Similarity=0.317 Sum_probs=158.0
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLI-ESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll-~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
..+.+........|+.+++..+......++.+|+||||+|+..||.+|+++|+ +.+..+|.+|..||||||.|+..|+.
T Consensus 6 ~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~ 85 (226)
T KOG4412|consen 6 LGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGND 85 (226)
T ss_pred hHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcH
Confidence 45677777788899999998885444445556799999999999999999999 56889999999999999999999999
Q ss_pred HHHHHHHHc-CCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHH-
Q 014696 98 EVVLTLILY-KANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVL- 175 (420)
Q Consensus 98 ~iv~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (420)
++|+.|+.+ |+++|...+ .|+|+||||+..|..+|+++|++++.. .+..+..+.++
T Consensus 86 evVk~Ll~r~~advna~tn-~G~T~LHyAagK~r~eIaqlLle~ga~---------------------i~~kD~~~qtpl 143 (226)
T KOG4412|consen 86 EVVKELLNRSGADVNATTN-GGQTCLHYAAGKGRLEIAQLLLEKGAL---------------------IRIKDKQGQTPL 143 (226)
T ss_pred HHHHHHhcCCCCCcceecC-CCcceehhhhcCChhhHHHHHHhcCCC---------------------CcccccccCchh
Confidence 999999998 999999987 999999999999999999888876422 12222233333
Q ss_pred HHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHH
Q 014696 176 LHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVAR 248 (420)
Q Consensus 176 l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 248 (420)
+.||.-|+++++++|+..|+.+| .+|..|+||||.|...|+.++..+|+++|||++..|+.| ||+-.|.
T Consensus 144 HRAAavGklkvie~Li~~~a~~n---~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 144 HRAAAVGKLKVIEYLISQGAPLN---TQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIAC 212 (226)
T ss_pred HHHHhccchhhHHHHHhcCCCCC---cccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHH
Confidence 33466677777777777776666 566667777777766667777777777777777667666 6665554
No 4
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=285.01 Aligned_cols=238 Identities=20% Similarity=0.199 Sum_probs=204.9
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 17 GERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
-.+|+.|+..|+.++++.|++.|++++.... .|.||||+|+..|+.+++++|+++|++++..+..+.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~--~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~ 80 (413)
T PHA02875 3 QVALCDAILFGELDIARRLLDIGINPNFEIY--DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGD 80 (413)
T ss_pred chHHHHHHHhCCHHHHHHHHHCCCCCCccCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCC
Confidence 3689999999999999999999988876543 46899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL 176 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 176 (420)
.+++++|++.|++.+......|.||||+|+..|+.+++++|++.|..... ....+.++++
T Consensus 81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~--------------------~~~~g~tpLh 140 (413)
T PHA02875 81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI--------------------PNTDKFSPLH 140 (413)
T ss_pred HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC--------------------CCCCCCCHHH
Confidence 99999999999987655445799999999999999999999987643321 1112344555
Q ss_pred HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCC-CHHHHHHHcCchhH
Q 014696 177 HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGW-TPLMVARSWHRTGL 255 (420)
Q Consensus 177 ~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~-TpL~~A~~~g~~~i 255 (420)
.|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.++
T Consensus 141 ~A~~~~~~~~v~~Ll~~g~~~~---~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~i 217 (413)
T PHA02875 141 LAVMMGDIKGIELLIDHKACLD---IEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDI 217 (413)
T ss_pred HHHHcCCHHHHHHHHhcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHH
Confidence 5699999999999999999999 7788999999999999999999999999999999998875 89999999999999
Q ss_pred HHHhhhCCCCccccCC-CCCCCchH
Q 014696 256 EDILSTQPEGRLEVLP-SPYLALPL 279 (420)
Q Consensus 256 ~~lL~~~~~~~~~~~~-~~~~~~pl 279 (420)
+++|+++++....... +..+.+|+
T Consensus 218 v~~Ll~~gad~n~~~~~~~~~~t~l 242 (413)
T PHA02875 218 VRLFIKRGADCNIMFMIEGEECTIL 242 (413)
T ss_pred HHHHHHCCcCcchHhhcCCCchHHH
Confidence 9999999887433211 34444444
No 5
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=283.11 Aligned_cols=238 Identities=25% Similarity=0.310 Sum_probs=192.6
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCC-------------------
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGV------------------- 75 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~------------------- 75 (420)
.+.++|+.|++.|+.++|++|++.|++++.... .|.||||+|+..|+.+++++|+++|+
T Consensus 34 ~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~--~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll 111 (434)
T PHA02874 34 ETTTPLIDAIRSGDAKIVELFIKHGADINHINT--KIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTIL 111 (434)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHH
Confidence 456899999999999999999999988776544 45799999999999999988887654
Q ss_pred ----CCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHH
Q 014696 76 ----DINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNR 151 (420)
Q Consensus 76 ----~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 151 (420)
+++.++..|+||||+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++....
T Consensus 112 ~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~-~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n------ 184 (434)
T PHA02874 112 DCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDD-NGCYPIHIAIKHNFFDIIKLLLEKGAYAN------ 184 (434)
T ss_pred HCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHCCcHHHHHHHHHCCCCCC------
Confidence 4667788899999999999999999999999999998886 89999999999999999999998753221
Q ss_pred HhhhccCCCCchhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 152 LRKKSNKTGSILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
..+ .+.++++.|+..|+.+++++|+++|++++ ..+..|.||||+|+..+. +++++|+ .|
T Consensus 185 ---------------~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~---~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~ 244 (434)
T PHA02874 185 ---------------VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIM---NKCKNGFTPLHNAIIHNR-SAIELLI-NN 244 (434)
T ss_pred ---------------CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCc---CCCCCCCCHHHHHHHCCh-HHHHHHH-cC
Confidence 112 23344555589999999999999999988 667789999999998765 5666666 58
Q ss_pred CCccccccCCCCHHHHHHHcC-chhHHHHhhhCCCCccccCCCCCCCchHHHHH
Q 014696 231 ASLTAENANGWTPLMVARSWH-RTGLEDILSTQPEGRLEVLPSPYLALPLMSIV 283 (420)
Q Consensus 231 ad~~~~d~~G~TpL~~A~~~g-~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l 283 (420)
++++.+|..|+||||+|+..+ +.+++++|+++++.. ...+..+.+|+..+.
T Consensus 245 ~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~--n~~d~~g~TpL~~A~ 296 (434)
T PHA02874 245 ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADI--SIKDNKGENPIDTAF 296 (434)
T ss_pred CCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCC--CCCCCCCCCHHHHHH
Confidence 899999999999999999875 789999999887762 334667778876543
No 6
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=290.98 Aligned_cols=221 Identities=24% Similarity=0.279 Sum_probs=151.5
Q ss_pred HHHHH-----HHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCCccCCCCCHHHH
Q 014696 18 ERLVS-----AARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSA--AQGHHEIVSLLIESGVDINLRNYRGQTALMQ 90 (420)
Q Consensus 18 ~~L~~-----Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa--~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~ 90 (420)
++||. |+..|+.++++.|++.+++++..+ ..|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+
T Consensus 70 t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d--~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~ 147 (480)
T PHA03100 70 TPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPD--NNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHL 147 (480)
T ss_pred CHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCC--CCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 45555 555555555555555555543222 23355555555 5555555555555555555555555555555
Q ss_pred HHHcC--cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc
Q 014696 91 ACQHG--HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER 168 (420)
Q Consensus 91 A~~~g--~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
|+..| +.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++.... ..
T Consensus 148 A~~~~~~~~~iv~~Ll~~g~din~~d~-~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~---------------------~~ 205 (480)
T PHA03100 148 YLESNKIDLKILKLLIDKGVDINAKNR-YGYTPLHIAVEKGNIDVIKFLLDNGADIN---------------------AG 205 (480)
T ss_pred HHHcCCChHHHHHHHHHCCCCcccccC-CCCCHHHHHHHhCCHHHHHHHHHcCCCcc---------------------CC
Confidence 55555 55555555555555555554 55555555555555555555555433211 11
Q ss_pred cch-------hhHHHHHHhcCC--HHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccC
Q 014696 169 YFH-------LEVLLHLTLNGH--VESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENAN 239 (420)
Q Consensus 169 ~~~-------~~~~l~aa~~g~--~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 239 (420)
... .+++..|+..|+ .+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|+|++.+|..
T Consensus 206 ~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din---~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~ 282 (480)
T PHA03100 206 DIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPIN---IKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKY 282 (480)
T ss_pred CCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 111 344555689999 999999999999999 77889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 240 GWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 240 G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
|.||+++|+..++.+++++|+++++.
T Consensus 283 g~tpl~~A~~~~~~~iv~~Ll~~g~~ 308 (480)
T PHA03100 283 GDTPLHIAILNNNKEIFKLLLNNGPS 308 (480)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence 99999999999999999999999875
No 7
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=289.10 Aligned_cols=242 Identities=23% Similarity=0.324 Sum_probs=213.2
Q ss_pred cCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHH-----HHHcCcHHHHHHHHHcCCCCCCccCCCCC
Q 014696 12 GCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHY-----SAAQGHHEIVSLLIESGVDINLRNYRGQT 86 (420)
Q Consensus 12 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~-----Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~T 86 (420)
....+.++||.|+..|+.++|++|++.|++++.... .|.||||+ |+..|+.+++++|+++|++++..|..|.|
T Consensus 31 ~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~--~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~t 108 (480)
T PHA03100 31 SYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTK--NNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGIT 108 (480)
T ss_pred hhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccc--cCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCc
Confidence 344667899999999999999999999988876544 45899999 99999999999999999999999999999
Q ss_pred HHHHHH--HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC--CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCc
Q 014696 87 ALMQAC--QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG--HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSI 162 (420)
Q Consensus 87 pL~~A~--~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 162 (420)
|||+|+ ..|+.+++++|+++|++++..+. .|.||||+|+..| +.+++++|++++....
T Consensus 109 pL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din----------------- 170 (480)
T PHA03100 109 PLLYAISKKSNSYSIVEYLLDNGANVNIKNS-DGENLLHLYLESNKIDLKILKLLIDKGVDIN----------------- 170 (480)
T ss_pred hhhHHHhcccChHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHcCCChHHHHHHHHHCCCCcc-----------------
Confidence 999999 99999999999999999999886 9999999999999 9999999998754321
Q ss_pred hhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCC------ccHHHHHHHcCC--HHHHHHHHHhCCCc
Q 014696 163 LEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAG------STSLHYAACGGN--AQCCQILIAMGASL 233 (420)
Q Consensus 163 ~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g------~TpLh~Aa~~g~--~~iv~~Ll~~gad~ 233 (420)
..+ .+.++++.|+..|+.+++++|+++|++++ ..+..| .||||+|+..|+ .+++++|+++|+++
T Consensus 171 ----~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~---~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di 243 (480)
T PHA03100 171 ----AKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN---AGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI 243 (480)
T ss_pred ----cccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc---CCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC
Confidence 111 33445556699999999999999999999 566677 899999999999 99999999999999
Q ss_pred cccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 234 TAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 234 ~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
+.+|..|+||||+|+..|+.+++++|++.++. ....+..+.+|+..+
T Consensus 244 n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad--~n~~d~~g~tpl~~A 290 (480)
T PHA03100 244 NIKDVYGFTPLHYAVYNNNPEFVKYLLDLGAN--PNLVNKYGDTPLHIA 290 (480)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCcHHHHH
Confidence 99999999999999999999999999999984 233567788887543
No 8
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=286.22 Aligned_cols=238 Identities=22% Similarity=0.196 Sum_probs=169.9
Q ss_pred CCCHHHHHHHHcC---CHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcC-cHHHHHHHHHcCCCCCCccCCCCCHHHH
Q 014696 15 ASGERLVSAARDG---DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQG-HHEIVSLLIESGVDINLRNYRGQTALMQ 90 (420)
Q Consensus 15 ~~~~~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g-~~~iv~~Ll~~g~~v~~~d~~g~TpL~~ 90 (420)
.+.++||.|+..| +.++++.|++.|++++..+. .|.||||+|+..| +.+++++|+++|++++.+|..|+||||+
T Consensus 46 ~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~--~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~ 123 (471)
T PHA03095 46 YGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER--CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV 123 (471)
T ss_pred CCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 4567888888887 88888888888887776554 4578888888888 5888888888888888888888888888
Q ss_pred HH--HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC--CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcc
Q 014696 91 AC--QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG--HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFD 166 (420)
Q Consensus 91 A~--~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (420)
|+ ..++.+++++|+++|++++..+. .|.||||+|+..+ +.+++++|++++.....
T Consensus 124 a~~~~~~~~~iv~~Ll~~gad~~~~d~-~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~-------------------- 182 (471)
T PHA03095 124 YLSGFNINPKVIRLLLRKGADVNALDL-YGMTPLAVLLKSRNANVELLRLLIDAGADVYA-------------------- 182 (471)
T ss_pred HhhCCcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc--------------------
Confidence 88 45677888888888888887775 7888888877765 57788888876543211
Q ss_pred cccchhhHHHH-HH--hcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCH--HHHHHHHHhCCCccccccCCC
Q 014696 167 ERYFHLEVLLH-LT--LNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNA--QCCQILIAMGASLTAENANGW 241 (420)
Q Consensus 167 ~~~~~~~~~l~-aa--~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~--~iv~~Ll~~gad~~~~d~~G~ 241 (420)
.+..+.+++| ++ ..++.+++++|+++|++++ .+|..|.||||+|+..|+. .+++.|+++|+++|.+|..|+
T Consensus 183 -~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~---~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~ 258 (471)
T PHA03095 183 -VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA---ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQ 258 (471)
T ss_pred -cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCC
Confidence 1222333333 33 2466777777777777777 5677777777777777754 567777777777777777777
Q ss_pred CHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 242 TPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 242 TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
||||+|+..|+.+++++|++.++.. ...+..+.+|++.
T Consensus 259 TpLh~A~~~~~~~~v~~LL~~gad~--n~~~~~g~tpl~~ 296 (471)
T PHA03095 259 TPLHYAAVFNNPRACRRLIALGADI--NAVSSDGNTPLSL 296 (471)
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC--cccCCCCCCHHHH
Confidence 7777777777777777777776652 2235556666543
No 9
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2e-33 Score=278.92 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=197.7
Q ss_pred ccccccCccc--CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcc---------------------cccCCCCCCcHHHHHH
Q 014696 3 FLSIVGNSFG--CSASGERLVSAARDGDLQEAKALLEYNPRLV---------------------RYSTFGVRNSPLHYSA 59 (420)
Q Consensus 3 ~l~~~g~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~---------------------~~~~~~~g~t~Lh~Aa 59 (420)
+|...|.... ...+.++|+.|+..|+.+++++|++++.+.. ....+..|.||||+|+
T Consensus 53 ~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~ 132 (434)
T PHA02874 53 LFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAI 132 (434)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHH
Confidence 4444554442 2345689999999999999999999876532 1223456799999999
Q ss_pred HcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHH
Q 014696 60 AQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLA 139 (420)
Q Consensus 60 ~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~ 139 (420)
..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 133 ~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~-~g~tpL~~A~~~g~~~iv~~Ll~ 211 (434)
T PHA02874 133 KKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDN-NGESPLHNAAEYGDYACIKLLID 211 (434)
T ss_pred HCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998886 99999999999999999999998
Q ss_pred hcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcC-
Q 014696 140 DYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGG- 218 (420)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g- 218 (420)
.+... ......+.+++|.|..++.+.+++|+ .|++++ .++..|.||||+|+..+
T Consensus 212 ~g~~i---------------------~~~~~~g~TpL~~A~~~~~~~i~~Ll-~~~~in---~~d~~G~TpLh~A~~~~~ 266 (434)
T PHA02874 212 HGNHI---------------------MNKCKNGFTPLHNAIIHNRSAIELLI-NNASIN---DQDIDGSTPLHHAINPPC 266 (434)
T ss_pred CCCCC---------------------cCCCCCCCCHHHHHHHCChHHHHHHH-cCCCCC---CcCCCCCCHHHHHHhcCC
Confidence 75322 11222345566654444556777777 688888 77889999999999876
Q ss_pred CHHHHHHHHHhCCCccccccCCCCHHHHHHHcC-chhHHHHhhhCCCC
Q 014696 219 NAQCCQILIAMGASLTAENANGWTPLMVARSWH-RTGLEDILSTQPEG 265 (420)
Q Consensus 219 ~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g-~~~i~~lL~~~~~~ 265 (420)
+.+++++|+++|+|++.+|..|.|||++|++++ +.++++.|+.+...
T Consensus 267 ~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~ 314 (434)
T PHA02874 267 DIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANAVL 314 (434)
T ss_pred cHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCc
Confidence 899999999999999999999999999999987 67788988887654
No 10
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=273.57 Aligned_cols=221 Identities=19% Similarity=0.182 Sum_probs=186.3
Q ss_pred CHHHHHHH--HcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 17 GERLVSAA--RDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 17 ~~~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.||.++ ..++.++|+.|++++++++..+. .|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..
T Consensus 38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~--~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~ 115 (446)
T PHA02946 38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDD--DGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT 115 (446)
T ss_pred ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCC--CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 46777765 45578999999999999877554 569999999999999999999999999999999999999999987
Q ss_pred C--cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchh
Q 014696 95 G--HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHL 172 (420)
Q Consensus 95 g--~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
+ ..+++++|+++|++++...+..|.|||| |+..|+.+++++|++.+... +..+..+
T Consensus 116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~---------------------~~~d~~G 173 (446)
T PHA02946 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA---------------------RIVDKFG 173 (446)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccc---------------------cccCCCC
Confidence 6 4899999999999999754448999997 66779999999999864322 2223334
Q ss_pred hHHHH-HH--hcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcC--CHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 173 EVLLH-LT--LNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGG--NAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 173 ~~~l~-aa--~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g--~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
.+++| ++ .+++.+++++|+++|++++ .+|..|.||||+|+..| +.+++++|++ |+++|.+|..|+||||+|
T Consensus 174 ~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin---~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A 249 (446)
T PHA02946 174 KNHIHRHLMSDNPKASTISWMMKLGISPS---KPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLL 249 (446)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 44554 43 3556899999999999999 77899999999999986 8899999995 999999999999999999
Q ss_pred HHcCc-hhHHHHhhhCCCC
Q 014696 248 RSWHR-TGLEDILSTQPEG 265 (420)
Q Consensus 248 ~~~g~-~~i~~lL~~~~~~ 265 (420)
++.++ .+++++|+++++.
T Consensus 250 ~~~~~~~~~~~~Ll~~g~~ 268 (446)
T PHA02946 250 IKTLSPAHLINKLLSTSNV 268 (446)
T ss_pred HHhCChHHHHHHHHhCCCC
Confidence 99988 5899999888753
No 11
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.2e-33 Score=278.97 Aligned_cols=255 Identities=15% Similarity=0.167 Sum_probs=186.4
Q ss_pred cccccccCcccCC-CCCHHHHHHHHc--CCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcC------cHHHHHHHHH
Q 014696 2 KFLSIVGNSFGCS-ASGERLVSAARD--GDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQG------HHEIVSLLIE 72 (420)
Q Consensus 2 ~~l~~~g~~~~~~-~~~~~L~~Aa~~--g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g------~~~iv~~Ll~ 72 (420)
++|...|.+.-.. .+.++|+.++.. ++.++|+.|+++|++++... .+.||||.|+.++ +.+++++|++
T Consensus 20 ~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~---~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~ 96 (494)
T PHA02989 20 EFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG---YIETPLCAVLRNREITSNKIKKIVKLLLK 96 (494)
T ss_pred HHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC---CCCCcHHHHHhccCcchhhHHHHHHHHHH
Confidence 4555566665432 355778765554 37899999999999988643 4589999998754 5789999999
Q ss_pred cCCCCCCccCCCCCHHHHHHHc---CcHHHHHHHHHcCCCC-CccccCCCChHHHHHHHc--CCHHHHHHHHHhcCCCCh
Q 014696 73 SGVDINLRNYRGQTALMQACQH---GHWEVVLTLILYKANI-HRADYLNGGTALHLAALN--GHSRCIRLLLADYIPSVP 146 (420)
Q Consensus 73 ~g~~v~~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~~-~~~~~~~g~tpL~~A~~~--g~~~iv~~Ll~~~~~~~~ 146 (420)
+|+|+|.+|..|.||||.|+.. |+.+++++|+++|+++ +..+. .|+||||+|+.. ++.+++++|+++|.....
T Consensus 97 ~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~-~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~ 175 (494)
T PHA02989 97 FGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNS-RGYNLLHMYLESFSVKKDVIKILLSFGVNLFE 175 (494)
T ss_pred CCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCC-CCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 9999999999999999988765 6799999999999999 66665 999999998764 689999999998875432
Q ss_pred h----hHHHHhhh--cc----C-------CCCchhcccccchhhHHHHH-Hh------cCCHHHHHHHHHcCCCcccccc
Q 014696 147 N----AWNRLRKK--SN----K-------TGSILEFDERYFHLEVLLHL-TL------NGHVESVQLLLDLGASVSEYLS 202 (420)
Q Consensus 147 ~----~~~~~~~~--~~----~-------~~~~~~~~~~~~~~~~~l~a-a~------~g~~~~v~~Ll~~ga~~~~~~~ 202 (420)
. ....+... .. . .....+.+..+..+.++++. +. .+..+++++|+. |++++ .
T Consensus 176 ~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn---~ 251 (494)
T PHA02989 176 KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKIN---K 251 (494)
T ss_pred cccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCC---C
Confidence 1 00000000 00 0 00011112222233344433 11 123455554443 46666 5
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
+|..|.||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+..|+.+++++|++...
T Consensus 252 ~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 252 KDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 67789999999999999999999999999999999999999999999999999999988653
No 12
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.4e-32 Score=280.02 Aligned_cols=253 Identities=22% Similarity=0.200 Sum_probs=193.3
Q ss_pred ccccccc-Cccc---CCCCCHHHHHHHH--cCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCc--HHHHHHHHHc
Q 014696 2 KFLSIVG-NSFG---CSASGERLVSAAR--DGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGH--HEIVSLLIES 73 (420)
Q Consensus 2 ~~l~~~g-~~~~---~~~~~~~L~~Aa~--~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~--~~iv~~Ll~~ 73 (420)
++|...| .+.- ...+.++||.|+. .++.+++++|+++|++++..+. .|.||||+|+..|+ .++|++|+++
T Consensus 159 k~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~--~G~TPLH~Aa~~g~~~~eIVklLLe~ 236 (764)
T PHA02716 159 KYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNN--HLITPLHTYLITGNVCASVIKKIIEL 236 (764)
T ss_pred HHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCC--CCCCHHHHHHHcCCCCHHHHHHHHHc
Confidence 4555555 3321 2346689998865 4689999999999998887554 46899999999995 4999999999
Q ss_pred CCCCCCccCCCCCHHHHH-------------------------------------HHcCcHHHHHHHHHcCCCCCccccC
Q 014696 74 GVDINLRNYRGQTALMQA-------------------------------------CQHGHWEVVLTLILYKANIHRADYL 116 (420)
Q Consensus 74 g~~v~~~d~~g~TpL~~A-------------------------------------~~~g~~~iv~~Ll~~ga~~~~~~~~ 116 (420)
|+++|.+|..|+||||+| ++.|+.+++++|+++|++++.++.
T Consensus 237 GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~- 315 (764)
T PHA02716 237 GGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDS- 315 (764)
T ss_pred CCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCC-
Confidence 999999999999999975 445788999999999999999986
Q ss_pred CCChHHHHHHH--cCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHH-Hh-------------
Q 014696 117 NGGTALHLAAL--NGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHL-TL------------- 180 (420)
Q Consensus 117 ~g~tpL~~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a-a~------------- 180 (420)
.|+||||+|+. .++.+++++|+++|... +..+..+.+++|. +.
T Consensus 316 ~G~TPLH~Aaa~~~~~~eIVklLLe~GADI---------------------N~kD~~G~TPLH~A~~~lav~~~ld~~~~ 374 (764)
T PHA02716 316 AGRTCLHQYILRHNISTDIIKLLHEYGNDL---------------------NEPDNIGNTVLHTYLSMLSVVNILDPETD 374 (764)
T ss_pred CCCCHHHHHHHHhCCCchHHHHHHHcCCCC---------------------ccCCCCCCCHHHHHHHhhhhhcccccccc
Confidence 99999999864 46889999999875432 2233344455553 22
Q ss_pred -cCCHHHHHHHHHcCCCcccccccCCCCccHHHH----HHHcCCHHHHHHHHHhCC------------------------
Q 014696 181 -NGHVESVQLLLDLGASVSEYLSVSGAGSTSLHY----AACGGNAQCCQILIAMGA------------------------ 231 (420)
Q Consensus 181 -~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~----Aa~~g~~~iv~~Ll~~ga------------------------ 231 (420)
.++.+++++|+++|++++ .++..|.||||. |...++.+++++|++.|+
T Consensus 375 ~~~~~eVVklLL~~GADIn---~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lh 451 (764)
T PHA02716 375 NDIRLDVIQCLISLGADIT---AVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIH 451 (764)
T ss_pred ccChHHHHHHHHHCCCCCC---CcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHH
Confidence 368899999999999998 778889999984 233567888888877543
Q ss_pred -------------------------------------CccccccCCCCHHHHHHHcCchhH-----HHHhhhCCCCcccc
Q 014696 232 -------------------------------------SLTAENANGWTPLMVARSWHRTGL-----EDILSTQPEGRLEV 269 (420)
Q Consensus 232 -------------------------------------d~~~~d~~G~TpL~~A~~~g~~~i-----~~lL~~~~~~~~~~ 269 (420)
++|..|..|+||||+|+..|+.++ +++|++.++.. .
T Consensus 452 h~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADI-N- 529 (764)
T PHA02716 452 HIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNI-N- 529 (764)
T ss_pred HHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCC-c-
Confidence 224456789999999999887744 49999888762 2
Q ss_pred CCCCCCCchHHHHH
Q 014696 270 LPSPYLALPLMSIV 283 (420)
Q Consensus 270 ~~~~~~~~pl~~~l 283 (420)
..+..+.+|++.++
T Consensus 530 ~~d~~G~TPLh~A~ 543 (764)
T PHA02716 530 IPTKNGVTPLMLTM 543 (764)
T ss_pred ccCCCCCCHHHHHH
Confidence 35778888876443
No 13
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=274.04 Aligned_cols=237 Identities=23% Similarity=0.207 Sum_probs=189.1
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+-+|||.|+..|+.++|+.|++.|++++..+. .|.||||+|+..|+.+++++|++.+.+.+. ..+.+||+.|+..+
T Consensus 37 ~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~--~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~a~~~~ 112 (477)
T PHA02878 37 PFIPLHQAVEARNLDVVKSLLTRGHNVNQPDH--RDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKDAFNNR 112 (477)
T ss_pred CcchHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHHHHHcC
Confidence 34789999999999999999999998876554 568999999999999999999988765554 45778888888776
Q ss_pred cHH---------------------------------HHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcC
Q 014696 96 HWE---------------------------------VVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYI 142 (420)
Q Consensus 96 ~~~---------------------------------iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~ 142 (420)
+.+ ++++|+++|++++..+...|.||||+|+..|+.+++++|++.+.
T Consensus 113 ~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~ga 192 (477)
T PHA02878 113 NVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGA 192 (477)
T ss_pred CHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCC
Confidence 643 66677777888888886339999999999999999999997653
Q ss_pred CCChhhHHHHhhhccCCCCchhcccccc-hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHc-CCH
Q 014696 143 PSVPNAWNRLRKKSNKTGSILEFDERYF-HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACG-GNA 220 (420)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~-g~~ 220 (420)
.. +..+. +.++++.|+..|+.+++++|+++|++++ .++..|.||||+|+.. ++.
T Consensus 193 d~---------------------n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in---~~d~~g~TpLh~A~~~~~~~ 248 (477)
T PHA02878 193 NV---------------------NIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD---ARDKCGNTPLHISVGYCKDY 248 (477)
T ss_pred CC---------------------CCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHhcCCH
Confidence 22 12222 3344455588899999999999999998 6788899999999975 688
Q ss_pred HHHHHHHHhCCCcccccc-CCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHH
Q 014696 221 QCCQILIAMGASLTAENA-NGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVK 284 (420)
Q Consensus 221 ~iv~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~ 284 (420)
+++++|+++|++++.++. .|+||||+| .++.+++++|++.++.. ...+..+.+|++.++.
T Consensus 249 ~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadi--n~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 249 DILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADI--NSLNSYKLTPLSSAVK 309 (477)
T ss_pred HHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHH
Confidence 999999999999998876 799999999 46778899999888762 2346778888876654
No 14
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.9e-32 Score=284.17 Aligned_cols=273 Identities=22% Similarity=0.233 Sum_probs=206.3
Q ss_pred ccccccCccc--CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHH---------
Q 014696 3 FLSIVGNSFG--CSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLI--------- 71 (420)
Q Consensus 3 ~l~~~g~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll--------- 71 (420)
+|...|.+.. ...+.+|||.|++.|+.++|++|+++|++++..... |.||||+|+..|+.+++++|+
T Consensus 163 ~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~--g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~ 240 (682)
T PHA02876 163 MLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALD--DLSVLECAVDSKNIDTIKAIIDNRSNINKN 240 (682)
T ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCC--CCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Confidence 4444455442 234668999999999999999999999888765543 478999888888877776554
Q ss_pred --------------------HcCCCCCCccCCCCCHHHHHHHcCcH-HHHHHHHHcCCCCCccccCCCChHHHHHHHcC-
Q 014696 72 --------------------ESGVDINLRNYRGQTALMQACQHGHW-EVVLTLILYKANIHRADYLNGGTALHLAALNG- 129 (420)
Q Consensus 72 --------------------~~g~~v~~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g- 129 (420)
+.|++++..|..|.||||+|+..|+. +++++|++.|++++..+. .|.||||+|+..|
T Consensus 241 ~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~-~g~TpLh~Aa~~g~ 319 (682)
T PHA02876 241 DLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNI-KGETPLYLMAKNGY 319 (682)
T ss_pred cHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhCC
Confidence 45567777888899999999999986 689999999999998886 8999999999999
Q ss_pred CHHHHHHHHHhcCCCChhh---HHHHhhhc--cC--------CCCchhcccccchhhH-HHHHHhcCCHHHHHHHHHcCC
Q 014696 130 HSRCIRLLLADYIPSVPNA---WNRLRKKS--NK--------TGSILEFDERYFHLEV-LLHLTLNGHVESVQLLLDLGA 195 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~---~~~~~~~~--~~--------~~~~~~~~~~~~~~~~-~l~aa~~g~~~~v~~Ll~~ga 195 (420)
+.+++++|+..+....... ...+.... .. .....+.+..+..+.+ ++.|+..|+.+++++|+++|+
T Consensus 320 ~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ga 399 (682)
T PHA02876 320 DTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGA 399 (682)
T ss_pred CHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 5899999998776543211 11110000 00 0011122333333444 445589999999999999999
Q ss_pred CcccccccCCCCccHHHHHHHcCC-HHHHHHHHHhCCCccccccCCCCHHHHHHHcC-chhHHHHhhhCCCCccccCCCC
Q 014696 196 SVSEYLSVSGAGSTSLHYAACGGN-AQCCQILIAMGASLTAENANGWTPLMVARSWH-RTGLEDILSTQPEGRLEVLPSP 273 (420)
Q Consensus 196 ~~~~~~~~~~~g~TpLh~Aa~~g~-~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g-~~~i~~lL~~~~~~~~~~~~~~ 273 (420)
+++ ..+..|.||||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..+ +.+++++|++.++.. ...+.
T Consensus 400 d~~---~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~--n~~d~ 474 (682)
T PHA02876 400 DIE---ALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADV--NAINI 474 (682)
T ss_pred Ccc---ccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCC--CCCCC
Confidence 999 677889999999998766 56799999999999999999999999999876 689999999998762 33577
Q ss_pred CCCchHHHHH
Q 014696 274 YLALPLMSIV 283 (420)
Q Consensus 274 ~~~~pl~~~l 283 (420)
.+.+|+..+.
T Consensus 475 ~g~tpl~~a~ 484 (682)
T PHA02876 475 QNQYPLLIAL 484 (682)
T ss_pred CCCCHHHHHH
Confidence 8888887654
No 15
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=274.34 Aligned_cols=236 Identities=23% Similarity=0.238 Sum_probs=201.8
Q ss_pred ccccccCcc--cCCCCCHHHHHHHHcC-CHHHHHHHHHhCCCcccccCCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCC
Q 014696 3 FLSIVGNSF--GCSASGERLVSAARDG-DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSA--AQGHHEIVSLLIESGVDI 77 (420)
Q Consensus 3 ~l~~~g~~~--~~~~~~~~L~~Aa~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa--~~g~~~iv~~Ll~~g~~v 77 (420)
+|...|.+. ....+.+|||.|+..| +.++++.|++++++++..+. .|+||||+|+ ..++.+++++|+++|+++
T Consensus 68 ~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~--~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~ 145 (471)
T PHA03095 68 LLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDK--VGRTPLHVYLSGFNINPKVIRLLLRKGADV 145 (471)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC--CCCCHHHHHhhCCcCCHHHHHHHHHcCCCC
Confidence 344444443 2236779999999999 59999999999999877554 4589999999 567899999999999999
Q ss_pred CCccCCCCCHHHHHHHcC--cHHHHHHHHHcCCCCCccccCCCChHHHHHHHc--CCHHHHHHHHHhcCCCChhhHHHHh
Q 014696 78 NLRNYRGQTALMQACQHG--HWEVVLTLILYKANIHRADYLNGGTALHLAALN--GHSRCIRLLLADYIPSVPNAWNRLR 153 (420)
Q Consensus 78 ~~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~~ 153 (420)
+..|..|.||||+|+..+ +.+++++|+++|++++..+. .|.||||+|+.. ++.+++++|++.+....
T Consensus 146 ~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~-~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~-------- 216 (471)
T PHA03095 146 NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDD-RFRSLLHHHLQSFKPRARIVRELIRAGCDPA-------- 216 (471)
T ss_pred CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc--------
Confidence 999999999999999876 68999999999999999865 999999999875 78899999998754332
Q ss_pred hhccCCCCchhcccccchhhHHHH-HHhcCCH--HHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 154 KKSNKTGSILEFDERYFHLEVLLH-LTLNGHV--ESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~-aa~~g~~--~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
..+..+.+++| |+..|+. .+++.|++.|++++ .+|..|.||||+|+..|+.+++++|+++|
T Consensus 217 -------------~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din---~~d~~g~TpLh~A~~~~~~~~v~~LL~~g 280 (471)
T PHA03095 217 -------------ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN---ARNRYGQTPLHYAAVFNNPRACRRLIALG 280 (471)
T ss_pred -------------ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 22334445555 4777764 68899999999999 77889999999999999999999999999
Q ss_pred CCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 231 ASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 231 ad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
+|++.+|.+|+||||+|+.+|+.+++++|++.+..
T Consensus 281 ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~ 315 (471)
T PHA03095 281 ADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPS 315 (471)
T ss_pred CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence 99999999999999999999999999999988765
No 16
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=2.1e-32 Score=278.87 Aligned_cols=244 Identities=19% Similarity=0.124 Sum_probs=197.6
Q ss_pred HcCCHHHHHHHHHhC-CCcccccCCCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc--HHH
Q 014696 25 RDGDLQEAKALLEYN-PRLVRYSTFGVRNSPLHYSAA--QGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH--WEV 99 (420)
Q Consensus 25 ~~g~~~~v~~Ll~~~-~~~~~~~~~~~g~t~Lh~Aa~--~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~--~~i 99 (420)
+.++.++|++|++.+ ++++... +..|.||||+|+. +++.+++++|+++|+++|.+|..|.||||+|+..|+ .++
T Consensus 151 ~~v~leiVk~LLe~G~ADIN~~~-d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eI 229 (764)
T PHA02716 151 RGIDLDLIKYMVDVGIVNLNYVC-KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASV 229 (764)
T ss_pred cCCCHHHHHHHHHCCCCCccccc-CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHH
Confidence 468999999999999 8887652 2456999999865 468999999999999999999999999999999995 599
Q ss_pred HHHHHHcCCCCCccccCCCChHHHHHH---HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH
Q 014696 100 VLTLILYKANIHRADYLNGGTALHLAA---LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL 176 (420)
Q Consensus 100 v~~Ll~~ga~~~~~~~~~g~tpL~~A~---~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 176 (420)
|++|+++|++++.++. .|+||||+|+ ..++.++++.|++...... ..........++
T Consensus 230 VklLLe~GADVN~kD~-~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~-------------------~~~~~~~L~~~i 289 (764)
T PHA02716 230 IKKIIELGGDMDMKCV-NGMSPIMTYIINIDNINPEITNIYIESLDGNK-------------------VKNIPMILHSYI 289 (764)
T ss_pred HHHHHHcCCCCCCCCC-CCCCHHHHHHHhhhccCHHHHHHHHHhccccc-------------------cccchhhhHHHH
Confidence 9999999999999986 9999999986 5689999999987521100 000000111234
Q ss_pred HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHH--cCCHHHHHHHHHhCCCccccccCCCCHHHHHHH-----
Q 014696 177 HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAAC--GGNAQCCQILIAMGASLTAENANGWTPLMVARS----- 249 (420)
Q Consensus 177 ~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~--~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~----- 249 (420)
.|+..|+.+++++|+++|++++ .+|..|+||||+|+. .++.+++++|+++|++++.+|..|+||||+|+.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN---~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~ 366 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLH---YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVV 366 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCcee---ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhh
Confidence 4689999999999999999999 778899999999864 468999999999999999999999999999875
Q ss_pred ---------cCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCC
Q 014696 250 ---------WHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNS 294 (420)
Q Consensus 250 ---------~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~ 294 (420)
.++.+++++|+++++. ....+..+.+|++.++..+...++.++
T Consensus 367 ~~ld~~~~~~~~~eVVklLL~~GAD--In~kn~~G~TPLh~y~~~a~n~~~~dI 418 (764)
T PHA02716 367 NILDPETDNDIRLDVIQCLISLGAD--ITAVNCLGYTPLTSYICTAQNYMYYDI 418 (764)
T ss_pred ccccccccccChHHHHHHHHHCCCC--CCCcCCCCCChHHHHHHHHHhcChHHH
Confidence 3688999999999876 233578899999865555555444333
No 17
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=3.4e-32 Score=268.70 Aligned_cols=252 Identities=17% Similarity=0.124 Sum_probs=199.1
Q ss_pred cccccCccc--CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcC--cHHHHHHHHHcCCCCCC
Q 014696 4 LSIVGNSFG--CSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQG--HHEIVSLLIESGVDINL 79 (420)
Q Consensus 4 l~~~g~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g--~~~iv~~Ll~~g~~v~~ 79 (420)
|...|.+.- ...+.||||.|++.|+.++|++|+++|++++..+. .|+||||+|+..+ ..+++++|+++|++++.
T Consensus 58 Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~--~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~ 135 (446)
T PHA02946 58 LLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDK--QHKTPLYYLSGTDDEVIERINLLVQYGAKINN 135 (446)
T ss_pred HHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC--CCCCHHHHHHHcCCchHHHHHHHHHcCCCccc
Confidence 334444432 23667899999999999999999999999886544 5689999999876 48999999999999995
Q ss_pred -ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC--CHHHHHHHHHhcCCCChhhHHHHhhhc
Q 014696 80 -RNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG--HSRCIRLLLADYIPSVPNAWNRLRKKS 156 (420)
Q Consensus 80 -~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 156 (420)
.|..|.|||| |+..|+.+++++|+++|++++..+. .|+||||+|+..+ +.+++++|++++...
T Consensus 136 ~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~-~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadi------------ 201 (446)
T PHA02946 136 SVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDK-FGKNHIHRHLMSDNPKASTISWMMKLGISP------------ 201 (446)
T ss_pred ccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCC-CCCCHHHHHHHhcCCCHHHHHHHHHcCCCC------------
Confidence 6889999997 6678999999999999999999997 9999999998755 468999999875432
Q ss_pred cCCCCchhcccccchhhHHHH-HHhcC--CHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCC-HHHHHHHHHhCCC
Q 014696 157 NKTGSILEFDERYFHLEVLLH-LTLNG--HVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGN-AQCCQILIAMGAS 232 (420)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~-aa~~g--~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~-~~iv~~Ll~~gad 232 (420)
+..+..+.+++| |+..+ +.+++++|+. |++++ .+|..|.||||+|++.++ .+++++|+++|++
T Consensus 202 ---------n~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin---~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~ 268 (446)
T PHA02946 202 ---------SKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVN---KQNKFGDSPLTLLIKTLSPAHLINKLLSTSNV 268 (446)
T ss_pred ---------cccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCC---CCCCCCCCHHHHHHHhCChHHHHHHHHhCCCC
Confidence 223334445555 46665 8899999985 89999 778899999999999988 5899999999875
Q ss_pred cc--------------------cc-ccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCC
Q 014696 233 LT--------------------AE-NANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGW 291 (420)
Q Consensus 233 ~~--------------------~~-d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~ 291 (420)
.+ .. +..|.||||+|+.+|+.+++++|++++.. +.+|+ .+|...|+
T Consensus 269 ~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~~---------~~t~L----~~A~~~~~ 335 (446)
T PHA02946 269 ITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDII---------CEDAM----YYAVLSEY 335 (446)
T ss_pred CCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCCc---------cccHH----HHHHHhCH
Confidence 42 11 13577999999999999999999987642 34454 45556666
Q ss_pred CCCCCC
Q 014696 292 RNSDSL 297 (420)
Q Consensus 292 ~~~~~~ 297 (420)
.+++.+
T Consensus 336 ~~~v~~ 341 (446)
T PHA02946 336 ETMVDY 341 (446)
T ss_pred HHHHHH
Confidence 555544
No 18
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.5e-32 Score=282.99 Aligned_cols=260 Identities=20% Similarity=0.215 Sum_probs=174.0
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHH-----------------------------------
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSA----------------------------------- 59 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa----------------------------------- 59 (420)
.+.++||.|+..|+.++|+.|++.+|.... ..+..|+||||+|+
T Consensus 40 ~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~-~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 118 (682)
T PHA02876 40 IPFTAIHQALQLRQIDIVEEIIQQNPELIY-ITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLD 118 (682)
T ss_pred ccchHHHHHHHHHhhhHHHHHHHhCcccch-hhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHH
Confidence 467999999999999999999999988543 33456789999665
Q ss_pred -----------------------------------HcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHH
Q 014696 60 -----------------------------------AQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLI 104 (420)
Q Consensus 60 -----------------------------------~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll 104 (420)
..|+.+++++|++.|+++|.+|..|.||||+|+..|+.++|++|+
T Consensus 119 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL 198 (682)
T PHA02876 119 EACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLL 198 (682)
T ss_pred HHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 567899999999999999999999999999999999999999999
Q ss_pred HcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCC--------CC---------------
Q 014696 105 LYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKT--------GS--------------- 161 (420)
Q Consensus 105 ~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~--------~~--------------- 161 (420)
++|++++..+. .|.||||+|+..|+.+++++|++.+.................. ..
T Consensus 199 ~~Gad~n~~~~-~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpL 277 (682)
T PHA02876 199 SYGADVNIIAL-DDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPL 277 (682)
T ss_pred HCCCCcCccCC-CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 99999999886 8999999999999999999999766543221111000000000 00
Q ss_pred -------------------chhcccccchhhH-HHHHHhcC-CHHHHHHHHHcCCCcccccccCCCCccHHHHHHHc-CC
Q 014696 162 -------------------ILEFDERYFHLEV-LLHLTLNG-HVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACG-GN 219 (420)
Q Consensus 162 -------------------~~~~~~~~~~~~~-~l~aa~~g-~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~-g~ 219 (420)
..+.+..+..+.+ ++.|+..| +.+++++|+..|++++ ..+..|.||||+|+.. ++
T Consensus 278 h~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin---~~d~~g~TpLh~A~~~~~~ 354 (682)
T PHA02876 278 HHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN---AADRLYITPLHQASTLDRN 354 (682)
T ss_pred HHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCC---CcccCCCcHHHHHHHhCCc
Confidence 0001111112222 22234444 3555555555555555 4445555555555553 34
Q ss_pred HHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 220 AQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 220 ~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++... ..+..+.+|++.
T Consensus 355 ~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~--~~~~~g~T~Lh~ 414 (682)
T PHA02876 355 KDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE--ALSQKIGTALHF 414 (682)
T ss_pred HHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCCchHHH
Confidence 556666666666666666666666666666666666666666655422 123344455543
No 19
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=4.9e-32 Score=272.59 Aligned_cols=241 Identities=18% Similarity=0.208 Sum_probs=181.2
Q ss_pred HHHHHHH--HcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHc-----CcHHHHHHHHHcCCCCCCccCCCCCHHHH
Q 014696 18 ERLVSAA--RDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQ-----GHHEIVSLLIESGVDINLRNYRGQTALMQ 90 (420)
Q Consensus 18 ~~L~~Aa--~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~-----g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~ 90 (420)
+.++.+. ..++.++|++|+++|++++..+ ..|.||||.|+.+ ++.+++++|+++|+|+|.+|..|+||||+
T Consensus 38 ~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d--~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~ 115 (489)
T PHA02798 38 SIFQKYLQRDSPSTDIVKLFINLGANVNGLD--NEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYC 115 (489)
T ss_pred hHHHHHHhCCCCCHHHHHHHHHCCCCCCCCC--CCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHH
Confidence 4444333 3457899999999998887655 4458999988764 67899999999999999999999999999
Q ss_pred HHHcC---cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC---HHHHHHHHHhcCCCChh----hHHHHhhhc----
Q 014696 91 ACQHG---HWEVVLTLILYKANIHRADYLNGGTALHLAALNGH---SRCIRLLLADYIPSVPN----AWNRLRKKS---- 156 (420)
Q Consensus 91 A~~~g---~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~---~~iv~~Ll~~~~~~~~~----~~~~~~~~~---- 156 (420)
|+..+ +.+++++|+++|++++..+. .|.||||+|+..|+ .+++++|+++|...... ....+....
T Consensus 116 a~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~ 194 (489)
T PHA02798 116 LLSNGYINNLEILLFMIENGADTTLLDK-DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNI 194 (489)
T ss_pred HHHcCCcChHHHHHHHHHcCCCccccCC-CCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhcc
Confidence 98875 67899999999999988886 89999999998887 89999999887654321 111111000
Q ss_pred cCC---------CCchhccccc-chhhHHH-------HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCC
Q 014696 157 NKT---------GSILEFDERY-FHLEVLL-------HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGN 219 (420)
Q Consensus 157 ~~~---------~~~~~~~~~~-~~~~~~l-------~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~ 219 (420)
... ......+..+ .+..+++ .+...++.+++++|+. ++|+| .+|..|.||||+|+..|+
T Consensus 195 ~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN---~~d~~G~TPL~~A~~~~~ 270 (489)
T PHA02798 195 DRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDIN---QVDELGFNPLYYSVSHNN 270 (489)
T ss_pred ccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCC---CcCcCCccHHHHHHHcCc
Confidence 000 0000011111 1122222 1245567888888766 68998 778899999999999999
Q ss_pred HHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 220 AQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 220 ~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.+++++|+++|||++.+|..|+|||++|+.+++.++++.|++.+..
T Consensus 271 ~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~ 316 (489)
T PHA02798 271 RKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPN 316 (489)
T ss_pred HHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999999999988665
No 20
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=3.4e-32 Score=266.61 Aligned_cols=261 Identities=26% Similarity=0.341 Sum_probs=207.5
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
+.++++||.|+.....+.++.|++.+++....+... .+|+|+|+..|+.+.++.|+++|+|+|..|..|.||||.|+.
T Consensus 86 ~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~--~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~ 163 (929)
T KOG0510|consen 86 SADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNK--NAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAAR 163 (929)
T ss_pred cccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhc--cCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHh
Confidence 466789999999999999999999999988776655 899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
+++.|..+.|++.|+++...+. +|++|+|.|+++|..++.+.++.+.. .......+-.+.++.
T Consensus 164 ~~~~E~~k~Li~~~a~~~K~~~-~~~~~iH~aa~s~s~e~mEi~l~~~g----------------~~r~~~in~~~n~~~ 226 (929)
T KOG0510|consen 164 KNKVEAKKELINKGADPCKSDI-DGNFPIHEAARSGSKECMEIFLPEHG----------------YERQTHINFDNNEKA 226 (929)
T ss_pred cChHHHHHHHHhcCCCCCcccC-cCCchHHHHHHhcchhhhhhhhcccc----------------chhhcccccccCCCC
Confidence 9999998999999999998886 99999999999999999999996210 111122223333444
Q ss_pred HHHHH-HhcCCHHHHHHHHHcCCCcccc------------cccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 014696 174 VLLHL-TLNGHVESVQLLLDLGASVSEY------------LSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANG 240 (420)
Q Consensus 174 ~~l~a-a~~g~~~~v~~Ll~~ga~~~~~------------~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G 240 (420)
+++|. +..|++++++.+|++|+..... +..|++|.||||+|++.|+++.++.|+..|++++.++.++
T Consensus 227 ~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~ 306 (929)
T KOG0510|consen 227 TPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDE 306 (929)
T ss_pred cchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCC
Confidence 55554 7888888888888877655422 3567788888888888888888888888888888888888
Q ss_pred CCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCCC
Q 014696 241 WTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDSL 297 (420)
Q Consensus 241 ~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~~ 297 (420)
.||||.|+.+|+.+.++-|++..+.......+-.+.+|+ +.|...|++.++++
T Consensus 307 ~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpL----Hlaa~~gH~~v~ql 359 (929)
T KOG0510|consen 307 ESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPL----HLAAKSGHDRVVQL 359 (929)
T ss_pred CCchHHHHHcccHHHHHHHHhCcCccccccccccCCCch----hhhhhcCHHHHHHH
Confidence 888888888888888888777444444444455666665 34556666666554
No 21
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.98 E-value=8.3e-31 Score=258.78 Aligned_cols=193 Identities=20% Similarity=0.170 Sum_probs=173.6
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
.+++||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+. .+.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~~~t~L~~A~~~g~ 80 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYP-DIESELHDAVEEGD 80 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCC-CcccHHHHHHHCCC
Confidence 37899999999999999999999999999999999999999999999999999999999988765 89999999999999
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS 210 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp 210 (420)
.+++++|++.+..... .....+.++++.|+..|+.+++++|+++|++++ ..+..|.||
T Consensus 81 ~~~v~~Ll~~~~~~~~-------------------~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~---~~~~~g~tp 138 (413)
T PHA02875 81 VKAVEELLDLGKFADD-------------------VFYKDGMTPLHLATILKKLDIMKLLIARGADPD---IPNTDKFSP 138 (413)
T ss_pred HHHHHHHHHcCCcccc-------------------cccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC---CCCCCCCCH
Confidence 9999999986432110 011123455666699999999999999999999 678899999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCc
Q 014696 211 LHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGR 266 (420)
Q Consensus 211 Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~ 266 (420)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.++..
T Consensus 139 Lh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~ 194 (413)
T PHA02875 139 LHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194 (413)
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998873
No 22
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.98 E-value=6.8e-32 Score=259.88 Aligned_cols=208 Identities=31% Similarity=0.401 Sum_probs=183.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHh-CCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHHc
Q 014696 17 GERLVSAARDGDLQEAKALLEY-NPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN-YRGQTALMQACQH 94 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d-~~g~TpL~~A~~~ 94 (420)
...++.|+++|+++.|+.|++. +.+++..+. .|-|+||+||.+++++++++|+++|+++|..+ .-+.||||+|+++
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~--~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~ 122 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDR--EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCc--CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc
Confidence 3569999999999999999999 666655554 56899999999999999999999999999998 6689999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc-hhh
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF-HLE 173 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 173 (420)
|+..+|++|+++||+++.+|. +|.||||+|+..|+.-+|-+|+.++ .+.+..+. +.+
T Consensus 123 G~~~vv~lLlqhGAdpt~~D~-~G~~~lHla~~~~~~~~vayll~~~---------------------~d~d~~D~~grT 180 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTLKDK-QGLTPLHLAAQFGHTALVAYLLSKG---------------------ADIDLRDNNGRT 180 (600)
T ss_pred CcHHHHHHHHHcCCCCceecC-CCCcHHHHHHHhCchHHHHHHHHhc---------------------ccCCCcCCCCCC
Confidence 999999999999999999997 9999999999999999999999774 23333444 445
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 250 (420)
+++.||.+|+...+..||+.|+.++. ..+..|.||||+|+..|+..++++|++.|++.+..|.+|+||+.+|.+.
T Consensus 181 pLmwAaykg~~~~v~~LL~f~a~~~~--~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 181 PLMWAAYKGFALFVRRLLKFGASLLL--TDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHHHHHhcccHHHHHHHHhcccccc--cccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 55566999998889999999999994 3348999999999999999999977788899999999999999999877
No 23
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.8e-30 Score=261.17 Aligned_cols=226 Identities=17% Similarity=0.153 Sum_probs=160.5
Q ss_pred CHHHHHHHHHhCCCcccccCCCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc-----CcHHHH
Q 014696 28 DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAA--QGHHEIVSLLIESGVDINLRNYRGQTALMQACQH-----GHWEVV 100 (420)
Q Consensus 28 ~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~--~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~-----g~~~iv 100 (420)
+++.|+.|++.+. .+.. ..|.|+++.+.. .++.++|++|+++|+++|..|..|.||||.|+.+ ++.+++
T Consensus 17 ~~~~v~~ll~~~~-~~~~---~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv 92 (489)
T PHA02798 17 KLSTVKLLIKSCN-PNEI---VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIV 92 (489)
T ss_pred cHHHHHHHHhcCC-hhhh---cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence 5789999998653 3322 234677774444 4589999999999999999999999999999864 678999
Q ss_pred HHHHHcCCCCCccccCCCChHHHHHHHcC---CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH
Q 014696 101 LTLILYKANIHRADYLNGGTALHLAALNG---HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH 177 (420)
Q Consensus 101 ~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 177 (420)
++|+++|++++..+. .|.||||+|+.++ +.+++++|+++|+.... .+..+.+++|
T Consensus 93 ~~Ll~~GadiN~~d~-~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~---------------------~d~~g~tpL~ 150 (489)
T PHA02798 93 KILIENGADINKKNS-DGETPLYCLLSNGYINNLEILLFMIENGADTTL---------------------LDKDGFTMLQ 150 (489)
T ss_pred HHHHHCCCCCCCCCC-CcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc---------------------cCCCCCcHHH
Confidence 999999999999997 8999999999886 78999999998754321 1112222222
Q ss_pred -HHhc---CCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHc----CCHHHHHHHHHhC-------------------
Q 014696 178 -LTLN---GHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACG----GNAQCCQILIAMG------------------- 230 (420)
Q Consensus 178 -aa~~---g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~----g~~~iv~~Ll~~g------------------- 230 (420)
++.. .+.+++++|+++|++++. ..+..|.||||.++.. ++.+++++|+++|
T Consensus 151 ~a~~~~~~~~~~vv~~Ll~~gadin~--~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~ 228 (489)
T PHA02798 151 VYLQSNHHIDIEIIKLLLEKGVDINT--HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLN 228 (489)
T ss_pred HHHHcCCcchHHHHHHHHHhCCCccc--ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHH
Confidence 2222 135555555555555542 1122345555544432 2444555544444
Q ss_pred --------------------CCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHH
Q 014696 231 --------------------ASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIV 283 (420)
Q Consensus 231 --------------------ad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l 283 (420)
+|+|.+|..|+||||+|+.+|+.+++++|++.++.. ...+..+.+|++.++
T Consensus 229 ~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdi--n~~d~~G~TpL~~A~ 299 (489)
T PHA02798 229 SLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDI--NIITELGNTCLFTAF 299 (489)
T ss_pred HHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcc--cccCCCCCcHHHHHH
Confidence 566778889999999999999999999999998872 335778888886543
No 24
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=262.35 Aligned_cols=229 Identities=22% Similarity=0.226 Sum_probs=187.5
Q ss_pred ccccccCcc--cCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHH---------------
Q 014696 3 FLSIVGNSF--GCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHE--------------- 65 (420)
Q Consensus 3 ~l~~~g~~~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~--------------- 65 (420)
+|...|.+. ....+.+|||.|+..|+.+.++.|++.+..... ..+.++|+.|+..|+.+
T Consensus 55 ~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~ 130 (477)
T PHA02878 55 SLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV----FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQT 130 (477)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc----ccchhhHHHHHHcCCHHHHHHHHhCcccCccc
Confidence 444445433 234667999999999999999999998755433 34578999999887754
Q ss_pred ------------------HHHHHHHcCCCCCCccCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 66 ------------------IVSLLIESGVDINLRNYR-GQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 66 ------------------iv~~Ll~~g~~v~~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~-~g~tpLh~A~ 209 (477)
T PHA02878 131 IDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDK-TNNSPLHHAV 209 (477)
T ss_pred CcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHH
Confidence 666777789999999998 99999999999999999999999999999886 9999999999
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH-HHh-cCCHHHHHHHHHcCCCcccccccC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH-LTL-NGHVESVQLLLDLGASVSEYLSVS 204 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-aa~-~g~~~~v~~Ll~~ga~~~~~~~~~ 204 (420)
..|+.+++++|++.+... +..+..+.+++| |+. .++.+++++|+++|++++ ..+
T Consensus 210 ~~~~~~iv~~Ll~~ga~i---------------------n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn---~~~ 265 (477)
T PHA02878 210 KHYNKPIVHILLENGAST---------------------DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN---AKS 265 (477)
T ss_pred HhCCHHHHHHHHHcCCCC---------------------CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC---ccC
Confidence 999999999999875432 222233444554 554 479999999999999999 444
Q ss_pred C-CCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcC-chhHHHHhhhC
Q 014696 205 G-AGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWH-RTGLEDILSTQ 262 (420)
Q Consensus 205 ~-~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g-~~~i~~lL~~~ 262 (420)
. .|.||||+| .++.+++++|+++|+|+|..|..|+||||+|+..+ ..++.++|..+
T Consensus 266 ~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~ 323 (477)
T PHA02878 266 YILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323 (477)
T ss_pred CCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHH
Confidence 4 799999999 57899999999999999999999999999999754 55777777654
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=255.58 Aligned_cols=265 Identities=22% Similarity=0.233 Sum_probs=220.2
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
...++|.|+..|+.+.++.|++++.+++..++. |.||||.|+.+++.|..+.|++.|+++-..|.+|.+|+|.|++.|
T Consensus 121 ~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~--~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~ 198 (929)
T KOG0510|consen 121 KNAPLHLAADSGNYSCLKLLLDYGADVNLEDEN--GFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSG 198 (929)
T ss_pred ccCchhhccccchHHHHHHHHHhcCCccccccC--CCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhc
Confidence 346899999999999999999999888776654 489999999999999889999999999999999999999999999
Q ss_pred cHHHHHHHHH-----cCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc-cc
Q 014696 96 HWEVVLTLIL-----YKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE-RY 169 (420)
Q Consensus 96 ~~~iv~~Ll~-----~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 169 (420)
..|+.+..+. .+..++..++ .|.||||.|+..|+.++++..++++........+..... ....+. +.
T Consensus 199 s~e~mEi~l~~~g~~r~~~in~~~n-~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~------kelv~~~d~ 271 (929)
T KOG0510|consen 199 SKECMEIFLPEHGYERQTHINFDNN-EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQE------KELVNDEDN 271 (929)
T ss_pred chhhhhhhhccccchhhcccccccC-CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHH------HHHhhcccc
Confidence 9999999998 6778888886 999999999999999999999998876655543322111 111222 33
Q ss_pred chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHH-hC-CCccccccCCCCHHHHH
Q 014696 170 FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIA-MG-ASLTAENANGWTPLMVA 247 (420)
Q Consensus 170 ~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~-~g-ad~~~~d~~G~TpL~~A 247 (420)
.+.++++.|++.|+.++++.|+..|++++ .++.++.||||.||..|+.+.|+.||+ .| ...|..|..|.||||+|
T Consensus 272 dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~---~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 272 DGCTPLHYAARQGGPESVDNLLGFGASIN---SKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred cCCchHHHHHHcCChhHHHHHHHcCCccc---ccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 34444555699999999999999999999 778999999999999999999999999 54 66788999999999999
Q ss_pred HHcCchhHHHHhhhCCCCcccc-CCCCCCCchHHHHHHHHHHcCCCCCCC
Q 014696 248 RSWHRTGLEDILSTQPEGRLEV-LPSPYLALPLMSIVKIARECGWRNSDS 296 (420)
Q Consensus 248 ~~~g~~~i~~lL~~~~~~~~~~-~~~~~~~~pl~~~l~~a~~~g~~~~~~ 296 (420)
++.||..++++|+..++..... ..+..+.+++ +.|..+|....+.
T Consensus 349 a~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaL----H~Aa~~g~~~av~ 394 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFLNMSEADSDGNTAL----HLAAKYGNTSAVQ 394 (929)
T ss_pred hhcCHHHHHHHHHhcChhhhcccccccCCchhh----hHHHHhccHHHHH
Confidence 9999999999999999986631 1256666555 4555566554443
No 26
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=3.7e-30 Score=229.28 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=151.3
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcC--cHHHHHHHHHcCCCCCCcc-CCCCCHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQG--HHEIVSLLIESGVDINLRN-YRGQTALMQA 91 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g--~~~iv~~Ll~~g~~v~~~d-~~g~TpL~~A 91 (420)
...+||+.|++.|+.+.|+.|++.. +. .+..|.||||+|+..+ +.+++++|+++|++++.++ ..|+||||+|
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~~---n~--~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a 94 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKFV---ND--CNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY 94 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHhh---hc--cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence 3458999999999999999999753 22 2345689999999854 8999999999999999997 4899999998
Q ss_pred HHc---CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc
Q 014696 92 CQH---GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER 168 (420)
Q Consensus 92 ~~~---g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
+.. ++.+++++|+++|++++..+. .|.||||+|+...
T Consensus 95 ~~~~~~~~~eiv~~Ll~~gadin~~d~-~G~TpLh~a~~~~--------------------------------------- 134 (209)
T PHA02859 95 LSFNKNVEPEILKILIDSGSSITEEDE-DGKNLLHMYMCNF--------------------------------------- 134 (209)
T ss_pred HHhCccccHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhc---------------------------------------
Confidence 764 479999999999999999987 9999999987531
Q ss_pred cchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHH-HHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 169 YFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHY-AACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 169 ~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~-Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
.++.+++++|+++|++++ .+|..|.||||. |+..++.+++++|+++|++++.+|..|+|||++|
T Consensus 135 ------------~~~~~iv~~Li~~gadin---~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la 199 (209)
T PHA02859 135 ------------NVRINVIKLLIDSGVSFL---NKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLI 199 (209)
T ss_pred ------------cCCHHHHHHHHHcCCCcc---cccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 134566777778899998 778899999995 5678899999999999999999999999999999
Q ss_pred HHcC
Q 014696 248 RSWH 251 (420)
Q Consensus 248 ~~~g 251 (420)
+.++
T Consensus 200 ~~~~ 203 (209)
T PHA02859 200 KFRN 203 (209)
T ss_pred hhhh
Confidence 8754
No 27
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=8.3e-31 Score=213.94 Aligned_cols=190 Identities=29% Similarity=0.324 Sum_probs=166.6
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCC-CCCCccC-CCCCHHHHHHHcCcHHHHHHHH-HcCCCCCccccCCCChHHHHHHHc
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGV-DINLRNY-RGQTALMQACQHGHWEVVLTLI-LYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~-~v~~~d~-~g~TpL~~A~~~g~~~iv~~Ll-~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.++.+.++......-++-|++... .++.++. +|+||||+|+..|+.++|.+|+ +.+..++.+|+ .|+||||+|+..
T Consensus 4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDd-aGWtPlhia~s~ 82 (226)
T KOG4412|consen 4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDD-AGWTPLHIAASN 82 (226)
T ss_pred cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccc-cCCchhhhhhhc
Confidence 578888888888888888888755 5677766 8999999999999999999999 56888888887 999999999999
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH-HHHhcCCHHHHHHHHHcCCCcccccccCCCC
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL-HLTLNGHVESVQLLLDLGASVSEYLSVSGAG 207 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g 207 (420)
|+.++|+.|+... ..+.+....++.+.+ +|+..|..+++++|+++|+.++ .+|..|
T Consensus 83 g~~evVk~Ll~r~--------------------~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~---~kD~~~ 139 (226)
T KOG4412|consen 83 GNDEVVKELLNRS--------------------GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR---IKDKQG 139 (226)
T ss_pred CcHHHHHHHhcCC--------------------CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc---cccccc
Confidence 9999999999541 233344444555555 4599999999999999999999 789999
Q ss_pred ccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 208 STSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 208 ~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.||||-|+.-|+++++++|+..|+.+|..|+.|+||||.|.-.|+.++..+|.++++.
T Consensus 140 qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd 197 (226)
T KOG4412|consen 140 QTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGAD 197 (226)
T ss_pred CchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999889999999999999876
No 28
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.1e-29 Score=255.95 Aligned_cols=239 Identities=21% Similarity=0.206 Sum_probs=176.1
Q ss_pred HcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHc--CcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC------c
Q 014696 25 RDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQ--GHHEIVSLLIESGVDINLRNYRGQTALMQACQHG------H 96 (420)
Q Consensus 25 ~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~--g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g------~ 96 (420)
...+.++|+.|+++|++++.. . .|.||||.++.. ++.++|++|+++|+++|.++ .+.||||.|+.++ +
T Consensus 12 ~~~~~~~v~~LL~~GadvN~~-~--~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~ 87 (494)
T PHA02989 12 DTVDKNALEFLLRTGFDVNEE-Y--RGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKI 87 (494)
T ss_pred CcCcHHHHHHHHHcCCCcccc-c--CCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhH
Confidence 357899999999999998875 2 357998866554 47899999999999999887 5799999998754 5
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHc---CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALN---GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.+++++|+++|++++..+. .|.||||.|+.. |+.+++++|+++|+... +..+..+.
T Consensus 88 ~~iv~~Ll~~Gadin~~d~-~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin--------------------~~~d~~g~ 146 (494)
T PHA02989 88 KKIVKLLLKFGADINLKTF-NGVSPIVCFIYNSNINNCDMLRFLLSKGINVN--------------------DVKNSRGY 146 (494)
T ss_pred HHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc--------------------cccCCCCC
Confidence 7899999999999999986 899999988765 68999999999865441 11222233
Q ss_pred HHHHH-H--hcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcC----CHHHHHHHHHhCCCc-------------
Q 014696 174 VLLHL-T--LNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGG----NAQCCQILIAMGASL------------- 233 (420)
Q Consensus 174 ~~l~a-a--~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g----~~~iv~~Ll~~gad~------------- 233 (420)
+++|. + ..++.+++++|+++|++++. ..+..|.||||+|++.+ +.+++++|+++|+++
T Consensus 147 tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~--~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~ 224 (494)
T PHA02989 147 NLLHMYLESFSVKKDVIKILLSFGVNLFE--KTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLES 224 (494)
T ss_pred CHHHHHHHhccCCHHHHHHHHHcCCCccc--cccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHH
Confidence 44443 2 23466666666666666662 13455666666665543 566666666666554
Q ss_pred -------------------------cccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHH
Q 014696 234 -------------------------TAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARE 288 (420)
Q Consensus 234 -------------------------~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~ 288 (420)
|.+|..|+||||+|+..|+.+++++|++.++.. ...+..+.+|++. |..
T Consensus 225 ~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi--n~~d~~G~TpL~~----A~~ 298 (494)
T PHA02989 225 FLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI--YNVSKDGDTVLTY----AIK 298 (494)
T ss_pred HHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc--cccCCCCCCHHHH----HHH
Confidence 555677999999999999999999999998863 3346778888754 445
Q ss_pred cCCCCCCC
Q 014696 289 CGWRNSDS 296 (420)
Q Consensus 289 ~g~~~~~~ 296 (420)
.|..+++.
T Consensus 299 ~~~~~iv~ 306 (494)
T PHA02989 299 HGNIDMLN 306 (494)
T ss_pred cCCHHHHH
Confidence 55555443
No 29
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=8e-31 Score=242.67 Aligned_cols=190 Identities=32% Similarity=0.408 Sum_probs=136.4
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHh-CCCc------ccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEY-NPRL------VRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTA 87 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~------~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~Tp 87 (420)
.+++||..||++|+.++|++|+++ +++. ......-.|-+||..|+..||+++|+.|+++|+++|.......||
T Consensus 41 ~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStP 120 (615)
T KOG0508|consen 41 NGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTP 120 (615)
T ss_pred CCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCcc
Confidence 445677777777777777777763 2221 111111235567777777777777777777777777666666677
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc
Q 014696 88 LMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE 167 (420)
Q Consensus 88 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
|..||.-|+.++|++|+++|+|++..+. .|.|.||+|+.+||.+|+++|
T Consensus 121 LraACfDG~leivKyLvE~gad~~Ianr-hGhTcLmIa~ykGh~~I~qyL------------------------------ 169 (615)
T KOG0508|consen 121 LRAACFDGHLEIVKYLVEHGADPEIANR-HGHTCLMIACYKGHVDIAQYL------------------------------ 169 (615)
T ss_pred HHHHHhcchhHHHHHHHHcCCCCccccc-CCCeeEEeeeccCchHHHHHH------------------------------
Confidence 7777777777777777777777777665 777777777766666655555
Q ss_pred ccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 168 RYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 168 ~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
++.|+|+| .++..|.|+||.+++.|++|++|+|+.+|+.++ +|..|.|||..|
T Consensus 170 -----------------------le~gADvn---~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~A 222 (615)
T KOG0508|consen 170 -----------------------LEQGADVN---AKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLA 222 (615)
T ss_pred -----------------------HHhCCCcc---hhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHH
Confidence 56788888 677889999999999999999999999988876 666799999999
Q ss_pred HHcCchhHHHHhhhC
Q 014696 248 RSWHRTGLEDILSTQ 262 (420)
Q Consensus 248 ~~~g~~~i~~lL~~~ 262 (420)
+..|+.+++++|++.
T Consensus 223 a~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 223 AVTGHTDIVERLLQC 237 (615)
T ss_pred hhhcchHHHHHHhcC
Confidence 999999999888853
No 30
>PHA02917 ankyrin-like protein; Provisional
Probab=99.97 E-value=4.5e-29 Score=255.80 Aligned_cols=260 Identities=19% Similarity=0.136 Sum_probs=191.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHH--HcCcHHHHHHHHHcCCCCCCccC---CC--------
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSA--AQGHHEIVSLLIESGVDINLRNY---RG-------- 84 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa--~~g~~~iv~~Ll~~g~~v~~~d~---~g-------- 84 (420)
.+++.|+..|+.++|+.|+++|++++..+. .|+||||+|+ ..|+.+++++|+++|++++..|. .|
T Consensus 105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~--~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~ 182 (661)
T PHA02917 105 IFSYMKSKNVDVDLIKVLVEHGFDLSVKCE--NHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQP 182 (661)
T ss_pred hHHHHHhhcCCHHHHHHHHHcCCCCCccCC--CCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccc
Confidence 567788999999999999999999987655 4589999654 57899999999999999986653 34
Q ss_pred ---CCHHHHHHH-----------cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCH--HHHHHHHHhcCCCC---
Q 014696 85 ---QTALMQACQ-----------HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHS--RCIRLLLADYIPSV--- 145 (420)
Q Consensus 85 ---~TpL~~A~~-----------~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~--~iv~~Ll~~~~~~~--- 145 (420)
.||||+|+. +++.++|++|+++|++++..+. .|.||||+|+.+|+. ++|++|++ +....
T Consensus 183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~-~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~ 260 (661)
T PHA02917 183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDK-NYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYS 260 (661)
T ss_pred cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCC-CCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccc
Confidence 599999986 5689999999999999999987 999999999999985 79999985 43221
Q ss_pred ----h-----hhHHH-Hhhh--cc------------CCCCchh-----cc--cc----------cchhhHH----HHHHh
Q 014696 146 ----P-----NAWNR-LRKK--SN------------KTGSILE-----FD--ER----------YFHLEVL----LHLTL 180 (420)
Q Consensus 146 ----~-----~~~~~-~~~~--~~------------~~~~~~~-----~~--~~----------~~~~~~~----l~aa~ 180 (420)
+ ..... +... .. ..+.... .+ .. ..+..++ +.++.
T Consensus 261 ~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 340 (661)
T PHA02917 261 YIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMT 340 (661)
T ss_pred cccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHH
Confidence 0 00111 0000 00 0000000 00 00 1111222 22344
Q ss_pred cCC--HHHHHHHHHcCCCcccc---------------------------cccCCCCccHHHHHHHcC-------------
Q 014696 181 NGH--VESVQLLLDLGASVSEY---------------------------LSVSGAGSTSLHYAACGG------------- 218 (420)
Q Consensus 181 ~g~--~~~v~~Ll~~ga~~~~~---------------------------~~~~~~g~TpLh~Aa~~g------------- 218 (420)
.|. .+++++|+++||+++.. ...+..|.||||.|++.+
T Consensus 341 ~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~ 420 (661)
T PHA02917 341 FGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKK 420 (661)
T ss_pred cCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhh
Confidence 665 56999999999988733 123446999999987543
Q ss_pred ----------CHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHH
Q 014696 219 ----------NAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIV 283 (420)
Q Consensus 219 ----------~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l 283 (420)
..+++++|+++|||+|.+|..|+||||+|+..++.+++++|++.++.. ...+..+.+|+..+.
T Consensus 421 ~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdi--n~~d~~G~T~L~~A~ 493 (661)
T PHA02917 421 GLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDV--NIRSNNGYTCIAIAI 493 (661)
T ss_pred ccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCC--CCCCCCCCCHHHHHH
Confidence 356789999999999999999999999999999999999999998873 235677888876543
No 31
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=6.8e-30 Score=236.55 Aligned_cols=126 Identities=32% Similarity=0.466 Sum_probs=113.4
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+..||..|+..|++++|+.|+++++.+|.....+ .|||-.|+.-||+++||+|+++|+|+++.|+.|.|.||+|+.+
T Consensus 83 egappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN--StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~yk 160 (615)
T KOG0508|consen 83 EGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN--STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYK 160 (615)
T ss_pred CCCchhhHHhccCcHHHHHHHHHhcCccccccccC--CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeecc
Confidence 45568999999999999999999998887665544 5999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCC
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIP 143 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 143 (420)
|+.+|+++|++.|+|+|.++. .|.|+||.++..|+.+++++|+.++..
T Consensus 161 Gh~~I~qyLle~gADvn~ks~-kGNTALH~caEsG~vdivq~Ll~~ga~ 208 (615)
T KOG0508|consen 161 GHVDIAQYLLEQGADVNAKSY-KGNTALHDCAESGSVDIVQLLLKHGAK 208 (615)
T ss_pred CchHHHHHHHHhCCCcchhcc-cCchHHHhhhhcccHHHHHHHHhCCce
Confidence 999999999999999999986 999999999999999999999987653
No 32
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96 E-value=8.9e-29 Score=237.02 Aligned_cols=210 Identities=17% Similarity=0.086 Sum_probs=176.9
Q ss_pred CHHHH-HHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC------CccCCCCCHHHHHHH--cCcHH
Q 014696 28 DLQEA-KALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDIN------LRNYRGQTALMQACQ--HGHWE 98 (420)
Q Consensus 28 ~~~~v-~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~------~~d~~g~TpL~~A~~--~g~~~ 98 (420)
-++++ ++++.++.+++....++ +|+..+..|++++|+.+|++++ .++..++|+||+|+. .|+.+
T Consensus 60 ~~~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~e 132 (437)
T PHA02795 60 PVDVLYDYFRIHRDNIDQYIVDR-------LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEID 132 (437)
T ss_pred HHHHHHHHHHHcCcchhhhhhhh-------HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHH
Confidence 34433 67888888887765544 9999999999999999999999 788899999999999 89999
Q ss_pred HHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH-
Q 014696 99 VVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH- 177 (420)
Q Consensus 99 iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 177 (420)
+|++|+++|++++.. .+.||||.|+..|+.+++++|+++|+....... .......+.++++
T Consensus 133 iV~~LI~~GADIn~~---~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~---------------~~l~~~~~~t~l~~ 194 (437)
T PHA02795 133 IVDFMVDHGAVIYKI---ECLNAYFRGICKKESSVVEFILNCGIPDENDVK---------------LDLYKIIQYTRGFL 194 (437)
T ss_pred HHHHHHHCCCCCCCC---CCCCHHHHHHHcCcHHHHHHHHhcCCccccccc---------------chhhhhhccchhHH
Confidence 999999999999874 468999999999999999999998763321100 0000012224444
Q ss_pred HHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCc-----
Q 014696 178 LTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHR----- 252 (420)
Q Consensus 178 aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~----- 252 (420)
++..++.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+
T Consensus 195 a~~~~~~eIve~LIs~GADIN---~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~ 271 (437)
T PHA02795 195 VDEPTVLEIYKLCIPYIEDIN---QLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARR 271 (437)
T ss_pred HHhcCHHHHHHHHHhCcCCcC---cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCccccc
Confidence 588899999999999999999 788999999999999999999999999999999999999999999999984
Q ss_pred ---hhHHHHhhhCCCC
Q 014696 253 ---TGLEDILSTQPEG 265 (420)
Q Consensus 253 ---~~i~~lL~~~~~~ 265 (420)
.+++++|+++++.
T Consensus 272 ~~~~eIvelLL~~gad 287 (437)
T PHA02795 272 ETHLKILEILLREPLS 287 (437)
T ss_pred ccHHHHHHHHHhCCCC
Confidence 6899999988764
No 33
>PHA02792 ankyrin-like protein; Provisional
Probab=99.96 E-value=3.6e-28 Score=241.01 Aligned_cols=262 Identities=15% Similarity=0.112 Sum_probs=199.9
Q ss_pred CCCHHHH-HHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHH-cCcHHHHHHHHHcCCCCC--------------
Q 014696 15 ASGERLV-SAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAA-QGHHEIVSLLIESGVDIN-------------- 78 (420)
Q Consensus 15 ~~~~~L~-~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~-~g~~~iv~~Ll~~g~~v~-------------- 78 (420)
.+-+.++ .|..+|++|+|+.|+++|++++..... |.||||+|+. .++.|++++|+++|++++
T Consensus 70 ~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~--~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~ 147 (631)
T PHA02792 70 NDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNG--INIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQI 147 (631)
T ss_pred CCccHHHHHHHhcccHHHHHHHHHcCCCcccccCC--CCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhc
Confidence 3444564 566789999999999999999876553 6899999966 699999999999998732
Q ss_pred ----------------------CccCCCCCHHHHHHHcC-------cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 79 ----------------------LRNYRGQTALMQACQHG-------HWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 79 ----------------------~~d~~g~TpL~~A~~~g-------~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
..|..|.||||+|+.++ +.|+++.|+.+|++++..+. .|.||||+|+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~-~g~t~l~~~~~~~ 226 (631)
T PHA02792 148 TRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTY-REHTTLYYYVDKC 226 (631)
T ss_pred ccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCC-CCChHHHHHHHcc
Confidence 34567999999999999 89999999999999999997 8999999999999
Q ss_pred --CHHHHHHHHHhcCCCChhhHHH----Hhhhc-----------------cCC---------------------------
Q 014696 130 --HSRCIRLLLADYIPSVPNAWNR----LRKKS-----------------NKT--------------------------- 159 (420)
Q Consensus 130 --~~~iv~~Ll~~~~~~~~~~~~~----~~~~~-----------------~~~--------------------------- 159 (420)
+.+++++|++....- ...... ++... +..
T Consensus 227 ~i~~ei~~~L~~~~~~~-~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (631)
T PHA02792 227 DIKREIFDALFDSNYSG-NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDS 305 (631)
T ss_pred cchHHHHHHHHhccccc-cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHH
Confidence 889999998642200 000000 00000 000
Q ss_pred -----------------------CCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCC--CccHHHHH
Q 014696 160 -----------------------GSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGA--GSTSLHYA 214 (420)
Q Consensus 160 -----------------------~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~--g~TpLh~A 214 (420)
....... .......++.|+..|+.+++++|+++|++++ .+|.. +.||||+|
T Consensus 306 ~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~-r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN---~kD~~g~~~TpLh~A 381 (631)
T PHA02792 306 IQDLLSEYVSYHTVYINVIKCMIDEGATLY-RFKHINKYFQKFDNRDPKVVEYILKNGNVVV---EDDDNIINIMPLFPT 381 (631)
T ss_pred HHHHHHHHHhcCCccHHHHHHHHHCCCccc-cCCcchHHHHHHHcCCHHHHHHHHHcCCchh---hhcCCCCChhHHHHH
Confidence 0000000 1113334566789999999999999999999 45544 57999998
Q ss_pred HHcCCHH---HHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHH
Q 014696 215 ACGGNAQ---CCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIA 286 (420)
Q Consensus 215 a~~g~~~---iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a 286 (420)
+.....+ ++++|+++|||+|.+|..|+||||+|+..++.+++++|+++++.. ...+..+.+|+..+...+
T Consensus 382 ~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADI--N~kD~~G~TpL~~A~~~~ 454 (631)
T PHA02792 382 LSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADI--NITTKYGSTCIGICVILA 454 (631)
T ss_pred HHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHHHHHHHH
Confidence 8776654 689999999999999999999999999999999999999998762 235778889987765433
No 34
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96 E-value=8.4e-29 Score=238.59 Aligned_cols=205 Identities=28% Similarity=0.262 Sum_probs=180.1
Q ss_pred CcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 52 NSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
..-+..|+++|+++-|+.|++. |.+++..|.+|.|+||+|+.+++.+++++|+++|+++|.....-+.||||||+++|+
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~ 124 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH 124 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence 4678899999999999999999 999999999999999999999999999999999999999987789999999999999
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH-HHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH-LTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
..+|++|+++|+.+. ..+..+..++| |++.|+.-+|-+||.+|+|++ .+|.+|+|
T Consensus 125 ~~vv~lLlqhGAdpt---------------------~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d---~~D~~grT 180 (600)
T KOG0509|consen 125 ISVVDLLLQHGADPT---------------------LKDKQGLTPLHLAAQFGHTALVAYLLSKGADID---LRDNNGRT 180 (600)
T ss_pred HHHHHHHHHcCCCCc---------------------eecCCCCcHHHHHHHhCchHHHHHHHHhcccCC---CcCCCCCC
Confidence 999999999976543 33344445555 499999999999999999999 88999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccc-cCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAEN-ANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d-~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
|||+|+.+|+...++.|++.|++++..| .+|.||||+|+..|+..++.+|++.++. ... .+.-+.+|.+-+
T Consensus 181 pLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~-~d~-~~~~g~tp~~LA 252 (600)
T KOG0509|consen 181 PLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGAD-LDK-TNTNGKTPFDLA 252 (600)
T ss_pred HHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCc-ccc-cccCCCCHHHHH
Confidence 9999999999998999999999999988 8999999999999999999955555444 322 344477777554
No 35
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=6e-28 Score=247.50 Aligned_cols=208 Identities=19% Similarity=0.156 Sum_probs=167.4
Q ss_pred HHHHHHHHHhCCCcccccCCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHH----HHH
Q 014696 29 LQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQ---GHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWE----VVL 101 (420)
Q Consensus 29 ~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~----iv~ 101 (420)
++.|++|+..+...+. .+..|+||||+|+.. |+.++|++|+++|++++..+..|+||||+|+..|+.+ +++
T Consensus 12 ~~~~~~l~~~~~~~~~--~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~ 89 (661)
T PHA02917 12 LDELKQMLRDRDPNDT--RNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAM 89 (661)
T ss_pred HHHHHHHHhccCcccc--cCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHH
Confidence 5788999987765543 345669999997555 8899999999999999999999999999999999854 567
Q ss_pred HHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH-H--
Q 014696 102 TLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH-L-- 178 (420)
Q Consensus 102 ~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-a-- 178 (420)
.|++.+...+..+ ..+++++|+.+|+.++|++|+++|+.. +..+..+.++++ +
T Consensus 90 ~Ll~~~~~~n~~~---~~~~~~~a~~~~~~e~vk~Ll~~Gadi---------------------n~~d~~g~T~L~~~~a 145 (661)
T PHA02917 90 ALLEATGYSNIND---FNIFSYMKSKNVDVDLIKVLVEHGFDL---------------------SVKCENHRSVIENYVM 145 (661)
T ss_pred HHHhccCCCCCCC---cchHHHHHhhcCCHHHHHHHHHcCCCC---------------------CccCCCCccHHHHHHH
Confidence 8888755444433 347788899999999999999875433 333444555554 3
Q ss_pred HhcCCHHHHHHHHHcCCCcccccccCCCC-----------ccHHHHHHH-----------cCCHHHHHHHHHhCCCcccc
Q 014696 179 TLNGHVESVQLLLDLGASVSEYLSVSGAG-----------STSLHYAAC-----------GGNAQCCQILIAMGASLTAE 236 (420)
Q Consensus 179 a~~g~~~~v~~Ll~~ga~~~~~~~~~~~g-----------~TpLh~Aa~-----------~g~~~iv~~Ll~~gad~~~~ 236 (420)
+..|+.+++++|+++|++++.....+..| .||||+|+. .++.++|++|+++|+|+|.+
T Consensus 146 ~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~ 225 (661)
T PHA02917 146 TDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSI 225 (661)
T ss_pred ccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccC
Confidence 46799999999999999998432223334 599999986 46899999999999999999
Q ss_pred ccCCCCHHHHHHHcCch--hHHHHhhhC
Q 014696 237 NANGWTPLMVARSWHRT--GLEDILSTQ 262 (420)
Q Consensus 237 d~~G~TpL~~A~~~g~~--~i~~lL~~~ 262 (420)
|.+|+||||+|++.|+. +++++|++.
T Consensus 226 d~~G~TpLh~A~~~g~~~~eivk~Li~g 253 (661)
T PHA02917 226 DKNYCTALQYYIKSSHIDIDIVKLLMKG 253 (661)
T ss_pred CCCCCcHHHHHHHcCCCcHHHHHHHHhC
Confidence 99999999999999986 799999863
No 36
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.96 E-value=2.6e-29 Score=260.81 Aligned_cols=246 Identities=27% Similarity=0.307 Sum_probs=148.8
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
....++++.|++.|.++.++.++..+...+.. .+.|.||||.|+.+++..+|+.++++|++++..+..|+||+|+|+.
T Consensus 372 ~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~--gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~ 449 (1143)
T KOG4177|consen 372 EKGFTPLHLAVKSGRVSVVELLLEAGADPNSA--GKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAK 449 (1143)
T ss_pred ccCCcchhhhcccCchhHHHhhhhccCCcccC--CCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhh
Confidence 35556788888888888888888888775443 3445788888888888888888888888888888888888888888
Q ss_pred cC-cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHh------------hhccCCC
Q 014696 94 HG-HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLR------------KKSNKTG 160 (420)
Q Consensus 94 ~g-~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~------------~~~~~~~ 160 (420)
.| ..+++..++++|.+++.... .|.||||.|+..||.++++.|++.+..........+. .......
T Consensus 450 ~g~~~~~~~~l~~~g~~~n~~s~-~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~ 528 (1143)
T KOG4177|consen 450 KGRYLQIARLLLQYGADPNAVSK-QGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLE 528 (1143)
T ss_pred cccHhhhhhhHhhcCCCcchhcc-ccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhh
Confidence 88 77888888888888888775 8888888888888888888888764222211111000 0000000
Q ss_pred Cchhcccccc-hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccC
Q 014696 161 SILEFDERYF-HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENAN 239 (420)
Q Consensus 161 ~~~~~~~~~~-~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 239 (420)
.....+.... +.++++.|+..|++++||+||++|+|++ .+++.|+||||.|+..|+.+|+.+|+++||++|..|.+
T Consensus 529 ~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~---ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~ 605 (1143)
T KOG4177|consen 529 HGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN---AKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLD 605 (1143)
T ss_pred cCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc---ccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCccccc
Confidence 0111111111 1222223345555555555555555555 33445555555555555555555555555555555555
Q ss_pred CCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 240 GWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 240 G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
|.|||++|+..|+.+++++|+..+..
T Consensus 606 g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 606 GFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred CcchhHHHHHhcccchhhHHHhccCc
Confidence 55555555555555555555444443
No 37
>PHA02730 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.3e-27 Score=237.74 Aligned_cols=264 Identities=14% Similarity=0.068 Sum_probs=187.7
Q ss_pred CCCCHHHHHHHHcC---CHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcC--cHHHHHHHHHcCCC--CCCccCCCCC
Q 014696 14 SASGERLVSAARDG---DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQG--HHEIVSLLIESGVD--INLRNYRGQT 86 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g---~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g--~~~iv~~Ll~~g~~--v~~~d~~g~T 86 (420)
..+.+|||+|+..| +.++|+.|+++|++++..+ ..|.||||+|+..+ +.|+|++|++.|++ ++..+..+.+
T Consensus 39 ~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD--~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~ 116 (672)
T PHA02730 39 RRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRN--NEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDF 116 (672)
T ss_pred CCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccC--CCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCc
Confidence 35679999999997 5999999999999988654 45699999999977 79999999999654 4777777999
Q ss_pred HHHHHHH--cCcHHHHHHHHH-cCCCCCcccc----CCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHH---------
Q 014696 87 ALMQACQ--HGHWEVVLTLIL-YKANIHRADY----LNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWN--------- 150 (420)
Q Consensus 87 pL~~A~~--~g~~~iv~~Ll~-~ga~~~~~~~----~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~--------- 150 (420)
|||.++. +++.++|++|++ .+.+++...+ ..|.+|+++|...++.++|++|+++|+........
T Consensus 117 ~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c 196 (672)
T PHA02730 117 DLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRC 196 (672)
T ss_pred hHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCcc
Confidence 9999988 999999999997 6778776532 37899999999999999999999998766311100
Q ss_pred -------HHhhh--ccC--------CCCchhcccccchhhHHHHH---HhcCCHHHHHHHHH------------------
Q 014696 151 -------RLRKK--SNK--------TGSILEFDERYFHLEVLLHL---TLNGHVESVQLLLD------------------ 192 (420)
Q Consensus 151 -------~~~~~--~~~--------~~~~~~~~~~~~~~~~~l~a---a~~g~~~~v~~Ll~------------------ 192 (420)
.+... ... .....+.+..+..+.+++|. ...|+.|+|++|++
T Consensus 197 ~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~ 276 (672)
T PHA02730 197 KNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRG 276 (672)
T ss_pred chhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhh
Confidence 00000 000 01112234444455555541 34456777777777
Q ss_pred --------------cCCCcccc-----------------cccCCCCcc---------------------HHHHHHHcC--
Q 014696 193 --------------LGASVSEY-----------------LSVSGAGST---------------------SLHYAACGG-- 218 (420)
Q Consensus 193 --------------~ga~~~~~-----------------~~~~~~g~T---------------------pLh~Aa~~g-- 218 (420)
+|+|.... ...+..|.+ .||.-.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~ 356 (672)
T PHA02730 277 VLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDM 356 (672)
T ss_pred hHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCc
Confidence 56665420 013344433 555555544
Q ss_pred -CHHHHHHHHHhCCCccccccCCCCHHHHHHHcCc----hhHHHHhhhCCCCccccCCCCCCCchHH
Q 014696 219 -NAQCCQILIAMGASLTAENANGWTPLMVARSWHR----TGLEDILSTQPEGRLEVLPSPYLALPLM 280 (420)
Q Consensus 219 -~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~----~~i~~lL~~~~~~~~~~~~~~~~~~pl~ 280 (420)
+.+++++|+++||++|.. ..|+||||+|+..++ .+++++|+++++.......+..+.+|+.
T Consensus 357 v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh 422 (672)
T PHA02730 357 VSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMY 422 (672)
T ss_pred CcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHh
Confidence 577888888888888875 789999999988875 7999999999874212224556778775
No 38
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=7.2e-27 Score=208.10 Aligned_cols=176 Identities=20% Similarity=0.139 Sum_probs=148.9
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC--cHHHHHHHHHcCCCCCccccCCCChHHHHHHH
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG--HWEVVLTLILYKANIHRADYLNGGTALHLAAL 127 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 127 (420)
.+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+.++ +.+++++|+++|++++..+...|.||||+|+.
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence 347999999999999999999985 5678889999999999865 89999999999999999875589999999875
Q ss_pred cCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCC
Q 014696 128 NGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAG 207 (420)
Q Consensus 128 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g 207 (420)
.++ .++.+++++|+++|++++ .++..|
T Consensus 97 ~~~--------------------------------------------------~~~~eiv~~Ll~~gadin---~~d~~G 123 (209)
T PHA02859 97 FNK--------------------------------------------------NVEPEILKILIDSGSSIT---EEDEDG 123 (209)
T ss_pred hCc--------------------------------------------------cccHHHHHHHHHCCCCCC---CcCCCC
Confidence 321 124566777778899999 788999
Q ss_pred ccHHHHHHH--cCCHHHHHHHHHhCCCccccccCCCCHHHH-HHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHH
Q 014696 208 STSLHYAAC--GGNAQCCQILIAMGASLTAENANGWTPLMV-ARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIV 283 (420)
Q Consensus 208 ~TpLh~Aa~--~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~-A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l 283 (420)
.||||+|+. .++.+++++|+++|++++.+|.+|.||||. |+..++.+++++|++.+... ...+..+.+|+..+.
T Consensus 124 ~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi--~~~d~~g~tpl~la~ 200 (209)
T PHA02859 124 KNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDI--NETNKSGYNCYDLIK 200 (209)
T ss_pred CCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHh
Confidence 999999986 468999999999999999999999999995 56788999999999988752 235678888876543
No 39
>PHA02730 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.6e-25 Score=224.49 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=80.6
Q ss_pred hhHHHH-HHhcCC----HHHHHHHHHcCC--CcccccccCCCCccHHHH---HHHcC---------CHHHHHHHHHhCCC
Q 014696 172 LEVLLH-LTLNGH----VESVQLLLDLGA--SVSEYLSVSGAGSTSLHY---AACGG---------NAQCCQILIAMGAS 232 (420)
Q Consensus 172 ~~~~l~-aa~~g~----~~~v~~Ll~~ga--~~~~~~~~~~~g~TpLh~---Aa~~g---------~~~iv~~Ll~~gad 232 (420)
+.+++| |+..++ .+++++|+++|+ +++ .++..|.||||. |...+ ..+++++|+++|+|
T Consensus 378 G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN---~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GAD 454 (672)
T PHA02730 378 NNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN---HVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDD 454 (672)
T ss_pred CCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc---ccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccc
Confidence 445555 666664 899999999998 466 667889999984 33232 23579999999999
Q ss_pred ccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 233 LTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 233 ~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
+|.+|..|+||||+|+..++.+++++|+++++.. .......+.+|++.
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~LI~~GAdI-N~~d~~~g~TaL~~ 502 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRLLEYGASV-NTTSRSIINTAIQK 502 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCcCCcCHHHH
Confidence 9999999999999999999999999999998863 22222246677654
No 40
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=3.4e-27 Score=245.16 Aligned_cols=216 Identities=31% Similarity=0.352 Sum_probs=177.2
Q ss_pred CCCHHHHHHHHcC-CHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDG-DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g-~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
.+.+++|.|+..| ..+.+..+++.+.+.+.....+ -||||.|+..||.++++.|++.++..+.....|.|+||.|..
T Consensus 439 lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G--~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~ 516 (1143)
T KOG4177|consen 439 LGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQG--FTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAAD 516 (1143)
T ss_pred cCCChhhhhhhcccHhhhhhhHhhcCCCcchhcccc--CcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhh
Confidence 3457788888888 6777777777777777665544 688888888888888888888887777777778888888888
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.+...+++.++++|++++.++. .|+||||+|+..|+.++|++|++++.... .....+.+
T Consensus 517 ~~~v~~~~~l~~~ga~v~~~~~-r~~TpLh~A~~~g~v~~VkfLLe~gAdv~--------------------ak~~~G~T 575 (1143)
T KOG4177|consen 517 EDTVKVAKILLEHGANVDLRTG-RGYTPLHVAVHYGNVDLVKFLLEHGADVN--------------------AKDKLGYT 575 (1143)
T ss_pred hhhHHHHHHHhhcCCceehhcc-cccchHHHHHhcCCchHHHHhhhCCcccc--------------------ccCCCCCC
Confidence 8888888888888999988886 89999999999999999999998853221 12244555
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCC-----ccccccCCCCHHHHHH
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGAS-----LTAENANGWTPLMVAR 248 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad-----~~~~d~~G~TpL~~A~ 248 (420)
+++.|+..|+.+++.+|+++|+++| ..+.+|.||||+|++.|+.+++++|+..+++ ....+..|.+|..++.
T Consensus 576 PLH~Aa~~G~~~i~~LLlk~GA~vn---a~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e 652 (1143)
T KOG4177|consen 576 PLHQAAQQGHNDIAELLLKHGASVN---AADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAE 652 (1143)
T ss_pred hhhHHHHcChHHHHHHHHHcCCCCC---cccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHH
Confidence 5555699999999999999999999 7889999999999999999999999999999 7778889999999988
Q ss_pred HcCchhHH
Q 014696 249 SWHRTGLE 256 (420)
Q Consensus 249 ~~g~~~i~ 256 (420)
..-....-
T Consensus 653 ~~~~~~~~ 660 (1143)
T KOG4177|consen 653 ELDTDRQD 660 (1143)
T ss_pred Hhhhhhhh
Confidence 76554443
No 41
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94 E-value=8.8e-26 Score=239.68 Aligned_cols=177 Identities=24% Similarity=0.304 Sum_probs=157.8
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
.+.++||.||..|+.++++.|++.|+++|..|..|+||||+|+.+|+.+++++|+++|++++.+|. +|.||||+|+..|
T Consensus 524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~-~G~TpL~~A~~~g 602 (823)
T PLN03192 524 NMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDA-NGNTALWNAISAK 602 (823)
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCC-CCCCHHHHHHHhC
Confidence 346899999999999999999999999999999999999999999999999999999999999986 9999999999999
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|++.+.... ......++..|+.+|+.+++++|+++|++++ ..|..|.|
T Consensus 603 ~~~iv~~L~~~~~~~~----------------------~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin---~~d~~G~T 657 (823)
T PLN03192 603 HHKIFRILYHFASISD----------------------PHAAGDLLCTAAKRNDLTAMKELLKQGLNVD---SEDHQGAT 657 (823)
T ss_pred CHHHHHHHHhcCcccC----------------------cccCchHHHHHHHhCCHHHHHHHHHCCCCCC---CCCCCCCC
Confidence 9999999996532211 1123345666799999999999999999999 77899999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCC-CCHHHHHHHcCc
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANG-WTPLMVARSWHR 252 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G-~TpL~~A~~~g~ 252 (420)
|||+|+..|+.+++++|+++|+|++..|..| .||++++.....
T Consensus 658 pLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~ 701 (823)
T PLN03192 658 ALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQK 701 (823)
T ss_pred HHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999988 999988865433
No 42
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.5e-25 Score=214.85 Aligned_cols=211 Identities=16% Similarity=0.048 Sum_probs=169.6
Q ss_pred HHHHcCCHHHHHHHHHhCCCcccc----cCCCCCCcHHHHHHH--cCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 22 SAARDGDLQEAKALLEYNPRLVRY----STFGVRNSPLHYSAA--QGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 22 ~Aa~~g~~~~v~~Ll~~~~~~~~~----~~~~~g~t~Lh~Aa~--~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
.|+..+..|+++.|+.++.+++.. .....++|+||+|+. .|+.++|++|+++|+|++.. .+.||||.|+..+
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~~ 160 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICKK 160 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHcC
Confidence 789999999999999999997711 133346899999999 99999999999999999985 4589999999999
Q ss_pred cHHHHHHHHHcCCCCCcccc-----CCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc
Q 014696 96 HWEVVLTLILYKANIHRADY-----LNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF 170 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~-----~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (420)
+.+++++|+.+|++...... ..+.|++|.|...++.+++++|+++|+.. +..+.
T Consensus 161 ~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI---------------------N~kD~ 219 (437)
T PHA02795 161 ESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI---------------------NQLDA 219 (437)
T ss_pred cHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc---------------------CcCCC
Confidence 99999999999985433321 24789999999999999999999875432 22333
Q ss_pred -hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCC--------HHHHHHHHHhCCCccccccCCC
Q 014696 171 -HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGN--------AQCCQILIAMGASLTAENANGW 241 (420)
Q Consensus 171 -~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~--------~~iv~~Ll~~gad~~~~d~~G~ 241 (420)
+.++++.|+..|+.+++++|+++|++++ .++..|.||||+|+..|+ .+++++|+++|++++.....
T Consensus 220 ~G~TpLh~Aa~~g~~eiVelLL~~GAdIN---~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~-- 294 (437)
T PHA02795 220 GGRTLLYRAIYAGYIDLVSWLLENGANVN---AVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKLA-- 294 (437)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhHH--
Confidence 3445555699999999999999999999 778999999999999984 69999999999998765432
Q ss_pred CHHHHHHHcCchhHHHHhhhCC
Q 014696 242 TPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 242 TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
.+.. ...+.++++.+.++.
T Consensus 295 -~~~~--~~~n~~~ik~lI~y~ 313 (437)
T PHA02795 295 -ILNN--TIENHDVIKLCIKYF 313 (437)
T ss_pred -hhhc--ccchHHHHHHHHHHH
Confidence 2211 112567777776654
No 43
>PHA02792 ankyrin-like protein; Provisional
Probab=99.93 E-value=4.1e-25 Score=219.32 Aligned_cols=222 Identities=14% Similarity=0.083 Sum_probs=162.5
Q ss_pred CHHHHHHHH-cCCHHHHHHHHHhCCCccc--c--------------------------------cCCCCCCcHHHHHHHc
Q 014696 17 GERLVSAAR-DGDLQEAKALLEYNPRLVR--Y--------------------------------STFGVRNSPLHYSAAQ 61 (420)
Q Consensus 17 ~~~L~~Aa~-~g~~~~v~~Ll~~~~~~~~--~--------------------------------~~~~~g~t~Lh~Aa~~ 61 (420)
.++++.|+. .|+.|++++|++.|++... . ..+..|+||||+|+..
T Consensus 106 ~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~ 185 (631)
T PHA02792 106 NIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIIT 185 (631)
T ss_pred CcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhh
Confidence 467788866 6999999999999976311 0 1223489999999999
Q ss_pred C-------cHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC--cHHHHHHHHHc--------------------------
Q 014696 62 G-------HHEIVSLLIESGVDINLRNYRGQTALMQACQHG--HWEVVLTLILY-------------------------- 106 (420)
Q Consensus 62 g-------~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g--~~~iv~~Ll~~-------------------------- 106 (420)
+ +.++++.|+++|++++..|..|.||||+|+.+. ..|++++|++.
T Consensus 186 ~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~i 265 (631)
T PHA02792 186 RSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKI 265 (631)
T ss_pred CCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCc
Confidence 9 899999999999999999999999999999888 66676666542
Q ss_pred -----------------------------------------------------------------CCCCCccccCCCChH
Q 014696 107 -----------------------------------------------------------------KANIHRADYLNGGTA 121 (420)
Q Consensus 107 -----------------------------------------------------------------ga~~~~~~~~~g~tp 121 (420)
|+++.. .....+
T Consensus 266 d~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r---~~~~n~ 342 (631)
T PHA02792 266 DNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYR---FKHINK 342 (631)
T ss_pred cHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCcccc---CCcchH
Confidence 222110 012233
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccch--hhHHHHHH-hcCC---HHHHHHHHHcCC
Q 014696 122 LHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFH--LEVLLHLT-LNGH---VESVQLLLDLGA 195 (420)
Q Consensus 122 L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~aa-~~g~---~~~v~~Ll~~ga 195 (420)
++.|+..|+.+++++|+++|+. .+..+.. ..+++|++ .... .+++++|+++|+
T Consensus 343 ~~~Aa~~gn~eIVelLIs~GAD---------------------IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 343 YFQKFDNRDPKVVEYILKNGNV---------------------VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHHHcCCHHHHHHHHHcCCc---------------------hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 4444444555555555444322 1222222 23555653 3333 346899999999
Q ss_pred CcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHH---c-------CchhHHHHhhhCCCC
Q 014696 196 SVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARS---W-------HRTGLEDILSTQPEG 265 (420)
Q Consensus 196 ~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~---~-------g~~~i~~lL~~~~~~ 265 (420)
+++ .+|..|.||||+|+..++.+++++|+++|++++.+|..|+|||++|+. . ...+++++|++++..
T Consensus 402 DIN---~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~ 478 (631)
T PHA02792 402 DIN---KIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPT 478 (631)
T ss_pred ccc---cccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCC
Confidence 999 788999999999999999999999999999999999999999999976 2 235668888877644
No 44
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93 E-value=2.8e-25 Score=234.44 Aligned_cols=237 Identities=23% Similarity=0.196 Sum_probs=176.4
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHH-HHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLH-YSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQAC 92 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh-~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~ 92 (420)
+...++|+.|++.||.+.|+.+++.+...+....+..|+|||| .|+..++.+++++|+++|+ .+..|.||||.|+
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~ 90 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAIS 90 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHH
Confidence 3556799999999999999999998444444445567799999 8999999999999999987 6778999999999
Q ss_pred HcC---cHHHHHHHHHcCCC------CC---ccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCC
Q 014696 93 QHG---HWEVVLTLILYKAN------IH---RADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTG 160 (420)
Q Consensus 93 ~~g---~~~iv~~Ll~~ga~------~~---~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~ 160 (420)
..+ ...+++++.+.+.+ ++ ..+...|.||||+|+.+|+.++|++|+++|+.............
T Consensus 91 ~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~----- 165 (743)
T TIGR00870 91 LEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVK----- 165 (743)
T ss_pred hccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhc-----
Confidence 732 23344444444422 11 11223699999999999999999999998876552111100000
Q ss_pred CchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcC---------CHHHHHHHHHhCC
Q 014696 161 SILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGG---------NAQCCQILIAMGA 231 (420)
Q Consensus 161 ~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g---------~~~iv~~Ll~~ga 231 (420)
....+....+.+++..|+..|+.+++++|+++|+|++ ..|..|+||||+|+..+ ...+.+++++.++
T Consensus 166 -~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin---~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~ 241 (743)
T TIGR00870 166 -SQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADIL---TADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLD 241 (743)
T ss_pred -CCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchh---hHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 0000111223445555699999999999999999999 77889999999999987 2346677777655
Q ss_pred Cc-------cccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 232 SL-------TAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 232 d~-------~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
.. +..|.+|.||||+|++.|+.+++++|++..
T Consensus 242 ~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 242 KLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred ccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence 54 667999999999999999999999999853
No 45
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=2.6e-25 Score=187.20 Aligned_cols=217 Identities=24% Similarity=0.251 Sum_probs=183.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
+-+-.|.+.|+-+.+..++...++...... ..|.++++.|+-.|+.+.+..++.+|+..|..+--+++|+++++...++
T Consensus 64 ~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~-p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L 142 (296)
T KOG0502|consen 64 SLLTVAVRSGNSDVAVQSAQLDPDAIDETD-PEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHL 142 (296)
T ss_pred cccchhhhcCCcHHHHHhhccCCCCCCCCC-chhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHH
Confidence 346678889999999888887776654443 3479999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHH
Q 014696 98 EVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLH 177 (420)
Q Consensus 98 ~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 177 (420)
+.+..+.+.. +|..|. .|.|||.||+..|++.+|++|++.|+.+.... .....++..
T Consensus 143 ~~~~~~~~n~--VN~~De-~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lg--------------------k~resALsL 199 (296)
T KOG0502|consen 143 DVVDLLVNNK--VNACDE-FGFTPLIWAAAKGHIPVVQFLLNSGADPDALG--------------------KYRESALSL 199 (296)
T ss_pred HHHHHHhhcc--ccCccc-cCchHhHHHHhcCchHHHHHHHHcCCChhhhh--------------------hhhhhhHhH
Confidence 9888776544 556665 99999999999999999999998865443211 112345555
Q ss_pred HHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHH
Q 014696 178 LTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLED 257 (420)
Q Consensus 178 aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~ 257 (420)
|...|..++|++||+.+.|+| ..|-+|-|||-||++.++.++|+.|++.|||++..+..|++++.+|+..|+. +++
T Consensus 200 At~ggytdiV~lLL~r~vdVN---vyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vq 275 (296)
T KOG0502|consen 200 ATRGGYTDIVELLLTREVDVN---VYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQ 275 (296)
T ss_pred HhcCChHHHHHHHHhcCCCcc---eeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHH
Confidence 688999999999999999999 6788999999999999999999999999999999999999999999999998 555
Q ss_pred HhhhC
Q 014696 258 ILSTQ 262 (420)
Q Consensus 258 lL~~~ 262 (420)
..+++
T Consensus 276 qvie~ 280 (296)
T KOG0502|consen 276 QVIEK 280 (296)
T ss_pred HHHHH
Confidence 55443
No 46
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.92 E-value=2.6e-25 Score=200.17 Aligned_cols=162 Identities=27% Similarity=0.382 Sum_probs=141.6
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHc-----CcHHHHHHHHHcCCCCCccccCCCCh
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIESG-VDINLRNYRGQTALMQACQH-----GHWEVVLTLILYKANIHRADYLNGGT 120 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g-~~v~~~d~~g~TpL~~A~~~-----g~~~iv~~Ll~~ga~~~~~~~~~g~t 120 (420)
.+.+|+|+||||+.++++++|+.||+.| +++|.+|+.|+||+|+|+.. .+.++|..|.+.| |+|.+-...|+|
T Consensus 264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT 342 (452)
T KOG0514|consen 264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT 342 (452)
T ss_pred hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence 3456799999999999999999999986 78999999999999998853 4677888888765 777777678999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccc
Q 014696 121 ALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEY 200 (420)
Q Consensus 121 pL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~ 200 (420)
+|++|+.+|+.++|+.|| .-|+|+|
T Consensus 343 ALMLAVSHGr~d~vk~LL-----------------------------------------------------acgAdVN-- 367 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALL-----------------------------------------------------ACGADVN-- 367 (452)
T ss_pred hhhhhhhcCcHHHHHHHH-----------------------------------------------------HccCCCc--
Confidence 999999888877666665 6789999
Q ss_pred cccCCCCccHHHHHHHcCCHHHHHHHHHh-CCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 201 LSVSGAGSTSLHYAACGGNAQCCQILIAM-GASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 201 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.+|.+|.|+||.|+++||.||+++||.. +.|....|.+|.|+|.+|...||.+|.-+|..+-..
T Consensus 368 -iQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~~n~ 432 (452)
T KOG0514|consen 368 -IQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAHMNI 432 (452)
T ss_pred -cccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHHHHh
Confidence 8899999999999999999999999987 899999999999999999999999999999876544
No 47
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91 E-value=4.1e-24 Score=208.74 Aligned_cols=230 Identities=30% Similarity=0.345 Sum_probs=184.3
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+-++||.|+.+|+.++++.|+++.+-+...+. .|.+|||+|+..|+.+++++|+.++..+|..+..|.||||.|++
T Consensus 47 ~~gfTalhha~Lng~~~is~llle~ea~ldl~d~--kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaq 124 (854)
T KOG0507|consen 47 YSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDT--KGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQ 124 (854)
T ss_pred ccchhHHHHHHhcCchHHHHHHhcchhhhhhhhc--cCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhh
Confidence 3566889999999999999999999887776663 45899999999999999999999998889999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
+||.+++++|+++|+++-..++ .+.|+|.+|++.|..++++.|+..... . . ...... -........
T Consensus 125 hgh~dvv~~Ll~~~adp~i~nn-s~~t~ldlA~qfgr~~Vvq~ll~~~~~-~--~--------~~~~~~--~~~~~~~~~ 190 (854)
T KOG0507|consen 125 HGHLEVVFYLLKKNADPFIRNN-SKETVLDLASRFGRAEVVQMLLQKKFP-V--Q--------SSLRVG--DIKRPFPAI 190 (854)
T ss_pred hcchHHHHHHHhcCCCccccCc-ccccHHHHHHHhhhhHHHHHHhhhccc-h--h--------hcccCC--CCCCCCCCc
Confidence 9999999999999999999887 899999999999999999999865100 0 0 011111 222333344
Q ss_pred HHHH-HHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc--
Q 014696 174 VLLH-LTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW-- 250 (420)
Q Consensus 174 ~~l~-aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~-- 250 (420)
..+| |+++||.++++.|++.|.++|. .. ..-|+||.|+..|..++|++|++.|.+...+|.+|+|+|.+-...
T Consensus 191 ~plHlaakngh~~~~~~ll~ag~din~---~t-~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~ 266 (854)
T KOG0507|consen 191 YPLHLAAKNGHVECMQALLEAGFDINY---TT-EDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQE 266 (854)
T ss_pred CCcchhhhcchHHHHHHHHhcCCCccc---cc-ccchhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcch
Confidence 4455 5999999999999999999994 33 345899999999999999999999999999999999999887665
Q ss_pred -CchhHHHHhhhCC
Q 014696 251 -HRTGLEDILSTQP 263 (420)
Q Consensus 251 -g~~~i~~lL~~~~ 263 (420)
...+++-++....
T Consensus 267 ~~~~ei~ga~~~~~ 280 (854)
T KOG0507|consen 267 NRRYEIAGAVKNFE 280 (854)
T ss_pred hhhhhhhhhhhccc
Confidence 3445555555443
No 48
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91 E-value=2.7e-24 Score=209.93 Aligned_cols=214 Identities=22% Similarity=0.262 Sum_probs=162.4
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
.+.+|.|+||.|+.+|+.+++++|++..+-++..|..|.+|||+|+..|+.++|++|+.++..+|.... .|.||||.|+
T Consensus 45 qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~-e~~tplhlaa 123 (854)
T KOG0507|consen 45 QDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNI-ENETPLHLAA 123 (854)
T ss_pred cCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccc-cCcCccchhh
Confidence 334678999999999999999999999999999999999999999999999999999999988887775 9999999999
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHH-HhcCCHHHHHHHHHcCCCcccccccCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHL-TLNGHVESVQLLLDLGASVSEYLSVSG 205 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a-a~~g~~~~v~~Ll~~ga~~~~~~~~~~ 205 (420)
.+||.+++.+|+.++........ ......+.... ++..-.... +.. .+ .+.++...| + . .++-
T Consensus 124 qhgh~dvv~~Ll~~~adp~i~nn--------s~~t~ldlA~q-fgr~~Vvq~ll~~-~~-~~~~~~~~~-~-~---~~~~ 187 (854)
T KOG0507|consen 124 QHGHLEVVFYLLKKNADPFIRNN--------SKETVLDLASR-FGRAEVVQMLLQK-KF-PVQSSLRVG-D-I---KRPF 187 (854)
T ss_pred hhcchHHHHHHHhcCCCccccCc--------ccccHHHHHHH-hhhhHHHHHHhhh-cc-chhhcccCC-C-C---CCCC
Confidence 99999999999988765432111 00111111111 111111111 222 22 222344444 1 1 4566
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHH
Q 014696 206 AGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLM 280 (420)
Q Consensus 206 ~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~ 280 (420)
.+.+|||.|+++|+.++++.|+++|.|+|.....| |+||.|+.-|..+++.+|++.+-.. ...+.++++.+.
T Consensus 188 ~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~--h~~n~~~qtald 259 (854)
T KOG0507|consen 188 PAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINT--HIKNQHGQTALD 259 (854)
T ss_pred CCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhcccc--ccccccchHHHH
Confidence 78999999999999999999999999999888776 8999999999999999999987653 334566666553
No 49
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90 E-value=1.9e-24 Score=181.99 Aligned_cols=202 Identities=27% Similarity=0.257 Sum_probs=177.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+..+++.|+-.|+.+++..++.++...+..+..+ .+|+.+++.+-+++.+..+.++ .+|..|..|.|||++|+.+
T Consensus 95 ~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p--~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~ 170 (296)
T KOG0502|consen 95 EGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMP--WSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAK 170 (296)
T ss_pred hhhhhhhhcCCCCCcceeeeeecccccCCcccccc--CChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhc
Confidence 45567999999999999999999998888776655 7999999999999999988887 7899999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEV 174 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
|++++|++|++.|++++.... ...|+|.+|.+.|..+||++|++.+...... ...++++
T Consensus 171 G~i~vV~fLL~~GAdp~~lgk-~resALsLAt~ggytdiV~lLL~r~vdVNvy--------------------DwNGgTp 229 (296)
T KOG0502|consen 171 GHIPVVQFLLNSGADPDALGK-YRESALSLATRGGYTDIVELLLTREVDVNVY--------------------DWNGGTP 229 (296)
T ss_pred CchHHHHHHHHcCCChhhhhh-hhhhhHhHHhcCChHHHHHHHHhcCCCccee--------------------ccCCCce
Confidence 999999999999999998875 7889999999999999999999764333222 2235677
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHH
Q 014696 175 LLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLM 245 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~ 245 (420)
+++|++.||.++++.|++.|++++ ..+..|.++|..|+..|+. +|+..+++.++.+.+|..-+||+|
T Consensus 230 LlyAvrgnhvkcve~Ll~sGAd~t---~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 230 LLYAVRGNHVKCVESLLNSGADVT---QEDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRTPLH 296 (296)
T ss_pred eeeeecCChHHHHHHHHhcCCCcc---cccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCCCCC
Confidence 888899999999999999999999 7888999999999999998 999999998888888887777764
No 50
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.90 E-value=9.3e-24 Score=199.70 Aligned_cols=229 Identities=28% Similarity=0.333 Sum_probs=170.0
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
..+-.+..|...|+.+.|+.|+..+...+....++ .|+||-++.-.+.++|++|+++|++||..|..|+||||.|+..
T Consensus 39 ~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~Dg--lTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaasc 116 (527)
T KOG0505|consen 39 EDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDG--LTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASC 116 (527)
T ss_pred CchHHHHhccccccHHHHHHHhccCCCccccCCcc--chhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccc
Confidence 44567899999999999999999998887666554 8999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhH-----HHHhhhccCCCCchhccccc
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAW-----NRLRKKSNKTGSILEFDERY 169 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 169 (420)
|+..++++|+.+|+++...+. .|..|+..+...-..+++..-............ ..+.............+..+
T Consensus 117 g~~~i~~~li~~gA~~~avNs-dg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~ 195 (527)
T KOG0505|consen 117 GYLNIVEYLIQHGANLLAVNS-DGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARH 195 (527)
T ss_pred ccHHHHHHHHHhhhhhhhccC-CCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccc
Confidence 999999999999999988876 888888877655555444443322111100000 00000000001111122222
Q ss_pred chhhHHHH-HHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHH
Q 014696 170 FHLEVLLH-LTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVAR 248 (420)
Q Consensus 170 ~~~~~~l~-aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 248 (420)
..+.+.+| |+.+|..++.++|++.|.+++ .+|.+|+||||.|+..|..+++++|+++|++.+.++..|.||+.+|.
T Consensus 196 ~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~---~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~d 272 (527)
T KOG0505|consen 196 ARGATALHVAAANGYTEVAALLLQAGYSVN---IKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVAD 272 (527)
T ss_pred cccchHHHHHHhhhHHHHHHHHHHhccCcc---cccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchh
Confidence 22444444 488888888888888888888 67788888888888888888888888888888888888888888876
Q ss_pred H
Q 014696 249 S 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 273 e 273 (527)
T KOG0505|consen 273 E 273 (527)
T ss_pred h
Confidence 5
No 51
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89 E-value=1.5e-22 Score=173.61 Aligned_cols=137 Identities=18% Similarity=0.183 Sum_probs=116.3
Q ss_pred CCCcHHHHHHHcCcH----HHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHH---HHHHHHcCCCCCccccCCCChHH
Q 014696 50 VRNSPLHYSAAQGHH----EIVSLLIESGVDINLRNYRGQTALMQACQHGHWEV---VLTLILYKANIHRADYLNGGTAL 122 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~----~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~i---v~~Ll~~ga~~~~~~~~~g~tpL 122 (420)
.+.++||+|++.|+. +++++|++.|++++.+|..|+||||+|+.+|+.+. +++|+++|++++.++...|.|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 446899999999998 66677888899999999999999999999987654 78999999999988744799999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccc
Q 014696 123 HLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLS 202 (420)
Q Consensus 123 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~ 202 (420)
|+|+..|+.+++++|++ +.|++++ .
T Consensus 99 h~A~~~g~~~iv~~Ll~----------------------------------------------------~~gad~~---~ 123 (166)
T PHA02743 99 HIAASTKNYELAEWLCR----------------------------------------------------QLGVNLG---A 123 (166)
T ss_pred HHHHHhCCHHHHHHHHh----------------------------------------------------ccCCCcc---C
Confidence 99998888877776663 2467777 6
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCC
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGW 241 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~ 241 (420)
++..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 124 ~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 124 INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 678899999999999999999999999999998887764
No 52
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.88 E-value=6.2e-22 Score=210.39 Aligned_cols=180 Identities=21% Similarity=0.248 Sum_probs=150.7
Q ss_pred cCcccCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCH
Q 014696 8 GNSFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTA 87 (420)
Q Consensus 8 g~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~Tp 87 (420)
+...+......+|+.||..|+.+.++.|++.+.+++..+ ..|+||||+|+.+|+.+++++|+++|+++|.+|.+|+||
T Consensus 517 ~~~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d--~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~Tp 594 (823)
T PLN03192 517 GGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGD--SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTA 594 (823)
T ss_pred ccccCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCH
Confidence 333344455688999999999999999999999887654 456999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc
Q 014696 88 LMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE 167 (420)
Q Consensus 88 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
||+|+..|+.+++++|++.++..+. ..|.++||.|+..|+.+++++|++++... +.
T Consensus 595 L~~A~~~g~~~iv~~L~~~~~~~~~---~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi---------------------n~ 650 (823)
T PLN03192 595 LWNAISAKHHKIFRILYHFASISDP---HAAGDLLCTAAKRNDLTAMKELLKQGLNV---------------------DS 650 (823)
T ss_pred HHHHHHhCCHHHHHHHHhcCcccCc---ccCchHHHHHHHhCCHHHHHHHHHCCCCC---------------------CC
Confidence 9999999999999999988776543 35789999999999999999999875432 22
Q ss_pred ccchh-hHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCC-ccHHHHHHH
Q 014696 168 RYFHL-EVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAG-STSLHYAAC 216 (420)
Q Consensus 168 ~~~~~-~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g-~TpLh~Aa~ 216 (420)
.+..+ ++++.|+..|+.+++++|+++|++++ ..+..| .||+.++..
T Consensus 651 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~---~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 651 EDHQGATALQVAMAEDHVDMVRLLIMNGADVD---KANTDDDFSPTELREL 698 (823)
T ss_pred CCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHH
Confidence 33334 44555599999999999999999999 666667 888877643
No 53
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=5e-22 Score=209.76 Aligned_cols=230 Identities=20% Similarity=0.152 Sum_probs=163.5
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHc--CCCCCCccCCCCCHHH-HHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIES--GVDINLRNYRGQTALM-QACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~--g~~v~~~d~~g~TpL~-~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
.++..++.|+..|+.+.++.+++. +.++|..|..|+|||| .|+.+++.+++++|+++|+ .+ ..|.||||.|+
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~-~~G~T~Lh~A~ 90 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RG-AVGDTLLHAIS 90 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CC-CcChHHHHHHH
Confidence 346899999999999999999998 8999999999999999 8999999999999999987 33 38999999998
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCccccc-----
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYL----- 201 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~----- 201 (420)
.. +.+.++.++............. .............+.++++.|+.+|+.++|++|+++|++++...
T Consensus 91 ~~-~~~~v~~ll~~l~~~~~~~~~~------~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~ 163 (743)
T TIGR00870 91 LE-YVDAVEAILLHLLAAFRKSGPL------ELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFF 163 (743)
T ss_pred hc-cHHHHHHHHHHHhhcccccCch------hhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchh
Confidence 73 3343443332211100000000 00000001111234455666699999999999999999998431
Q ss_pred ------ccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcC---------chhHHHHhhhCCCCc
Q 014696 202 ------SVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWH---------RTGLEDILSTQPEGR 266 (420)
Q Consensus 202 ------~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g---------~~~i~~lL~~~~~~~ 266 (420)
.....|.||||.|+..|+.+++++|+++|+|++.+|..|+||||+|+..+ ...+.+++....+..
T Consensus 164 ~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~ 243 (743)
T TIGR00870 164 VKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKL 243 (743)
T ss_pred hcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence 11135899999999999999999999999999999999999999999986 234555665544332
Q ss_pred c-----ccCCCCCCCchHHHHHHHHHHcCCCCCC
Q 014696 267 L-----EVLPSPYLALPLMSIVKIARECGWRNSD 295 (420)
Q Consensus 267 ~-----~~~~~~~~~~pl~~~l~~a~~~g~~~~~ 295 (420)
. ....+..+.+|++ .|.+.|..++.
T Consensus 244 ~~~~el~~i~N~~g~TPL~----~A~~~g~~~l~ 273 (743)
T TIGR00870 244 RDSKELEVILNHQGLTPLK----LAAKEGRIVLF 273 (743)
T ss_pred CChHhhhhhcCCCCCCchh----hhhhcCCccHH
Confidence 1 1334667777764 34445544443
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=2.3e-22 Score=181.30 Aligned_cols=162 Identities=29% Similarity=0.356 Sum_probs=139.1
Q ss_pred cccCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHc-----CcHHHHHHHHHcCCCCCCcc-CC
Q 014696 10 SFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQ-----GHHEIVSLLIESGVDINLRN-YR 83 (420)
Q Consensus 10 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~-----g~~~iv~~Ll~~g~~v~~~d-~~ 83 (420)
.+..++++|+||+|+..+|+++|+.||+.+...... .+.-|+||+|+|+.. .+.++|..|...| |||.+- ..
T Consensus 262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~-qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~ 339 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQ-QNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH 339 (452)
T ss_pred hhhcCCCCeeeeeeecccchHHHHHHhccCcccccc-cccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence 456688999999999999999999999988543322 233468999998873 6789999999876 788765 46
Q ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCch
Q 014696 84 GQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSIL 163 (420)
Q Consensus 84 g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (420)
|+|+||+|+.+|+.++|+.||..|+|+|.+|+ +|.|+|+.|+.+||.||+++||..
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDd-DGSTALMCA~EHGhkEivklLLA~----------------------- 395 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDD-DGSTALMCAAEHGHKEIVKLLLAV----------------------- 395 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccC-CccHHHhhhhhhChHHHHHHHhcc-----------------------
Confidence 99999999999999999999999999999998 999999999999999999999953
Q ss_pred hcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHh
Q 014696 164 EFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAM 229 (420)
Q Consensus 164 ~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~ 229 (420)
.+.|.. ..|.+|.|+|.+|...|+.||.-+|..+
T Consensus 396 -----------------------------p~cd~s---LtD~DgSTAl~IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 396 -----------------------------PSCDIS---LTDVDGSTALSIALEAGHREIAVMLYAH 429 (452)
T ss_pred -----------------------------Ccccce---eecCCCchhhhhHHhcCchHHHHHHHHH
Confidence 233444 6788999999999999999999998875
No 55
>PHA02741 hypothetical protein; Provisional
Probab=99.87 E-value=1.3e-21 Score=168.53 Aligned_cols=136 Identities=23% Similarity=0.324 Sum_probs=117.2
Q ss_pred CCCccCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHH
Q 014696 77 INLRNYRGQTALMQACQHGHWEVVLTLIL------YKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWN 150 (420)
Q Consensus 77 v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~------~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 150 (420)
++.+|..|.||||+|++.|+.++++.|+. .|++++..+. .|.||||+|+..|+.+++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~-~g~T~Lh~A~~~g~~~~~~--------------- 77 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDD-AGQMCIHIAAEKHEAQLAA--------------- 77 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCC-CCCcHHHHHHHcCChHHHH---------------
Confidence 44667889999999999999999998854 3678888886 8999999999998865432
Q ss_pred HHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCC-CCccHHHHHHHcCCHHHHHHHHH-
Q 014696 151 RLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSG-AGSTSLHYAACGGNAQCCQILIA- 228 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~-~g~TpLh~Aa~~g~~~iv~~Ll~- 228 (420)
+++++|++.|++++ .++. .|.||||+|+..++.+++++|++
T Consensus 78 ----------------------------------~ii~~Ll~~gadin---~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~ 120 (169)
T PHA02741 78 ----------------------------------EIIDHLIELGADIN---AQEMLEGDTALHLAAHRRDHDLAEWLCCQ 120 (169)
T ss_pred ----------------------------------HHHHHHHHcCCCCC---CCCcCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 34567788899998 6664 89999999999999999999998
Q ss_pred hCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 229 MGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 229 ~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.|++++.+|..|+|||++|+..++.+++++|++..+.
T Consensus 121 ~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 121 PGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred CCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999987554
No 56
>PHA02741 hypothetical protein; Provisional
Probab=99.87 E-value=2.5e-21 Score=166.85 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=112.8
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHH------cCCCCCCccCCCCCHHHHHHHcCc----HHHHHHHHHcCCCCCccccCCC
Q 014696 49 GVRNSPLHYSAAQGHHEIVSLLIE------SGVDINLRNYRGQTALMQACQHGH----WEVVLTLILYKANIHRADYLNG 118 (420)
Q Consensus 49 ~~g~t~Lh~Aa~~g~~~iv~~Ll~------~g~~v~~~d~~g~TpL~~A~~~g~----~~iv~~Ll~~ga~~~~~~~~~g 118 (420)
..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+ .+++++|+++|++++.++...|
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g 98 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEG 98 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCC
Confidence 456899999999999999999864 368899999999999999999998 5899999999999998874489
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcc
Q 014696 119 GTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVS 198 (420)
Q Consensus 119 ~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~ 198 (420)
.||||+|+..++.+++++|++. .|++++
T Consensus 99 ~TpLh~A~~~~~~~iv~~Ll~~----------------------------------------------------~g~~~~ 126 (169)
T PHA02741 99 DTALHLAAHRRDHDLAEWLCCQ----------------------------------------------------PGIDLH 126 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHhC----------------------------------------------------CCCCCC
Confidence 9999999999988887777631 356666
Q ss_pred cccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 199 EYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 199 ~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
..+..|.||||+|+..|+.+++++|++.++..
T Consensus 127 ---~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 127 ---FCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred ---cCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 66788999999999999999999999987654
No 57
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=2.3e-21 Score=166.37 Aligned_cols=141 Identities=23% Similarity=0.295 Sum_probs=123.8
Q ss_pred cCCCCCCccCCCCCHHHHHHHcCcH----HHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhh
Q 014696 73 SGVDINLRNYRGQTALMQACQHGHW----EVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNA 148 (420)
Q Consensus 73 ~g~~v~~~d~~g~TpL~~A~~~g~~----~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~ 148 (420)
+|++++..+..+.++||+|++.|+. +++++|++.|++++..+. .|+||||+|+..|+.+.+
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~-~g~t~Lh~Aa~~g~~~~~-------------- 73 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDH-HGRQCTHMVAWYDRANAV-------------- 73 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCC-CCCcHHHHHHHhCccCHH--------------
Confidence 5778888888999999999999998 677788889999988886 899999999998876542
Q ss_pred HHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccC-CCCccHHHHHHHcCCHHHHHHHH
Q 014696 149 WNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVS-GAGSTSLHYAACGGNAQCCQILI 227 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~-~~g~TpLh~Aa~~g~~~iv~~Ll 227 (420)
+++++|+++|++++ .++ ..|.||||+|+..|+.+++++|+
T Consensus 74 ------------------------------------~~i~~Ll~~Gadin---~~d~~~g~TpLh~A~~~g~~~iv~~Ll 114 (166)
T PHA02743 74 ------------------------------------MKIELLVNMGADIN---ARELGTGNTLLHIAASTKNYELAEWLC 114 (166)
T ss_pred ------------------------------------HHHHHHHHcCCCCC---CCCCCCCCcHHHHHHHhCCHHHHHHHH
Confidence 23567778899998 666 58999999999999999999999
Q ss_pred H-hCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCcc
Q 014696 228 A-MGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 228 ~-~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~ 267 (420)
+ .|++++.+|..|+||||+|+..++.+++++|+++++...
T Consensus 115 ~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~ 155 (166)
T PHA02743 115 RQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD 155 (166)
T ss_pred hccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 5 799999999999999999999999999999999887643
No 58
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.87 E-value=2.2e-21 Score=183.68 Aligned_cols=200 Identities=28% Similarity=0.384 Sum_probs=155.9
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHH
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRC 133 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~i 133 (420)
.+.-|+..|..+-|..|+..|+++|..|.+|.|+||.++.-.+.+||++|+++|+++|..|. .|+||||.|+..||..+
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~-e~wtPlhaaascg~~~i 121 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDN-EGWTPLHAAASCGYLNI 121 (527)
T ss_pred HHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccccc-ccCCcchhhcccccHHH
Confidence 34567888999999999999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred HHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHH----------HHHHhcC----C-HHHHHHHHHcCCCcc
Q 014696 134 IRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVL----------LHLTLNG----H-VESVQLLLDLGASVS 198 (420)
Q Consensus 134 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------l~aa~~g----~-~~~v~~Ll~~ga~~~ 198 (420)
+++|+.+++...... .......+..........+ +.+++.- . .++-++ +..|.+.+
T Consensus 122 ~~~li~~gA~~~avN--------sdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~-l~~G~~~d 192 (527)
T KOG0505|consen 122 VEYLIQHGANLLAVN--------SDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQW-LNAGAELD 192 (527)
T ss_pred HHHHHHhhhhhhhcc--------CCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHH-Hhcccccc
Confidence 999998765322110 0000011111111111111 1111111 1 122333 34788777
Q ss_pred cccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCc
Q 014696 199 EYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGR 266 (420)
Q Consensus 199 ~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~ 266 (420)
..+..|.|.||.|+.+|..++.++|+++|.+++.+|.+||||||.|+.||+.++.++|.++++.-
T Consensus 193 ---~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~ 257 (527)
T KOG0505|consen 193 ---ARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADM 257 (527)
T ss_pred ---ccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhccc
Confidence 45556999999999999999999999999999999999999999999999999999999998873
No 59
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.87 E-value=4.3e-21 Score=177.44 Aligned_cols=116 Identities=21% Similarity=0.189 Sum_probs=72.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccC--CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCc-cCCCCCHHHHHHHc
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYST--FGVRNSPLHYSAAQGHHEIVSLLIESGVDINLR-NYRGQTALMQACQH 94 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~--~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~-d~~g~TpL~~A~~~ 94 (420)
++|+.|++.|+.++++.|+++|++++.... +..|.||||+|+..|+.+++++|+++|+++|.+ +..|.||||+|+..
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~ 114 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH 114 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence 456666666666666666666666654321 234566666666666666666666666666664 34566666666666
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCI 134 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv 134 (420)
|+.+++++|+++|++++..+. .|.||||+|+..++.+++
T Consensus 115 ~~~eivklLL~~GAdin~kd~-~G~TpL~~A~~~~~~~~~ 153 (300)
T PHA02884 115 GCLKCLEILLSYGADINIQTN-DMVTPIELALMICNNFLA 153 (300)
T ss_pred CCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHhCChhHH
Confidence 666666666666666666664 666666666666655544
No 60
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.87 E-value=5e-21 Score=177.02 Aligned_cols=149 Identities=18% Similarity=0.157 Sum_probs=125.8
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCCcc----CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHH
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDINLRN----YRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAAL 127 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d----~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 127 (420)
.++||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++..++..|.||||+|+.
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~ 113 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL 113 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence 467888888899999999999999999874 5899999999999999999999999999998754479999999998
Q ss_pred cCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCC
Q 014696 128 NGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAG 207 (420)
Q Consensus 128 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g 207 (420)
.|+.+++++|+ ++|++++ .++..|
T Consensus 114 ~~~~eivklLL-----------------------------------------------------~~GAdin---~kd~~G 137 (300)
T PHA02884 114 HGCLKCLEILL-----------------------------------------------------SYGADIN---IQTNDM 137 (300)
T ss_pred cCCHHHHHHHH-----------------------------------------------------HCCCCCC---CCCCCC
Confidence 88877665555 6788888 678899
Q ss_pred ccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 208 STSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 208 ~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
.||||+|++.++.+++..+. |.. .+..+.+|++++ ++.+++++|..+..
T Consensus 138 ~TpL~~A~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~---~n~ei~~~Lish~v 186 (300)
T PHA02884 138 VTPIELALMICNNFLAFMIC--DNE---ISNFYKHPKKIL---INFDILKILVSHFI 186 (300)
T ss_pred CCHHHHHHHhCChhHHHHhc--CCc---ccccccChhhhh---ccHHHHHHHHHHHH
Confidence 99999999999999886665 322 456677888875 46889999887765
No 61
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.85 E-value=7e-21 Score=161.63 Aligned_cols=129 Identities=22% Similarity=0.207 Sum_probs=82.1
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHcCC--C-----CCCccCCCCCHHHHHHHcCcH---HHHHHHHHcCCCCCccccCCC
Q 014696 49 GVRNSPLHYSAAQGHHEIVSLLIESGV--D-----INLRNYRGQTALMQACQHGHW---EVVLTLILYKANIHRADYLNG 118 (420)
Q Consensus 49 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~--~-----v~~~d~~g~TpL~~A~~~g~~---~iv~~Ll~~ga~~~~~~~~~g 118 (420)
..|.||||+|+..|+. +.++...+. + ++.+|..|+||||+|+..|+. +++++|+++|++++.+++..|
T Consensus 15 ~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g 92 (154)
T PHA02736 15 IEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFG 92 (154)
T ss_pred CCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCC
Confidence 3467777777777763 333322221 1 234566777777777777765 356777777777777664467
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcc
Q 014696 119 GTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVS 198 (420)
Q Consensus 119 ~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~ 198 (420)
.||||+|+..|+.+++++|+.+ .|++++
T Consensus 93 ~T~Lh~A~~~~~~~i~~~Ll~~----------------------------------------------------~g~d~n 120 (154)
T PHA02736 93 NTPLHIAVYTQNYELATWLCNQ----------------------------------------------------PGVNME 120 (154)
T ss_pred CcHHHHHHHhCCHHHHHHHHhC----------------------------------------------------CCCCCc
Confidence 7777777777666665555521 245555
Q ss_pred cccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcc
Q 014696 199 EYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLT 234 (420)
Q Consensus 199 ~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~ 234 (420)
..+..|.||||+|+..|+.+++++|+++|++.+
T Consensus 121 ---~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 121 ---ILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ---cccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 556677777777777777777777777776653
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83 E-value=1.8e-20 Score=159.06 Aligned_cols=133 Identities=22% Similarity=0.284 Sum_probs=108.3
Q ss_pred CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCC--C-----CCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhH
Q 014696 77 INLRNYRGQTALMQACQHGHWEVVLTLILYKA--N-----IHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAW 149 (420)
Q Consensus 77 v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga--~-----~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~ 149 (420)
.+.+|..|.||||+|++.|+. ++++...+. + +...+. .|.||||+|+..|+.+.+
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~-~g~t~Lh~a~~~~~~~~~--------------- 71 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNR-HGKQCVHIVSNPDKADPQ--------------- 71 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcC-CCCEEEEeecccCchhHH---------------
Confidence 456788899999999999983 444433322 2 122344 899999999988876532
Q ss_pred HHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccC-CCCccHHHHHHHcCCHHHHHHHHH
Q 014696 150 NRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVS-GAGSTSLHYAACGGNAQCCQILIA 228 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~-~~g~TpLh~Aa~~g~~~iv~~Ll~ 228 (420)
+++++|+++|++++ .++ ..|.||||+|+..|+.+++++|++
T Consensus 72 -----------------------------------e~v~~Ll~~gadin---~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~ 113 (154)
T PHA02736 72 -----------------------------------EKLKLLMEWGADIN---GKERVFGNTPLHIAVYTQNYELATWLCN 113 (154)
T ss_pred -----------------------------------HHHHHHHHcCCCcc---ccCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence 34567788899998 666 489999999999999999999998
Q ss_pred h-CCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 229 M-GASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 229 ~-gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
+ |++++.+|..|+||||+|+..|+.+++++|+.+++.
T Consensus 114 ~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 114 QPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred CCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4 999999999999999999999999999999998765
No 63
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.81 E-value=2.1e-20 Score=188.07 Aligned_cols=261 Identities=23% Similarity=0.253 Sum_probs=211.2
Q ss_pred cCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCc-cCCCCCHHHH
Q 014696 12 GCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLR-NYRGQTALMQ 90 (420)
Q Consensus 12 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~-d~~g~TpL~~ 90 (420)
.-++-.++|..|+..|+.|+|+.|+..|+.+...+..+ -+||.+|+..||..+|+.|+.+.++++.+ |+.+.|+|.+
T Consensus 753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkg--f~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSl 830 (2131)
T KOG4369|consen 753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKG--FVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSL 830 (2131)
T ss_pred cCccccccccccccCccHHHHHHHHHhccccccccccc--chhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEE
Confidence 34456689999999999999999999999888766554 79999999999999999999999999875 6779999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc
Q 014696 91 ACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF 170 (420)
Q Consensus 91 A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (420)
|+..|+.++|++||..|++-..++ ...+|||.+|...|..+||..|+..|...... .....
T Consensus 831 acsggr~~vvelLl~~gankehrn-vsDytPlsla~Sggy~~iI~~llS~GseInSr------------------tgSkl 891 (2131)
T KOG4369|consen 831 ACSGGRTRVVELLLNAGANKEHRN-VSDYTPLSLARSGGYTKIIHALLSSGSEINSR------------------TGSKL 891 (2131)
T ss_pred ecCCCcchHHHHHHHhhccccccc-hhhcCchhhhcCcchHHHHHHHhhcccccccc------------------ccccc
Confidence 999999999999999999877766 47899999999999999999999876443321 22333
Q ss_pred hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc
Q 014696 171 HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 171 ~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 250 (420)
+..++..+..+||.+.++.|++.|-|+|.. ...+-+|+|-+|.-.|..++|.+||.+.+++..+-+.|.|||+-++..
T Consensus 892 gisPLmlatmngh~~at~~ll~~gsdiNaq--IeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~Asg 969 (2131)
T KOG4369|consen 892 GISPLMLATMNGHQAATLSLLQPGSDINAQ--IETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASG 969 (2131)
T ss_pred CcchhhhhhhccccHHHHHHhcccchhccc--cccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcC
Confidence 445666779999999999999999999974 334567899999999999999999999999998999999999999999
Q ss_pred CchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCCCCC
Q 014696 251 HRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDSLST 299 (420)
Q Consensus 251 g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~~~~ 299 (420)
|..++-++|+..+++.. ..+.+... ..++.+..+.|++..+....
T Consensus 970 Gyvdvg~~li~~gad~n-asPvp~T~---dtalti~a~kGh~kfv~~ll 1014 (2131)
T KOG4369|consen 970 GYVDVGNLLIAAGADTN-ASPVPNTW---DTALTIPANKGHTKFVPKLL 1014 (2131)
T ss_pred Cccccchhhhhcccccc-cCCCCCcC---CccceeecCCCchhhhHHhh
Confidence 99999999998887732 22221111 13345666777766655433
No 64
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.81 E-value=4.7e-19 Score=144.22 Aligned_cols=119 Identities=34% Similarity=0.399 Sum_probs=103.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
.-+.+|+..|.+..|+.||+..++... ..+..|.||||.|+.+||.+||+.|+..|++++.+...|+||||-|+..++.
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~vN-trD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANHVN-TRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcccccc-ccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccch
Confidence 468899999999999999998876432 3445568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHH-HHHHHH
Q 014696 98 EVVLTLILYKANIHRADYLNGGTALHLAALNGHSR-CIRLLL 138 (420)
Q Consensus 98 ~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~-iv~~Ll 138 (420)
+++-.||++|++++...+ ...||||+|+...+.. .+++|+
T Consensus 144 ~va~~LLqhgaDVnA~t~-g~ltpLhlaa~~rn~r~t~~~Ll 184 (228)
T KOG0512|consen 144 EVAGRLLQHGADVNAQTK-GLLTPLHLAAGNRNSRDTLELLL 184 (228)
T ss_pred hHHHHHHhccCccccccc-ccchhhHHhhcccchHHHHHHHh
Confidence 999999999999999886 7899999999776554 344444
No 65
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.80 E-value=5e-19 Score=144.08 Aligned_cols=142 Identities=26% Similarity=0.243 Sum_probs=121.0
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHH
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVD-INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSR 132 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~-v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~ 132 (420)
.+.+|+..+.+..|+.||+..++ +|.+|.+|.||||-|+.+|+.+||+.|+.+|++++.+.. .|+||||.|+...+.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~-~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTN-EGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccc-cCccchhhhhcccchh
Confidence 46789999999999999987655 799999999999999999999999999999999999987 9999999999877766
Q ss_pred HHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHH
Q 014696 133 CIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLH 212 (420)
Q Consensus 133 iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh 212 (420)
++- +||++|+|+| .......||||
T Consensus 145 va~-----------------------------------------------------~LLqhgaDVn---A~t~g~ltpLh 168 (228)
T KOG0512|consen 145 VAG-----------------------------------------------------RLLQHGADVN---AQTKGLLTPLH 168 (228)
T ss_pred HHH-----------------------------------------------------HHHhccCccc---ccccccchhhH
Confidence 554 4557889999 66777899999
Q ss_pred HHHHcCCH-HHHHHHHH-hCCCccccccCCCCHHHHHHHcCc
Q 014696 213 YAACGGNA-QCCQILIA-MGASLTAENANGWTPLMVARSWHR 252 (420)
Q Consensus 213 ~Aa~~g~~-~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~ 252 (420)
+|+...+. ..+.+|+. .+.++..++..+.||+++|.+.+-
T Consensus 169 laa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 169 LAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred HhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 99987765 45566654 488888899999999999987653
No 66
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.79 E-value=8.8e-19 Score=134.18 Aligned_cols=89 Identities=39% Similarity=0.555 Sum_probs=80.3
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHH
Q 014696 20 LVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEV 99 (420)
Q Consensus 20 L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~i 99 (420)
||.|++.|+.+++++|++.+.+++. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 7899999999999999998877655 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccc
Q 014696 100 VLTLILYKANIHRAD 114 (420)
Q Consensus 100 v~~Ll~~ga~~~~~~ 114 (420)
+++|+++|++++.+|
T Consensus 75 ~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 75 VKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHTTT-TTSS-
T ss_pred HHHHHHcCCCCCCcC
Confidence 999999999998754
No 67
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.79 E-value=1.1e-19 Score=183.04 Aligned_cols=285 Identities=20% Similarity=0.186 Sum_probs=208.3
Q ss_pred cccccCcccCC--CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc
Q 014696 4 LSIVGNSFGCS--ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN 81 (420)
Q Consensus 4 l~~~g~~~~~~--~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d 81 (420)
|.-.|.+...+ .+-.+|..|+-.||..+|+.|+++.+++....+. .+.|+|.+|+..|..++|++||..|++-..++
T Consensus 776 lv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdr-tkdt~lSlacsggr~~vvelLl~~gankehrn 854 (2131)
T KOG4369|consen 776 LVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDR-TKDTMLSLACSGGRTRVVELLLNAGANKEHRN 854 (2131)
T ss_pred HHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhccc-ccCceEEEecCCCcchHHHHHHHhhccccccc
Confidence 34445555433 5668899999999999999999999888776553 45899999999999999999999999888888
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccc-CCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHh------h
Q 014696 82 YRGQTALMQACQHGHWEVVLTLILYKANIHRADY-LNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLR------K 154 (420)
Q Consensus 82 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~------~ 154 (420)
-...|||.+|...|..++|..|+.+|+.++.+.. ..|-+||++|..+||.+.++.|++.+.+.......... .
T Consensus 855 vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~ 934 (2131)
T KOG4369|consen 855 VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLAL 934 (2131)
T ss_pred hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecc
Confidence 8889999999999999999999999988887643 36888999999999999999999876654332222111 0
Q ss_pred hccCCCCchh-------ccc-ccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHH
Q 014696 155 KSNKTGSILE-------FDE-RYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQIL 226 (420)
Q Consensus 155 ~~~~~~~~~~-------~~~-~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~L 226 (420)
..+....... ... ...+.++++.+|..|.+|+-.+||..|+|+|.. ..-....|+|-+++..||...|..|
T Consensus 935 fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nas-Pvp~T~dtalti~a~kGh~kfv~~l 1013 (2131)
T KOG4369|consen 935 FQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS-PVPNTWDTALTIPANKGHTKFVPKL 1013 (2131)
T ss_pred ccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccC-CCCCcCCccceeecCCCchhhhHHh
Confidence 1111111000 011 122345567779999999999999999999865 3344567888888888888888888
Q ss_pred HHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCC
Q 014696 227 IAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDS 296 (420)
Q Consensus 227 l~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~ 296 (420)
+...|.+..+|++|.|+|.+|+..|+...+.+|+++.++... .+....++.|.++ +.|+-.++.
T Consensus 1014 ln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~--qdnr~~S~~maaf----RKgh~~iVk 1077 (2131)
T KOG4369|consen 1014 LNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQ--QDNRTNSRTMAAF----RKGHFAIVK 1077 (2131)
T ss_pred hCCccceecccCCCCcccchhccCCccccchHHhhcccChhh--hhcccccccHHHH----Hhchhheec
Confidence 888888888888888888888888888888888887766322 2444444555433 344444444
No 68
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.75 E-value=1.2e-17 Score=165.81 Aligned_cols=208 Identities=23% Similarity=0.267 Sum_probs=170.5
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcC---------CCCCCccCCCCCHHHHHHHc---CcHHHHHHHHHcCC----CCCcccc
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESG---------VDINLRNYRGQTALMQACQH---GHWEVVLTLILYKA----NIHRADY 115 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g---------~~v~~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga----~~~~~~~ 115 (420)
+.++..|...+..+.+..|+..+ .+++.+..-|.|.||.|..+ ++.++++.|++.-. ++...+.
T Consensus 102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~ee 181 (782)
T KOG3676|consen 102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEE 181 (782)
T ss_pred hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHh
Confidence 36788888889988888877654 56778888899999999873 45689999998643 3344455
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCC--Cchhcc-cccchhhHHHHHHhcCCHHHHHHHHH
Q 014696 116 LNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTG--SILEFD-ERYFHLEVLLHLTLNGHVESVQLLLD 192 (420)
Q Consensus 116 ~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~l~aa~~g~~~~v~~Ll~ 192 (420)
..|+||||+|+.+.+.++|++|++.+++................. ..-++. .-+++..++-.||-.++.+++++|++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~ 261 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA 261 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence 689999999999999999999999998887776665543322211 111111 23456677778899999999999999
Q ss_pred cCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCC--ccccccCCCCHHHHHHHcCchhHHHHhhhC
Q 014696 193 LGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGAS--LTAENANGWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 193 ~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad--~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
+|||++ .+|..|+|.||.-+..-..++..+++++|++ ...+|..|.|||.+|++.|+.++.+.+++.
T Consensus 262 ~gAd~~---aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 262 HGADPN---AQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCCCC---ccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 999999 8899999999999999999999999999999 888999999999999999999999999988
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.73 E-value=5.8e-18 Score=148.54 Aligned_cols=115 Identities=30% Similarity=0.443 Sum_probs=89.2
Q ss_pred HHHHHcCCHHHHHHHHHh-CCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHH
Q 014696 21 VSAARDGDLQEAKALLEY-NPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEV 99 (420)
Q Consensus 21 ~~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~i 99 (420)
+.-++.||.-.|+..|+. ..+.+.-++ .|-+|||+|++.||..+|+.|+.+|+.+|..|....||||+|+.+||-++
T Consensus 5 f~wcregna~qvrlwld~tehdln~gdd--hgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdi 82 (448)
T KOG0195|consen 5 FGWCREGNAFQVRLWLDDTEHDLNVGDD--HGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDI 82 (448)
T ss_pred hhhhhcCCeEEEEEEecCcccccccccc--cCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHH
Confidence 344566665555555543 333443333 35789999999999999999999999999988888899999999999999
Q ss_pred HHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHH
Q 014696 100 VLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLL 138 (420)
Q Consensus 100 v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll 138 (420)
|+.|+++.+++|..+. .|.||||||+.-|...+.+-|+
T Consensus 83 vqkll~~kadvnavne-hgntplhyacfwgydqiaedli 120 (448)
T KOG0195|consen 83 VQKLLSRKADVNAVNE-HGNTPLHYACFWGYDQIAEDLI 120 (448)
T ss_pred HHHHHHHhcccchhhc-cCCCchhhhhhhcHHHHHHHHH
Confidence 9999999999998886 8999999998887776665555
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.72 E-value=2.2e-16 Score=128.13 Aligned_cols=55 Identities=33% Similarity=0.500 Sum_probs=31.9
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHh
Q 014696 205 GAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDIL 259 (420)
Q Consensus 205 ~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL 259 (420)
..|.||+|+|++.++.+++++|+++|.+++..+..|.||+++|...++.+++++|
T Consensus 71 ~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 71 KDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 3455555555555555555555555555555555556666666655555555554
No 71
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.72 E-value=5.5e-17 Score=124.15 Aligned_cols=85 Identities=45% Similarity=0.624 Sum_probs=78.8
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHH
Q 014696 55 LHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCI 134 (420)
Q Consensus 55 Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv 134 (420)
||+|+++|+.+++++|++.+.+++. |.||||+|+.+|+.+++++|+++|++++..+. .|+||||+|+.+|+.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDK-NGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BST-TSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCC-CCCCHHHHHHHcCCHHHH
Confidence 7999999999999999999988887 88999999999999999999999999999985 999999999999999999
Q ss_pred HHHHHhcCCC
Q 014696 135 RLLLADYIPS 144 (420)
Q Consensus 135 ~~Ll~~~~~~ 144 (420)
++|++++...
T Consensus 76 ~~Ll~~g~~~ 85 (89)
T PF12796_consen 76 KLLLEHGADV 85 (89)
T ss_dssp HHHHHTTT-T
T ss_pred HHHHHcCCCC
Confidence 9999886543
No 72
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.3e-17 Score=144.78 Aligned_cols=138 Identities=32% Similarity=0.432 Sum_probs=114.7
Q ss_pred HHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhh
Q 014696 69 LLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNA 148 (420)
Q Consensus 69 ~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~ 148 (420)
||=+..-|.|.-|..|.+|||+|++.|+..+|+.|+..|+.+|..+- ...||||+|+.+||-++|+.|+
T Consensus 19 wld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnm-gddtplhlaaahghrdivqkll---------- 87 (448)
T KOG0195|consen 19 WLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNM-GDDTPLHLAAAHGHRDIVQKLL---------- 87 (448)
T ss_pred EecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccC-CCCcchhhhhhcccHHHHHHHH----------
Confidence 33344668899999999999999999999999999999999998874 6789999999988887776666
Q ss_pred HHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHH
Q 014696 149 WNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIA 228 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~ 228 (420)
+..+|+| ..+..|.||||||+-.|...+.+-|+.
T Consensus 88 -------------------------------------------~~kadvn---avnehgntplhyacfwgydqiaedli~ 121 (448)
T KOG0195|consen 88 -------------------------------------------SRKADVN---AVNEHGNTPLHYACFWGYDQIAEDLIS 121 (448)
T ss_pred -------------------------------------------HHhcccc---hhhccCCCchhhhhhhcHHHHHHHHHh
Confidence 4567888 778899999999999999999999999
Q ss_pred hCCCccccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 229 MGASLTAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 229 ~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
.||.++..|++|.|||..|----...+.++-.+.+
T Consensus 122 ~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~g 156 (448)
T KOG0195|consen 122 CGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHG 156 (448)
T ss_pred ccceeeecccCCCCchhhhchHHHHHHHHHHHHhC
Confidence 99999999999999999885433333333333333
No 73
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.69 E-value=2.4e-16 Score=114.91 Aligned_cols=104 Identities=23% Similarity=0.341 Sum_probs=92.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
..+.+++++|.++.|+..+..+-+++... .|++|||||+..|..+++++|+..|++++.+|++|-|||.-|+..||.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~---ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~ 80 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY---GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHR 80 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh---CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhH
Confidence 56899999999999999999886555433 469999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCChHHHHH
Q 014696 98 EVVLTLILYKANIHRADYLNGGTALHLA 125 (420)
Q Consensus 98 ~iv~~Ll~~ga~~~~~~~~~g~tpL~~A 125 (420)
++|++|++.|++-..... .|.+.+..+
T Consensus 81 ~cVklLL~~GAdrt~~~P-dG~~~~eat 107 (117)
T KOG4214|consen 81 DCVKLLLQNGADRTIHAP-DGTALIEAT 107 (117)
T ss_pred HHHHHHHHcCcccceeCC-CchhHHhhc
Confidence 999999999999877765 677665443
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.68 E-value=5.2e-16 Score=154.33 Aligned_cols=188 Identities=27% Similarity=0.307 Sum_probs=155.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCC-------CcccccCCCCCCcHHHHHHH---cCcHHHHHHHHHcCCC-CC----CccC
Q 014696 18 ERLVSAARDGDLQEAKALLEYNP-------RLVRYSTFGVRNSPLHYSAA---QGHHEIVSLLIESGVD-IN----LRNY 82 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~-------~~~~~~~~~~g~t~Lh~Aa~---~g~~~iv~~Ll~~g~~-v~----~~d~ 82 (420)
++++.|...|.++....|+.... +.........|.|.||.|.. .++.++++.|++.-.. +| ...+
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 67888999999998888887652 33444445578999999998 4667999999985211 12 1246
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccc----------------------CCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 83 RGQTALMQACQHGHWEVVLTLILYKANIHRADY----------------------LNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 83 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~----------------------~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
.|+||||+|+.+.+.++|++|++.|||++.+-. ..|..||.+||--++.+|+++|+++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 799999999999999999999999999885321 2588999999999999999999987
Q ss_pred cCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHH-HhcCCHHHHHHHHHcCCC--cccccccCCCCccHHHHHHHc
Q 014696 141 YIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHL-TLNGHVESVQLLLDLGAS--VSEYLSVSGAGSTSLHYAACG 217 (420)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a-a~~g~~~~v~~Ll~~ga~--~~~~~~~~~~g~TpLh~Aa~~ 217 (420)
+ .+.+.++..+.+.+|+ +..-..++..+++++|++ .. ..+..|-|||.+|++.
T Consensus 263 g---------------------Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~---v~N~qgLTPLtLAakl 318 (782)
T KOG3676|consen 263 G---------------------ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEH---VRNNQGLTPLTLAAKL 318 (782)
T ss_pred C---------------------CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccCCCChHHHHHHh
Confidence 4 4455677788999999 888899999999999999 44 7788999999999999
Q ss_pred CCHHHHHHHHHh
Q 014696 218 GNAQCCQILIAM 229 (420)
Q Consensus 218 g~~~iv~~Ll~~ 229 (420)
|..++.+.+++.
T Consensus 319 Gk~emf~~ile~ 330 (782)
T KOG3676|consen 319 GKKEMFQHILER 330 (782)
T ss_pred hhHHHHHHHHHh
Confidence 999999999997
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.67 E-value=1.6e-15 Score=123.06 Aligned_cols=121 Identities=40% Similarity=0.557 Sum_probs=110.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++|+.|+..|+.+++++|++.+...+. .+..|.||||+|+..++.+++++|++.|++++..+..|.||+|+|+..
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~--~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADVNA--KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 456899999999999999999999987643 334568999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLL 138 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll 138 (420)
++.+++++|++.+.+++..+. .|.||+++|...++.+++++|+
T Consensus 84 ~~~~~~~~L~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 84 GNLDVVKLLLKHGADVNARDK-DGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CcHHHHHHHHHcCCCCcccCC-CCCCHHHHHHhcCCHHHHHHhC
Confidence 999999999999999888885 8999999999999999999874
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.58 E-value=3.9e-14 Score=127.38 Aligned_cols=88 Identities=39% Similarity=0.569 Sum_probs=53.6
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc-----HHHHHHHHHcCC--CCCccccCCCChHHH
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH-----WEVVLTLILYKA--NIHRADYLNGGTALH 123 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~-----~~iv~~Ll~~ga--~~~~~~~~~g~tpL~ 123 (420)
+.+++|.++..+..+++++|++.|++++.+|..|.||||+|+..++ .++++.|++.|+ +.....+..|.||||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~ 152 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH 152 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence 3566666666666666666666666666666666666666666666 666666666666 333332236666666
Q ss_pred HHHHcCCHHHHHHHH
Q 014696 124 LAALNGHSRCIRLLL 138 (420)
Q Consensus 124 ~A~~~g~~~iv~~Ll 138 (420)
+|+..|+.+++++|+
T Consensus 153 ~A~~~~~~~~~~~ll 167 (235)
T COG0666 153 WAALNGDADIVELLL 167 (235)
T ss_pred HHHHcCchHHHHHHH
Confidence 666665555544444
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.58 E-value=1.2e-13 Score=124.24 Aligned_cols=137 Identities=34% Similarity=0.489 Sum_probs=118.7
Q ss_pred CCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhh
Q 014696 76 DINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKK 155 (420)
Q Consensus 76 ~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 155 (420)
.....+..+.++++.|+..+..+++++++..|++++..+. .|.||||+|+..++.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~g~t~l~~a~~~~~~------------------------ 119 (235)
T COG0666 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDA-DGDTPLHLAALNGNP------------------------ 119 (235)
T ss_pred ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccC-CCCcHHHHHHhcCCc------------------------
Confidence 3455667789999999999999999999999999988775 999999999999884
Q ss_pred ccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCC--CcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 156 SNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGA--SVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga--~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
..++.+++++|++.|+ +... ..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 120 ------------------------~~~~~~~~~~ll~~g~~~~~~~--~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~ 173 (235)
T COG0666 120 ------------------------PEGNIEVAKLLLEAGADLDVNN--LRDEDGNTPLHWAALNGDADIVELLLEAGADP 173 (235)
T ss_pred ------------------------ccchHHHHHHHHHcCCCCCCcc--ccCCCCCchhHHHHHcCchHHHHHHHhcCCCC
Confidence 1244555666666777 3332 56889999999999999999999999999999
Q ss_pred cccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 234 TAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 234 ~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
+.++..|.|+++.|...++.++++.+...+
T Consensus 174 ~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 174 NSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred cccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 999999999999999999999999999875
No 78
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.54 E-value=4.6e-14 Score=103.06 Aligned_cols=88 Identities=28% Similarity=0.406 Sum_probs=69.5
Q ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHH
Q 014696 53 SPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSR 132 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~ 132 (420)
--+.|++++|.++-|+..+..|.++|..- .|+||||||+..|+.+++++|+..|++++.+|+ .|-|||..|+..||.+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDK-ygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDK-YGITPLLSAVWEGHRD 81 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccc-cCCcHHHHHHHHhhHH
Confidence 34667888888888888888887777653 788888888888888888888888888888886 8888888888888877
Q ss_pred HHHHHHHhcC
Q 014696 133 CIRLLLADYI 142 (420)
Q Consensus 133 iv~~Ll~~~~ 142 (420)
+|++|+++|+
T Consensus 82 cVklLL~~GA 91 (117)
T KOG4214|consen 82 CVKLLLQNGA 91 (117)
T ss_pred HHHHHHHcCc
Confidence 7777776543
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.53 E-value=2.6e-14 Score=98.07 Aligned_cols=54 Identities=41% Similarity=0.684 Sum_probs=42.2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHH
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLI 104 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll 104 (420)
|+||||+|+..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 578899999999999999999888888888888999999999999988888886
No 80
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.50 E-value=1.8e-13 Score=120.51 Aligned_cols=122 Identities=29% Similarity=0.313 Sum_probs=109.3
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINL-RNYRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~-~d~~g~TpL~~A~~ 93 (420)
+...+|+.++..|+.+.+..||+.-..++..+ ..|.|+|..|+.+|+.++|++|++.|+|+|. ++..+.||||+|+.
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D--~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVRQVNQRD--PSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhhhhhccC--CCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 45579999999999999999999865555544 4569999999999999999999999999986 45678999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHH
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLA 139 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~ 139 (420)
.|+.++.++|++.|+.....+. -|+|+-.+|+.-|+.++|..+-.
T Consensus 89 SGn~dvcrllldaGa~~~~vNs-vgrTAaqmAAFVG~H~CV~iINN 133 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMYLVNS-VGRTAAQMAAFVGHHECVAIINN 133 (396)
T ss_pred cCCchHHHHHHhccCccccccc-hhhhHHHHHHHhcchHHHHHHhc
Confidence 9999999999999999998886 89999999999999999988753
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.50 E-value=1.8e-14 Score=99.42 Aligned_cols=55 Identities=38% Similarity=0.577 Sum_probs=33.2
Q ss_pred HHHcC-CCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 190 LLDLG-ASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 190 Ll~~g-a~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
||++| ++++ .+|..|.||||+|+..|+.++|++|+++|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n---~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVN---AQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT------TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCc---CcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 57777 7777 7899999999999999999999999999999999999999999997
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.47 E-value=1e-13 Score=95.06 Aligned_cols=54 Identities=33% Similarity=0.525 Sum_probs=46.4
Q ss_pred CccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhh
Q 014696 207 GSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILS 260 (420)
Q Consensus 207 g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~ 260 (420)
|+||||+|++.|+.+++++|+++|+|++.+|.+|+||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999999999999999999999999999999999985
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=2.3e-13 Score=128.63 Aligned_cols=119 Identities=24% Similarity=0.278 Sum_probs=103.9
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHH
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWE 98 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~ 98 (420)
-|..|+..|.+++|+..+..-.+....++ .|-|+||-|+-.||.+||++|++.|++||..|.+||||||.|+..++..
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNd--EGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPND--EGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCc--cchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 47889999999999999987766655444 4589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccccCCCChHHHHH--HHcCCHHHHHHHHH
Q 014696 99 VVLTLILYKANIHRADYLNGGTALHLA--ALNGHSRCIRLLLA 139 (420)
Q Consensus 99 iv~~Ll~~ga~~~~~~~~~g~tpL~~A--~~~g~~~iv~~Ll~ 139 (420)
+++.|++.|+-+....-.++.|+..-. ...|..+|.+||..
T Consensus 631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 999999999998877766788887665 35688899999973
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.45 E-value=7.6e-14 Score=96.30 Aligned_cols=55 Identities=40% Similarity=0.523 Sum_probs=23.7
Q ss_pred HHHcC-CCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHH
Q 014696 70 LIESG-VDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLA 125 (420)
Q Consensus 70 Ll~~g-~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A 125 (420)
||++| ++++.+|..|+||||+|+.+|+.++|++|++.|++++.++. .|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~-~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDK-DGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---T-TS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcC-CCCCHHHhC
Confidence 45555 66666677777777777777777777777766777766665 667777665
No 85
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.45 E-value=6.3e-13 Score=117.10 Aligned_cols=87 Identities=28% Similarity=0.324 Sum_probs=62.0
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCH
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHS 131 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~ 131 (420)
.+||.-++.+|+.+-...||..--.+|.+|..|.|+|..|+..|+.++|++|++.|+|+|......++||||+|+..|+.
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~ 92 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ 92 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence 46777777788877777777765567777777888888888888888888888777777766555566666666666555
Q ss_pred HHHHHHH
Q 014696 132 RCIRLLL 138 (420)
Q Consensus 132 ~iv~~Ll 138 (420)
++.++|+
T Consensus 93 dvcrlll 99 (396)
T KOG1710|consen 93 DVCRLLL 99 (396)
T ss_pred hHHHHHH
Confidence 5444444
No 86
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.44 E-value=7.2e-13 Score=137.44 Aligned_cols=86 Identities=36% Similarity=0.503 Sum_probs=66.0
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHH
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRC 133 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~i 133 (420)
.|+.|+..|+.+.+++|++.|+++|.+|..|+||||+|+.+|+.+++++|+++|++++..+. .|.||||+|+..|+.++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~-~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK-DGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHCCcHHH
Confidence 36777777888888877777777777777778888888888888888888877777777775 77778877777777777
Q ss_pred HHHHHHh
Q 014696 134 IRLLLAD 140 (420)
Q Consensus 134 v~~Ll~~ 140 (420)
+++|+++
T Consensus 164 v~~Ll~~ 170 (664)
T PTZ00322 164 VQLLSRH 170 (664)
T ss_pred HHHHHhC
Confidence 7777643
No 87
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.44 E-value=6.1e-13 Score=137.95 Aligned_cols=106 Identities=29% Similarity=0.323 Sum_probs=94.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
..|+.|+..|+.+.++.|++.+++++..+. .|+||||+|+.+|+.+++++|+++|++++.+|..|.||||+|+.+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~--~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDY--DGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 358999999999999999999998876544 569999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCCCCccccCCCChHHHHHH
Q 014696 98 EVVLTLILY-------KANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 98 ~iv~~Ll~~-------ga~~~~~~~~~g~tpL~~A~ 126 (420)
+++++|+++ |++.+..+. .|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~~~~-~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKPDSF-TGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCcccc-CCCCccchhh
Confidence 999999998 888776664 6777765543
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=2.3e-12 Score=122.07 Aligned_cols=91 Identities=30% Similarity=0.482 Sum_probs=84.1
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCch
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRT 253 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 253 (420)
.+|.|+..|.+++|+..+..-.|+. ..+..|.|+||.|+..||.+||++|++.|+++|+.|.+||||||.|+.-++.
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpS---qpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPS---QPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV 629 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCC---CCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch
Confidence 3566799999999999998877877 6678999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhCCCCcc
Q 014696 254 GLEDILSTQPEGRL 267 (420)
Q Consensus 254 ~i~~lL~~~~~~~~ 267 (420)
.+.+.|.+.++...
T Consensus 630 ~~ckqLVe~Gaavf 643 (752)
T KOG0515|consen 630 PMCKQLVESGAAVF 643 (752)
T ss_pred HHHHHHHhccceEE
Confidence 99999999988643
No 89
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.95 E-value=3.5e-09 Score=101.50 Aligned_cols=121 Identities=24% Similarity=0.290 Sum_probs=109.3
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCC--CCCccCCCCCHHHHHHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVD--INLRNYRGQTALMQACQ 93 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~--v~~~d~~g~TpL~~A~~ 93 (420)
-++.+..|+..+|+-.++.....+.++..+..+. .|.||||+..|+-++|+|+|++|.. ++..|..|.|+||.|+-
T Consensus 866 iseeil~av~~~D~~klqE~h~~gg~ll~~~~~~--~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 866 ISEEILRAVLSSDLMKLQETHLNGGSLLIQGPDH--CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred ccHHHHHHHHhccHHHHHHHHhcCCceEeeCcch--hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 4567999999999999988888888887766655 7999999999999999999999854 57778999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHH
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLA 139 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~ 139 (420)
.++-.+.++|++.|+.+...|. .|.||-..|-..|+.+...||-.
T Consensus 944 ~~~r~vc~~lvdagasl~ktd~-kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAGASLRKTDS-KGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred hcchHHHHHHHhcchhheeccc-CCCChHHHHHhcCCchHHHHHhh
Confidence 9999999999999999999887 99999999999999999999864
No 90
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.93 E-value=1.1e-09 Score=103.04 Aligned_cols=90 Identities=28% Similarity=0.320 Sum_probs=83.6
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCccccCCCChHHHHHHHc
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILY-KANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.+.-.+++|++.|++..++.+.-.|.|++.+|++.+|+||.|+..|+.+++++|++. +.+++.+|. +|+|||.-|...
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDR-w~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDR-WGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhc-cCCCcchHhHhc
Confidence 345689999999999999999999999999999999999999999999999999986 788888886 999999999999
Q ss_pred CCHHHHHHHHHh
Q 014696 129 GHSRCIRLLLAD 140 (420)
Q Consensus 129 g~~~iv~~Ll~~ 140 (420)
+|.+++++|-+.
T Consensus 584 ~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 584 KHKEVVKLLEEA 595 (622)
T ss_pred CcHHHHHHHHHH
Confidence 999999999864
No 91
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.91 E-value=4.1e-09 Score=99.57 Aligned_cols=86 Identities=31% Similarity=0.403 Sum_probs=77.6
Q ss_pred HHHHH-HhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCc
Q 014696 174 VLLHL-TLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHR 252 (420)
Q Consensus 174 ~~l~a-a~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 252 (420)
--+|+ ++.|+.+..-.||..||++|.. -...|.||||.|++.|+.--+++|+=+|||++..|.+|.||+.||...||
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~--hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFF--HPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCC--CcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 35677 9999999999999999999974 34579999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhh
Q 014696 253 TGLEDILST 261 (420)
Q Consensus 253 ~~i~~lL~~ 261 (420)
.++.+-|.+
T Consensus 213 ~~laeRl~e 221 (669)
T KOG0818|consen 213 HELAERLVE 221 (669)
T ss_pred hHHHHHHHH
Confidence 888776654
No 92
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.88 E-value=1.5e-09 Score=108.22 Aligned_cols=100 Identities=17% Similarity=0.239 Sum_probs=83.5
Q ss_pred CCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCC-CCCHHHHHHHcCcHHHHHHHHH
Q 014696 27 GDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYR-GQTALMQACQHGHWEVVLTLIL 105 (420)
Q Consensus 27 g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~-g~TpL~~A~~~g~~~iv~~Ll~ 105 (420)
|...-++.++++...-.....+..|+|+||+|+..|..++++||+++|+|++.+|+. |+||||-|+.+|++|++-+||.
T Consensus 28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~ 107 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLS 107 (1267)
T ss_pred CChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHh
Confidence 333335555554322224445567899999999999999999999999999999975 9999999999999999999999
Q ss_pred cCCCCCccccCCCChHHHHHHH
Q 014696 106 YKANIHRADYLNGGTALHLAAL 127 (420)
Q Consensus 106 ~ga~~~~~~~~~g~tpL~~A~~ 127 (420)
+|+.....|. .|.+||.+-.+
T Consensus 108 ~g~SL~i~Dk-eglsplq~~~r 128 (1267)
T KOG0783|consen 108 KGRSLRIKDK-EGLSPLQFLSR 128 (1267)
T ss_pred cCCceEEecc-cCCCHHHHHhh
Confidence 9999999997 99999998876
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.88 E-value=2.1e-09 Score=101.03 Aligned_cols=90 Identities=29% Similarity=0.319 Sum_probs=82.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCc
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
-.+++|++.||+..++.+.-.+.++...+.+. +|+||.||..|+++++++|++. +++++.+|.+|+|||.-|...+|
T Consensus 508 i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~--RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h 585 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQGMDLETKDYDD--RTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH 585 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHhccccccccccc--chhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence 47999999999999999999998887766555 8999999999999999999986 89999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 014696 97 WEVVLTLILYKAN 109 (420)
Q Consensus 97 ~~iv~~Ll~~ga~ 109 (420)
.+++++|-+.-..
T Consensus 586 ~~v~k~L~~~~~~ 598 (622)
T KOG0506|consen 586 KEVVKLLEEAQYP 598 (622)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999876443
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.86 E-value=1e-08 Score=96.96 Aligned_cols=88 Identities=28% Similarity=0.352 Sum_probs=68.3
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 17 GERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
+..||..++.|+++..-.||..|++.|.+..+. |.||||.|++.|+.--+++|+-.|+|++..|..|.||+.+|-..||
T Consensus 134 srQLhasvRt~nlet~LRll~lGA~~N~~hpek-g~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 134 SKQLHSSVRTGNLETCLRLLSLGAQANFFHPEK-GNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHHHhhcccHHHHHHHHHcccccCCCCccc-CCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 356888888888888888888888777665543 6788888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHH
Q 014696 97 WEVVLTLIL 105 (420)
Q Consensus 97 ~~iv~~Ll~ 105 (420)
-++.+.|++
T Consensus 213 ~~laeRl~e 221 (669)
T KOG0818|consen 213 HELAERLVE 221 (669)
T ss_pred hHHHHHHHH
Confidence 777776664
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.84 E-value=4.2e-09 Score=62.08 Aligned_cols=30 Identities=40% Similarity=0.624 Sum_probs=27.9
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHhCCCccc
Q 014696 206 AGSTSLHYAACGGNAQCCQILIAMGASLTA 235 (420)
Q Consensus 206 ~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~ 235 (420)
+|+||||+|++.|+.++|++|+++|+|+|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999999873
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=98.81 E-value=6e-09 Score=61.39 Aligned_cols=28 Identities=50% Similarity=0.862 Sum_probs=18.2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDIN 78 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~ 78 (420)
|+||||+|+..|+.++|++|+++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 4566666666666666666666666665
No 97
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.80 E-value=7.8e-09 Score=62.71 Aligned_cols=33 Identities=36% Similarity=0.648 Sum_probs=30.9
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHhCCCcccccc
Q 014696 206 AGSTSLHYAACGGNAQCCQILIAMGASLTAENA 238 (420)
Q Consensus 206 ~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 238 (420)
+|.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998874
No 98
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.78 E-value=1.9e-08 Score=96.77 Aligned_cols=91 Identities=34% Similarity=0.402 Sum_probs=42.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCc--ccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRL--VRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
..|..|+...|+..+-.||.++... +....++.|+|+||+|+..|++.+.++|+=+|+|+-.+|.+|+|+|.||-+.|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence 3444455555555555555444322 22223333445555555555555555555445555555555555555555555
Q ss_pred cHHHHHHHHHcCC
Q 014696 96 HWEVVLTLILYKA 108 (420)
Q Consensus 96 ~~~iv~~Ll~~ga 108 (420)
..+++..|+++|.
T Consensus 706 sqec~d~llq~gc 718 (749)
T KOG0705|consen 706 SQECIDVLLQYGC 718 (749)
T ss_pred cHHHHHHHHHcCC
Confidence 5555555554443
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.75 E-value=1.4e-08 Score=61.61 Aligned_cols=31 Identities=55% Similarity=0.998 Sum_probs=21.7
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRN 81 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d 81 (420)
|+||||+|+.+|+.+++++|+++|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 4677777777777777777777777776665
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.72 E-value=4.9e-08 Score=93.76 Aligned_cols=122 Identities=27% Similarity=0.353 Sum_probs=95.9
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc
Q 014696 89 MQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER 168 (420)
Q Consensus 89 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
..|+..+.+--++.+...|.++..++. +..|.||+|+..|+-++|+||++++.+
T Consensus 871 l~av~~~D~~klqE~h~~gg~ll~~~~-~~~sllh~a~~tg~~eivkyildh~p~------------------------- 924 (1004)
T KOG0782|consen 871 LRAVLSSDLMKLQETHLNGGSLLIQGP-DHCSLLHYAAKTGNGEIVKYILDHGPS------------------------- 924 (1004)
T ss_pred HHHHHhccHHHHHHHHhcCCceEeeCc-chhhHHHHHHhcCChHHHHHHHhcCCH-------------------------
Confidence 445555554445555566777777775 778888888888888888888876321
Q ss_pred cchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHH
Q 014696 169 YFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVAR 248 (420)
Q Consensus 169 ~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 248 (420)
+ ||+ ..+..|.|+||-|+..++-.++++|++.||.+...|..|.||-.-|-
T Consensus 925 ----------------e----lld---------~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraq 975 (1004)
T KOG0782|consen 925 ----------------E----LLD---------MADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQ 975 (1004)
T ss_pred ----------------H----HHH---------HHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHH
Confidence 1 111 33457999999999999999999999999999999999999999999
Q ss_pred HcCchhHHHHhhhCCCC
Q 014696 249 SWHRTGLEDILSTQPEG 265 (420)
Q Consensus 249 ~~g~~~i~~lL~~~~~~ 265 (420)
+.|..++..+|......
T Consensus 976 qa~d~dlaayle~rq~y 992 (1004)
T KOG0782|consen 976 QAGDPDLAAYLESRQNY 992 (1004)
T ss_pred hcCCchHHHHHhhhhch
Confidence 99999999999765443
No 101
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=98.71 E-value=1.2e-08 Score=68.39 Aligned_cols=47 Identities=36% Similarity=0.810 Sum_probs=39.4
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
+.|.+|++....++..||||. +|..|+..+... ...||+||++|.++
T Consensus 3 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~------------~~~CP~Cr~~i~~V 50 (50)
T PF13920_consen 3 EECPICFENPRDVVLLPCGHLCFCEECAERLLKR------------KKKCPICRQPIESV 50 (50)
T ss_dssp SB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHHT------------TSBBTTTTBB-SEE
T ss_pred CCCccCCccCCceEEeCCCChHHHHHHhHHhccc------------CCCCCcCChhhcCC
Confidence 579999999999999999999 999999988762 34599999999864
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.69 E-value=6.2e-08 Score=93.38 Aligned_cols=98 Identities=29% Similarity=0.263 Sum_probs=83.5
Q ss_pred hhHHHHHHhcCCHHHHHHHHHcCCCcccc-cccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc
Q 014696 172 LEVLLHLTLNGHVESVQLLLDLGASVSEY-LSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 172 ~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~-~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 250 (420)
+.-++.|....++..+-+||.+|-..... ...+++|+|+||+|++.|++.+.++|+=+|+|+..+|.+|+|+|.||.+.
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 44577788888899999999998644322 13456789999999999999999999999999999999999999999999
Q ss_pred CchhHHHHhhhCCCCcccc
Q 014696 251 HRTGLEDILSTQPEGRLEV 269 (420)
Q Consensus 251 g~~~i~~lL~~~~~~~~~~ 269 (420)
|..+++..|++++-.+.-.
T Consensus 705 ~sqec~d~llq~gcp~e~~ 723 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPDECG 723 (749)
T ss_pred ccHHHHHHHHHcCCCcccc
Confidence 9999999999998764433
No 103
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.67 E-value=1.9e-08 Score=100.65 Aligned_cols=65 Identities=29% Similarity=0.326 Sum_probs=62.1
Q ss_pred CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhc
Q 014696 77 INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADY 141 (420)
Q Consensus 77 v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~ 141 (420)
.|+.|..|+|+||+|+..+..++++||+++|++++.+|...|+||||-|+..|+++++-+||.+|
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g 109 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG 109 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcC
Confidence 68899999999999999999999999999999999999999999999999999999999999764
No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.64 E-value=8.9e-08 Score=91.82 Aligned_cols=90 Identities=22% Similarity=0.285 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
.+||.++...+.+.+..++...........+..|+||||+|+..||.+.++.|+.+|+++..+|..|++|||.|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 35888888888888877666554444444445568999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHcC
Q 014696 98 EVVLTLILYK 107 (420)
Q Consensus 98 ~iv~~Ll~~g 107 (420)
+++..++.+.
T Consensus 102 q~i~~vlr~~ 111 (560)
T KOG0522|consen 102 QIITEVLRHL 111 (560)
T ss_pred HHHHHHHHHh
Confidence 8887777643
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.59 E-value=2.4e-07 Score=93.80 Aligned_cols=123 Identities=20% Similarity=0.199 Sum_probs=103.9
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCC--cccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPR--LVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQA 91 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A 91 (420)
+.++..+..|+..||.-.|+..++.... ++....+.-|+++|+.|+.+.+.+++++|++++..+ ..+|.+|
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~a 95 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLA 95 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHH
Confidence 4667899999999999999999997655 777777888999999999999999999999996655 4599999
Q ss_pred HHcCcHHHHHHHHHcCCCC---------CccccCCCChHHHHHHHcCCHHHHHHHHHhcCC
Q 014696 92 CQHGHWEVVLTLILYKANI---------HRADYLNGGTALHLAALNGHSRCIRLLLADYIP 143 (420)
Q Consensus 92 ~~~g~~~iv~~Ll~~ga~~---------~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 143 (420)
+..|..++|+.++.+.... +......+-|||.+||..++.||++.|+.++..
T Consensus 96 I~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 96 IAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC 156 (822)
T ss_pred HHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence 9999999999999874332 111223578999999999999999999987663
No 106
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.57 E-value=4.1e-07 Score=87.38 Aligned_cols=89 Identities=24% Similarity=0.316 Sum_probs=78.7
Q ss_pred cHHHHHHHcCcHHHHHHHHH--cCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 53 SPLHYSAAQGHHEIVSLLIE--SGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~--~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
-|||+++.....+-+..++. .+..++.+|..|.||||+|+..|+.+.++.|+..|+++..+++ .|++|||-|+..|+
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~-~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNN-EGWSPLHEAVSTGN 100 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCcccccc-ccccHHHHHHHcCC
Confidence 35999999988877766443 3567899999999999999999999999999999999999987 99999999999999
Q ss_pred HHHHHHHHHhcC
Q 014696 131 SRCIRLLLADYI 142 (420)
Q Consensus 131 ~~iv~~Ll~~~~ 142 (420)
.+++..++.+..
T Consensus 101 ~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 101 EQIITEVLRHLK 112 (560)
T ss_pred HHHHHHHHHHhH
Confidence 999999987643
No 107
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.50 E-value=2.6e-07 Score=93.59 Aligned_cols=128 Identities=23% Similarity=0.234 Sum_probs=96.7
Q ss_pred cHHHHHHHcCcHHHHHHHHHc----CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 53 SPLHYSAAQGHHEIVSLLIES----GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~~----g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
--...|+.+|+...|+..++. ..++|..|.-|+++|+.|+.+.+.+++++|+++.... ..+|.+|+..
T Consensus 27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~ 98 (822)
T KOG3609|consen 27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAV 98 (822)
T ss_pred HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHH
Confidence 456689999999999988874 2567888999999999999999999999999877554 3589999999
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
|..++|++++.+......... .+ +.+. .....+.
T Consensus 99 ~~v~~VE~ll~~~~~~~~~~~-------------------------------------------~~-d~~~--~~ft~di 132 (822)
T KOG3609|consen 99 GSVPLVELLLVHFVDAPYLER-------------------------------------------SG-DANS--PHFTPDI 132 (822)
T ss_pred HHHHHHHHHHhcccccchhcc-------------------------------------------cc-ccCc--ccCCCCc
Confidence 999999999976322110000 00 1110 2233578
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCcc
Q 014696 209 TSLHYAACGGNAQCCQILIAMGASLT 234 (420)
Q Consensus 209 TpLh~Aa~~g~~~iv~~Ll~~gad~~ 234 (420)
|||++||..++.||++.|+++|+.+-
T Consensus 133 tPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred cHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 99999999999999999999998764
No 108
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.32 E-value=6.6e-07 Score=93.11 Aligned_cols=109 Identities=24% Similarity=0.276 Sum_probs=91.8
Q ss_pred HHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q 014696 29 LQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKA 108 (420)
Q Consensus 29 ~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 108 (420)
...+..=+..+.+.+.......|.|+||.|+..|..-++++|+++|+++|..|..|+||||.+...|+...+..|++.|+
T Consensus 634 ~~~~~~~~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a 713 (785)
T KOG0521|consen 634 LPRIATALAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGA 713 (785)
T ss_pred hhhhhhhhcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccc
Confidence 33333333444555554444557899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCChHHHHHHHcCCHHHHHHHH
Q 014696 109 NIHRADYLNGGTALHLAALNGHSRCIRLLL 138 (420)
Q Consensus 109 ~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll 138 (420)
+.+..+. .|.+||++|....+.+++-++.
T Consensus 714 ~~~a~~~-~~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 714 DPNAFDP-DGKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cccccCc-cCcchhhHHhhhccccHHHHHh
Confidence 9999997 9999999998887777776665
No 109
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=9.9e-08 Score=61.86 Aligned_cols=50 Identities=32% Similarity=0.648 Sum_probs=41.3
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
|+|.+|.+.+-.-+.--|||. +|-.|.+.+... +.-.||+||++|..+.|
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~~~-----------~~g~CPiCRapi~dvIk 58 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLKKA-----------LHGCCPICRAPIKDVIK 58 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHHHc-----------cCCcCcchhhHHHHHHH
Confidence 899999999888888889999 999999888632 34469999988877655
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.24 E-value=2.8e-06 Score=71.18 Aligned_cols=68 Identities=16% Similarity=0.180 Sum_probs=62.6
Q ss_pred CCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC-CCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 195 ASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG-ASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 195 a~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.++| .+|..|+|+|+.|+..|+.+.|.+|+.+| +++...|..|.+++.+|-+.|..++++.|.++...
T Consensus 3 ~~in---~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 3 GNIN---ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCcc---chhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 4566 78889999999999999999999999999 99999999999999999999999999999987443
No 111
>KOG4265 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=7.2e-07 Score=82.10 Aligned_cols=51 Identities=29% Similarity=0.686 Sum_probs=43.6
Q ss_pred CCCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
-..|+||+....+++..||+|. +|..|+..|=.. ...||+||++|.++.++
T Consensus 290 gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q------------~n~CPICRqpi~~ll~i 341 (349)
T KOG4265|consen 290 GKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQ------------TNNCPICRQPIEELLEI 341 (349)
T ss_pred CCeeEEEecCCcceEEecchhhehhHhHHHHHHHh------------hcCCCccccchHhhhee
Confidence 4579999999999999999999 999999888522 23499999999999765
No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.19 E-value=7e-06 Score=75.77 Aligned_cols=73 Identities=30% Similarity=0.365 Sum_probs=56.6
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
-|.+|++.|+.+.|++|++.|.++|.+|.....||.+|+..||.++|++|+++|+--.. +...|..++ +++.+
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~r-dtf~G~RC~-YgaLn 111 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSR-DTFDGDRCH-YGALN 111 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccc-cccCcchhh-hhhhh
Confidence 57788888888888888888888888888888888888888888888888888875443 334666554 44443
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.16 E-value=1.4e-06 Score=90.73 Aligned_cols=81 Identities=28% Similarity=0.382 Sum_probs=70.1
Q ss_pred HhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHH
Q 014696 179 TLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDI 258 (420)
Q Consensus 179 a~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~l 258 (420)
+..+...++++|+++|+++| ..+..|+||||.+...|+...+..|+++|++.++.+.+|++|+++|....+.+++-+
T Consensus 664 ~~~~~~~~~e~ll~~ga~vn---~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l 740 (785)
T KOG0521|consen 664 VGTGDSGAVELLLQNGADVN---ALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLL 740 (785)
T ss_pred hccchHHHHHHHHhcCCcch---hhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHHH
Confidence 55556666777788999999 788899999999999999999999999999999999999999999988877777666
Q ss_pred hhhC
Q 014696 259 LSTQ 262 (420)
Q Consensus 259 L~~~ 262 (420)
+.-.
T Consensus 741 ~~l~ 744 (785)
T KOG0521|consen 741 LRLA 744 (785)
T ss_pred Hhhh
Confidence 5443
No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.11 E-value=6.7e-06 Score=68.97 Aligned_cols=65 Identities=31% Similarity=0.255 Sum_probs=40.4
Q ss_pred CCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCccccCCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 75 VDINLRNYRGQTALMQACQHGHWEVVLTLILYK-ANIHRADYLNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 75 ~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-a~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
.++|.+|..|+||||.|+..|..+.+.||+.+| +.+-..+. .|.+++.+|-+.|+.+++..|.+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~-ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDE-SSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccCccccccccc-ccchHHHHHHhcChHHHHHHHHHH
Confidence 456666666666666666666666666666666 45555553 666666666666666666666653
No 115
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.07 E-value=1.7e-05 Score=73.34 Aligned_cols=75 Identities=25% Similarity=0.432 Sum_probs=63.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
..|..|++.|+++.|++|++.|..+|..+.+. .+||.+|+..||.++|++|+++|+--+.-...|...+ |++.+.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD--~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~-YgaLnd 112 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFD--SSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCH-YGALND 112 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhccc--ccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhh-hhhhhH
Confidence 56999999999999999999998888777665 7999999999999999999999987776666777664 444443
No 116
>KOG4275 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.92 E-value=1.9e-06 Score=76.52 Aligned_cols=47 Identities=28% Similarity=0.695 Sum_probs=40.9
Q ss_pred CCCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
...|.||+|.+..-++.+|||. .|.+|.. .+..||+||+.|++.+++
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmVtCt~CGk----------------rm~eCPICRqyi~rvvri 347 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMVTCTKCGK----------------RMNECPICRQYIVRVVRI 347 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEEeehhhcc----------------ccccCchHHHHHHHHHhh
Confidence 5679999999999999999998 8888882 334699999999999875
No 117
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.90 E-value=5.1e-05 Score=79.06 Aligned_cols=129 Identities=22% Similarity=0.218 Sum_probs=86.8
Q ss_pred CCCccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhh
Q 014696 77 INLRNYRGQTALMQACQHGHWEVVLTLILY-KANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKK 155 (420)
Q Consensus 77 v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 155 (420)
+......|+|-||+++..+..-+++.+++- |......+. .|.-.+|+++ .++.+..-+++
T Consensus 567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~-d~qgV~hfca-~lg~ewA~ll~----------------- 627 (975)
T KOG0520|consen 567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDR-DGQGVIHFCA-ALGYEWAFLPI----------------- 627 (975)
T ss_pred cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcc-cCCChhhHhh-hcCCceeEEEE-----------------
Confidence 344455667777777777666666666664 444444443 5555666633 33333332222
Q ss_pred ccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcc-
Q 014696 156 SNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLT- 234 (420)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~- 234 (420)
.-+|..++ ..|..|+||||+|+..|+..++..|++.|++..
T Consensus 628 -----------------------------------~~~~~ai~---i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~ 669 (975)
T KOG0520|consen 628 -----------------------------------SADGVAID---IRDRNGWTPLHWAAFRGREKLVASLIELGADPGA 669 (975)
T ss_pred -----------------------------------eecccccc---cccCCCCcccchHhhcCHHHHHHHHHHhcccccc
Confidence 12344455 678899999999999999999999998877643
Q ss_pred -----ccccCCCCHHHHHHHcCchhHHHHhhhC
Q 014696 235 -----AENANGWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 235 -----~~d~~G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
..+-.|.|+-.+|..+|+..+.-+|.+.
T Consensus 670 ~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 670 VTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred ccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 3345699999999999999998888765
No 118
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=97.87 E-value=9.1e-06 Score=72.64 Aligned_cols=45 Identities=40% Similarity=0.965 Sum_probs=39.0
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.-.|.+|++....-.+.||||.||-.|.+..|+... .||+||...
T Consensus 239 ~~kC~LCLe~~~~pSaTpCGHiFCWsCI~~w~~ek~------------eCPlCR~~~ 283 (293)
T KOG0317|consen 239 TRKCSLCLENRSNPSATPCGHIFCWSCILEWCSEKA------------ECPLCREKF 283 (293)
T ss_pred CCceEEEecCCCCCCcCcCcchHHHHHHHHHHcccc------------CCCcccccC
Confidence 356999999998889999999999999999997772 299999653
No 119
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=97.80 E-value=1.6e-05 Score=51.49 Aligned_cols=41 Identities=37% Similarity=0.788 Sum_probs=31.7
Q ss_pred CCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 302 DPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 302 d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
|.|.||++.. -.++..+|||.+|..|...+-.... .||+||
T Consensus 1 d~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~~~~~~~------------~CP~CR 44 (44)
T PF13639_consen 1 DECPICLEEFEDGEKVVKLPCGHVFHRSCIKEWLKRNN------------SCPVCR 44 (44)
T ss_dssp -CETTTTCBHHTTSCEEEETTSEEEEHHHHHHHHHHSS------------B-TTTH
T ss_pred CCCcCCChhhcCCCeEEEccCCCeeCHHHHHHHHHhCC------------cCCccC
Confidence 5788998755 4667888999999999998875542 599998
No 120
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.80 E-value=3.8e-05 Score=79.97 Aligned_cols=91 Identities=22% Similarity=0.088 Sum_probs=75.5
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCcHHHHHHH-HHcCCCCCccccCCCChHHHHHH
Q 014696 49 GVRNSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGHWEVVLTL-ILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 49 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~~~iv~~L-l~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
-.|+|.||+++..+..-+++.+++- |......|.+|+-.+|+++. ++.+.+-+| .-.|..++.+|. .|+||||||+
T Consensus 572 ~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~-~G~tpL~wAa 649 (975)
T KOG0520|consen 572 FRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDR-NGWTPLHWAA 649 (975)
T ss_pred CcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccccccccC-CCCcccchHh
Confidence 3568999999999999999999985 77777888889999999554 444544444 457889999997 9999999999
Q ss_pred HcCCHHHHHHHHHhc
Q 014696 127 LNGHSRCIRLLLADY 141 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~ 141 (420)
..|+..++..|++-+
T Consensus 650 ~~G~e~l~a~l~~lg 664 (975)
T KOG0520|consen 650 FRGREKLVASLIELG 664 (975)
T ss_pred hcCHHHHHHHHHHhc
Confidence 999999999998654
No 121
>PHA02929 N1R/p28-like protein; Provisional
Probab=97.73 E-value=3e-05 Score=69.12 Aligned_cols=51 Identities=27% Similarity=0.683 Sum_probs=38.8
Q ss_pred CCCcccccCccce--------EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 301 PDPCVVCLERKCT--------VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 301 ~d~C~vC~~~~~~--------v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.+.|.||++.... .+..+|||.+|..|........ ..||+||..+.+++|-
T Consensus 174 ~~eC~ICle~~~~~~~~~~~~~vl~~C~H~FC~~CI~~Wl~~~------------~tCPlCR~~~~~v~~~ 232 (238)
T PHA02929 174 DKECAICMEKVYDKEIKNMYFGILSNCNHVFCIECIDIWKKEK------------NTCPVCRTPFISVIKS 232 (238)
T ss_pred CCCCccCCcccccCccccccceecCCCCCcccHHHHHHHHhcC------------CCCCCCCCEeeEEeee
Confidence 4789999986322 2455899999999998765332 3599999999988764
No 122
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.70 E-value=2e-05 Score=65.29 Aligned_cols=46 Identities=30% Similarity=0.730 Sum_probs=35.5
Q ss_pred CCcccccCccceE--EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 302 DPCVVCLERKCTV--AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 302 d~C~vC~~~~~~v--~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
--|.||++..... ++..|||.||.+|.+..-... ..||+||..|..
T Consensus 132 ~~CPiCl~~~sek~~vsTkCGHvFC~~Cik~alk~~------------~~CP~C~kkIt~ 179 (187)
T KOG0320|consen 132 YKCPICLDSVSEKVPVSTKCGHVFCSQCIKDALKNT------------NKCPTCRKKITH 179 (187)
T ss_pred cCCCceecchhhccccccccchhHHHHHHHHHHHhC------------CCCCCcccccch
Confidence 4589999865544 567999999999998876554 359999986653
No 123
>KOG1571 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=1.3e-05 Score=74.02 Aligned_cols=49 Identities=41% Similarity=0.869 Sum_probs=38.1
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
-++.|+||.+.+=..++.||||..| |. .|+.- .+.||+||+.|...+|.
T Consensus 304 ~p~lcVVcl~e~~~~~fvpcGh~cc--ct--~cs~~-----------l~~CPvCR~rI~~~~k~ 352 (355)
T KOG1571|consen 304 QPDLCVVCLDEPKSAVFVPCGHVCC--CT--LCSKH-----------LPQCPVCRQRIRLVRKR 352 (355)
T ss_pred CCCceEEecCCccceeeecCCcEEE--ch--HHHhh-----------CCCCchhHHHHHHHHHH
Confidence 3678999999999999999999844 33 44433 23499999999988764
No 124
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=97.56 E-value=8.9e-05 Score=63.26 Aligned_cols=60 Identities=18% Similarity=0.426 Sum_probs=41.5
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccc----cCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVA----KGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~----~~~~~~~~CP~CR~~I~~~ 360 (420)
.-.|.||++..-..+..+|||.+|..|........+..... ........||+||..|..-
T Consensus 18 ~~~CpICld~~~dPVvT~CGH~FC~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~ 81 (193)
T PLN03208 18 DFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEA 81 (193)
T ss_pred ccCCccCCCcCCCcEEcCCCchhHHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChh
Confidence 35699999988777888999999999998765432211100 0112345799999999763
No 125
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.52 E-value=0.00028 Score=67.70 Aligned_cols=70 Identities=23% Similarity=0.295 Sum_probs=59.2
Q ss_pred HhcCCHHHHHHHHHcCCCccccc---ccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHH
Q 014696 179 TLNGHVESVQLLLDLGASVSEYL---SVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVAR 248 (420)
Q Consensus 179 a~~g~~~~v~~Ll~~ga~~~~~~---~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 248 (420)
....-.+.+++|.+++.+.|... ..+..-.|+||+|+..|..++|.+||+.|+|+..+|..|+||++++.
T Consensus 399 kk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 399 KKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred hccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 44455788999999999887531 22334689999999999999999999999999999999999999987
No 126
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=97.51 E-value=0.00013 Score=46.45 Aligned_cols=42 Identities=31% Similarity=0.755 Sum_probs=28.8
Q ss_pred cccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 304 CVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 304 C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
|.||++-.-.-+..+|||.+|..|...+...... ....||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~FC~~Cl~~~~~~~~~--------~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSFCRSCLERLWKEPSG--------SGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEEEHHHHHHHHCCSSS--------ST---SSS
T ss_pred CCccchhhCCccccCCcCHHHHHHHHHHHHccCC--------cCCCCcCC
Confidence 6788887777789999999999999888755411 12679988
No 127
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=97.51 E-value=0.00012 Score=47.17 Aligned_cols=44 Identities=39% Similarity=0.816 Sum_probs=32.5
Q ss_pred CcccccCcc-ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 303 PCVVCLERK-CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 303 ~C~vC~~~~-~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.|.+|.+.. ..+...+|||.+|..|+..+... +...||.||..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~~c~~C~~~~~~~-----------~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHVFCRSCIDKWLKS-----------GKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCChhcHHHHHHHHHh-----------CcCCCCCCCCcC
Confidence 377888876 34455569999999999877644 235699999764
No 128
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=97.49 E-value=0.00012 Score=46.00 Aligned_cols=38 Identities=32% Similarity=0.874 Sum_probs=29.0
Q ss_pred cccccCccceE-EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 304 CVVCLERKCTV-AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 304 C~vC~~~~~~v-~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
|.+|++..... +..+|||.+|..|+..+-... ..||+|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~fC~~C~~~~~~~~------------~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSFCKECIEKYLEKN------------PKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEEEHHHHHHHHHCT------------SB-TTT
T ss_pred CCCCCCcccCcCEECCCCCchhHHHHHHHHHCc------------CCCcCC
Confidence 67888877766 789999999999998876553 359987
No 129
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=97.37 E-value=0.00019 Score=46.38 Aligned_cols=40 Identities=35% Similarity=0.870 Sum_probs=29.5
Q ss_pred cccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 304 CVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 304 C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
|.+|++.. -......|||.+|..|+..+- .....||+||+
T Consensus 2 C~~C~~~~~~~~~~~l~~CgH~~C~~C~~~~~------------~~~~~CP~C~k 44 (44)
T PF14634_consen 2 CNICFEKYSEERRPRLTSCGHIFCEKCLKKLK------------GKSVKCPICRK 44 (44)
T ss_pred CcCcCccccCCCCeEEcccCCHHHHHHHHhhc------------CCCCCCcCCCC
Confidence 56666555 345788999999999996664 23567999984
No 130
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=97.35 E-value=6.2e-05 Score=69.86 Aligned_cols=52 Identities=27% Similarity=0.627 Sum_probs=41.6
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
.+.|.||-+..-.|-..||||.+|..|+-..-... ....|||||.+|..+..
T Consensus 369 FeLCKICaendKdvkIEPCGHLlCt~CLa~WQ~sd----------~gq~CPFCRcEIKGte~ 420 (563)
T KOG1785|consen 369 FELCKICAENDKDVKIEPCGHLLCTSCLAAWQDSD----------EGQTCPFCRCEIKGTEP 420 (563)
T ss_pred HHHHHHhhccCCCcccccccchHHHHHHHhhcccC----------CCCCCCceeeEeccccc
Confidence 56799999999999999999999999985442111 23459999999988754
No 131
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=97.34 E-value=0.00021 Score=45.36 Aligned_cols=40 Identities=38% Similarity=0.886 Sum_probs=31.9
Q ss_pred cccccCccceEE-EeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 304 CVVCLERKCTVA-AKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 304 C~vC~~~~~~v~-~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
|.+|++...... ..+|||.+|..|....-... +...||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~fC~~C~~~~~~~~----------~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSFCRDCLRKWLENS----------GSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEEEHHHHHHHHHHT----------SSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcchHHHHHHHHHhc----------CCccCCcC
Confidence 678888776666 89999999999999887652 34569988
No 132
>PHA02926 zinc finger-like protein; Provisional
Probab=97.34 E-value=0.00019 Score=61.92 Aligned_cols=57 Identities=25% Similarity=0.488 Sum_probs=40.5
Q ss_pred CCCCcccccCccc---------eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 300 CPDPCVVCLERKC---------TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 300 ~~d~C~vC~~~~~---------~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
.++.|.+|++..- .-...+|+|.||..|....-.... .......||+||.....+++
T Consensus 169 kE~eCgICmE~I~eK~~~~eRrFGIL~~CnHsFCl~CIr~Wr~~r~------~~~~~rsCPiCR~~f~~I~p 234 (242)
T PHA02926 169 KEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRR------ETGASDNCPICRTRFRNITM 234 (242)
T ss_pred CCCCCccCccccccccccccccccccCCCCchHHHHHHHHHHHhcc------ccCcCCcCCCCcceeeeecc
Confidence 3578999998521 125568999999999998876431 12245679999988775544
No 133
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.33 E-value=0.0001 Score=65.19 Aligned_cols=45 Identities=33% Similarity=0.755 Sum_probs=37.1
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHH-HhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALY-LCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~-lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
-.|.+|++.+-.....+|||.||-.|.+. .+... .-.||+||+.+
T Consensus 216 ~kC~lC~e~~~~ps~t~CgHlFC~~Cl~~~~t~~k-----------~~~CplCRak~ 261 (271)
T COG5574 216 YKCFLCLEEPEVPSCTPCGHLFCLSCLLISWTKKK-----------YEFCPLCRAKV 261 (271)
T ss_pred cceeeeecccCCcccccccchhhHHHHHHHHHhhc-----------cccCchhhhhc
Confidence 45999999999999999999999999988 44332 34599999865
No 134
>KOG0823 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.00017 Score=62.77 Aligned_cols=49 Identities=27% Similarity=0.574 Sum_probs=41.0
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.|.||+|..-.-+...|||.+|=-|...+-.+. +.+..||+|+..|..=
T Consensus 49 dCNICLd~akdPVvTlCGHLFCWpClyqWl~~~---------~~~~~cPVCK~~Vs~~ 97 (230)
T KOG0823|consen 49 DCNICLDLAKDPVVTLCGHLFCWPCLYQWLQTR---------PNSKECPVCKAEVSID 97 (230)
T ss_pred eeeeeccccCCCEEeecccceehHHHHHHHhhc---------CCCeeCCccccccccc
Confidence 499999999998999999999999997776554 3456699999988654
No 135
>KOG2164 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.18 E-value=0.00023 Score=68.85 Aligned_cols=52 Identities=31% Similarity=0.718 Sum_probs=42.8
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
...|.||++.+..-.-..|||.+|-.|.+.+....+ . -+-..||+||..|.-
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiFC~~CiLqy~~~s~----~---~~~~~CPiC~s~I~~ 237 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIFCGPCILQYWNYSA----I---KGPCSCPICRSTITL 237 (513)
T ss_pred CCcCCcccCCCCcccccccCceeeHHHHHHHHhhhc----c---cCCccCCchhhhccc
Confidence 568999999888778888999999999999987761 1 234579999998865
No 136
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.99 E-value=0.0013 Score=37.09 Aligned_cols=28 Identities=39% Similarity=0.650 Sum_probs=24.3
Q ss_pred CccHHHHHHHcCCHHHHHHHHHhCCCcc
Q 014696 207 GSTSLHYAACGGNAQCCQILIAMGASLT 234 (420)
Q Consensus 207 g~TpLh~Aa~~g~~~iv~~Ll~~gad~~ 234 (420)
|.||+|+|+..++.+++++|+++|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6789999999999999999999887664
No 137
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=96.94 E-value=0.0012 Score=47.84 Aligned_cols=43 Identities=35% Similarity=0.815 Sum_probs=32.1
Q ss_pred CCCCcccccCcc-------------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 300 CPDPCVVCLERK-------------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 300 ~~d~C~vC~~~~-------------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
..|.|.||++.. +.+...+|||.+...|....-.... .||+||
T Consensus 18 ~~d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~FH~~Ci~~Wl~~~~------------~CP~CR 73 (73)
T PF12678_consen 18 ADDNCAICREPLEDPCPECQAPQDECPIVWGPCGHIFHFHCISQWLKQNN------------TCPLCR 73 (73)
T ss_dssp CCSBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEEEHHHHHHHHTTSS------------B-TTSS
T ss_pred cCCcccccChhhhChhhhhcCCccccceEecccCCCEEHHHHHHHHhcCC------------cCCCCC
Confidence 356688888654 7788889999999999987765542 599998
No 138
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.94 E-value=0.0017 Score=36.61 Aligned_cols=26 Identities=46% Similarity=0.880 Sum_probs=15.4
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCC
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDI 77 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v 77 (420)
.||||+|+..|+.++++.|++.|.++
T Consensus 3 ~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 3 RTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45666666666666666666655544
No 139
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=96.89 E-value=0.0011 Score=41.02 Aligned_cols=39 Identities=33% Similarity=0.844 Sum_probs=30.4
Q ss_pred cccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 304 CVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 304 C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
|.+|++........+|||.+|..|...+.. .+...||+|
T Consensus 1 C~iC~~~~~~~~~~~C~H~~c~~C~~~~~~-----------~~~~~CP~C 39 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTFCRSCIRKWLK-----------SGNNTCPIC 39 (39)
T ss_pred CCcCccCCCCcEEecCCChHHHHHHHHHHH-----------hCcCCCCCC
Confidence 568888777778889999999999987754 123459987
No 140
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.87 E-value=0.0021 Score=61.96 Aligned_cols=64 Identities=22% Similarity=0.195 Sum_probs=37.3
Q ss_pred CcHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 62 GHHEIVSLLIESGVDINL------RNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 62 g~~~iv~~Ll~~g~~v~~------~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
.-...+++|.+++.+.|. .+...-|+||+|+.+|..++|.+||+.|+|+...|. .|+||..++.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~-~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDG-AGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhccc-CCCCcccccc
Confidence 335556666666554432 223344666666666666666666666666666665 6666666555
No 141
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=96.84 E-value=0.019 Score=48.60 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=35.1
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhh
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILST 261 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~ 261 (420)
-|..|+..|-...|...+++|.+++. ++|..|+++++..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 46778888888888888888777653 67888888888888777654
No 142
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.77 E-value=0.00077 Score=64.78 Aligned_cols=47 Identities=28% Similarity=0.574 Sum_probs=37.3
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.-.|.||.+....-+..+|||.||..|........ ..||.||..+..
T Consensus 26 ~l~C~IC~d~~~~PvitpCgH~FCs~CI~~~l~~~------------~~CP~Cr~~~~~ 72 (397)
T TIGR00599 26 SLRCHICKDFFDVPVLTSCSHTFCSLCIRRCLSNQ------------PKCPLCRAEDQE 72 (397)
T ss_pred ccCCCcCchhhhCccCCCCCCchhHHHHHHHHhCC------------CCCCCCCCcccc
Confidence 34799999977666778999999999998765332 259999998764
No 143
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.67 E-value=0.014 Score=50.75 Aligned_cols=122 Identities=18% Similarity=0.211 Sum_probs=78.8
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcc
Q 014696 87 ALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFD 166 (420)
Q Consensus 87 pL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (420)
.|--|+..-+.+-+.-++. +...-.++|.+|+.++..+++-+|+.+..-...+ ....
T Consensus 156 sledAV~AsN~~~i~~~Vt--------dKkdA~~Am~~si~~~K~dva~~lls~f~ft~~d--------------v~~~- 212 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVT--------DKKDAHQAMWLSIGNAKEDVALYLLSKFNFTKQD--------------VASM- 212 (284)
T ss_pred cHHHHHhhcCHHHHHHHhc--------chHHHHHHHHHHhcccHHHHHHHHHhhcceecch--------------hhhc-
Confidence 4556666666665555542 2224678899999999999999999753211100 0000
Q ss_pred cccchhhHHHHH--HhcCCHHHHHHHHHcCC-CcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 167 ERYFHLEVLLHL--TLNGHVESVQLLLDLGA-SVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 167 ~~~~~~~~~l~a--a~~g~~~~v~~Ll~~ga-~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
..+..-+-++ .-..+..++++.+++|. ++|.....-+.|.|.|.-|.+.++.+++.+||++||-.
T Consensus 213 --~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 213 --EKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred --CcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 0011122222 34456778888888874 77776677778889999999999999999999988843
No 144
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.46 E-value=0.0031 Score=58.10 Aligned_cols=47 Identities=23% Similarity=0.550 Sum_probs=33.1
Q ss_pred CCCcccccCc----cce--EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLER----KCT--VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~----~~~--v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
...|.+|... +.. ++. +|||.+|..|...+.... ..+||.|+..+..
T Consensus 3 ~~~CP~Ck~~~y~np~~kl~i~-~CGH~~C~sCv~~l~~~~-----------~~~CP~C~~~lrk 55 (309)
T TIGR00570 3 DQGCPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRG-----------SGSCPECDTPLRK 55 (309)
T ss_pred CCCCCcCCCCCccCcccccccC-CCCCcccHHHHHHHhcCC-----------CCCCCCCCCccch
Confidence 3579999873 221 233 799999999998876332 2369999966654
No 145
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=96.28 E-value=0.0033 Score=40.09 Aligned_cols=31 Identities=32% Similarity=0.710 Sum_probs=18.4
Q ss_pred cccccCccce----EEEeCCCcccchhhHHHHhhcC
Q 014696 304 CVVCLERKCT----VAAKGCDHEFCTQCALYLCSTN 335 (420)
Q Consensus 304 C~vC~~~~~~----v~~~~cgH~~C~~C~~~lc~~~ 335 (420)
|.||.+ ..+ -...+|||.+|..|...+.+..
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~c~~cl~~l~~~~ 35 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVFCKDCLQKLSKKS 35 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EEEHHHHHHHHHH-
T ss_pred CCcccc-ccCCCCCCEEEeCccHHHHHHHHHHHhcC
Confidence 567777 433 3446799999999999998754
No 146
>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.23 E-value=0.0028 Score=55.76 Aligned_cols=44 Identities=34% Similarity=0.634 Sum_probs=34.1
Q ss_pred CcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 303 PCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
.|..|.++..+|...||.|. +|..|. .+...||+|+..+.+.+.
T Consensus 160 ~Cr~C~~~~~~VlllPCrHl~lC~~C~----------------~~~~~CPiC~~~~~s~~~ 204 (207)
T KOG1100|consen 160 SCRKCGEREATVLLLPCRHLCLCGICD----------------ESLRICPICRSPKTSSVE 204 (207)
T ss_pred cceecCcCCceEEeecccceEeccccc----------------ccCccCCCCcChhhceee
Confidence 39999999999999999996 555555 113349999988877653
No 147
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=95.73 E-value=0.022 Score=52.97 Aligned_cols=54 Identities=17% Similarity=0.483 Sum_probs=39.0
Q ss_pred CCCCCCcccccCccceE-------------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 298 STCPDPCVVCLERKCTV-------------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v-------------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
..+...|.+|+|..-.- --.||||.+--.|++..|... ..||+||.+++-=.|-
T Consensus 284 ~n~D~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHilHl~CLknW~ERq------------QTCPICr~p~ifd~~~ 350 (491)
T COG5243 284 TNSDRTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHILHLHCLKNWLERQ------------QTCPICRRPVIFDQSS 350 (491)
T ss_pred cCCCCeEEEecccccCCCCccCcccccCCcccccccceeeHHHHHHHHHhc------------cCCCcccCccccccCC
Confidence 44457799999862111 345799999999999998665 3599999996544443
No 148
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=95.70 E-value=0.014 Score=40.80 Aligned_cols=44 Identities=9% Similarity=0.051 Sum_probs=33.8
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
.|.+|.+-.-.-+..+|||.+|.+|........ ..||+|+..+.
T Consensus 3 ~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~~------------~~cP~~~~~~~ 46 (63)
T smart00504 3 LCPISLEVMKDPVILPSGQTYERRAIEKWLLSH------------GTDPVTGQPLT 46 (63)
T ss_pred CCcCCCCcCCCCEECCCCCEEeHHHHHHHHHHC------------CCCCCCcCCCC
Confidence 477887765555777999999999998876442 25999998873
No 149
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=95.66 E-value=0.0058 Score=40.57 Aligned_cols=45 Identities=24% Similarity=0.469 Sum_probs=32.9
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
+.+|+.|....-.-...+|||..|..|.-.- .-..||+|-.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~pCgH~I~~~~f~~~--------------rYngCPfC~~~~~~ 51 (55)
T PF14447_consen 7 EQPCVFCGFVGTKGTVLPCGHLICDNCFPGE--------------RYNGCPFCGTPFEF 51 (55)
T ss_pred ceeEEEccccccccccccccceeeccccChh--------------hccCCCCCCCcccC
Confidence 4568888877666678899999999998211 12349999987753
No 150
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=95.65 E-value=0.0072 Score=54.15 Aligned_cols=56 Identities=27% Similarity=0.524 Sum_probs=40.9
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPI 369 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~ 369 (420)
...|.||-++...-+..+|||.||.-|-+..-.+- ..||+||.+- .+..+|+.+-+
T Consensus 25 ~lrC~IC~~~i~ip~~TtCgHtFCslCIR~hL~~q------------p~CP~Cr~~~-~esrlr~~s~~ 80 (391)
T COG5432 25 MLRCRICDCRISIPCETTCGHTFCSLCIRRHLGTQ------------PFCPVCREDP-CESRLRGSSGS 80 (391)
T ss_pred HHHhhhhhheeecceecccccchhHHHHHHHhcCC------------CCCccccccH-HhhhcccchhH
Confidence 45699999988877889999999999997765433 3499999764 33455554433
No 151
>KOG0824 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.43 E-value=0.007 Score=54.77 Aligned_cols=50 Identities=24% Similarity=0.444 Sum_probs=36.5
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
.++|.+|....-.-+-.+|+|.+|--|..--- . -.+..|++||.+|.+-.
T Consensus 7 ~~eC~IC~nt~n~Pv~l~C~HkFCyiCiKGsy-------~----ndk~~CavCR~pids~i 56 (324)
T KOG0824|consen 7 KKECLICYNTGNCPVNLYCFHKFCYICIKGSY-------K----NDKKTCAVCRFPIDSTI 56 (324)
T ss_pred CCcceeeeccCCcCccccccchhhhhhhcchh-------h----cCCCCCceecCCCCcch
Confidence 46899999766555888999999988873221 1 12345999999999853
No 152
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.38 E-value=0.25 Score=41.92 Aligned_cols=140 Identities=17% Similarity=0.129 Sum_probs=94.1
Q ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHH
Q 014696 53 SPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSR 132 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~ 132 (420)
-.|.-|+.++.+.|++..-+...+- -...++-+..||+..+.|+|+|+-+ +.... +-.+.+..|....+.+
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~q---nL~i~---~~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQ---NLHIY---NPEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhh---ccCCC---Cchhhhhhhhhccchh
Confidence 4667788899999998887653211 2346788889999999999999933 32222 3456678888888877
Q ss_pred HHHH----HHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 133 CIRL----LLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 133 iv~~----Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
...+ ++++..+. ...+....-..-+-.|+..|-...+...+++|-+++ .
T Consensus 119 LyslGY~l~~~~~~~~------------------~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~---------~ 171 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSE------------------HNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD---------I 171 (192)
T ss_pred HHHHHHHHHHhhcccc------------------cccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc---------H
Confidence 5321 11110000 011111111223445589999999999999998887 3
Q ss_pred cHHHHHHHcCCHHHHHHHHH
Q 014696 209 TSLHYAACGGNAQCCQILIA 228 (420)
Q Consensus 209 TpLh~Aa~~g~~~iv~~Ll~ 228 (420)
++|..|+..++..++.+++.
T Consensus 172 ~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 172 IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHHhhHHHHHHHhhc
Confidence 89999999999999998874
No 153
>KOG0287 consensus Postreplication repair protein RAD18 [Replication, recombination and repair]
Probab=95.17 E-value=0.0085 Score=54.91 Aligned_cols=45 Identities=27% Similarity=0.623 Sum_probs=36.9
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.|.||.+-.-.-...||||.+|.-|-+..-+.. ..||.|+-.+.+
T Consensus 25 RC~IC~eyf~ip~itpCsHtfCSlCIR~~L~~~------------p~CP~C~~~~~E 69 (442)
T KOG0287|consen 25 RCGICFEYFNIPMITPCSHTFCSLCIRKFLSYK------------PQCPTCCVTVTE 69 (442)
T ss_pred HHhHHHHHhcCceeccccchHHHHHHHHHhccC------------CCCCceecccch
Confidence 589999988777888999999999998876554 239999977654
No 154
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.16 E-value=0.0088 Score=54.04 Aligned_cols=44 Identities=30% Similarity=0.622 Sum_probs=31.3
Q ss_pred CcccccCccc---eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 303 PCVVCLERKC---TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 303 ~C~vC~~~~~---~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.|++|++..- -+.+.||.|++-+.|.-..-- .-+..||+||.+|
T Consensus 325 eCaICms~fiK~d~~~vlPC~H~FH~~Cv~kW~~-----------~y~~~CPvCrt~i 371 (374)
T COG5540 325 ECAICMSNFIKNDRLRVLPCDHRFHVGCVDKWLL-----------GYSNKCPVCRTAI 371 (374)
T ss_pred eEEEEhhhhcccceEEEeccCceechhHHHHHHh-----------hhcccCCccCCCC
Confidence 6999996442 247889999988888744332 1234599999876
No 155
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.06 E-value=0.015 Score=54.58 Aligned_cols=50 Identities=26% Similarity=0.557 Sum_probs=33.8
Q ss_pred CCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 302 DPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 302 d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
+.|+||+|.- -.+...||+|.+-..|--..- ...+..||+|++.|-.-.+
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~FH~~CIDpWL-----------~~~r~~CPvCK~di~~~~~ 282 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKFHVNCIDPWL-----------TQTRTFCPVCKRDIRTDSG 282 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCchhhccchhhH-----------hhcCccCCCCCCcCCCCCC
Confidence 5899999743 345779999997666653222 2224459999996655443
No 156
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=95.05 E-value=0.018 Score=52.91 Aligned_cols=51 Identities=27% Similarity=0.568 Sum_probs=41.2
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
...|.||-+..--+...||+|.+|-.|++.+=..-+. .-||+||.+-..++
T Consensus 61 n~~C~ICA~~~TYs~~~PC~H~~CH~Ca~RlRALY~~----------K~C~~CrTE~e~V~ 111 (493)
T COG5236 61 NMNCQICAGSTTYSARYPCGHQICHACAVRLRALYMQ----------KGCPLCRTETEAVV 111 (493)
T ss_pred cceeEEecCCceEEEeccCCchHHHHHHHHHHHHHhc----------cCCCccccccceEE
Confidence 4569999999888899999999999999887655522 23999998876664
No 157
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]
Probab=94.56 E-value=0.01 Score=60.56 Aligned_cols=43 Identities=30% Similarity=0.685 Sum_probs=36.9
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
.|.+|.+++=.++...|||.||-.|......+. .+.||-|-..
T Consensus 645 kCs~Cn~R~Kd~vI~kC~H~FC~~Cvq~r~etR-----------qRKCP~Cn~a 687 (698)
T KOG0978|consen 645 KCSVCNTRWKDAVITKCGHVFCEECVQTRYETR-----------QRKCPKCNAA 687 (698)
T ss_pred eCCCccCchhhHHHHhcchHHHHHHHHHHHHHh-----------cCCCCCCCCC
Confidence 399999999999999999999999998776555 5679999754
No 158
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.26 E-value=0.23 Score=43.51 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=83.4
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc----CCCCCCccCCCCCHHHHHHHc
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES----GVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~----g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.|-.|+...|++.+..++....+ -.++|-+|+.++..+++-+|+.+ .-|+-.. ..+.--+.|+...
T Consensus 156 sledAV~AsN~~~i~~~VtdKkd---------A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~-~~~~ydieY~LS~ 225 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDKKD---------AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM-EKELYDIEYLLSE 225 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcchHH---------HHHHHHHHhcccHHHHHHHHHhhcceecchhhhc-CcchhhHHHHHhh
Confidence 47789999999999888865422 14799999999999999999975 1122111 1133345565543
Q ss_pred --CcHHHHHHHHHcCC-CCCcc--ccCCCChHHHHHHHcCCHHHHHHHHHhcCCC
Q 014696 95 --GHWEVVLTLILYKA-NIHRA--DYLNGGTALHLAALNGHSRCIRLLLADYIPS 144 (420)
Q Consensus 95 --g~~~iv~~Ll~~ga-~~~~~--~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~ 144 (420)
.+..++++.+..|- ++|.. .-..|.|-|.-|+..++.+++.+|+++|+..
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 35778999999873 55532 2237999999999999999999999988743
No 159
>KOG2177 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=94.07 E-value=0.022 Score=54.04 Aligned_cols=44 Identities=32% Similarity=0.739 Sum_probs=35.7
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
++-.|.||++..-.-...+|||.+|..|...+.. ....||.||.
T Consensus 12 ~~~~C~iC~~~~~~p~~l~C~H~~c~~C~~~~~~------------~~~~Cp~cr~ 55 (386)
T KOG2177|consen 12 EELTCPICLEYFREPVLLPCGHNFCRACLTRSWE------------GPLSCPVCRP 55 (386)
T ss_pred ccccChhhHHHhhcCccccccchHhHHHHHHhcC------------CCcCCcccCC
Confidence 3457999998776668889999999999977765 3367999995
No 160
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=93.74 E-value=0.089 Score=38.71 Aligned_cols=39 Identities=33% Similarity=0.708 Sum_probs=28.1
Q ss_pred ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 310 RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 310 ~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..|.++.-.|+|.|-..|.+..-++.. ....||+||+..
T Consensus 43 d~Cplv~g~C~H~FH~hCI~kWl~~~~---------~~~~CPmCR~~w 81 (85)
T PF12861_consen 43 DDCPLVWGKCSHNFHMHCILKWLSTQS---------SKGQCPMCRQPW 81 (85)
T ss_pred CCCceeeccCccHHHHHHHHHHHcccc---------CCCCCCCcCCee
Confidence 345666667999999999988776541 123699999764
No 161
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.96 E-value=0.15 Score=45.73 Aligned_cols=59 Identities=24% Similarity=0.487 Sum_probs=41.9
Q ss_pred CCCCcccccCccceE-EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCC
Q 014696 300 CPDPCVVCLERKCTV-AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRP 368 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v-~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~ 368 (420)
..-.|.+|.+.+..- ...+|||..|=-|...-+... -+-.||.|-..+..+.+-+..+|
T Consensus 238 ~~~~C~~Cg~~PtiP~~~~~C~HiyCY~Ci~ts~~~~----------asf~Cp~Cg~~~~~lq~sgv~~~ 297 (298)
T KOG2879|consen 238 SDTECPVCGEPPTIPHVIGKCGHIYCYYCIATSRLWD----------ASFTCPLCGENVEPLQASGVKSP 297 (298)
T ss_pred CCceeeccCCCCCCCeeeccccceeehhhhhhhhcch----------hhcccCccCCCCcchhhccCCCC
Confidence 345799999988665 444599999999986655433 12249999999988875555443
No 162
>KOG0802 consensus E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.48 E-value=0.062 Score=55.02 Aligned_cols=44 Identities=27% Similarity=0.673 Sum_probs=36.9
Q ss_pred CCCCcccccCccce-----EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 300 CPDPCVVCLERKCT-----VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 300 ~~d~C~vC~~~~~~-----v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
..+.|.||.|..-. .--.+|||.++..|.+......+ .||+||.
T Consensus 290 ~~~~C~IC~e~l~~~~~~~~~rL~C~Hifh~~CL~~W~er~q------------tCP~CR~ 338 (543)
T KOG0802|consen 290 SDELCIICLEELHSGHNITPKRLPCGHIFHDSCLRSWFERQQ------------TCPTCRT 338 (543)
T ss_pred cCCeeeeechhhccccccccceeecccchHHHHHHHHHHHhC------------cCCcchh
Confidence 35789999997766 57779999999999999987653 3999998
No 163
>KOG4739 consensus Uncharacterized protein involved in synaptonemal complex formation [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=92.44 E-value=0.086 Score=46.65 Aligned_cols=47 Identities=26% Similarity=0.613 Sum_probs=30.5
Q ss_pred cccccCcc--ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 304 CVVCLERK--CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 304 C~vC~~~~--~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
|-.|...+ -.++...|+|++|..|...- ....||+||.. ++.+++=.
T Consensus 6 Cn~C~~~~~~~~f~LTaC~HvfC~~C~k~~--------------~~~~C~lCkk~-ir~i~l~~ 54 (233)
T KOG4739|consen 6 CNKCFRFPSQDPFFLTACRHVFCEPCLKAS--------------SPDVCPLCKKS-IRIIQLNR 54 (233)
T ss_pred eccccccCCCCceeeeechhhhhhhhcccC--------------Cccccccccce-eeeeeccc
Confidence 55555433 34577889999999998221 11169999987 55555433
No 164
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=92.44 E-value=0.045 Score=37.70 Aligned_cols=40 Identities=28% Similarity=0.784 Sum_probs=17.2
Q ss_pred CcccccCccceEE-EeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 303 PCVVCLERKCTVA-AKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 303 ~C~vC~~~~~~v~-~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
.|.+|.+-.-..+ ...|.|.+|..|....- ...||+|+.+
T Consensus 9 rCs~C~~~l~~pv~l~~CeH~fCs~Ci~~~~--------------~~~CPvC~~P 49 (65)
T PF14835_consen 9 RCSICFDILKEPVCLGGCEHIFCSSCIRDCI--------------GSECPVCHTP 49 (65)
T ss_dssp S-SSS-S--SS-B---SSS--B-TTTGGGGT--------------TTB-SSS--B
T ss_pred CCcHHHHHhcCCceeccCccHHHHHHhHHhc--------------CCCCCCcCCh
Confidence 4677776544443 46899999999983311 1239999943
No 165
>KOG4159 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.29 E-value=0.077 Score=51.30 Aligned_cols=47 Identities=30% Similarity=0.696 Sum_probs=35.7
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
-.|.||++..-.-+..||||-+|..|... |.. ....||.||.++.++
T Consensus 85 f~c~vc~~~l~~pv~tpcghs~c~~Cl~r-~ld-----------~~~~cp~Cr~~l~e~ 131 (398)
T KOG4159|consen 85 FECCVCSRALYPPVVTPCGHSFCLECLDR-SLD-----------QETECPLCRDELVEL 131 (398)
T ss_pred hhhhhhHhhcCCCccccccccccHHHHHH-Hhc-----------cCCCCcccccccccc
Confidence 45899987666667779999999999765 222 234599999999974
No 166
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=92.26 E-value=0.079 Score=49.02 Aligned_cols=49 Identities=16% Similarity=0.461 Sum_probs=39.4
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+.+.|.||...+.+-++.||||..|..|-..---.+ ..|-+|+..|..
T Consensus 420 sEd~lCpICyA~pi~Avf~PC~H~SC~~CI~qHlmN~------------k~CFfCktTv~~ 468 (489)
T KOG4692|consen 420 SEDNLCPICYAGPINAVFAPCSHRSCYGCITQHLMNC------------KRCFFCKTTVID 468 (489)
T ss_pred cccccCcceecccchhhccCCCCchHHHHHHHHHhcC------------CeeeEecceeee
Confidence 3457799999999999999999999999986654333 459999977664
No 167
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.05 E-value=0.25 Score=35.97 Aligned_cols=45 Identities=22% Similarity=0.304 Sum_probs=19.7
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHH
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLIL 105 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 105 (420)
.|..|+..|+.||++.+++.+ .++ ...|..|+...+-++++||++
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~ 53 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIE 53 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHH
Confidence 344444444444444444332 111 223444444444444444444
No 168
>KOG0827 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=91.07 E-value=0.14 Score=48.08 Aligned_cols=44 Identities=25% Similarity=0.683 Sum_probs=33.8
Q ss_pred CCcccccCccceE---EEeC-CCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 302 DPCVVCLERKCTV---AAKG-CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 302 d~C~vC~~~~~~v---~~~~-cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
..|.||.|....+ .+++ |||.+-..|+......+ |-.+.||.||
T Consensus 5 A~C~Ic~d~~p~~~~l~~i~~cGhifh~~cl~qwfe~~---------Ps~R~cpic~ 52 (465)
T KOG0827|consen 5 AECHICIDGRPNDHELGPIGTCGHIFHTTCLTQWFEGD---------PSNRGCPICQ 52 (465)
T ss_pred ceeeEeccCCccccccccccchhhHHHHHHHHHHHccC---------CccCCCCcee
Confidence 4799998766655 5666 99999999988887666 2236699999
No 169
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.81 E-value=0.52 Score=34.25 Aligned_cols=49 Identities=27% Similarity=0.301 Sum_probs=41.5
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES 73 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~ 73 (420)
+.+.+..|+..|+.|+++.+++.+. .. ...|..|+..-+.++++||++.
T Consensus 6 t~~tl~~Ai~GGN~eII~~c~~~~~-~~--------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 6 TKKTLEYAIIGGNFEIINICLKKNK-PD--------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred CHHHHHHHHhCCCHHHHHHHHHHhc-cH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3467999999999999999997662 11 3589999999999999999996
No 170
>KOG1814 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=90.42 E-value=0.14 Score=48.65 Aligned_cols=50 Identities=24% Similarity=0.684 Sum_probs=38.1
Q ss_pred CcccccCccc---eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 303 PCVVCLERKC---TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 303 ~C~vC~~~~~---~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
.|.||++..- -+...||+|.+|..|++.+.... +.++......||-+.-+
T Consensus 186 ~C~ICf~e~~G~~c~~~lpC~Hv~Ck~C~kdY~~~~----i~eg~v~~l~Cp~~~C~ 238 (445)
T KOG1814|consen 186 DCCICFEEQMGQHCFKFLPCSHVFCKSCLKDYFTIQ----IQEGQVSCLKCPDPKCG 238 (445)
T ss_pred cceeeehhhcCcceeeecccchHHHHHHHHHHHHHh----hhcceeeeecCCCCCCc
Confidence 5899997443 34778999999999999998776 45555666779887644
No 171
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.91 E-value=0.12 Score=40.96 Aligned_cols=58 Identities=28% Similarity=0.560 Sum_probs=44.1
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
...|-||.. +-+|-+||| .|.-|....|..|.-....+..--+..|-+||....-+.|
T Consensus 65 datC~IC~K---TKFADG~GH-~C~YCq~r~CARCGGrv~lrsNKv~wvcnlc~k~q~il~k 122 (169)
T KOG3799|consen 65 DATCGICHK---TKFADGCGH-NCSYCQTRFCARCGGRVSLRSNKVMWVCNLCRKQQEILTK 122 (169)
T ss_pred Ccchhhhhh---cccccccCc-ccchhhhhHHHhcCCeeeeccCceEEeccCCcHHHHHHHh
Confidence 356999987 458889999 6888999999988655555544556779999987776655
No 172
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=88.11 E-value=0.86 Score=37.64 Aligned_cols=30 Identities=23% Similarity=0.585 Sum_probs=20.7
Q ss_pred CCCCCCCCccccccccccCCCCCc-cccccc
Q 014696 346 GSIPCPLCRHGIVSFDKLPGTRPI-KEITRT 375 (420)
Q Consensus 346 ~~~~CP~CR~~I~~~~~~~~~~~~-~~~~~~ 375 (420)
....||+||++|..|+..-..+-- -...|.
T Consensus 79 ~~L~CPLCRG~V~GWtvve~AR~~LN~K~Rs 109 (162)
T PF07800_consen 79 PELACPLCRGEVKGWTVVEPARRFLNAKKRS 109 (162)
T ss_pred ccccCccccCceeceEEchHHHHHhccCCcc
Confidence 356799999999999887332222 356664
No 173
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=87.93 E-value=0.15 Score=55.52 Aligned_cols=72 Identities=25% Similarity=0.493 Sum_probs=46.2
Q ss_pred CCCCCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCcccc
Q 014696 299 TCPDPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPIKEI 372 (420)
Q Consensus 299 ~~~d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~~~~ 372 (420)
+..|.|+||+... +.-.-.+|||.+-.+|.+..-...-. -.+-.-+-+.||+|.++|...+-----.|+|++
T Consensus 3484 D~DDmCmICFTE~L~AAP~IqL~C~HiFHlqC~R~vLE~RW~--GPRItF~FisCPiC~n~InH~~LkDLldPiKel 3558 (3738)
T KOG1428|consen 3484 DADDMCMICFTEALSAAPAIQLDCSHIFHLQCCRRVLENRWL--GPRITFGFISCPICKNKINHIVLKDLLDPIKEL 3558 (3738)
T ss_pred ccCceEEEEehhhhCCCcceecCCccchhHHHHHHHHHhccc--CCeeEEeeeecccccchhhhHHHHHHHHHHHHH
Confidence 3357899998644 23355689999999998887665511 111223457799999999887532112566544
No 174
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=87.88 E-value=0.24 Score=45.12 Aligned_cols=46 Identities=26% Similarity=0.603 Sum_probs=32.0
Q ss_pred CcccccCccceE--EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 303 PCVVCLERKCTV--AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 303 ~C~vC~~~~~~v--~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.|..|.- +..| -.+||.|.||-+|++.-- .+-||.|...|.++..+
T Consensus 92 fCd~Cd~-PI~IYGRmIPCkHvFCl~CAr~~~--------------dK~Cp~C~d~VqrIeq~ 139 (389)
T KOG2932|consen 92 FCDRCDF-PIAIYGRMIPCKHVFCLECARSDS--------------DKICPLCDDRVQRIEQI 139 (389)
T ss_pred eecccCC-cceeeecccccchhhhhhhhhcCc--------------cccCcCcccHHHHHHHh
Confidence 3556633 3333 567899999999994321 33599999998888655
No 175
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=87.60 E-value=0.33 Score=50.88 Aligned_cols=51 Identities=25% Similarity=0.643 Sum_probs=36.6
Q ss_pred CCCCCCcccccC------cc-ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 298 STCPDPCVVCLE------RK-CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 298 ~~~~d~C~vC~~------~~-~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
-...++|.+|.. +. ..--+.-|.|.+-++|........ ++..||+||.+|.
T Consensus 1466 fsG~eECaICYsvL~~vdr~lPskrC~TCknKFH~~CLyKWf~Ss----------~~s~CPlCRseit 1523 (1525)
T COG5219 1466 FSGHEECAICYSVLDMVDRSLPSKRCATCKNKFHTRCLYKWFASS----------ARSNCPLCRSEIT 1523 (1525)
T ss_pred cCCcchhhHHHHHHHHHhccCCccccchhhhhhhHHHHHHHHHhc----------CCCCCCccccccc
Confidence 345688999973 21 222444699999999998887665 4556999998875
No 176
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=87.42 E-value=0.34 Score=44.69 Aligned_cols=61 Identities=21% Similarity=0.415 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCcccccCccce----EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc----cccccc
Q 014696 292 RNSDSLSTCPDPCVVCLERKCT----VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI----VSFDKL 363 (420)
Q Consensus 292 ~~~~~~~~~~d~C~vC~~~~~~----v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I----~~~~~~ 363 (420)
+++....+++|-|..|.+..-. +..-+||-+.|.-|+-.+-.. ..-+||.||+.- ++|+.+
T Consensus 5 qei~~sedeed~cplcie~mditdknf~pc~cgy~ic~fc~~~irq~-----------lngrcpacrr~y~denv~~~~~ 73 (480)
T COG5175 5 QEIHNSEDEEDYCPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQN-----------LNGRCPACRRKYDDENVRYVTL 73 (480)
T ss_pred hhccccccccccCcccccccccccCCcccCCcccHHHHHHHHHHHhh-----------ccCCChHhhhhccccceeEEec
Confidence 3445566677889999985422 244569999999998443221 344699999854 455554
No 177
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=87.31 E-value=0.45 Score=45.14 Aligned_cols=57 Identities=25% Similarity=0.523 Sum_probs=39.1
Q ss_pred CCCCCcccccCccceEE-----E---eCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 299 TCPDPCVVCLERKCTVA-----A---KGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~-----~---~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.....|.||++..-... + .+|-|-+|.+|.+..=..... .......||+||..+..+
T Consensus 159 s~~k~CGICme~i~ek~~~~~rfgilpnC~H~~Cl~Cir~wr~~~q~-----~~~~sksCP~CRv~s~~v 223 (344)
T KOG1039|consen 159 SSEKECGICMETINEKAASERRFGILPNCNHSFCLNCIRKWRQATQF-----ESKTSKSCPFCRVPSSFV 223 (344)
T ss_pred cccccceehhhhccccchhhhhcccCCCcchhhhhcHhHhhhhhhcc-----ccccccCCCcccCccccc
Confidence 34578999998665555 3 569999999999765432211 223456799999877655
No 178
>KOG1001 consensus Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily [Transcription; Replication, recombination and repair]
Probab=86.99 E-value=0.26 Score=51.33 Aligned_cols=49 Identities=27% Similarity=0.688 Sum_probs=36.4
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
..|.+|.+ ....+..+|||.+|..|....-.... ..+||.||..+..-.
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~c~~c~~~~i~~~~----------~~~~~~cr~~l~~~~ 503 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDFCVECLKKSIQQSE----------NAPCPLCRNVLKEKK 503 (674)
T ss_pred cccccccc-cccceeecccchHHHHHHHhcccccc----------CCCCcHHHHHHHHHH
Confidence 68999999 55556679999999999954432221 127999999998764
No 179
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=85.77 E-value=0.38 Score=43.78 Aligned_cols=48 Identities=29% Similarity=0.605 Sum_probs=35.6
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
+..|-+|....-.-+...|||.+|..|++.-. ..+ .+|++|.+++-..
T Consensus 241 Pf~c~icr~~f~~pVvt~c~h~fc~~ca~~~~--------qk~----~~c~vC~~~t~g~ 288 (313)
T KOG1813|consen 241 PFKCFICRKYFYRPVVTKCGHYFCEVCALKPY--------QKG----EKCYVCSQQTHGS 288 (313)
T ss_pred CccccccccccccchhhcCCceeehhhhcccc--------ccC----Ccceecccccccc
Confidence 45699998866666777999999999994332 222 3499999888765
No 180
>KOG4185 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=85.33 E-value=0.55 Score=44.12 Aligned_cols=44 Identities=32% Similarity=0.758 Sum_probs=30.6
Q ss_pred CcccccCccceE------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 303 PCVVCLERKCTV------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 303 ~C~vC~~~~~~v------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.|.+|.+.-... .-..|||.+|..|+-.+.... .+.||+||...
T Consensus 5 ~c~~c~~~~s~~~~~~~p~~l~c~h~~c~~c~~~l~~~~-----------~i~cpfcR~~~ 54 (296)
T KOG4185|consen 5 ECEICNEDYSSEDGDHIPRVLKCGHTICQNCASKLLGNS-----------RILCPFCRETT 54 (296)
T ss_pred ceeecCccccccCcccCCcccccCceehHhHHHHHhcCc-----------eeeccCCCCcc
Confidence 466665533333 222399999999997776544 56799999886
No 181
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=83.54 E-value=1 Score=29.27 Aligned_cols=28 Identities=25% Similarity=0.627 Sum_probs=14.6
Q ss_pred CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 318 GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 318 ~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
+||++.|..|+..+-.. ....||-||.+
T Consensus 19 ~Cgf~IC~~C~~~i~~~-----------~~g~CPgCr~~ 46 (48)
T PF14570_consen 19 ECGFQICRFCYHDILEN-----------EGGRCPGCREP 46 (48)
T ss_dssp TTS----HHHHHHHTTS-----------S-SB-TTT--B
T ss_pred cCCCcHHHHHHHHHHhc-----------cCCCCCCCCCC
Confidence 69999999999777542 23469999965
No 182
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=83.54 E-value=0.51 Score=45.93 Aligned_cols=31 Identities=35% Similarity=0.759 Sum_probs=24.2
Q ss_pred EeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 316 AKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 316 ~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..||-|.+-++|++..-.+. ...||.||.++
T Consensus 603 ~tPC~HifH~~CL~~WMd~y-----------kl~CPvCR~pL 633 (636)
T KOG0828|consen 603 LTPCHHIFHRQCLLQWMDTY-----------KLICPVCRCPL 633 (636)
T ss_pred ccchHHHHHHHHHHHHHhhh-----------cccCCccCCCC
Confidence 45899999999998776544 24599999875
No 183
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=82.52 E-value=0.81 Score=38.99 Aligned_cols=31 Identities=26% Similarity=0.618 Sum_probs=25.0
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHh
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLC 332 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc 332 (420)
=.|.+|...--.-++..|||.+|..|+..-.
T Consensus 197 F~C~iCKkdy~spvvt~CGH~FC~~Cai~~y 227 (259)
T COG5152 197 FLCGICKKDYESPVVTECGHSFCSLCAIRKY 227 (259)
T ss_pred eeehhchhhccchhhhhcchhHHHHHHHHHh
Confidence 3599998777666777999999999995543
No 184
>KOG3002 consensus Zn finger protein [General function prediction only]
Probab=82.44 E-value=0.84 Score=42.60 Aligned_cols=48 Identities=25% Similarity=0.396 Sum_probs=34.2
Q ss_pred CCCCCCcccccCcc-ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 298 STCPDPCVVCLERK-CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 298 ~~~~d~C~vC~~~~-~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..+.-.|.||.+.- ..+.--+.||..|..|... ....||+||.+|..+
T Consensus 45 ~~~lleCPvC~~~l~~Pi~QC~nGHlaCssC~~~---------------~~~~CP~Cr~~~g~~ 93 (299)
T KOG3002|consen 45 DLDLLDCPVCFNPLSPPIFQCDNGHLACSSCRTK---------------VSNKCPTCRLPIGNI 93 (299)
T ss_pred chhhccCchhhccCcccceecCCCcEehhhhhhh---------------hcccCCccccccccH
Confidence 34445699998744 3345556899999999832 345699999998866
No 185
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=81.30 E-value=2.3 Score=30.53 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=33.2
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.|.++.+-.-.-+..++||.++..|........ ...||+||..+..-.=.
T Consensus 6 ~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~-----------~~~~P~t~~~l~~~~l~ 55 (73)
T PF04564_consen 6 LCPITGELMRDPVILPSGHTYERSAIERWLEQN-----------GGTDPFTRQPLSESDLI 55 (73)
T ss_dssp B-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTT-----------SSB-TTT-SB-SGGGSE
T ss_pred CCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcC-----------CCCCCCCCCcCCcccce
Confidence 467777766666778999999999998877552 34699999887764333
No 186
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures]
Probab=80.88 E-value=0.72 Score=43.57 Aligned_cols=45 Identities=31% Similarity=0.634 Sum_probs=33.7
Q ss_pred cccccC----ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 304 CVVCLE----RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 304 C~vC~~----~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
|-.|.+ ++-...+.||.|.+-.+|+..+-..+ +.+.||.||.-+.
T Consensus 368 Cg~CGe~~Glk~e~LqALpCsHIfH~rCl~e~L~~n----------~~rsCP~CrklrS 416 (518)
T KOG1941|consen 368 CGLCGESIGLKNERLQALPCSHIFHLRCLQEILENN----------GTRSCPNCRKLRS 416 (518)
T ss_pred hhhhhhhhcCCcccccccchhHHHHHHHHHHHHHhC----------CCCCCccHHHHHh
Confidence 667765 44556889999999999998877555 3456999994443
No 187
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=80.44 E-value=1.2 Score=43.08 Aligned_cols=42 Identities=33% Similarity=0.721 Sum_probs=30.0
Q ss_pred CCCcccccCccc----eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 301 PDPCVVCLERKC----TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 301 ~d~C~vC~~~~~----~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
.-.|.||++|.- -+....|.|-+-..|+.... ...||+||..
T Consensus 175 LPTCpVCLERMD~s~~gi~t~~c~Hsfh~~cl~~w~--------------~~scpvcR~~ 220 (493)
T KOG0804|consen 175 LPTCPVCLERMDSSTTGILTILCNHSFHCSCLMKWW--------------DSSCPVCRYC 220 (493)
T ss_pred CCCcchhHhhcCccccceeeeecccccchHHHhhcc--------------cCcChhhhhh
Confidence 446999998653 23788999998777874443 3349999943
No 188
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=80.18 E-value=1.5 Score=39.35 Aligned_cols=72 Identities=21% Similarity=0.487 Sum_probs=46.4
Q ss_pred HHHcCCCCCCCCC---CCCCCcccccCccce----------EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCC
Q 014696 286 ARECGWRNSDSLS---TCPDPCVVCLERKCT----------VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPL 352 (420)
Q Consensus 286 a~~~g~~~~~~~~---~~~d~C~vC~~~~~~----------v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~ 352 (420)
|..-|+-+...++ .+...|.||..+.-. +.-..|+|.+-.-|-+-.|-..+ ...||+
T Consensus 206 As~iGfYs~~glPtkhl~d~vCaVCg~~~~~s~~eegvienty~LsCnHvFHEfCIrGWcivGK----------kqtCPY 275 (328)
T KOG1734|consen 206 ASTIGFYSPSGLPTKHLSDSVCAVCGQQIDVSVDEEGVIENTYKLSCNHVFHEFCIRGWCIVGK----------KQTCPY 275 (328)
T ss_pred HHHhcccCCCCCCCCCCCcchhHhhcchheeecchhhhhhhheeeecccchHHHhhhhheeecC----------CCCCch
Confidence 4444544444333 234679999865422 24556999988888888885552 345999
Q ss_pred CccccccccccCCCCCc
Q 014696 353 CRHGIVSFDKLPGTRPI 369 (420)
Q Consensus 353 CR~~I~~~~~~~~~~~~ 369 (420)
|+..|+ +.++|+ -||
T Consensus 276 CKekVd-l~rmfs-npW 290 (328)
T KOG1734|consen 276 CKEKVD-LKRMFS-NPW 290 (328)
T ss_pred HHHHhh-Hhhhcc-Ccc
Confidence 998875 456676 666
No 189
>KOG0311 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=79.21 E-value=0.36 Score=45.07 Aligned_cols=50 Identities=36% Similarity=0.738 Sum_probs=34.6
Q ss_pred CcccccCcc-ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 303 PCVVCLERK-CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 303 ~C~vC~~~~-~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.|.+|++-. -++-...|+|.||..|-..-... +..-||.||...++-..|
T Consensus 45 ~c~icl~llk~tmttkeClhrfc~~ci~~a~r~-----------gn~ecptcRk~l~SkrsL 95 (381)
T KOG0311|consen 45 ICPICLSLLKKTMTTKECLHRFCFDCIWKALRS-----------GNNECPTCRKKLVSKRSL 95 (381)
T ss_pred ccHHHHHHHHhhcccHHHHHHHHHHHHHHHHHh-----------cCCCCchHHhhccccccC
Confidence 488888632 23355679999999998544322 235699999988876554
No 190
>KOG4217 consensus Nuclear receptors of the nerve growth factor-induced protein B type [Transcription]
Probab=77.68 E-value=0.57 Score=45.35 Aligned_cols=48 Identities=35% Similarity=0.848 Sum_probs=36.1
Q ss_pred CCCCCcccccCccceEEEeCCCcc---cchhh-----------HHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHE---FCTQC-----------ALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~---~C~~C-----------~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
..+..|.||.|+. -|-|. .|..| ++|.|-.++.|++.+. .+.+|.+||
T Consensus 267 ~~e~~CAVCgDnA------aCqHYGvRTCEGCKGFFKRTVQKnaKYvClanKnCPVDKR--rRnRCQyCR 328 (605)
T KOG4217|consen 267 SAEGLCAVCGDNA------ACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKR--RRNRCQYCR 328 (605)
T ss_pred CccceeeecCChH------HhhhcCccccccchHHHHHHHhcCCeeEeecCCCCCcchh--hhhhchhhh
Confidence 4467899999965 45555 66666 4667878888888776 678899999
No 191
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=72.90 E-value=24 Score=33.35 Aligned_cols=249 Identities=10% Similarity=0.042 Sum_probs=127.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHh-CCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc--CCC-CCCccCCCCCHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEY-NPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES--GVD-INLRNYRGQTALMQ 90 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~--g~~-v~~~d~~g~TpL~~ 90 (420)
.++.-|..+.+.++.+....+++. .+.+.....+..|+-.+......+..+....+++. |-- -=..|..|.-.+..
T Consensus 20 ~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqk 99 (322)
T cd07920 20 HGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQK 99 (322)
T ss_pred hhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 344568888888888888888876 33444444555677788888888877655555543 111 11345566666666
Q ss_pred HHHcCcHHHHHHHHHc--C-CCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc
Q 014696 91 ACQHGHWEVVLTLILY--K-ANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE 167 (420)
Q Consensus 91 A~~~g~~~iv~~Ll~~--g-a~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
+...+..+....+++. + ......+ ..|...+..+...++.+..+.+++...+ . ......
T Consensus 100 ll~~~~~~~~~~i~~~l~~~~~~L~~d-~~gn~Vvq~~l~~~~~~~~~~i~~~l~~----~-------------~~~l~~ 161 (322)
T cd07920 100 LLESISEEQISLLVKELRGHVVELVKD-QNGNHVIQKCIEKFPPEDLQFIIDAFKG----N-------------CVALST 161 (322)
T ss_pred HHHhcCHHHHHHHHHHHHHCHHHHhhc-ccccHHHHHHHHhCCHHHHHHHHHHHHH----H-------------HHHHHc
Confidence 6666654444333332 1 1111223 3677777777777666666666543110 0 001111
Q ss_pred ccchhhHHHHHHhcCCHH----HHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHh---CCCccccccCC
Q 014696 168 RYFHLEVLLHLTLNGHVE----SVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAM---GASLTAENANG 240 (420)
Q Consensus 168 ~~~~~~~~l~aa~~g~~~----~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~---gad~~~~d~~G 240 (420)
...+...+-........+ +++.|..+-. . ...|..|...+..+...+..+..+.+++. ....-..++.|
T Consensus 162 ~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~---~-L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~G 237 (322)
T cd07920 162 HPYGCRVIQRCLEHCSEEQREPLLEEILEHAL---E-LVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFA 237 (322)
T ss_pred CccccHHHHHHHHhCCHHHHHHHHHHHHHHHH---H-HhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcch
Confidence 111112222222222222 3333332211 1 14466788888888888876544444432 11112456777
Q ss_pred CCHHHHHHHcCc----hhHHHHhhhCCC---CccccCCCCCCCchHHHHHHH
Q 014696 241 WTPLMVARSWHR----TGLEDILSTQPE---GRLEVLPSPYLALPLMSIVKI 285 (420)
Q Consensus 241 ~TpL~~A~~~g~----~~i~~lL~~~~~---~~~~~~~~~~~~~pl~~~l~~ 285 (420)
...+..+...+. ..+++-+..... .-.....+++|..-+..+++.
T Consensus 238 s~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn~Viq~~l~~ 289 (322)
T cd07920 238 SNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGNYVIQTALDV 289 (322)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCcccHHHHHHHHh
Confidence 777777777654 344444444321 112233466776555544433
No 192
>KOG1002 consensus Nucleotide excision repair protein RAD16 [Replication, recombination and repair]
Probab=67.18 E-value=3 Score=41.21 Aligned_cols=52 Identities=21% Similarity=0.571 Sum_probs=38.2
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..+-+|.+|-|..-..+...|-|.+|.-|...+-... +......||.|.-+.
T Consensus 534 k~~~~C~lc~d~aed~i~s~ChH~FCrlCi~eyv~~f-------~~~~nvtCP~C~i~L 585 (791)
T KOG1002|consen 534 KGEVECGLCHDPAEDYIESSCHHKFCRLCIKEYVESF-------MENNNVTCPVCHIGL 585 (791)
T ss_pred cCceeecccCChhhhhHhhhhhHHHHHHHHHHHHHhh-------hcccCCCCccccccc
Confidence 3355699999988787888899999999997765332 122347799998543
No 193
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=67.17 E-value=1.5 Score=31.31 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=16.2
Q ss_pred CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 318 GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 318 ~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
.|++.+-..|+........... ....+..-.||+|+.+|.
T Consensus 27 ~C~~~fH~~CL~~wf~~~~~~~-~~~~~~~G~CP~C~~~i~ 66 (70)
T PF11793_consen 27 SCGKKFHLLCLSEWFLSLEKSR-QSFIPIFGECPYCSSPIS 66 (70)
T ss_dssp T----B-SGGGHHHHHHHHSSS--TTT--EEE-TTT-SEEE
T ss_pred ccCCHHHHHHHHHHHHHcccCC-eeecccccCCcCCCCeee
Confidence 5777777777766654321111 111233345999998874
No 194
>smart00744 RINGv The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity. The RING-variant domain is reminiscent of both the RING and the PHD domains and may represent an evolutionary intermediate. To describe this domain the term PHD/LAP domain has been used in the past. Extended description: The RING-variant (RINGv) domain contains a C4HC3 zinc-finger-like motif similar to the PHD domain, while some of the spacing between the Cys/His residues follow a pattern somewhat closer to that found in the RING domain. The RINGv domain, similar to the RING, PHD and LIM domains, is thought to bind two zinc ions co-ordinated by the highly conserved Cys and His residues. RING variant domain: C-x (2) -C-x(10-45)-C-x (1) -C-x (7) -H-x(2)-C-x(11-25)-C-x(2)-C As opposed to a PHD: C-x(1-2) -C-x (7-13)-C-x(2-4)-C-x(4-5)-H-x(2)-C-x(10-21)-C-x(2)-C Class
Probab=65.59 E-value=9.7 Score=24.92 Aligned_cols=42 Identities=17% Similarity=0.521 Sum_probs=26.6
Q ss_pred CcccccC--ccceEEEeCCC-----cccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 303 PCVVCLE--RKCTVAAKGCD-----HEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 303 ~C~vC~~--~~~~v~~~~cg-----H~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
.|.||++ ..-.....||. |.+-..|+...-... +...||+|+
T Consensus 1 ~CrIC~~~~~~~~~l~~PC~C~G~~~~vH~~Cl~~W~~~~----------~~~~C~iC~ 49 (49)
T smart00744 1 ICRICHDEGDEGDPLVSPCRCKGSLKYVHQECLERWINES----------GNKTCEICK 49 (49)
T ss_pred CccCCCCCCCCCCeeEeccccCCchhHHHHHHHHHHHHHc----------CCCcCCCCC
Confidence 3677875 34445567885 556677777766544 223699985
No 195
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=64.51 E-value=5.6 Score=38.77 Aligned_cols=54 Identities=20% Similarity=0.365 Sum_probs=33.3
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCcccccCccce----EEEeCCCcccchhhHHHHhhcC
Q 014696 281 SIVKIARECGWRNSDSLSTCPDPCVVCLERKCT----VAAKGCDHEFCTQCALYLCSTN 335 (420)
Q Consensus 281 ~~l~~a~~~g~~~~~~~~~~~d~C~vC~~~~~~----v~~~~cgH~~C~~C~~~lc~~~ 335 (420)
.+.+.|++.... ..........|.+|+..... .....|||.+|..|+.......
T Consensus 127 ~~~~lA~e~i~s-~~~~~~~~~~C~iC~~e~~~~~~~f~~~~C~H~fC~~C~k~~iev~ 184 (384)
T KOG1812|consen 127 FAYKLAREAIVS-QLPSKLPKEECGICFVEDPEAEDMFSVLKCGHRFCKDCVKQHIEVK 184 (384)
T ss_pred HHHHHHHHhhcc-ccccccccccCccCccccccHhhhHHHhcccchhhhHHhHHHhhhh
Confidence 356667776654 11112234679999832211 1345799999999998876554
No 196
>COG4416 Com Mu-like prophage protein Com [General function prediction only]
Probab=64.41 E-value=6.6 Score=25.90 Aligned_cols=39 Identities=18% Similarity=0.404 Sum_probs=27.1
Q ss_pred cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCc
Q 014696 323 FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPI 369 (420)
Q Consensus 323 ~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~ 369 (420)
.|+.|...|.....+.... +.||-|. .+.+.++|.+-|.
T Consensus 6 RC~~CnKlLa~a~~~~yle------~KCPrCK--~vN~~~~~~e~~t 44 (60)
T COG4416 6 RCAKCNKLLAEAEGQAYLE------KKCPRCK--EVNEFYIKEEATT 44 (60)
T ss_pred ehHHHhHHHHhcccceeee------ecCCccc--eeeeeecccccch
Confidence 5778887776665444443 4499998 7777788876665
No 197
>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=62.30 E-value=7.6 Score=40.18 Aligned_cols=54 Identities=28% Similarity=0.593 Sum_probs=38.4
Q ss_pred CCcccccCccceEEEeCCCc-ccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDH-EFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH-~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
+-|.||-...-.+..-.||| +.|..|...+=...+. .--.+.||+||..++.+.
T Consensus 1 ~~c~ic~~s~~~~~~~s~~h~~v~~~~~~R~~~~~~~------~~~~~~~~vcr~~~~~~s 55 (669)
T KOG2231|consen 1 DSCAICAFSPDFVGRGSCGHNEVCATCVVRLRFELNN------RKCSNECPVCRREVETKS 55 (669)
T ss_pred CCcceeecCccccccccccccccchhhhhhhhhhccc------ccccccCcccccceeeec
Confidence 35888988888888888999 6999999776433321 011345899999666654
No 198
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=61.04 E-value=43 Score=35.87 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=66.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
-.+-.|..+.+.+.|--|++..- -.|+.++-|-.++|..|+.--+++ +..|-+.+|...|++
T Consensus 598 y~FKlALi~k~ydeVl~lI~ns~--------LvGqaiIaYLqKkgypeiAL~FVk----------D~~tRF~LaLe~gnl 659 (1202)
T KOG0292|consen 598 YRFKLALLNKKYDEVLHLIKNSN--------LVGQAIIAYLQKKGYPEIALHFVK----------DERTRFELALECGNL 659 (1202)
T ss_pred HHHHHHHHhhhhHHHHHHHHhcC--------cccHHHHHHHHhcCCcceeeeeec----------CcchheeeehhcCCH
Confidence 35667777888888877777542 235778888777777776544433 245667788999999
Q ss_pred HHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 98 EVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 98 ~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
|++-..-...-+.+.-. .--.-|...|+.+|+++-+++
T Consensus 660 e~ale~akkldd~d~w~-----rLge~Al~qgn~~IaEm~yQ~ 697 (1202)
T KOG0292|consen 660 EVALEAAKKLDDKDVWE-----RLGEEALRQGNHQIAEMCYQR 697 (1202)
T ss_pred HHHHHHHHhcCcHHHHH-----HHHHHHHHhcchHHHHHHHHH
Confidence 88866655544332211 122457788999999998864
No 199
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=60.93 E-value=13 Score=26.92 Aligned_cols=36 Identities=31% Similarity=0.572 Sum_probs=26.9
Q ss_pred ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 310 RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 310 ~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..|.++---|.|.|-..|-...-++. ..||++|+.-
T Consensus 45 ~eC~v~wG~CnHaFH~HCI~rWL~Tk------------~~CPld~q~w 80 (88)
T COG5194 45 DECPVVWGVCNHAFHDHCIYRWLDTK------------GVCPLDRQTW 80 (88)
T ss_pred CcceEEEEecchHHHHHHHHHHHhhC------------CCCCCCCcee
Confidence 45777776799999889887766554 3499999753
No 200
>PF10272 Tmpp129: Putative transmembrane protein precursor; InterPro: IPR018801 This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown.
Probab=60.09 E-value=28 Score=33.45 Aligned_cols=57 Identities=25% Similarity=0.570 Sum_probs=31.5
Q ss_pred CCCCCcccccCccceE-EEeCCC----------------cc-----cchhhHHHHhhcC--CCcccccCCCCCCCCCCCc
Q 014696 299 TCPDPCVVCLERKCTV-AAKGCD----------------HE-----FCTQCALYLCSTN--SSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v-~~~~cg----------------H~-----~C~~C~~~lc~~~--~~~~~~~~~~~~~~CP~CR 354 (420)
.+.|.|.-|+.....| ....|. .- =|..|.=...... ......+- .+..+||.||
T Consensus 269 ~e~e~CigC~~~~~~vkl~k~C~~~~~~g~~~~~~~~C~~C~CRPmWC~~Cm~kwFasrQd~~~~~~Wl-~~~~~CPtCR 347 (358)
T PF10272_consen 269 QELEPCIGCMQAQPNVKLVKRCADEEQEGSPLPNEPPCQQCYCRPMWCLECMGKWFASRQDQQHPETWL-SGKCPCPTCR 347 (358)
T ss_pred cccCCccccccCCCCcEEEeccCCcccCCcccccCCCCccccccchHHHHHHHHHhhhcCCCCChhhhh-cCCCCCCCCc
Confidence 5568888898877777 333342 11 1555554444333 11111121 3567899999
Q ss_pred cc
Q 014696 355 HG 356 (420)
Q Consensus 355 ~~ 356 (420)
..
T Consensus 348 a~ 349 (358)
T PF10272_consen 348 AK 349 (358)
T ss_pred cc
Confidence 75
No 201
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=57.53 E-value=5.8 Score=41.22 Aligned_cols=35 Identities=23% Similarity=0.440 Sum_probs=23.2
Q ss_pred EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 315 AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 315 ~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
.-.+|+|.||..|.-.+|..- ..||+||..-.+++
T Consensus 140 ~~k~c~H~FC~~Ci~sWsR~a------------qTCPiDR~EF~~v~ 174 (1134)
T KOG0825|consen 140 SEKHTAHYFCEECVGSWSRCA------------QTCPVDRGEFGEVK 174 (1134)
T ss_pred cccccccccHHHHhhhhhhhc------------ccCchhhhhhheee
Confidence 445688888888876665433 24888887766654
No 202
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=57.14 E-value=3.5 Score=39.41 Aligned_cols=45 Identities=20% Similarity=0.262 Sum_probs=0.0
Q ss_pred ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 312 CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 312 ~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+.++.||||..=.+.+++.+....+.-. ..-...||||-..+..
T Consensus 358 pthaF~PCGHv~SekTa~yWs~i~lPhGt---~~f~a~CPFCa~~L~g 402 (416)
T PF04710_consen 358 PTHAFNPCGHVCSEKTAKYWSQIPLPHGT---HAFHAACPFCATPLDG 402 (416)
T ss_dssp ------------------------------------------------
T ss_pred CceeecccccccchhhhhhhhcCCCCCCc---ccccccCCcccCcccC
Confidence 45588899998767777777655522111 1123579999988764
No 203
>PF03854 zf-P11: P-11 zinc finger; InterPro: IPR003224 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The RING-finger is a specialised type of Zn-finger of 40 to 60 residues that binds two atoms of zinc, and is probably involved in mediating protein-protein interactions [, , ]. There are two different variants, the C3HC4-type and a C3H2C3-type, which is clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain which has been implicated in a range of diverse biological processes. Several 3D-structures for RING-fingers are known [, ]. The 3D structure of the zinc ligation system is unique to the RING domain and is referred to as the 'cross-brace' motif. The spacing of the cysteines in such a domain is: C-x(2)-C-x(9 to 39)-C-x(1 to 3)-H-x(2 to 3)-C-x(2)-C-x(4 to 48)-C-x(2)-C Metal ligand pairs one and three co-ordinate to bind one zinc ion, whilst pairs two and four bind the second. This entry represents RING finger protein Z, a small polypeptide found in some negative-strand RNA viruses including Lassa fever virus, which plays a crucial role in virion assembly and budding. RING finger Z has been shown to interact with several host proteins, including promyelocytic leukemia protein and the eukaryotic translation initiation factor 4E [, ]. It is sufficient in the absence of any other viral proteins to release virus-like particles from the infected cell []. This protein is also responsible for arenavirus superinfection exclusion; expression of this protein in a host cell strongly and specifically inhibits areanavirus transcription and replication []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003723 RNA binding, 0008270 zinc ion binding; PDB: 2KO5_A.
Probab=56.72 E-value=8.6 Score=24.79 Aligned_cols=42 Identities=24% Similarity=0.583 Sum_probs=21.1
Q ss_pred CcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 303 PCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
-|..|+-..-..+. --.|..|.+|+-.+-+.. ..||+|..++
T Consensus 4 nCKsCWf~~k~Li~-C~dHYLCl~CLt~ml~~s------------~~C~iC~~~L 45 (50)
T PF03854_consen 4 NCKSCWFANKGLIK-CSDHYLCLNCLTLMLSRS------------DRCPICGKPL 45 (50)
T ss_dssp ---SS-S--SSEEE--SS-EEEHHHHHHT-SSS------------SEETTTTEE-
T ss_pred cChhhhhcCCCeee-ecchhHHHHHHHHHhccc------------cCCCcccCcC
Confidence 36666643333333 346889999996665433 4599998654
No 204
>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]
Probab=55.06 E-value=6.3 Score=38.59 Aligned_cols=56 Identities=29% Similarity=0.680 Sum_probs=38.5
Q ss_pred CCcccccCccceEEE-eCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCc
Q 014696 302 DPCVVCLERKCTVAA-KGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPI 369 (420)
Q Consensus 302 d~C~vC~~~~~~v~~-~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~ 369 (420)
-.|.+|..--+.-.- ..|||.+|..|....-+. ...||.||+.+..-..+|...+.
T Consensus 22 l~C~~C~~vl~~p~~~~~cgh~fC~~C~~~~~~~------------~~~cp~~~~~~~~~~~~~~~~~~ 78 (391)
T KOG0297|consen 22 LLCPICMSVLRDPVQTTTCGHRFCAGCLLESLSN------------HQKCPVCRQELTQAEELPVPRAL 78 (391)
T ss_pred ccCccccccccCCCCCCCCCCcccccccchhhcc------------CcCCcccccccchhhccCchHHH
Confidence 347777665444444 589999999999444322 23499999999988888743444
No 205
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=54.47 E-value=6.7 Score=40.81 Aligned_cols=51 Identities=14% Similarity=0.198 Sum_probs=37.5
Q ss_pred CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCc--ccccc
Q 014696 318 GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPI--KEITR 374 (420)
Q Consensus 318 ~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~--~~~~~ 374 (420)
.|+|.+|..|.+..-..-. +.+..-.|+||.++|..|.+.-.|-|+ ++..+
T Consensus 120 ~~~~~~CP~Ci~s~~DqL~------~~~k~c~H~FC~~Ci~sWsR~aqTCPiDR~EF~~ 172 (1134)
T KOG0825|consen 120 THVENQCPNCLKSCNDQLE------ESEKHTAHYFCEECVGSWSRCAQTCPVDRGEFGE 172 (1134)
T ss_pred hhhhhhhhHHHHHHHHHhh------ccccccccccHHHHhhhhhhhcccCchhhhhhhe
Confidence 4999999999976543332 223334599999999999999998888 44444
No 206
>KOG3800 consensus Predicted E3 ubiquitin ligase containing RING finger, subunit of transcription/repair factor TFIIH and CDK-activating kinase assembly factor [Posttranslational modification, protein turnover, chaperones]
Probab=54.20 E-value=8.9 Score=35.12 Aligned_cols=27 Identities=30% Similarity=0.817 Sum_probs=21.9
Q ss_pred eCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 317 KGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 317 ~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
-+|||.+|..|.-.+.+.. .-.||-|-
T Consensus 21 n~C~H~lCEsCvd~iF~~g-----------~~~CpeC~ 47 (300)
T KOG3800|consen 21 NECGHRLCESCVDRIFSLG-----------PAQCPECM 47 (300)
T ss_pred ccccchHHHHHHHHHHhcC-----------CCCCCccc
Confidence 3799999999998887655 44699885
No 207
>KOG4218 consensus Nuclear hormone receptor betaFTZ-F1 [Transcription]
Probab=52.86 E-value=6.9 Score=36.57 Aligned_cols=50 Identities=28% Similarity=0.642 Sum_probs=29.2
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHH-----------HHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCAL-----------YLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~-----------~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
.+.|.||.|+-.-.. -|-..|..|.= +.|+..-.|.+.+. .+.+||+||=
T Consensus 15 ~ElCPVCGDkVSGYH---YGLLTCESCKGFFKRTVQNnK~YtC~e~qnC~iDkT--qRKRCP~CRF 75 (475)
T KOG4218|consen 15 GELCPVCGDKVSGYH---YGLLTCESCKGFFKRTVQNNKQYTCSEEQNCHIDKT--QRKRCPSCRF 75 (475)
T ss_pred ccccccccCccccce---eeeeehhhhhhHHHHHhhcCcceecccccccccchH--hhccCCchhH
Confidence 356999998654332 24446666642 34444444444332 4678999983
No 208
>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]
Probab=52.56 E-value=4.6 Score=26.38 Aligned_cols=13 Identities=38% Similarity=0.940 Sum_probs=10.5
Q ss_pred CCCCCCCCccccc
Q 014696 346 GSIPCPLCRHGIV 358 (420)
Q Consensus 346 ~~~~CP~CR~~I~ 358 (420)
..+.||.|.+.|.
T Consensus 23 ~~irCp~Cg~rIl 35 (49)
T COG1996 23 RGIRCPYCGSRIL 35 (49)
T ss_pred CceeCCCCCcEEE
Confidence 4588999998874
No 209
>KOG1493 consensus Anaphase-promoting complex (APC), subunit 11 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=51.91 E-value=4.2 Score=29.05 Aligned_cols=36 Identities=31% Similarity=0.688 Sum_probs=23.6
Q ss_pred ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 312 CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 312 ~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
|.++--.|.|.+-..|.+..-.+.. ....||.||+.
T Consensus 44 CPLv~G~C~h~fh~hCI~~wl~~~t---------sq~~CPmcRq~ 79 (84)
T KOG1493|consen 44 CPLVWGYCLHAFHAHCILKWLNTPT---------SQGQCPMCRQT 79 (84)
T ss_pred CccHHHHHHHHHHHHHHHHHhcCcc---------ccccCCcchhe
Confidence 4444445888888888877654442 12469999985
No 210
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=51.89 E-value=12 Score=34.50 Aligned_cols=48 Identities=10% Similarity=-0.059 Sum_probs=36.8
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
-.|.+|....-+.+-.+|||. +|..|+- .. -...||.|.+.+-.++.+
T Consensus 344 ~~~~~~~~~~~st~~~~~~~n~~~~~~a~----~s----------~~~~~~~c~~~~~~~~~i 392 (394)
T KOG2113|consen 344 LKGTSAGFGLLSTIWSGGNMNLSPGSLAS----AS----------ASPTSSTCDHNDHTLVPI 392 (394)
T ss_pred cccccccCceeeeEeecCCcccChhhhhh----cc----------cCCccccccccceeeeec
Confidence 458999999888899999999 9999982 11 123499999877666544
No 211
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=49.09 E-value=1.6e+02 Score=27.63 Aligned_cols=216 Identities=14% Similarity=0.081 Sum_probs=100.0
Q ss_pred HHHHHHcCCHHHHHHHHHhC-CCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc---CCCCCCccCCCCCHHHHHHHcC
Q 014696 20 LVSAARDGDLQEAKALLEYN-PRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES---GVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 20 L~~Aa~~g~~~~v~~Ll~~~-~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~---g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+-.....+..+....+++.- +.+.....+..|.-.+..+...+..+....+++. ...--..|..|...+..+...+
T Consensus 61 vq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~ 140 (322)
T cd07920 61 IQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKF 140 (322)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhC
Confidence 44444455555444444331 2333334444556666666666665544444432 1111235677888888887777
Q ss_pred cHHHHHHHHHc--CCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 96 HWEVVLTLILY--KANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 96 ~~~iv~~Ll~~--ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
..+..+.+++. +--.....+..|...+.-.......+..+.+++.-. .....+.....+..
T Consensus 141 ~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~-----------------~~~~~L~~d~~Gn~ 203 (322)
T cd07920 141 PPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEIL-----------------EHALELVQDQFGNY 203 (322)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHH-----------------HHHHHHhcCCchhh
Confidence 66665555542 111111111256666665555554443333332100 00111111222333
Q ss_pred HHHHHHhcCCHHHHHHHHHcCC-CcccccccCCCCccHHHHHHHcCCHH----HHHHHHHhCC-----CccccccCCCCH
Q 014696 174 VLLHLTLNGHVESVQLLLDLGA-SVSEYLSVSGAGSTSLHYAACGGNAQ----CCQILIAMGA-----SLTAENANGWTP 243 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga-~~~~~~~~~~~g~TpLh~Aa~~g~~~----iv~~Ll~~ga-----d~~~~d~~G~Tp 243 (420)
.+.++...+..+..+.+++.-. ++-. ...+..|...+..+...+..+ +++.|+.... .--..|..|.-.
T Consensus 204 vvq~~l~~~~~~~~~~i~~~l~~~~~~-l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn~V 282 (322)
T cd07920 204 VVQHVLELGDPDDTSRIIEKLLGNIVQ-LSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGNYV 282 (322)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHH-HHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCcccHH
Confidence 3333355554443333332210 0111 145677888888888887654 3444433221 111346666666
Q ss_pred HHHHHHcCch
Q 014696 244 LMVARSWHRT 253 (420)
Q Consensus 244 L~~A~~~g~~ 253 (420)
+..+......
T Consensus 283 iq~~l~~~~~ 292 (322)
T cd07920 283 IQTALDVAKE 292 (322)
T ss_pred HHHHHHhCCH
Confidence 6665555443
No 212
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=48.55 E-value=15 Score=29.60 Aligned_cols=48 Identities=21% Similarity=0.478 Sum_probs=34.5
Q ss_pred CCcccccCccceEEEe----CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 302 DPCVVCLERKCTVAAK----GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~----~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
-+|-+|.|....-.+. -||-..|--|--.|..+++. -..||+|+..-.
T Consensus 81 YeCnIC~etS~ee~FLKPneCCgY~iCn~Cya~LWK~~~~---------ypvCPvCkTSFK 132 (140)
T PF05290_consen 81 YECNICKETSAEERFLKPNECCGYSICNACYANLWKFCNL---------YPVCPVCKTSFK 132 (140)
T ss_pred eeccCcccccchhhcCCcccccchHHHHHHHHHHHHHccc---------CCCCCccccccc
Confidence 4688888866555333 29999999999888877742 345999995433
No 213
>KOG2817 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=47.94 E-value=53 Score=31.71 Aligned_cols=31 Identities=26% Similarity=0.461 Sum_probs=20.2
Q ss_pred EeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 316 AKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 316 ~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
-..|||+.+.+=.-.+-...+. +-.||+|=.
T Consensus 352 ~L~CGHVISkdAlnrLS~ng~~---------sfKCPYCP~ 382 (394)
T KOG2817|consen 352 MLICGHVISKDALNRLSKNGSQ---------SFKCPYCPV 382 (394)
T ss_pred eeeccceecHHHHHHHhhCCCe---------eeeCCCCCc
Confidence 3479999998876555333321 245999953
No 214
>KOG1815 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=46.85 E-value=14 Score=36.86 Aligned_cols=35 Identities=29% Similarity=0.633 Sum_probs=27.4
Q ss_pred CCCcccccCccc-eEEEeCCCcccchhhHHHHhhcC
Q 014696 301 PDPCVVCLERKC-TVAAKGCDHEFCTQCALYLCSTN 335 (420)
Q Consensus 301 ~d~C~vC~~~~~-~v~~~~cgH~~C~~C~~~lc~~~ 335 (420)
...|-+|.+... .+...+|||.+|..|+..+-.+.
T Consensus 70 ~~~c~ic~~~~~~~~~~~~c~H~~c~~cw~~yl~~k 105 (444)
T KOG1815|consen 70 DVQCGICVESYDGEIIGLGCGHPFCPPCWTGYLGTK 105 (444)
T ss_pred cccCCcccCCCcchhhhcCCCcHHHHHHHHHHhhhe
Confidence 356777777665 47888999999999998876655
No 215
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=46.69 E-value=14 Score=24.79 Aligned_cols=30 Identities=37% Similarity=0.742 Sum_probs=21.2
Q ss_pred EeCCCcc--cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 316 AKGCDHE--FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 316 ~~~cgH~--~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
|.-|.++ +|..|+.... ...||.|-.+.++
T Consensus 22 A~ICSfECTFC~~C~e~~l--------------~~~CPNCgGelv~ 53 (57)
T PF06906_consen 22 AYICSFECTFCADCAETML--------------NGVCPNCGGELVR 53 (57)
T ss_pred ceEEeEeCcccHHHHHHHh--------------cCcCcCCCCcccc
Confidence 4456677 8999995553 2349999987665
No 216
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=46.13 E-value=2.7 Score=30.14 Aligned_cols=49 Identities=24% Similarity=0.550 Sum_probs=16.6
Q ss_pred CCCcccccCcc-------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERK-------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~-------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
-..|.||.|.- -.|+..-|+-..|..|--+-- ..+...||-|+..-.+.
T Consensus 9 ~qiCqiCGD~VGl~~~Ge~FVAC~eC~fPvCr~CyEYEr-----------keg~q~CpqCkt~ykr~ 64 (80)
T PF14569_consen 9 GQICQICGDDVGLTENGEVFVACHECAFPVCRPCYEYER-----------KEGNQVCPQCKTRYKRH 64 (80)
T ss_dssp S-B-SSS--B--B-SSSSB--S-SSS-----HHHHHHHH-----------HTS-SB-TTT--B----
T ss_pred CcccccccCccccCCCCCEEEEEcccCCccchhHHHHHh-----------hcCcccccccCCCcccc
Confidence 35788888732 233444466666666654432 23567799999554444
No 217
>PF04641 Rtf2: Rtf2 RING-finger
Probab=46.12 E-value=17 Score=33.32 Aligned_cols=50 Identities=24% Similarity=0.366 Sum_probs=34.5
Q ss_pred CcccccC----ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 303 PCVVCLE----RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 303 ~C~vC~~----~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
.|.|... ....|+..+|||+++.++...+- . ...||+|-.+..+-.-+|-
T Consensus 115 ~CPvt~~~~~~~~~fv~l~~cG~V~s~~alke~k-~------------~~~Cp~c~~~f~~~DiI~L 168 (260)
T PF04641_consen 115 ICPVTGKEFNGKHKFVYLRPCGCVFSEKALKELK-K------------SKKCPVCGKPFTEEDIIPL 168 (260)
T ss_pred ECCCCCcccCCceeEEEEcCCCCEeeHHHHHhhc-c------------cccccccCCccccCCEEEe
Confidence 4655553 33566888999999999998773 1 1239999988776654443
No 218
>KOG3161 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=44.52 E-value=12 Score=38.16 Aligned_cols=21 Identities=24% Similarity=0.700 Sum_probs=16.7
Q ss_pred EEeCCCcccchhhHHHHhhcC
Q 014696 315 AAKGCDHEFCTQCALYLCSTN 335 (420)
Q Consensus 315 ~~~~cgH~~C~~C~~~lc~~~ 335 (420)
++..|||..|..|+..+....
T Consensus 29 vsl~cghtic~~c~~~lyn~s 49 (861)
T KOG3161|consen 29 VSLQCGHTICGHCVQLLYNAS 49 (861)
T ss_pred ccccccchHHHHHHHhHhhcc
Confidence 455899999999998776444
No 219
>PLN03218 maturation of RBCL 1; Provisional
Probab=43.50 E-value=1.8e+02 Score=32.79 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=5.6
Q ss_pred HHHHHHHcCCHH
Q 014696 210 SLHYAACGGNAQ 221 (420)
Q Consensus 210 pLh~Aa~~g~~~ 221 (420)
.+...++.|+.+
T Consensus 655 LI~a~~k~G~~e 666 (1060)
T PLN03218 655 LVDVAGHAGDLD 666 (1060)
T ss_pred HHHHHHhCCCHH
Confidence 334444555554
No 220
>PF06221 zf-C2HC5: Putative zinc finger motif, C2HC5-type; InterPro: IPR009349 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This zinc finger appears to be common in activating signal cointegrator 1/thyroid receptor interacting protein 4. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=43.37 E-value=12 Score=25.33 Aligned_cols=29 Identities=31% Similarity=0.863 Sum_probs=19.7
Q ss_pred cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 323 FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 323 ~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
-|..|.+.+|.... + ..+||+|-.++.+.
T Consensus 20 NCl~CGkIiC~~Eg-------~--~~pC~fCg~~l~~~ 48 (57)
T PF06221_consen 20 NCLNCGKIICEQEG-------P--LGPCPFCGTPLLSS 48 (57)
T ss_pred cccccChhhccccc-------C--cCcCCCCCCcccCH
Confidence 36677777775551 1 56799999877653
No 221
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=42.33 E-value=17 Score=23.30 Aligned_cols=17 Identities=24% Similarity=0.624 Sum_probs=12.7
Q ss_pred CCCCCCCcccccccccc
Q 014696 347 SIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 347 ~~~CP~CR~~I~~~~~~ 363 (420)
...||+|.+.+.-..+-
T Consensus 21 ~~~Cp~CG~~~~~~~~~ 37 (46)
T PRK00398 21 GVRCPYCGYRILFKERP 37 (46)
T ss_pred ceECCCCCCeEEEccCC
Confidence 57899999888754443
No 222
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=40.69 E-value=1.5e+02 Score=33.63 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=21.9
Q ss_pred hhhHHHHHHhcCCHHHHHHHHHcCCCcc
Q 014696 171 HLEVLLHLTLNGHVESVQLLLDLGASVS 198 (420)
Q Consensus 171 ~~~~~l~aa~~g~~~~v~~Ll~~ga~~~ 198 (420)
....+++|+..+..++++++-.+|-+.-
T Consensus 563 ~~dLlIWAvL~~R~~MA~~~W~~gee~~ 590 (1381)
T KOG3614|consen 563 IRDLLIWAVLLNRQGMAKCLWAHGEEAV 590 (1381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHhchhHH
Confidence 4455777889999999999998876654
No 223
>TIGR02652 conserved hypothetical protein TIGR02652, cyanobacterial. Members of this family of conserved hypothetical proteins are found, so far, only in the Cyanobacteria. Members are about 170 amino acids long and share a motif CxxCx(14)CxxH near the amino end.
Probab=40.29 E-value=10 Score=30.51 Aligned_cols=14 Identities=43% Similarity=1.037 Sum_probs=11.3
Q ss_pred CCCCCCCccccccc
Q 014696 347 SIPCPLCRHGIVSF 360 (420)
Q Consensus 347 ~~~CP~CR~~I~~~ 360 (420)
.+.||.||+.|.-+
T Consensus 9 ei~CPhCRQ~ipAL 22 (163)
T TIGR02652 9 EIRCPHCRQNIPAL 22 (163)
T ss_pred cCcCchhhcccchh
Confidence 47899999887655
No 224
>PF14369 zf-RING_3: zinc-finger
Probab=39.98 E-value=16 Score=22.01 Aligned_cols=12 Identities=42% Similarity=1.171 Sum_probs=9.2
Q ss_pred CCCCCCcccccc
Q 014696 348 IPCPLCRHGIVS 359 (420)
Q Consensus 348 ~~CP~CR~~I~~ 359 (420)
+.||.|..+.++
T Consensus 22 ~~CP~C~~gFvE 33 (35)
T PF14369_consen 22 VACPRCHGGFVE 33 (35)
T ss_pred cCCcCCCCcEeE
Confidence 459999987665
No 225
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=39.98 E-value=24 Score=23.97 Aligned_cols=39 Identities=31% Similarity=0.558 Sum_probs=21.1
Q ss_pred cccccCccc-eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCC
Q 014696 304 CVVCLERKC-TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPL 352 (420)
Q Consensus 304 C~vC~~~~~-~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~ 352 (420)
|.+.....- .|....|||.+.....+.+-.. .+...||+
T Consensus 14 CPiT~~~~~~PV~s~~C~H~fek~aI~~~i~~----------~~~~~CPv 53 (57)
T PF11789_consen 14 CPITLQPFEDPVKSKKCGHTFEKEAILQYIQR----------NGSKRCPV 53 (57)
T ss_dssp -TTTSSB-SSEEEESSS--EEEHHHHHHHCTT----------TS-EE-SC
T ss_pred CCCcCChhhCCcCcCCCCCeecHHHHHHHHHh----------cCCCCCCC
Confidence 444443222 3455689999999988887622 24567997
No 226
>KOG2660 consensus Locus-specific chromosome binding proteins [Function unknown]
Probab=39.10 E-value=15 Score=34.40 Aligned_cols=47 Identities=23% Similarity=0.501 Sum_probs=31.2
Q ss_pred CCcccccCccceE-EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTV-AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v-~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..|.+|..-.-+- -..-|=|.||..|.......++ .||.|...|-..
T Consensus 16 itC~LC~GYliDATTI~eCLHTFCkSCivk~l~~~~------------~CP~C~i~ih~t 63 (331)
T KOG2660|consen 16 ITCRLCGGYLIDATTITECLHTFCKSCIVKYLEESK------------YCPTCDIVIHKT 63 (331)
T ss_pred eehhhccceeecchhHHHHHHHHHHHHHHHHHHHhc------------cCCccceeccCc
Confidence 4567776522111 1224999999999988876653 488888777665
No 227
>PF09654 DUF2396: Protein of unknown function (DUF2396); InterPro: IPR013472 These conserved hypothetical proteins have so far been found only in the Cyanobacteria. They are about 170 amino acids long and contain a CxxCx(14)CxxH motif near the N terminus.
Probab=38.89 E-value=11 Score=30.23 Aligned_cols=14 Identities=43% Similarity=1.018 Sum_probs=11.2
Q ss_pred CCCCCCCccccccc
Q 014696 347 SIPCPLCRHGIVSF 360 (420)
Q Consensus 347 ~~~CP~CR~~I~~~ 360 (420)
.+.||.||+.|.-+
T Consensus 6 ei~CPhCRq~ipAL 19 (161)
T PF09654_consen 6 EIQCPHCRQTIPAL 19 (161)
T ss_pred cCcCchhhcccchh
Confidence 47899999887655
No 228
>KOG4367 consensus Predicted Zn-finger protein [Function unknown]
Probab=37.63 E-value=18 Score=35.00 Aligned_cols=31 Identities=26% Similarity=0.494 Sum_probs=24.9
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
+-.|.||..-...-...+|||..|..|++..
T Consensus 4 elkc~vc~~f~~epiil~c~h~lc~~ca~~~ 34 (699)
T KOG4367|consen 4 ELKCPVCGSFYREPIILPCSHNLCQACARNI 34 (699)
T ss_pred cccCceehhhccCceEeecccHHHHHHHHhh
Confidence 3458899876666688899999999999743
No 229
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=37.14 E-value=11 Score=21.97 Aligned_cols=11 Identities=36% Similarity=0.803 Sum_probs=6.1
Q ss_pred CCCCCCCCccc
Q 014696 346 GSIPCPLCRHG 356 (420)
Q Consensus 346 ~~~~CP~CR~~ 356 (420)
....||-|...
T Consensus 20 ~~r~C~~Cg~~ 30 (32)
T PF09297_consen 20 WARRCPSCGHE 30 (32)
T ss_dssp S-EEESSSS-E
T ss_pred CEeECCCCcCE
Confidence 45668877753
No 230
>PLN03218 maturation of RBCL 1; Provisional
Probab=36.94 E-value=2.8e+02 Score=31.27 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=30.1
Q ss_pred hhHHHHH-HhcCCHHHHH----HHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHH----HhCCCccc
Q 014696 172 LEVLLHL-TLNGHVESVQ----LLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILI----AMGASLTA 235 (420)
Q Consensus 172 ~~~~l~a-a~~g~~~~v~----~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll----~~gad~~~ 235 (420)
...++.+ +..|..+-+. .+.+.|..++.. .-.+.+...++.|..+.+..++ +.|..++.
T Consensus 722 yN~LI~gy~k~G~~eeAlelf~eM~~~Gi~Pd~~-----Ty~sLL~a~~k~G~le~A~~l~~~M~k~Gi~pd~ 789 (1060)
T PLN03218 722 MNALITALCEGNQLPKALEVLSEMKRLGLCPNTI-----TYSILLVASERKDDADVGLDLLSQAKEDGIKPNL 789 (1060)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCH
Confidence 3445555 6777755433 334456655532 1234445555667766554444 34665543
No 231
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=36.73 E-value=13 Score=34.41 Aligned_cols=55 Identities=13% Similarity=0.269 Sum_probs=44.2
Q ss_pred CCCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCC
Q 014696 301 PDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGT 366 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~ 366 (420)
.-.|++|+...-.+...+|||. +|+.|+-..|-.. ...||+|-+.+.+...++.+
T Consensus 136 ti~~iqq~tnt~I~T~v~~~~~Vf~Vtg~~~nC~kr-----------a~s~eie~ta~~ra~~i~d~ 191 (394)
T KOG2113|consen 136 TIKRIQQFTNTYIATPVRCGEPVFCVTGAPKNCVKR-----------ARSCEIEQTAVTRAGQIHDT 191 (394)
T ss_pred ccchheecccceEeeeccCCCceEEEecCCcchhhh-----------ccccchhhhhhhhhhccccC
Confidence 3458999998888889999999 9999975555333 34599999999998888875
No 232
>PRK11032 hypothetical protein; Provisional
Probab=36.69 E-value=36 Score=28.61 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=21.6
Q ss_pred eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 313 TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 313 ~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
..++..|||..+.. .|....+||-|- -..|.+.|-
T Consensus 124 ~LvC~~Cg~~~~~~----------------~p~~i~pCp~C~--~~~F~R~~~ 158 (160)
T PRK11032 124 NLVCEKCHHHLAFY----------------TPEVLPLCPKCG--HDQFQRRPF 158 (160)
T ss_pred eEEecCCCCEEEec----------------CCCcCCCCCCCC--CCeeeeCCC
Confidence 34556788864332 234556799998 456666554
No 233
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=35.38 E-value=17 Score=19.58 Aligned_cols=13 Identities=23% Similarity=0.488 Sum_probs=8.5
Q ss_pred CCCCCCCCCcccc
Q 014696 345 IGSIPCPLCRHGI 357 (420)
Q Consensus 345 ~~~~~CP~CR~~I 357 (420)
.....||.|-.+|
T Consensus 11 ~~~~fC~~CG~~l 23 (23)
T PF13240_consen 11 DDAKFCPNCGTPL 23 (23)
T ss_pred CcCcchhhhCCcC
Confidence 4566788887553
No 234
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=34.73 E-value=65 Score=32.16 Aligned_cols=162 Identities=17% Similarity=0.187 Sum_probs=78.7
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHH
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWE 98 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~ 98 (420)
.+..|+.+|+.+.|..+++...-+... ....|+....+--.+|..+++-.+.. | -.+=+.+|.+-|+++
T Consensus 267 ~fk~av~~~d~~~v~~~i~~~~ll~~i-~~~~~~~i~~fL~~~G~~e~AL~~~~---D-------~~~rFeLAl~lg~L~ 335 (443)
T PF04053_consen 267 EFKTAVLRGDFEEVLRMIAASNLLPNI-PKDQGQSIARFLEKKGYPELALQFVT---D-------PDHRFELALQLGNLD 335 (443)
T ss_dssp HHHHHHHTT-HHH-----HHHHTGGG---HHHHHHHHHHHHHTT-HHHHHHHSS-----------HHHHHHHHHHCT-HH
T ss_pred HHHHHHHcCChhhhhhhhhhhhhcccC-ChhHHHHHHHHHHHCCCHHHHHhhcC---C-------hHHHhHHHHhcCCHH
Confidence 467788888888876666532111111 11123556666666777776655532 1 135577888888888
Q ss_pred HHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHH
Q 014696 99 VVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHL 178 (420)
Q Consensus 99 iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a 178 (420)
.+.-+.+...+... -..-=..|...|+.++++.-+.+. .+ ....++..
T Consensus 336 ~A~~~a~~~~~~~~-----W~~Lg~~AL~~g~~~lAe~c~~k~--------------------------~d-~~~L~lLy 383 (443)
T PF04053_consen 336 IALEIAKELDDPEK-----WKQLGDEALRQGNIELAEECYQKA--------------------------KD-FSGLLLLY 383 (443)
T ss_dssp HHHHHCCCCSTHHH-----HHHHHHHHHHTTBHHHHHHHHHHC--------------------------T--HHHHHHHH
T ss_pred HHHHHHHhcCcHHH-----HHHHHHHHHHcCCHHHHHHHHHhh--------------------------cC-ccccHHHH
Confidence 77666543322111 112235566778888777666431 11 11122233
Q ss_pred HhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCH-HHHHHHHHhC
Q 014696 179 TLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNA-QCCQILIAMG 230 (420)
Q Consensus 179 a~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~-~iv~~Ll~~g 230 (420)
...|+.+-++.|.+.-. ..++-+.+++.|...|+. +++++|++.|
T Consensus 384 ~~~g~~~~L~kl~~~a~-------~~~~~n~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 384 SSTGDREKLSKLAKIAE-------ERGDINIAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp HHCT-HHHHHHHHHHHH-------HTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred HHhCCHHHHHHHHHHHH-------HccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 55566666666654311 111224556666666655 4666666643
No 235
>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.
Probab=34.52 E-value=41 Score=21.08 Aligned_cols=16 Identities=25% Similarity=0.713 Sum_probs=11.0
Q ss_pred CCCCCCCCCcc-ccccc
Q 014696 345 IGSIPCPLCRH-GIVSF 360 (420)
Q Consensus 345 ~~~~~CP~CR~-~I~~~ 360 (420)
.....||.|.+ .+.++
T Consensus 24 ~~~~~CP~Cg~~~~~r~ 40 (42)
T PF09723_consen 24 DDPVPCPECGSTEVRRV 40 (42)
T ss_pred CCCCcCCCCCCCceEEe
Confidence 34577999998 55443
No 236
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.27 E-value=36 Score=30.47 Aligned_cols=46 Identities=13% Similarity=0.153 Sum_probs=31.5
Q ss_pred CCcccccCcc----ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 302 DPCVVCLERK----CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 302 d~C~vC~~~~----~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
-.|.+|.+.. .-.+..+|||++|..|...+- ++...||+|-.+...
T Consensus 222 yiCpvtrd~LtNt~~ca~Lr~sg~Vv~~ecvEkli------------r~D~v~pv~d~plkd 271 (303)
T KOG3039|consen 222 YICPVTRDTLTNTTPCAVLRPSGHVVTKECVEKLI------------RKDMVDPVTDKPLKD 271 (303)
T ss_pred eecccchhhhcCccceEEeccCCcEeeHHHHHHhc------------cccccccCCCCcCcc
Confidence 4577777633 223677999999999997763 234459988855443
No 237
>PRK14873 primosome assembly protein PriA; Provisional
Probab=31.60 E-value=33 Score=36.20 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=45.7
Q ss_pred CCchHHHHHHHHHHcCCCCCCCCCC-CCCCcccccCccceEEEeCCCcc-cchhhHHHHhhcC----CCcccccCCCCCC
Q 014696 275 LALPLMSIVKIARECGWRNSDSLST-CPDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTN----SSCVVAKGPIGSI 348 (420)
Q Consensus 275 ~~~pl~~~l~~a~~~g~~~~~~~~~-~~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~----~~~~~~~~~~~~~ 348 (420)
...++..+++...+.| +.+..+.. ... ..+.+..||+. .|..|.-.+-.+. -.|..|+......
T Consensus 354 ls~~l~~~i~~~L~~g-qvll~lnRrGya---------p~l~C~~Cg~~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~~p~ 423 (665)
T PRK14873 354 LPSLAFRAARDALEHG-PVLVQVPRRGYV---------PSLACARCRTPARCRHCTGPLGLPSAGGTPRCRWCGRAAPDW 423 (665)
T ss_pred cCHHHHHHHHHHHhcC-cEEEEecCCCCC---------CeeEhhhCcCeeECCCCCCceeEecCCCeeECCCCcCCCcCc
Confidence 3445677777777888 66554431 122 23344678888 8888876655443 2366665555566
Q ss_pred CCCCCcccc
Q 014696 349 PCPLCRHGI 357 (420)
Q Consensus 349 ~CP~CR~~I 357 (420)
.||-|.+.-
T Consensus 424 ~Cp~Cgs~~ 432 (665)
T PRK14873 424 RCPRCGSDR 432 (665)
T ss_pred cCCCCcCCc
Confidence 899998763
No 238
>COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]
Probab=30.77 E-value=14 Score=30.36 Aligned_cols=21 Identities=24% Similarity=0.517 Sum_probs=17.1
Q ss_pred CCCCCCCCCcccc-ccccccCC
Q 014696 345 IGSIPCPLCRHGI-VSFDKLPG 365 (420)
Q Consensus 345 ~~~~~CP~CR~~I-~~~~~~~~ 365 (420)
|....||.|.... .+++.+|+
T Consensus 41 PPr~~Cp~C~~~~~~E~vels~ 62 (140)
T COG1545 41 PPRAYCPKCGSETELEWVELSG 62 (140)
T ss_pred CCcccCCCCCCCCceEEEEeCC
Confidence 4467799999994 49999887
No 239
>PF04423 Rad50_zn_hook: Rad50 zinc hook motif; InterPro: IPR007517 The Mre11 complex (Mre11 Rad50 Nbs1) is central to chromosomal maintenance and functions in homologous recombination, telomere maintenance and sister chromatid association. The Rad50 coiled-coil region contains a dimer interface at the apex of the coiled coils in which pairs of conserved Cys-X-X-Cys motifs form interlocking hooks that bind one Zn ion. This alignment includes the zinc hook motif and a short stretch of coiled-coil on either side.; GO: 0004518 nuclease activity, 0005524 ATP binding, 0008270 zinc ion binding, 0006281 DNA repair; PDB: 1L8D_B.
Probab=30.29 E-value=17 Score=24.18 Aligned_cols=11 Identities=36% Similarity=0.896 Sum_probs=5.4
Q ss_pred CCCCCcccccc
Q 014696 349 PCPLCRHGIVS 359 (420)
Q Consensus 349 ~CP~CR~~I~~ 359 (420)
.||+|.+++.+
T Consensus 22 ~CPlC~r~l~~ 32 (54)
T PF04423_consen 22 CCPLCGRPLDE 32 (54)
T ss_dssp E-TTT--EE-H
T ss_pred cCCCCCCCCCH
Confidence 59999977654
No 240
>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.
Probab=28.79 E-value=32 Score=19.13 Aligned_cols=10 Identities=30% Similarity=1.165 Sum_probs=8.1
Q ss_pred CCCCCCcccc
Q 014696 348 IPCPLCRHGI 357 (420)
Q Consensus 348 ~~CP~CR~~I 357 (420)
..||+|-..+
T Consensus 2 v~CPiC~~~v 11 (26)
T smart00734 2 VQCPVCFREV 11 (26)
T ss_pred CcCCCCcCcc
Confidence 4699998776
No 241
>PLN02436 cellulose synthase A
Probab=28.37 E-value=52 Score=36.22 Aligned_cols=50 Identities=24% Similarity=0.563 Sum_probs=34.3
Q ss_pred CCCcccccCcc-------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 301 PDPCVVCLERK-------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 301 ~d~C~vC~~~~-------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
...|.||.|.- -.|++--||-..|+.|--+-- ..++..||-|+..-.+..
T Consensus 36 ~~iCqICGD~Vg~t~dGe~FVACn~C~fpvCr~Cyeyer-----------~eg~~~Cpqckt~Y~r~k 92 (1094)
T PLN02436 36 GQTCQICGDEIELTVDGEPFVACNECAFPVCRPCYEYER-----------REGNQACPQCKTRYKRIK 92 (1094)
T ss_pred CccccccccccCcCCCCCEEEeeccCCCccccchhhhhh-----------hcCCccCcccCCchhhcc
Confidence 35899999853 445565588888888773321 235677999998877654
No 242
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.06 E-value=38 Score=26.78 Aligned_cols=15 Identities=27% Similarity=0.682 Sum_probs=10.7
Q ss_pred CCCCCCCCCcccccc
Q 014696 345 IGSIPCPLCRHGIVS 359 (420)
Q Consensus 345 ~~~~~CP~CR~~I~~ 359 (420)
.....||.|...|-.
T Consensus 37 ati~qcp~csasirg 51 (160)
T COG4306 37 ATITQCPICSASIRG 51 (160)
T ss_pred HHHhcCCccCCcccc
Confidence 345669999987754
No 243
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=27.74 E-value=43 Score=29.72 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=34.3
Q ss_pred HHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 190 LLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 190 Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
|+++|+..| ..|....|+=.+|.+.++....+.|++.|+..
T Consensus 1 lle~ga~wn---~id~~n~t~gd~a~ern~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 1 LLEYGAGWN---FIDYENKTVGDLALERNQSRLYRRLVEAGVPS 41 (271)
T ss_pred CcccCCCcc---ccChhhCCchHHHHHccHHHHHHHHHHcCCch
Confidence 467888888 66778889999999999999999999988753
No 244
>PF15616 TerY-C: TerY-C metal binding domain
Probab=27.53 E-value=48 Score=26.85 Aligned_cols=39 Identities=26% Similarity=0.662 Sum_probs=28.8
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.--|.-|......+.. .||+.+|.. .+....||-|.+.+
T Consensus 77 ~PgCP~CGn~~~fa~C-~CGkl~Ci~-----------------g~~~~~CPwCg~~g 115 (131)
T PF15616_consen 77 APGCPHCGNQYAFAVC-GCGKLFCID-----------------GEGEVTCPWCGNEG 115 (131)
T ss_pred CCCCCCCcChhcEEEe-cCCCEEEeC-----------------CCCCEECCCCCCee
Confidence 3458889888777777 899988765 23456799998654
No 245
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=27.30 E-value=36 Score=18.95 Aligned_cols=8 Identities=38% Similarity=1.178 Sum_probs=5.2
Q ss_pred CCCCcccc
Q 014696 350 CPLCRHGI 357 (420)
Q Consensus 350 CP~CR~~I 357 (420)
||-|+..|
T Consensus 3 CP~C~~~V 10 (26)
T PF10571_consen 3 CPECGAEV 10 (26)
T ss_pred CCCCcCCc
Confidence 66666655
No 246
>KOG2807 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription; Replication, recombination and repair]
Probab=26.90 E-value=27 Score=32.58 Aligned_cols=56 Identities=36% Similarity=0.703 Sum_probs=36.7
Q ss_pred ccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc-------cCCCCCcccccccCccceeee-ccccCC
Q 014696 322 EFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK-------LPGTRPIKEITRTSSLSLTFC-TCSVDH 389 (420)
Q Consensus 322 ~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 389 (420)
.+|.+|.-..|+.. +.||.|.-..++-.. |=+-+|+.|++.+.+.--.+| .|..+.
T Consensus 277 y~CP~CkakvCsLP------------~eCpiC~ltLVss~hLARSyhhL~PL~~F~Eip~~~~~~~~~Cf~C~~~~ 340 (378)
T KOG2807|consen 277 YFCPQCKAKVCSLP------------IECPICSLTLVSSPHLARSYHHLFPLKPFVEIPETEYNGSRFCFACQGEL 340 (378)
T ss_pred eeCCcccCeeecCC------------ccCCccceeEecchHHHHHHHhhcCCcchhhccccccCCCcceeeecccc
Confidence 48888885555433 459999987776544 222277788888744455569 994443
No 247
>KOG3113 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.43 E-value=1.1e+02 Score=27.71 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=31.1
Q ss_pred CccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 309 ERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 309 ~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
+.-..++..+|||.+=.+-+...-+.. |++|-+....-..++-
T Consensus 123 g~~~F~~l~~CGcV~SerAlKeikas~--------------C~~C~a~y~~~dvIvl 165 (293)
T KOG3113|consen 123 GKYRFCALRCCGCVFSERALKEIKASV--------------CHVCGAAYQEDDVIVL 165 (293)
T ss_pred ceEEEEEEeccceeccHHHHHHhhhcc--------------ccccCCcccccCeEee
Confidence 344556888999998777776665444 9999998877666554
No 248
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=26.29 E-value=60 Score=35.81 Aligned_cols=49 Identities=24% Similarity=0.562 Sum_probs=33.5
Q ss_pred CCcccccCc-------cceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 302 DPCVVCLER-------KCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 302 d~C~vC~~~-------~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
..|.||.|. ...|++--||-..|+.|--|-- ..|+..||-|+..-.+..
T Consensus 18 qiCqICGD~vg~~~~Ge~FVAC~eC~FPVCrpCYEYEr-----------~eG~q~CPqCktrYkr~k 73 (1079)
T PLN02638 18 QVCQICGDNVGKTVDGEPFVACDVCAFPVCRPCYEYER-----------KDGNQSCPQCKTKYKRHK 73 (1079)
T ss_pred ceeeecccccCcCCCCCEEEEeccCCCccccchhhhhh-----------hcCCccCCccCCchhhhc
Confidence 589999975 2445666677778888773321 246778999998777554
No 249
>smart00659 RPOLCX RNA polymerase subunit CX. present in RNA polymerase I, II and III
Probab=25.98 E-value=23 Score=22.59 Aligned_cols=14 Identities=21% Similarity=0.479 Sum_probs=11.6
Q ss_pred CCCCCCCCCccccc
Q 014696 345 IGSIPCPLCRHGIV 358 (420)
Q Consensus 345 ~~~~~CP~CR~~I~ 358 (420)
...+.||.|.+.|.
T Consensus 17 ~~~irC~~CG~rIl 30 (44)
T smart00659 17 KDVVRCRECGYRIL 30 (44)
T ss_pred CCceECCCCCceEE
Confidence 35688999999887
No 250
>PHA02825 LAP/PHD finger-like protein; Provisional
Probab=25.57 E-value=1.4e+02 Score=25.06 Aligned_cols=65 Identities=12% Similarity=0.218 Sum_probs=37.0
Q ss_pred CCCCCcccccCccceEEEeCCCcc-----cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCCCCCccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHE-----FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPGTRPIKEIT 373 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~-----~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~~~~~~~~~ 373 (420)
.....|-||.+..-. ...||.-. .-..|+....... +...|++|+.+-.=..+..+-++|+--.
T Consensus 6 ~~~~~CRIC~~~~~~-~~~PC~CkGs~k~VH~sCL~rWi~~s----------~~~~CeiC~~~Y~i~~~~kpl~~W~~~~ 74 (162)
T PHA02825 6 LMDKCCWICKDEYDV-VTNYCNCKNENKIVHKECLEEWINTS----------KNKSCKICNGPYNIKKNYKKCTKWRCSF 74 (162)
T ss_pred CCCCeeEecCCCCCC-ccCCcccCCCchHHHHHHHHHHHhcC----------CCCcccccCCeEEEEEecCCCccccccC
Confidence 345678899887543 34566532 2456666665543 4556999998753332222225664444
Q ss_pred c
Q 014696 374 R 374 (420)
Q Consensus 374 ~ 374 (420)
+
T Consensus 75 ~ 75 (162)
T PHA02825 75 R 75 (162)
T ss_pred c
Confidence 3
No 251
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=25.51 E-value=59 Score=30.25 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=23.5
Q ss_pred eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 313 TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 313 ~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
+-++.||||..-.+-.+|.-....+.-.. .-...||||-+..+
T Consensus 372 thaF~PCGHv~sekt~~YWs~iplPhGT~---~f~a~CPFC~~~L~ 414 (429)
T KOG3842|consen 372 THAFNPCGHVCSEKTVKYWSQIPLPHGTH---AFHAACPFCATQLA 414 (429)
T ss_pred ccccCCcccccchhhhhHhhcCcCCCccc---cccccCcchhhhhc
Confidence 34677899965555555543322111111 12356999986654
No 252
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=25.10 E-value=2.5e+02 Score=28.11 Aligned_cols=160 Identities=16% Similarity=0.098 Sum_probs=94.9
Q ss_pred HHHHHHcCcHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHH
Q 014696 55 LHYSAAQGHHEIVSLLIE-SGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRC 133 (420)
Q Consensus 55 Lh~Aa~~g~~~iv~~Ll~-~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~i 133 (420)
+..|+.+++.+-|..+++ ...-++.....|+....+.-..|..|++-.+.. +-.+=+.+|..-|+.+.
T Consensus 268 fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~-----------D~~~rFeLAl~lg~L~~ 336 (443)
T PF04053_consen 268 FKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT-----------DPDHRFELALQLGNLDI 336 (443)
T ss_dssp HHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-HHH
T ss_pred HHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC-----------ChHHHhHHHHhcCCHHH
Confidence 456888999888766665 222233444446667777777888877765541 33566889999999998
Q ss_pred HHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHH
Q 014696 134 IRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHY 213 (420)
Q Consensus 134 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~ 213 (420)
+.-+.... +.........-.|...|+.++++.-..+.-|.. ..+.+
T Consensus 337 A~~~a~~~------------------------~~~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~~----------~L~lL 382 (443)
T PF04053_consen 337 ALEIAKEL------------------------DDPEKWKQLGDEALRQGNIELAEECYQKAKDFS----------GLLLL 382 (443)
T ss_dssp HHHHCCCC------------------------STHHHHHHHHHHHHHTTBHHHHHHHHHHCT-HH----------HHHHH
T ss_pred HHHHHHhc------------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHhhcCcc----------ccHHH
Confidence 87775321 011112223334578899999999998876665 46677
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccCC--CCHHHHHHHcCch-hHHHHhhhCCCC
Q 014696 214 AACGGNAQCCQILIAMGASLTAENANG--WTPLMVARSWHRT-GLEDILSTQPEG 265 (420)
Q Consensus 214 Aa~~g~~~iv~~Ll~~gad~~~~d~~G--~TpL~~A~~~g~~-~i~~lL~~~~~~ 265 (420)
....|+.+-++.|.+. -...| ..+++.|...|+. +.+++|.+.+..
T Consensus 383 y~~~g~~~~L~kl~~~------a~~~~~~n~af~~~~~lgd~~~cv~lL~~~~~~ 431 (443)
T PF04053_consen 383 YSSTGDREKLSKLAKI------AEERGDINIAFQAALLLGDVEECVDLLIETGRL 431 (443)
T ss_dssp HHHCT-HHHHHHHHHH------HHHTT-HHHHHHHHHHHT-HHHHHHHHHHTT-H
T ss_pred HHHhCCHHHHHHHHHH------HHHccCHHHHHHHHHHcCCHHHHHHHHHHcCCc
Confidence 8888999888888753 11112 2466666666665 578888877653
No 253
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=24.78 E-value=48 Score=37.13 Aligned_cols=16 Identities=19% Similarity=0.825 Sum_probs=12.8
Q ss_pred CCCCCCCccccccccc
Q 014696 347 SIPCPLCRHGIVSFDK 362 (420)
Q Consensus 347 ~~~CP~CR~~I~~~~~ 362 (420)
...||.|-.+.+...+
T Consensus 709 a~~CP~CGtplv~~~~ 724 (1337)
T PRK14714 709 RVECPRCDVELTPYQR 724 (1337)
T ss_pred cccCCCCCCcccccce
Confidence 5679999988887754
No 254
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=24.62 E-value=66 Score=28.56 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=16.8
Q ss_pred HcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcC
Q 014696 72 ESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYK 107 (420)
Q Consensus 72 ~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 107 (420)
+.|+.-|..|....|+=.+|.+.++.+.-+.|++.|
T Consensus 3 e~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~g 38 (271)
T KOG1709|consen 3 EYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAG 38 (271)
T ss_pred ccCCCccccChhhCCchHHHHHccHHHHHHHHHHcC
Confidence 344444444444444444444444444444444443
No 255
>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....
Probab=24.49 E-value=33 Score=20.22 Aligned_cols=13 Identities=46% Similarity=1.055 Sum_probs=9.3
Q ss_pred CCCCCCCCccccc
Q 014696 346 GSIPCPLCRHGIV 358 (420)
Q Consensus 346 ~~~~CP~CR~~I~ 358 (420)
..+.||.|-..|.
T Consensus 16 ~~irC~~CG~RIl 28 (32)
T PF03604_consen 16 DPIRCPECGHRIL 28 (32)
T ss_dssp STSSBSSSS-SEE
T ss_pred CcEECCcCCCeEE
Confidence 4578999988773
No 256
>PLN02400 cellulose synthase
Probab=24.03 E-value=33 Score=37.71 Aligned_cols=50 Identities=24% Similarity=0.565 Sum_probs=32.6
Q ss_pred CCCcccccCcc-------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 301 PDPCVVCLERK-------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 301 ~d~C~vC~~~~-------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
-.+|.||.|.- ..|++.-||-..|+.|--+ ....|+..||-|+..-.+..
T Consensus 36 gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEY-----------ERkeGnq~CPQCkTrYkR~K 92 (1085)
T PLN02400 36 GQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEY-----------ERKDGTQCCPQCKTRYRRHK 92 (1085)
T ss_pred CceeeecccccCcCCCCCEEEEEccCCCccccchhhe-----------ecccCCccCcccCCcccccc
Confidence 35899999852 3345555666666666521 22346778999998877664
No 257
>KOG4445 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=23.90 E-value=25 Score=32.40 Aligned_cols=58 Identities=22% Similarity=0.414 Sum_probs=31.7
Q ss_pred CCcccccC---ccceEEEeCCCcccchhhHHHHhhcCCCc---c--------cccCCCCCCCCCCCcccccc
Q 014696 302 DPCVVCLE---RKCTVAAKGCDHEFCTQCALYLCSTNSSC---V--------VAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 302 d~C~vC~~---~~~~v~~~~cgH~~C~~C~~~lc~~~~~~---~--------~~~~~~~~~~CP~CR~~I~~ 359 (420)
..|+||+- ..-.+....|-|.+-..|.-.+-..+-.. . ....++--..||+||..|+-
T Consensus 116 gqCvICLygfa~~~~ft~T~C~Hy~H~~ClaRyl~~~~~~lrqe~q~~~~~~qh~~~~~eavcpVcre~i~~ 187 (368)
T KOG4445|consen 116 GQCVICLYGFASSPAFTVTACDHYMHFACLARYLTECLTGLRQEIQDAQKERQHMKEQVEAVCPVCRERIKI 187 (368)
T ss_pred CceEEEEEeecCCCceeeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhHhhhhccc
Confidence 45666664 34445666899997666654432222100 0 01122233459999998864
No 258
>KOG0826 consensus Predicted E3 ubiquitin ligase involved in peroxisome organization [Posttranslational modification, protein turnover, chaperones]
Probab=23.35 E-value=89 Score=29.41 Aligned_cols=49 Identities=22% Similarity=0.468 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCcccccCccceE-EEeCCCcccchhhHHHHhhcCCCcccc
Q 014696 293 NSDSLSTCPDPCVVCLERKCTV-AAKGCDHEFCTQCALYLCSTNSSCVVA 341 (420)
Q Consensus 293 ~~~~~~~~~d~C~vC~~~~~~v-~~~~cgH~~C~~C~~~lc~~~~~~~~~ 341 (420)
+...+..+...|.+|+...-.- +..--|-++|=.|...+-.+-+.|++.
T Consensus 292 e~e~l~~~~~~CpvClk~r~Nptvl~vSGyVfCY~Ci~~Yv~~~~~CPVT 341 (357)
T KOG0826|consen 292 ESELLPPDREVCPVCLKKRQNPTVLEVSGYVFCYPCIFSYVVNYGHCPVT 341 (357)
T ss_pred ccccCCCccccChhHHhccCCCceEEecceEEeHHHHHHHHHhcCCCCcc
Confidence 3344556678899999644332 444569999999998887655554443
No 259
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=23.08 E-value=76 Score=29.90 Aligned_cols=45 Identities=22% Similarity=0.578 Sum_probs=31.1
Q ss_pred CCcccccC----ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 302 DPCVVCLE----RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 302 d~C~vC~~----~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
..|.+|.+ ...++.-.+||+..|..|....|... -.||.||.+..
T Consensus 250 ~s~p~~~~~~~~~d~~~lP~~~~~~~~l~~~~t~~~~~------------~~~~~~rk~~~ 298 (327)
T KOG2068|consen 250 PSCPICYEDLDLTDSNFLPCPCGFRLCLFCHKTISDGD------------GRCPGCRKPYE 298 (327)
T ss_pred CCCCCCCCcccccccccccccccccchhhhhhcccccC------------CCCCccCCccc
Confidence 45777765 33455667899999998886666444 35999994433
No 260
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=22.96 E-value=42 Score=31.48 Aligned_cols=20 Identities=30% Similarity=0.733 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCccccccccc
Q 014696 343 GPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 343 ~~~~~~~CP~CR~~I~~~~~ 362 (420)
.||++..|+.|..+|.+|+-
T Consensus 123 rPpRs~HCsvC~~CV~rfDH 142 (299)
T KOG1311|consen 123 RPPRSSHCSVCNNCVLRFDH 142 (299)
T ss_pred CCCCcccchhhcccccccCC
Confidence 58889999999999999975
No 261
>cd07171 NR_DBD_ER DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers. DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers. Each zinc finger contains a group of four Cys residues which coordinates a single zinc atom. ER interacts with specific DNA sites upstream of the target gene and modulates the rate of transcriptional initiation. Estrogen receptor is a transcription regulator that mediates the biological effects of hormone estrogen. The binding of estrogen to the receptor triggers the dimerization and the binding of the receptor dimer to estrogen response element, which is a palindromic inverted repeat: 5'GGTCAnnnTGACC-3', of target genes. Through ER, estrogen regulates development, reproduction and homeostasis. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, ER has a central well-conserved DNA binding domain (DBD), a variable N-terminal domain, a non-conserv
Probab=22.79 E-value=1.4e+02 Score=21.88 Aligned_cols=28 Identities=18% Similarity=0.417 Sum_probs=15.5
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
...|.||.+....... |=..|..|....
T Consensus 3 ~~~C~VCg~~~~g~hy---Gv~sC~aC~~FF 30 (82)
T cd07171 3 THFCAVCSDYASGYHY---GVWSCEGCKAFF 30 (82)
T ss_pred CCCCeecCCcCcceEE---CceeehhhHHhH
Confidence 3568999874433322 333566666443
No 262
>PF14354 Lar_restr_allev: Restriction alleviation protein Lar
Probab=22.46 E-value=45 Score=22.62 Aligned_cols=15 Identities=33% Similarity=0.744 Sum_probs=9.7
Q ss_pred CCCCCCCcccccccc
Q 014696 347 SIPCPLCRHGIVSFD 361 (420)
Q Consensus 347 ~~~CP~CR~~I~~~~ 361 (420)
..+||||-...+.+.
T Consensus 3 LkPCPFCG~~~~~~~ 17 (61)
T PF14354_consen 3 LKPCPFCGSADVLIR 17 (61)
T ss_pred CcCCCCCCCcceEee
Confidence 467999954544443
No 263
>PLN02195 cellulose synthase A
Probab=22.43 E-value=96 Score=33.94 Aligned_cols=47 Identities=26% Similarity=0.460 Sum_probs=32.2
Q ss_pred CCCcccccC-------ccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 301 PDPCVVCLE-------RKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 301 ~d~C~vC~~-------~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
...|.+|.| ....|++.-||-..|+.|-.+- ...|+..||-|+..-.
T Consensus 6 ~~~c~~cgd~~~~~~~g~~fvaC~eC~~pvCrpCyeye-----------r~eg~q~CpqCkt~Yk 59 (977)
T PLN02195 6 APICATCGEEVGVDSNGEAFVACHECSYPLCKACLEYE-----------IKEGRKVCLRCGGPYD 59 (977)
T ss_pred CccceecccccCcCCCCCeEEEeccCCCccccchhhhh-----------hhcCCccCCccCCccc
Confidence 457999987 2345666678888888877332 1246778999997655
No 264
>KOG4216 consensus Steroid hormone nuclear receptor [Transcription]
Probab=22.18 E-value=29 Score=33.23 Aligned_cols=49 Identities=22% Similarity=0.656 Sum_probs=30.2
Q ss_pred CCCcccccCccceEEEeCCCcccchhhH-----------HHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCA-----------LYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~-----------~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
.=+|.||.|+..-|.. |-..|..|. -|-|...+.|.+.+. .+.+|..||
T Consensus 46 vIPCKiCGDKSSGiHY---GVITCEGCKGFFRRSQ~s~a~YsCpRqknC~iDRt--nRNRCQ~CR 105 (479)
T KOG4216|consen 46 IIPCKICGDKSSGIHY---GVITCEGCKGFFRRSQQSNANYSCPRQKNCLIDRT--NRNRCQHCR 105 (479)
T ss_pred EEeeeeccCCCCccee---eeEeeccchHhhhhhhhccccccCCcccCCccccc--ccchhhHHH
Confidence 4469999998876622 333444442 234555555555554 567899998
No 265
>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=22.09 E-value=65 Score=19.19 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=11.4
Q ss_pred CCCCCCccccccccc
Q 014696 348 IPCPLCRHGIVSFDK 362 (420)
Q Consensus 348 ~~CP~CR~~I~~~~~ 362 (420)
..||+|.++-..|.+
T Consensus 19 ~~CP~Cg~~~~~F~~ 33 (34)
T cd00729 19 EKCPICGAPKEKFEE 33 (34)
T ss_pred CcCcCCCCchHHcEE
Confidence 469999988776654
No 266
>COG1645 Uncharacterized Zn-finger containing protein [General function prediction only]
Probab=21.66 E-value=19 Score=29.04 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=8.7
Q ss_pred CCCCCCCCCcc
Q 014696 345 IGSIPCPLCRH 355 (420)
Q Consensus 345 ~~~~~CP~CR~ 355 (420)
.|.+.||+|-.
T Consensus 42 dG~v~CPvC~~ 52 (131)
T COG1645 42 DGEVFCPVCGY 52 (131)
T ss_pred CCeEECCCCCc
Confidence 36788999985
No 267
>PRK00418 DNA gyrase inhibitor; Reviewed
Probab=21.46 E-value=55 Score=22.66 Aligned_cols=12 Identities=25% Similarity=0.822 Sum_probs=9.0
Q ss_pred CCCCCCCCcccc
Q 014696 346 GSIPCPLCRHGI 357 (420)
Q Consensus 346 ~~~~CP~CR~~I 357 (420)
..+.||.|+..+
T Consensus 5 ~~v~CP~C~k~~ 16 (62)
T PRK00418 5 ITVNCPTCGKPV 16 (62)
T ss_pred ccccCCCCCCcc
Confidence 456799999654
No 268
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=21.34 E-value=77 Score=24.14 Aligned_cols=28 Identities=21% Similarity=0.453 Sum_probs=20.8
Q ss_pred CCCcccccCcc--ceEEEeCCCcccchhhH
Q 014696 301 PDPCVVCLERK--CTVAAKGCDHEFCTQCA 328 (420)
Q Consensus 301 ~d~C~vC~~~~--~~v~~~~cgH~~C~~C~ 328 (420)
...|.+|.... ..++..||||.+...|.
T Consensus 78 ~~~C~vC~k~l~~~~f~~~p~~~v~H~~C~ 107 (109)
T PF10367_consen 78 STKCSVCGKPLGNSVFVVFPCGHVVHYSCI 107 (109)
T ss_pred CCCccCcCCcCCCceEEEeCCCeEEecccc
Confidence 45699998643 35577799999888875
No 269
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=21.32 E-value=1.1e+02 Score=21.29 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=17.2
Q ss_pred HHHHHHHcCCHHHHHHHHHhC
Q 014696 19 RLVSAARDGDLQEAKALLEYN 39 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~ 39 (420)
++..+|..||.+.+..++++.
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y 22 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHY 22 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 367788999999998888875
No 270
>PF06755 DUF1219: Protein of unknown function (DUF1219); InterPro: IPR009610 This family consists of several hypothetical proteins which seem to be specific to the enterobacteria Escherichia coli and Shigella flexneri. Family members are often known as YeeV proteins and are around 125 residues in length. The function of this family is unknown.
Probab=20.94 E-value=2.6e+02 Score=21.77 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=13.1
Q ss_pred ccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 208 STSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 208 ~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
.||++ ...+|+..++.|+.+
T Consensus 40 DT~f~------de~vI~~hidaGIs~ 59 (114)
T PF06755_consen 40 DTPFS------DETVIQEHIDAGISP 59 (114)
T ss_pred CCccc------hHHHHHHHHHhCCCH
Confidence 46665 456777777776654
No 271
>PF00643 zf-B_box: B-box zinc finger; InterPro: IPR000315 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents B-box-type zinc finger domains, which are around 40 residues in length. B-box zinc fingers can be divided into two groups, where types 1 and 2 B-box domains differ in their consensus sequence and in the spacing of the 7-8 zinc-binding residues. Several proteins contain both types 1 and 2 B-boxes, suggesting some level of cooperativity between these two domains. B-box domains are found in over 1500 proteins from a variety of organisms. They are found in TRIM (tripartite motif) proteins that consist of an N-terminal RING finger (originally called an A-box), followed by 1-2 B-box domains and a coiled-coil domain (also called RBCC for Ring, B-box, Coiled-Coil). TRIM proteins contain a type 2 B-box domain, and may also contain a type 1 B-box. In proteins that do not contain RING or coiled-coil domains, the B-box domain is primarily type 2. Many type 2 B-box proteins are involved in ubiquitinylation. Proteins containing a B-box zinc finger domain include transcription factors, ribonucleoproteins and proto-oncoproteins; for example, MID1, MID2, TRIM9, TNL, TRIM36, TRIM63, TRIFIC, NCL1 and CONSTANS-like proteins []. The microtubule-associated E3 ligase MID1 (6.3.2 from EC) contains a type 1 B-box zinc finger domain. MID1 specifically binds Alpha-4, which in turn recruits the catalytic subunit of phosphatase 2A (PP2Ac). This complex is required for targeting of PP2Ac for proteasome-mediated degradation. The MID1 B-box coordinates two zinc ions and adopts a beta/beta/alpha cross-brace structure similar to that of ZZ, PHD, RING and FYVE zinc fingers [, ]. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 3DDT_B 2D8U_A 3Q1D_A 2EGM_A 2YVR_B 2DJA_A 2DQ5_A 2JUN_A 2YRG_A 2DID_A ....
Probab=20.94 E-value=1e+02 Score=18.85 Aligned_cols=30 Identities=17% Similarity=0.549 Sum_probs=24.3
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHH
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALY 330 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~ 330 (420)
...|..+.+....++...|+-..|..|...
T Consensus 3 ~~~C~~H~~~~~~~~C~~C~~~~C~~C~~~ 32 (42)
T PF00643_consen 3 EPKCPEHPEEPLSLFCEDCNEPLCSECTVS 32 (42)
T ss_dssp SSB-SSTTTSBEEEEETTTTEEEEHHHHHT
T ss_pred CccCccCCccceEEEecCCCCccCccCCCC
Confidence 356888888878899999999999999854
No 272
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=20.64 E-value=92 Score=34.36 Aligned_cols=50 Identities=26% Similarity=0.553 Sum_probs=33.5
Q ss_pred CCCcccccCc-------cceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 301 PDPCVVCLER-------KCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 301 ~d~C~vC~~~-------~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
..+|.+|.|. ...|++.-||-..|+.|--+- ...++..||-|+..-.+..
T Consensus 15 ~~~c~iCGd~vg~~~~Ge~FVAC~eC~fpvCr~cyeye-----------~~~g~~~cp~c~t~y~~~~ 71 (1044)
T PLN02915 15 AKTCRVCGDEVGVKEDGQPFVACHVCGFPVCKPCYEYE-----------RSEGNQCCPQCNTRYKRHK 71 (1044)
T ss_pred cchhhccccccCcCCCCCEEEEeccCCCccccchhhhh-----------hhcCCccCCccCCchhhhc
Confidence 4679999874 234566667777777776222 1246778999998877654
No 273
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=20.50 E-value=73 Score=27.72 Aligned_cols=45 Identities=27% Similarity=0.349 Sum_probs=32.3
Q ss_pred CCCCHHHHHHHcCcHHHHH-HHHHcCCC----CCccccCCCChHHHHHHHc
Q 014696 83 RGQTALMQACQHGHWEVVL-TLILYKAN----IHRADYLNGGTALHLAALN 128 (420)
Q Consensus 83 ~g~TpL~~A~~~g~~~iv~-~Ll~~ga~----~~~~~~~~g~tpL~~A~~~ 128 (420)
+...|||-|+.-++.+++- ++++..+. .|..|. +|..+|.+|..+
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~-nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADH-NGALALDIALCR 270 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccccccccccccCC-CchHHHHHHHHH
Confidence 3467999999999988764 55665443 344554 899999998765
No 274
>PF04840 Vps16_C: Vps16, C-terminal region; InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=20.44 E-value=1.2e+02 Score=28.81 Aligned_cols=51 Identities=24% Similarity=0.384 Sum_probs=39.3
Q ss_pred HHHHHcCCHHHHHHHHHhCCCcccc----cCCCCCCcHHHHHHHcCcHHHHHHHH
Q 014696 21 VSAARDGDLQEAKALLEYNPRLVRY----STFGVRNSPLHYSAAQGHHEIVSLLI 71 (420)
Q Consensus 21 ~~Aa~~g~~~~v~~Ll~~~~~~~~~----~~~~~g~t~Lh~Aa~~g~~~iv~~Ll 71 (420)
..|...|..+.+..|++..+....+ -..+....+|.-|+..|+.++|-.++
T Consensus 8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vL 62 (319)
T PF04840_consen 8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVL 62 (319)
T ss_pred HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHH
Confidence 5688899999999999998775422 22333468999999999999887665
No 275
>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.
Probab=20.38 E-value=45 Score=21.95 Aligned_cols=16 Identities=38% Similarity=0.879 Sum_probs=12.6
Q ss_pred CCCCCCcccccccccc
Q 014696 348 IPCPLCRHGIVSFDKL 363 (420)
Q Consensus 348 ~~CP~CR~~I~~~~~~ 363 (420)
=.||.|...=.+|.++
T Consensus 35 w~CP~C~a~K~~F~~~ 50 (50)
T cd00730 35 WVCPVCGAGKDDFEPL 50 (50)
T ss_pred CCCCCCCCcHHHcEeC
Confidence 4699999888887654
No 276
>PLN03077 Protein ECB2; Provisional
Probab=20.33 E-value=1.1e+03 Score=25.60 Aligned_cols=51 Identities=20% Similarity=0.177 Sum_probs=23.1
Q ss_pred hhHHHHH-HhcCCHHHH----HHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHH
Q 014696 172 LEVLLHL-TLNGHVESV----QLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILI 227 (420)
Q Consensus 172 ~~~~l~a-a~~g~~~~v----~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll 227 (420)
..+++.+ +..|..+-+ +.+.+.|..++.. .-.+.|...+..|..+....++
T Consensus 357 ~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd~~-----t~~~ll~a~~~~g~~~~a~~l~ 412 (857)
T PLN03077 357 WTAMISGYEKNGLPDKALETYALMEQDNVSPDEI-----TIASVLSACACLGDLDVGVKLH 412 (857)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCce-----eHHHHHHHHhccchHHHHHHHH
Confidence 3344444 666664432 2333345544421 1233444445556665444444
No 277
>PRK09710 lar restriction alleviation and modification protein; Reviewed
Probab=20.27 E-value=58 Score=22.65 Aligned_cols=16 Identities=31% Similarity=0.760 Sum_probs=13.4
Q ss_pred CCCCCCCccccccccc
Q 014696 347 SIPCPLCRHGIVSFDK 362 (420)
Q Consensus 347 ~~~CP~CR~~I~~~~~ 362 (420)
..+||+|-..++.+..
T Consensus 6 lKPCPFCG~~~~~v~~ 21 (64)
T PRK09710 6 VKPCPFCGCPSVTVKA 21 (64)
T ss_pred ccCCCCCCCceeEEEe
Confidence 4679999999998864
Done!