Query 014696
Match_columns 420
No_of_seqs 447 out of 2254
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 16:11:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aji_A 26S proteasome non-ATPa 100.0 2.3E-39 7.9E-44 292.5 22.1 225 15-264 5-229 (231)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-39 8.1E-44 297.1 21.2 227 13-265 7-248 (253)
3 3utm_A Tankyrase-1; tankyrase, 100.0 4.1E-38 1.4E-42 301.5 28.4 258 16-281 24-319 (351)
4 1wdy_A 2-5A-dependent ribonucl 100.0 1.1E-37 3.8E-42 289.6 29.6 249 16-281 5-259 (285)
5 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-38 9.9E-43 295.2 24.3 239 15-281 14-261 (285)
6 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-38 3.8E-43 289.6 20.8 226 14-264 7-240 (241)
7 2xai_A ASB-9, ankyrin repeat a 100.0 2.2E-38 7.4E-43 292.1 22.7 220 15-265 2-222 (261)
8 3b7b_A Euchromatic histone-lys 100.0 7.4E-38 2.5E-42 283.7 24.7 222 12-260 7-230 (237)
9 1wdy_A 2-5A-dependent ribonucl 100.0 1.3E-37 4.3E-42 289.2 26.0 226 15-265 38-278 (285)
10 3d9h_A CDNA FLJ77766, highly s 100.0 7.9E-38 2.7E-42 292.2 23.9 222 13-265 56-278 (285)
11 1n11_A Ankyrin; clathrin, BAND 100.0 1.6E-37 5.3E-42 307.5 27.3 226 14-265 111-336 (437)
12 1n11_A Ankyrin; clathrin, BAND 100.0 4.1E-37 1.4E-41 304.4 28.1 261 14-282 12-285 (437)
13 1oy3_D Transcription factor in 100.0 1.2E-37 4E-42 289.5 22.6 244 14-282 7-265 (282)
14 4b93_B Ankyrin repeat domain-c 100.0 1.1E-38 3.8E-43 295.3 15.3 217 16-259 11-235 (269)
15 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-37 4E-42 302.3 21.6 232 15-265 124-371 (373)
16 3ljn_A Hypothetical protein; a 100.0 2.2E-37 7.4E-42 299.2 22.2 223 15-265 19-269 (364)
17 2f8y_A Notch homolog 1, transl 100.0 4.2E-37 1.4E-41 276.1 20.5 215 27-267 2-218 (223)
18 4g8k_A 2-5A-dependent ribonucl 100.0 1.1E-36 3.8E-41 291.1 23.9 293 16-331 25-323 (337)
19 2dzn_A Probable 26S proteasome 100.0 7.4E-37 2.5E-41 275.4 21.1 218 16-262 2-227 (228)
20 1s70_B 130 kDa myosin-binding 100.0 3.2E-37 1.1E-41 289.5 18.1 242 15-262 39-287 (299)
21 1oy3_D Transcription factor in 100.0 1E-36 3.5E-41 283.1 21.2 234 47-293 5-251 (282)
22 3eu9_A Huntingtin-interacting 100.0 3E-36 1E-40 272.9 22.9 223 16-265 9-235 (240)
23 2xai_A ASB-9, ankyrin repeat a 100.0 3.7E-36 1.3E-40 277.2 23.0 203 51-281 3-205 (261)
24 3b7b_A Euchromatic histone-lys 100.0 1.8E-35 6.2E-40 268.0 24.6 212 44-281 4-216 (237)
25 3kea_A K1L; tropism, ANK repea 100.0 6.9E-37 2.4E-41 285.8 15.6 216 14-265 29-246 (285)
26 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-35 6.4E-40 283.0 25.7 222 14-265 56-334 (351)
27 1yyh_A HN1;, notch 1, ankyrin 100.0 6.9E-36 2.4E-40 274.0 19.3 221 47-297 6-241 (253)
28 4g8k_A 2-5A-dependent ribonucl 100.0 3.5E-35 1.2E-39 280.6 23.5 239 2-265 42-298 (337)
29 2fo1_E LIN-12 protein; beta-ba 100.0 3.3E-36 1.1E-40 292.0 16.5 254 14-296 92-363 (373)
30 1k1a_A B-cell lymphoma 3-encod 100.0 5.9E-35 2E-39 265.0 23.6 212 47-281 5-222 (241)
31 3hra_A Ankyrin repeat family p 100.0 9.9E-35 3.4E-39 256.3 23.6 190 15-263 4-201 (201)
32 2rfa_A Transient receptor pote 100.0 3.3E-35 1.1E-39 265.5 20.8 204 51-266 3-223 (232)
33 1ikn_D Protein (I-kappa-B-alph 100.0 2.7E-36 9.4E-41 273.5 12.5 209 51-278 8-222 (236)
34 4gpm_A Engineered protein OR26 100.0 6.8E-35 2.3E-39 250.4 20.0 154 54-264 7-160 (169)
35 3kea_A K1L; tropism, ANK repea 100.0 4.4E-35 1.5E-39 273.6 20.0 238 23-292 6-246 (285)
36 3ljn_A Hypothetical protein; a 100.0 2.8E-35 9.5E-40 284.4 19.1 232 43-282 12-251 (364)
37 4gpm_A Engineered protein OR26 100.0 1.3E-34 4.4E-39 248.7 20.1 160 17-235 5-164 (169)
38 2dzn_A Probable 26S proteasome 100.0 4.4E-34 1.5E-38 257.1 20.5 207 51-282 2-215 (228)
39 1s70_B 130 kDa myosin-binding 100.0 3.4E-34 1.1E-38 268.8 19.9 236 21-280 3-270 (299)
40 2etb_A Transient receptor pote 100.0 1E-34 3.4E-39 266.5 15.3 198 16-266 2-247 (256)
41 3aji_A 26S proteasome non-ATPa 100.0 2.8E-33 9.7E-38 252.5 23.0 207 50-282 5-212 (231)
42 2pnn_A Transient receptor pote 100.0 1.3E-34 4.5E-39 268.4 14.1 203 14-269 11-262 (273)
43 4b93_B Ankyrin repeat domain-c 100.0 2.4E-34 8.1E-39 266.2 14.6 207 50-282 10-225 (269)
44 3jxi_A Vanilloid receptor-rela 100.0 1.4E-34 4.6E-39 266.2 12.1 199 16-267 5-252 (260)
45 2f8y_A Notch homolog 1, transl 100.0 2.7E-32 9.3E-37 244.7 23.9 206 2-234 8-218 (223)
46 4hbd_A KN motif and ankyrin re 100.0 4.3E-33 1.5E-37 258.9 14.1 190 19-265 79-275 (276)
47 3eu9_A Huntingtin-interacting 100.0 7.5E-32 2.6E-36 243.9 21.4 217 49-294 7-225 (240)
48 3v31_A Ankyrin repeat family A 100.0 1.1E-31 3.7E-36 229.9 18.6 159 50-265 2-160 (167)
49 2rfm_A Putative ankyrin repeat 100.0 4E-32 1.4E-36 238.2 15.7 160 47-263 31-190 (192)
50 2rfa_A Transient receptor pote 100.0 3.3E-31 1.1E-35 239.2 22.0 190 83-293 2-211 (232)
51 2y1l_E Darpin-8.4; hydrolase-i 100.0 3E-31 1E-35 227.8 19.9 157 50-263 13-169 (169)
52 1sw6_A Regulatory protein SWI6 100.0 2.1E-32 7.2E-37 260.5 11.5 220 19-251 100-327 (327)
53 3v30_A DNA-binding protein rfx 100.0 2.4E-31 8.3E-36 228.8 16.5 169 17-243 3-171 (172)
54 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.8E-31 1.3E-35 225.1 17.0 155 52-264 6-161 (162)
55 3v30_A DNA-binding protein rfx 100.0 5E-31 1.7E-35 226.9 16.0 157 52-265 3-160 (172)
56 1awc_B Protein (GA binding pro 100.0 2E-30 7E-35 218.8 18.3 151 52-260 3-153 (153)
57 1sw6_A Regulatory protein SWI6 100.0 3E-31 1E-35 252.5 13.0 222 27-282 58-323 (327)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.2E-30 1.1E-34 219.4 17.2 157 16-232 5-162 (162)
59 3hra_A Ankyrin repeat family p 100.0 2.5E-29 8.4E-34 221.6 22.8 183 50-294 4-193 (201)
60 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-30 4.4E-35 236.1 14.9 197 78-297 2-214 (236)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.7E-29 5.8E-34 216.8 20.3 158 14-230 12-169 (169)
62 3v31_A Ankyrin repeat family A 100.0 7.8E-30 2.7E-34 218.3 17.9 161 15-234 2-162 (167)
63 3twr_A Tankyrase-2; ankyrin re 100.0 2E-30 6.8E-35 221.6 13.7 156 51-264 8-164 (165)
64 2pnn_A Transient receptor pote 100.0 3E-30 1E-34 239.0 15.7 185 14-245 52-272 (273)
65 2etb_A Transient receptor pote 100.0 2.4E-30 8.3E-35 237.2 14.1 188 50-294 1-236 (256)
66 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1E-29 3.4E-34 215.0 16.6 152 52-262 3-155 (156)
67 1awc_B Protein (GA binding pro 100.0 3.2E-29 1.1E-33 211.4 19.1 150 17-226 3-152 (153)
68 3f6q_A Integrin-linked protein 100.0 1.1E-29 3.8E-34 220.0 16.6 113 18-133 7-120 (179)
69 3f6q_A Integrin-linked protein 100.0 1.2E-29 3.9E-34 219.9 16.5 160 51-267 5-165 (179)
70 3twr_A Tankyrase-2; ankyrin re 100.0 7.7E-30 2.6E-34 217.9 14.9 161 12-231 4-164 (165)
71 2rfm_A Putative ankyrin repeat 100.0 3.8E-29 1.3E-33 219.2 18.0 159 13-230 32-190 (192)
72 2vge_A RELA-associated inhibit 100.0 3.1E-32 1.1E-36 245.9 -2.6 182 18-260 23-208 (229)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 9.7E-29 3.3E-33 208.9 17.8 154 16-229 2-155 (156)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 4.4E-30 1.5E-34 233.4 6.7 187 15-263 4-202 (239)
75 3jxi_A Vanilloid receptor-rela 100.0 3.4E-29 1.2E-33 230.0 12.5 173 15-234 45-252 (260)
76 2vge_A RELA-associated inhibit 100.0 1.2E-29 4.2E-34 228.9 4.6 189 32-280 1-193 (229)
77 2aja_A Ankyrin repeat family p 100.0 1.7E-30 5.7E-35 250.8 -2.2 237 16-297 92-367 (376)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-28 3.8E-33 224.1 9.9 158 50-265 4-164 (239)
79 4hbd_A KN motif and ankyrin re 99.9 4.4E-27 1.5E-31 218.3 18.0 161 12-230 107-273 (276)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 5.4E-28 1.9E-32 204.6 10.8 142 48-247 9-151 (156)
81 3t8k_A Uncharacterized protein 99.9 2.8E-28 9.5E-33 212.6 9.0 157 53-262 8-176 (186)
82 3t8k_A Uncharacterized protein 99.9 1.1E-27 3.6E-32 208.9 9.9 165 18-237 8-184 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 3.4E-27 1.2E-31 194.9 12.1 87 50-138 11-98 (136)
84 1d9s_A Cyclin-dependent kinase 99.9 8E-27 2.7E-31 192.7 13.3 133 74-264 2-135 (136)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.9E-25 6.4E-30 181.1 16.6 125 51-232 2-126 (126)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-25 4.8E-30 185.2 14.5 87 51-138 14-100 (136)
87 2aja_A Ankyrin repeat family p 99.9 1.1E-27 3.7E-32 231.1 -1.2 228 16-262 128-371 (376)
88 3c5r_A BARD-1, BRCA1-associate 99.9 6.8E-26 2.3E-30 187.2 9.5 133 74-264 1-133 (137)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-25 6.7E-30 188.8 11.1 143 77-279 5-148 (156)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-24 5.2E-29 178.9 16.0 123 15-140 13-135 (136)
91 3deo_A Signal recognition part 99.9 7.1E-25 2.4E-29 190.5 12.2 139 50-262 43-181 (183)
92 2b0o_E UPLC1; arfgap, structur 99.9 8.2E-25 2.8E-29 205.3 13.1 138 53-253 153-299 (301)
93 3ui2_A Signal recognition part 99.9 1.1E-24 3.9E-29 198.3 12.1 87 51-138 45-131 (244)
94 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-23 3.6E-28 170.6 16.4 124 16-142 2-125 (126)
95 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-24 6.5E-29 178.5 9.0 128 47-231 6-133 (137)
96 3ehr_A Osteoclast-stimulating 99.9 2.4E-24 8E-29 193.1 9.8 134 51-241 73-207 (222)
97 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-23 4.2E-28 197.3 12.9 124 16-140 151-281 (301)
98 3ui2_A Signal recognition part 99.9 2.6E-23 8.7E-28 189.3 13.6 142 15-233 44-186 (244)
99 3aaa_C Myotrophin, protein V-1 99.9 1.4E-23 4.8E-28 169.9 10.2 46 203-248 69-114 (123)
100 3deo_A Signal recognition part 99.9 8.2E-23 2.8E-27 177.4 14.6 110 15-128 43-153 (183)
101 3aaa_C Myotrophin, protein V-1 99.9 2.8E-23 9.6E-28 168.1 10.6 116 14-132 5-120 (123)
102 3ehr_A Osteoclast-stimulating 99.9 1.1E-23 3.7E-28 188.7 7.9 131 80-267 69-200 (222)
103 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-22 5E-27 203.3 16.6 136 52-250 133-277 (497)
104 1dcq_A PYK2-associated protein 99.9 5.9E-22 2E-26 183.7 16.8 126 18-144 132-264 (278)
105 3jue_A Arfgap with coiled-coil 99.9 5.4E-22 1.8E-26 190.6 14.6 142 52-250 200-347 (368)
106 3lvq_E ARF-GAP with SH3 domain 99.9 8.5E-22 2.9E-26 197.8 15.7 127 16-143 132-265 (497)
107 3jue_A Arfgap with coiled-coil 99.9 7.5E-22 2.6E-26 189.6 14.6 125 16-141 199-324 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1E-21 3.5E-26 150.7 12.5 91 51-142 2-92 (93)
109 1dcq_A PYK2-associated protein 99.9 1.3E-21 4.6E-26 181.3 15.2 194 15-267 65-265 (278)
110 2l6b_A NR1C; ankyrin, consensu 99.8 7.7E-21 2.6E-25 151.7 8.4 108 80-244 5-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.4E-20 2.5E-24 140.2 12.0 92 16-109 2-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 5.3E-20 1.8E-24 146.8 7.7 109 10-121 3-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 9.3E-19 3.2E-23 138.5 10.4 89 48-137 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 9.7E-17 3.3E-21 126.8 10.8 88 14-103 22-109 (110)
115 2ea5_A Cell growth regulator w 98.8 3.8E-09 1.3E-13 74.7 3.8 55 294-364 8-63 (68)
116 2vje_A E3 ubiquitin-protein li 98.7 9.5E-09 3.3E-13 71.8 3.3 52 300-363 7-61 (64)
117 2vje_B MDM4 protein; proto-onc 98.6 1.9E-08 6.5E-13 70.0 3.5 51 301-363 7-60 (63)
118 2yho_A E3 ubiquitin-protein li 98.5 1E-07 3.4E-12 69.5 5.1 46 302-363 19-65 (79)
119 4ic3_A E3 ubiquitin-protein li 98.4 3.7E-07 1.3E-11 65.7 4.6 46 302-363 25-71 (74)
120 2ep4_A Ring finger protein 24; 98.3 1.3E-06 4.4E-11 62.8 6.5 55 299-365 13-70 (74)
121 2ecg_A Baculoviral IAP repeat- 98.3 2.1E-07 7.2E-12 67.2 2.0 46 302-363 26-72 (75)
122 2ysl_A Tripartite motif-contai 98.2 2E-06 6.9E-11 61.6 6.2 52 299-359 18-69 (73)
123 1chc_A Equine herpes virus-1 r 98.2 1.7E-06 5.7E-11 61.1 5.1 54 299-364 3-57 (68)
124 2d8t_A Dactylidin, ring finger 98.2 2.1E-06 7.3E-11 61.1 5.0 50 299-360 13-62 (71)
125 2ea6_A Ring finger protein 4; 98.1 2.1E-06 7E-11 60.7 4.5 50 298-359 12-68 (69)
126 2ecm_A Ring finger and CHY zin 98.1 3.2E-06 1.1E-10 56.7 4.5 47 300-358 4-54 (55)
127 2ecn_A Ring finger protein 141 98.1 1.7E-06 6E-11 61.4 3.1 51 299-362 13-63 (70)
128 2egp_A Tripartite motif-contai 98.0 7.3E-06 2.5E-10 59.6 6.0 57 298-359 9-65 (79)
129 2kiz_A E3 ubiquitin-protein li 98.0 7.8E-06 2.7E-10 57.7 5.9 50 299-360 12-64 (69)
130 4ayc_A E3 ubiquitin-protein li 98.0 3.1E-06 1.1E-10 68.9 4.3 47 302-360 54-100 (138)
131 2djb_A Polycomb group ring fin 98.0 6.6E-06 2.2E-10 58.7 5.4 50 300-361 14-64 (72)
132 2ct2_A Tripartite motif protei 98.0 6.6E-06 2.3E-10 61.2 5.6 52 299-359 13-68 (88)
133 2csy_A Zinc finger protein 183 98.0 7.2E-06 2.5E-10 60.0 5.6 47 300-358 14-60 (81)
134 1iym_A EL5; ring-H2 finger, ub 98.0 4.7E-06 1.6E-10 55.9 4.1 47 300-358 4-54 (55)
135 2yur_A Retinoblastoma-binding 98.0 5.8E-06 2E-10 59.3 4.6 52 300-361 14-66 (74)
136 2ecy_A TNF receptor-associated 98.0 5.3E-06 1.8E-10 58.0 4.1 50 299-359 13-62 (66)
137 2ect_A Ring finger protein 126 98.0 1.3E-05 4.3E-10 58.2 6.2 53 299-363 13-68 (78)
138 2ecw_A Tripartite motif-contai 98.0 1.3E-05 4.4E-10 59.1 6.0 54 300-359 18-71 (85)
139 2l0b_A E3 ubiquitin-protein li 98.0 7.5E-06 2.6E-10 61.3 4.7 49 299-359 38-89 (91)
140 3ng2_A RNF4, snurf, ring finge 97.9 4.7E-06 1.6E-10 59.2 3.2 49 299-359 8-63 (71)
141 1e4u_A Transcriptional repress 97.9 1.2E-05 4.1E-10 58.1 5.3 51 299-360 9-63 (78)
142 3fl2_A E3 ubiquitin-protein li 97.9 6.4E-06 2.2E-10 65.7 3.6 48 302-360 53-100 (124)
143 2xeu_A Ring finger protein 4; 97.9 6.3E-06 2.2E-10 57.2 3.1 47 301-359 3-56 (64)
144 2ecv_A Tripartite motif-contai 97.9 1.6E-05 5.5E-10 58.5 5.4 55 299-359 17-71 (85)
145 1x4j_A Ring finger protein 38; 97.9 1.3E-05 4.6E-10 57.5 4.8 49 299-359 21-72 (75)
146 3ztg_A E3 ubiquitin-protein li 97.9 6.2E-06 2.1E-10 61.9 3.0 54 300-363 12-66 (92)
147 1g25_A CDK-activating kinase a 97.9 1.9E-05 6.5E-10 55.0 5.3 48 301-359 3-55 (65)
148 3t6p_A Baculoviral IAP repeat- 97.8 8E-06 2.7E-10 76.5 3.3 48 301-364 295-343 (345)
149 1jm7_A BRCA1, breast cancer ty 97.8 1.1E-05 3.9E-10 62.9 3.6 49 302-359 22-70 (112)
150 1bor_A Transcription factor PM 97.8 1E-05 3.6E-10 54.5 2.8 43 301-358 6-48 (56)
151 2y1n_A E3 ubiquitin-protein li 97.8 2.2E-05 7.4E-10 74.1 5.4 51 302-363 333-383 (389)
152 1z6u_A NP95-like ring finger p 97.8 1.4E-05 4.8E-10 65.8 3.5 51 302-363 79-129 (150)
153 3lrq_A E3 ubiquitin-protein li 97.7 2E-05 7E-10 60.1 3.8 46 302-358 23-69 (100)
154 2ysj_A Tripartite motif-contai 97.7 4.8E-05 1.7E-09 52.5 5.1 47 298-353 17-63 (63)
155 2y43_A E3 ubiquitin-protein li 97.7 3.2E-05 1.1E-09 58.8 4.4 46 302-359 23-69 (99)
156 3l11_A E3 ubiquitin-protein li 97.6 3.1E-05 1.1E-09 60.7 3.8 48 302-360 16-63 (115)
157 1t1h_A Gspef-atpub14, armadill 97.6 7.1E-05 2.4E-09 54.1 5.4 49 301-360 8-56 (78)
158 2ecj_A Tripartite motif-contai 97.6 7E-05 2.4E-09 50.6 5.0 47 298-353 12-58 (58)
159 2ckl_B Ubiquitin ligase protei 97.6 2.3E-05 8E-10 65.7 3.1 52 302-364 55-107 (165)
160 2ckl_A Polycomb group ring fin 97.6 5.5E-05 1.9E-09 58.6 4.5 48 301-360 15-63 (108)
161 2ecl_A Ring-box protein 2; RNF 97.6 8.1E-05 2.8E-09 54.3 4.9 47 300-358 14-75 (81)
162 1v87_A Deltex protein 2; ring- 97.5 7.2E-05 2.5E-09 58.5 3.8 53 301-360 25-95 (114)
163 3hct_A TNF receptor-associated 97.4 0.00011 3.8E-09 57.8 3.9 50 300-360 17-66 (118)
164 1rmd_A RAG1; V(D)J recombinati 97.4 0.00014 4.7E-09 57.0 4.1 48 302-360 24-71 (116)
165 4ap4_A E3 ubiquitin ligase RNF 97.3 0.00015 5.1E-09 58.2 3.6 49 300-360 6-61 (133)
166 3dpl_R Ring-box protein 1; ubi 97.3 0.0003 1E-08 53.9 5.1 46 300-357 36-99 (106)
167 1wim_A KIAA0161 protein; ring 97.2 0.00012 4.3E-09 54.9 2.0 52 301-356 5-61 (94)
168 1jm7_B BARD1, BRCA1-associated 97.2 9.4E-05 3.2E-09 58.1 1.2 43 302-358 23-66 (117)
169 3knv_A TNF receptor-associated 97.0 0.00014 4.9E-09 59.0 1.2 48 299-357 29-76 (141)
170 4ap4_A E3 ubiquitin ligase RNF 96.9 0.00051 1.8E-08 55.0 3.4 49 299-359 70-125 (133)
171 2d8s_A Cellular modulator of i 96.9 0.0018 6.1E-08 46.8 5.5 58 297-365 11-76 (80)
172 3hcs_A TNF receptor-associated 96.6 0.0012 4.1E-08 55.4 3.4 49 301-360 18-66 (170)
173 4a0k_B E3 ubiquitin-protein li 96.5 0.00048 1.6E-08 53.6 0.3 47 299-357 46-110 (117)
174 2c2l_A CHIP, carboxy terminus 96.5 0.005 1.7E-07 56.0 7.1 49 301-360 208-256 (281)
175 2kr4_A Ubiquitin conjugation f 96.5 0.0044 1.5E-07 45.3 5.3 47 301-359 14-60 (85)
176 2kre_A Ubiquitin conjugation f 96.4 0.005 1.7E-07 46.5 5.5 47 301-359 29-75 (100)
177 3vk6_A E3 ubiquitin-protein li 96.3 0.0048 1.6E-07 45.6 4.5 39 315-364 16-54 (101)
178 1wgm_A Ubiquitin conjugation f 96.1 0.0084 2.9E-07 45.1 5.2 47 301-359 22-69 (98)
179 3htk_C E3 SUMO-protein ligase 95.7 0.0058 2E-07 54.1 3.3 49 301-359 181-232 (267)
180 2f42_A STIP1 homology and U-bo 95.4 0.012 4.2E-07 49.3 4.0 49 301-360 106-154 (179)
181 2ct0_A Non-SMC element 1 homol 94.7 0.05 1.7E-06 38.3 4.9 56 293-358 7-63 (74)
182 2yu4_A E3 SUMO-protein ligase 94.6 0.048 1.7E-06 40.5 5.0 50 301-356 7-59 (94)
183 3k1l_B Fancl; UBC, ring, RWD, 92.3 0.073 2.5E-06 48.9 3.0 58 300-358 307-372 (381)
184 2ko5_A Ring finger protein Z; 90.1 0.36 1.2E-05 35.0 4.2 55 298-365 25-79 (99)
185 1vyx_A ORF K3, K3RING; zinc-bi 89.1 0.22 7.4E-06 33.4 2.4 48 300-357 5-57 (60)
186 2bay_A PRE-mRNA splicing facto 84.3 0.79 2.7E-05 30.7 3.1 46 303-360 5-51 (61)
187 2d8v_A Zinc finger FYVE domain 79.4 1.6 5.4E-05 29.4 3.0 32 300-332 7-39 (67)
188 2lri_C Autoimmune regulator; Z 74.9 8.1 0.00028 26.1 5.7 49 300-356 11-59 (66)
189 2a20_A Regulating synaptic mem 63.4 0.13 4.5E-06 33.6 -4.9 34 298-335 6-39 (62)
190 4ayb_P DNA-directed RNA polyme 61.1 4.9 0.00017 24.9 2.0 25 347-371 23-47 (48)
191 1weo_A Cellulose synthase, cat 58.9 11 0.00039 26.9 3.8 53 301-364 16-75 (93)
192 3mkq_B Coatomer subunit alpha; 52.3 28 0.00095 28.7 5.9 110 15-141 7-141 (177)
193 3o36_A Transcription intermedi 51.6 12 0.0004 31.2 3.6 50 300-357 3-52 (184)
194 3u5n_A E3 ubiquitin-protein li 47.0 16 0.00054 31.0 3.8 50 300-357 6-55 (207)
195 2jun_A Midline-1; B-BOX, TRIM, 46.5 13 0.00044 27.3 2.8 30 302-331 4-36 (101)
196 3zrh_A Ubiquitin thioesterase 44.3 51 0.0017 30.9 6.8 22 23-44 29-50 (454)
197 2l5u_A Chromodomain-helicase-D 43.2 39 0.0013 22.1 4.5 48 300-355 10-57 (61)
198 2yql_A PHD finger protein 21A; 42.8 12 0.0004 24.3 1.8 49 299-355 7-55 (56)
199 2cs3_A Protein C14ORF4, MY039 41.7 20 0.0007 25.0 2.8 32 301-332 15-50 (93)
200 4g26_A Pentatricopeptide repea 41.4 65 0.0022 31.3 7.7 37 99-138 92-128 (501)
201 1mm2_A MI2-beta; PHD, zinc fin 40.1 25 0.00086 23.1 3.1 49 300-356 8-56 (61)
202 1fp0_A KAP-1 corepressor; PHD 39.7 33 0.0011 24.6 3.9 49 299-355 23-71 (88)
203 2ro1_A Transcription intermedi 39.2 17 0.0006 30.3 2.8 48 301-356 2-49 (189)
204 3nw0_A Non-structural maintena 38.5 32 0.0011 29.8 4.5 46 301-356 180-226 (238)
205 1gp8_A Protein (scaffolding pr 34.6 29 0.001 20.4 2.3 20 18-37 15-34 (40)
206 2puy_A PHD finger protein 21A; 30.7 15 0.00051 24.1 0.8 49 300-356 4-52 (60)
207 3mkq_B Coatomer subunit alpha; 30.7 2.2E+02 0.0075 23.2 10.3 48 208-263 93-141 (177)
208 1xwh_A Autoimmune regulator; P 30.4 23 0.00078 23.7 1.7 50 299-356 6-55 (66)
209 1y02_A CARP2, FYVE-ring finger 28.3 20 0.00068 27.5 1.2 28 301-328 19-50 (120)
210 2lbm_A Transcriptional regulat 28.3 23 0.00078 28.0 1.6 55 300-355 62-116 (142)
211 3ql9_A Transcriptional regulat 27.7 23 0.00078 27.5 1.4 32 300-331 56-87 (129)
212 4g26_A Pentatricopeptide repea 25.5 49 0.0017 32.1 3.8 150 20-198 33-209 (501)
213 1hcq_A Protein (estrogen recep 24.0 24 0.00083 25.0 0.9 29 300-331 3-31 (84)
214 2lze_A A primordial catalytic 23.2 41 0.0014 24.0 2.0 45 301-354 17-61 (87)
215 2ebl_A COUP transcription fact 22.0 66 0.0023 23.0 2.9 28 301-331 7-34 (89)
216 3h0g_L DNA-directed RNA polyme 21.5 36 0.0012 22.7 1.3 15 346-360 37-51 (63)
217 3vhs_A ATPase wrnip1; zinc fin 21.2 20 0.00068 18.9 -0.0 11 346-356 5-15 (29)
218 2l43_A N-teminal domain from h 20.8 80 0.0027 22.5 3.2 48 299-356 23-75 (88)
219 3zrh_A Ubiquitin thioesterase 20.5 2.3E+02 0.0078 26.6 6.8 23 57-79 28-50 (454)
220 2ku3_A Bromodomain-containing 20.3 83 0.0028 21.4 3.0 49 297-355 12-65 (71)
221 1z2q_A LM5-1; membrane protein 20.2 49 0.0017 23.3 1.9 28 301-328 21-52 (84)
222 1dsz_B RXR-alpha, retinoic aci 20.2 37 0.0013 24.2 1.2 29 300-331 4-32 (85)
223 2nll_B Protein (thyroid hormon 20.1 24 0.00081 26.2 0.2 26 302-330 2-27 (103)
No 1
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.3e-39 Score=292.49 Aligned_cols=225 Identities=26% Similarity=0.323 Sum_probs=201.1
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++|+.|++.|+++.+++|++.++.... ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 83 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLAT-RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA 83 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGG-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhh-cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc
Confidence 567899999999999999999998866432 3345679999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEV 174 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++..... ....+.++
T Consensus 84 ~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--------------------~~~~g~t~ 142 (231)
T 3aji_A 84 GXDEIVKALLVKGAHVNAVNQ-NGCTPLHYAASKNRHEIAVMLLEGGANPDA--------------------KDHYDATA 142 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------------------CCTTSCCH
T ss_pred CHHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--------------------cCCCCCcH
Confidence 999999999999999999886 899999999999999999999987543210 11223445
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchh
Q 014696 175 LLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTG 254 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 254 (420)
+..|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+..++.+
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKASTN---IQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCcc---ccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHH
Confidence 566699999999999999999999 77889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCC
Q 014696 255 LEDILSTQPE 264 (420)
Q Consensus 255 i~~lL~~~~~ 264 (420)
++++|.++++
T Consensus 220 i~~lL~~~~a 229 (231)
T 3aji_A 220 LKRLAEGEEA 229 (231)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHccccc
Confidence 9999987643
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.4e-39 Score=297.11 Aligned_cols=227 Identities=19% Similarity=0.160 Sum_probs=173.0
Q ss_pred CCCCCHHHHHHHHcC-------------CHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCC
Q 014696 13 CSASGERLVSAARDG-------------DLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINL 79 (420)
Q Consensus 13 ~~~~~~~L~~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~ 79 (420)
...+.++||.|+..| +.+++++|++.+++++... +..|.||||+|+..|+.+++++|+++|++++.
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 85 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANI 85 (253)
T ss_dssp ---------------------------------------------CC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 346678999999987 9999999999998876532 34579999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccC
Q 014696 80 RNYRGQTALMQACQHGHWEVVLTLILYKA-NIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNK 158 (420)
Q Consensus 80 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga-~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~ 158 (420)
+|..|+||||+|+..|+.+++++|+++++ +++..+. .|.||||+|+..|+.+++++|++.+....
T Consensus 86 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------- 151 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILAARLAVEGMLEDLINSHADVN------------- 151 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCT-TCCCHHHHHHHHTCSSHHHHHHHTTCCTT-------------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHHHHHcChHHHHHHHHHcCCCCC-------------
Confidence 99999999999999999999999999987 7888776 89999999999999999999998754321
Q ss_pred CCCchhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccc
Q 014696 159 TGSILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAEN 237 (420)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d 237 (420)
..+ .+.++++.|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 152 --------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 152 --------AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD---MQNNREETPLFLAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp --------CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred --------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc
Confidence 122 23445556699999999999999999999 778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 238 ANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 238 ~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
..|+||+++|+++|+.+++++|......
T Consensus 221 ~~g~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 221 HMDRLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHC----
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 9999999999999999999999987654
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.1e-38 Score=301.52 Aligned_cols=258 Identities=25% Similarity=0.250 Sum_probs=211.3
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHh-CCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 16 SGERLVSAARDGDLQEAKALLEY-NPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
+.++|+.|++.|+.+.|++|+.. +.+++. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHA--SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCC--SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCccc--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 34789999999999999999986 444433 345679999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhH---HHHh------------------
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAW---NRLR------------------ 153 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~---~~~~------------------ 153 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++........ ..+.
T Consensus 102 g~~~iv~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 180 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNAMDL-WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGH 180 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhccc
Confidence 999999999999999999886 999999999999999999999998775432100 0000
Q ss_pred ----h---------hccCCCCchhcccccchhhHHHHHHhc---CCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHc
Q 014696 154 ----K---------KSNKTGSILEFDERYFHLEVLLHLTLN---GHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACG 217 (420)
Q Consensus 154 ----~---------~~~~~~~~~~~~~~~~~~~~~l~aa~~---g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~ 217 (420)
. ................+.+++..|+.. +..+++++|+++|++++ ..+..|.||||+|+..
T Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~ 257 (351)
T 3utm_A 181 SLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN---EKNKDFMTPLHVAAER 257 (351)
T ss_dssp HHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHT
T ss_pred HHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC---CcCCCCCCHHHHHHHc
Confidence 0 000000011112223334455556777 55899999999999999 7788999999999999
Q ss_pred CCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 218 GNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 218 g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++++|+++++. ....+..+.+|+..
T Consensus 258 g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad--~~~~~~~g~tal~~ 319 (351)
T 3utm_A 258 AHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD--PSIISLQGFTAAQM 319 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC--CCCcCCCCCChhhh
Confidence 999999999999999999999999999999999999999999999886 33456778888754
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-37 Score=289.55 Aligned_cols=249 Identities=23% Similarity=0.290 Sum_probs=211.0
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+.++|+.|++.|+++++++|++.+++++... +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 4579999999999999999999998887653 345689999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc-ccchhhH
Q 014696 96 HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE-RYFHLEV 174 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 174 (420)
+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.+........ ....... ...+.++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-----------~~~~~~~~~~~g~t~ 151 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECDF-YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK-----------TKEDQERLRKGGATA 151 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC-----------CCHHHHHTTCCCCCH
T ss_pred CHHHHHHHHHcCCCCCccCc-ccCCHHHHHHHhCCHHHHHHHHHhCCCcccccc-----------cHHHHHhhccCCCcH
Confidence 99999999999999999886 999999999999999999999988654321100 0000111 2223445
Q ss_pred HHHHHhcCCHHHHHHHHHc-CCCcccccccCCCCccHHHHHHHcCC----HHHHHHHHHhCCCccccccCCCCHHHHHHH
Q 014696 175 LLHLTLNGHVESVQLLLDL-GASVSEYLSVSGAGSTSLHYAACGGN----AQCCQILIAMGASLTAENANGWTPLMVARS 249 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~~-ga~~~~~~~~~~~g~TpLh~Aa~~g~----~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 249 (420)
+..|+..|+.+++++|++. |++++ ..+..|.||||+|+..++ .+++++|+++|++++.+|..|+||||+|+.
T Consensus 152 L~~A~~~~~~~~v~~Ll~~~~~~~~---~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 152 LMDAAEKGHVEVLKILLDEMGADVN---ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 228 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTSCCCTT---CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCCC---ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 5666999999999999997 99999 778899999999999999 999999999999999999999999999999
Q ss_pred cCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 250 WHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 250 ~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
.|+.+++++|++....+.. ..+..+.+|++.
T Consensus 229 ~~~~~~v~~Ll~~~g~~~~-~~~~~g~t~l~~ 259 (285)
T 1wdy_A 229 KKHLGLVQRLLEQEHIEIN-DTDSDGKTALLL 259 (285)
T ss_dssp TTCHHHHHHHHHSSSCCTT-CCCTTSCCHHHH
T ss_pred cCCHHHHHHHHhccCCCcc-ccCCCCCcHHHH
Confidence 9999999999984333233 346677777754
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=295.16 Aligned_cols=239 Identities=21% Similarity=0.199 Sum_probs=182.3
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCC---------cccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCC
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPR---------LVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQ 85 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~---------~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~ 85 (420)
.+.++||.|+..|+.+.+..++..++. -.....+..|+||||+|+..|+.+++++|++.|++++.+|..|+
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~ 93 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV 93 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCC
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 556889999999998888877665432 11223455679999999999999999999999999999999999
Q ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhc
Q 014696 86 TALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEF 165 (420)
Q Consensus 86 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.+....
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------------- 152 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSGSWDCVNLLLQHGASVQ-------------------- 152 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSS--------------------
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCHHHHHHHHHHCCCCCC--------------------
Confidence 999999999999999999999999999886 89999999999999999999998754321
Q ss_pred ccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHH
Q 014696 166 DERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLM 245 (420)
Q Consensus 166 ~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~ 245 (420)
....+.+++..|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++. |..|+||||
T Consensus 153 -~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~ 227 (285)
T 3d9h_A 153 -PESDLASPIHEAARRGHVECVNSLIAYGGNID---HKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLH 227 (285)
T ss_dssp -CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTT---CCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHH
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHH
Confidence 11224456666799999999999999999998 7788999999999999999999999999999994 889999999
Q ss_pred HHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 246 VARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 246 ~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
+|+..|+.+++++|++++.. ....+..+.+|++.
T Consensus 228 ~A~~~~~~~~v~~Ll~~gad--~~~~d~~g~t~l~~ 261 (285)
T 3d9h_A 228 AVVRTASEELACLLMDFGAD--TQAKNAEGKRPVEL 261 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCGGGG
T ss_pred HHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHH
Confidence 99999999999999998775 23356677777753
No 6
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-38 Score=289.63 Aligned_cols=226 Identities=29% Similarity=0.341 Sum_probs=195.9
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHH----hCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLE----YNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALM 89 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~----~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~ 89 (420)
..+.++||.|++.|+.+++++|++ .+.+++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|+||||
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN--NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH 84 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCccc--ccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 456789999999999999999997 566665544 45689999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHHHHcCC----CCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhc
Q 014696 90 QACQHGHWEVVLTLILYKA----NIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEF 165 (420)
Q Consensus 90 ~A~~~g~~~iv~~Ll~~ga----~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
+|+..|+.+++++|+++++ +++..+. .|.||||+|+..|+.+++++|++.+.....
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------- 144 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLTALHVAVNTECQETVQLLLERGADIDA------------------- 144 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccccccCc-CCCcHHHHHHHcCCHHHHHHHHHcCCCccc-------------------
Confidence 9999999999999999988 7777775 899999999999999999999987543211
Q ss_pred ccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHH
Q 014696 166 DERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLM 245 (420)
Q Consensus 166 ~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~ 245 (420)
.....+.++++.|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+|||+
T Consensus 145 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 145 VDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN---AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLM 221 (241)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTT
T ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHH
Confidence 011224455666699999999999999999999 77889999999999999999999999999999999999999999
Q ss_pred HHHHcCchhHHHHhhhCCC
Q 014696 246 VARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 246 ~A~~~g~~~i~~lL~~~~~ 264 (420)
+|+..|+.++++.|.+.++
T Consensus 222 ~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 222 VARSRRVIDILRGKATRPA 240 (241)
T ss_dssp TCSSHHHHHHHTC------
T ss_pred HHHhcCcHHHHhhhccCCC
Confidence 9999999999999988754
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=292.11 Aligned_cols=220 Identities=24% Similarity=0.305 Sum_probs=193.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++||.|+..|+.+++++|++.+.+++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA--DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 356899999999999999999999988776554 468999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhh
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLE 173 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 173 (420)
|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|++.+... +..+ .+.+
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------------------~~~~~~g~t 136 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNI---------------------DHKISHLGT 136 (261)
T ss_dssp TCHHHHHHHHHTTCCSSCSC--TTCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------TCCBTTTBC
T ss_pred CCHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHHcCCCC---------------------CcCCCCCCC
Confidence 99999999999999998654 6999999999999999999999875432 1122 2335
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCch
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRT 253 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 253 (420)
+++.|+..|+.+++++|+++|++++ . +..|.||||+|+..|+.+++++|+++|+|++.+|.+|+||+|+|+.+ .
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~g~~~~---~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~ 210 (261)
T 2xai_A 137 PLYLACENQQRACVKKLLESGADVN---Q-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--S 210 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTT---C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--C
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCCC---C-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--c
Confidence 5556699999999999999999998 3 67899999999999999999999999999999999999999999955 4
Q ss_pred hHHHHhhhCCCC
Q 014696 254 GLEDILSTQPEG 265 (420)
Q Consensus 254 ~i~~lL~~~~~~ 265 (420)
+++++|++.+..
T Consensus 211 ~~~~~ll~~~~~ 222 (261)
T 2xai_A 211 PLAQLFLEREGP 222 (261)
T ss_dssp THHHHHHHC-CC
T ss_pred cHHHHHHhccCC
Confidence 689999987553
No 8
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.4e-38 Score=283.74 Aligned_cols=222 Identities=24% Similarity=0.291 Sum_probs=197.1
Q ss_pred cCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHH
Q 014696 12 GCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQA 91 (420)
Q Consensus 12 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A 91 (420)
....+.++||.|+..|+.+++++|++++.+++..+. .|.||||+|+..|+.+++++|+++|++++.++..|.||||+|
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE--DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC--CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Confidence 345677899999999999999999999988776554 458999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHHcC-CCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-
Q 014696 92 CQHGHWEVVLTLILYK-ANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY- 169 (420)
Q Consensus 92 ~~~g~~~iv~~Ll~~g-a~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (420)
+..|+.+++++|++++ .+++..+. .|.||||+|+..|+.+++++|++++.... ..+
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------------------~~~~ 142 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWATEYKHVDLVKLLLSKGSDIN---------------------IRDN 142 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------------------CCCT
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCC---------------------ccCC
Confidence 9999999999999998 78888876 89999999999999999999998754321 122
Q ss_pred chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHH
Q 014696 170 FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARS 249 (420)
Q Consensus 170 ~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 249 (420)
.+.+++..|+..|+.+++++|+++|++++ ..+..|.||||+|++.|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCDLH---AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL 219 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 23345555699999999999999999999 778899999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHhh
Q 014696 250 WHRTGLEDILS 260 (420)
Q Consensus 250 ~g~~~i~~lL~ 260 (420)
+++.+.+..|.
T Consensus 220 ~~~~~~~~~l~ 230 (237)
T 3b7b_A 220 NSQVWSALQMS 230 (237)
T ss_dssp TCHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99986555544
No 9
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-37 Score=289.18 Aligned_cols=226 Identities=23% Similarity=0.263 Sum_probs=201.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++||.|+..|+.+++++|++.+++++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 38 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 38 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKK--NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 456899999999999999999999988776544 468999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccc---------cCCCChHHHHHHHcCCHHHHHHHHHh-cCCCChhhHHHHhhhccCCCCchh
Q 014696 95 GHWEVVLTLILYKANIHRAD---------YLNGGTALHLAALNGHSRCIRLLLAD-YIPSVPNAWNRLRKKSNKTGSILE 164 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~---------~~~g~tpL~~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~ 164 (420)
|+.+++++|+++|++++..+ +..|.||||+|+..|+.+++++|++. +....
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------------------- 176 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN------------------- 176 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTT-------------------
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCC-------------------
Confidence 99999999999999998772 23799999999999999999999975 32111
Q ss_pred cccccchhhHHHHHHhcCC----HHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHH-hCCCccccccC
Q 014696 165 FDERYFHLEVLLHLTLNGH----VESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIA-MGASLTAENAN 239 (420)
Q Consensus 165 ~~~~~~~~~~~l~aa~~g~----~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~-~gad~~~~d~~ 239 (420)
.....+.+++++|+..++ .+++++|+++|++++ .++..|.||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 177 -~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~ 252 (285)
T 1wdy_A 177 -ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 252 (285)
T ss_dssp -CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTT
T ss_pred -ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCC
Confidence 111224455666688888 999999999999999 778899999999999999999999999 79999999999
Q ss_pred CCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 240 GWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 240 G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
|+||||+|+++|+.+++++|+++++.
T Consensus 253 g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 253 GKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999876
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=292.20 Aligned_cols=222 Identities=23% Similarity=0.306 Sum_probs=196.7
Q ss_pred CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Q 014696 13 CSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQAC 92 (420)
Q Consensus 13 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~ 92 (420)
...+.++||.|+..|+.++|++|++.+.+++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 56 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 56 AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA--DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp SCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT--TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred CccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34667899999999999999999999988876554 4589999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-ch
Q 014696 93 QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FH 171 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 171 (420)
..|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|++.+... +..+ .+
T Consensus 134 ~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---------------------~~~d~~g 190 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNI---------------------DHKISHL 190 (285)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCCT---------------------TCCBTTT
T ss_pred HcCHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC---------------------CCcCCCC
Confidence 9999999999999999998655 5999999999999999999999875422 1122 23
Q ss_pred hhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcC
Q 014696 172 LEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWH 251 (420)
Q Consensus 172 ~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g 251 (420)
.+++..|+..|+.+++++|+++|++++ . +..|.||||+|+..|+.+++++|+++|+|++.+|.+|+|||++|+ +
T Consensus 191 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~ 264 (285)
T 3d9h_A 191 GTPLYLACENQQRACVKKLLESGADVN---Q-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--P 264 (285)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCTT---C-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--T
T ss_pred CCHHHHHHHcCcHHHHHHHHHCCCCCC---C-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--C
Confidence 355556699999999999999999998 3 678999999999999999999999999999999999999999999 5
Q ss_pred chhHHHHhhhCCCC
Q 014696 252 RTGLEDILSTQPEG 265 (420)
Q Consensus 252 ~~~i~~lL~~~~~~ 265 (420)
+.+++++|+++...
T Consensus 265 ~~~~~~~Ll~~~~a 278 (285)
T 3d9h_A 265 ESPLAQLFLEREGA 278 (285)
T ss_dssp TSHHHHHHHHHC--
T ss_pred ccHHHHHHHHhhcc
Confidence 57899999988444
No 11
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-37 Score=307.48 Aligned_cols=226 Identities=28% Similarity=0.335 Sum_probs=163.7
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++||.|+..|+.+++++|++.+.+.+..+. .|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 111 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 188 (437)
T 1n11_A 111 TAGHTPLHIAAREGHVETVLALLEKEASQACMTK--KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVH 188 (437)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 3566899999999999999999999887665443 45899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.+...... ...+.+
T Consensus 189 ~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~--------------------~~~g~t 247 (437)
T 1n11_A 189 HNNLDIVKLLLPRGGSPHSPAW-NGYTPLHIAAKQNQVEVARSLLQYGGSANAE--------------------SVQGVT 247 (437)
T ss_dssp TTCHHHHHHHGGGTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--------------------CTTCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC--------------------CCCCCC
Confidence 9999999999999999988875 8999999999999999999999875432210 111222
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCch
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRT 253 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 253 (420)
++..|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.
T Consensus 248 ~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 324 (437)
T 1n11_A 248 PLHLAAQEGHAEMVALLLSKQANGN---LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNI 324 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCS
T ss_pred HHHHHHHCCCHHHHHHHHhcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcH
Confidence 3333355555555555555555555 4445555555555555555555555555555555555555555555555555
Q ss_pred hHHHHhhhCCCC
Q 014696 254 GLEDILSTQPEG 265 (420)
Q Consensus 254 ~i~~lL~~~~~~ 265 (420)
+++++|++++..
T Consensus 325 ~~v~~Ll~~gad 336 (437)
T 1n11_A 325 KLVKFLLQHQAD 336 (437)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHhcCCC
Confidence 555555555443
No 12
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-37 Score=304.42 Aligned_cols=261 Identities=26% Similarity=0.268 Sum_probs=203.6
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++||.|+..|++++|++|++++.+++..+. .|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+.
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~--~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNV--KVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSS--CCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 3566899999999999999999999988776544 45899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChh---hHHHHhhhc--cCC-------CC
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPN---AWNRLRKKS--NKT-------GS 161 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~---~~~~~~~~~--~~~-------~~ 161 (420)
.|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++...... ....+.... +.. ..
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 168 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER 168 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 9999999999999999999886 8999999999999999999999886543210 000110000 000 00
Q ss_pred chhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCC
Q 014696 162 ILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANG 240 (420)
Q Consensus 162 ~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G 240 (420)
....+..+ .+.+++..|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++..+..|
T Consensus 169 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 245 (437)
T 1n11_A 169 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH---SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQG 245 (437)
T ss_dssp TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 01112222 23344555588888888888888888887 567778889999888888899999998888888888888
Q ss_pred CCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 241 WTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 241 ~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
+||||+|+..|+.+++++|++.+... ...+..+.+|++.+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~g~t~L~~A 285 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANG--NLGNKSGLTPLHLV 285 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCTTCCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCC--CCCCCCCCCHHHHH
Confidence 99999999999999999888876652 23456667776544
No 13
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-37 Score=289.46 Aligned_cols=244 Identities=20% Similarity=0.150 Sum_probs=162.3
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcc-cccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLV-RYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQAC 92 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~-~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~ 92 (420)
..+.++||.|++.|+.++|++|++.+++.. ....+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC 86 (282)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 466789999999999999999999988743 2334456799999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCcccc------------CCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCC
Q 014696 93 QHGHWEVVLTLILYKANIHRADY------------LNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTG 160 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~ga~~~~~~~------------~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~ 160 (420)
..|+.+++++|++++++...... ..+.++++.+...+....+..++..
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 146 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED-------------------- 146 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC--------------------
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhh--------------------
Confidence 99999999999998876432211 1345555555554443332222210
Q ss_pred Cchhcccccchh-hHHHHHHhcCCHHHHHHHHHcCCCcccccccCC-CCccHHHHHHHcCCHHHHHHHHHhCCCcccccc
Q 014696 161 SILEFDERYFHL-EVLLHLTLNGHVESVQLLLDLGASVSEYLSVSG-AGSTSLHYAACGGNAQCCQILIAMGASLTAENA 238 (420)
Q Consensus 161 ~~~~~~~~~~~~-~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~-~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 238 (420)
.....+..+..+ ++++.|+..|+.+++++|+++|++++ ..+. .|.||||+|+..|+.++|++|+++|++++.+|.
T Consensus 147 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN---KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred hhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 011122222233 34444577788888888888888887 4443 488888888888888888888888888888888
Q ss_pred CCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 239 NGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 239 ~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
.|+||||+|+.+|+.+++++|+++++.. ...+..+.+|+..+
T Consensus 224 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 224 GGRTPLGSALLRPNPILARLLRAHGAPE--PEDGGDKLSPCSSS 265 (282)
T ss_dssp TSCCHHHHHHTSSCHHHHHHHHHTTCCC--CCCC----------
T ss_pred CCCCHHHHHHHcCCcHHHHHHHHcCCCc--CcCCCccccccccc
Confidence 8888888888888888888888887762 23466666666544
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=295.27 Aligned_cols=217 Identities=25% Similarity=0.315 Sum_probs=165.5
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcc------cccCCCCCCcHHHHHHHcCcHH-HHHHHHHcCCCCCCccCCCCCHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLV------RYSTFGVRNSPLHYSAAQGHHE-IVSLLIESGVDINLRNYRGQTAL 88 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~------~~~~~~~g~t~Lh~Aa~~g~~~-iv~~Ll~~g~~v~~~d~~g~TpL 88 (420)
+.++|+.|++.|++++|++|++.++... ....+..|.||||+|+..++.+ ++++|++.|+++|.+|.+|+|||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 3479999999999999999999876532 1223345689999999988764 88999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc
Q 014696 89 MQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER 168 (420)
Q Consensus 89 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
|+|+..|+.++|++|++.|++++..+. .|.||+++|+..++.+++++|++.+.... ..
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n---------------------~~ 148 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANAGARNA-DQAVPLHLACQQGHFQVVKCLLDSNAKPN---------------------KK 148 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------------------CC
T ss_pred HHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCccccccccChHHHHHHHHHCCCCCC---------------------CC
Confidence 999999999999999999999999886 99999999999999999999998754321 12
Q ss_pred c-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 169 Y-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 169 ~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
+ .+.++++.|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.++|++|+++|+|++.+|.+|+||||+|
T Consensus 149 d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn---~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 149 DLSGNTPLIYACSGGHHELVALLLQHGASIN---ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp CTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 2 23445566699999999999999999999 7788999999999999999999999999999999999999999999
Q ss_pred HHcCchhHHHHh
Q 014696 248 RSWHRTGLEDIL 259 (420)
Q Consensus 248 ~~~g~~~i~~lL 259 (420)
+++++ ++++|
T Consensus 226 ~~~~~--i~~lL 235 (269)
T 4b93_B 226 EQNSK--IMELL 235 (269)
T ss_dssp CTTCH--HHHHT
T ss_pred HhCCc--HHHHH
Confidence 98775 44444
No 15
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-37 Score=302.27 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=198.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHH--------HhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCC
Q 014696 15 ASGERLVSAARDGDLQEAKALL--------EYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQT 86 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll--------~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~T 86 (420)
.+.++||.|+..|+.+++++|+ +.+.+++..+. .|.||||+|+..|+.++|++|+++|++++..|..|.|
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~--~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC--DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC--CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 5668999999999998888776 67887776544 5689999999999999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHHcC---CCCCccccCCCChHHHHHHHcC---CHHHHHHHHHhcCCCChhhHHHHhhhccCCC
Q 014696 87 ALMQACQHGHWEVVLTLILYK---ANIHRADYLNGGTALHLAALNG---HSRCIRLLLADYIPSVPNAWNRLRKKSNKTG 160 (420)
Q Consensus 87 pL~~A~~~g~~~iv~~Ll~~g---a~~~~~~~~~g~tpL~~A~~~g---~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~ 160 (420)
|||+|+..|+.+++++|++++ ++++..+. .|.||||+|+..+ +.+++++|++++........
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~----------- 269 (373)
T 2fo1_E 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA----------- 269 (373)
T ss_dssp HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSG-----------
T ss_pred HHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccc-----------
Confidence 999999999999999999987 78888886 8999999999988 89999999988654432110
Q ss_pred Cchhccccc-chhhHHHHHHhcCCHHHHHHHHHcC-CCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcccccc
Q 014696 161 SILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLG-ASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENA 238 (420)
Q Consensus 161 ~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~g-a~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 238 (420)
...+..+ .+.++++.|+..|+.+++++|++++ ++++ ..|..|.||||+|+..|+.++|++|+++|++++.+|.
T Consensus 270 --~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n---~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 270 --ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD---KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp --GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred --cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 0111122 3345555669999999999999886 9999 7888999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 239 NGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 239 ~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
.|+|||++|+.+|+.+++++|+++++.
T Consensus 345 ~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 345 TDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999999999999999999998764
No 16
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.2e-37 Score=299.15 Aligned_cols=223 Identities=19% Similarity=0.204 Sum_probs=197.7
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++||.|+..|+.++|++|++.+.+++..+. .|.||||+|+..|+.++|++|+++|++++. ..|.||||+|+..
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~ 94 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR--FGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMA 94 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC--CCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHc
Confidence 456899999999999999999999988876554 568999999999999999999999996664 5799999999999
Q ss_pred CcHHHHHHHHHc----CCCCCc-----------------cccCCCChHHHHHHHcC--CHHHHHHHHHhcCCCChhhHHH
Q 014696 95 GHWEVVLTLILY----KANIHR-----------------ADYLNGGTALHLAALNG--HSRCIRLLLADYIPSVPNAWNR 151 (420)
Q Consensus 95 g~~~iv~~Ll~~----ga~~~~-----------------~~~~~g~tpL~~A~~~g--~~~iv~~Ll~~~~~~~~~~~~~ 151 (420)
|+.++|++|+++ |++++. .+. .|.||||+|+..| +.+++++|++.+.....
T Consensus 95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~----- 168 (364)
T 3ljn_A 95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTA----- 168 (364)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-----
T ss_pred CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-----
Confidence 999999999999 888776 665 8999999999999 99999999987543220
Q ss_pred HhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCC-----cccccccCCCCccHHHHHHHcCCHHHHHHH
Q 014696 152 LRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGAS-----VSEYLSVSGAGSTSLHYAACGGNAQCCQIL 226 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~-----~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~L 226 (420)
....+.++++.|+..|+.+++++|+++|++ ++ ..+..|.||||+|+..|+.++|++|
T Consensus 169 ---------------~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~---~~~~~g~t~L~~A~~~g~~~~v~~L 230 (364)
T 3ljn_A 169 ---------------KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD---YANKQGNSHLHWAILINWEDVAMRF 230 (364)
T ss_dssp ---------------CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT---CCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred ---------------cCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc---ccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 112234556666999999999999999999 77 7788999999999999999999999
Q ss_pred HHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 227 IAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 227 l~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
+++|+|++.+|..|+||||+|+..|+.+++++|+++++.
T Consensus 231 l~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 269 (364)
T 3ljn_A 231 VEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269 (364)
T ss_dssp HTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCH
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999998765
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.2e-37 Score=276.11 Aligned_cols=215 Identities=19% Similarity=0.145 Sum_probs=184.4
Q ss_pred CCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHc
Q 014696 27 GDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILY 106 (420)
Q Consensus 27 g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 106 (420)
|+.+++++|++.+++++... +..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQT-DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCccccc-CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 67888899999988876542 34568999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc-hhhHHHHHHhcCCH
Q 014696 107 KA-NIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF-HLEVLLHLTLNGHV 184 (420)
Q Consensus 107 ga-~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~aa~~g~~ 184 (420)
++ +++..+. .|.||||+|+..|+.+++++|++++.... ..+. +.++++.|+..|+.
T Consensus 81 ~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------------------~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 81 RATDLDARMH-DGTTPLILAARLAVEGMLEDLINSHADVN---------------------AVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp TTSCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------------CBCTTSCBHHHHHHHTTCH
T ss_pred CCCCcccCCC-CCCcHHHHHHHhCcHHHHHHHHHcCCCCc---------------------CcCCCCCcHHHHHHHcCCH
Confidence 87 7777665 89999999999999999999998643321 1122 33455556899999
Q ss_pred HHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 185 ESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 185 ~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||+++|+++++.+++++|++++.
T Consensus 139 ~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 139 DAAVVLLKNGANKD---MQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCC---CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 99999999999999 778899999999999999999999999999999999999999999999999999999999988
Q ss_pred Ccc
Q 014696 265 GRL 267 (420)
Q Consensus 265 ~~~ 267 (420)
...
T Consensus 216 ~~~ 218 (223)
T 2f8y_A 216 VRS 218 (223)
T ss_dssp SSC
T ss_pred Ccc
Confidence 643
No 18
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.1e-36 Score=291.07 Aligned_cols=293 Identities=22% Similarity=0.262 Sum_probs=219.6
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+.++|+.|++.||+++|++||++|++++..+. ..|+||||+|+..|+.++|++|+++|++++.++..+.++++.++..+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~-~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEE-EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 35789999999999999999999999886543 34689999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc-cchhhH
Q 014696 96 HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER-YFHLEV 174 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 174 (420)
...++..+++.+++++..+. .|.||||+|+..|+.+++++|++++....... ......... ..+.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~-~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~-----------~~~~~~~~~~~~g~T~ 171 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDF-YGFTAFMEAAVYGKVKALKFLYKRGANVNLRR-----------KTKEDQERLRKGGATA 171 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCT-TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------CCC-----CTTCSCCH
T ss_pred cchhhHHhhhccchhhhhcc-CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhh-----------ccccccccccCCCCcH
Confidence 99999999999999999986 99999999999999999999999876432110 001111111 223345
Q ss_pred HHHHHhcCCHHHHHHHHH-cCCCcccccccCCCCccHHHHHHHcCC----HHHHHHHHHhCCCccccccCCCCHHHHHHH
Q 014696 175 LLHLTLNGHVESVQLLLD-LGASVSEYLSVSGAGSTSLHYAACGGN----AQCCQILIAMGASLTAENANGWTPLMVARS 249 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~-~ga~~~~~~~~~~~g~TpLh~Aa~~g~----~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~ 249 (420)
++.|+..|+.++|++|++ .|++++ ..+..|.|+||.++..++ .+++++|+++|+++|.+|..|+||||+|+.
T Consensus 172 L~~A~~~g~~~~v~~LL~~~gad~n---~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLDEMGADVN---ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 248 (337)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCCCTT---CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhccCCCcC---ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 555688899999998885 588888 677788888887776543 357888888888888888888888888888
Q ss_pred cCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCCCCCCCCCcccccCccceEEEeCCCcccchhhHH
Q 014696 250 WHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDSLSTCPDPCVVCLERKCTVAAKGCDHEFCTQCAL 329 (420)
Q Consensus 250 ~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~~~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~ 329 (420)
.|+.+++++|++....+... .+..+.||++ +|.+.|+.++++++.+.+.-+-+. .....|...||..+++.++
T Consensus 249 ~~~~~~v~~Ll~~~~~~vn~-~d~~G~TpL~----~A~~~g~~~iv~~Ll~~GAd~n~~--~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 249 KKHLGLVQRLLEQEHIEIND-TDSDGKTALL----LAVELKLKKIAELLCKRGASTDCG--DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp TTCHHHHHHHHTSTTCCTTC-BCTTSCBHHH----HHHHTTCHHHHHHHHTTSCSSTTC--CHHHHHHHTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHhcCCcccC-cCCCCCCHHH----HHHHcCCHHHHHHHHHCCCCCCCC--CHHHHHHHcCCHHHHHHHH
Confidence 88888888888765443333 4566777765 345555555544432221111111 1233445567776666554
Q ss_pred HH
Q 014696 330 YL 331 (420)
Q Consensus 330 ~l 331 (420)
..
T Consensus 322 ~~ 323 (337)
T 4g8k_A 322 SH 323 (337)
T ss_dssp HT
T ss_pred HC
Confidence 43
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.4e-37 Score=275.36 Aligned_cols=218 Identities=24% Similarity=0.286 Sum_probs=188.9
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcC--CCCCC-ccCCCCCHHHHHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESG--VDINL-RNYRGQTALMQAC 92 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g--~~v~~-~d~~g~TpL~~A~ 92 (420)
+.++||.|++.|+.+++++|++.++..... .+..|+||||+|+..|+.+++++|+++| .+++. .+..|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccccc-CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 357999999999999999999999776542 3445799999999999999999999999 55655 7889999999999
Q ss_pred HcCcHHHHHHHHHcC--CCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-
Q 014696 93 QHGHWEVVLTLILYK--ANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY- 169 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~g--a~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (420)
..|+.+++++|+++| ++++..+. .|.||||+|+..|+.+++++|++++.... ..+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------------------~~~~ 138 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITN-QGVTCLHLAVGKKWFEVSQFLIENGASVR---------------------IKDK 138 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCSC---------------------CCCT
T ss_pred HcCCHHHHHHHHhCCCCcccccCCc-CCCCHHHHHHHcCCHhHHHHHHHcCCCcc---------------------ccCC
Confidence 999999999999998 88888886 89999999999999999999998754321 222
Q ss_pred chhhHHHHHHhcCCHHHHHHHHHcC-CCcccccccCCCCccHHHHHHHcCCHHHHHHHH-HhCCCccccccCCCCHHHHH
Q 014696 170 FHLEVLLHLTLNGHVESVQLLLDLG-ASVSEYLSVSGAGSTSLHYAACGGNAQCCQILI-AMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 170 ~~~~~~l~aa~~g~~~~v~~Ll~~g-a~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll-~~gad~~~~d~~G~TpL~~A 247 (420)
.+.+++..|+..|+.+++++|+++| ++++ ..+..|.||||+|+..|+.+++++|+ ++|++++.+|..|+||+++|
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAVN---WQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCSC---CCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCccccc---CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHH
Confidence 2334555569999999999999999 9998 77889999999999999999999999 88999999999999999999
Q ss_pred HHcCchhHHHHhhhC
Q 014696 248 RSWHRTGLEDILSTQ 262 (420)
Q Consensus 248 ~~~g~~~i~~lL~~~ 262 (420)
++. +++++|+++
T Consensus 216 ~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 216 LNE---QVKKFFLNN 227 (228)
T ss_dssp SST---THHHHHHTT
T ss_pred HHH---HHHHHHHhc
Confidence 754 677777654
No 20
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-37 Score=289.46 Aligned_cols=242 Identities=23% Similarity=0.246 Sum_probs=190.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.++++|+.|+..|+.++|++|++.+++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANV--DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT--TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 456899999999999999999999998876554 468999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhh-------hccCCCCchhccc
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRK-------KSNKTGSILEFDE 167 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 167 (420)
|+.++|++|+++|++++..+. .|.||||+|+..++.+++++++................ .............
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNS-EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred CCHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 999999999999999999986 99999999999999999999987644332211100000 0000000011111
Q ss_pred ccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 168 RYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 168 ~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
...+.++++.|+..|+.+++++|+++|++++ ..|..|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVN---IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 2234455555688889999999999998888 6778889999999999999999999999999988899999999998
Q ss_pred HHcCchhHHHHhhhC
Q 014696 248 RSWHRTGLEDILSTQ 262 (420)
Q Consensus 248 ~~~g~~~i~~lL~~~ 262 (420)
++.....+.+++.+.
T Consensus 273 ~~~~~~~l~~l~~~~ 287 (299)
T 1s70_B 273 DEDILGYLEELQKKQ 287 (299)
T ss_dssp CSGGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 765544444444443
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-36 Score=283.08 Aligned_cols=234 Identities=23% Similarity=0.179 Sum_probs=174.9
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHH
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIESGVD---INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALH 123 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~---v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~ 123 (420)
.+..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.++|++|+++|++++..+. .|+||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 345679999999999999999999999988 889999999999999999999999999999999999986 9999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHH-HhcCCHHHHHHHHHcCCCcccccc
Q 014696 124 LAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHL-TLNGHVESVQLLLDLGASVSEYLS 202 (420)
Q Consensus 124 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a-a~~g~~~~v~~Ll~~ga~~~~~~~ 202 (420)
+|+..|+.+++++|++++................ ..........+..+ ...........+...+.+++ .
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 153 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ-------DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE---A 153 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC------------------------------------------CCCGGGGTT---C
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhccc-------ccCcchhcchhhhccccccchhhhhhhhhhhhcCC---C
Confidence 9999999999999998765433221111110000 00011112222222 33334455566667777887 7
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccC-CCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENAN-GWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~-G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
.+..|.||||+|+..|+.+++++|+++|++++.++.. |+||||+|+.+|+.+++++|++++... ...+..+.+|++.
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~--~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP--TARMYGGRTPLGS 231 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCHHHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC--cccccCCCCHHHH
Confidence 7889999999999999999999999999999999865 999999999999999999999997762 3356778888865
Q ss_pred H--------HHHHHHcCCCC
Q 014696 282 I--------VKIARECGWRN 293 (420)
Q Consensus 282 ~--------l~~a~~~g~~~ 293 (420)
+ +++..+.|...
T Consensus 232 A~~~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 232 ALLRPNPILARLLRAHGAPE 251 (282)
T ss_dssp HHTSSCHHHHHHHHHTTCCC
T ss_pred HHHcCCcHHHHHHHHcCCCc
Confidence 4 45666666553
No 22
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=272.92 Aligned_cols=223 Identities=25% Similarity=0.319 Sum_probs=194.6
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccC-CCCCHHHHHHHc
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNY-RGQTALMQACQH 94 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~-~g~TpL~~A~~~ 94 (420)
+.++|+.|++.|+.+++++|++.+.+++..+. .|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQPDK--ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCCCCC--CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 44679999999999999999999988766544 468999999999999999999999999986654 499999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhh
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLE 173 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 173 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++... +..+ .+.+
T Consensus 87 ~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~~~---------------------~~~~~~g~t 144 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSLIDG-EGCSCIHLAAQFGHTSIVAYLIAKGQDV---------------------DMMDQNGMT 144 (240)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHTTCCT---------------------TCCCTTSCC
T ss_pred CCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCHHHHHHHHHhcCCCc---------------------cccCCCCCc
Confidence 999999999999999999886 8999999999999999999999875322 1122 2334
Q ss_pred HHHHHHhcCC-HHHHHHHHHcCCCcccccccCC-CCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcC
Q 014696 174 VLLHLTLNGH-VESVQLLLDLGASVSEYLSVSG-AGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWH 251 (420)
Q Consensus 174 ~~l~aa~~g~-~~~v~~Ll~~ga~~~~~~~~~~-~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g 251 (420)
+++.|+..++ .+++++|++.|++++ ..+. .|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|++.|
T Consensus 145 ~l~~a~~~~~~~~~~~~L~~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 145 PLMWAAYRTHSVDPTRLLLTFNVSVN---LGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp HHHHHHHHCCSSTTHHHHHHTTCCTT---CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred HHHHHHHhCChHHHHHHHHhcCCCcc---hhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 5555664554 899999999999999 5555 8999999999999999999999999999999999999999999999
Q ss_pred chhHHHHhhhCCCC
Q 014696 252 RTGLEDILSTQPEG 265 (420)
Q Consensus 252 ~~~i~~lL~~~~~~ 265 (420)
+.+++++|++.+..
T Consensus 222 ~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 222 NVWMINHLQEARQA 235 (240)
T ss_dssp CHHHHHHHHHHC--
T ss_pred cHHHHHHHHHhhhc
Confidence 99999999998765
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=277.16 Aligned_cols=203 Identities=22% Similarity=0.247 Sum_probs=182.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSGS 81 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999986 99999999999999
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS 210 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp 210 (420)
.+++++|++++.... ....+.++++.|+..|+.+++++|+++|++++ ..+..|.||
T Consensus 82 ~~~v~~Ll~~g~~~~---------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~ 137 (261)
T 2xai_A 82 WDCVNLLLQHGASVQ---------------------PESDLASPIHEAARRGHVECVNSLIAYGGNID---HKISHLGTP 137 (261)
T ss_dssp HHHHHHHHHTTCCSS---------------------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCBTTTBCH
T ss_pred HHHHHHHHHCCCCCC---------------------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC---cCCCCCCCH
Confidence 999999998754332 11224456666799999999999999999999 778899999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 211 LHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 211 Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
||+|+..|+.+++++|+++|++++. +..|+||||+|+..|+.+++++|++.++. ....+..+.+|++.
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad--~~~~d~~g~tpl~~ 205 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD--TQAKNAEGKRPVEL 205 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCGGGG
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCChhhh
Confidence 9999999999999999999999995 88999999999999999999999999876 33457778888754
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.8e-35 Score=267.98 Aligned_cols=212 Identities=28% Similarity=0.360 Sum_probs=186.9
Q ss_pred cccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHH
Q 014696 44 RYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALH 123 (420)
Q Consensus 44 ~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~ 123 (420)
....+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHH
Confidence 334555679999999999999999999999999999999999999999999999999999999999999886 8999999
Q ss_pred HHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccc
Q 014696 124 LAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLS 202 (420)
Q Consensus 124 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~ 202 (420)
+|+..|+.+++++|++.+.. ..+..+ .+.+++..|+..|+.+++++|+++|++++ .
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~--------------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~ 139 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQM--------------------DVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN---I 139 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCC--------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---C
T ss_pred HHHHcCCHHHHHHHHhCCCC--------------------CcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---c
Confidence 99999999999999976421 111122 23445556699999999999999999999 7
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHH
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMS 281 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~ 281 (420)
.+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++... ...+..+.+|++.
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~--~~~d~~g~t~l~~ 216 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDV--TLKNKEGETPLQC 216 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT--TCCCTTSCCHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCC--CccCCCCCCHHHH
Confidence 7889999999999999999999999999999999999999999999999999999999998762 3357778888754
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.9e-37 Score=285.82 Aligned_cols=216 Identities=18% Similarity=0.171 Sum_probs=145.9
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++||.|+..|+.++|++|++.+++++.. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVD 104 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHH
Confidence 35556777777777777777777776665543 24677777777777777777777777777777777777777777
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCC-ChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNG-GTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHL 172 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g-~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
.|+.+++++|+++|++++..+. .| .||||+|+..|+.+++++|++++.... ....+.
T Consensus 105 ~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------------------~~~~g~ 162 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---------------------DLAILL 162 (285)
T ss_dssp TTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHTTCHHHHHHHHTTSCTTC---------------------CCSTHH
T ss_pred cCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHcCCHHHHHHHHhCCCccc---------------------cccCCc
Confidence 7777777777777777776665 55 677777777777777777776532110 001233
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH-HHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcC
Q 014696 173 EVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS-LHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWH 251 (420)
Q Consensus 173 ~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp-Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g 251 (420)
++++.|+..|+.+++++|+++|++++ ..+..|.|| ||+|+..|+.+++++|+++|++++.+|. .|+..|
T Consensus 163 t~L~~A~~~g~~~~v~~Ll~~gad~n---~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~ 232 (285)
T 3kea_A 163 SCIHITIKNGHVDMMILLLDYMTSTN---TNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLD 232 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTC---TTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTT
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCC---cccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcC
Confidence 44444577777777777777777776 556667776 7777777777777777777777776663 455667
Q ss_pred chhHHHHhhhCCCC
Q 014696 252 RTGLEDILSTQPEG 265 (420)
Q Consensus 252 ~~~i~~lL~~~~~~ 265 (420)
+.+++++|++++..
T Consensus 233 ~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 233 DAEIAKMIIEKHVE 246 (285)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCC
Confidence 77777777766543
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-35 Score=283.00 Aligned_cols=222 Identities=23% Similarity=0.294 Sum_probs=192.0
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++||.|+..|+.++|++|++++++++..+. .|+||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 56 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDK--GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS 133 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC--CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 3567899999999999999999999998876554 46899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCcccc-----------------------------------------------------CCCCh
Q 014696 94 HGHWEVVLTLILYKANIHRADY-----------------------------------------------------LNGGT 120 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~-----------------------------------------------------~~g~t 120 (420)
.|+.+++++|+++|++++..+. ..|.|
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t 213 (351)
T 3utm_A 134 KNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCC
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999999876432 35778
Q ss_pred HHHHHHHc---CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc-hhhHHHHHHhcCCHHHHHHHHHcCCC
Q 014696 121 ALHLAALN---GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF-HLEVLLHLTLNGHVESVQLLLDLGAS 196 (420)
Q Consensus 121 pL~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~aa~~g~~~~v~~Ll~~ga~ 196 (420)
|||+|+.. +..+++++|++.+... +..+. +.++++.|+..|+.+++++|+++|++
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~~g~~~---------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 272 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLRKGANV---------------------NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK 272 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHHTTCCT---------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCccHHHHHHHHHHcCCCc---------------------CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99999988 5578999998765332 12222 33455556999999999999999999
Q ss_pred cccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 197 VSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 197 ~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
++ .+|..|.||||+|+..|+.++|++|+++|+|++.+|..|+||+++| +.+++++|.+....
T Consensus 273 ~n---~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 273 MN---ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp TT---CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred CC---CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 99 7789999999999999999999999999999999999999999998 67899999888665
No 27
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.9e-36 Score=273.99 Aligned_cols=221 Identities=22% Similarity=0.231 Sum_probs=162.5
Q ss_pred CCCCCCcHHHHHHHcC-------------cHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc
Q 014696 47 TFGVRNSPLHYSAAQG-------------HHEIVSLLIESGVDINL-RNYRGQTALMQACQHGHWEVVLTLILYKANIHR 112 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g-------------~~~iv~~Ll~~g~~v~~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~ 112 (420)
.+..|+||||+|+..| +.+++++|+++|++++. .|..|+||||+|+..|+.++|++|+++|++++.
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 85 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI 85 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 3456799999999987 89999999999999965 489999999999999999999999999999999
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc-cchhhHHHHHHhcCCHHHHHHHH
Q 014696 113 ADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER-YFHLEVLLHLTLNGHVESVQLLL 191 (420)
Q Consensus 113 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~aa~~g~~~~v~~Ll 191 (420)
.+. .|.||||+|+..|+.+++++|++++... .+.. ..+.+++..|+..|+.+++++|+
T Consensus 86 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--------------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 144 (253)
T 1yyh_A 86 QDN-MGRTPLHAAVSADAQGVFQILIRNRATD--------------------LDARMHDGTTPLILAARLAVEGMLEDLI 144 (253)
T ss_dssp CCT-TSCCHHHHHHHHTCHHHHHHHHHSTTSC--------------------TTCCCTTCCCHHHHHHHHTCSSHHHHHH
T ss_pred CCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC--------------------ccccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 986 9999999999999999999999864311 1112 22344556669999999999999
Q ss_pred HcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCC
Q 014696 192 DLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLP 271 (420)
Q Consensus 192 ~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~ 271 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++++.. ...
T Consensus 145 ~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~ 219 (253)
T 1yyh_A 145 NSHADVN---AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR--DIT 219 (253)
T ss_dssp HTTCCTT---CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--TCC
T ss_pred HcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc--ccc
Confidence 9999999 77889999999999999999999999999999999999999999999999999999999998762 335
Q ss_pred CCCCCchHHHHHHHHHHcCCCCCCCC
Q 014696 272 SPYLALPLMSIVKIARECGWRNSDSL 297 (420)
Q Consensus 272 ~~~~~~pl~~~l~~a~~~g~~~~~~~ 297 (420)
+..+.+|+ ++|.+.|+.+++.+
T Consensus 220 d~~g~tpl----~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 220 DHMDRLPR----DIAQERMHHDIVRL 241 (253)
T ss_dssp CTTCCCHH----HHHHHTTCHHHHHH
T ss_pred ccCCCCHH----HHHHHcCCHHHHHH
Confidence 66777775 56777887766544
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.5e-35 Score=280.64 Aligned_cols=239 Identities=23% Similarity=0.252 Sum_probs=196.6
Q ss_pred cccccccCcccCC---CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Q 014696 2 KFLSIVGNSFGCS---ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDIN 78 (420)
Q Consensus 2 ~~l~~~g~~~~~~---~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~ 78 (420)
++|...|.+.-.. .+.||||.|+..|+.++|++|++++++++..+. .+.++++.++..++..++..+++.+++++
T Consensus 42 ~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (337)
T 4g8k_A 42 QQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK--NGATPFILAAIAGSVKLLKLFLSKGADVN 119 (337)
T ss_dssp HHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhcc--CCCchhHHHHhcccchhhHHhhhccchhh
Confidence 4555556554322 356899999999999999999999998877654 45899999999999999999999999999
Q ss_pred CccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccc---------CCCChHHHHHHHcCCHHHHHHHHHh-cCCCChhh
Q 014696 79 LRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADY---------LNGGTALHLAALNGHSRCIRLLLAD-YIPSVPNA 148 (420)
Q Consensus 79 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~---------~~g~tpL~~A~~~g~~~iv~~Ll~~-~~~~~~~~ 148 (420)
..|..|.||||+|+..|+.+++++|+++|++++.... ..|.||||+|+..|+.++|++|+++ +....
T Consensus 120 ~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n--- 196 (337)
T 4g8k_A 120 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN--- 196 (337)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT---
T ss_pred hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC---
Confidence 9999999999999999999999999999999875432 2589999999999999999999964 22111
Q ss_pred HHHHhhhccCCCCchhcccccchhhHHHHHHhc---CC-HHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHH
Q 014696 149 WNRLRKKSNKTGSILEFDERYFHLEVLLHLTLN---GH-VESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQ 224 (420)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~---g~-~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~ 224 (420)
.....+.+++++++.. +. ..++++|+++|++++ .++..|.||||+|+..|+.++++
T Consensus 197 -----------------~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n---~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 197 -----------------ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp -----------------CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT---CCCGGGCCHHHHHHHTTCHHHHH
T ss_pred -----------------ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHhhhhHHHH
Confidence 0112233344444322 22 457889999999998 67788999999999999999999
Q ss_pred HHHHh-CCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 225 ILIAM-GASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 225 ~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
+|++. |++++.+|.+|+||||+|+++|+.+++++|+++++.
T Consensus 257 ~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 257 RLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred HHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 99985 899999999999999999999999999999998875
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-36 Score=292.00 Aligned_cols=254 Identities=22% Similarity=0.172 Sum_probs=205.2
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHH--------HcCCCCCCccCCCC
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLI--------ESGVDINLRNYRGQ 85 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll--------~~g~~v~~~d~~g~ 85 (420)
..+.++||.|+..|+ +++++|+.. +++..+ ...|+||||+|+..|+.+++++|+ +.|+++|.+|..|.
T Consensus 92 ~~g~t~L~~Aa~~~~-~~~~~L~~~--~~n~~d-~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~ 167 (373)
T 2fo1_E 92 PESPIKLHTEAAGSY-AITEPITRE--SVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDEN 167 (373)
T ss_dssp --CCCHHHHHHHSSS-CCCSCCSTT--TTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSC
T ss_pred CCCccHHHHHhcCCc-hHHHHhccc--cccccC-CcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCC
Confidence 456789999999654 788877653 343333 245799999999999998888776 78999999999999
Q ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhc
Q 014696 86 TALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEF 165 (420)
Q Consensus 86 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
||||+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++. .....
T Consensus 168 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------~~~~~ 228 (373)
T 2fo1_E 168 TPLMLAVLARRRRLVAYLMKAGADPTIYNK-SERSALHQAAANRDFGMMVYMLNSTK------------------LKGDI 228 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHH------------------HHHTT
T ss_pred CHHHHHHHcChHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHhcCc------------------cccCh
Confidence 999999999999999999999999999886 99999999999999999999997530 00112
Q ss_pred ccccc-hhhHHHHHHhcC---CHHHHHHHHHcCCCcccc-----cccCCCCccHHHHHHHcCCHHHHHHHHHhC-CCccc
Q 014696 166 DERYF-HLEVLLHLTLNG---HVESVQLLLDLGASVSEY-----LSVSGAGSTSLHYAACGGNAQCCQILIAMG-ASLTA 235 (420)
Q Consensus 166 ~~~~~-~~~~~l~aa~~g---~~~~v~~Ll~~ga~~~~~-----~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~ 235 (420)
+..+. +.++++.|+..+ +.+++++|+++|++++.. ...+..|.||||+|+..|+.++|++|+++| ++++.
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~ 308 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK 308 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccC
Confidence 22233 334455557777 899999999999999842 125678999999999999999999999986 99999
Q ss_pred cccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCC
Q 014696 236 ENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDS 296 (420)
Q Consensus 236 ~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~ 296 (420)
+|..|+||||+|+..|+.+++++|+++++.. ...+..+.+|+ .+|...|+.+++.
T Consensus 309 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~--~~~d~~g~t~l----~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 309 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASV--EAVDATDHTAR----QLAQANNHHNIVD 363 (373)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS--SCCCSSSCCHH----HHHHHTTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc--cCCCCCCCCHH----HHHHHcCCHHHHH
Confidence 9999999999999999999999999998762 23466677775 4566666655543
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.9e-35 Score=265.03 Aligned_cols=212 Identities=28% Similarity=0.299 Sum_probs=183.6
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHH----cCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHH
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIE----SGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTAL 122 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~----~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL 122 (420)
.+..|+||||+|+..|+.+++++|++ .|.+++.+|..|.||||+|+..|+.+++++|+++|++++..+. .|.|||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l 83 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR-HGQTAA 83 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHH
Confidence 34567999999999999999999997 7999999999999999999999999999999999999999886 999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCccccc
Q 014696 123 HLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYL 201 (420)
Q Consensus 123 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~ 201 (420)
|+|+..|+.+++++|++.+... ....+..+ .+.+++..|+..|+.+++++|+++|++++
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~-----------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--- 143 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPG-----------------TLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID--- 143 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTT-----------------SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---
T ss_pred HHHHHcCCHHHHHHHHHcCCCc-----------------cccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc---
Confidence 9999999999999999875421 11112222 23445555699999999999999999999
Q ss_pred ccC-CCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHH
Q 014696 202 SVS-GAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLM 280 (420)
Q Consensus 202 ~~~-~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~ 280 (420)
..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++... ...+..+.+|++
T Consensus 144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~ 221 (241)
T 1k1a_A 144 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS--SLKNCHNDTPLM 221 (241)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT--TCCCTTSCCTTT
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCC--CCcCCCCCCHHH
Confidence 555 68999999999999999999999999999999999999999999999999999999998762 335667777775
Q ss_pred H
Q 014696 281 S 281 (420)
Q Consensus 281 ~ 281 (420)
.
T Consensus 222 ~ 222 (241)
T 1k1a_A 222 V 222 (241)
T ss_dssp T
T ss_pred H
Confidence 3
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=9.9e-35 Score=256.32 Aligned_cols=190 Identities=25% Similarity=0.322 Sum_probs=164.1
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCC-CcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNP-RLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
.+.++|+.|+..|+.+.++.|++.++ +++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVD--TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 34578999999999999999998876 554433 356899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHH-HcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchh
Q 014696 94 HGHWEVVLTLI-LYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHL 172 (420)
Q Consensus 94 ~g~~~iv~~Ll-~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
.|+.+++++|+ ..+++++..+. .|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~--------------------------------- 127 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNR-YGGNALIPAAEKGHIDNVKLLLE--------------------------------- 127 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCT-TSCCSHHHHHHTTCHHHHHHHHH---------------------------------
T ss_pred cCCHHHHHHHHhccCcccccccC-CCCcHHHHHHHcCCHHHHHHHHH---------------------------------
Confidence 99999999999 45668887775 88999999998888877777764
Q ss_pred hHHHHHHhcCCHHHHHHHHHcC-CCcccccccCCCCccHHHHHHHcCC-----HHHHHHHHHhCCCccccccCCCCHHHH
Q 014696 173 EVLLHLTLNGHVESVQLLLDLG-ASVSEYLSVSGAGSTSLHYAACGGN-----AQCCQILIAMGASLTAENANGWTPLMV 246 (420)
Q Consensus 173 ~~~l~aa~~g~~~~v~~Ll~~g-a~~~~~~~~~~~g~TpLh~Aa~~g~-----~~iv~~Ll~~gad~~~~d~~G~TpL~~ 246 (420)
+| ++++ ..+..|.||||+|+..++ .+++++|+++|++++.+|..|+||||+
T Consensus 128 --------------------~g~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 128 --------------------DGREDID---FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184 (201)
T ss_dssp --------------------HCCCCTT---CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred --------------------cCCCCcC---CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 44 5666 677889999999999998 999999999999999999999999999
Q ss_pred HHHcCchhHHHHhhhCC
Q 014696 247 ARSWHRTGLEDILSTQP 263 (420)
Q Consensus 247 A~~~g~~~i~~lL~~~~ 263 (420)
|++.|+.+++++|++++
T Consensus 185 A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 185 ANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTCHHHHHHHHTCC
T ss_pred HHHcCCHhHHHHHHhcC
Confidence 99999999999999864
No 32
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.3e-35 Score=265.48 Aligned_cols=204 Identities=24% Similarity=0.281 Sum_probs=128.9
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-----CccccCCCChHHHH
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANI-----HRADYLNGGTALHL 124 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-----~~~~~~~g~tpL~~ 124 (420)
|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++|+++ +..+. .|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHHH
Confidence 34555555555555555555554 5555555555555555555555555555555555544 22222 45555555
Q ss_pred HHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc-ccchhhHHHHHHhcCCHHHHHHHHHcCCCccccccc
Q 014696 125 AALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE-RYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSV 203 (420)
Q Consensus 125 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~ 203 (420)
|+..|+.+++++|++++............ ....+. ...+.++++.|+..|+.+++++|+++|++++ .+
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~ 150 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVF--------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR---AQ 150 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGG--------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT---CC
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcce--------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CC
Confidence 55555555555555554433221100000 000001 1122233333455566666777778899998 77
Q ss_pred CCCCccHHHHHHHcCCHHHH----HHHHHhCCCc------cccccCCCCHHHHHHHcCchhHHHHhhhCCCCc
Q 014696 204 SGAGSTSLHYAACGGNAQCC----QILIAMGASL------TAENANGWTPLMVARSWHRTGLEDILSTQPEGR 266 (420)
Q Consensus 204 ~~~g~TpLh~Aa~~g~~~iv----~~Ll~~gad~------~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~ 266 (420)
|..|.||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|++.|+.+++++|++++...
T Consensus 151 d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp CTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 88999999999999999988 9999999998 589999999999999999999999999987653
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.7e-36 Score=273.53 Aligned_cols=209 Identities=22% Similarity=0.258 Sum_probs=134.6
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCC----CCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGV----DINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~----~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+
T Consensus 8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 86 (236)
T 1ikn_D 8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNTPLHLAC 86 (236)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCCHHHHHH
T ss_pred CCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHH
Confidence 4555555555555555555554432 4555555555555555555555555555555555555543 5555555555
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc-hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF-HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSG 205 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~ 205 (420)
..|+.+++++|++.+..... ....+..+. +.++++.|+..|+.+++++|+++|++++ ..+.
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~---------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~ 148 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHL---------------HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN---AQEP 148 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSS---------------SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCT
T ss_pred HcCCHHHHHHHHhcccchhH---------------HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCC
Confidence 55555555555544321100 000111111 2223333355556666666677888888 6666
Q ss_pred -CCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCch
Q 014696 206 -AGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALP 278 (420)
Q Consensus 206 -~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~p 278 (420)
.|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+.+|+.+++++|+++++......++..+.+|
T Consensus 149 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 222 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES 222 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHH
Confidence 8999999999999999999999999999999999999999999999999999999999987766666555544
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.8e-35 Score=250.45 Aligned_cols=154 Identities=36% Similarity=0.532 Sum_probs=78.2
Q ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHH
Q 014696 54 PLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRC 133 (420)
Q Consensus 54 ~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~i 133 (420)
+|+.|+..|+.++|++|+++|+|+|.+|..|+||||+|+..++.+++++|+++|++++..+. .|+||||+|+..|+.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCHHH
Confidence 45555555555555555555555555555555555555555555555555555555555443 45555555554444443
Q ss_pred HHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHH
Q 014696 134 IRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHY 213 (420)
Q Consensus 134 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~ 213 (420)
+++|+ ++|++++ .+|..|+||||+
T Consensus 86 v~~Ll-----------------------------------------------------~~gadvn---~~d~~G~TpLh~ 109 (169)
T 4gpm_A 86 VKLLI-----------------------------------------------------SKGADVN---AKDSDGRTPLHH 109 (169)
T ss_dssp HHHHH-----------------------------------------------------HTTCCTT---CCCTTSCCHHHH
T ss_pred HHHHH-----------------------------------------------------HCcCCCC---CCCCCCCCHHHH
Confidence 33333 3344444 344455555555
Q ss_pred HHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 214 AACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 214 Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
|+..|+.++|++|+++|+|++.+|.+|+|||++|+++|+.+++++|+++++
T Consensus 110 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 110 AAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 555555555555555555555555555555555555555555555555544
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.4e-35 Score=273.59 Aligned_cols=238 Identities=17% Similarity=0.117 Sum_probs=192.7
Q ss_pred HHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHH
Q 014696 23 AARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLT 102 (420)
Q Consensus 23 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~ 102 (420)
+++..+.+.+..++..+ +++. .+..|+||||+|+..|+.+++++|+++|++++..+ |+||||+|+..|+.+++++
T Consensus 6 ~i~~~~~~~v~~lL~~~-~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~ 80 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK-DTFK--ADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKI 80 (285)
T ss_dssp TGGGCCHHHHHHHHHST-TTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHH
T ss_pred HHHhcCHHHHHHHHHhC-CCCc--cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHH
Confidence 35566777777777655 3443 44567999999999999999999999999999885 9999999999999999999
Q ss_pred HHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc-h-hhHHHHHHh
Q 014696 103 LILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF-H-LEVLLHLTL 180 (420)
Q Consensus 103 Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~l~aa~ 180 (420)
|+++|++++..+. .|.||||+|+..|+.+++++|++++.. .+..+. + .+++..|+.
T Consensus 81 Ll~~ga~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~---------------------~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 81 LLFSGLDDSQFDD-KGNTALYYAVDSGNMQTVKLFVKKNWR---------------------LMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp HHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCGG---------------------GGGCSSSGGGSHHHHHHH
T ss_pred HHHCCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHHHhcCCC---------------------CCccCCCCCCCHHHHHHH
Confidence 9999999999886 999999999999999999999987422 222222 3 355666699
Q ss_pred cCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCH-HHHHHHcCchhHHHHh
Q 014696 181 NGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTP-LMVARSWHRTGLEDIL 259 (420)
Q Consensus 181 ~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp-L~~A~~~g~~~i~~lL 259 (420)
.|+.+++++|+++|++... . ..|.||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.+++++|
T Consensus 139 ~~~~~~v~~Ll~~g~~~~~---~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~L 214 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPSTFD---L-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQAL 214 (285)
T ss_dssp TTCHHHHHHHHTTSCTTCC---C-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCcccc---c-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHH
Confidence 9999999999999988752 1 279999999999999999999999999999999999998 9999999999999999
Q ss_pred hhCCCCccccCCCCCCCchHHHHHHHHHHcCCC
Q 014696 260 STQPEGRLEVLPSPYLALPLMSIVKIARECGWR 292 (420)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~ 292 (420)
+++++..... ...........+++...+.|.+
T Consensus 215 l~~gad~~~~-~~~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 215 FKYDINIYSA-NLENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp TTSCBCSTTT-TGGGGTTTCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCC-ChhhhhcCCHHHHHHHHHcCCC
Confidence 9998763222 1111111123456666666543
No 36
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.8e-35 Score=284.37 Aligned_cols=232 Identities=20% Similarity=0.155 Sum_probs=185.1
Q ss_pred ccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHH
Q 014696 43 VRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTAL 122 (420)
Q Consensus 43 ~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL 122 (420)
+....+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++++. ..|.|||
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~g~t~L 88 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL---WHGQKPI 88 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---BTTBCHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---cCCCCHH
Confidence 3334455678999999999999999999999999999999999999999999999999999999997665 3799999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhhHHHHHHhcC--CHHHHHHHHHcCCCccc
Q 014696 123 HLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLEVLLHLTLNG--HVESVQLLLDLGASVSE 199 (420)
Q Consensus 123 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~aa~~g--~~~~v~~Ll~~ga~~~~ 199 (420)
|+|+..|+.+++++|++.+........................+..+ .+.++++.|+..| +.+++++|+++|++++
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~- 167 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT- 167 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT-
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc-
Confidence 99999999999999998732111111111111101111111112223 3344555569999 9999999999999999
Q ss_pred ccccCCCCccHHHHHHHcCCHHHHHHHHHhCCC-----ccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCC
Q 014696 200 YLSVSGAGSTSLHYAACGGNAQCCQILIAMGAS-----LTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPY 274 (420)
Q Consensus 200 ~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad-----~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~ 274 (420)
..+..|.||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+.+++++|++++... ...+..
T Consensus 168 --~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~--~~~d~~ 243 (364)
T 3ljn_A 168 --AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV--NMEDNE 243 (364)
T ss_dssp --CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT--TCCCTT
T ss_pred --ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCCCCC
Confidence 7788999999999999999999999999999 9999999999999999999999999999998763 345777
Q ss_pred CCchHHHH
Q 014696 275 LALPLMSI 282 (420)
Q Consensus 275 ~~~pl~~~ 282 (420)
+.+|++.+
T Consensus 244 g~tpL~~A 251 (364)
T 3ljn_A 244 HTVPLYLS 251 (364)
T ss_dssp SCCHHHHH
T ss_pred CCCHHHHH
Confidence 88887543
No 37
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-34 Score=248.73 Aligned_cols=160 Identities=37% Similarity=0.566 Sum_probs=143.4
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 17 GERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
+++|+.|++.|+.++|+.|++.+++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~--~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDS--DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 5789999999999999999999999887554 56899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL 176 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 176 (420)
.++|++|+++|++++.++. .|+||||+|+..|+.+++++|+
T Consensus 83 ~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~~g~~~~v~~Ll-------------------------------------- 123 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKEVVKLLI-------------------------------------- 123 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH--------------------------------------
T ss_pred HHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH--------------------------------------
Confidence 9999999999999999997 9999999999988877766665
Q ss_pred HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccc
Q 014696 177 HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTA 235 (420)
Q Consensus 177 ~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~ 235 (420)
++|++++ .+|..|.||||+|++.|+.+++++|+++||+++.
T Consensus 124 ---------------~~gad~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 124 ---------------SKGADVN---TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp ---------------HTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred ---------------HcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 5678888 7788999999999999999999999999999864
No 38
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.4e-34 Score=257.14 Aligned_cols=207 Identities=21% Similarity=0.228 Sum_probs=176.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCcHHHHHHHHHcC--CCCCc-cccCCCChHHHHHH
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINL-RNYRGQTALMQACQHGHWEVVLTLILYK--ANIHR-ADYLNGGTALHLAA 126 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~-~d~~g~TpL~~A~~~g~~~iv~~Ll~~g--a~~~~-~~~~~g~tpL~~A~ 126 (420)
|+||||+|+..|+.+++++|++.|.++.. .|..|.||||+|+..|+.+++++|+++| .+++. .+ ..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD-DSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCC-TTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCC-CCCCCHHHHHH
Confidence 68999999999999999999999888654 8999999999999999999999999999 55555 44 48999999999
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSG 205 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~ 205 (420)
..|+.+++++|++++... ..+..+ .+.+++..|+..|+.+++++|+++|++++ ..+.
T Consensus 81 ~~~~~~~~~~Ll~~g~~~-------------------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~ 138 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKP-------------------DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR---IKDK 138 (228)
T ss_dssp HHCCHHHHHHHHSSSSCC-------------------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCT
T ss_pred HcCCHHHHHHHHhCCCCc-------------------ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc---ccCC
Confidence 999999999999764211 111222 23445555699999999999999999999 7788
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHhC-CCccccccCCCCHHHHHHHcCchhHHHHhh-hCCCCccccCCCCCCCchHHHH
Q 014696 206 AGSTSLHYAACGGNAQCCQILIAMG-ASLTAENANGWTPLMVARSWHRTGLEDILS-TQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 206 ~g~TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~i~~lL~-~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
.|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ +.+... ...+..+.+|++.+
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~--~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY--DLVDNKGAKAEDVA 215 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS--CCBCTTSCBGGGGC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC--CccCCCCCcHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999 766652 23566777887543
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-34 Score=268.82 Aligned_cols=236 Identities=23% Similarity=0.242 Sum_probs=192.3
Q ss_pred HHHHHcCCHHHHHHHHHhCCCcccccC-------CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 21 VSAARDGDLQEAKALLEYNPRLVRYST-------FGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 21 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~~-------~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
+.+++.|..+.++.++.....+..... ...|.||||+|+..|+.++|++|+++|++++..|..|.||||+|+.
T Consensus 3 ~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACI 82 (299)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 357788888888888887655432211 1235699999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++.... ..+..+.
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~---------------------~~~~~g~ 140 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDN-EGWIPLHAAASCGYLDIAEYLISQGAHVG---------------------AVNSEGD 140 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------------------CCCTTSC
T ss_pred cCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCC---------------------CcCCCCC
Confidence 9999999999999999999986 99999999999999999999998754321 1122233
Q ss_pred HHHH-HHhcCCHHHHHHHHH-cCCCcccc-----------------------cccCCCCccHHHHHHHcCCHHHHHHHHH
Q 014696 174 VLLH-LTLNGHVESVQLLLD-LGASVSEY-----------------------LSVSGAGSTSLHYAACGGNAQCCQILIA 228 (420)
Q Consensus 174 ~~l~-aa~~g~~~~v~~Ll~-~ga~~~~~-----------------------~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~ 228 (420)
++++ |+..++.+++++|+. .|.+++.. ...+..|.||||+|+..|+.+++++|++
T Consensus 141 t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (299)
T 1s70_B 141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ 220 (299)
T ss_dssp CHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 3444 477777888776664 35544321 1345679999999999999999999999
Q ss_pred hCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHH
Q 014696 229 MGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLM 280 (420)
Q Consensus 229 ~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~ 280 (420)
+|++++.+|..|+||||+|+.+|+.+++++|++++... ...+..+.+|+.
T Consensus 221 ~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~--~~~d~~g~t~l~ 270 (299)
T 1s70_B 221 ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM--EAVNKVGQTAFD 270 (299)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--TCCCTTSCCTTT
T ss_pred cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC--CCcCCCCCCHHH
Confidence 99999999999999999999999999999999998762 335677777764
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1e-34 Score=266.52 Aligned_cols=198 Identities=22% Similarity=0.216 Sum_probs=164.5
Q ss_pred CCHHHHHHHHcCCHH----HHHHHHHhCCCccc--ccCCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCc------
Q 014696 16 SGERLVSAARDGDLQ----EAKALLEYNPRLVR--YSTFGVRNSPLHYSAAQ---GHHEIVSLLIESGVDINLR------ 80 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~----~v~~Ll~~~~~~~~--~~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~g~~v~~~------ 80 (420)
+.++||.|++.|+.+ ++++|++.+.+++. ...+..|+||||+|+.. |+.+++++|+++|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 347899999999997 55666678877765 11234568999999999 9999999999988777633
Q ss_pred -----cCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccC------------CCChHHHHHHHcCCHHHHHHHHHhcCC
Q 014696 81 -----NYRGQTALMQACQHGHWEVVLTLILYKANIHRADYL------------NGGTALHLAALNGHSRCIRLLLADYIP 143 (420)
Q Consensus 81 -----d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~------------~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 143 (420)
|..|+||||+|+..|+.+++++|+++|++++..+.. .|.||||+|+..|+.+++++|++++
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~-- 159 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP-- 159 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS--
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc--
Confidence 367999999999999999999999999999888752 1889999998888777666666310
Q ss_pred CChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHH--cCCHH
Q 014696 144 SVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAAC--GGNAQ 221 (420)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~--~g~~~ 221 (420)
.+|++++ .+|..|+||||+|+. .++.+
T Consensus 160 ------------------------------------------------~~ga~~n---~~d~~g~TpLh~A~~~~~~~~~ 188 (256)
T 2etb_A 160 ------------------------------------------------HQPASLE---ATDSLGNTVLHALVMIADNSPE 188 (256)
T ss_dssp ------------------------------------------------SCCCCTT---CCCTTSCCHHHHHHHHCCSCHH
T ss_pred ------------------------------------------------ccCCCcC---ccCCCCCCHHHHHHHcccCCch
Confidence 1688888 778899999999999 88988
Q ss_pred -------HHHHHHHhCCCc-------cccccCCCCHHHHHHHcCchhHHHHhhhCCCCc
Q 014696 222 -------CCQILIAMGASL-------TAENANGWTPLMVARSWHRTGLEDILSTQPEGR 266 (420)
Q Consensus 222 -------iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~ 266 (420)
++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++...
T Consensus 189 ~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 189 NSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999 999999999999999999999999999987653
No 41
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.8e-33 Score=252.47 Aligned_cols=207 Identities=25% Similarity=0.223 Sum_probs=182.3
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCC-CCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGV-DINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~-~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.++||||.|+..|+.+.+++|++.+. .++..|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 83 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASA 83 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHc
Confidence 35799999999999999999998764 4678899999999999999999999999999999999886 999999999999
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
|+.+++++|++++..... ....+.+++..|+..|+.+++++|+++|++++ ..+..|.
T Consensus 84 ~~~~~v~~Ll~~g~~~~~--------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~ 140 (231)
T 3aji_A 84 GXDEIVKALLVKGAHVNA--------------------VNQNGCTPLHYAASKNRHEIAVMLLEGGANPD---AKDHYDA 140 (231)
T ss_dssp TCHHHHHHHHHTTCCTTC--------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CHHHHHHHHHHcCCCCCC--------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCC
Confidence 999999999987543210 11223445566699999999999999999999 7788999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 209 TSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 209 TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++... ...+..+.+|+..+
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~~A 212 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASI--YIENKEEKTPLQVA 212 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCHHHHS
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998763 34577888887654
No 42
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.3e-34 Score=268.40 Aligned_cols=203 Identities=24% Similarity=0.294 Sum_probs=166.6
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHh----CCCcccc--cCCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCC-------
Q 014696 14 SASGERLVSAARDGDLQEAKALLEY----NPRLVRY--STFGVRNSPLHYSAAQ---GHHEIVSLLIESGVDI------- 77 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~----~~~~~~~--~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~g~~v------- 77 (420)
..+.++||.|++.|+.++|+.|++. +.+++.. ..+..|+||||+|+.. |+.++|++|+++|+++
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i 90 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV 90 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHh
Confidence 3556899999999999999998874 4443321 2345679999999987 9999999999987652
Q ss_pred CC----ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccc-------------CCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 78 NL----RNYRGQTALMQACQHGHWEVVLTLILYKANIHRADY-------------LNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 78 ~~----~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-------------~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
+. .|..|+||||+|+..|+.++|++|+++|++++..+. ..|.||||+|+..|+.+++++|++.
T Consensus 91 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 170 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN 170 (273)
T ss_dssp TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC
T ss_pred hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 22 567899999999999999999999999999998874 2588999999888877776666631
Q ss_pred cCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCC-
Q 014696 141 YIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGN- 219 (420)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~- 219 (420)
+ .+|++++ .+|..|.||||+|+..|+
T Consensus 171 ~--------------------------------------------------~~gad~~---~~d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 171 S--------------------------------------------------WQPADIS---ARDSVGNTVLHALVEVADN 197 (273)
T ss_dssp S--------------------------------------------------SCCCCTT---CCCTTSCCHHHHHHHHCCS
T ss_pred c--------------------------------------------------cCCCCce---eeCCCCCcHHHHHHHccCc
Confidence 0 0678888 778899999999999998
Q ss_pred --------HHHHHHHHHhCCCcc-------ccccCCCCHHHHHHHcCchhHHHHhhhCCCCcccc
Q 014696 220 --------AQCCQILIAMGASLT-------AENANGWTPLMVARSWHRTGLEDILSTQPEGRLEV 269 (420)
Q Consensus 220 --------~~iv~~Ll~~gad~~-------~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~ 269 (420)
.+++++|+++|++++ .+|..|+||||+|++.|+.+++++|+++++.+...
T Consensus 198 ~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred chhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 899999999999997 48999999999999999999999999998864433
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=266.21 Aligned_cols=207 Identities=22% Similarity=0.210 Sum_probs=153.5
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCC--------CCCccCCCCCHHHHHHHcCcH-HHHHHHHHcCCCCCccccCCCCh
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVD--------INLRNYRGQTALMQACQHGHW-EVVLTLILYKANIHRADYLNGGT 120 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~--------v~~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~~g~t 120 (420)
.+.++|+.|+..|+.++|++|++.|++ ++..+..|.|||++|+..+.. .++++|++.|++++..+. .|+|
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~-~G~T 88 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ-DGSS 88 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCT-TSCC
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC-CCCC
Confidence 346899999999999999999998875 466778899999999988876 488999999999999986 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccc
Q 014696 121 ALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEY 200 (420)
Q Consensus 121 pL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~ 200 (420)
|||+|+..|+.+++++|++.+..... ....+.+++..++..++.+++++|+++|++++
T Consensus 89 pLh~A~~~g~~~~v~~Ll~~~a~~~~--------------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-- 146 (269)
T 4b93_B 89 PLHVAALHGRADLIPLLLKHGANAGA--------------------RNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-- 146 (269)
T ss_dssp HHHHHHHTTCTTHHHHHHHTTCCTTC--------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC--
T ss_pred HHHHHHHcCcHHHHHHHHhcCCCcCc--------------------cCCCCCCccccccccChHHHHHHHHHCCCCCC--
Confidence 99999999999999999987543211 11223345555699999999999999999999
Q ss_pred cccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHH
Q 014696 201 LSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLM 280 (420)
Q Consensus 201 ~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~ 280 (420)
.+|..|.||||+|+..|+.++|++|+++|+|+|.++..|+||||+|+.+|+.+++++|+++++.. ...+..+.+|++
T Consensus 147 -~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~--~~~d~~G~TpL~ 223 (269)
T 4b93_B 147 -KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV--QVLNKRQRTAVD 223 (269)
T ss_dssp -CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS--CCCCTTSCCSGG
T ss_pred -CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC--CCcCCCCCCHHH
Confidence 77899999999999999999999999999999999999999999999999999999999998752 335778888886
Q ss_pred HH
Q 014696 281 SI 282 (420)
Q Consensus 281 ~~ 282 (420)
.+
T Consensus 224 ~A 225 (269)
T 4b93_B 224 CA 225 (269)
T ss_dssp GS
T ss_pred HH
Confidence 43
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=1.4e-34 Score=266.17 Aligned_cols=199 Identities=21% Similarity=0.239 Sum_probs=169.0
Q ss_pred CCHHHHHHHHcCCHHHHHHHHH----hCCCcccccC--CCCCCcHHHHHH---HcCcHHHHHHHHHcCCC----------
Q 014696 16 SGERLVSAARDGDLQEAKALLE----YNPRLVRYST--FGVRNSPLHYSA---AQGHHEIVSLLIESGVD---------- 76 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~----~~~~~~~~~~--~~~g~t~Lh~Aa---~~g~~~iv~~Ll~~g~~---------- 76 (420)
+.++||.|++.|+.+.++.|++ .+.+++.... +..|.||||+|+ ..|+.+++++|++.|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 3478999999999996555555 8888775542 356799999999 67999999999998744
Q ss_pred -CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcccc-------------CCCChHHHHHHHcCCHHHHHHHHHhcC
Q 014696 77 -INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADY-------------LNGGTALHLAALNGHSRCIRLLLADYI 142 (420)
Q Consensus 77 -v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~-------------~~g~tpL~~A~~~g~~~iv~~Ll~~~~ 142 (420)
++..|..|+||||+|+..|+.++|++|+++|++++..+. ..|.||||+|+..|+.+++++|++.+
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~- 163 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG- 163 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS-
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc-
Confidence 455566899999999999999999999999999999873 37999999999988887776666310
Q ss_pred CCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCC---
Q 014696 143 PSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGN--- 219 (420)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~--- 219 (420)
.+|++++ .+|..|.||||+|+..|+
T Consensus 164 -------------------------------------------------~~ga~~~---~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 164 -------------------------------------------------HKQADLR---RQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp -------------------------------------------------SCCCCTT---CCCTTSCCHHHHHHHHCCSSH
T ss_pred -------------------------------------------------ccCCCCc---ccCCCCCcHHHHHHHhccCch
Confidence 0678888 778899999999999888
Q ss_pred ------HHHHHHHHHhCCCc-------cccccCCCCHHHHHHHcCchhHHHHhhhCCCCcc
Q 014696 220 ------AQCCQILIAMGASL-------TAENANGWTPLMVARSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 220 ------~~iv~~Ll~~gad~-------~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~ 267 (420)
.+++++|+++|+++ +.+|..|+||||+|++.|+.+++++|++++....
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 79999999999999 6799999999999999999999999999877643
No 45
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.7e-32 Score=244.67 Aligned_cols=206 Identities=21% Similarity=0.168 Sum_probs=178.7
Q ss_pred cccccccCccc---CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CC
Q 014696 2 KFLSIVGNSFG---CSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGV-DI 77 (420)
Q Consensus 2 ~~l~~~g~~~~---~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~-~v 77 (420)
++|...|.+.- ...+.++||.|+..|+.+++++|++++++++..+. .|+||||+|+..|+.+++++|++++. ++
T Consensus 8 ~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 85 (223)
T 2f8y_A 8 SDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN--MGRTPLHAAVSADAQGVFQILIRNRATDL 85 (223)
T ss_dssp ETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHBTTSCT
T ss_pred HHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 34555555543 24567899999999999999999999988776544 55899999999999999999999987 89
Q ss_pred CCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhcc
Q 014696 78 NLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSN 157 (420)
Q Consensus 78 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 157 (420)
+..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++++....
T Consensus 86 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------------ 152 (223)
T 2f8y_A 86 DARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKD------------ 152 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTCHHHHHHHHHTTCCTT------------
T ss_pred ccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCC------------
Confidence 99999999999999999999999999999999999986 99999999999999999999998754321
Q ss_pred CCCCchhcccc-cchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcc
Q 014696 158 KTGSILEFDER-YFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLT 234 (420)
Q Consensus 158 ~~~~~~~~~~~-~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~ 234 (420)
.. ..+.+++..|+..|+.+++++|+++|++++ ..+..|.||||+|++.|+.+++++|+++|+...
T Consensus 153 ---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 153 ---------MQNNREETPLFLAAREGSYETAKVLLDHFANRD---ITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp ---------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred ---------CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc---cccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 12 223445556699999999999999999999 778899999999999999999999999998754
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=258.86 Aligned_cols=190 Identities=25% Similarity=0.294 Sum_probs=147.4
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCCCccCCCCCHHHHHH-----
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGV-DINLRNYRGQTALMQAC----- 92 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~-~v~~~d~~g~TpL~~A~----- 92 (420)
+++.|+..|+++.++.+++...+......+..|+||||+|+..|+.++|++|++.|+ +++..|..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~ 158 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLK 158 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhh
Confidence 456677777777777776665443333344456777777777777777777777776 77777777777777777
Q ss_pred HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchh
Q 014696 93 QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHL 172 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
..++.+++++|++.|.+++..+. .|+||||+|+..|+.++++
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~-~g~tpLh~A~~~g~~~~v~------------------------------------- 200 (276)
T 4hbd_A 159 TQDDIETVLQLFRLGNINAKASQ-AGQTALMLAVSHGRVDVVK------------------------------------- 200 (276)
T ss_dssp SHHHHHHHHHHHHHSCTTCCCTT-TCCCHHHHHHHTTCHHHHH-------------------------------------
T ss_pred hhhhHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHH-------------------------------------
Confidence 55677777777777766666654 6777777777766665554
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHH-hCCCccccccCCCCHHHHHHHcC
Q 014696 173 EVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIA-MGASLTAENANGWTPLMVARSWH 251 (420)
Q Consensus 173 ~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~g 251 (420)
+|+++|++++ .+|..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|
T Consensus 201 ----------------~Ll~~gad~n---~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 201 ----------------ALLACEADVN---VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp ----------------HHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ----------------HHHhCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcC
Confidence 4556788888 778899999999999999999999999 89999999999999999999999
Q ss_pred chhHHHHhhhCCCC
Q 014696 252 RTGLEDILSTQPEG 265 (420)
Q Consensus 252 ~~~i~~lL~~~~~~ 265 (420)
+.+++++|+++...
T Consensus 262 ~~~iv~~Ll~~~~i 275 (276)
T 4hbd_A 262 QSEIASMLYSRMNI 275 (276)
T ss_dssp CHHHHHHHHHHCCC
T ss_pred CHHHHHHHHhccCC
Confidence 99999999987653
No 47
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.5e-32 Score=243.90 Aligned_cols=217 Identities=18% Similarity=0.084 Sum_probs=185.0
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 49 GVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 49 ~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
..|.|+||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++......|.||||+|+..
T Consensus 7 ~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 7 DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp CGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred cccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 35689999999999999999999999999999999999999999999999999999999999987765799999999999
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
|+.+++++|++.+..... ....+.+++..|+..|+.+++++|+++|++++ ..+..|.
T Consensus 87 ~~~~~v~~Ll~~g~~~~~--------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~---~~~~~g~ 143 (240)
T 3eu9_A 87 GHLSMVVQLMKYGADPSL--------------------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD---MMDQNGM 143 (240)
T ss_dssp TCHHHHHHHHHTTCCTTC--------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CCHHHHHHHHHcCCCCcc--------------------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc---ccCCCCC
Confidence 999999999987543211 11223345556699999999999999999999 7788999
Q ss_pred cHHHHHHHcCC-HHHHHHHHHhCCCcccccc-CCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHH
Q 014696 209 TSLHYAACGGN-AQCCQILIAMGASLTAENA-NGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIA 286 (420)
Q Consensus 209 TpLh~Aa~~g~-~~iv~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a 286 (420)
||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.+++++|++++... ...+..+.+|+. +|
T Consensus 144 t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~g~t~l~----~A 217 (240)
T 3eu9_A 144 TPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV--DAQNIKGESALD----LA 217 (240)
T ss_dssp CHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT--TCBCTTSCBHHH----HH
T ss_pred cHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC--CCcCCCCCCHHH----HH
Confidence 99999997666 8999999999999999987 9999999999999999999999997652 234566777764 44
Q ss_pred HHcCCCCC
Q 014696 287 RECGWRNS 294 (420)
Q Consensus 287 ~~~g~~~~ 294 (420)
.+.|..++
T Consensus 218 ~~~~~~~~ 225 (240)
T 3eu9_A 218 KQRKNVWM 225 (240)
T ss_dssp HHTTCHHH
T ss_pred HHcCcHHH
Confidence 44444433
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=1.1e-31 Score=229.93 Aligned_cols=159 Identities=28% Similarity=0.370 Sum_probs=143.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
.|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 468999999999999999999999999999999999999999999999999999999999998886 8999999999888
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ ..+..|.|
T Consensus 81 ~~~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t 104 (167)
T 3v31_A 81 YTDIVKMLL-----------------------------------------------------DCGVDVN---EYDWNGGT 104 (167)
T ss_dssp CHHHHHHHH-----------------------------------------------------HHTCCTT---CCCTTSCC
T ss_pred CHHHHHHHH-----------------------------------------------------HCCCCCC---cCCCCCCC
Confidence 877766666 4567777 66788999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+++...
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887543
No 49
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=4e-32 Score=238.16 Aligned_cols=160 Identities=24% Similarity=0.331 Sum_probs=148.4
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
.+..|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHH
Confidence 345679999999999999999999999999999999999999999999999999999999999999986 9999999999
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGA 206 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~ 206 (420)
..|+.+++++|+ ++|++++ ..+..
T Consensus 110 ~~~~~~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~ 133 (192)
T 2rfm_A 110 IFGYSEMSYFLL-----------------------------------------------------EHGANVN---DRNLE 133 (192)
T ss_dssp HHTCHHHHHHHH-----------------------------------------------------HTTCCSS---CCCTT
T ss_pred HcCCHHHHHHHH-----------------------------------------------------HCCCCCC---CCCCC
Confidence 988887766665 5677787 67889
Q ss_pred CccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 207 GSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 207 g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
|.||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|++.+
T Consensus 134 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 134 GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999998753
No 50
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=3.3e-31 Score=239.18 Aligned_cols=190 Identities=24% Similarity=0.266 Sum_probs=153.8
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHHc-CCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCC
Q 014696 83 RGQTALMQACQHGHWEVVLTLILY-KANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGS 161 (420)
Q Consensus 83 ~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 161 (420)
.|+||||+|+..|+.+++++|++. |++++..+. .|+||||+|+..|+.+++++|++.+....
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------------- 64 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGA-MGETALHIAALYDNLEAAMVLMEAAPELV---------------- 64 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHCGGGG----------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHcCchhc----------------
Confidence 489999999999999999999998 999999986 99999999999999999999998743211
Q ss_pred chhccccc-chhhHHHHHHhcCCHHHHHHHHHcCCCcccccc----------cCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 162 ILEFDERY-FHLEVLLHLTLNGHVESVQLLLDLGASVSEYLS----------VSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 162 ~~~~~~~~-~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~----------~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
....+..+ .+.++++.|+..|+.+++++|+++|++++.... .+..|.||||+|+..|+.+++++|+++|
T Consensus 65 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 144 (232)
T 2rfa_A 65 FEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG 144 (232)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT
T ss_pred cccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 00011122 344556666999999999999999999984311 1237999999999999999999999999
Q ss_pred CCccccccCCCCHHHHHHHcCchhHH----HHhhhCCCCccc----cCCCCCCCchHHHHHHHHHHcCCCC
Q 014696 231 ASLTAENANGWTPLMVARSWHRTGLE----DILSTQPEGRLE----VLPSPYLALPLMSIVKIARECGWRN 293 (420)
Q Consensus 231 ad~~~~d~~G~TpL~~A~~~g~~~i~----~lL~~~~~~~~~----~~~~~~~~~pl~~~l~~a~~~g~~~ 293 (420)
++++.+|..|+||||+|+..|+.+++ ++|++.++.... ...+..+.+|++. |.+.|..+
T Consensus 145 a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~----A~~~g~~~ 211 (232)
T 2rfa_A 145 ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKL----AGVEGNIV 211 (232)
T ss_dssp CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHH----HHHHTCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHH----HHHcCCHH
Confidence 99999999999999999999999988 999999886421 2456778888654 44444443
No 51
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=3e-31 Score=227.77 Aligned_cols=157 Identities=31% Similarity=0.406 Sum_probs=142.7
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
.+.++|++|+..|+.++|++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAALFG 91 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcC
Confidence 446899999999999999999999999999999999999999999999999999999999998886 8999999999988
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ ..+..|.|
T Consensus 92 ~~~~~~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t 115 (169)
T 2y1l_E 92 HLEIVEVLL-----------------------------------------------------KNGADVN---ANDMEGHT 115 (169)
T ss_dssp CHHHHHHHH-----------------------------------------------------HTTCCTT---CCCTTSCC
T ss_pred CHHHHHHHH-----------------------------------------------------HcCCCCC---CCCCCCCC
Confidence 877766666 4567777 66788999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|++.|+.+++++|++.+
T Consensus 116 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 116 PLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999998764
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.1e-32 Score=260.49 Aligned_cols=220 Identities=17% Similarity=0.154 Sum_probs=163.2
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc--
Q 014696 19 RLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH-- 96 (420)
Q Consensus 19 ~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~-- 96 (420)
.++.|+..+..++++.|++.+.+++.. .+..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.+|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~-~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIP-VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSC-CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence 347777788889999999999888772 23356999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcC-CCCCccccCCCChHHHHHHH----cCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccc
Q 014696 97 -WEVVLTLILYK-ANIHRADYLNGGTALHLAAL----NGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYF 170 (420)
Q Consensus 97 -~~iv~~Ll~~g-a~~~~~~~~~g~tpL~~A~~----~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (420)
.++++.|++++ ++++..+. .|+||||+|+. .|+.+++++|++.+......... ..............+..+.
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~-~~i~~~~~~~g~~~~~~~~ 256 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN-RPIQSGTNEKESKPNDKNG 256 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECT-TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG-CCEEEC-------------
T ss_pred cHHHHHHHHHhhhccccCCCC-CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc-hHHHhhhhcccCCcccccc
Confidence 78888998886 77888886 99999999999 89999999999763210000000 0000000001222333444
Q ss_pred hhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc
Q 014696 171 HLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 171 ~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 250 (420)
.+.++++.+.. +++|+++ +++ .++..|+||||+|++.|+.++|++|+++|+|++.+|..|+||||+|+++
T Consensus 257 ~g~t~L~~a~~-----~~~Ll~~--~~n---~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 257 ERKDSILENLD-----LKWIIAN--MLN---AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ---CHHHHHCS-----HHHHHHH--TTT---CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred cCCChhHHHHH-----HHHHHHh--CCC---CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 55566666443 8999988 466 6688899999999999999999999999999999999999999999876
Q ss_pred C
Q 014696 251 H 251 (420)
Q Consensus 251 g 251 (420)
|
T Consensus 327 g 327 (327)
T 1sw6_A 327 E 327 (327)
T ss_dssp -
T ss_pred C
Confidence 4
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.4e-31 Score=228.84 Aligned_cols=169 Identities=27% Similarity=0.331 Sum_probs=121.6
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 17 GERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
+++|+.|+..|+.+.+++|++.++.... ..+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVN-KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGG-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCccccc-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 3568888888888888888877765221 223455788888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL 176 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 176 (420)
.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll-------------------------------------- 122 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDW-NGGTPLLYAVRGNHVKCVEALL-------------------------------------- 122 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH--------------------------------------
T ss_pred HHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH--------------------------------------
Confidence 8888888888888877775 7888888887776666555554
Q ss_pred HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCH
Q 014696 177 HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTP 243 (420)
Q Consensus 177 ~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~Tp 243 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|+++..++..|.||
T Consensus 123 ---------------~~ga~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 123 ---------------ARGADLT---TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp ---------------HTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred ---------------HcCCCcc---ccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 4566666 566778888888888888888888888888777777777766
No 54
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.8e-31 Score=225.11 Aligned_cols=155 Identities=28% Similarity=0.343 Sum_probs=121.1
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCH
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHS 131 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~ 131 (420)
.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++..+. .|.||||+|+..|+.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR-TGFAVIHDAARAGFL 83 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCH
Confidence 478888888888888888888888888888888888888877 888888888888888877775 788888888877776
Q ss_pred HHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHH
Q 014696 132 RCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSL 211 (420)
Q Consensus 132 ~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpL 211 (420)
+++++|+ ++|++++ ..+..|.|||
T Consensus 84 ~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t~L 107 (162)
T 1ihb_A 84 DTLQTLL-----------------------------------------------------EFQADVN---IEDNEGNLPL 107 (162)
T ss_dssp HHHHHHH-----------------------------------------------------HTTCCTT---CCCTTSCCHH
T ss_pred HHHHHHH-----------------------------------------------------HcCCCCC---CcCCCCCCHH
Confidence 6655555 4556666 5667788888
Q ss_pred HHHHHcCCHHHHHHHHHhCCC-ccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 212 HYAACGGNAQCCQILIAMGAS-LTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 212 h~Aa~~g~~~iv~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
|+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.+|+.+++++|+++++
T Consensus 108 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 108 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 888888888888888888877 47788888888888888888888888887765
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=5e-31 Score=226.91 Aligned_cols=157 Identities=28% Similarity=0.398 Sum_probs=145.8
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVD-INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~-v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCCC
Confidence 6899999999999999999999887 899999999999999999999999999999999999986 89999999999988
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS 210 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp 210 (420)
.+++++|+ ++|++++ ..+..|.||
T Consensus 82 ~~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t~ 105 (172)
T 3v30_A 82 TDIVGLLL-----------------------------------------------------ERDVDIN---IYDWNGGTP 105 (172)
T ss_dssp HHHHHHHH-----------------------------------------------------TTTCCTT---CCCTTSCCH
T ss_pred HHHHHHHH-----------------------------------------------------HcCCCCC---CCCCCCCCH
Confidence 87776666 4567777 677899999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCC
Q 014696 211 LHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 211 Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~ 265 (420)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++..
T Consensus 106 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988765
No 56
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2e-30 Score=218.77 Aligned_cols=151 Identities=25% Similarity=0.347 Sum_probs=123.9
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCH
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHS 131 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~ 131 (420)
.|+||.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcChH
Confidence 478888888888888888888888776 477788888888888888888888888888887775 788888888877776
Q ss_pred HHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHH
Q 014696 132 RCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSL 211 (420)
Q Consensus 132 ~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpL 211 (420)
+++++|+ ++|++++ ..+..|.|||
T Consensus 81 ~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t~L 104 (153)
T 1awc_B 81 NIVEVLL-----------------------------------------------------KHGADVN---AKDMLKMTAL 104 (153)
T ss_dssp HHHHHHH-----------------------------------------------------TTTCCTT---CCCTTSCCHH
T ss_pred HHHHHHH-----------------------------------------------------HcCCCCC---CCCCCCCCHH
Confidence 6655555 4566666 5677888999
Q ss_pred HHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhh
Q 014696 212 HYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILS 260 (420)
Q Consensus 212 h~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~ 260 (420)
|+|+..|+.+++++|+++|++++.+|..|+|||++|+.+|+.+++++|.
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 9999999999999999999999888888999999999999998888873
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3e-31 Score=252.46 Aligned_cols=222 Identities=18% Similarity=0.100 Sum_probs=167.2
Q ss_pred CCHHHHHHHHHhCCCccccc---------------CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCC-ccCCCCCHHHH
Q 014696 27 GDLQEAKALLEYNPRLVRYS---------------TFGVRNSPLHYSAAQGHHEIVSLLIESGVDINL-RNYRGQTALMQ 90 (420)
Q Consensus 27 g~~~~v~~Ll~~~~~~~~~~---------------~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~-~d~~g~TpL~~ 90 (420)
|+.++|+.|++++.+.+... ......+.+|+|+..+..+++++|++.|+++|. +|..|+||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 99999999999985543210 001112346888999999999999999999999 89999999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC---HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc
Q 014696 91 ACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH---SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE 167 (420)
Q Consensus 91 A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~---~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
|+..|+.++|++|+++|++++..+. .|+||||+|+..|+ .++++.|++.+. ...+.
T Consensus 138 Aa~~g~~~~v~~Ll~~Gad~n~~d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~--------------------~~~~~ 196 (327)
T 1sw6_A 138 LTSIANLELVKHLVKHGSNRLYGDN-MGESCLVKAVKSVNNYDSGTFEALLDYLY--------------------PCLIL 196 (327)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTBCCT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHG--------------------GGGGE
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhcccccHHHHHHHHHhhh--------------------ccccC
Confidence 9999999999999999999999986 99999999999998 677777776531 11233
Q ss_pred ccchhhHHHH-HHh----cCCHHHHHHHHHc--------------------CCCcccccccCCCCccHHHHHHHcCCHHH
Q 014696 168 RYFHLEVLLH-LTL----NGHVESVQLLLDL--------------------GASVSEYLSVSGAGSTSLHYAACGGNAQC 222 (420)
Q Consensus 168 ~~~~~~~~l~-aa~----~g~~~~v~~Ll~~--------------------ga~~~~~~~~~~~g~TpLh~Aa~~g~~~i 222 (420)
.+..+.+++| |+. .|+.+++++|++. |++++ ..+..|.||||+|+.
T Consensus 197 ~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~---~~~~~g~t~L~~a~~------ 267 (327)
T 1sw6_A 197 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN---DKNGERKDSILENLD------ 267 (327)
T ss_dssp ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------------CHHHHHCS------
T ss_pred CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcc---cccccCCChhHHHHH------
Confidence 3334445555 566 8999999999987 88888 778899999999985
Q ss_pred HHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 223 CQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 223 v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
+++|+++ +++.+|..|+||||+|+.+|+.+++++|+++++. ....+..+.+|++.+
T Consensus 268 ~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad--~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 268 LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD--PFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC--TTCCCTTSCCGGGGT
T ss_pred HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHH
Confidence 9999999 6888999999999999999999999999999876 334577888888643
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.2e-30 Score=219.37 Aligned_cols=157 Identities=29% Similarity=0.421 Sum_probs=141.0
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
..++|+.|+..|+.+++++|++.+.+++..+. .|+||||+|+. |+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNG--FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCT--TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCc--cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 45899999999999999999999988766544 56899999999 9999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHH
Q 014696 96 HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVL 175 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (420)
+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~------------------------------------ 124 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDN-EGNLPLHLAAKEGHLRVVEFLVK------------------------------------ 124 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHH------------------------------------
T ss_pred CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHH------------------------------------
Confidence 99999999999999999986 99999999999998888777775
Q ss_pred HHHHhcCCHHHHHHHHHcCCC-cccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCC
Q 014696 176 LHLTLNGHVESVQLLLDLGAS-VSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGAS 232 (420)
Q Consensus 176 l~aa~~g~~~~v~~Ll~~ga~-~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad 232 (420)
+|++ ++ ..+..|.||||+|+..|+.+++++|+++|||
T Consensus 125 -----------------~g~~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 125 -----------------HTASNVG---HRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp -----------------HSCCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred -----------------ccCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 4444 34 5677899999999999999999999999986
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.5e-29 Score=221.64 Aligned_cols=183 Identities=17% Similarity=0.210 Sum_probs=160.2
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCC-CCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGV-DINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~-~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.+.||||+|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 82 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAGAQ 82 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 45799999999999999999999866 9999999999999999999999999999999999999886 999999999999
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
|+.+++++|+++ .+++++ ..+..|.
T Consensus 83 ~~~~~~~~Ll~~----------------------------------------------------~~~~~~---~~~~~g~ 107 (201)
T 3hra_A 83 GRTEILAYMLKH----------------------------------------------------ATPDLN---KHNRYGG 107 (201)
T ss_dssp TCHHHHHHHHHH----------------------------------------------------SCCCTT---CCCTTSC
T ss_pred CCHHHHHHHHhc----------------------------------------------------cCcccc---cccCCCC
Confidence 999988888853 344555 6677899
Q ss_pred cHHHHHHHcCCHHHHHHHHHhC-CCccccccCCCCHHHHHHHcCc-----hhHHHHhhhCCCCccccCCCCCCCchHHHH
Q 014696 209 TSLHYAACGGNAQCCQILIAMG-ASLTAENANGWTPLMVARSWHR-----TGLEDILSTQPEGRLEVLPSPYLALPLMSI 282 (420)
Q Consensus 209 TpLh~Aa~~g~~~iv~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~-----~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~ 282 (420)
||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|++++... ...+..+.+|+.
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~--~~~~~~g~t~l~-- 183 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ--SIKDNSGRTAMD-- 183 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT--TCCCTTSCCHHH--
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC--CccCCCCCCHHH--
Confidence 9999999999999999999999 9999999999999999999988 89999999998763 335667777765
Q ss_pred HHHHHHcCCCCC
Q 014696 283 VKIARECGWRNS 294 (420)
Q Consensus 283 l~~a~~~g~~~~ 294 (420)
+|...|..++
T Consensus 184 --~A~~~~~~~~ 193 (201)
T 3hra_A 184 --YANQKGYTEI 193 (201)
T ss_dssp --HHHHHTCHHH
T ss_pred --HHHHcCCHhH
Confidence 4455554443
No 60
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.3e-30 Score=236.12 Aligned_cols=197 Identities=19% Similarity=0.148 Sum_probs=155.6
Q ss_pred CCccCCCCCHHHHHHHcCcHHHHHHHHHcCC----CCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHh
Q 014696 78 NLRNYRGQTALMQACQHGHWEVVLTLILYKA----NIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLR 153 (420)
Q Consensus 78 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga----~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 153 (420)
+.+|.+|.||||+|+..|+.+++++|++.+. +++..+. .|.||||+|+..|+.+++++|++++.....
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 73 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPEIAEALLGAGCDPEL------- 73 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT-TCCCHHHHHHHTTCHHHHHCCCSCCCCSCC-------
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------
Confidence 3568899999999999999999999998765 6888876 899999999999999999999976533211
Q ss_pred hhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCccc---ccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 154 KKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSE---YLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~---~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
....+.++++.|+..|+.+++++|+++|++.+. ....+..|.||||+|+..|+.+++++|+++|
T Consensus 74 -------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 140 (236)
T 1ikn_D 74 -------------RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG 140 (236)
T ss_dssp -------------CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred -------------cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 112234455566999999999999999986321 1266778999999999999999999999999
Q ss_pred CCcccccc-CCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHH--------HHHHHHHHcCCCCCCCC
Q 014696 231 ASLTAENA-NGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLM--------SIVKIARECGWRNSDSL 297 (420)
Q Consensus 231 ad~~~~d~-~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~--------~~l~~a~~~g~~~~~~~ 297 (420)
++++.++. .|+||||+|+..|+.+++++|++++... ...+..+.+|++ .++++..+.|.......
T Consensus 141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 214 (236)
T 1ikn_D 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV--NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQML 214 (236)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS--CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcC
Confidence 99999998 9999999999999999999999997762 234667777763 45677777777655433
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.7e-29 Score=216.81 Aligned_cols=158 Identities=34% Similarity=0.493 Sum_probs=142.8
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++|+.|++.|+.++|++|++++.+++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDA--SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 3556799999999999999999999988876544 56899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll----------------------------------- 133 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDM-EGHTPLHLAAMFGHLEIVEVLL----------------------------------- 133 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH-----------------------------------
T ss_pred cCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH-----------------------------------
Confidence 9999999999999999999986 8999999999988887766666
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|
T Consensus 134 ------------------~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 134 ------------------KNGADVN---AQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ------------------HTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ------------------HcCCCCC---CcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 5677777 67889999999999999999999999876
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=7.8e-30 Score=218.30 Aligned_cols=161 Identities=25% Similarity=0.381 Sum_probs=145.8
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++||.|+..|+.+++++|++.+.+++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDE--EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCC--CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 456899999999999999999999988766544 568999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEV 174 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll------------------------------------ 122 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDVNEYDW-NGGTPLLYAVHGNHVKCVKMLL------------------------------------ 122 (167)
T ss_dssp TCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH------------------------------------
T ss_pred CCHHHHHHHHHCCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHH------------------------------------
Confidence 999999999999999999986 9999999999988877766665
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcc
Q 014696 175 LLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLT 234 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~ 234 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++++++.
T Consensus 123 -----------------~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 123 -----------------ESGADPT---IETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp -----------------HTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred -----------------HcCCCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 5677777 678899999999999999999999999876653
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2e-30 Score=221.56 Aligned_cols=156 Identities=30% Similarity=0.338 Sum_probs=99.4
Q ss_pred CCcHHHHHHHcCcHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIE-SGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~-~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
|.|+||.|+..|+.+++++|++ .+.+++..+..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 86 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHcC
Confidence 3566666666666666666665 3455555666666666666666666666666666666666664 6666666666665
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ ..+..|.|
T Consensus 87 ~~~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t 110 (165)
T 3twr_A 87 HYEVAELLV-----------------------------------------------------KHGAVVN---VADLWKFT 110 (165)
T ss_dssp CHHHHHHHH-----------------------------------------------------HTTCCTT---CCCTTCCC
T ss_pred cHHHHHHHH-----------------------------------------------------hCCCCCC---CcCCCCCC
Confidence 555544444 3445555 45556677
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|++ ++.+++++|+++++
T Consensus 111 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 111 PLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 7777777777777777777777777777777777777655 66677777766553
No 64
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3e-30 Score=239.00 Aligned_cols=185 Identities=19% Similarity=0.214 Sum_probs=145.7
Q ss_pred CCCCHHHHHHHHc---CCHHHHHHHHHhCCCc-------c--cccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc
Q 014696 14 SASGERLVSAARD---GDLQEAKALLEYNPRL-------V--RYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN 81 (420)
Q Consensus 14 ~~~~~~L~~Aa~~---g~~~~v~~Ll~~~~~~-------~--~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d 81 (420)
..+.++||.|+.. |+.++|++|++.+++. + ....+..|.||||+|+..|+.++|++|+++|++++.++
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 131 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccc
Confidence 4677899999987 9999999999987542 1 12234567999999999999999999999999999998
Q ss_pred C--------------CCCCHHHHHHHcCcHHHHHHHHH---cCCCCCccccCCCChHHHHHHHcCC--HHHHHHHHHhcC
Q 014696 82 Y--------------RGQTALMQACQHGHWEVVLTLIL---YKANIHRADYLNGGTALHLAALNGH--SRCIRLLLADYI 142 (420)
Q Consensus 82 ~--------------~g~TpL~~A~~~g~~~iv~~Ll~---~ga~~~~~~~~~g~tpL~~A~~~g~--~~iv~~Ll~~~~ 142 (420)
. .|+||||+|+..|+.+++++|++ +|++++..+. .|+||||+|+..|+ .+..+++.
T Consensus 132 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~~~~~~~~~~~~~~~---- 206 (273)
T 2pnn_A 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDS-VGNTVLHALVEVADNTVDNTKFVT---- 206 (273)
T ss_dssp CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSCHHHHHHHH----
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCC-CCCcHHHHHHHccCcchhHHHHHH----
Confidence 7 79999999999999999999999 9999999997 99999999999877 33333332
Q ss_pred CCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccc----cccCCCCccHHHHHHHcC
Q 014696 143 PSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEY----LSVSGAGSTSLHYAACGG 218 (420)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~----~~~~~~g~TpLh~Aa~~g 218 (420)
+++++|+++|++++.. ...+..|.||||+|++.|
T Consensus 207 ------------------------------------------~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 207 ------------------------------------------SMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp ------------------------------------------HHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred ------------------------------------------HHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 4577777888777621 146889999999999999
Q ss_pred CHHHHHHHHHhCC-CccccccCCCCHHH
Q 014696 219 NAQCCQILIAMGA-SLTAENANGWTPLM 245 (420)
Q Consensus 219 ~~~iv~~Ll~~ga-d~~~~d~~G~TpL~ 245 (420)
+.+++++|+++|+ |+......+++|-+
T Consensus 245 ~~~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 245 KIGVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp CHHHHHHHHHHHTC--------------
T ss_pred hHHHHHHHHHCCCCCchhhhhhhhhccC
Confidence 9999999999999 88887777777643
No 65
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.4e-30 Score=237.23 Aligned_cols=188 Identities=21% Similarity=0.212 Sum_probs=153.2
Q ss_pred CCCcHHHHHHHcCcHH----HHHHHHHcCCCCCC----ccCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCCccc----
Q 014696 50 VRNSPLHYSAAQGHHE----IVSLLIESGVDINL----RNYRGQTALMQACQH---GHWEVVLTLILYKANIHRAD---- 114 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~----iv~~Ll~~g~~v~~----~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~~~~~~---- 114 (420)
+|+||||+|+..|+.+ ++++|+++|++++. +|..|+||||+|+.. |+.++|++|+++|++++..+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4689999999999997 66778889999998 899999999999999 99999999999998876433
Q ss_pred ------cCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHH
Q 014696 115 ------YLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQ 188 (420)
Q Consensus 115 ------~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~ 188 (420)
+..|.||||+|+..|+.+++++|++++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g----------------------------------------------- 113 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG----------------------------------------------- 113 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-----------------------------------------------
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcC-----------------------------------------------
Confidence 137999999999999988888887653
Q ss_pred HHHHcCCCccccc----------ccCCCCccHHHHHHHcCCHHHHHHHHH---hCCCccccccCCCCHHHHHHH--cCch
Q 014696 189 LLLDLGASVSEYL----------SVSGAGSTSLHYAACGGNAQCCQILIA---MGASLTAENANGWTPLMVARS--WHRT 253 (420)
Q Consensus 189 ~Ll~~ga~~~~~~----------~~~~~g~TpLh~Aa~~g~~~iv~~Ll~---~gad~~~~d~~G~TpL~~A~~--~g~~ 253 (420)
++++... ..+..|.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.
T Consensus 114 ------a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 114 ------ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp ------CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred ------CCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 3433110 122349999999999999999999999 999999999999999999999 7888
Q ss_pred h-------HHHHhhhCCCCccc-----cCCCCCCCchHHHHHHHHHHcCCCCC
Q 014696 254 G-------LEDILSTQPEGRLE-----VLPSPYLALPLMSIVKIARECGWRNS 294 (420)
Q Consensus 254 ~-------i~~lL~~~~~~~~~-----~~~~~~~~~pl~~~l~~a~~~g~~~~ 294 (420)
+ ++++|+++++.... ...+..+.+|++ +|.+.|..++
T Consensus 188 ~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~----~A~~~g~~~~ 236 (256)
T 2etb_A 188 ENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK----LAAKEGKIEI 236 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH----HHHHTTCHHH
T ss_pred hhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH----HHHHhCCHHH
Confidence 8 99999998766321 345677888765 4555554433
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=1e-29 Score=215.01 Aligned_cols=152 Identities=29% Similarity=0.356 Sum_probs=116.3
Q ss_pred CcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 52 NSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
.||||+|+..|+.+++++|++. +.+++..|..|+||||+ +..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCc
Confidence 4778888888888888888777 44777777778888888 777888888888888888777775 77888888877776
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS 210 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp 210 (420)
.+++++|+ ++|++++ ..+..|.||
T Consensus 81 ~~~v~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t~ 104 (156)
T 1bd8_A 81 LDTLKVLV-----------------------------------------------------EHGADVN---VPDGTGALP 104 (156)
T ss_dssp HHHHHHHH-----------------------------------------------------HTTCCSC---CCCTTSCCH
T ss_pred HHHHHHHH-----------------------------------------------------HcCCCCC---CcCCCCCcH
Confidence 66555554 4456666 556678888
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhC
Q 014696 211 LHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 211 Lh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
||+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 105 IHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 8888888888888888887 88888888888888888888888888887764
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=3.2e-29 Score=211.37 Aligned_cols=150 Identities=31% Similarity=0.426 Sum_probs=137.7
Q ss_pred CHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 17 GERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 17 ~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
+++|+.|++.|+.+++++|++.+++.+ .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 579999999999999999999998765 34567999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHH
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLL 176 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 176 (420)
.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll-------------------------------------- 120 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDM-LKMTALHWATEHNHQEVVELLI-------------------------------------- 120 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHH--------------------------------------
T ss_pred HHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH--------------------------------------
Confidence 9999999999999999986 9999999999988887766665
Q ss_pred HHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHH
Q 014696 177 HLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQIL 226 (420)
Q Consensus 177 ~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~L 226 (420)
++|++++ .++..|.||||+|+..|+.+++++|
T Consensus 121 ---------------~~ga~~~---~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 121 ---------------KYGADVH---TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp ---------------HTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ---------------HcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 5677777 6788999999999999999999987
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.1e-29 Score=220.03 Aligned_cols=113 Identities=29% Similarity=0.503 Sum_probs=54.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCC-cccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCc
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPR-LVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGH 96 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~-~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~ 96 (420)
++|+.|+..|+.++|++|++.++. ++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 7 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 7 DDIFTQCREGNAVAVRLWLDNTENDLNQ--GDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp CCHHHHHHHTCHHHHHHHHHCTTSCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHhcCcccccc--cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 345555555555555555544221 221 22233455555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHH
Q 014696 97 WEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRC 133 (420)
Q Consensus 97 ~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~i 133 (420)
.+++++|+++|++++..+. .|.||||+|+..|+.++
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~ 120 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNE-HGNVPLHYACFWGQDQV 120 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHH
Confidence 5555555555555544443 45555555544444433
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.2e-29 Score=219.94 Aligned_cols=160 Identities=28% Similarity=0.350 Sum_probs=147.3
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
+.++||.|+..|+.+++++|++. +.+++..|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 46899999999999999999998 778999999999999999999999999999999999999986 9999999999988
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ ..+..|.|
T Consensus 84 ~~~~v~~Ll-----------------------------------------------------~~g~~~~---~~d~~g~t 107 (179)
T 3f6q_A 84 HRDIVQKLL-----------------------------------------------------QYKADIN---AVNEHGNV 107 (179)
T ss_dssp CHHHHHHHH-----------------------------------------------------HTTCCTT---CCCTTSCC
T ss_pred CHHHHHHHH-----------------------------------------------------HcCCCCC---ccCCCCCC
Confidence 887766666 5677777 67889999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCcc
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~ 267 (420)
|||+|+..|+.+++++|+++|++++.+|..|+|||++|+..++.+++++|++.++...
T Consensus 108 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 108 PLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999999999999999999999999999999999999999999999999999988744
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=7.7e-30 Score=217.87 Aligned_cols=161 Identities=29% Similarity=0.422 Sum_probs=140.3
Q ss_pred cCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHH
Q 014696 12 GCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQA 91 (420)
Q Consensus 12 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A 91 (420)
+.+.+.++|+.|++.|+.+.+++|++.++ .+....+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 44556689999999999999999998654 33344555678999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccch
Q 014696 92 CQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFH 171 (420)
Q Consensus 92 ~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (420)
+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll--------------------------------- 128 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADL-WKFTPLHEAAAKGKYEICKLLL--------------------------------- 128 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHH---------------------------------
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHH---------------------------------
Confidence 999999999999999999999986 9999999999988887766665
Q ss_pred hhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCC
Q 014696 172 LEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGA 231 (420)
Q Consensus 172 ~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~ga 231 (420)
++|++++ .++..|.||||+|+. |+.+++++|+++||
T Consensus 129 --------------------~~ga~~~---~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 129 --------------------QHGADPT---KKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp --------------------HTTCCTT---CCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred --------------------HcCCCCc---ccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 5677887 778899999999776 99999999999886
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.8e-29 Score=219.16 Aligned_cols=159 Identities=24% Similarity=0.288 Sum_probs=144.8
Q ss_pred CCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Q 014696 13 CSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQAC 92 (420)
Q Consensus 13 ~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~ 92 (420)
...+.++||.|+..|+.+++++|++.+++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDI--EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccc--cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 44667899999999999999999999988776544 4689999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchh
Q 014696 93 QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHL 172 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (420)
..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll---------------------------------- 154 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNL-EGETPLIVASKYGRSEIVKKLL---------------------------------- 154 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCT-TCCCHHHHHHHHTCHHHHHHHH----------------------------------
T ss_pred HcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH----------------------------------
Confidence 99999999999999999999986 9999999999988887766665
Q ss_pred hHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 173 EVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 173 ~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|
T Consensus 155 -------------------~~ga~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 155 -------------------ELGADIS---ARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp -------------------HTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------------------HCCCCCC---CcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 5677887 67889999999999999999999999875
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.1e-32 Score=245.92 Aligned_cols=182 Identities=18% Similarity=0.159 Sum_probs=116.2
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHW 97 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~ 97 (420)
++|+.|+..|+.++|++|++.+++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d--~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~ 100 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDPSQPN--EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCTTCCC--TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 45555555555555555555555544332 2335555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHcCCCCCccccCCCChHHHHH--HHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHH
Q 014696 98 EVVLTLILYKANIHRADYLNGGTALHLA--ALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVL 175 (420)
Q Consensus 98 ~iv~~Ll~~ga~~~~~~~~~g~tpL~~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (420)
+++++|+++|++++..++..|.||||+| +..
T Consensus 101 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~----------------------------------------------- 133 (229)
T 2vge_A 101 VICMALVQHGAAIFATTLSDGATAFEKCDPYRE----------------------------------------------- 133 (229)
T ss_dssp HHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTST-----------------------------------------------
T ss_pred HHHHHHHHcCCCcccccCCCCCCHHHHHHHHhc-----------------------------------------------
Confidence 5555555555555555433555555555 444
Q ss_pred HHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCC--ccccccCCCCHHHHHHHcCch
Q 014696 176 LHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGAS--LTAENANGWTPLMVARSWHRT 253 (420)
Q Consensus 176 l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad--~~~~d~~G~TpL~~A~~~g~~ 253 (420)
|+.+++++|+++|++++ ..+..|.||+|.++..+. +++|++.|++ ++.+|..|+||||+|+.+|+.
T Consensus 134 ------~~~~~v~~Ll~~ga~~~---~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 134 ------GYADCATYLADVEQSMG---LMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp ------THHHHHHHHHHHHHHTT---TSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEE
T ss_pred ------ChHHHHHHHHHcCCCcc---cccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCc
Confidence 44555555556677777 556778899986655443 3678889998 678899999999999999999
Q ss_pred hHHHHhh
Q 014696 254 GLEDILS 260 (420)
Q Consensus 254 ~i~~lL~ 260 (420)
++++-++
T Consensus 202 ~~v~~~~ 208 (229)
T 2vge_A 202 GYVPRNY 208 (229)
T ss_dssp EEEEGGG
T ss_pred ceeehhh
Confidence 9987544
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=9.7e-29 Score=208.90 Aligned_cols=154 Identities=25% Similarity=0.353 Sum_probs=137.5
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
++++|+.|+..|+.+.+++|++. ...+....+..|+||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 35899999999999999999998 433333344567999999 9999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHH
Q 014696 96 HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVL 175 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (420)
+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~------------------------------------ 122 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDG-TGALPIHLAVQEGHTAVVSFLAA------------------------------------ 122 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHTCHHHHHHHHT------------------------------------
T ss_pred cHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHhChHHHHHHHHh------------------------------------
Confidence 99999999999999999987 99999999999999888887773
Q ss_pred HHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHh
Q 014696 176 LHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAM 229 (420)
Q Consensus 176 l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~ 229 (420)
+ ++++ ..+..|.||||+|+..|+.+++++|+++
T Consensus 123 -----------------~-~~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 123 -----------------E-SDLH---RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -----------------T-SCTT---CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -----------------c-cCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 3 4555 6678899999999999999999999975
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=4.4e-30 Score=233.36 Aligned_cols=187 Identities=22% Similarity=0.211 Sum_probs=131.6
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++|+.|++.|+.+.++.|++++.+++.. ..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~---~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC---chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4668999999999999999999999888753 3458999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhH
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEV 174 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll------------------------------------ 123 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADS-DGWTPLHCAASCNNVQVCKFLV------------------------------------ 123 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHH------------------------------------
T ss_pred CCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHH------------------------------------
Confidence 999999999999999999987 9999999999888877666665
Q ss_pred HHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc-cHHHHH--HHcCCHHHHHHHHHhCCCcccc---------ccCCCC
Q 014696 175 LLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS-TSLHYA--ACGGNAQCCQILIAMGASLTAE---------NANGWT 242 (420)
Q Consensus 175 ~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~-TpLh~A--a~~g~~~iv~~Ll~~gad~~~~---------d~~G~T 242 (420)
++|++++ ..+..|. ||||+| +..|+.+++++|+++|++++.. +..+.+
T Consensus 124 -----------------~~ga~~~---~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~ 183 (239)
T 1ycs_B 124 -----------------ESGAAVF---AMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQN 183 (239)
T ss_dssp -----------------HTTCCTT---CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSS
T ss_pred -----------------HcCCCcc---eecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCC
Confidence 5677887 5565565 999999 7889999999999999988765 566888
Q ss_pred HHHHHHHcCchhHHHHhhhCC
Q 014696 243 PLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 243 pL~~A~~~g~~~i~~lL~~~~ 263 (420)
++++|.+.|. ++++|.+..
T Consensus 184 ~~eLa~~~G~--~i~vl~~~~ 202 (239)
T 1ycs_B 184 DDELPMKEGD--CMTIIHRED 202 (239)
T ss_dssp TTBCCBCSSC--EEEECCCCT
T ss_pred CCcccccCCC--EEEEEEecC
Confidence 8888877765 445554443
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.4e-29 Score=230.02 Aligned_cols=173 Identities=21% Similarity=0.218 Sum_probs=146.9
Q ss_pred CCCHHHHHHH---HcCCHHHHHHHHHhCCCc---------ccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc-
Q 014696 15 ASGERLVSAA---RDGDLQEAKALLEYNPRL---------VRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN- 81 (420)
Q Consensus 15 ~~~~~L~~Aa---~~g~~~~v~~Ll~~~~~~---------~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d- 81 (420)
.+.++||.|+ +.|+.++|++|++.+++. .....+..|+||||+|+..|+.++|++|+++|++++..+
T Consensus 45 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 124 (260)
T 3jxi_A 45 TGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124 (260)
T ss_dssp TCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCE
T ss_pred CCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccc
Confidence 4778999999 779999999999987542 223333467999999999999999999999999999998
Q ss_pred -------------CCCCCHHHHHHHcCcHHHHHHHHH---cCCCCCccccCCCChHHHHHHHcCC--HHHHHHHHHhcCC
Q 014696 82 -------------YRGQTALMQACQHGHWEVVLTLIL---YKANIHRADYLNGGTALHLAALNGH--SRCIRLLLADYIP 143 (420)
Q Consensus 82 -------------~~g~TpL~~A~~~g~~~iv~~Ll~---~ga~~~~~~~~~g~tpL~~A~~~g~--~~iv~~Ll~~~~~ 143 (420)
..|+||||+|+..|+.++|++|++ +|++++..+. .|+||||+|+..|+ .+.++++.
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~-~g~TpLh~A~~~~~~~~~~~~~~~----- 198 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDS-RGNTVLHALVAIADNTRENTKFVT----- 198 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT-TSCCHHHHHHHHCCSSHHHHHHHH-----
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCC-CCCcHHHHHHHhccCchhHHHHHH-----
Confidence 689999999999999999999999 9999999997 99999999998765 44444443
Q ss_pred CChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccc----cccCCCCccHHHHHHHcCC
Q 014696 144 SVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEY----LSVSGAGSTSLHYAACGGN 219 (420)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~----~~~~~~g~TpLh~Aa~~g~ 219 (420)
+++++|+++|++++.. ...+..|.||||+|++.|+
T Consensus 199 -----------------------------------------~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 199 -----------------------------------------KMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp -----------------------------------------HHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred -----------------------------------------HHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 4677888888887310 1678899999999999999
Q ss_pred HHHHHHHHHhCCCcc
Q 014696 220 AQCCQILIAMGASLT 234 (420)
Q Consensus 220 ~~iv~~Ll~~gad~~ 234 (420)
.+++++|+++|++..
T Consensus 238 ~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 238 IGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999987754
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.2e-29 Score=228.86 Aligned_cols=189 Identities=20% Similarity=0.140 Sum_probs=150.4
Q ss_pred HHHHHHhCCCccccc-CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Q 014696 32 AKALLEYNPRLVRYS-TFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANI 110 (420)
Q Consensus 32 v~~Ll~~~~~~~~~~-~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~ 110 (420)
|+.|++++.+.+... ....|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 467888887766433 3345678999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHH
Q 014696 111 HRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLL 190 (420)
Q Consensus 111 ~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~L 190 (420)
+..+. .|+||||+|+..|+.+++++|+
T Consensus 81 n~~d~-~g~tpLh~A~~~g~~~~v~~Ll---------------------------------------------------- 107 (229)
T 2vge_A 81 NSPDS-HGWTPLHCAASCNDTVICMALV---------------------------------------------------- 107 (229)
T ss_dssp TCCCT-TCCCHHHHHHHTTCHHHHHHHH----------------------------------------------------
T ss_pred CCCCC-CCCCHHHHHHHcCCHHHHHHHH----------------------------------------------------
Confidence 99987 9999999999988887766666
Q ss_pred HHcCCCcccccccC-CCCccHHHHH--HHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCCCCcc
Q 014696 191 LDLGASVSEYLSVS-GAGSTSLHYA--ACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 191 l~~ga~~~~~~~~~-~~g~TpLh~A--a~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~ 267 (420)
++|++++ ..+ ..|.||||+| +..|+.+++++|+++|++++.+|..|.||++.++..+. .++|++.++...
T Consensus 108 -~~ga~~~---~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~ 180 (229)
T 2vge_A 108 -QHGAAIF---ATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELSFREGESVT 180 (229)
T ss_dssp -TTTCCTT---CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEE
T ss_pred -HcCCCcc---cccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cccCcccccccc
Confidence 5677777 444 5899999999 99999999999999999999999999999986554433 356777766533
Q ss_pred ccCCCCCCCchHH
Q 014696 268 EVLPSPYLALPLM 280 (420)
Q Consensus 268 ~~~~~~~~~~pl~ 280 (420)
....+..+.+|++
T Consensus 181 ~~~~d~~G~TpL~ 193 (229)
T 2vge_A 181 VLRRDGPEETDWW 193 (229)
T ss_dssp EEESSCTTCSSEE
T ss_pred ccccCCCcccHHH
Confidence 3334666666654
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.7e-30 Score=250.77 Aligned_cols=237 Identities=16% Similarity=0.070 Sum_probs=161.7
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCccc-ccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC---CCccCCCCCHHHHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVR-YSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDI---NLRNYRGQTALMQA 91 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~-~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v---~~~d~~g~TpL~~A 91 (420)
+.++||.|++.|+.++|++|++.++.... ...+..|.||||+|+.+|+.++|++|+++|+++ +..+.+ .||||+|
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 45899999999999999999998863211 112224578999999999999999999999762 333333 8999999
Q ss_pred HHcCcHHHHHHHHHcCCCCCc--cccCCCChHHHHHH-HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccc
Q 014696 92 CQHGHWEVVLTLILYKANIHR--ADYLNGGTALHLAA-LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDER 168 (420)
Q Consensus 92 ~~~g~~~iv~~Ll~~ga~~~~--~~~~~g~tpL~~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
+.+|+.++|++|+++|++++. .+. .|.||||+|+ .+|+.++|++|++++.
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------------------------- 223 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAAVGRGHHNVINFLLDCPV-------------------------- 223 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHHSTTCCHHHHHHHTTSHH--------------------------
T ss_pred HHCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHHHHCCCHHHHHHHHhCCC--------------------------
Confidence 999999999999999999876 665 7999999999 9999999999996420
Q ss_pred cchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHH---------------------------
Q 014696 169 YFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQ--------------------------- 221 (420)
Q Consensus 169 ~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~--------------------------- 221 (420)
.+.+++..|+..|+.+++++|+++|++++.. .+++++|+..|+.+
T Consensus 224 -~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~-------~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~ 295 (376)
T 2aja_A 224 -MLAYAEIHEFEYGEKYVNPFIARHVNRLKEM-------HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLD 295 (376)
T ss_dssp -HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHH-------HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHH
T ss_pred -ccchHHHHHHHCCCHHHHHHHHhcCcccccc-------cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHH
Confidence 1334555569999999999999999888732 23555555555443
Q ss_pred HHHHHHHhCC-----CccccccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchHHHHHHHHHHcCCCCCCC
Q 014696 222 CCQILIAMGA-----SLTAENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPLMSIVKIARECGWRNSDS 296 (420)
Q Consensus 222 iv~~Ll~~ga-----d~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl~~~l~~a~~~g~~~~~~ 296 (420)
.+++|++.++ +.......+.|||++|+..|+.+++++|++.+...... +. +...++...|+.++..
T Consensus 296 ~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~v~~~~-----~~----~~~~~~~~~~~~~~~~ 366 (376)
T 2aja_A 296 DIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALT-----KA----NNYYINETGGRLDLRA 366 (376)
T ss_dssp HHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHHHHHSC-----C---------------------
T ss_pred HHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChHHHHHH-----HH----hccccccccccccHHH
Confidence 4455554211 01112234668999999999999999999876442222 22 2234566666665554
Q ss_pred C
Q 014696 297 L 297 (420)
Q Consensus 297 ~ 297 (420)
+
T Consensus 367 ~ 367 (376)
T 2aja_A 367 V 367 (376)
T ss_dssp -
T ss_pred H
Confidence 3
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.1e-28 Score=224.07 Aligned_cols=158 Identities=23% Similarity=0.274 Sum_probs=115.0
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
.|.||||.|+..|+.++++.|+++|++++.. ..|.||||+|+..|+.++|++|+++|++++..+. .|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVCAG 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcC
Confidence 4689999999999999999999999999864 7789999999999999999999999999999986 9999999999998
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ .+|..|.|
T Consensus 82 ~~~~v~~Ll-----------------------------------------------------~~ga~~~---~~d~~g~t 105 (239)
T 1ycs_B 82 HTEIVKFLV-----------------------------------------------------QFGVNVN---AADSDGWT 105 (239)
T ss_dssp CHHHHHHHH-----------------------------------------------------HHTCCTT---CCCTTCCC
T ss_pred CHHHHHHHH-----------------------------------------------------HcCCCCC---ccCCCCCC
Confidence 887766666 5678888 77889999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCC-CHHHHH--HHcCchhHHHHhhhCCCC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGW-TPLMVA--RSWHRTGLEDILSTQPEG 265 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~-TpL~~A--~~~g~~~i~~lL~~~~~~ 265 (420)
|||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.+++++|++.++.
T Consensus 106 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 106 PLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhc
Confidence 99999999999999999999999999998887 999999 788999999999987665
No 79
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.4e-27 Score=218.29 Aligned_cols=161 Identities=28% Similarity=0.311 Sum_probs=144.6
Q ss_pred cCCCCCHHHHHHHHcCCHHHHHHHHHhCC-CcccccCCCCCCcHHHHHH-----HcCcHHHHHHHHHcCCCCCCccCCCC
Q 014696 12 GCSASGERLVSAARDGDLQEAKALLEYNP-RLVRYSTFGVRNSPLHYSA-----AQGHHEIVSLLIESGVDINLRNYRGQ 85 (420)
Q Consensus 12 ~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~-~~~~~~~~~~g~t~Lh~Aa-----~~g~~~iv~~Ll~~g~~v~~~d~~g~ 85 (420)
....+.++||.|+..|+.++|++|++.++ +++..+ ..|.||||+|+ ..++.+++++|++.|.+++..+..|+
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~--~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN--RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQ 184 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC--TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC--CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCC
Confidence 34567799999999999999999999997 665544 45689999999 67999999999999999999999999
Q ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhc
Q 014696 86 TALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEF 165 (420)
Q Consensus 86 TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (420)
||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|++.
T Consensus 185 tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~------------------------- 238 (276)
T 4hbd_A 185 TALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTALMCACEHGHKEIAGLLLAV------------------------- 238 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHTS-------------------------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHHhc-------------------------
Confidence 999999999999999999999999999997 999999999999888877777631
Q ss_pred ccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhC
Q 014696 166 DERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMG 230 (420)
Q Consensus 166 ~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~g 230 (420)
.|++++ ..|..|.||||+|+..|+.+++++|++++
T Consensus 239 ---------------------------~gad~~---~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 239 ---------------------------PSCDIS---LTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ---------------------------TTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ---------------------------CCCCCc---CcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 577888 77889999999999999999999999974
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=5.4e-28 Score=204.63 Aligned_cols=142 Identities=23% Similarity=0.181 Sum_probs=114.1
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCCh-HHHHHH
Q 014696 48 FGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGT-ALHLAA 126 (420)
Q Consensus 48 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~t-pL~~A~ 126 (420)
...|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++..+. .|.| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-ATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-TTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHH
Confidence 345689999999999999999999999999999999999999995 9999999999999999999986 8998 999999
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGA 206 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~ 206 (420)
..|+.+++++|+ ++|++++ .++..
T Consensus 87 ~~~~~~~v~~Ll-----------------------------------------------------~~ga~~~---~~d~~ 110 (156)
T 1bi7_B 87 REGFLDTLVVLH-----------------------------------------------------RAGARLD---VRDAW 110 (156)
T ss_dssp HHTCHHHHHHHH-----------------------------------------------------HHTCCSS---CCCTT
T ss_pred HCCCHHHHHHHH-----------------------------------------------------HcCCCCc---ccCCC
Confidence 988887766665 5678888 67889
Q ss_pred CccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 207 GSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 207 g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
|.||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 111 g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 111 GRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999999999999999999999999998744
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=2.8e-28 Score=212.60 Aligned_cols=157 Identities=15% Similarity=0.131 Sum_probs=84.1
Q ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHHcCcH----HHHHHHHHcCCCCCccccCCCChHHHHHHH
Q 014696 53 SPLHYSAAQGHHEIVSLLIESGVDINLRN-YRGQTALMQACQHGHW----EVVLTLILYKANIHRADYLNGGTALHLAAL 127 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d-~~g~TpL~~A~~~g~~----~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 127 (420)
++|+.|+..|+.+.++.+++.+ ++..+ ..|+||||+|+.+|+. +++++|+++|++++..+. .|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK-EGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT-TCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 4555555555555555555543 23333 4455555555555543 355555555555555553 55555555555
Q ss_pred cCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCC
Q 014696 128 NGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAG 207 (420)
Q Consensus 128 ~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g 207 (420)
.|+.++.+ ..+++++|+++|++++ .+|..|
T Consensus 85 ~~~~~~~~-----------------------------------------------~~~iv~~Ll~~Gadin---~~d~~g 114 (186)
T 3t8k_A 85 GGGNDITG-----------------------------------------------TTELCKIFLEKGADIT---ALYKPY 114 (186)
T ss_dssp HCTTCHHH-----------------------------------------------HHHHHHHHHHTTCCSS---SCBGGG
T ss_pred cCCcchhh-----------------------------------------------HHHHHHHHHHCCCCCC---ccCCCc
Confidence 44332211 1234555555566655 445555
Q ss_pred c-cHHHHHHHcC-----CHHHHHHHHH-hCCCccccccCCCCHHHHHHHcCchhHHHHhhhC
Q 014696 208 S-TSLHYAACGG-----NAQCCQILIA-MGASLTAENANGWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 208 ~-TpLh~Aa~~g-----~~~iv~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
. ||||+|+..+ +.+++++|++ +|+|++.+|..|+||||+|++.|+.+++++|.+.
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 5 6666665532 2346666666 6666666666666666666666666666666543
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.1e-27 Score=208.93 Aligned_cols=165 Identities=15% Similarity=0.089 Sum_probs=141.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcH----HHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHH----EIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~----~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
++|+.|++.|+++.++.++..+.... . +..|+||||+|+..|+. +++++|+++|+++|.+|..|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~~~--~-~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYEDK--E-SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSSCH--H-HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcccc--c-ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 46999999999999999999875432 1 13468999999999975 59999999999999999999999999999
Q ss_pred cCc------HHHHHHHHHcCCCCCccccCCCC-hHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcc
Q 014696 94 HGH------WEVVLTLILYKANIHRADYLNGG-TALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFD 166 (420)
Q Consensus 94 ~g~------~~iv~~Ll~~ga~~~~~~~~~g~-tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (420)
.|+ .+++++|+++|++++.+|. .|. ||||+|+..+..+.
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~g~ttpLh~A~~~~~~~~--------------------------------- 130 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYK-PYKIVVFKNIFNYFVDEN--------------------------------- 130 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBG-GGTBCTTGGGGGCCSCHH---------------------------------
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCC-CcCchHHHHHHHcCCChh---------------------------------
Confidence 987 6899999999999999997 898 99999998554220
Q ss_pred cccchhhHHHHHHhcCCHHHHHHHHH-cCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccc
Q 014696 167 ERYFHLEVLLHLTLNGHVESVQLLLD-LGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAEN 237 (420)
Q Consensus 167 ~~~~~~~~~l~aa~~g~~~~v~~Ll~-~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d 237 (420)
++.+++++|++ +|++++ .+|..|.||||+|++.|+.++|++|.++..+.+.++
T Consensus 131 ---------------~~~~iv~~Ll~~~gad~~---~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 131 ---------------EMIPLYKLIFSQSGLQLL---IKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp ---------------HHHHHHHHHHTSTTCCTT---CCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred ---------------hHHHHHHHHHHhcCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 23457888889 999999 789999999999999999999999998865555544
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=3.4e-27 Score=194.95 Aligned_cols=87 Identities=29% Similarity=0.270 Sum_probs=53.6
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCC-CChHHHHHHHc
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLN-GGTALHLAALN 128 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~-g~tpL~~A~~~ 128 (420)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++..+. . |.||||+|+..
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~~g~t~L~~A~~~ 88 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP-ATLTRPVHDAARE 88 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT-TTTBCHHHHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC-CCCCCHHHHHHHc
Confidence 34566666666666666666666666666666666666666666 666666666666666666654 4 66666666655
Q ss_pred CCHHHHHHHH
Q 014696 129 GHSRCIRLLL 138 (420)
Q Consensus 129 g~~~iv~~Ll 138 (420)
|+.+++++|+
T Consensus 89 ~~~~~v~~Ll 98 (136)
T 1d9s_A 89 GFLDTLVVLH 98 (136)
T ss_dssp TCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 5554444443
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=8e-27 Score=192.68 Aligned_cols=133 Identities=22% Similarity=0.238 Sum_probs=116.5
Q ss_pred CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHh
Q 014696 74 GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLR 153 (420)
Q Consensus 74 g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 153 (420)
+++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+. |+.+++++|++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~-~~~~~v~~Ll~-------------- 65 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNR-FGRRPIQVMMM-GSAQVAELLLL-------------- 65 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCTTTTTSTT-SCHHHHHHHHH--------------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCC-CCCCHHHHHHc-CCHHHHHHHHH--------------
Confidence 568888999999999999999999999999999999988886 89999999999 99998887774
Q ss_pred hhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCC-CccHHHHHHHcCCHHHHHHHHHhCCC
Q 014696 154 KKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGA-GSTSLHYAACGGNAQCCQILIAMGAS 232 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~-g~TpLh~Aa~~g~~~iv~~Ll~~gad 232 (420)
+|++++ .++.. |.||||+|+..|+.+++++|+++|++
T Consensus 66 ---------------------------------------~g~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 103 (136)
T 1d9s_A 66 ---------------------------------------HGAEPN---CADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (136)
T ss_dssp ---------------------------------------HTCCSS---CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCC
T ss_pred ---------------------------------------CCCCCC---CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 466777 66777 89999999999999999999999999
Q ss_pred ccccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 233 LTAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 233 ~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
++.+|..|+||||+|+..++.+++++|+++++
T Consensus 104 ~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 104 LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999999999999988764
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.9e-25 Score=181.07 Aligned_cols=125 Identities=42% Similarity=0.666 Sum_probs=98.9
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC-CCCcHHHHHHHcCh
Confidence 57888888888888888888888888888888888888888888888888888888888887775 78888888887777
Q ss_pred HHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccH
Q 014696 131 SRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTS 210 (420)
Q Consensus 131 ~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~Tp 210 (420)
.+++++|+ ++|++++ ..+..|.||
T Consensus 81 ~~~~~~Ll-----------------------------------------------------~~g~~~~---~~~~~g~t~ 104 (126)
T 1n0r_A 81 LEVVKLLL-----------------------------------------------------EAGADVN---AKDKNGRTP 104 (126)
T ss_dssp HHHHHHHH-----------------------------------------------------HTTCCTT---CCCTTSCCH
T ss_pred HHHHHHHH-----------------------------------------------------HcCCCCc---ccCCCCCCH
Confidence 66655555 4456666 556678888
Q ss_pred HHHHHHcCCHHHHHHHHHhCCC
Q 014696 211 LHYAACGGNAQCCQILIAMGAS 232 (420)
Q Consensus 211 Lh~Aa~~g~~~iv~~Ll~~gad 232 (420)
||+|+..|+.+++++|+++|+|
T Consensus 105 l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 105 LHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHcCcHHHHHHHHHcCCC
Confidence 8888888888888888888875
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.4e-25 Score=185.15 Aligned_cols=87 Identities=36% Similarity=0.489 Sum_probs=52.2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
+.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA-IGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcCC
Confidence 35666666666666666666666666666666666666666666666666666666666655554 55555555555555
Q ss_pred HHHHHHHH
Q 014696 131 SRCIRLLL 138 (420)
Q Consensus 131 ~~iv~~Ll 138 (420)
.+++++|+
T Consensus 93 ~~~v~~Ll 100 (136)
T 2jab_A 93 LEIAEVLL 100 (136)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444333
No 87
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=1.1e-27 Score=231.12 Aligned_cols=228 Identities=14% Similarity=0.095 Sum_probs=147.0
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCC--ccCCCCCHHHHHH-
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINL--RNYRGQTALMQAC- 92 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~--~d~~g~TpL~~A~- 92 (420)
+.+|||.|+..|+.++|++|++++++.........+.||||+|+..|+.++|++|+++|++++. .|..|.||||+|+
T Consensus 128 ~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~ 207 (376)
T 2aja_A 128 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAV 207 (376)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHH
Confidence 4469999999999999999999997532111101116999999999999999999999999887 8889999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhc-cCCCCchhcccccch
Q 014696 93 QHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKS-NKTGSILEFDERYFH 171 (420)
Q Consensus 93 ~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 171 (420)
.+|+.++|++|+++|+ .|.||||+|+..|+.+++++|++++........ .+.... ...............
T Consensus 208 ~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~-~l~~A~~~g~~~vv~~~~~~~~ 278 (376)
T 2aja_A 208 GRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD-AFKLSNPDGVFDLVTKSECLQG 278 (376)
T ss_dssp TTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT-TTTTTSSSSCCCCSSHHHHHHH
T ss_pred HCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH-HHHHHHHCCChhhhcHHhhhhh
Confidence 9999999999999763 388999999999999999999987543211110 000000 000000000000000
Q ss_pred h---hHHHHHHhcCCHHHHHHHHHc---------CCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccC
Q 014696 172 L---EVLLHLTLNGHVESVQLLLDL---------GASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENAN 239 (420)
Q Consensus 172 ~---~~~l~aa~~g~~~~v~~Ll~~---------ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 239 (420)
. ..++.....+..+.+++|++. |++++ .+.||||+|+..|+.++|++|++.| ..++..
T Consensus 279 ~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n-------~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~ 348 (376)
T 2aja_A 279 FYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPG-------DANELLRLALRLGNQGACALLLSIP---SVLALT 348 (376)
T ss_dssp HHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTT-------CCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSC
T ss_pred HHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCC-------CccHHHHHHHHcCcHHHHHHHHcCh---HHHHHH
Confidence 0 111222233457788888874 33333 5779999999999999999999875 568889
Q ss_pred CCCHHHHHHHcCchhHHHHhhhC
Q 014696 240 GWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 240 G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
|+|++.+|...|+.+++++-+..
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ 371 (376)
T 2aja_A 349 KANNYYINETGGRLDLRAVALEH 371 (376)
T ss_dssp C----------------------
T ss_pred HHhccccccccccccHHHHHHHH
Confidence 99999999999999998876654
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=6.8e-26 Score=187.21 Aligned_cols=133 Identities=29% Similarity=0.321 Sum_probs=100.8
Q ss_pred CCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHh
Q 014696 74 GVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLR 153 (420)
Q Consensus 74 g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 153 (420)
|+|+ .+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll--------------- 63 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH-AGWTPLHEACNHGHLKVVELLL--------------- 63 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHH---------------
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHcCCHHHHHHHH---------------
Confidence 5566 6677788888888888888888888888888877775 7888888888777766655555
Q ss_pred hhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 154 KKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 64 --------------------------------------~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 64 --------------------------------------QHKALVN---TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp --------------------------------------HTTCCTT---CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred --------------------------------------HcCCccc---CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3455666 55667889999999999999999999999999
Q ss_pred cccccCCCCHHHHHHHcCchhHHHHhhhCCC
Q 014696 234 TAENANGWTPLMVARSWHRTGLEDILSTQPE 264 (420)
Q Consensus 234 ~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~~ 264 (420)
+.+|..|+||+++|+..+..+++++|.+...
T Consensus 103 ~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 103 NAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999998888888888876654
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2e-25 Score=188.81 Aligned_cols=143 Identities=22% Similarity=0.184 Sum_probs=114.0
Q ss_pred CCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhc
Q 014696 77 INLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKS 156 (420)
Q Consensus 77 v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~ 156 (420)
.+..+..|.||||+|+..|+.++|++|+++|++++..+. .|+||||+|+ .|+.+++++|+
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll------------------ 64 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLL------------------ 64 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHH------------------
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHH------------------
Confidence 345677899999999999999999999999999999986 9999999984 66666655555
Q ss_pred cCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc-HHHHHHHcCCHHHHHHHHHhCCCccc
Q 014696 157 NKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST-SLHYAACGGNAQCCQILIAMGASLTA 235 (420)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T-pLh~Aa~~g~~~iv~~Ll~~gad~~~ 235 (420)
++|++++ ..+..|.| |||+|+..|+.+++++|+++|++++.
T Consensus 65 -----------------------------------~~g~~~~---~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~ 106 (156)
T 1bi7_B 65 -----------------------------------LHGAEPN---CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV 106 (156)
T ss_dssp -----------------------------------TTTCCCC---CCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC
T ss_pred -----------------------------------HcCCCCC---CcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc
Confidence 6678888 67888999 99999999999999999999999999
Q ss_pred cccCCCCHHHHHHHcCchhHHHHhhhCCCCccccCCCCCCCchH
Q 014696 236 ENANGWTPLMVARSWHRTGLEDILSTQPEGRLEVLPSPYLALPL 279 (420)
Q Consensus 236 ~d~~G~TpL~~A~~~g~~~i~~lL~~~~~~~~~~~~~~~~~~pl 279 (420)
+|..|+||||+|+..|+.+++++|+++++.... .+..+.+|.
T Consensus 107 ~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~~ 148 (156)
T 1bi7_B 107 RDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG--SNHARIDAA 148 (156)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc--cCcCcCccc
Confidence 999999999999999999999999999876322 344444443
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.5e-24 Score=178.94 Aligned_cols=123 Identities=29% Similarity=0.394 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+.++||.|+..|+.+++++|++++.+++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKD--EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45589999999999999999999998887654 4568999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDK-FGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CCHHHHHHHHHcCCCCcCcCC-CCCCHHHHHHHCCCHHHHHHHHHc
Confidence 999999999999999999986 999999999999999999999975
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=7.1e-25 Score=190.52 Aligned_cols=139 Identities=24% Similarity=0.264 Sum_probs=121.5
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcC
Q 014696 50 VRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 50 ~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
.|+||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..++..|+||||+|+..|
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 45799999999999999999999 99999999999999999999999999999999999999888558999999999988
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ .+|..|.|
T Consensus 122 ~~~~v~~Ll-----------------------------------------------------~~ga~~~---~~d~~g~t 145 (183)
T 3deo_A 122 RPEVVEALV-----------------------------------------------------ELGADIE---VEDERGLT 145 (183)
T ss_dssp CHHHHHHHH-----------------------------------------------------HHTCCTT---CCCTTSCC
T ss_pred cHHHHHHHH-----------------------------------------------------HcCCCCc---CCCCCCCC
Confidence 877766665 5677777 67889999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQ 262 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~ 262 (420)
|||+|++.++ ...+.++|++|+..|+.+++++|.++
T Consensus 146 pl~~A~~~~~-----------------~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 146 ALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHH-----------------TCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcc-----------------CcccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999987432 24568999999999999999999765
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=8.2e-25 Score=205.31 Aligned_cols=138 Identities=26% Similarity=0.285 Sum_probs=100.4
Q ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCC------ccCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCCccccCCCChHHH
Q 014696 53 SPLHYSAAQGHHEIVSLLIESGVDINL------RNYRGQTALMQACQH---GHWEVVLTLILYKANIHRADYLNGGTALH 123 (420)
Q Consensus 53 t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~------~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~ 123 (420)
++|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. |+.+++++|+++|++++..+. .|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCHHH
Confidence 458888888888888888888888777 577788888888876 778888888888888877775 7888888
Q ss_pred HHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCccccccc
Q 014696 124 LAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSV 203 (420)
Q Consensus 124 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~ 203 (420)
+|+..|+.+++++|+ ++|++++ .+
T Consensus 232 ~A~~~g~~~~v~~Ll-----------------------------------------------------~~gad~~---~~ 255 (301)
T 2b0o_E 232 YAALYNQPDCLKLLL-----------------------------------------------------KGRALVG---TV 255 (301)
T ss_dssp HHHHTTCHHHHHHHH-----------------------------------------------------HTTCCCS---CC
T ss_pred HHHHcCCHHHHHHHH-----------------------------------------------------HcCCCCC---Cc
Confidence 888777666555554 5667777 66
Q ss_pred CCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHcCch
Q 014696 204 SGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSWHRT 253 (420)
Q Consensus 204 ~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 253 (420)
|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+++|+.
T Consensus 256 d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 256 NEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 77788888888888888888888888765 467888888877763
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-24 Score=198.27 Aligned_cols=87 Identities=26% Similarity=0.304 Sum_probs=57.6
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
|+||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+..|+.++|++|+++|++++..++..|.||||+|+..|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 4567777777777777777766 666666666677777777777777777777777776666664366677777666666
Q ss_pred HHHHHHHH
Q 014696 131 SRCIRLLL 138 (420)
Q Consensus 131 ~~iv~~Ll 138 (420)
.+++++|+
T Consensus 124 ~~~v~~Ll 131 (244)
T 3ui2_A 124 PEVVEALV 131 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55544444
No 94
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.1e-23 Score=170.63 Aligned_cols=124 Identities=40% Similarity=0.566 Sum_probs=116.2
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+.++|+.|++.|+.+++++|++.+.+++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~--~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK--NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCC--CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 46899999999999999999999988776544 4689999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcC
Q 014696 96 HWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYI 142 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~ 142 (420)
+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|+
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred hHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 99999999999999999886 99999999999999999999998764
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.9e-24 Score=178.46 Aligned_cols=128 Identities=30% Similarity=0.409 Sum_probs=102.6
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHH
Q 014696 47 TFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAA 126 (420)
Q Consensus 47 ~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~ 126 (420)
.+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~ 84 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY-QNDSPLHDAA 84 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG-GGCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC-CCCCHHHHHH
Confidence 345568899999999999999999998888888888899999999999999999999999888888876 8889999988
Q ss_pred HcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCC
Q 014696 127 LNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGA 206 (420)
Q Consensus 127 ~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~ 206 (420)
..|+.+++++|+ ++|++++ ..+..
T Consensus 85 ~~~~~~~v~~Ll-----------------------------------------------------~~ga~~~---~~~~~ 108 (137)
T 3c5r_A 85 KNGHVDIVKLLL-----------------------------------------------------SYGASRN---AVNIF 108 (137)
T ss_dssp HTTCHHHHHHHH-----------------------------------------------------HTTCCTT---CCCTT
T ss_pred HcCCHHHHHHHH-----------------------------------------------------HcCCCCC---CCCCC
Confidence 887777666555 5567777 66778
Q ss_pred CccHHHHHHHcCCHHHHHHHHHhCC
Q 014696 207 GSTSLHYAACGGNAQCCQILIAMGA 231 (420)
Q Consensus 207 g~TpLh~Aa~~g~~~iv~~Ll~~ga 231 (420)
|.||||+|+..+..+++++|.+.+.
T Consensus 109 g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 109 GLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp SCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHhhccHHHHHhhcccccc
Confidence 8899999988888888887776543
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2.4e-24 Score=193.06 Aligned_cols=134 Identities=27% Similarity=0.327 Sum_probs=89.3
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCccccCCCChHHHHHHHcC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILY-KANIHRADYLNGGTALHLAALNG 129 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~g 129 (420)
|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.++|++|+++ |++++..+. .|.||||+|+..|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~-~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK-LGDTALHAAAWKG 151 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-TSCCHHHHHHHHT
T ss_pred cccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC-CCCCHHHHHHHcC
Confidence 46788888888888888888888888888888888888888888888888888877 778777775 7778887777776
Q ss_pred CHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCcc
Q 014696 130 HSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGST 209 (420)
Q Consensus 130 ~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~T 209 (420)
+.+++++|+ ++|++++ ..+..|.|
T Consensus 152 ~~~~v~~Ll-----------------------------------------------------~~ga~~~---~~~~~g~t 175 (222)
T 3ehr_A 152 YADIVQLLL-----------------------------------------------------AKGARTD---LRNIEKKL 175 (222)
T ss_dssp CHHHHHHHH-----------------------------------------------------HHTCCSC---CCCTTSCC
T ss_pred CHHHHHHHH-----------------------------------------------------HcCCCCc---cccCCCCC
Confidence 666555554 4566666 56667777
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCCccccccCCC
Q 014696 210 SLHYAACGGNAQCCQILIAMGASLTAENANGW 241 (420)
Q Consensus 210 pLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~ 241 (420)
|||+|+..|+.++++.|++.|++.+.++.+|+
T Consensus 176 ~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 176 AFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHCCSHHHHHHHC-----------------
T ss_pred HHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 77777777777777777777777766665543
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=197.29 Aligned_cols=124 Identities=21% Similarity=0.240 Sum_probs=113.7
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccc----cCCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCccCCCCCHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRY----STFGVRNSPLHYSAAQ---GHHEIVSLLIESGVDINLRNYRGQTAL 88 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~----~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~g~~v~~~d~~g~TpL 88 (420)
..++|+.|+..|+++.|+.|++.+++++.. ..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 346899999999999999999999887753 1345679999999997 899999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHh
Q 014696 89 MQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLAD 140 (420)
Q Consensus 89 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 140 (420)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~~~~~iv~~Ll~~ 281 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNE-AGETALDIARKKHHKECEELLEQA 281 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCT-TSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999999999999986 999999999999999999998864
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=2.6e-23 Score=189.28 Aligned_cols=142 Identities=27% Similarity=0.239 Sum_probs=126.4
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN-YRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d-~~g~TpL~~A~~ 93 (420)
.+.++||.|++.|+.++|+.|++ +.+++..+ ..|+||||+|+..|+.++|++|+++|++++.++ ..|+||||+|+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVD--ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBC--TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcC--CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 34589999999999999999999 77776654 456999999999999999999999999999998 889999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhh
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLE 173 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (420)
.|+.++|++|+++|++++..+. .|.||||+|+..+
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~~~-------------------------------------------- 155 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDE-RGLTALELAREIL-------------------------------------------- 155 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHH--------------------------------------------
T ss_pred cCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHHH--------------------------------------------
Confidence 9999999999999999999986 9999999998521
Q ss_pred HHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCc
Q 014696 174 VLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASL 233 (420)
Q Consensus 174 ~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~ 233 (420)
....+.||||+|+..|+.+++++|++++.+.
T Consensus 156 -----------------------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 156 -----------------------------KTTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp -----------------------------TTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred -----------------------------hccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 1135789999999999999999999986553
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.4e-23 Score=169.90 Aligned_cols=46 Identities=24% Similarity=0.374 Sum_probs=28.6
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHH
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVAR 248 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~ 248 (420)
+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|.
T Consensus 69 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 69 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 3445566666666666666666666666666666666666666663
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=8.2e-23 Score=177.44 Aligned_cols=110 Identities=33% Similarity=0.307 Sum_probs=101.0
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRN-YRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d-~~g~TpL~~A~~ 93 (420)
.+.++||.|+..|+.++++.|++ +.+++..+ ..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d--~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVD--ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCC--TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 34589999999999999999999 77766644 456999999999999999999999999999998 889999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.|+.+++++|+++|++++..+. .|.||||+|+..
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 153 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDE-RGLTALELAREI 153 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCT-TSCCHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCCC-CCCCHHHHHHHh
Confidence 9999999999999999999986 999999999863
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=2.8e-23 Score=168.13 Aligned_cols=116 Identities=28% Similarity=0.335 Sum_probs=104.0
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
+.+.++||.|+..|+.+++++|++.+++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE--GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCT--TSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 3556899999999999999999999988776544 56899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHH
Q 014696 94 HGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSR 132 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~ 132 (420)
.|+.+++++|+++|++++..+. .|.||||+|...+..+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGP-DGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHhCCHHHHH
Confidence 9999999999999999999986 9999999995443333
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.1e-23 Score=188.73 Aligned_cols=131 Identities=22% Similarity=0.230 Sum_probs=112.4
Q ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCC
Q 014696 80 RNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKT 159 (420)
Q Consensus 80 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~ 159 (420)
.+..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|+.+++++|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll--------------------- 126 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK-AGSTALYWACHGGHKDIVEMLF--------------------- 126 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHT---------------------
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCC-CCCCHHHHHHHcCCHHHHHHHH---------------------
Confidence 466789999999999999999999999999999886 9999999999998888777776
Q ss_pred CCchhcccccchhhHHHHHHhcCCHHHHHHHHHc-CCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCcccccc
Q 014696 160 GSILEFDERYFHLEVLLHLTLNGHVESVQLLLDL-GASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENA 238 (420)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~-ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~ 238 (420)
+. |++++ ..+..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 127 --------------------------------~~~g~~~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 127 --------------------------------TQPNIELN---QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp --------------------------------TSTTCCCC---CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT
T ss_pred --------------------------------cCCCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 34 77787 7788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHcCchhHHHHhhhCCCCcc
Q 014696 239 NGWTPLMVARSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 239 ~G~TpL~~A~~~g~~~i~~lL~~~~~~~~ 267 (420)
.|+|||++|+..++.++++.|+..+....
T Consensus 172 ~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 172 EKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp TSCCHHHHCCSHHHHHHHC----------
T ss_pred CCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 99999999999999999999999887643
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=1.5e-22 Score=203.32 Aligned_cols=136 Identities=27% Similarity=0.319 Sum_probs=112.7
Q ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCCc------cCCCCCHHHHHHH---cCcHHHHHHHHHcCCCCCccccCCCChHH
Q 014696 52 NSPLHYSAAQGHHEIVSLLIESGVDINLR------NYRGQTALMQACQ---HGHWEVVLTLILYKANIHRADYLNGGTAL 122 (420)
Q Consensus 52 ~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~------d~~g~TpL~~A~~---~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL 122 (420)
.+.||.|+..|+.+.|+.|++.|+++|.. |..|+||||+|+. .|+.++|++|+++|++++..|. .|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcHH
Confidence 46899999999999999999999999987 8899999999976 8999999999999999999987 999999
Q ss_pred HHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccc
Q 014696 123 HLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLS 202 (420)
Q Consensus 123 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~ 202 (420)
|+|+..|+.+++++|+ ++|++++ .
T Consensus 212 h~A~~~g~~~~v~~Ll-----------------------------------------------------~~ga~~~---~ 235 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLL-----------------------------------------------------KGRALVG---T 235 (497)
T ss_dssp HHHTTTTCHHHHHHHH-----------------------------------------------------HTCCCCS---C
T ss_pred HHHHHcCCHHHHHHHH-----------------------------------------------------HcCCCCC---C
Confidence 9999888877666665 6788888 7
Q ss_pred cCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHHHHc
Q 014696 203 VSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 203 ~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A~~~ 250 (420)
.|..|.||||+|+..|+.+++++|+++|++++. ||+|++..+
T Consensus 236 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 236 VNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeeccc
Confidence 788999999999999999999999999999986 466655443
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.9e-22 Score=183.71 Aligned_cols=126 Identities=22% Similarity=0.267 Sum_probs=116.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHhCCCcccc----cCCCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCccCCCCCHHHH
Q 014696 18 ERLVSAARDGDLQEAKALLEYNPRLVRY----STFGVRNSPLHYSAAQ---GHHEIVSLLIESGVDINLRNYRGQTALMQ 90 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~----~~~~~g~t~Lh~Aa~~---g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~ 90 (420)
.+|+.|++.|+++.++.+++.+.+++.. ..+..|+||||+|+.. |+.+++++|+++|+++|.+|..|+||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 5799999999999999999999886532 2345679999999999 99999999999999999999999999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCC
Q 014696 91 ACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPS 144 (420)
Q Consensus 91 A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~ 144 (420)
|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|++++...
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEIANE-SGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCccC-CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999997 9999999999999999999999987643
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=5.4e-22 Score=190.60 Aligned_cols=142 Identities=25% Similarity=0.265 Sum_probs=96.5
Q ss_pred CcHHHHHHHc-CcHHHHHHHHHcCCCCCCcc--CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHc
Q 014696 52 NSPLHYSAAQ-GHHEIVSLLIESGVDINLRN--YRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALN 128 (420)
Q Consensus 52 ~t~Lh~Aa~~-g~~~iv~~Ll~~g~~v~~~d--~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 128 (420)
.|+||+|+.. |+.+++++|+++|+++|..+ ..|.||||+|+..|+.++|++|+++|++++..+. .|+||||+|+..
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~-~G~TpLh~A~~~ 278 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS-AGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 3688888888 88888888888888888877 7788888888888888888888888888887775 788888888877
Q ss_pred CCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCc
Q 014696 129 GHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGS 208 (420)
Q Consensus 129 g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~ 208 (420)
|+.+++++|+ ++|++++ ..|..|.
T Consensus 279 g~~~~v~~LL-----------------------------------------------------~~Gad~~---~~d~~G~ 302 (368)
T 3jue_A 279 GHTGLACLFL-----------------------------------------------------KRGADLG---ARDSEGR 302 (368)
T ss_dssp TCHHHHHHHH-----------------------------------------------------HTTCCTT---CCCTTSC
T ss_pred CcHHHHHHHH-----------------------------------------------------HCcCCCC---CcCCCCC
Confidence 7766555554 5567777 6677788
Q ss_pred cHHHHHHHcCCHHHHHHHHHhC---CCccccccCCCCHHHHHHHc
Q 014696 209 TSLHYAACGGNAQCCQILIAMG---ASLTAENANGWTPLMVARSW 250 (420)
Q Consensus 209 TpLh~Aa~~g~~~iv~~Ll~~g---ad~~~~d~~G~TpL~~A~~~ 250 (420)
||||+|+..|+.+++++|++++ ++....+..+.|+++++...
T Consensus 303 TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 303 DPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 8888888888888888888765 33334455667777776654
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=8.5e-22 Score=197.76 Aligned_cols=127 Identities=21% Similarity=0.234 Sum_probs=115.6
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccc----cCCCCCCcHHHHHHH---cCcHHHHHHHHHcCCCCCCccCCCCCHH
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRY----STFGVRNSPLHYSAA---QGHHEIVSLLIESGVDINLRNYRGQTAL 88 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~----~~~~~g~t~Lh~Aa~---~g~~~iv~~Ll~~g~~v~~~d~~g~TpL 88 (420)
..+.|+.|+..|+++.|+.|++.+++++.. ..+..|.||||+|+. .|+.++|++|+++|+++|.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 347899999999999999999999988754 234567999999966 9999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCC
Q 014696 89 MQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIP 143 (420)
Q Consensus 89 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~ 143 (420)
|+|+..|+.++|++|+++|++++..+. .|.||||+|+..|+.+++++|+++++.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNE-AGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCT-TCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999999997 999999999999999999999876543
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=7.5e-22 Score=189.61 Aligned_cols=125 Identities=18% Similarity=0.208 Sum_probs=117.6
Q ss_pred CCHHHHHHHHc-CCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Q 014696 16 SGERLVSAARD-GDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQH 94 (420)
Q Consensus 16 ~~~~L~~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~ 94 (420)
.+++||.|+.. |++++++.|++.+++++..+.+..|.||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 34699999999 99999999999999998877556779999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhc
Q 014696 95 GHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADY 141 (420)
Q Consensus 95 g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~ 141 (420)
|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+..+
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~-~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDS-EGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHCcCCCCCcCC-CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999987 9999999999999999999999653
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=1e-21 Score=150.66 Aligned_cols=91 Identities=44% Similarity=0.669 Sum_probs=84.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCC
Q 014696 51 RNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGH 130 (420)
Q Consensus 51 g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~ 130 (420)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCC
Confidence 68999999999999999999999999999999999999999999999999999999999999886 89999999999999
Q ss_pred HHHHHHHHHhcC
Q 014696 131 SRCIRLLLADYI 142 (420)
Q Consensus 131 ~~iv~~Ll~~~~ 142 (420)
.+++++|+++++
T Consensus 81 ~~~~~~Ll~~ga 92 (93)
T 1n0q_A 81 LEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998753
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=1.3e-21 Score=181.32 Aligned_cols=194 Identities=20% Similarity=0.214 Sum_probs=134.9
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCccCCCCCHHHHHHH
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIES-GVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~-g~~v~~~d~~g~TpL~~A~~ 93 (420)
.+.+.++.+...||....+.+...-+......... +... ..+...-..+++... ....+.......++|+.|+.
T Consensus 65 ~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~-~s~~----~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~ 139 (278)
T 1dcq_A 65 LGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNP-GSDM----IARKDYITAKYMERRYARKKHADTAAKLHSLCEAVK 139 (278)
T ss_dssp CCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCT-TCCH----HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCC-CCCH----HHHHHHHHHHHHHhhcccccccccchhhhhhhhHhh
Confidence 44567888888888766665543332221111111 1112 111222222233322 11222222234578999999
Q ss_pred cCcHHHHHHHHHcCCCCCcc------ccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCCCCchhccc
Q 014696 94 HGHWEVVLTLILYKANIHRA------DYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKTGSILEFDE 167 (420)
Q Consensus 94 ~g~~~iv~~Ll~~ga~~~~~------~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (420)
.|+.+.++.+++.|++++.. +. .|.||||+|+..|+.
T Consensus 140 ~~d~~~~~~ll~~g~~~~~~~~l~~~~~-~g~t~Lh~A~~~~~~------------------------------------ 182 (278)
T 1dcq_A 140 TRDIFGLLQAYADGVDLTEKIPLANGHE-PDETALHLAVRSVDR------------------------------------ 182 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTSBCCCSSCSS-TTCBHHHHHHHHCCT------------------------------------
T ss_pred hcccHHHHHHHHhhcchhhhcccccccc-CCCCcchHHHHhccc------------------------------------
Confidence 99999999999999885433 43 789999999887210
Q ss_pred ccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccCCCCHHHHH
Q 014696 168 RYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENANGWTPLMVA 247 (420)
Q Consensus 168 ~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~G~TpL~~A 247 (420)
|+.+++++|+++|++++ .+|..|.||||+|+..|+.++|++|+++|+|++.+|.+|+||||+|
T Consensus 183 --------------~~~~~v~~Ll~~ga~in---~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 245 (278)
T 1dcq_A 183 --------------TSLHIVDFLVQNSGNLD---KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 245 (278)
T ss_dssp --------------TTHHHHHHHHHHCSCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred --------------chHHHHHHHHHCCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHH
Confidence 33445555667788988 7788999999999999999999999999999999999999999999
Q ss_pred HHcCchhHHHHhhhCCCCcc
Q 014696 248 RSWHRTGLEDILSTQPEGRL 267 (420)
Q Consensus 248 ~~~g~~~i~~lL~~~~~~~~ 267 (420)
+..|+.+++++|+++++...
T Consensus 246 ~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 246 KRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHTTCHHHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999887643
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7.7e-21 Score=151.67 Aligned_cols=108 Identities=34% Similarity=0.443 Sum_probs=68.9
Q ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhccCC
Q 014696 80 RNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSNKT 159 (420)
Q Consensus 80 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~~~ 159 (420)
+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~~~~Ll--------------------- 62 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK-DGNTPLHLAAKNGHAEIVKLLL--------------------- 62 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS-SSCCTTHHHHTTTCHHHHHHHT---------------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHH---------------------
Confidence 455666666666666666666666666666666554 6666666666655555444443
Q ss_pred CCchhcccccchhhHHHHHHhcCCHHHHHHHHHcCCCcccccccCCCCccHHHHHHHcCCHHHHHHHHHhCCCccccccC
Q 014696 160 GSILEFDERYFHLEVLLHLTLNGHVESVQLLLDLGASVSEYLSVSGAGSTSLHYAACGGNAQCCQILIAMGASLTAENAN 239 (420)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~aa~~g~~~~v~~Ll~~ga~~~~~~~~~~~g~TpLh~Aa~~g~~~iv~~Ll~~gad~~~~d~~ 239 (420)
++|++++ ..+..|.||||+|+..|+.+++++|+++|+++|.++..
T Consensus 63 --------------------------------~~g~~~~---~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~ 107 (115)
T 2l6b_A 63 --------------------------------AKGADVN---ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWG 107 (115)
T ss_dssp --------------------------------TTTCCTT---CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCC
T ss_pred --------------------------------HcCCCCc---ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcc
Confidence 3445555 45566777777777777778888888778887777777
Q ss_pred CCCHH
Q 014696 240 GWTPL 244 (420)
Q Consensus 240 G~TpL 244 (420)
|.||-
T Consensus 108 ~~~~~ 112 (115)
T 2l6b_A 108 SSHHH 112 (115)
T ss_dssp CC---
T ss_pred ccccc
Confidence 77763
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=7.4e-20 Score=140.18 Aligned_cols=92 Identities=38% Similarity=0.525 Sum_probs=85.7
Q ss_pred CCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC
Q 014696 16 SGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHG 95 (420)
Q Consensus 16 ~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g 95 (420)
+.++||.|+..|+.+++++|++.+++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDK--NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 45899999999999999999999998876554 5689999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCC
Q 014696 96 HWEVVLTLILYKAN 109 (420)
Q Consensus 96 ~~~iv~~Ll~~ga~ 109 (420)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999975
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.3e-20 Score=146.79 Aligned_cols=109 Identities=32% Similarity=0.460 Sum_probs=75.6
Q ss_pred cccCCCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHH
Q 014696 10 SFGCSASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALM 89 (420)
Q Consensus 10 ~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~ 89 (420)
.+....+.++||.|+..|+.+++++|++.+++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d--~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARS--KDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEH 80 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCC--SSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC--CCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 3444555667777777777777777777776665543 34467777777777777777777777777777777777777
Q ss_pred HHHHcCcHHHHHHHHHcCCCCCccccCCCChH
Q 014696 90 QACQHGHWEVVLTLILYKANIHRADYLNGGTA 121 (420)
Q Consensus 90 ~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tp 121 (420)
+|+..|+.+++++|+++|++++..+. .|.+|
T Consensus 81 ~A~~~~~~~~~~~Ll~~ga~~n~~~~-~~~~~ 111 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKGADVNARSW-GSSHH 111 (115)
T ss_dssp HHHTTTCHHHHHHHHTTSSSHHHHSC-CCC--
T ss_pred HHHHCCCHHHHHHHHHcCCCCCcCCc-ccccc
Confidence 77777777777777777777777665 56555
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=9.3e-19 Score=138.54 Aligned_cols=89 Identities=28% Similarity=0.374 Sum_probs=83.8
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccccCCCChHHHHHHH
Q 014696 48 FGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQHGHWEVVLTLILYKANIHRADYLNGGTALHLAAL 127 (420)
Q Consensus 48 ~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 127 (420)
+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+.
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~ 99 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK-FGKTAFDISID 99 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-CCCcHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999886 99999999999
Q ss_pred cCCHHHHHHH
Q 014696 128 NGHSRCIRLL 137 (420)
Q Consensus 128 ~g~~~iv~~L 137 (420)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=9.7e-17 Score=126.81 Aligned_cols=88 Identities=31% Similarity=0.490 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Q 014696 14 SASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLRNYRGQTALMQACQ 93 (420)
Q Consensus 14 ~~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~d~~g~TpL~~A~~ 93 (420)
..+.++||.|+..|+.+++++|++.+++++..+ ..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d--~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKD--KNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccC--CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 356689999999999999999999998887654 456899999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHH
Q 014696 94 HGHWEVVLTL 103 (420)
Q Consensus 94 ~g~~~iv~~L 103 (420)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999999987
No 115
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=3.8e-09 Score=74.72 Aligned_cols=55 Identities=25% Similarity=0.573 Sum_probs=45.6
Q ss_pred CCCCCCCCCCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 294 SDSLSTCPDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 294 ~~~~~~~~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
......+...|.||++....+++.||||. +|..|+.. ...||+||..|..++++-
T Consensus 8 ~e~~~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~----------------~~~CP~CR~~i~~~~~i~ 63 (68)
T 2ea5_A 8 VEPSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKY----------------FQQCPMCRQFVQESFALS 63 (68)
T ss_dssp CCCSCCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHH----------------CSSCTTTCCCCCCEECCC
T ss_pred ccccCCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhc----------------CCCCCCCCcchhceEEee
Confidence 33444556789999999999999999999 99999962 135999999999998864
No 116
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.68 E-value=9.5e-09 Score=71.76 Aligned_cols=52 Identities=33% Similarity=0.597 Sum_probs=43.4
Q ss_pred CCCCcccccCccceEEEe--CCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 300 CPDPCVVCLERKCTVAAK--GCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~--~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
+...|.||+++...+++. ||||. +|..|+..+-... ..||+||+.|.+++++
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~------------~~CPiCR~~i~~~i~i 61 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRN------------KPCPVCRQPIQMIVLT 61 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTT------------CCCTTTCCCCCEEEEE
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcC------------CcCCCcCcchhceEee
Confidence 346799999999999887 99999 8999998876432 3499999999988764
No 117
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.62 E-value=1.9e-08 Score=69.97 Aligned_cols=51 Identities=27% Similarity=0.542 Sum_probs=41.7
Q ss_pred CCCcccccCccceEEEe--CCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 301 PDPCVVCLERKCTVAAK--GCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~--~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.+.|.||+++....+.. ||||. +|..|+..+-... ..||+||+.|.+++++
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~------------~~CPiCR~~i~~~i~i 60 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAG------------ASCPICKKEIQLVIKV 60 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTT------------CBCTTTCCBCCEEEEE
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhC------------CcCCCcCchhhceEEE
Confidence 46799999988776666 99999 9999998875332 3599999999998775
No 118
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.52 E-value=1e-07 Score=69.53 Aligned_cols=46 Identities=30% Similarity=0.730 Sum_probs=40.3
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
..|.||++....++..||||. +|..|+..+ ..||+||..|.+++++
T Consensus 19 ~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~----------------~~CP~Cr~~i~~~~~i 65 (79)
T 2yho_A 19 MLCMVCCEEEINSTFCPCGHTVCCESCAAQL----------------QSCPVCRSRVEHVQHV 65 (79)
T ss_dssp TBCTTTSSSBCCEEEETTCBCCBCHHHHTTC----------------SBCTTTCCBCCEEEEC
T ss_pred CEeEEeCcccCcEEEECCCCHHHHHHHHHhc----------------CcCCCCCchhhCeEEE
Confidence 579999999999999999999 999999322 2699999999999875
No 119
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.35 E-value=3.7e-07 Score=65.67 Aligned_cols=46 Identities=30% Similarity=0.701 Sum_probs=39.7
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
..|.||++.....+..||||. +|..|...+ ..||+||..|.+.+++
T Consensus 25 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~----------------~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 25 KLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----------------DKCPMCYTVITFKQKI 71 (74)
T ss_dssp TBCTTTSSSBCCEEEETTCCBCCCHHHHTTC----------------SBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCCCCCEEEcCCCChhHHHHhhhcC----------------ccCCCcCcCccCcEEE
Confidence 579999999999999999999 999998322 4599999999988764
No 120
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=1.3e-06 Score=62.80 Aligned_cols=55 Identities=27% Similarity=0.632 Sum_probs=42.6
Q ss_pred CCCCCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 299 TCPDPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 299 ~~~d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
...+.|.||++.. -.+...+|||.+|..|........ ..||+||..|..+.+++.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~~~ 70 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR------------KVCPLCNMPVLQLAQLSG 70 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC------------SBCTTTCCBCSSCCSCCC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC------------CcCCCcCcccccccccCC
Confidence 4457899999864 334556999999999998876443 259999999998877765
No 121
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.29 E-value=2.1e-07 Score=67.18 Aligned_cols=46 Identities=30% Similarity=0.681 Sum_probs=39.1
Q ss_pred CCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
..|.||++.....+..||||. +|..|... ...||+||..|...+++
T Consensus 26 ~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~----------------~~~CP~Cr~~i~~~~~i 72 (75)
T 2ecg_A 26 KLCKICMDRNIAIVFVPCGHLVTCKQCAEA----------------VDKCPMCYTVITFKQKI 72 (75)
T ss_dssp HSCSSSCSSCCCBCCSSSCCCCBCHHHHHH----------------CSBCTTTCCBCCCCCBC
T ss_pred CCCCcCCCCCCCEEEecCCCHHHHHHHhhC----------------CCCCccCCceecCcEEE
Confidence 469999999999999999999 99999832 14599999999887664
No 122
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.23 E-value=2e-06 Score=61.57 Aligned_cols=52 Identities=27% Similarity=0.661 Sum_probs=40.6
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++..-..+..+|||.+|..|...+.... .....||+||..|..
T Consensus 18 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETS---------CGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSS---------CSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcC---------CCCCCCCCCCCcCCc
Confidence 4456799999988887888999999999998875421 234579999988753
No 123
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.20 E-value=1.7e-06 Score=61.06 Aligned_cols=54 Identities=31% Similarity=0.616 Sum_probs=42.5
Q ss_pred CCCCCcccccCccce-EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 299 TCPDPCVVCLERKCT-VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~-v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
...+.|.||++.... +...+|||.+|..|........ ..||+||..+..+.+..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQN------------PTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHS------------CSTTTTCCCCCCEECCC
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCc------------CcCcCCChhhHhhhhcc
Confidence 345789999998766 5788999999999998775432 25999999998876543
No 124
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=2.1e-06 Score=61.11 Aligned_cols=50 Identities=26% Similarity=0.521 Sum_probs=40.0
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.+...|.||++.....+..+|||.+|..|...+.... ..||+||..|..-
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLG------------KRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCS------------SBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCC------------CcCcCcCchhCHh
Confidence 3456799999988888888999999999997664322 4599999998754
No 125
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=2.1e-06 Score=60.72 Aligned_cols=50 Identities=26% Similarity=0.671 Sum_probs=38.7
Q ss_pred CCCCCCcccccCccceE-------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 298 STCPDPCVVCLERKCTV-------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v-------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
..+...|.||++..-.. +..+|||.+|..|...+.... ..||+||..|.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 68 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHC------------SSCTTTCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcC------------CCCCCCCCccCc
Confidence 34567899999876543 778999999999998876442 359999988753
No 126
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.09 E-value=3.2e-06 Score=56.72 Aligned_cols=47 Identities=26% Similarity=0.508 Sum_probs=37.4
Q ss_pred CCCCcccccCccce----EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 300 CPDPCVVCLERKCT----VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 300 ~~d~C~vC~~~~~~----v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
..+.|.||++..-. +...+|||.+|..|...+.... ..||+||..|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG------------YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT------------CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC------------CcCCCCCCcCC
Confidence 35789999987643 7888999999999998876443 35999998774
No 127
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.08 E-value=1.7e-06 Score=61.36 Aligned_cols=51 Identities=24% Similarity=0.691 Sum_probs=40.4
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDK 362 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~ 362 (420)
.+...|.||++.... +..+|||.+|..|...+.. ....||+||..|.+...
T Consensus 13 ~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~------------~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD------------RHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC------------CCSSCHHHHHCTTCCCC
T ss_pred CCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH------------CcCcCCCcCCcccCCCc
Confidence 445789999998888 7789999999999976532 23569999998886543
No 128
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.04 E-value=7.3e-06 Score=59.56 Aligned_cols=57 Identities=21% Similarity=0.433 Sum_probs=40.3
Q ss_pred CCCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 298 STCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
..+...|.||++.....+..+|||.+|..|...+..... ....+...||+||..+..
T Consensus 9 ~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~-----~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 9 VQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAV-----TSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCS-----SSCCCCCCCSSSCCCCCS
T ss_pred cccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcc-----cCCCCCCcCCCCCCcCCH
Confidence 344567999998777666789999999999955433211 011245679999998864
No 129
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.04 E-value=7.8e-06 Score=57.71 Aligned_cols=50 Identities=30% Similarity=0.538 Sum_probs=38.4
Q ss_pred CCCCCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 299 TCPDPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 299 ~~~d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.....|.||++.. -.+...+|||.+|..|...+.... ..||+||..|...
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN------------KKCPICRVDIEAQ 64 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCSBSCSC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC------------CCCcCcCccccCc
Confidence 3456799997643 456778999999999998876543 2499999988764
No 130
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.04 E-value=3.1e-06 Score=68.88 Aligned_cols=47 Identities=32% Similarity=0.728 Sum_probs=38.4
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..|.||++..-..+..+|||.+|..|........ ..||+||..|...
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRK------------IECPICRKDIKSK 100 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTC------------SBCTTTCCBCCCE
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHHHHHcC------------CcCCCCCCcCCCC
Confidence 3699999988888889999999999997764322 3599999998654
No 131
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=6.6e-06 Score=58.68 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=39.0
Q ss_pred CCCCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 300 CPDPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
+...|.||++.....+.. +|||.+|..|........ ..||+||..|..-.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYS------------NRCPKCNIVVHQTQ 64 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHC------------SSCTTTCCCCCSSC
T ss_pred CCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcC------------CcCCCcCcccCccc
Confidence 345799999987766665 999999999998876432 35999999887643
No 132
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=6.6e-06 Score=61.18 Aligned_cols=52 Identities=25% Similarity=0.547 Sum_probs=40.3
Q ss_pred CCCCCcccccCccce----EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCT----VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~----v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++.... ....+|||.+|..|...+.... .....||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS---------INGVRCPFCSKITRI 68 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC---------SSCBCCTTTCCCBCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC---------CCCcCCCCCCCcccc
Confidence 345679999998776 6777999999999998887543 134579999987643
No 133
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=7.2e-06 Score=59.98 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=38.9
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
....|.||++.....+..+|||.+|..|........ ..||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRAT------------PRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHC------------SBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCC------------CcCCCcCcccc
Confidence 345699999988777889999999999998876432 35999999986
No 134
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.01 E-value=4.7e-06 Score=55.90 Aligned_cols=47 Identities=30% Similarity=0.595 Sum_probs=35.3
Q ss_pred CCCCcccccCccce---EEEeC-CCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 300 CPDPCVVCLERKCT---VAAKG-CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 300 ~~d~C~vC~~~~~~---v~~~~-cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
+...|.||++..-. +...+ |||.+|..|....-.. ...||+||..|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~------------~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS------------HSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT------------CCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc------------CCcCcCCCCEeE
Confidence 45689999987655 55666 9999999999766422 235999998764
No 135
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.00 E-value=5.8e-06 Score=59.33 Aligned_cols=52 Identities=21% Similarity=0.495 Sum_probs=40.4
Q ss_pred CCCCcccccCccceEEEeC-CCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccc
Q 014696 300 CPDPCVVCLERKCTVAAKG-CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFD 361 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~-cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~ 361 (420)
+...|.||++..-.-+..+ |||.+|..|........ +...||+||..+.+..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~----------~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES----------DEHTCPTCHQNDVSPD 66 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHS----------SSSCCSSSCCSSCCTT
T ss_pred CCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhc----------CCCcCCCCCCcCCCcc
Confidence 3456999999877777789 99999999998887543 2346999999765543
No 136
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=5.3e-06 Score=58.05 Aligned_cols=50 Identities=30% Similarity=0.630 Sum_probs=38.4
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++.....+..+|||.+|..|....... ....||+||..|..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~-----------~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSS-----------SSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTT-----------SSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHh-----------CcCCCCCCCcCCCh
Confidence 344569999987766666899999999999887631 23459999988754
No 137
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.98 E-value=1.3e-05 Score=58.15 Aligned_cols=53 Identities=25% Similarity=0.515 Sum_probs=39.2
Q ss_pred CCCCCcccccCcc---ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 299 TCPDPCVVCLERK---CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 299 ~~~d~C~vC~~~~---~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
.....|.||++.. -.+...+|||.+|..|...+.... ..||+||..|..-...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~~~~ 68 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH------------DSCPVCRKSLTGQNTA 68 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT------------CSCTTTCCCCCCSCSC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC------------CcCcCcCCccCCcccC
Confidence 3456899997653 445667999999999998776332 3599999998875433
No 138
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.96 E-value=1.3e-05 Score=59.08 Aligned_cols=54 Identities=28% Similarity=0.574 Sum_probs=41.6
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
....|.||++....-+..+|||.+|..|...+..... ...+...||+||..+..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~------~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHSFCRACITLNYESNR------NTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSB------CTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhcc------CCCCCCCCCCCCCcCCH
Confidence 3567999999877767789999999999988776542 11235679999988764
No 139
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.95 E-value=7.5e-06 Score=61.33 Aligned_cols=49 Identities=20% Similarity=0.439 Sum_probs=37.1
Q ss_pred CCCCCcccccCccce---EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCT---VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~---v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.....|.||++..-. +...+|||.||..|...+.... ..||+||..|..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~------------~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS------------GTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT------------CBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC------------CcCcCcCccCCC
Confidence 345679999866444 6778999999999998876432 259999987753
No 140
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.94 E-value=4.7e-06 Score=59.23 Aligned_cols=49 Identities=27% Similarity=0.682 Sum_probs=38.0
Q ss_pred CCCCCcccccCccceE-------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTV-------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v-------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++..... +..+|||.+|..|...+.... ..||+||..+..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC------------CCCCCCCCccCh
Confidence 3456799999875443 778999999999998876433 259999988764
No 141
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.94 E-value=1.2e-05 Score=58.14 Aligned_cols=51 Identities=22% Similarity=0.436 Sum_probs=35.8
Q ss_pred CCCCCcccccCccc--eEEEeC--CCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 299 TCPDPCVVCLERKC--TVAAKG--CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 299 ~~~d~C~vC~~~~~--~v~~~~--cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.+...|.||++..- .+.+.+ |||.+|..|+..+... +...||.||..+..-
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~-----------~~~~CP~CR~~~~~~ 63 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTD-----------ENGLCPACRKPYPED 63 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTS-----------SCSBCTTTCCBCSSC
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhc-----------CCCCCCCCCCccCCC
Confidence 34567999999441 223344 9999999999777532 234699999988753
No 142
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.90 E-value=6.4e-06 Score=65.66 Aligned_cols=48 Identities=23% Similarity=0.534 Sum_probs=39.1
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..|.||++.....+..+|||.+|..|........ ...||+||..+...
T Consensus 53 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 100 (124)
T 3fl2_A 53 FQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQ-----------VFSCPACRYDLGRS 100 (124)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTT-----------CCBCTTTCCBCCTT
T ss_pred CCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHC-----------cCCCCCCCccCCCC
Confidence 4699999988877888999999999998776422 34699999998763
No 143
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=97.89 E-value=6.3e-06 Score=57.15 Aligned_cols=47 Identities=28% Similarity=0.697 Sum_probs=36.7
Q ss_pred CCCcccccCccce-------EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCT-------VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~-------v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
...|.||++.... ++..+|||.+|..|........ ..||+||..+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHC------------SBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcC------------CCCCCCCccCCc
Confidence 4579999986544 3777999999999998876542 259999988764
No 144
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.89 E-value=1.6e-05 Score=58.52 Aligned_cols=55 Identities=25% Similarity=0.542 Sum_probs=41.3
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++.....+..+|||.+|..|...+...... ..+...||+||..+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~------~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSML------DKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHH------TTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhc------CCCCCcCCCCCCccCH
Confidence 345679999998777677799999999999887654200 1234679999998874
No 145
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=1.3e-05 Score=57.54 Aligned_cols=49 Identities=29% Similarity=0.621 Sum_probs=37.0
Q ss_pred CCCCCcccccCc---cceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLER---KCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~---~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+.+.|.||++. .-.+...+|||.+|..|...+.... ..||+||..|..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~------------~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN------------RTCPICRADSGP 72 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHC------------SSCTTTCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcC------------CcCcCcCCcCCC
Confidence 345679999954 3345778999999999998876443 249999988754
No 146
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.88 E-value=6.2e-06 Score=61.93 Aligned_cols=54 Identities=22% Similarity=0.499 Sum_probs=40.3
Q ss_pred CCCCcccccCccceEEEeC-CCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 300 CPDPCVVCLERKCTVAAKG-CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~-cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
+.-.|.||++..-.-+..+ |||.+|..|........ +...||+||..+.....+
T Consensus 12 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~----------~~~~CP~Cr~~~~~~~~~ 66 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES----------DEHTCPTCHQNDVSPDAL 66 (92)
T ss_dssp TTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHC----------TTCCCTTTCCSSCCTTSC
T ss_pred cCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhc----------CCCcCcCCCCcCCCcccc
Confidence 3456999998776667788 99999999998776432 224699999987544333
No 147
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.87 E-value=1.9e-05 Score=54.96 Aligned_cols=48 Identities=21% Similarity=0.524 Sum_probs=34.9
Q ss_pred CCCcccccC----ccce-EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLE----RKCT-VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~----~~~~-v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
...|.||++ .+.. ++..+|||.+|..|...+.... ...||+||..+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG-----------AGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT-----------SSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcC-----------CCcCCCCCCcccc
Confidence 457999999 2222 2567999999999998775422 3469999988754
No 148
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.82 E-value=8e-06 Score=76.54 Aligned_cols=48 Identities=31% Similarity=0.685 Sum_probs=41.6
Q ss_pred CCCcccccCccceEEEeCCCcc-cchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 301 PDPCVVCLERKCTVAAKGCDHE-FCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~-~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
...|.||++.....+..||||. +|..|+..+ ..||+||..|.+.++++
T Consensus 295 ~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~----------------~~CP~CR~~i~~~~~i~ 343 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL----------------RKCPICRGIIKGTVRTF 343 (345)
T ss_dssp TCBCTTTSSSBCCEEEETTCCEEECTTTGGGC----------------SBCTTTCCBCCEEEECC
T ss_pred CCCCCccCCcCCceEEcCCCChhHhHHHHhcC----------------CcCCCCCCCccCeEEee
Confidence 3679999999999999999999 999998422 45999999999998875
No 149
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.81 E-value=1.1e-05 Score=62.91 Aligned_cols=49 Identities=37% Similarity=0.793 Sum_probs=39.3
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
..|.||++.....+..+|||.+|..|........ .+...||+||..+..
T Consensus 22 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQK---------KGPSQCPLCKNDITK 70 (112)
T ss_dssp TSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSS---------SSSCCCTTTSCCCCT
T ss_pred CCCcccChhhcCeEECCCCCHHHHHHHHHHHHhC---------CCCCCCcCCCCcCCH
Confidence 4699999987776778999999999998887644 123569999998875
No 150
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.80 E-value=1e-05 Score=54.46 Aligned_cols=43 Identities=21% Similarity=0.497 Sum_probs=34.5
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
.-.|.||++........+|||.+|..|... ....||+||..+.
T Consensus 6 ~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~---------------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLLPCLHTLCSGCLEA---------------SGMQCPICQAPWP 48 (56)
T ss_dssp CSSCSSSCSSCBCCSCSTTSCCSBTTTCSS---------------SSSSCSSCCSSSS
T ss_pred CCCceEeCCccCCeEEcCCCCcccHHHHcc---------------CCCCCCcCCcEee
Confidence 346999999887778889999999999722 2456999998765
No 151
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.77 E-value=2.2e-05 Score=74.10 Aligned_cols=51 Identities=27% Similarity=0.642 Sum_probs=42.4
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
..|.||++.....+..+|||.+|..|....... ....||+||..|.....+
T Consensus 333 ~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~-----------~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 333 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQES-----------EGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp SBCTTTSSSBCCEEEETTCCEECHHHHHHHHHH-----------TCSBCTTTCCBCCEEEEC
T ss_pred CCCCccCcCCCCeEEeCCCChhhHHHHHHHHhc-----------CCCCCCCCCCccCCceeE
Confidence 579999999999999999999999999777642 124599999999887544
No 152
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.76 E-value=1.4e-05 Score=65.80 Aligned_cols=51 Identities=25% Similarity=0.539 Sum_probs=40.7
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKL 363 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~ 363 (420)
-.|.||++.....+..+|||.+|..|........ ...||+||..+..-..+
T Consensus 79 ~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~~~l 129 (150)
T 1z6u_A 79 FMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQ-----------VFSCPACRHDLGQNYIM 129 (150)
T ss_dssp TBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTT-----------CCBCTTTCCBCCTTCCC
T ss_pred CEeecCChhhcCCEEcCCCCchhHHHHHHHHHhC-----------CCcCCCCCccCCCCCCC
Confidence 4699999988888889999999999998877532 23599999998765333
No 153
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.73 E-value=2e-05 Score=60.07 Aligned_cols=46 Identities=22% Similarity=0.566 Sum_probs=38.2
Q ss_pred CCcccccCccceEEE-eCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 302 DPCVVCLERKCTVAA-KGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 302 d~C~vC~~~~~~v~~-~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
..|.||++..-..+. .+|||.+|..|......... ..||+||..+.
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~-----------~~CP~Cr~~~~ 69 (100)
T 3lrq_A 23 FRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQR-----------AQCPHCRAPLQ 69 (100)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTC-----------SBCTTTCCBCC
T ss_pred CCCccCCccccCccccCCCCChhhHHHHHHHHHHCc-----------CCCCCCCCcCC
Confidence 569999998877777 89999999999988775541 45999999884
No 154
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.70 E-value=4.8e-05 Score=52.46 Aligned_cols=47 Identities=30% Similarity=0.688 Sum_probs=36.5
Q ss_pred CCCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 298 STCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
..+...|.||++..-..+..+|||.+|..|...+.... .....||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETS---------CGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHC---------SSCCCCSCC
T ss_pred CccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcC---------CCCCcCcCC
Confidence 34456799999988777778999999999998887532 124569998
No 155
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.69 E-value=3.2e-05 Score=58.83 Aligned_cols=46 Identities=24% Similarity=0.590 Sum_probs=37.2
Q ss_pred CCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 302 DPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
..|.||++..-.-+.. +|||.+|..|........ ..||+||..+..
T Consensus 23 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~ 69 (99)
T 2y43_A 23 LRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYK------------TQCPTCCVTVTE 69 (99)
T ss_dssp TBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTC------------CBCTTTCCBCCG
T ss_pred CCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCC------------CCCCCCCCcCCh
Confidence 4699999887766666 899999999998876432 359999998875
No 156
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.64 E-value=3.1e-05 Score=60.69 Aligned_cols=48 Identities=27% Similarity=0.688 Sum_probs=37.3
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..|.||++.....+..+|||.+|..|...... .+...||+||..+...
T Consensus 16 ~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~-----------~~~~~CP~Cr~~~~~~ 63 (115)
T 3l11_A 16 CQCGICMEILVEPVTLPCNHTLCKPCFQSTVE-----------KASLCCPFCRRRVSSW 63 (115)
T ss_dssp HBCTTTCSBCSSCEECTTSCEECHHHHCCCCC-----------TTTSBCTTTCCBCHHH
T ss_pred CCCccCCcccCceeEcCCCCHHhHHHHHHHHh-----------HCcCCCCCCCcccCcc
Confidence 46999999877777789999999999943321 1235699999999863
No 157
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.64 E-value=7.1e-05 Score=54.10 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=39.0
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.-.|.+|++-.-.-+..+|||.+|..|....... +...||+||..+..-
T Consensus 8 ~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~-----------~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 8 YFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-----------GHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTT-----------TCCBCTTTCCBCSSC
T ss_pred cCCCCCccccccCCEEcCCCCeecHHHHHHHHHH-----------CcCCCCCCcCCCChh
Confidence 4579999987777777899999999999887643 234699999988643
No 158
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.64 E-value=7e-05 Score=50.60 Aligned_cols=47 Identities=30% Similarity=0.682 Sum_probs=35.7
Q ss_pred CCCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCC
Q 014696 298 STCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLC 353 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~C 353 (420)
..+...|.||++..-..+..+|||.+|..|........ .....||+|
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~---------~~~~~CP~C 58 (58)
T 2ecj_A 12 LQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDL---------ERDFPCPVC 58 (58)
T ss_dssp SCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSS---------CCSCCCSCC
T ss_pred cccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhc---------CCCCCCCCC
Confidence 34456799999987777778999999999998875431 134569998
No 159
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.63 E-value=2.3e-05 Score=65.75 Aligned_cols=52 Identities=29% Similarity=0.654 Sum_probs=40.5
Q ss_pred CCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 302 DPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
..|.||++..-..+.. +|||.+|..|...+.... ...||+||..|.....++
T Consensus 55 ~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~~~l~ 107 (165)
T 2ckl_B 55 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSG-----------NKECPTCRKKLVSKRSLR 107 (165)
T ss_dssp HBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTT-----------CCBCTTTCCBCCSGGGEE
T ss_pred CCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhC-----------cCCCCCCCCcCCCcccCC
Confidence 3699999987776666 999999999998876532 345999999997654443
No 160
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.59 E-value=5.5e-05 Score=58.56 Aligned_cols=48 Identities=25% Similarity=0.533 Sum_probs=38.5
Q ss_pred CCCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
...|.||++..-.-+.. +|||.+|..|........ ..||.||..+..-
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETS------------KYCPICDVQVHKT 63 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSC------------SBCTTTCCBSCSS
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhC------------CcCcCCCcccccc
Confidence 45799999987777776 999999999998776432 4599999988753
No 161
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=8.1e-05 Score=54.26 Aligned_cols=47 Identities=30% Similarity=0.629 Sum_probs=33.6
Q ss_pred CCCCcccccCccc---------------eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 300 CPDPCVVCLERKC---------------TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 300 ~~d~C~vC~~~~~---------------~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
+.+.|.||++..- .+...+|||.|+..|........ ..||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~------------~~CP~CR~~~~ 75 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN------------NRCPLCQQDWV 75 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC------------CBCTTTCCBCC
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC------------CCCCCcCCCcc
Confidence 4566888876542 33444699999999998775433 25999998764
No 162
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.48 E-value=7.2e-05 Score=58.46 Aligned_cols=53 Identities=25% Similarity=0.598 Sum_probs=37.9
Q ss_pred CCCcccccCcc------------------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERK------------------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~------------------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.+.|.||++.. ..+...+|||.||..|......... ......||+||..+...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~-------~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN-------KDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC-------CSSCCBCTTTCCBSSSC
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc-------CCCCCcCCCCCCccCCC
Confidence 46899998864 2334779999999999988764321 01245699999877654
No 163
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.39 E-value=0.00011 Score=57.79 Aligned_cols=50 Identities=20% Similarity=0.489 Sum_probs=39.5
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
+.-.|.||++....-+..+|||.+|..|......... ..||+||..+..-
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~-----------~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-----------HKCPVDNEILLEN 66 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHC-----------SBCTTTCCBCCGG
T ss_pred CCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCC-----------CCCCCCCCCcCHH
Confidence 3457999999877777789999999999987764431 2599999988763
No 164
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.36 E-value=0.00014 Score=57.04 Aligned_cols=48 Identities=25% Similarity=0.522 Sum_probs=39.2
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
..|.||++..-..+..+|||.+|..|........ ...||+||..+..-
T Consensus 24 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 71 (116)
T 1rmd_A 24 ISCQICEHILADPVETSCKHLFCRICILRCLKVM-----------GSYCPSCRYPCFPT 71 (116)
T ss_dssp TBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT-----------CSBCTTTCCBCCGG
T ss_pred CCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHC-----------cCcCCCCCCCCCHh
Confidence 4699999988777778999999999998776542 23599999998764
No 165
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.28 E-value=0.00015 Score=58.18 Aligned_cols=49 Identities=27% Similarity=0.649 Sum_probs=38.2
Q ss_pred CCCCcccccCccceE-------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 300 CPDPCVVCLERKCTV-------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v-------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
+...|.||++..-.- +..+|||.+|..|........ ..||+||..+..-
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~~ 61 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINHK 61 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTC------------SBCTTTCCBCTTT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhC------------CCCCCCCCcCccc
Confidence 456799999876543 788999999999998876433 2599999988643
No 166
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.28 E-value=0.0003 Score=53.93 Aligned_cols=46 Identities=33% Similarity=0.606 Sum_probs=34.3
Q ss_pred CCCCcccccCcc------------------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 300 CPDPCVVCLERK------------------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 300 ~~d~C~vC~~~~------------------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..+.|.||++.. +.+...+|||.++..|........ ..||+||+..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~------------~~CP~Cr~~~ 99 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR------------QVCPLDNREW 99 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC------------SBCSSSCSBC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcC------------CcCcCCCCcc
Confidence 457788887542 346778999999999998876443 3499999874
No 167
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.18 E-value=0.00012 Score=54.94 Aligned_cols=52 Identities=25% Similarity=0.553 Sum_probs=36.2
Q ss_pred CCCcccccCccce--E-EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCC--Cccc
Q 014696 301 PDPCVVCLERKCT--V-AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPL--CRHG 356 (420)
Q Consensus 301 ~d~C~vC~~~~~~--v-~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~--CR~~ 356 (420)
.-.|.||++.... + ...+|||.+|..|+..+.... +..+....+.||. ||..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~----i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELL----IKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHH----HHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHH----hhcCCcccccCccccCCCC
Confidence 3469999986432 2 234799999999999887654 1222224578999 9987
No 168
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.17 E-value=9.4e-05 Score=58.11 Aligned_cols=43 Identities=26% Similarity=0.597 Sum_probs=34.9
Q ss_pred CCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 302 DPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
-.|.||++....-+.. +|||.+|..|...... ..||+||..+.
T Consensus 23 ~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--------------~~CP~Cr~~~~ 66 (117)
T 1jm7_B 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--------------TGCPVCYTPAW 66 (117)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--------------TBCSSSCCBCS
T ss_pred CCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc--------------CCCcCCCCcCc
Confidence 5699999987777777 9999999999955532 45999999874
No 169
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.05 E-value=0.00014 Score=59.01 Aligned_cols=48 Identities=21% Similarity=0.472 Sum_probs=37.5
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
.+.-.|.||++-...-+..+|||.+|..|...+.... ...||.||..|
T Consensus 29 ~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~-----------~~~CP~Cr~~~ 76 (141)
T 3knv_A 29 EAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSG-----------PQNCAACVHEG 76 (141)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGS-----------CEECHHHHHTT
T ss_pred CcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcC-----------CCCCCCCCCcc
Confidence 3345699999977766778999999999998876422 23599999986
No 170
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=96.91 E-value=0.00051 Score=54.98 Aligned_cols=49 Identities=27% Similarity=0.682 Sum_probs=37.7
Q ss_pred CCCCCcccccCccceE-------EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 299 TCPDPCVVCLERKCTV-------AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v-------~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.+...|.||++..-.. +..+|||.+|..|....-... ..||+||..|..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~------------~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA------------NTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC------------SBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC------------CCCCCCCCcCCh
Confidence 4456799999865542 777999999999998776443 359999988764
No 171
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.86 E-value=0.0018 Score=46.78 Aligned_cols=58 Identities=21% Similarity=0.440 Sum_probs=40.8
Q ss_pred CCCCCCCcccccCcc---ceEEEeCCC-----cccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 297 LSTCPDPCVVCLERK---CTVAAKGCD-----HEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 297 ~~~~~d~C~vC~~~~---~~v~~~~cg-----H~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
...+.+.|.||++.. ..+ ..||+ |.+...|........ +...||+||..+.--.++++
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~----------~~~~CplCr~~~~~~~~~~P 76 (80)
T 2d8s_A 11 TPSSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSS----------DTRCCELCKYEFIMETKLSG 76 (80)
T ss_dssp CCTTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHH----------CCSBCSSSCCBCCCCCCSCC
T ss_pred CCCCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhC----------CCCCCCCCCCeeecCcccCC
Confidence 344567899999642 233 47996 999999998876543 12469999999876555543
No 172
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.58 E-value=0.0012 Score=55.41 Aligned_cols=49 Identities=20% Similarity=0.499 Sum_probs=38.5
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.-.|.||++....-+..+|||.+|..|...+-... ...||.||..|..-
T Consensus 18 ~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~-----------~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 18 KYECPICLMALREAVQTPCGHRFCKACIIKSIRDA-----------GHKCPVDNEILLEN 66 (170)
T ss_dssp GGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHH-----------CSBCTTTCCBCCGG
T ss_pred CCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhC-----------CCCCCCCccCcchh
Confidence 44699999877776778999999999998776433 12599999988763
No 173
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.49 E-value=0.00048 Score=53.62 Aligned_cols=47 Identities=32% Similarity=0.589 Sum_probs=1.3
Q ss_pred CCCCCcccccCcc------------------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 299 TCPDPCVVCLERK------------------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 299 ~~~d~C~vC~~~~------------------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
...|.|.||++.. |.++..+|||.|+..|........ ..||+||...
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~------------~~CP~Cr~~~ 110 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR------------QVCPLDNREW 110 (117)
T ss_dssp CCC--------------------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcC------------CcCCCCCCee
Confidence 3457899998643 233445899999999986654332 3499999873
No 174
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.47 E-value=0.005 Score=55.96 Aligned_cols=49 Identities=6% Similarity=-0.168 Sum_probs=38.7
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.-.|.||++-...-+..+|||.+|..|........ ...||+||.++..-
T Consensus 208 ~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~-----------~~~cP~~~~~~~~~ 256 (281)
T 2c2l_A 208 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRV-----------GHFNPVTRSPLTQE 256 (281)
T ss_dssp TTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT-----------CSSCTTTCCCCCGG
T ss_pred ccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC-----------CCCCcCCCCCCchh
Confidence 34699999988888889999999999997776443 12399999888643
No 175
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=96.45 E-value=0.0044 Score=45.30 Aligned_cols=47 Identities=6% Similarity=-0.168 Sum_probs=37.8
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.-.|.+|++-...-+..+|||.+|..|........ ..||+||..+..
T Consensus 14 ~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~------------~~cP~~~~~l~~ 60 (85)
T 2kr4_A 14 EFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNS------------PTDPFNRQMLTE 60 (85)
T ss_dssp TTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHC------------SBCTTTCCBCCG
T ss_pred heECcccCchhcCCeECCCCCEECHHHHHHHHhcC------------CCCCCCcCCCCh
Confidence 45699999987777888999999999998776532 349999987654
No 176
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=96.40 E-value=0.005 Score=46.53 Aligned_cols=47 Identities=9% Similarity=-0.147 Sum_probs=37.7
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
.-.|.+|++-...-+..+|||.+|..|....... ...||+||..+..
T Consensus 29 ~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~------------~~~cP~~~~~l~~ 75 (100)
T 2kre_A 29 EFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN------------SPTDPFNRQTLTE 75 (100)
T ss_dssp TTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS------------CSBCSSSCCBCCT
T ss_pred hhCCcCccCcccCCeECCCCCEEchHHHHHHHHc------------CCCCCCCCCCCCh
Confidence 4569999998877788899999999999777542 1359999988764
No 177
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.26 E-value=0.0048 Score=45.61 Aligned_cols=39 Identities=23% Similarity=0.573 Sum_probs=30.9
Q ss_pred EEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 315 AAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 315 ~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
-.+||+|.+|-.|+....... ...||.||.+|.++...|
T Consensus 16 RmIPCkHvFCydCa~~~~~~~-----------~k~Cp~C~~~V~rVe~~~ 54 (101)
T 3vk6_A 16 RMIPCKHVFCYDCAILHEKKG-----------DKMCPGCSDPVQRIEQCT 54 (101)
T ss_dssp EEETTCCEEEHHHHHHHHHTT-----------CCBCTTTCCBCSEEEEEE
T ss_pred eeccccccHHHHHHHHHHhcc-----------CCCCcCcCCeeeeeEEec
Confidence 668999999999997765333 345999999999986653
No 178
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.07 E-value=0.0084 Score=45.09 Aligned_cols=47 Identities=6% Similarity=-0.092 Sum_probs=37.7
Q ss_pred CCCcccccCccceEEEeCCC-cccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCD-HEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cg-H~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~ 359 (420)
+-.|.||++-...-+..+|| |.+|..|........ ..||+||..+..
T Consensus 22 ~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~~------------~~cP~~~~~l~~ 69 (98)
T 1wgm_A 22 EFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSD------------QTDPFNRSPLTM 69 (98)
T ss_dssp TTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTS------------CBCTTTCSBCCT
T ss_pred hcCCcCccccccCCeECCCCCeEECHHHHHHHHHhC------------CCCCCCCCCCCh
Confidence 45699999988777888999 999999997775431 259999988764
No 179
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.0058 Score=54.08 Aligned_cols=49 Identities=14% Similarity=0.238 Sum_probs=37.7
Q ss_pred CCCcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCC--Ccccccc
Q 014696 301 PDPCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPL--CRHGIVS 359 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~--CR~~I~~ 359 (420)
.-.|.+|++....-+.. .|||.+|..|........ +...||+ ||..+..
T Consensus 181 el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~----------~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 181 ELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGY----------TTRDCPQAACSQVVSM 232 (267)
T ss_dssp CSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTC----------SCEECSGGGCSCEECG
T ss_pred eeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhC----------CCCCCCcccccCcCch
Confidence 34599999988777764 999999999998876432 2356999 9987643
No 180
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=95.38 E-value=0.012 Score=49.27 Aligned_cols=49 Identities=8% Similarity=-0.126 Sum_probs=38.0
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.-.|.+|++-...-+..+|||.+|..|........ +. .||+||..+..-
T Consensus 106 ~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~----------~~-tcP~t~~~l~~~ 154 (179)
T 2f42_A 106 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRV----------GH-FDPVTRSPLTQD 154 (179)
T ss_dssp GGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT----------CS-BCTTTCCBCCGG
T ss_pred hhcccCccccCCCCeECCCCCEECHHHHHHHHHhC----------CC-CCCCCcCCCChh
Confidence 44689999877777888999999999998776543 11 499999877543
No 181
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.67 E-value=0.05 Score=38.32 Aligned_cols=56 Identities=14% Similarity=0.346 Sum_probs=37.8
Q ss_pred CCCCCCCCCCCcccccCccc-eEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 293 NSDSLSTCPDPCVVCLERKC-TVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 293 ~~~~~~~~~d~C~vC~~~~~-~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
....+....+.|.||.+-.- .+....|+|.+-..|......+. ....||+||+...
T Consensus 7 ~~~~y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~----------~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 7 GRETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSN----------AEPRCPHCNDYWP 63 (74)
T ss_dssp CCCCCSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTC----------SSCCCTTTCSCCC
T ss_pred chhhccCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhc----------CCCCCCCCcCcCC
Confidence 33445566788999986331 11233799999999997776433 1245999997765
No 182
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.59 E-value=0.048 Score=40.49 Aligned_cols=50 Identities=16% Similarity=0.337 Sum_probs=36.8
Q ss_pred CCCcccccCccceEEEeC-CCcccchhhHHHHhhcCCCcccccCCCCCCCCCC--Cccc
Q 014696 301 PDPCVVCLERKCTVAAKG-CDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPL--CRHG 356 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~-cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~--CR~~ 356 (420)
.-.|.||++-...-+..+ |||.+|..|...+..... +..+...||+ |+..
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~------~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQ------KRKKKAYCPQIGCSHT 59 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHH------TTTCCBCCCSTTCCCC
T ss_pred EeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHcc------CcCCCCCCCcCcCccc
Confidence 446999998777778885 999999999988775431 0112456999 9866
No 183
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=92.25 E-value=0.073 Score=48.87 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=34.4
Q ss_pred CCCCcccccCccce------EEE--eCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccc
Q 014696 300 CPDPCVVCLERKCT------VAA--KGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIV 358 (420)
Q Consensus 300 ~~d~C~vC~~~~~~------v~~--~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~ 358 (420)
....|.||++..-. ..+ ..|||.+...|......+....-++ -......||+||++|.
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqS-Fnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTF-LEVSFGQCPFCKAKLS 372 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCT-TTCCEEECTTTCCEEE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCcccc-ccccCCCCCCCCCcCC
Confidence 45679999964433 222 2699999999987765432100000 0011234999999875
No 184
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=90.08 E-value=0.36 Score=34.98 Aligned_cols=55 Identities=20% Similarity=0.433 Sum_probs=39.1
Q ss_pred CCCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccCC
Q 014696 298 STCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLPG 365 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~~ 365 (420)
.....-|..||-..-..+. -..|..|.+|+-.+-+.. .+||+|..++-.-.+++.
T Consensus 25 ~~G~~nCKsCWf~~k~LV~-C~dHYLCl~CLtlmL~~S------------drCpIC~~pLPtkl~~~~ 79 (99)
T 2ko5_A 25 HLGPQFCKSCWFENKGLVE-CNNHYLCLNCLTLLLSVS------------NRCPICKMPLPTKLRPSA 79 (99)
T ss_dssp CSCCCCCCSSCSCCSSEEE-CSSCEEEHHHHHHTCSSS------------SEETTTTEECCCCSCTTT
T ss_pred ccCcccChhhccccCCeee-ecchhhHHHHHHHHHhhc------------cCCcccCCcCCcceecCc
Confidence 3446679999976655554 678999999996665443 459999988766555443
No 185
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=89.11 E-value=0.22 Score=33.41 Aligned_cols=48 Identities=15% Similarity=0.320 Sum_probs=30.6
Q ss_pred CCCCcccccCccceEEEeCCCc-----ccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDH-----EFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH-----~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
+.+.|.||++..-.-...||.+ .+-..|+....... +...||+||...
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~----------~~~~C~~C~~~~ 57 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTIS----------RNTACQICGVVY 57 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHH----------TCSBCTTTCCBC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhC----------CCCccCCCCCee
Confidence 4567999986533323467543 46667777766443 235699999765
No 186
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=84.33 E-value=0.79 Score=30.70 Aligned_cols=46 Identities=7% Similarity=-0.024 Sum_probs=34.3
Q ss_pred CcccccCccceEEEe-CCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccc
Q 014696 303 PCVVCLERKCTVAAK-GCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSF 360 (420)
Q Consensus 303 ~C~vC~~~~~~v~~~-~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~ 360 (420)
.|.+|++-.-.-+.. ++||.++..|....-.... .||++|..+..-
T Consensus 5 ~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~------------~cP~t~~~L~~~ 51 (61)
T 2bay_A 5 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTG------------NDPITNEPLSIE 51 (61)
T ss_dssp CCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHS------------BCTTTCCBCCGG
T ss_pred EecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCC------------CCcCCcCCCChh
Confidence 577777766666666 8999999999988764331 299999877544
No 187
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=79.35 E-value=1.6 Score=29.36 Aligned_cols=32 Identities=25% Similarity=0.561 Sum_probs=26.5
Q ss_pred CCCCcccccCccceEEEeCC-CcccchhhHHHHh
Q 014696 300 CPDPCVVCLERKCTVAAKGC-DHEFCTQCALYLC 332 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~c-gH~~C~~C~~~lc 332 (420)
+...|.||.+. +++-..+| |-.+|.+|++..-
T Consensus 7 e~pWC~ICneD-AtlrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 7 GLPWCCICNED-ATLRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp CCSSCTTTCSC-CCEEETTTTSEEECSSHHHHHT
T ss_pred CCCeeEEeCCC-CeEEecCCCCceehHHHHHHHc
Confidence 34579999998 78999999 6669999998775
No 188
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=74.87 E-value=8.1 Score=26.14 Aligned_cols=49 Identities=18% Similarity=0.374 Sum_probs=34.9
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
..+.|.+|.+..-.+....|...+...|.. ......|.+.=.||.|+..
T Consensus 11 ~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~--------P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 11 PGARCGVCGDGTDVLRCTHCAAAFHWRCHF--------PAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TTCCCTTTSCCTTCEECSSSCCEECHHHHC--------TTTCCCCSSSCCCTTTTTC
T ss_pred CCCCcCCCCCCCeEEECCCCCCceecccCC--------CccCcCCCCCEECccccCC
Confidence 346799999888888888888888888871 1223345556679999753
No 189
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=63.36 E-value=0.13 Score=33.60 Aligned_cols=34 Identities=29% Similarity=0.705 Sum_probs=21.7
Q ss_pred CCCCCCcccccCccceEEEeCCCcccchhhHHHHhhcC
Q 014696 298 STCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTN 335 (420)
Q Consensus 298 ~~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~ 335 (420)
..+...|.+|.. +-+|.++|| .|.-|....|+.+
T Consensus 6 ~~d~~~C~iC~K---TKFADG~Gh-~C~yCk~r~CaRC 39 (62)
T 2a20_A 6 KGDAPTCGICHK---TKFADGCGH-NCSYCQTKFCARC 39 (62)
T ss_dssp SSCCCCCSSSSC---SCCCSSCCE-EBTTTCCEECTTS
T ss_pred cCCcchhhhhcc---ceeccCCCc-cccccCCeeeccc
Confidence 345678999987 448889999 3444444444333
No 190
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=61.07 E-value=4.9 Score=24.91 Aligned_cols=25 Identities=24% Similarity=0.598 Sum_probs=19.6
Q ss_pred CCCCCCCccccccccccCCCCCccc
Q 014696 347 SIPCPLCRHGIVSFDKLPGTRPIKE 371 (420)
Q Consensus 347 ~~~CP~CR~~I~~~~~~~~~~~~~~ 371 (420)
.+.||+|-=.|.--++.|...-+|.
T Consensus 23 ~IrCpyCGyrii~KvR~p~vK~vkA 47 (48)
T 4ayb_P 23 GVRCPYCGYKIIFMVRKPTIKIVKA 47 (48)
T ss_dssp SSCCTTTCCSCEECCCCCSCEEEEC
T ss_pred CcccCccCcEEEEEecCCcceeeec
Confidence 4789999988888888887655554
No 191
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=58.91 E-value=11 Score=26.91 Aligned_cols=53 Identities=25% Similarity=0.538 Sum_probs=37.4
Q ss_pred CCCcccccCcc-------ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccccccccccC
Q 014696 301 PDPCVVCLERK-------CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGIVSFDKLP 364 (420)
Q Consensus 301 ~d~C~vC~~~~-------~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I~~~~~~~ 364 (420)
..+|.||.|.- ..|+..-|+-..|+.|..|--. .+...||-|...-.+...-|
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk-----------eG~q~CpqCktrYkr~kgsp 75 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR-----------EGTQNCPQCKTRYKRLRGSP 75 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH-----------TSCSSCTTTCCCCCCCTTCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHh-----------ccCccccccCCccccccCCC
Confidence 46899999852 4556667888899999866532 24667999997777654333
No 192
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=52.32 E-value=28 Score=28.69 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCc--------------
Q 014696 15 ASGERLVSAARDGDLQEAKALLEYNPRLVRYSTFGVRNSPLHYSAAQGHHEIVSLLIESGVDINLR-------------- 80 (420)
Q Consensus 15 ~~~~~L~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~iv~~Ll~~g~~v~~~-------------- 80 (420)
...+.+-.|+..|+++.+..+.+.-..... + +..=..|...|++++++.-..+--|++..
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~~~~~-----W-k~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLNDSIT-----W-ERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHCCHHH-----H-HHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhCCHHH-----H-HHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHH
Confidence 345689999999999999888764321111 1 23445677788888887766653333211
Q ss_pred --------cCCCCCHHHHHHHcCcH-HHHHHHHHcCCCCCccccCCCCh--HHHHHHHcCCHHHHHHHHHhc
Q 014696 81 --------NYRGQTALMQACQHGHW-EVVLTLILYKANIHRADYLNGGT--ALHLAALNGHSRCIRLLLADY 141 (420)
Q Consensus 81 --------d~~g~TpL~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~~g~t--pL~~A~~~g~~~iv~~Ll~~~ 141 (420)
..+...+++.+...|+. +++++|.+ .|+. +..+|..+|..++.+.+++..
T Consensus 81 kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~-----------~~r~~eA~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 81 KMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAE-----------GGSLPLAYAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH-----------TTCHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHH-----------CCChHHHHHHHHHcCcHHHHHHHHHHh
Confidence 11222344555455544 35555553 2333 456677788888888887653
No 193
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=51.56 E-value=12 Score=31.16 Aligned_cols=50 Identities=24% Similarity=0.472 Sum_probs=31.4
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..+.|.+|.+..-.+....|...+...|. .......|.+.=.||.|+..-
T Consensus 3 ~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~--------~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNGGELLCCEKCPKVFHLSCH--------VPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCCSSCEECSSSSCEECTTTS--------SSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCCCeeeecCCCCcccCcccc--------CCCCCCCCCCCEECccccCcc
Confidence 45789999877655566566655555553 223334445566799999653
No 194
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=47.02 E-value=16 Score=31.01 Aligned_cols=50 Identities=24% Similarity=0.436 Sum_probs=32.9
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHGI 357 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~I 357 (420)
..+.|.+|.+..-.+..-.|...+...|. .......|.+.=.||.|+..-
T Consensus 6 ~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl--------~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNGGDLLCCEKCPKVFHLTCH--------VPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCCEEEEECSSSSCEECTTTS--------SSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCceEEcCCCCCccCCccC--------CCCCCCCCCCCEEeCceeCcc
Confidence 35789999987766666667766666654 223334455666799999653
No 195
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=46.55 E-value=13 Score=27.25 Aligned_cols=30 Identities=17% Similarity=0.541 Sum_probs=23.8
Q ss_pred CCcccccC---ccceEEEeCCCcccchhhHHHH
Q 014696 302 DPCVVCLE---RKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 302 d~C~vC~~---~~~~v~~~~cgH~~C~~C~~~l 331 (420)
-.|.+|.+ ..+......|+|.+|..|....
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHHH
Confidence 46899985 3556677899999999999763
No 196
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=44.26 E-value=51 Score=30.92 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=17.4
Q ss_pred HHHcCCHHHHHHHHHhCCCccc
Q 014696 23 AARDGDLQEAKALLEYNPRLVR 44 (420)
Q Consensus 23 Aa~~g~~~~v~~Ll~~~~~~~~ 44 (420)
.+..||...|+..+..+.+.+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r 50 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIAR 50 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHcCChhHHHHHHhcCCchhc
Confidence 4568999999999988877654
No 197
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=43.19 E-value=39 Score=22.15 Aligned_cols=48 Identities=25% Similarity=0.576 Sum_probs=30.4
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
..+.|.+|.+..-.+....|-..+-..|.. . .....|.+.=.||.|+.
T Consensus 10 ~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~-------p-~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQGGEIILCDTCPRAYHMVCLD-------P-DMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCCSSEEECSSSSCEEEHHHHC-------T-TCCSCCCSSCCCTTGGG
T ss_pred CCCCCccCCCCCcEEECCCCChhhhhhccC-------C-CCCCCCCCceECccccc
Confidence 356799998876566666676666666661 1 12223455667999975
No 198
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.75 E-value=12 Score=24.25 Aligned_cols=49 Identities=22% Similarity=0.491 Sum_probs=26.2
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
...+.|.+|.+..-.+....|...+-..|. .......|.+.=.||.|+.
T Consensus 7 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl--------~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKSGQLLMCDTCSRVYHLDCL--------DPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCSSCCEECSSSSCEECSSSS--------SSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCCCeEEEcCCCCcceECccC--------CCCcCCCCCCceEChhhhC
Confidence 446789999876544444445444444443 1122233444556777754
No 199
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=41.70 E-value=20 Score=24.97 Aligned_cols=32 Identities=31% Similarity=0.645 Sum_probs=22.9
Q ss_pred CCCcccccCccceEEEeCC----CcccchhhHHHHh
Q 014696 301 PDPCVVCLERKCTVAAKGC----DHEFCTQCALYLC 332 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~c----gH~~C~~C~~~lc 332 (420)
.-.|.+|.++.-...++.| +|.+|..|.+..-
T Consensus 15 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sI 50 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESI 50 (93)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHH
T ss_pred eeEeecchhhhccCceeeCCCccCCeeeccccHHHH
Confidence 3458899887766544443 7789999997754
No 200
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=41.36 E-value=65 Score=31.27 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=16.6
Q ss_pred HHHHHHHcCCCCCccccCCCChHHHHHHHcCCHHHHHHHH
Q 014696 99 VVLTLILYKANIHRADYLNGGTALHLAALNGHSRCIRLLL 138 (420)
Q Consensus 99 iv~~Ll~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll 138 (420)
+.+.+.+.|..++... -.+.+...+..|+.+-+..++
T Consensus 92 lf~~M~~~G~~Pd~~t---yn~lI~~~~~~g~~~~A~~l~ 128 (501)
T 4g26_A 92 IFKQMIVDKVVPNEAT---FTNGARLAVAKDDPEMAFDMV 128 (501)
T ss_dssp HHHHHHHTTCCCCHHH---HHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHH---HHHHHHHHHhcCCHHHHHHHH
Confidence 4444445555444322 123344445555555544444
No 201
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=40.10 E-value=25 Score=23.14 Aligned_cols=49 Identities=20% Similarity=0.471 Sum_probs=26.5
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
..+.|.+|.+..-.+....|...+-..|. .......|.+.=.||.|+..
T Consensus 8 ~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl--------~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKDGGELLCCDTCPSSYHIHCL--------NPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCCCSSCBCCSSSCCCBCSSSS--------SSCCSSCCSSCCCCTTTTTT
T ss_pred CCCcCCCCCCCCCEEEcCCCCHHHccccc--------CCCcCcCCCCccCChhhcCc
Confidence 35679999875444444444443333333 22233344556679999753
No 202
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=39.75 E-value=33 Score=24.60 Aligned_cols=49 Identities=22% Similarity=0.451 Sum_probs=28.4
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
...+.|.+|.+..-.+....|-..+-..|. .......|.+.-.||.|+.
T Consensus 23 ~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl--------~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKPGDLVMCNQCEFCFHLDCH--------LPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSSSCCEECTTSSCEECTTSS--------STTCCCCCSSSCCCCSCCC
T ss_pred CCCCcCcCcCCCCCEEECCCCCCceecccC--------CCCCCCCcCCCcCCccccC
Confidence 345779999976544444444443333333 2333444556667999984
No 203
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=39.16 E-value=17 Score=30.27 Aligned_cols=48 Identities=23% Similarity=0.429 Sum_probs=27.7
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
.+.|.+|.+..-.+....|-..+...|. .......|.+.-.||.|+..
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl--------~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCH--------LPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTS--------TTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCCCceeECCCCCchhccccC--------CCCcccCCCCCCCCcCccCC
Confidence 4689999876543343344433333333 33344445566779999865
No 204
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=38.50 E-value=32 Score=29.81 Aligned_cols=46 Identities=17% Similarity=0.416 Sum_probs=29.8
Q ss_pred CCCcccccCccce-EEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 301 PDPCVVCLERKCT-VAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 301 ~d~C~vC~~~~~~-v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
...|.+|.+---. +.+..|+|.+-..|......+. +...||.|+..
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~----------~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSN----------AEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTC----------SSCBCTTTCCB
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhC----------CCCCCCCCCCC
Confidence 5678888752211 1222389999999997775432 23469999975
No 205
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=34.62 E-value=29 Score=20.39 Aligned_cols=20 Identities=25% Similarity=0.426 Sum_probs=15.6
Q ss_pred HHHHHHHHcCCHHHHHHHHH
Q 014696 18 ERLVSAARDGDLQEAKALLE 37 (420)
Q Consensus 18 ~~L~~Aa~~g~~~~v~~Ll~ 37 (420)
..++.|+..||++.++.|-.
T Consensus 15 QqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHH
Confidence 35778888899998888754
No 206
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=30.74 E-value=15 Score=24.10 Aligned_cols=49 Identities=22% Similarity=0.491 Sum_probs=28.6
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
..+.|.+|.+..-.+....|...+-..|. ..+....|.+.=.||.|+..
T Consensus 4 ~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl--------~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 4 HEDFCSVCRKSGQLLMCDTCSRVYHLDCL--------DPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCSSCTTTCCCSSCEECSSSSCEECGGGS--------SSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCcCCCCCCcEEEcCCCCcCEECCcC--------CCCcCCCCCCceEChhccCh
Confidence 35779999886655555566655555555 11222334455568888654
No 207
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.73 E-value=2.2e+02 Score=23.23 Aligned_cols=48 Identities=13% Similarity=0.073 Sum_probs=27.0
Q ss_pred ccHHHHHHHcCCHH-HHHHHHHhCCCccccccCCCCHHHHHHHcCchhHHHHhhhCC
Q 014696 208 STSLHYAACGGNAQ-CCQILIAMGASLTAENANGWTPLMVARSWHRTGLEDILSTQP 263 (420)
Q Consensus 208 ~TpLh~Aa~~g~~~-iv~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~i~~lL~~~~ 263 (420)
..+.+.+...|+.+ ++++|.+.|--. -+..+|..+|..++.+-+++..
T Consensus 93 n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 93 GSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLEQA 141 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHHHh
Confidence 45666666666654 556655543211 2455566777777766665443
No 208
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=30.42 E-value=23 Score=23.73 Aligned_cols=50 Identities=26% Similarity=0.580 Sum_probs=27.4
Q ss_pred CCCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 299 TCPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 299 ~~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
...+.|.+|.+..-.+....|...+-..|. ..+....|.+.=.||.|+..
T Consensus 6 ~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl--------~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDGGELICCDGCPRAFHLACL--------SPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCCSSCEECSSCCCEECTTTS--------SSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCCCCEEEcCCCChhhccccc--------CCCcCcCCCCCeECccccCc
Confidence 345789999886555555555544434443 11222334455568888643
No 209
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=28.33 E-value=20 Score=27.48 Aligned_cols=28 Identities=21% Similarity=0.673 Sum_probs=17.1
Q ss_pred CCCcccccCccceE----EEeCCCcccchhhH
Q 014696 301 PDPCVVCLERKCTV----AAKGCDHEFCTQCA 328 (420)
Q Consensus 301 ~d~C~vC~~~~~~v----~~~~cgH~~C~~C~ 328 (420)
...|..|......+ ....||..+|..|.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs 50 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCS 50 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGE
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHh
Confidence 35788887765433 33457777777665
No 210
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=28.30 E-value=23 Score=28.04 Aligned_cols=55 Identities=18% Similarity=0.444 Sum_probs=36.3
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
..+.|.+|.+..-.+....|-..+|..|....-.......+ ..+.+.=.||.|+.
T Consensus 62 ~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i-~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTI-MDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHH-HTSTTCCCCTTTCC
T ss_pred CCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhc-ccCCCCCEeecccC
Confidence 35789999999988888889999999999654321100000 01223345999983
No 211
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=27.75 E-value=23 Score=27.53 Aligned_cols=32 Identities=25% Similarity=0.615 Sum_probs=26.9
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
..+.|.+|.+..-.+....|-..+|..|....
T Consensus 56 ~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~ 87 (129)
T 3ql9_A 56 MDEQCRWCAEGGNLICCDFCHNAFCKKCILRN 87 (129)
T ss_dssp CBSSCTTTCCCSEEEECSSSSCEEEHHHHHHH
T ss_pred CCCcCeecCCCCeeEecCCCchhhhHHHhCCC
Confidence 35679999998888777789888999999764
No 212
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=25.54 E-value=49 Score=32.13 Aligned_cols=150 Identities=20% Similarity=0.162 Sum_probs=82.7
Q ss_pred HHHHHHcCCHHHHHHHHHh----CCCcccccCCCCCCcHHHHHHHc-Cc-------------HHHHHHHHHcCCCCCCcc
Q 014696 20 LVSAARDGDLQEAKALLEY----NPRLVRYSTFGVRNSPLHYSAAQ-GH-------------HEIVSLLIESGVDINLRN 81 (420)
Q Consensus 20 L~~Aa~~g~~~~v~~Ll~~----~~~~~~~~~~~~g~t~Lh~Aa~~-g~-------------~~iv~~Ll~~g~~v~~~d 81 (420)
|..-++.|+++.+..+++. |...+... .+.|..|+.. +. .++.+.+.+.|..+|...
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t-----yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t 107 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYH-----YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 107 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH-----HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH-----HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH
Confidence 3444578998887777653 43222211 2344444432 21 356666677888777654
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCccccCCCChHHHHHHHcCCHHHHHHHHHhcCCCChhhHHHHhhhcc
Q 014696 82 YRGQTALMQACQHGHWEVVLTLI----LYKANIHRADYLNGGTALHLAALNGHSRCIRLLLADYIPSVPNAWNRLRKKSN 157 (420)
Q Consensus 82 ~~g~TpL~~A~~~g~~~iv~~Ll----~~ga~~~~~~~~~g~tpL~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 157 (420)
. .+.+...++.|+.+-+..++ +.|..++... -.+.|...+..|..+-+..+++.- .
T Consensus 108 y--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t---yn~lI~~~~~~g~~~~A~~l~~~M-----------~---- 167 (501)
T 4g26_A 108 F--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS---YGPALFGFCRKGDADKAYEVDAHM-----------V---- 167 (501)
T ss_dssp H--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH---HHHHHHHHHHTTCHHHHHHHHHHH-----------H----
T ss_pred H--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce---ehHHHHHHHHCCCHHHHHHHHHHH-----------H----
Confidence 2 24555667788876554444 4566665432 234455567888887776666431 0
Q ss_pred CCCCchhcccccchhhHHHHH-HhcCCHHHHHHHHH----cCCCcc
Q 014696 158 KTGSILEFDERYFHLEVLLHL-TLNGHVESVQLLLD----LGASVS 198 (420)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~l~a-a~~g~~~~v~~Ll~----~ga~~~ 198 (420)
............+++.+ +..|+.+-+..+++ .|..++
T Consensus 168 ----~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 168 ----ESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp ----HTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred ----hcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 00111222344566777 88888766555543 466555
No 213
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=23.97 E-value=24 Score=25.05 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=18.8
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
+...|.||.+...-. .-|-..|..|.-..
T Consensus 3 ~~~~C~VCg~~a~g~---hyGv~sC~aCk~FF 31 (84)
T 1hcq_A 3 ETRYCAVCNDYASGY---HYGVWSCEGCKAFF 31 (84)
T ss_dssp CCCBCTTTCSBCCEE---ETTEEECHHHHHHH
T ss_pred CCCcCcEECCCCCCe---eeCccchHHhhhhh
Confidence 346899999865332 33555788888653
No 214
>2lze_A A primordial catalytic fold generated by in vitro evolution; ligase, de novo protein; NMR {Synthetic construct}
Probab=23.19 E-value=41 Score=24.03 Aligned_cols=45 Identities=18% Similarity=0.276 Sum_probs=24.6
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCc
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCR 354 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR 354 (420)
...|.||.|....+- .. .+=..+.|...+.+.+... ....|+.||
T Consensus 17 ~h~c~vCgd~asfFR------Rt-~~~~~y~C~~~~~C~i~~~--~R~~C~~CR 61 (87)
T 2lze_A 17 KHICAICGNNAEDYK------HT-DMDLTYTDRDYKNCESYHK--CSDLCQYCR 61 (87)
T ss_dssp SSSCSSSSSSSSSCT------TT-TTSCTTTSCCCCCCCCSSC--CSSSCSGGG
T ss_pred CEEccCCCCccceEC------cc-cCCCeeEcCCCCccccCCC--ccCcCCccc
Confidence 456999988655431 11 1112334544455555443 456799998
No 215
>2ebl_A COUP transcription factor 1; DNA-binding, metal-binding, nuclear protein, receptor, transcription regulation, zinc, EAR3, erbal3 tfcoup1; NMR {Homo sapiens}
Probab=22.04 E-value=66 Score=23.03 Aligned_cols=28 Identities=21% Similarity=0.502 Sum_probs=18.1
Q ss_pred CCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 301 PDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 301 ~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
...|.||.+...-. .-|-..|..|.-..
T Consensus 7 ~~~C~VCg~~a~g~---hyGv~sC~aCk~FF 34 (89)
T 2ebl_A 7 GIECVVCGDKSSGK---HYGQFTCEGCKSFF 34 (89)
T ss_dssp SCBCTTTCSBCCSE---ETTEECCHHHHHHH
T ss_pred CCCCcEeCCCCcce---EeCchhhHHhhhhh
Confidence 46799999854322 23455788888654
No 216
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=21.47 E-value=36 Score=22.68 Aligned_cols=15 Identities=27% Similarity=0.536 Sum_probs=11.6
Q ss_pred CCCCCCCCccccccc
Q 014696 346 GSIPCPLCRHGIVSF 360 (420)
Q Consensus 346 ~~~~CP~CR~~I~~~ 360 (420)
..+.||.|...|.==
T Consensus 37 ~~iRC~~CG~RILyK 51 (63)
T 3h0g_L 37 EVIRCRECGHRVMYK 51 (63)
T ss_dssp SCCCCSSSCCCCCBC
T ss_pred CceECCCCCcEEEEE
Confidence 458899999988643
No 217
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=21.17 E-value=20 Score=18.89 Aligned_cols=11 Identities=27% Similarity=0.893 Sum_probs=7.9
Q ss_pred CCCCCCCCccc
Q 014696 346 GSIPCPLCRHG 356 (420)
Q Consensus 346 ~~~~CP~CR~~ 356 (420)
-...||+|.+.
T Consensus 5 f~vqcpvcqq~ 15 (29)
T 3vhs_A 5 FQVQCPVCQQM 15 (29)
T ss_dssp CEEECTTTCCE
T ss_pred eeeeChHHHHh
Confidence 34679999864
No 218
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=20.81 E-value=80 Score=22.47 Aligned_cols=48 Identities=17% Similarity=0.424 Sum_probs=28.3
Q ss_pred CCCCCcccccCcc-----ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCccc
Q 014696 299 TCPDPCVVCLERK-----CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRHG 356 (420)
Q Consensus 299 ~~~d~C~vC~~~~-----~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~~ 356 (420)
...+.|.+|.+.. -.+....|.-.+-..|. .+.. .|.+.=.||.|+..
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl-------~p~~---vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECY-------GVPY---IPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHH-------TCSS---CCSSCCCCHHHHHH
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccC-------CCCc---cCCCceECccccCc
Confidence 3457899999765 45555566655555665 1111 23345568888643
No 219
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.49 E-value=2.3e+02 Score=26.63 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=18.1
Q ss_pred HHHHcCcHHHHHHHHHcCCCCCC
Q 014696 57 YSAAQGHHEIVSLLIESGVDINL 79 (420)
Q Consensus 57 ~Aa~~g~~~iv~~Ll~~g~~v~~ 79 (420)
..+..|+..-|+..+..|.|++.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r 50 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIAR 50 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTC
T ss_pred HHHHcCChhHHHHHHhcCCchhc
Confidence 35567999999998888877664
No 220
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=20.30 E-value=83 Score=21.36 Aligned_cols=49 Identities=18% Similarity=0.428 Sum_probs=29.7
Q ss_pred CCCCCCCcccccCcc-----ceEEEeCCCcccchhhHHHHhhcCCCcccccCCCCCCCCCCCcc
Q 014696 297 LSTCPDPCVVCLERK-----CTVAAKGCDHEFCTQCALYLCSTNSSCVVAKGPIGSIPCPLCRH 355 (420)
Q Consensus 297 ~~~~~d~C~vC~~~~-----~~v~~~~cgH~~C~~C~~~lc~~~~~~~~~~~~~~~~~CP~CR~ 355 (420)
.....+.|.+|.+.. -.+..-.|...+-..|. .... .|.+.=.||.|+.
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl-------~~~~---vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECY-------GVPY---IPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHH-------TCSS---CCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccC-------CCCc---CCCCCcCCccCcC
Confidence 345567899998654 45566667666666666 1111 2344556888864
No 221
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=20.22 E-value=49 Score=23.30 Aligned_cols=28 Identities=21% Similarity=0.511 Sum_probs=15.9
Q ss_pred CCCcccccCccceE----EEeCCCcccchhhH
Q 014696 301 PDPCVVCLERKCTV----AAKGCDHEFCTQCA 328 (420)
Q Consensus 301 ~d~C~vC~~~~~~v----~~~~cgH~~C~~C~ 328 (420)
...|..|......+ ....||+.+|..|.
T Consensus 21 ~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs 52 (84)
T 1z2q_A 21 APACNGCGCVFTTTVRRHHCRNCGYVLCGDCS 52 (84)
T ss_dssp CCBCTTTCCBCCTTSCCEECTTTCCEECTGGG
T ss_pred CCCCcCcCCccccchhcccccCCCcEEChHHh
Confidence 45688887764332 23336666666554
No 222
>1dsz_B RXR-alpha, retinoic acid receptor RXR-alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1by4_A* 1rxr_A 1r0n_A 1r0o_A 2nll_A*
Probab=20.22 E-value=37 Score=24.16 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=17.6
Q ss_pred CCCCcccccCccceEEEeCCCcccchhhHHHH
Q 014696 300 CPDPCVVCLERKCTVAAKGCDHEFCTQCALYL 331 (420)
Q Consensus 300 ~~d~C~vC~~~~~~v~~~~cgH~~C~~C~~~l 331 (420)
....|.||.+..... .-|-..|..|.-..
T Consensus 4 ~~~~C~VCg~~a~g~---hyGv~sC~aCk~FF 32 (85)
T 1dsz_B 4 TKHICAICGDRSSGK---HYGVYSCEGCKGFF 32 (85)
T ss_dssp CCEECTTTCCEESSE---ETTEECCHHHHHHH
T ss_pred CCCCCCEeCCCCCce---eeCccchHHHHHHH
Confidence 345799998844222 23444788887543
No 223
>2nll_B Protein (thyroid hormone receptor); complex (transcription regulation/DNA), DNA-binding, nuclear protein, zinc- finger, multigene family; HET: DNA 5IU; 1.90A {Homo sapiens} SCOP: g.39.1.2 PDB: 3m9e_A*
Probab=20.12 E-value=24 Score=26.23 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=16.5
Q ss_pred CCcccccCccceEEEeCCCcccchhhHHH
Q 014696 302 DPCVVCLERKCTVAAKGCDHEFCTQCALY 330 (420)
Q Consensus 302 d~C~vC~~~~~~v~~~~cgH~~C~~C~~~ 330 (420)
..|.||.+..... .-|-..|..|.-.
T Consensus 2 ~~C~VCgd~a~g~---hyGv~sC~aCk~F 27 (103)
T 2nll_B 2 ELCVVCGDKATGY---HYRCITCEGCKGF 27 (103)
T ss_dssp CBCTTTCSBCCSE---ETTEECCHHHHHH
T ss_pred CCCeEeCCcCcCe---ecCcccHHHhhhh
Confidence 4799998854322 2345578888754
Done!